3	LOC_Os01g72870	BAS1, putative, expressed	gene	BAS1, putative, expressed	chr1	42263977	42267481	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g60460	aminopeptidase, putative, expressed	gene	aminopeptidase, putative, expressed	chr3	34371027	34375231	+	CDS
3	LOC_Os05g06490	RNA polymerase Rpb7, N-terminal domain containing protein, expressed	gene	RNA polymerase Rpb7, N-terminal domain containing protein, expressed	chr5	3342029	3344574	+	CDS,downstream
3	LOC_Os04g51920	protein disulfide isomerase, putative, expressed	gene	protein disulfide isomerase, putative, expressed	chr4	30620539	30623344	-	CDS,downstream
3	LOC_Os06g07550	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr6	3639787	3642652	+	three_prime_UTR,promoter,downstream
3	LOC_Os11g04950	splicing factor, putative, expressed	gene	splicing factor, putative, expressed	chr11	2108008	2114673	-	CDS,downstream
3	LOC_Os11g03710	mitochondrial import inner membrane translocase subunit Tim, putative, expressed	gene	mitochondrial import inner membrane translocase subunit Tim, putative, expressed	chr11	1441725	1443670	-	CDS
3	LOC_Os11g34305	transposon protein, putative, Mutator sub-class	gene	transposon protein, putative, Mutator sub-class	chr11	19631802	19641547	-	CDS
3	LOC_Os01g08850	expressed protein	gene	expressed protein	chr1	4443670	4447386	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g04050	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr3	1851870	1856810	+	CDS,three_prime_UTR
3	LOC_Os01g05800	inner membrane protein, putative, expressed	gene	inner membrane protein, putative, expressed	chr1	2769140	2773609	+	CDS,three_prime_UTR
3	LOC_Os01g51190	expressed protein	gene	expressed protein	chr1	29422376	29427070	+	CDS,three_prime_UTR
3	LOC_Os03g17780	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr3	9892357	9895569	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g47580	ribosomal protein, putative, expressed	gene	ribosomal protein, putative, expressed	chr7	28447564	28450211	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g50470	regulator of chromosome condensation, putative, expressed	gene	regulator of chromosome condensation, putative, expressed	chr1	28977074	28982823	+	CDS,promoter
3	LOC_Os07g08030	ribose-5-phosphate isomerase A, putative, expressed	gene	ribose-5-phosphate isomerase A, putative, expressed	chr7	4067003	4069238	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g10720	AP2-associated protein kinase 1, putative, expressed	gene	AP2-associated protein kinase 1, putative, expressed	chr9	5846603	5850899	-	CDS,three_prime_UTR
3	LOC_Os02g43810	expressed protein	gene	expressed protein	chr2	26436517	26438808	+	CDS,three_prime_UTR
3	LOC_Os08g42850	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	chr8	27088137	27090641	+	three_prime_UTR,CDS,promoter
3	LOC_Os04g46020	GATA zinc finger domain containing protein, expressed	gene	GATA zinc finger domain containing protein, expressed	chr4	27075078	27079429	-	CDS,three_prime_UTR
3	LOC_Os03g27950	Ser/Thr protein phosphatase family protein, putative, expressed	gene	Ser/Thr protein phosphatase family protein, putative, expressed	chr3	16049907	16056972	+	CDS,three_prime_UTR
3	LOC_Os07g10495	expressed protein	gene	expressed protein	chr7	5651016	5652855	+	CDS,promoter
3	LOC_Os01g54550	HSF-type DNA-binding domain containing protein, expressed	gene	HSF-type DNA-binding domain containing protein, expressed	chr1	31369181	31371715	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os09g28570	zinc-binding alcohol dehydrogenase domain-containing protein 2, putative, expressed	gene	zinc-binding alcohol dehydrogenase domain-containing protein 2, putative, expressed	chr9	17376007	17387959	+	three_prime_UTR,CDS
3	LOC_Os10g36270	disease resistance RPP13-like protein 1, putative, expressed	gene	disease resistance RPP13-like protein 1, putative, expressed	chr10	19317580	19325296	+	five_prime_UTR,CDS
3	LOC_Os10g10244	alanyl-tRNA synthetase, putative, expressed	gene	alanyl-tRNA synthetase, putative, expressed	chr10	5648785	5659654	+	CDS
3	LOC_Os03g40260	Regulator of chromosome condensation domain containing protein, expressed	gene	Regulator of chromosome condensation domain containing protein, expressed	chr3	22371413	22378682	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g27890	STE_MEK_ste7_MAP2K.8 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	gene	STE_MEK_ste7_MAP2K.8 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	chr6	15810010	15820886	-	CDS,three_prime_UTR
3	LOC_Os10g03930	OsFBX355 - F-box domain containing protein, expressed	gene	OsFBX355 - F-box domain containing protein, expressed	chr10	1784055	1787056	-	three_prime_UTR,promoter
3	LOC_Os04g11890	OsFBX121 - F-box domain containing protein, expressed	gene	OsFBX121 - F-box domain containing protein, expressed	chr4	6515976	6517713	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g25110	expressed protein	gene	expressed protein	chr3	14335810	14340397	+	CDS,three_prime_UTR
3	LOC_Os03g61820	FEN1B - Putative flap endonuclease protein, expressed	gene	FEN1B - Putative flap endonuclease protein, expressed	chr3	35039479	35045016	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g35850	cytochrome b5-like Heme/Steroid binding domain containing protein, expressed	gene	cytochrome b5-like Heme/Steroid binding domain containing protein, expressed	chr10	19094878	19097365	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g48964	WD-40 repeat family protein, putative, expressed	gene	WD-40 repeat family protein, putative, expressed	chr2	29928500	29935779	-	CDS
3	LOC_Os05g20914	expressed protein	gene	expressed protein	chr5	12293850	12298462	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os11g32410	expressed protein	gene	expressed protein	chr11	18667773	18671138	-	CDS,three_prime_UTR
3	LOC_Os10g17630	B3 DNA binding domain containing protein, expressed	gene	B3 DNA binding domain containing protein, expressed	chr10	8836962	8839267	+	CDS,downstream
3	LOC_Os02g02540	glutamate receptor, putative, expressed	gene	glutamate receptor, putative, expressed	chr2	918797	923970	+	CDS,three_prime_UTR
3	LOC_Os10g29495	speckle-type POZ protein, putative, expressed	gene	speckle-type POZ protein, putative, expressed	chr10	15253231	15259968	+	CDS
3	LOC_Os03g10540	OsFBX78 - F-box domain containing protein, expressed	gene	OsFBX78 - F-box domain containing protein, expressed	chr3	5371966	5378447	+	CDS,five_prime_UTR
3	LOC_Os06g02370	expressed protein	gene	expressed protein	chr6	795311	799813	-	CDS,three_prime_UTR
3	LOC_Os09g15980	expressed protein	gene	expressed protein	chr9	9767934	9774758	+	CDS
