| Species latin name | reference numbers of v1 | reference numbers of v2 | Maximum of genes | Maximum coverage of GO |
| Acromyrmex echinatior | 0 | 1 | 4134 | 7334 |
| Acropora digitifera | 0 | 1 | 191 | 93 |
| Actinidia chinensis | 0 | 1 | 700 | 262 |
| Acyrthosiphon pisum | 2 | 0 | 7214 | 8864 |
| Adineta vaga | 0 | 1 | 591 | 439 |
| Aedes aegypti | 1 | 1 | 4412 | 10451 |
| Aegilops tauschii | 0 | 2 | 6043 | 22357 |
| Ailuropoda melanoleuca | 0 | 1 | 17584 | 28409 |
| Alligator mississippiensis | 0 | 1 | 15490 | 22720 |
| Alligator sinensis | 0 | 1 | 402 | 71 |
| Allium cepa | 1 | 0 | 4977 | 2933 |
| Amaranthus hypochondriacus | 0 | 1 | 3118 | 11675 |
| Amblyomma variegatum | 0 | 1 | 1588 | 462 |
| Amborella trichopoda | 0 | 4 | 7494 | 17032 |
| Amphimedon queenslandica | 0 | 1 | 3981 | 15179 |
| Ananas comosus | 0 | 1 | 3097 | 11687 |
| Anas platyrhynchos | 0 | 1 | 16360 | 22240 |
| Anolis carolinensis | 0 | 1 | 17240 | 16817 |
| Anopheles albimanus | 0 | 1 | 3791 | 7240 |
| Anopheles arabiensis | 0 | 1 | 3808 | 7795 |
| Anopheles atroparvus | 0 | 1 | 3734 | 7768 |
| Anopheles christyi | 0 | 1 | 3629 | 6705 |
| Anopheles coluzzii | 0 | 1 | 3772 | 7775 |
| Anopheles culicifacies A | 0 | 1 | 3741 | 8156 |
| Anopheles darlingi | 0 | 2 | 4040 | 7437 |
| Anopheles dirus | 0 | 1 | 3739 | 7599 |
| Anopheles epiroticus | 0 | 1 | 3773 | 7625 |
| Anopheles farauti | 0 | 1 | 3760 | 7556 |
| Anopheles gambiae | 0 | 2 | 5104 | 8913 |
| Anopheles maculatus | 0 | 1 | 3640 | 8135 |
| Anopheles melas | 0 | 1 | 3732 | 8562 |
| Anopheles merus | 0 | 1 | 3625 | 7417 |
| Anopheles minimus | 0 | 1 | 3771 | 7526 |
| Anopheles quadriannulatus | 0 | 1 | 3776 | 7767 |
| Anopheles sinensis | 0 | 1 | 3733 | 7174 |
| Anopheles sinensis China | 0 | 1 | 3642 | 7754 |
| Anopheles stephensi | 0 | 2 | 3781 | 7646 |
| Anthracocystis flocculosa | 2 | 0 | 2587 | 2760 |
| Aphis gossypii | 0 | 1 | 5442 | 1692 |
| Apis mellifera | 0 | 1 | 7582 | 2327 |
| Aquilegia | 0 | 1 | 4398 | 5889 |
| Aquilegia coerulea | 0 | 1 | 3161 | 12792 |
| Arabidopsis halleri | 0 | 1 | 3202 | 13198 |
| Arabidopsis lyrata | 0 | 3 | 8225 | 25413 |
| Arabidopsis thaliana | 15 | 5 | 8939 | 58367 |
| Arachis duranensis | 0 | 1 | 3262 | 19260 |
| Arachis hypogaea | 6 | 1 | 8218 | 869 |
| Arachis ipaensis | 0 | 1 | 3247 | 21153 |
| Ascaris suum | 0 | 1 | 3827 | 13268 |
| Aspergillus flavus | 0 | 1 | 3973 | 597 |
| Aspergillus nidulans | 0 | 1 | 4875 | 795 |
| Astatotilapia burtoni | 0 | 1 | 4399 | 994 |
| Astyanax mexicanus | 0 | 1 | 7975 | 17904 |
| Atta cephalotes | 0 | 1 | 187 | 50 |
| Aureococcus anophagefferens | 0 | 1 | 2441 | 6932 |
| Bathycoccus prasinos | 0 | 1 | 2444 | 4065 |
| Beta vulgaris | 0 | 2 | 7869 | 18137 |
| Betula nana | 0 | 1 | 7241 | 10527 |
| Bigelowiella natans | 0 | 1 | 820 | 456 |
| Biomphalaria glabrata | 0 | 1 | 3423 | 6968 |
| Blumeria graminis | 1 | 0 | 5765 | 4373 |
| Boechera stricta | 0 | 1 | 3199 | 13952 |
| Bombyx mori | 8 | 1 | 2595 | 7271 |
| Boophilus microplus | 0 | 1 | 5482 | 1251 |
| Bos grunniens | 0 | 1 | 1758 | 492 |
| Bos taurus | 10 | 2 | 19723 | 45151 |
| Brachypodium distachyon | 7 | 5 | 6840 | 31222 |
| Brachypodium stacei | 0 | 1 | 3160 | 13828 |
| Branchiostoma floridae | 0 | 1 | 7130 | 19192 |
| Brassica juncea | 6 | 0 | 0 | 310 |
| Brassica napus | 8 | 1 | 6887 | 33454 |
| Brassica oleracea | 6 | 0 | 5548 | 33322 |
| Brassica rapa | 6 | 4 | 7680 | 33345 |
| Brugia malayi | 0 | 1 | 1838 | 244 |
| Caenorhabditis elegans | 0 | 1 | 4478 | 3518 |
| Cajanus cajan | 0 | 1 | 7956 | 22209 |
| Callithrix jacchus | 0 | 1 | 17541 | 42717 |
| Callorhinchus milii | 0 | 1 | 5476 | 15135 |
| Camelus bactrianus ferus | 0 | 1 | 6051 | 13216 |
| Camponotus floridanus | 0 | 1 | 4274 | 8184 |
| Canis familiaris | 0 | 2 | 19638 | 45429 |
| Cannabis sativa | 0 | 2 | 4674 | 16199 |
| Capitella teleta | 0 | 1 | 1648 | 935 |
| Capra hircus | 0 | 1 | 3365 | 2197 |
| Capsella grandiflora | 0 | 1 | 3159 | 13221 |
| Capsella rubella | 0 | 2 | 7746 | 22565 |
| Capsicum annuum | 7 | 1 | 5694 | 8650 |
| Carica papaya | 1 | 3 | 7676 | 18588 |
| Catharanthus roseus | 0 | 1 | 7319 | 14527 |
| Cavia porcellus | 0 | 1 | 17494 | 17705 |
| Chelonia mydas | 0 | 1 | 5635 | 12074 |
| Chlamydomonas reinhardtii | 1 | 6 | 6611 | 10207 |
| Chlorella variabilis NC64A | 0 | 1 | 2605 | 5388 |
| Chlorocebus sabaeus | 0 | 1 | 6458 | 14220 |
| Choloepus hoffmanni | 0 | 1 | 580 | 66 |
| Chrysemys picta bellii | 0 | 1 | 199 | 21 |
| Cicer arietinum | 0 | 1 | 8215 | 37231 |
| Cimex lectularius | 0 | 1 | 4201 | 8487 |
| Ciona intestinalis | 0 | 1 | 7382 | 6971 |
| Ciona savignyi | 0 | 1 | 3951 | 13164 |
| Citrullus lanatus | 0 | 1 | 7529 | 17088 |
| Citrus clementina | 0 | 2 | 6003 | 13872 |
| Citrus sinensis | 1 | 3 | 7593 | 21315 |
| Coccidioides immitis | 0 | 1 | 1767 | 259 |
| Coccidioides posadasii | 0 | 1 | 5665 | 1491 |
| Coccomyxa subellipsoidea C-169 | 0 | 2 | 2749 | 5071 |
| Coffea canephora | 1 | 1 | 5532 | 14975 |
| Columba livia | 0 | 1 | 3409 | 2810 |
| Crassostrea gigas | 0 | 1 | 4492 | 14933 |
| Cricetulus griseus | 0 | 1 | 7087 | 16955 |
| Crocodylus porosus | 0 | 1 | 13703 | 10248 |