3	LOC_Os04g32600	expressed protein	gene	expressed protein	chr4	19455325	19457893	+	three_prime_UTR
3	LOC_Os03g60810	lectin-like receptor kinase, putative, expressed	gene	lectin-like receptor kinase, putative, expressed	chr3	34537707	34540980	-	three_prime_UTR,promoter
3	LOC_Os02g32030	elongation factor, putative, expressed	gene	elongation factor, putative, expressed	chr2	18911065	18916199	+	CDS
3	LOC_Os12g02589	hydrolase, alpha/beta fold family protein, putative, expressed	gene	hydrolase, alpha/beta fold family protein, putative, expressed	chr12	890782	897452	+	CDS
3	LOC_Os01g03520	ubiquitin conjugating enzyme protein, putative, expressed	gene	ubiquitin conjugating enzyme protein, putative, expressed	chr1	1420693	1427049	+	CDS,three_prime_UTR
3	LOC_Os08g13420	S-domain receptor-like protein kinase, putative	gene	S-domain receptor-like protein kinase, putative	chr8	7981563	7984542	+	CDS
3	LOC_Os10g25674	mps one binder kinase activator-like 1A, putative, expressed	gene	mps one binder kinase activator-like 1A, putative, expressed	chr10	13218381	13220996	-	CDS
3	LOC_Os07g41660	expressed protein	gene	expressed protein	chr7	24964971	24967305	-	three_prime_UTR,promoter
3	LOC_Os06g49185	conserved hypothetical protein	gene	conserved hypothetical protein	chr6	29801053	29802834	-	CDS,downstream
3	LOC_Os01g22550	galactosyltransferase family protein, putative, expressed	gene	galactosyltransferase family protein, putative, expressed	chr1	12666317	12671731	-	CDS
3	LOC_Os10g32500	expressed protein	gene	expressed protein	chr10	16947694	16950246	+	CDS,three_prime_UTR
3	LOC_Os08g09840	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr8	5682942	5685808	-	CDS
3	LOC_Os12g03190	bifunctional aspartokinase/homoserine dehydrogenase, putative, expressed	gene	bifunctional aspartokinase/homoserine dehydrogenase, putative, expressed	chr12	1215707	1219583	-	CDS,three_prime_UTR,downstream
3	LOC_Os06g42850	extracellular ligand-gated ion channel, putative, expressed	gene	extracellular ligand-gated ion channel, putative, expressed	chr6	25746066	25748947	-	CDS
3	LOC_Os06g45000	ubiquitin-conjugating enzyme, putative, expressed	gene	ubiquitin-conjugating enzyme, putative, expressed	chr6	27218531	27222175	+	three_prime_UTR,downstream
3	LOC_Os07g26940	ORM1, putative, expressed	gene	ORM1, putative, expressed	chr7	15601027	15603594	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g01500	IQ calmodulin-binding motif family protein, putative, expressed	gene	IQ calmodulin-binding motif family protein, putative, expressed	chr6	304994	307754	-	three_prime_UTR
3	LOC_Os06g21330	ABB1 - Ankyrin repeat region with 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains, expressed	gene	ABB1 - Ankyrin repeat region with 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains, expressed	chr6	12317392	12321833	+	three_prime_UTR,downstream
3	LOC_Os03g20310	transcription factor HBP-1b, putative, expressed	gene	transcription factor HBP-1b, putative, expressed	chr3	11474616	11479984	-	CDS,three_prime_UTR
3	LOC_Os07g45000	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr7	26843727	26849336	+	CDS,three_prime_UTR
3	LOC_Os09g10940	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr9	6020898	6024706	+	CDS,three_prime_UTR,promoter
3	LOC_Os07g47820	acyl-CoA dehydrogenase family member 10, putative, expressed	gene	acyl-CoA dehydrogenase family member 10, putative, expressed	chr7	28551630	28559013	+	CDS,three_prime_UTR
3	LOC_Os03g54220	expressed protein	gene	expressed protein	chr3	31075523	31080125	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os01g48446	no apical meristem protein, putative, expressed	gene	no apical meristem protein, putative, expressed	chr1	27779904	27781222	-	three_prime_UTR,promoter
3	LOC_Os06g16260	OsSigP5 - Putative Type I Signal Peptidase homologue; employs a putative Ser/His catalytic dyad, expressed	gene	OsSigP5 - Putative Type I Signal Peptidase homologue; employs a putative Ser/His catalytic dyad, expressed	chr6	9255959	9261252	-	CDS,three_prime_UTR
3	LOC_Os07g45195	expressed protein	gene	expressed protein	chr7	26977363	26982868	-	CDS,three_prime_UTR
3	LOC_Os11g03630	hypothetical protein	gene	hypothetical protein	chr11	1407946	1409169	+	CDS,promoter,downstream
3	LOC_Os09g38784	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr9	22283963	22286047	-	CDS,promoter,downstream
3	LOC_Os01g61690	OsSCP5 - Putative Serine Carboxypeptidase homologue, expressed	gene	OsSCP5 - Putative Serine Carboxypeptidase homologue, expressed	chr1	35687013	35690643	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g26730	chaperonin, putative, expressed	gene	chaperonin, putative, expressed	chr9	16235437	16239792	-	CDS,three_prime_UTR
3	LOC_Os01g69920	histidine kinase, putative, expressed	gene	histidine kinase, putative, expressed	chr1	40402672	40408572	-	three_prime_UTR,promoter
3	LOC_Os12g01540	conserved hypothetical protein	gene	conserved hypothetical protein	chr12	323731	327238	+	CDS,downstream
3	LOC_Os12g39070	TATA-binding protein, putative, expressed	gene	TATA-binding protein, putative, expressed	chr12	23997666	24002140	+	CDS,three_prime_UTR
3	LOC_Os01g73890	transcription initiation factor IIA gamma chain, putative, expressed	gene	transcription initiation factor IIA gamma chain, putative, expressed	chr1	42817987	42820083	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g36540	magnesium-chelatase subunit chlI, chloroplast precursor, putative, expressed	gene	magnesium-chelatase subunit chlI, chloroplast precursor, putative, expressed	chr3	20246185	20248657	-	three_prime_UTR,promoter
3	LOC_Os03g61330	fumarylacetoacetase, putative, expressed	gene	fumarylacetoacetase, putative, expressed	chr3	34809995	34813241	-	CDS,three_prime_UTR,downstream
3	LOC_Os09g20880	serine/threonine-protein kinase, putative, expressed	gene	serine/threonine-protein kinase, putative, expressed	chr9	12564501	12568201	-	CDS
3	LOC_Os06g43760	tRNA synthetase class I, putative, expressed	gene	tRNA synthetase class I, putative, expressed	chr6	26331890	26344253	+	CDS,three_prime_UTR
3	LOC_Os03g08740	expressed protein	gene	expressed protein	chr3	4512400	4517537	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g13120	histidine triad family protein, putative, expressed	gene	histidine triad family protein, putative, expressed	chr12	7290814	7298557	+	CDS,three_prime_UTR
3	LOC_Os02g08364	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr2	4449774	4454805	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g49520	armadillo/beta-catenin repeat family protein, putative, expressed	gene	armadillo/beta-catenin repeat family protein, putative, expressed	chr2	30260841	30266044	+	five_prime_UTR,CDS,downstream
3	LOC_Os01g15640	no apical meristem protein, putative, expressed	gene	no apical meristem protein, putative, expressed	chr1	8791646	8796363	-	CDS,promoter
3	LOC_Os12g31380	initiation factor 2 subunit family domain containing protein, expressed	gene	initiation factor 2 subunit family domain containing protein, expressed	chr12	18850834	18853849	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g13000	GTP-binding protein, putative, expressed	gene	GTP-binding protein, putative, expressed	chr3	7021842	7025173	+	CDS,three_prime_UTR
3	LOC_Os04g01310	serine/threonine-protein kinase receptor precursor, putative, expressed	gene	serine/threonine-protein kinase receptor precursor, putative, expressed	chr4	239548	242305	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g56130	CSLC1 - cellulose synthase-like family C, expressed	gene	CSLC1 - cellulose synthase-like family C, expressed	chr1	32317569	32321629	-	CDS
3	LOC_Os02g32530	SAM domain family protein, expressed	gene	SAM domain family protein, expressed	chr2	19251050	19255479	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g60939	dolichyl-phosphate beta-glycosyltransferase, putative, expressed	gene	dolichyl-phosphate beta-glycosyltransferase, putative, expressed	chr3	34623615	34626230	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g03980	expressed protein	gene	expressed protein	chr6	1612665	1619184	-	three_prime_UTR
3	LOC_Os05g45490	hydrolase, acting on carbon-nitrogen, putative, expressed	gene	hydrolase, acting on carbon-nitrogen, putative, expressed	chr5	26317180	26321733	+	CDS,three_prime_UTR
3	LOC_Os08g42910	peptidase, M24 family protein, putative, expressed	gene	peptidase, M24 family protein, putative, expressed	chr8	27120925	27124824	-	CDS,promoter,downstream
3	LOC_Os07g09320	FHA domain containing protein, putative, expressed	gene	FHA domain containing protein, putative, expressed	chr7	4881818	4889137	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g36150	Yip1 domain containing protein, expressed	gene	Yip1 domain containing protein, expressed	chr5	21365093	21369035	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g15220	bromodomain containing protein, expressed	gene	bromodomain containing protein, expressed	chr2	8490391	8498389	+	three_prime_UTR
3	LOC_Os09g07800	expressed protein	gene	expressed protein	chr9	3948844	3952272	+	CDS
3	LOC_Os04g28460	phospholipid-transporting ATPase 2, putative, expressed	gene	phospholipid-transporting ATPase 2, putative, expressed	chr4	16671326	16684592	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g39960	lycopene epsilon cyclase, chloroplast precursor, putative, expressed	gene	lycopene epsilon cyclase, chloroplast precursor, putative, expressed	chr1	22533954	22537698	+	CDS
3	LOC_Os01g74530	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr1	43162419	43165943	-	CDS,three_prime_UTR
3	LOC_Os06g06880	Ser/Thr protein phosphatase family protein, putative, expressed	gene	Ser/Thr protein phosphatase family protein, putative, expressed	chr6	3262800	3266309	-	CDS,three_prime_UTR
3	LOC_Os03g58590	expressed protein	gene	expressed protein	chr3	33356856	33363499	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g47900	SET domain protein SDG117, putative, expressed	gene	SET domain protein SDG117, putative, expressed	chr2	29297002	29301346	+	CDS,three_prime_UTR
3	LOC_Os11g04670	2-isopropylmalate synthase B, putative, expressed	gene	2-isopropylmalate synthase B, putative, expressed	chr11	1985059	1990945	+	CDS
3	LOC_Os04g57739	expressed protein	gene	expressed protein	chr4	34208038	34211467	+	three_prime_UTR
3	LOC_Os08g07830	DUF292 domain containing protein, expressed	gene	DUF292 domain containing protein, expressed	chr8	4384771	4388034	-	CDS,three_prime_UTR,downstream
3	LOC_Os02g44610	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr2	27023315	27029874	+	CDS,promoter
3	LOC_Os05g32170	TKL_IRAK_CR4L.5 - The CR4L subfamily has homology with Crinkly4, expressed	gene	TKL_IRAK_CR4L.5 - The CR4L subfamily has homology with Crinkly4, expressed	chr5	18694802	18697754	+	three_prime_UTR
3	LOC_Os05g46430	60S ribosomal protein L28-1, putative, expressed	gene	60S ribosomal protein L28-1, putative, expressed	chr5	26839340	26842368	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g14910	expressed protein	gene	expressed protein	chr3	8129130	8130444	+	three_prime_UTR
3	LOC_Os02g39570	ACT domain containing protein, expressed	gene	ACT domain containing protein, expressed	chr2	23879738	23884873	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g18830	survival motor neuron containing protein, expressed	gene	survival motor neuron containing protein, expressed	chr11	10686485	10692910	+	CDS,three_prime_UTR
3	LOC_Os12g42210	OsDegp15 - Putative Deg protease homologue, expressed	gene	OsDegp15 - Putative Deg protease homologue, expressed	chr12	26146553	26151383	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g02400	RNA-binding region RNP-1, putative, expressed	gene	RNA-binding region RNP-1, putative, expressed	chr9	992245	994642	-	three_prime_UTR
3	LOC_Os05g37130	glycosyl hydrolases family 17, putative, expressed	gene	glycosyl hydrolases family 17, putative, expressed	chr5	21636748	21641007	-	three_prime_UTR,downstream
3	LOC_Os07g32480	mitotic checkpoint serine/threonine-protein kinase BUB1, putative, expressed	gene	mitotic checkpoint serine/threonine-protein kinase BUB1, putative, expressed	chr7	19327733	19330915	+	CDS
3	LOC_Os12g12370	outer envelope protein, putative, expressed	gene	outer envelope protein, putative, expressed	chr12	6810108	6813884	+	CDS,downstream
3	LOC_Os02g41550	FAD binding domain of DNA photolyase domain containing protein, expressed	gene	FAD binding domain of DNA photolyase domain containing protein, expressed	chr2	24909993	24916230	+	CDS,three_prime_UTR
3	LOC_Os09g32760	acyl-ACP thioesterase, putative, expressed	gene	acyl-ACP thioesterase, putative, expressed	chr9	19541336	19545176	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g12250	ribosomal protein L24, putative, expressed	gene	ribosomal protein L24, putative, expressed	chr7	6863684	6865881	+	CDS
3	LOC_Os01g67126	ribosomal L18p/L5e family protein, putative, expressed	gene	ribosomal L18p/L5e family protein, putative, expressed	chr1	38967335	38969785	+	CDS,downstream
3	LOC_Os12g05600	hydrolase, alpha/beta fold family protein, putative, expressed	gene	hydrolase, alpha/beta fold family protein, putative, expressed	chr12	2570625	2572917	+	CDS,three_prime_UTR