| Cryptococcus neoformans | 0 | 1 | 5398 | 1187 |
| Cryptosporidium parvum | 0 | 1 | 3645 | 617 |
| Cucumis melo | 0 | 1 | 7554 | 17995 |
| Cucumis sativus | 8 | 1 | 3135 | 17309 |
| Culex quinquefasciatus | 0 | 1 | 4296 | 12510 |
| Cyanidioschyzon merolae | 0 | 3 | 4296 | 3589 |
| Danaus plexippus | 0 | 1 | 4096 | 9369 |
| Danio rerio | 1 | 1 | 3579 | 26343 |
| Daphnia pulex | 0 | 1 | 6563 | 14467 |
| Dasypus novemcinctus | 0 | 1 | 3452 | 391 |
| Daubentonia madagascariensis | 0 | 1 | 406 | 145 |
| Daucus carota | 0 | 1 | 2088 | 12160 |
| Dendrobium catenatum | 0 | 1 | 636 | 225 |
| Dendroctonus ponderosae | 0 | 1 | 5770 | 2916 |
| Dianthus caryophyllus | 0 | 1 | 1306 | 166 |
| Dictyostelium discoideum | 0 | 1 | 2887 | 582 |
| Dipodomys ordii | 0 | 1 | 233 | 35 |
| Drosophila melanogaster | 0 | 1 | 8712 | 14343 |
| Dunaliella salina | 0 | 1 | 2756 | 4858 |
| Echinops telfairi | 0 | 1 | 1749 | 78 |
| Ectocarpus siliculosus | 0 | 2 | 3921 | 6945 |
| Eimeria tenella | 0 | 1 | 3006 | 334 |
| Elaeis guineensis | 0 | 1 | 1144 | 634 |
| Emiliania huxleyi | 0 | 1 | 3339 | 16797 |
| Equus caballus | 1 | 0 | 14455 | 39245 |
| Erinaceus europaeus | 0 | 1 | 1731 | 117 |
| Eucalyptus grandis | 0 | 2 | 7627 | 28393 |
| Euphorbia esula | 0 | 1 | 5748 | 6705 |
| Eutrema salsugineum | 0 | 1 | 3184 | 13959 |
| Fabaceae | 6 | 1 | 6105 | 7905 |
| Fagopyrum esculentum Moench | 0 | 1 | 348 | 41901 |
| Falco cherrug | 0 | 1 | 323 | 182 |
| Falco peregrinus | 0 | 1 | 372 | 101 |
| Felis catus | 0 | 2 | 18932 | 18987 |
| Festuca arundinacea | 0 | 1 | 5942 | 6670 |
| Festuca pratensis | 0 | 1 | 5802 | 7007 |
| Ficedula albicollis | 0 | 1 | 16480 | 13560 |
| Filobasidiella neoformans | 0 | 1 | 1847 | 703 |
| Fragaria vesca | 1 | 1 | 7592 | 23753 |
| Fragilariopsis cylindrus | 0 | 1 | 3428 | 8353 |
| Fundulus heteroclitus | 0 | 1 | 5348 | 4388 |
| Fusarium verticillioides | 0 | 1 | 3080 | 735 |
| Gadus morhua | 0 | 1 | 6766 | 5657 |
| Gallus gallus | 9 | 2 | 19010 | 47972 |
| Gallus sonneratii | 0 | 1 | 359 | 73 |
| Gasterosteus aculeatus | 0 | 1 | 5785 | 20618 |
| Gavialis gangeticus | 0 | 1 | 13757 | 10468 |
| Gibberella moniliformis | 0 | 1 | 5154 | 1159 |
| Glossina austeni | 0 | 1 | 4027 | 8905 |
| Glossina brevipalpis | 0 | 1 | 7384 | 7869 |
| Glossina fuscipes | 0 | 1 | 3947 | 8947 |
| Glossina morsitans | 0 | 2 | 4019 | 7598 |
| Glossina pallidipes | 0 | 1 | 3818 | 8292 |
| Glossina palpalis | 0 | 1 | 3849 | 8671 |
| Glycine max | 11 | 4 | 9508 | 66444 |
| Glycyrrhiza uralensis | 0 | 1 | 5522 | 23879 |