3	LOC_Os03g19310	glycosyltransferase, putative, expressed	gene	glycosyltransferase, putative, expressed	chr3	10852729	10854460	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g07566	LRR19, putative	gene	LRR19, putative	chr10	4098720	4101485	-	CDS,promoter
3	LOC_Os06g48330	ATEXO70G1, putative, expressed	gene	ATEXO70G1, putative, expressed	chr6	29230006	29232946	+	three_prime_UTR,downstream
3	LOC_Os10g32520	expressed protein	gene	expressed protein	chr10	16956904	16963928	-	three_prime_UTR,promoter
3	LOC_Os06g51460	white-brown complex homolog protein, putative, expressed	gene	white-brown complex homolog protein, putative, expressed	chr6	31168639	31173869	-	CDS
3	LOC_Os02g18150	expressed protein	gene	expressed protein	chr2	10540275	10543153	-	three_prime_UTR,promoter
3	LOC_Os02g55000	zinc finger CCCH-type with G patch domain-containing protein, putative, expressed	gene	zinc finger CCCH-type with G patch domain-containing protein, putative, expressed	chr2	33688851	33692709	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g39910	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr9	22882557	22887111	-	CDS
3	LOC_Os01g43060	expressed protein	gene	expressed protein	chr1	24567957	24570491	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g38940	integral membrane protein, putative, expressed	gene	integral membrane protein, putative, expressed	chr4	22949110	22952145	-	three_prime_UTR,promoter
3	LOC_Os07g04910	reticulon domain containing protein, putative, expressed	gene	reticulon domain containing protein, putative, expressed	chr7	2169639	2171893	+	three_prime_UTR
3	LOC_Os01g74010	cyclase/dehydrase family protein, expressed	gene	cyclase/dehydrase family protein, expressed	chr1	42869480	42871642	-	three_prime_UTR
3	LOC_Os02g55970	ANTH, putative, expressed	gene	ANTH, putative, expressed	chr2	34248773	34255405	+	CDS
3	LOC_Os07g05570	ERD4 protein, putative, expressed	gene	ERD4 protein, putative, expressed	chr7	2600188	2605226	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g40550	kinase, pfkB family, putative, expressed	gene	kinase, pfkB family, putative, expressed	chr3	22546002	22550535	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g22380	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr3	12813298	12818086	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g15830	peroxidase precursor, putative, expressed	gene	peroxidase precursor, putative, expressed	chr1	8916547	8918971	+	three_prime_UTR,downstream
3	LOC_Os01g24950	exocyst complex component 6, putative, expressed	gene	exocyst complex component 6, putative, expressed	chr1	14058546	14063879	+	three_prime_UTR
3	LOC_Os03g50860	histidine kinase, putative, expressed	gene	histidine kinase, putative, expressed	chr3	29045370	29051618	+	CDS,three_prime_UTR
3	LOC_Os07g13460	expressed protein	gene	expressed protein	chr7	7716786	7722664	+	CDS,promoter
3	LOC_Os03g07820	exostosin family protein, putative, expressed	gene	exostosin family protein, putative, expressed	chr3	3977664	3982545	+	CDS,three_prime_UTR,promoter
3	LOC_Os02g34530	OsPDIL5-3  protein disulfide isomerase PDIL5-3, expressed	gene	OsPDIL5-3  protein disulfide isomerase PDIL5-3, expressed	chr2	20694520	20696830	+	CDS,downstream
3	LOC_Os01g12374	hypothetical protein	gene	hypothetical protein	chr1	6757675	6759456	-	CDS,downstream
3	LOC_Os04g30880	TBC domain containing protein, expressed	gene	TBC domain containing protein, expressed	chr4	18280789	18284715	+	CDS,downstream
3	LOC_Os05g03100	HECT-domain domain containing protein, expressed	gene	HECT-domain domain containing protein, expressed	chr5	1223947	1230041	+	CDS
3	LOC_Os06g38950	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr6	23104228	23112101	-	CDS
3	LOC_Os05g23320	expressed protein	gene	expressed protein	chr5	13251144	13255372	+	CDS
3	LOC_Os03g52130	expressed protein	gene	expressed protein	chr3	29924394	29925737	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g14990	chorismate synthase 2, chloroplast precursor, putative, expressed	gene	chorismate synthase 2, chloroplast precursor, putative, expressed	chr3	8176687	8180681	-	CDS,downstream
3	LOC_Os06g28820	cycloartenol synthase, putative	gene	cycloartenol synthase, putative	chr6	16399701	16431412	-	five_prime_UTR,CDS
3	LOC_Os01g59150	tubulin/FtsZ domain containing protein, putative, expressed	gene	tubulin/FtsZ domain containing protein, putative, expressed	chr1	34166889	34170766	+	CDS
3	LOC_Os04g40950	glyceraldehyde-3-phosphate dehydrogenase, putative, expressed	gene	glyceraldehyde-3-phosphate dehydrogenase, putative, expressed	chr4	24120310	24124030	+	CDS,three_prime_UTR
3	LOC_Os04g42270	60S ribosomal protein L23A, putative, expressed	gene	60S ribosomal protein L23A, putative, expressed	chr4	24822669	24824888	-	CDS,three_prime_UTR
3	LOC_Os01g37480	expressed protein	gene	expressed protein	chr1	20941073	20944713	-	CDS,three_prime_UTR
3	LOC_Os03g62400	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr3	35338039	35341896	-	CDS,promoter
3	LOC_Os07g15670	peroxiredoxin, putative, expressed	gene	peroxiredoxin, putative, expressed	chr7	9098103	9101930	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g08000	expressed protein	gene	expressed protein	chr3	4088999	4093130	+	CDS,three_prime_UTR
3	LOC_Os11g06780	serine/threonine-protein kinase BRI1-like 1 precursor, putative, expressed	gene	serine/threonine-protein kinase BRI1-like 1 precursor, putative, expressed	chr11	3309986	3312195	+	CDS
3	LOC_Os10g04180	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr10	1948274	1955911	-	CDS
3	LOC_Os05g32530	mannosylglycoprotein endo-beta-mannosidase, putative, expressed	gene	mannosylglycoprotein endo-beta-mannosidase, putative, expressed	chr5	18948361	18957255	+	CDS
3	LOC_Os01g01380	expressed protein	gene	expressed protein	chr1	190036	195287	+	CDS,three_prime_UTR
3	LOC_Os06g17285	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr6	10008623	10012502	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g21990	expressed protein	gene	expressed protein	chr11	12169530	12177172	-	CDS
3	LOC_Os09g09360	esterase/lipase/thioesterase, putative, expressed	gene	esterase/lipase/thioesterase, putative, expressed	chr9	5005931	5019013	+	CDS,three_prime_UTR
3	LOC_Os03g14590	calcium-binding EF hand family protein, putative, expressed	gene	calcium-binding EF hand family protein, putative, expressed	chr3	7913435	7917193	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g49470	protein kinase APK1B, chloroplast precursor, putative, expressed	gene	protein kinase APK1B, chloroplast precursor, putative, expressed	chr7	29629568	29632475	+	three_prime_UTR,downstream
3	LOC_Os10g25220	SAP domain containing protein, expressed	gene	SAP domain containing protein, expressed	chr10	12947320	12952018	-	CDS
3	LOC_Os01g70190	exostosin family domain containing protein, expressed	gene	exostosin family domain containing protein, expressed	chr1	40624968	40628463	-	CDS,three_prime_UTR
3	LOC_Os02g34950	ATP binding protein, putative, expressed	gene	ATP binding protein, putative, expressed	chr2	20957070	20960818	-	CDS,three_prime_UTR,downstream
3	LOC_Os09g37700	proteophosphoglycan ppg4, putative, expressed	gene	proteophosphoglycan ppg4, putative, expressed	chr9	21727320	21730623	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g52100	peptidase, M24 family protein, putative, expressed	gene	peptidase, M24 family protein, putative, expressed	chr4	30759998	30763571	-	CDS
3	LOC_Os11g01140	AGC_PVPK_like_kin82y.18 - ACG kinases include homologs to PKA, PKG and PKC, expressed	gene	AGC_PVPK_like_kin82y.18 - ACG kinases include homologs to PKA, PKG and PKC, expressed	chr11	78187	93113	+	CDS
3	LOC_Os05g12490	transporter-related, putative, expressed	gene	transporter-related, putative, expressed	chr5	7171120	7176514	-	CDS
3	LOC_Os03g12090	expressed protein	gene	expressed protein	chr3	6341315	6350911	+	CDS,downstream
3	LOC_Os10g08840	hydrolase, alpha/beta fold family domain containing protein, expressed	gene	hydrolase, alpha/beta fold family domain containing protein, expressed	chr10	4799780	4805259	+	CDS,three_prime_UTR
3	LOC_Os09g37570	OsFBX340 - F-box domain containing protein, expressed	gene	OsFBX340 - F-box domain containing protein, expressed	chr9	21652567	21654852	+	CDS,three_prime_UTR
3	LOC_Os03g45720	glyoxalase family protein, putative, expressed	gene	glyoxalase family protein, putative, expressed	chr3	25799632	25802518	-	CDS,three_prime_UTR,downstream
3	LOC_Os11g29410	hypothetical protein	gene	hypothetical protein	chr11	16608633	16612943	-	CDS,promoter
3	LOC_Os06g47570	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr6	28800753	28803728	+	CDS,downstream
3	LOC_Os07g39510	yippee zinc-binding protein, putative, expressed	gene	yippee zinc-binding protein, putative, expressed	chr7	23672064	23675419	+	CDS,three_prime_UTR
3	LOC_Os04g52614	SHR5-receptor-like kinase, putative, expressed	gene	SHR5-receptor-like kinase, putative, expressed	chr4	31114588	31122620	-	CDS
3	LOC_Os02g42406	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr2	25505004	25507718	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g54119	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr1	31119662	31131687	-	CDS
3	LOC_Os04g38700	molybdopterin biosynthesis protein CNX3, putative, expressed	gene	molybdopterin biosynthesis protein CNX3, putative, expressed	chr4	22798633	22804092	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g16180	MT-A70 domain containing protein, expressed	gene	MT-A70 domain containing protein, expressed	chr1	9158606	9164693	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g34310	centromere/kinetochore protein zw10, putative, expressed	gene	centromere/kinetochore protein zw10, putative, expressed	chr11	19643467	19647318	-	five_prime_UTR,CDS
3	LOC_Os05g43540	transmembrane protein 56, putative, expressed	gene	transmembrane protein 56, putative, expressed	chr5	25250161	25253735	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g18480	lipase class 3 family protein, putative, expressed	gene	lipase class 3 family protein, putative, expressed	chr2	10758887	10762541	+	CDS,three_prime_UTR
3	LOC_Os06g30894	expressed protein	gene	expressed protein	chr6	17937102	17946214	-	CDS,three_prime_UTR
3	LOC_Os10g02630	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr10	1006562	1011920	-	CDS,three_prime_UTR,downstream
3	LOC_Os06g23534	unknown	gene	unknown	chr6	13726479	13728751	-	five_prime_UTR,CDS
3	LOC_Os01g32890	hypothetical protein	gene	hypothetical protein	chr1	18061400	18062929	-	CDS,promoter
3	LOC_Os07g22720	2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed	gene	2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed	chr7	12810619	12818411	-	CDS,three_prime_UTR
3	LOC_Os06g12600	kinase, pfkB family, putative, expressed	gene	kinase, pfkB family, putative, expressed	chr6	6841812	6847565	+	CDS
3	LOC_Os01g05840	oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed	gene	oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed	chr1	2799436	2802742	+	CDS
3	LOC_Os05g05600	ATA15 protein, putative, expressed	gene	ATA15 protein, putative, expressed	chr5	2786026	2791975	+	CDS,three_prime_UTR
3	LOC_Os07g22350	glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed	gene	glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed	chr7	12543217	12549067	-	CDS
3	LOC_Os05g01460	STIP1 homology and U box-containing protein 1, putative, expressed	gene	STIP1 homology and U box-containing protein 1, putative, expressed	chr5	263725	266445	-	three_prime_UTR,CDS,downstream
3	LOC_Os12g17320	polyprenyl synthetase, putative, expressed	gene	polyprenyl synthetase, putative, expressed	chr12	9912702	9920070	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g35330	TKL_IRAK_DUF26-lc.13 - DUF26 kinases have homology to DUF26 containing loci, expressed	gene	TKL_IRAK_DUF26-lc.13 - DUF26 kinases have homology to DUF26 containing loci, expressed	chr7	21139948	21143316	+	CDS
3	LOC_Os01g06280	TKL_IRAK_CrRLK1L-1.4 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed	gene	TKL_IRAK_CrRLK1L-1.4 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed	chr1	2981483	2985968	+	three_prime_UTR,downstream
3	LOC_Os06g03580	zinc RING finger protein, putative, expressed	gene	zinc RING finger protein, putative, expressed	chr6	1382619	1385323	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g68230	expressed protein	gene	expressed protein	chr1	39653591	39656943	-	three_prime_UTR,downstream
3	LOC_Os01g37820	oxidoreductase/ transition metal ion binding protein, putative, expressed	gene	oxidoreductase/ transition metal ion binding protein, putative, expressed	chr1	21150445	21154594	-	CDS,three_prime_UTR
3	LOC_Os02g10050	expressed protein	gene	expressed protein	chr2	5228731	5231338	+	CDS,downstream
3	LOC_Os08g09100	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr8	5267013	5272174	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g23700	transposon protein, putative, Mutator sub-class, expressed	gene	transposon protein, putative, Mutator sub-class, expressed	chr8	14328294	14335694	+	three_prime_UTR
3	LOC_Os04g35080	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr4	21151100	21155010	+	CDS,three_prime_UTR
3	LOC_Os02g01010	OsPDIL1-4  protein disulfide isomerase PDIL1-4, expressed	gene	OsPDIL1-4  protein disulfide isomerase PDIL1-4, expressed	chr2	3514	8377	-	CDS,downstream