| Gorilla gorilla | 0 | 1 | 17661 | 22005 |
| Gossypium | 13 | 1 | 6784 | 29594 |
| Gossypium arboreum | 0 | 2 | 3303 | 22818 |
| Gossypium barbadense | 0 | 1 | 3773 | 70432 |
| Gossypium hirsutum | 0 | 1 | 2537 | 39361 |
| Gossypium raimondii | 0 | 5 | 7663 | 52012 |
| Guillardia theta | 0 | 1 | 3445 | 10018 |
| Haplochromis chilotes | 0 | 1 | 4434 | 874 |
| Haplochromis sp. red tail sheller | 0 | 1 | 4315 | 766 |
| Harpegnathos saltator | 0 | 1 | 4140 | 8095 |
| Helianthus annuus | 7 | 1 | 5992 | 10337 |
| Heliconius melpomene | 0 | 1 | 539 | 327 |
| Helobdella robusta | 0 | 1 | 4093 | 11721 |
| Heterocephalus glaber | 0 | 1 | 6930 | 20695 |
| Hevea brasiliensis | 0 | 1 | 1185 | 853 |
| Homo sapiens | 0 | 1 | 21003 | 19177 |
| Hordeum vulgare | 8 | 4 | 6599 | 46152 |
| Humulus lupulus | 0 | 1 | 603 | 310 |
| Hydra magnipapillata | 0 | 1 | 5600 | 2911 |
| Ictalurus punctatus | 0 | 2 | 8043 | 10392 |
| Ictidomys tridecemlineatus | 0 | 1 | 17430 | 17377 |
| Ipomoea nil | 0 | 1 | 5060 | 4417 |
| Ixodes scapularis | 0 | 2 | 6330 | 11332 |
| Kalanchoe marnieriana | 0 | 1 | 3129 | 27111 |
| Lactuca serriola | 0 | 1 | 5529 | 5411 |
| Larimichthys crocea | 1 | 0 | 2858 | 18124 |
| Latimeria chalumnae | 0 | 1 | 7602 | 16871 |
| Laupala kohalensis | 0 | 1 | 4530 | 745 |
| Leersia perrieri | 0 | 2 | 5573 | 22087 |
| Leishmania | 0 | 1 | 3864 | 1180 |
| Leishmania major | 0 | 1 | 2373 | 782 |
| Lepisosteus oculatus | 0 | 1 | 7748 | 16815 |
| Linepithema humile | 0 | 1 | 213 | 63 |
| Linum usitatissimum | 0 | 1 | 3143 | 22108 |
| Locusta migratoria | 0 | 1 | 4614 | 1058 |
| Lottia gigantean | 0 | 1 | 4541 | 12864 |
| Lotus japonicus | 8 | 2 | 9565 | 30415 |
| Loxodonta africana | 0 | 1 | 17512 | 21946 |
| Lutzomyia longipalpis | 0 | 1 | 3547 | 6461 |
| Macaca fascicularis | 0 | 3 | 11960 | 64817 |
| Macaca mulatta | 0 | 1 | 18367 | 53228 |
| Macaca mulatta lasiota | 0 | 1 | 12007 | 16066 |
| Macropus eugenii | 0 | 1 | 2430 | 563 |
| Magnaporthe grisea | 8 | 1 | 5645 | 16173 |
| Malus x domestica | 7 | 3 | 7579 | 49478 |
| Mammuthus primigenius | 0 | 1 | 186 | 123 |
| Manihot esculenta | 1 | 3 | 25593 | 25593 |
| Marchantia polymorpha | 0 | 1 | 3095 | 7698 |
| Medicago truncatula | 15 | 6 | 42858 | 41110 |
| Meleagris gallopavo | 0 | 1 | 16227 | 14445 |
| Mesembryanthemum crystallinum | 0 | 1 | 4662 | 2987 |
| Microcebus murinus | 0 | 1 | 1498 | 609 |
| Micromonas pusilla CCMP1545 | 0 | 2 | 2774 | 4958 |
| Micromonas sp. RCC299 | 0 | 2 | 2771 | 5067 |
| Mimulus guttatus | 0 | 2 | 6420 | 14933 |
| Monodelphis domestica | 0 | 1 | 17900 | 19462 |