3	LOC_Os03g09930	sulfate transporter, putative, expressed	gene	sulfate transporter, putative, expressed	chr3	4945325	4952952	-	CDS,three_prime_UTR,downstream
3	LOC_Os06g45090	expressed protein	gene	expressed protein	chr6	27270969	27274231	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g45875	expressed protein	gene	expressed protein	chr5	26517505	26520158	+	CDS,promoter,downstream
3	LOC_Os04g32680	POEI20 - Pollen Ole e I allergen and extensin family protein precursor, expressed	gene	POEI20 - Pollen Ole e I allergen and extensin family protein precursor, expressed	chr4	19521444	19522713	-	five_prime_UTR,CDS,downstream
3	LOC_Os03g22890	GTPase of unknown function domain containing protein, putative, expressed	gene	GTPase of unknown function domain containing protein, putative, expressed	chr3	13226004	13230819	+	CDS,three_prime_UTR
3	LOC_Os05g05140	expressed protein	gene	expressed protein	chr5	2499837	2503364	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g12120	no apical meristem protein, putative, expressed	gene	no apical meristem protein, putative, expressed	chr3	6357095	6364595	-	CDS,three_prime_UTR
3	LOC_Os04g35140	OsSub41 - Putative Subtilisin homologue, expressed	gene	OsSub41 - Putative Subtilisin homologue, expressed	chr4	21186917	21190162	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g50850	ZOS3-17 - C2H2 zinc finger protein, expressed	gene	ZOS3-17 - C2H2 zinc finger protein, expressed	chr3	29032346	29038648	-	CDS,three_prime_UTR
3	LOC_Os07g04200	bacterial transferase hexapeptide domain containing protein, expressed	gene	bacterial transferase hexapeptide domain containing protein, expressed	chr7	1831932	1834740	-	CDS,three_prime_UTR
3	LOC_Os02g39600	outer envelope protein, putative, expressed	gene	outer envelope protein, putative, expressed	chr2	23888790	23892961	-	CDS,promoter
3	LOC_Os05g35440	serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed	gene	serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed	chr5	20987225	20992143	-	CDS,three_prime_UTR
3	LOC_Os03g47770	ubiquitin-conjugating enzyme E2 W, putative, expressed	gene	ubiquitin-conjugating enzyme E2 W, putative, expressed	chr3	27104494	27109585	-	CDS,promoter
3	LOC_Os07g44650	LYR motif containing protein, putative, expressed	gene	LYR motif containing protein, putative, expressed	chr7	26636516	26638955	+	CDS,three_prime_UTR,promoter
3	LOC_Os12g26044	expressed protein	gene	expressed protein	chr12	15124868	15127244	-	CDS,three_prime_UTR
3	LOC_Os01g27020	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr1	15058396	15066528	+	CDS,three_prime_UTR
3	LOC_Os08g34160	CAF1 family ribonuclease containing protein, putative, expressed	gene	CAF1 family ribonuclease containing protein, putative, expressed	chr8	21408439	21413437	+	CDS,downstream
3	LOC_Os12g35580	riboflavin synthase alpha chain, putative, expressed	gene	riboflavin synthase alpha chain, putative, expressed	chr12	21603682	21605812	+	three_prime_UTR,CDS
3	LOC_Os06g47520	expressed protein	gene	expressed protein	chr6	28767496	28770069	+	three_prime_UTR,downstream
3	LOC_Os04g32270	membrane-anchored ubiquitin-fold protein, putative, expressed	gene	membrane-anchored ubiquitin-fold protein, putative, expressed	chr4	19162548	19166646	-	CDS,three_prime_UTR
3	LOC_Os03g30550	RNA-binding protein-like, putative, expressed	gene	RNA-binding protein-like, putative, expressed	chr3	17433169	17437732	+	CDS
3	LOC_Os12g39370	expressed protein	gene	expressed protein	chr12	24181873	24184329	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g51000	expressed protein	gene	expressed protein	chr5	29208593	29212153	-	CDS,three_prime_UTR
3	LOC_Os11g09310	zinc finger CCHC domain-containing protein 10, putative, expressed	gene	zinc finger CCHC domain-containing protein 10, putative, expressed	chr11	4986799	4988739	-	CDS,three_prime_UTR,downstream
3	LOC_Os07g41120	RNA recognition motif containing protein, putative	gene	RNA recognition motif containing protein, putative	chr7	24609207	24612695	-	CDS
3	LOC_Os03g39860	acyl carrier protein, putative, expressed	gene	acyl carrier protein, putative, expressed	chr3	22163108	22168426	-	CDS
3	LOC_Os01g73080	expressed protein	gene	expressed protein	chr1	42392358	42400171	-	three_prime_UTR,promoter
3	LOC_Os11g01740	serine/threonine-protein kinase, putative, expressed	gene	serine/threonine-protein kinase, putative, expressed	chr11	396421	400949	-	CDS
3	LOC_Os04g58600	L-asparaginase precursor protein, putative, expressed	gene	L-asparaginase precursor protein, putative, expressed	chr4	34654387	34658228	+	CDS,three_prime_UTR
3	LOC_Os11g06910	myosin heavy chain-related, putative, expressed	gene	myosin heavy chain-related, putative, expressed	chr11	3385189	3391832	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g29854	RGH1A, putative, expressed	gene	RGH1A, putative, expressed	chr8	18343152	18356324	+	CDS
3	LOC_Os08g08586	expressed protein	gene	expressed protein	chr8	4965415	4968134	-	three_prime_UTR
3	LOC_Os03g28420	3-oxoacyl-synthase, putative, expressed	gene	3-oxoacyl-synthase, putative, expressed	chr3	16370177	16377122	+	CDS
3	LOC_Os03g56234	myb/SANT domain protein, putative, expressed	gene	myb/SANT domain protein, putative, expressed	chr3	32027542	32033811	-	CDS,downstream
3	LOC_Os04g51100	COBW domain containing protein, putative, expressed	gene	COBW domain containing protein, putative, expressed	chr4	30079079	30082269	+	CDS,three_prime_UTR
3	LOC_Os03g32040	phenazine biosynthesis protein, putative, expressed	gene	phenazine biosynthesis protein, putative, expressed	chr3	18319330	18321537	+	CDS,downstream
3	LOC_Os01g09510	60S acidic ribosomal protein, putative, expressed	gene	60S acidic ribosomal protein, putative, expressed	chr1	4851430	4853566	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g63150	retrotransposon protein, putative, Ty3-gypsy subclass, expressed	gene	retrotransposon protein, putative, Ty3-gypsy subclass, expressed	chr1	36586748	36599448	-	CDS
3	LOC_Os03g11700	pentatricopeptide repeat domain containing protein, putative, expressed	gene	pentatricopeptide repeat domain containing protein, putative, expressed	chr3	6117855	6119196	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g57150	tafazzin, putative, expressed	gene	tafazzin, putative, expressed	chr4	33869192	33873041	-	CDS,three_prime_UTR,downstream
3	LOC_Os04g26240	OsFBDUF21 - F-box and DUF domain containing protein, expressed	gene	OsFBDUF21 - F-box and DUF domain containing protein, expressed	chr4	15288519	15290455	-	CDS