| Morus notabilis | 0 | 1 | 3890 | 14762 |
| Mus musculus | 1 | 0 | 11590 | 35008 |
| Musa acuminata | 0 | 4 | 6214 | 26658 |
| Musca domestica | 0 | 1 | 3763 | 8908 |
| Mustela putorius furo | 0 | 1 | 17478 | 28230 |
| Myotis davidii | 0 | 1 | 5649 | 11129 |
| Myotis lucifugus | 0 | 1 | 17052 | 17868 |
| Nasonia giraulti | 0 | 1 | 2012 | 315 |
| Nasonia vitripennis | 1 | 1 | 2214 | 11088 |
| Nelumbo nucifera | 0 | 1 | 587 | 230 |
| Nelumbo nucifera Gaertn | 0 | 1 | 2182 | 12961 |
| Nematostella vectensis | 0 | 1 | 6624 | 15276 |
| Neospora caninum | 0 | 1 | 2786 | 318 |
| Neurospora crassa | 0 | 1 | 5867 | 6810 |
| Nicotiana benthamiana | 0 | 1 | 1860 | 5668 |
| Nicotiana langsdorffii x Nicotiana sanderae | 0 | 1 | 1231 | 1631 |
| Nicotiana sylvestris | 0 | 1 | 1340 | 1327 |
| Nicotiana tabacum | 8 | 2 | 7024 | 25963 |
| Nomascus leucogenys | 0 | 2 | 14588 | 29938 |
| nopheles funestus | 0 | 1 | 3796 | 7745 |
| Ochotona princeps | 0 | 1 | 943 | 129 |
| Oikopleura dioica | 0 | 1 | 3692 | 14625 |
| Olea europaea | 0 | 1 | 1228 | 4163 |
| Onchocerca volvulus | 0 | 1 | 3268 | 470 |
| Oncorhynchus mykiss | 0 | 2 | 8163 | 33858 |
| Oreochromis niloticus | 0 | 1 | 7926 | 21280 |
| Ornithorhynchus anatinus | 0 | 1 | 17047 | 18570 |
| Oropetium thomaeum | 0 | 1 | 5344 | 16499 |
| Oryctolagus cuniculus | 0 | 1 | 17196 | 18095 |
| Oryza barthii | 0 | 2 | 5558 | 21873 |
| Oryza brachyantha | 0 | 2 | 6831 | 18540 |
| Oryza glaberrima | 0 | 2 | 6598 | 19878 |
| Oryza glumaepatula | 0 | 2 | 5563 | 24041 |
| Oryza longistaminata | 0 | 2 | 5350 | 18496 |
| Oryza meridionalis | 0 | 2 | 5365 | 22166 |
| Oryza nivara | 0 | 2 | 5568 | 24849 |
| Oryza punctata | 0 | 2 | 5642 | 22254 |
| Oryza rufipogon | 0 | 2 | 5556 | 24827 |
| Oryza sativa indica | 7 | 2 | 6985 | 31235 |
| Oryza sativa japonica | 21 | 6 | 7634 | 63740 |
| Oryzias latipes | 0 | 1 | 8317 | 13850 |
| Ostreococcus lucimarinus | 0 | 3 | 6450 | 5870 |
| Ostreococcus tauri | 0 | 1 | 2400 | 3722 |
| Otolemur garnettii | 0 | 1 | 17522 | 17700 |
| Ovis aries | 0 | 2 | 19019 | 45514 |
| Pan paniscus | 0 | 1 | 1537 | 572 |
| Pan troglodytes | 0 | 1 | 8265 | 1331 |
| Panicum hallii | 0 | 1 | 3161 | 15541 |
| Panicum virgatum | 2 | 0 | 2330 | 49111 |
| Pantholops hodgsonii | 0 | 1 | 523 | 43 |
| Papio anubis | 0 | 1 | 17630 | 18496 |
| Parus humilis | 0 | 1 | 7831 | 22037 |
| Pediculus humanus | 0 | 1 | 4566 | 7265 |
| Pelodiscus sinensis | 0 | 1 | 16536 | 17038 |
| Petromyzon marinus | 0 | 1 | 5595 | 8154 |
| Petunia hybrida | 0 | 2 | 4757 | 19974 |
| Phaeodactylum tricornutum | 0 | 1 | 3169 | 5499 |
| Phaseolus coccineus | 0 | 1 | 3993 | 1844 |
| Phaseolus vulgaris | 8 | 1 | 5996 | 15454 |
| Phlebotomus papatasi | 0 | 1 | 3362 | 6935 |
| Phoenix dactylifera | 0 | 1 | 513 | 352 |
| Physcomitrella patens | 0 | 5 | 7280 | 18588 |
| Physcomitrella patens subsp patens | 0 | 1 | 6538 | 9410 |
| Phytophthora infestans | 0 | 1 | 4873 | 4111 |
| Picea abies | 0 | 1 | 869 | 988 |
| Picea asperata | 0 | 1 | 6714 | 16829 |
| Pimephales promelas | 0 | 1 | 8192 | 10387 |
| Pinctada fucata | 0 | 1 | 635 | 195 |
| Pinus taeda | 0 | 1 | 1589 | 2917 |
| Plasmodium berghei | 0 | 1 | 3886 | 944 |
| Plasmodium falciparum | 0 | 1 | 3674 | 605 |
| Plasmodium vivax | 0 | 1 | 3947 | 682 |
| Plasmodium yoelii | 0 | 1 | 4059 | 741 |
| Pleurodeles waltl | 0 | 1 | 577 | 28 |
| Plutella xylostella | 0 | 1 | 884 | 686 |
| Poecilia formosa | 0 | 1 | 7940 | 22681 |
| pogonomyrmex barbatus | 0 | 1 | 108 | 73 |
| Pongo abelii | 0 | 1 | 17862 | 20098 |
| Pongo pygmaeus | 0 | 1 | 2650 | 927 |
| Populus euphratica | 0 | 1 | 694 | 265 |
| Populus trichocarpa | 14 | 4 | 9519 | 45033 |
| Procavia capensis | 0 | 1 | 1100 | 98 |
| Prunus mume | 0 | 1 | 529 | 303 |
| Prunus persica | 1 | 4 | 7645 | 28702 |
| Pseudopodoces humilis | 0 | 1 | 143 | 51 |
| Pteropus alecto | 0 | 1 | 6445 | 13883 |
| Pteropus vampyrus | 0 | 1 | 973 | 58 |
| Pyrus bretschneideri | 0 | 1 | 2623 | 28114 |
| Pyrus communis | 2 | 0 | 6115 | 33283 |
| Python molurus bivittatus | 0 | 1 | 180 | 47 |
| Quercus variabilis | 0 | 1 | 6146 | 9759 |
| Raphanus sativus | 0 | 1 | 5976 | 13330 |
| Rattus norvegicus | 0 | 1 | 6491 | 6471 |
| Rhipicephalus appendiculatus | 0 | 1 | 2727 | 424 |
| Rhodnius prolixus | 0 | 1 | 4233 | 8659 |
| Ricinus communis | 1 | 2 | 7843 | 21223 |
| Saccharomyces cerevisiae | 0 | 2 | 6768 | 7014 |
| Saccharum officinarum | 1 | 1 | 6039 | 25682 |
| Salix purpurea | 1 | 0 | 2402 | 19470 |
| Salmo salar | 0 | 2 | 8377 | 15462 |
| Salvia miltiorrhiza | 0 | 1 | 5436 | 25893 |
| Sarcocystis neurona | 0 | 1 | 2792 | 259 |
| Sarcophilus harrisii | 0 | 1 | 16744 | 17305 |
| Sarcoptes scabiei | 0 | 1 | 3417 | 5709 |
| Schistosoma haematobium | 0 | 1 | 3396 | 6372 |
| Schistosoma japonicum | 0 | 1 | 3300 | 9253 |
| Schistosoma mansoni | 0 | 1 | 5249 | 1473 |
| Schizophyllum commune | 1 | 0 | 3271 | 5682 |
| Schizosaccharomyces pombe | 0 | 1 | 6740 | 5141 |
| Secale cereale | 0 | 1 | 3546 | 1382 |
| Selaginella moellendorffii | 1 | 4 | 5663 | 22640 |
| Sesamum indicum | 0 | 1 | 587 | 225 |
| Setaria italica | 2 | 5 | 7291 | 38038 |
| Setaria viridis | 0 | 1 | 3155 | 15629 |