3	LOC_Os06g51390	expressed protein	gene	expressed protein	chr6	31126417	31129684	+	CDS,three_prime_UTR
3	LOC_Os01g57230	BTBN1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed	gene	BTBN1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed	chr1	33063342	33066790	-	three_prime_UTR,promoter
3	LOC_Os03g17840	expressed protein	gene	expressed protein	chr3	9932518	9938994	+	CDS,downstream
3	LOC_Os04g57810	GA18008-PA, putative, expressed	gene	GA18008-PA, putative, expressed	chr4	34238417	34241277	+	CDS,three_prime_UTR
3	LOC_Os11g06300	expressed protein	gene	expressed protein	chr11	3019609	3021033	+	CDS,downstream
3	LOC_Os04g39180	nodulation receptor kinase precursor, putative	gene	nodulation receptor kinase precursor, putative	chr4	23108917	23112860	-	CDS,promoter
3	LOC_Os10g06740	receptor-like protein kinase precursor, putative, expressed	gene	receptor-like protein kinase precursor, putative, expressed	chr10	3499542	3503179	+	CDS,downstream
3	LOC_Os02g29890	expressed protein	gene	expressed protein	chr2	17775171	17779680	+	CDS,three_prime_UTR
3	LOC_Os02g51300	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr2	31404043	31408315	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g33930	farnesyltransferase/geranylgeranyltransferase type-1 subunitalpha, putative, expressed	gene	farnesyltransferase/geranylgeranyltransferase type-1 subunitalpha, putative, expressed	chr9	20023466	20027001	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g41640	expressed protein	gene	expressed protein	chr1	23576193	23579511	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g42510	expressed protein	gene	expressed protein	chr1	24167201	24170397	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g36390	RFC1 - Putative clamp loader of PCNA, replication factor C subunit 1, expressed	gene	RFC1 - Putative clamp loader of PCNA, replication factor C subunit 1, expressed	chr11	20976929	20986788	+	CDS
3	LOC_Os11g41890	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr11	24726853	24731188	+	three_prime_UTR,downstream
3	LOC_Os01g53079	ubiquitin domain-containing protein 1, putative, expressed	gene	ubiquitin domain-containing protein 1, putative, expressed	chr1	30500561	30506149	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g72320	FYVE zinc finger domain containing protein, expressed	gene	FYVE zinc finger domain containing protein, expressed	chr1	41924552	41930559	-	CDS,promoter
3	LOC_Os09g24250	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	gene	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	chr9	14393486	14398473	-	CDS
3	LOC_Os06g41110	tubulin binding cofactor C, putative, expressed	gene	tubulin binding cofactor C, putative, expressed	chr6	24573296	24581104	+	CDS,three_prime_UTR
3	LOC_Os10g33230	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr10	17360036	17365373	+	three_prime_UTR
3	LOC_Os01g50622	DNA-binding protein DSP1, putative, expressed	gene	DNA-binding protein DSP1, putative, expressed	chr1	29071721	29075299	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g13640	expressed protein	gene	expressed protein	chr6	7554195	7557431	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g55164	OsWRKY4 - Superfamily of TFs having WRKY and zinc finger domains	gene	OsWRKY4 - Superfamily of TFs having WRKY and zinc finger domains	chr3	31384275	31391935	+	CDS,promoter
3	LOC_Os10g29274	Leucine rich repeat N-terminal domain containing protein, putative, expressed	gene	Leucine rich repeat N-terminal domain containing protein, putative, expressed	chr10	15158221	15163361	-	three_prime_UTR
3	LOC_Os06g20310	expressed protein	gene	expressed protein	chr6	11668579	11672431	-	CDS,three_prime_UTR
3	LOC_Os01g56390	OsFBX26 - F-box domain containing protein, expressed	gene	OsFBX26 - F-box domain containing protein, expressed	chr1	32507352	32510858	-	three_prime_UTR,downstream
3	LOC_Os08g01350	transmembrane protein 18, putative, expressed	gene	transmembrane protein 18, putative, expressed	chr8	221452	224362	-	CDS,three_prime_UTR
3	LOC_Os03g21940	60S ribosomal protein L19-3, putative, expressed	gene	60S ribosomal protein L19-3, putative, expressed	chr3	12540903	12543410	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g64380	expressed protein	gene	expressed protein	chr3	36380654	36382411	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g09320	nuclear transport factor, putative, expressed	gene	nuclear transport factor, putative, expressed	chr9	4987972	4990687	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g53520	reticulon domain containing protein, putative, expressed	gene	reticulon domain containing protein, putative, expressed	chr1	30737653	30739685	+	three_prime_UTR,downstream
3	LOC_Os09g08390	CRAL/TRIO domain containing protein, expressed	gene	CRAL/TRIO domain containing protein, expressed	chr9	4348564	4354226	-	CDS,three_prime_UTR
3	LOC_Os08g06050	OsTOP6A2 - Topoisomerase 6 subunit A homolog 2, expressed	gene	OsTOP6A2 - Topoisomerase 6 subunit A homolog 2, expressed	chr8	3300042	3303260	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g27300	RNA-binding protein Luc7-like, putative, expressed	gene	RNA-binding protein Luc7-like, putative, expressed	chr7	15867936	15873107	-	CDS,three_prime_UTR
3	LOC_Os07g10770	CESA8 - cellulose synthase, expressed	gene	CESA8 - cellulose synthase, expressed	chr7	5851712	5857719	-	CDS
3	LOC_Os01g62790	expressed protein	gene	expressed protein	chr1	36358666	36364450	+	CDS,three_prime_UTR,promoter
3	LOC_Os04g28060	expressed protein	gene	expressed protein	chr4	16395741	16399088	-	CDS,promoter
3	LOC_Os12g01574	expressed protein	gene	expressed protein	chr12	345323	349645	-	three_prime_UTR
3	LOC_Os03g52070	OsSCP20 - Putative Serine Carboxypeptidase homologue, expressed	gene	OsSCP20 - Putative Serine Carboxypeptidase homologue, expressed	chr3	29864124	29871440	+	CDS
3	LOC_Os08g34970	conserved oligomeric Golgi complex component 3, putative, expressed	gene	conserved oligomeric Golgi complex component 3, putative, expressed	chr8	22011098	22021960	+	CDS
3	LOC_Os11g45710	Os11bglu36  SFR2 homologue, expressed	gene	Os11bglu36  SFR2 homologue, expressed	chr11	27177089	27183618	-	CDS,three_prime_UTR
3	LOC_Os01g61150	phox domain-containing protein, putative, expressed	gene	phox domain-containing protein, putative, expressed	chr1	35395123	35399205	-	CDS,three_prime_UTR
3	LOC_Os02g15970	alpha-hemolysin, putative, expressed	gene	alpha-hemolysin, putative, expressed	chr2	9052611	9056391	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g09860	actin, putative, expressed	gene	actin, putative, expressed	chr4	5286300	5301952	-	CDS,three_prime_UTR