| Solanum chacoense | 0 | 1 | 1121 | 815 |
| Solanum habrochaites | 0 | 1 | 1517 | 3467 |
| Solanum lycopersicum | 15 | 5 | 8130 | 30533 |
| Solanum melongena | 0 | 2 | 5115 | 7484 |
| Solanum pennellii | 0 | 1 | 1302 | 1362 |
| Solanum tuberosum | 1 | 6 | 7630 | 30215 |
| Solenopsis invicta | 0 | 1 | 3699 | 7167 |
| Sorex araneus | 0 | 1 | 2184 | 416 |
| Sorghum bicolor | 9 | 5 | 8922 | 26245 |
| Sphagnum fallax | 0 | 1 | 3094 | 12681 |
| Spirodela polyrhiza | 0 | 1 | 3067 | 9259 |
| Spisula solidissima | 0 | 1 | 2724 | 697 |
| Stomoxys calcitrans | 0 | 1 | 3781 | 8849 |
| Striga hermonthica | 0 | 1 | 4713 | 4421 |
| Strongylocentrotus purpuratus | 0 | 1 | 6941 | 19769 |
| Sus scrofa | 7 | 2 | 19103 | 50222 |
| Taeniopygia guttata | 0 | 1 | 7084 | 5142 |
| Takifugu rubripes | 0 | 1 | 5562 | 1746 |
| Tarsius syrichta | 0 | 1 | 493 | 95 |
| Tetrahymena thermophila | 0 | 1 | 4084 | 1073 |
| Tetranychus urticae | 0 | 1 | 6186 | 1807 |
| Tetraodon nigroviridis | 0 | 1 | 7845 | 33696 |
| Thalassiosira pseudonana | 0 | 1 | 3191 | 6337 |
| Thellungiella parvula | 0 | 1 | 7676 | 20168 |
| Theobroma cacao | 0 | 5 | 7679 | 27345 |
| Toxoplasma gondii | 0 | 1 | 4980 | 1498 |
| Tribolium castaneum | 0 | 1 | 7151 | 2614 |
| Trichinella spiralis | 0 | 1 | 3618 | 16153 |
| Trichomonas vaginalis | 0 | 1 | 2694 | 449 |
| Trichoplax adhaerens | 0 | 1 | 5928 | 8275 |
| Trifolium pratense | 0 | 1 | 685 | 250 |
| Triphysaria versicolor | 0 | 1 | 4312 | 2435 |
| Triticum aestivum | 10 | 3 | 6717 | 144935 |
| Triticum dicoccoides | 0 | 1 | 385 | 536 |
| Triticum urartu | 1 | 2 | 7069 | 27544 |
| Trypanosoma brucei | 0 | 1 | 1034 | 89 |
| Trypanosoma cruzi | 0 | 1 | 3758 | 597 |
| Tupaia belangeri | 0 | 1 | 1824 | 231 |
| Tupaia belangri chinensis | 0 | 1 | 260 | 36 |
| Tursiops truncatus | 0 | 1 | 4834 | 580 |
| Ursus americanus | 0 | 1 | 3598 | 1168 |
| Utricularia gibba | 0 | 1 | 420 | 120 |
| Vaccinium corymbosum | 0 | 1 | 269 | 18143 |
| Verticillium dahliae | 0 | 1 | 5372 | 6703 |
| Vicugna pacos | 0 | 1 | 1433 | 113 |
| Vigna angularis | 0 | 1 | 2519 | 17249 |
| Vigna radiata | 0 | 1 | 605 | 166 |
| Vigna unguiculata | 0 | 1 | 6095 | 8904 |
| Vitis vinifera | 12 | 5 | 9021 | 46533 |
| Volvox carteri | 0 | 3 | 2869 | 6082 |
| Xenopus laevis | 0 | 1 | 9539 | 20837 |
| Xenopus tropicalis | 0 | 1 | 5964 | 7551 |
| Xiphophorus maculatus | 0 | 1 | 7955 | 15848 |
| Zastera muelleri | 0 | 2 | 2557 | 5373 |
| Zea mays | 13 | 3 | 7498 | 49888 |
| Ziziphus jujuba | 0 | 1 | 432 | 160 |
| Zostera marina | 0 | 1 | 3081 | 10199 |