3	LOC_Os04g56540	expressed protein	gene	expressed protein	chr4	33534793	33538146	-	CDS
3	LOC_Os07g39900	interferon-related developmental regulator, putative, expressed	gene	interferon-related developmental regulator, putative, expressed	chr7	23924899	23930229	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g46820	solute carrier family 35 member F5, putative, expressed	gene	solute carrier family 35 member F5, putative, expressed	chr6	28425918	28429248	+	CDS,three_prime_UTR
3	LOC_Os06g07969	cytochrome b-c1 complex subunit 8, putative, expressed	gene	cytochrome b-c1 complex subunit 8, putative, expressed	chr6	3865160	3867201	+	three_prime_UTR
3	LOC_Os06g01170	PHD-finger domain containing protein, expressed	gene	PHD-finger domain containing protein, expressed	chr6	130089	137360	+	CDS,three_prime_UTR
3	LOC_Os01g37130	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr1	20737538	20741386	+	CDS,three_prime_UTR
3	LOC_Os01g08120	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr1	3926450	3928447	-	CDS,promoter
3	LOC_Os12g16130	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr12	9206971	9209075	+	CDS
3	LOC_Os08g22354	polyadenylate-binding protein, putative, expressed	gene	polyadenylate-binding protein, putative, expressed	chr8	13469297	13476757	+	CDS
3	LOC_Os01g17320	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr1	9961605	9965942	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g10430	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr8	6126423	6130395	+	CDS
3	LOC_Os02g10820	Sel1 repeat domain containing protein, putative, expressed	gene	Sel1 repeat domain containing protein, putative, expressed	chr2	5744792	5748141	-	CDS,three_prime_UTR
3	LOC_Os02g10840	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr2	5750295	5753704	-	CDS
3	LOC_Os10g22450	inositol-3-phosphate synthase, putative, expressed	gene	inositol-3-phosphate synthase, putative, expressed	chr10	11553207	11558450	+	three_prime_UTR,downstream
3	LOC_Os12g24240	expressed protein	gene	expressed protein	chr12	13809408	13812794	+	CDS,downstream
3	LOC_Os03g29340	domain of unknown function domain containing protein, expressed	gene	domain of unknown function domain containing protein, expressed	chr3	16691163	16696962	+	three_prime_UTR
3	LOC_Os11g05270	hypothetical protein	gene	hypothetical protein	chr11	2331554	2332567	-	CDS,promoter,downstream
3	LOC_Os12g42550	methyl-CpG binding domain containing protein, putative, expressed	gene	methyl-CpG binding domain containing protein, putative, expressed	chr12	26391714	26396477	-	CDS
3	LOC_Os03g61920	electron transfer flavoprotein subunit alpha, mitochondrial precursor, putative, expressed	gene	electron transfer flavoprotein subunit alpha, mitochondrial precursor, putative, expressed	chr3	35092908	35096470	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g74640	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr1	43224915	43229546	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g04730	dehydrogenase/reductase SDR family member 2, putative, expressed	gene	dehydrogenase/reductase SDR family member 2, putative, expressed	chr9	2511441	2516277	-	CDS
3	LOC_Os01g64720	expressed protein	gene	expressed protein	chr1	37550934	37555459	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g52570	expressed protein	gene	expressed protein	chr4	31069731	31072824	-	CDS,three_prime_UTR
3	LOC_Os08g25090	co-chaperone GrpE protein, putative, expressed	gene	co-chaperone GrpE protein, putative, expressed	chr8	15230136	15233650	-	CDS,three_prime_UTR
3	LOC_Os02g13850	leucine-rich repeat-containing protein kinase family protein, putative, expressed	gene	leucine-rich repeat-containing protein kinase family protein, putative, expressed	chr2	7501283	7513594	+	CDS,three_prime_UTR
3	LOC_Os06g05910	methyltransferase domain containing protein, expressed	gene	methyltransferase domain containing protein, expressed	chr6	2705063	2708711	+	CDS,three_prime_UTR,promoter
3	LOC_Os08g40100	expressed protein	gene	expressed protein	chr8	25382649	25384561	-	three_prime_UTR,promoter,downstream
3	LOC_Os02g27592	expressed protein	gene	expressed protein	chr2	16337400	16339819	-	three_prime_UTR,promoter
3	LOC_Os06g46400	ATCPSF30/CPSF30, putative, expressed	gene	ATCPSF30/CPSF30, putative, expressed	chr6	28150362	28155786	+	CDS
3	LOC_Os01g37850	expressed protein	gene	expressed protein	chr1	21183897	21186381	+	CDS,promoter,downstream
3	LOC_Os07g10490	zeta-carotene desaturase, chloroplast/chromoplast precursor, putative, expressed	gene	zeta-carotene desaturase, chloroplast/chromoplast precursor, putative, expressed	chr7	5644595	5650229	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g03070	tetratricopeptide repeat containing protein, putative, expressed	gene	tetratricopeptide repeat containing protein, putative, expressed	chr7	1164793	1168606	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g22330	clathrin adaptor complex small chain domain containing protein, expressed	gene	clathrin adaptor complex small chain domain containing protein, expressed	chr10	11471906	11474851	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g34830	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr2	20872114	20880308	+	CDS,promoter,downstream
3	LOC_Os01g50960	RNA polymerase II transcriptional coactivator KELP, putative, expressed	gene	RNA polymerase II transcriptional coactivator KELP, putative, expressed	chr1	29279081	29281856	-	CDS,three_prime_UTR
3	LOC_Os04g28040	expressed protein	gene	expressed protein	chr4	16381226	16387399	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g10280	phosphoribosylaminoimidazole carboxylase, chloroplast precursor, putative, expressed	gene	phosphoribosylaminoimidazole carboxylase, chloroplast precursor, putative, expressed	chr1	5405007	5411769	+	three_prime_UTR,CDS,downstream
3	LOC_Os03g30910	disease resistance protein RPM1, putative, expressed	gene	disease resistance protein RPM1, putative, expressed	chr3	17604054	17606533	+	CDS,promoter,downstream
3	LOC_Os03g20380	CAMK_KIN1/SNF1/Nim1_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_KIN1/SNF1/Nim1_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr3	11524990	11530701	-	CDS,five_prime_UTR,three_prime_UTR
3	LOC_Os04g34930	COP9 signalosome complex subunit 8, putative, expressed	gene	COP9 signalosome complex subunit 8, putative, expressed	chr4	21055254	21058806	-	CDS,three_prime_UTR,downstream
3	LOC_Os07g47180	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr7	28205294	28209758	+	CDS,three_prime_UTR
3	LOC_Os02g56960	ribosomal protein, putative, expressed	gene	ribosomal protein, putative, expressed	chr2	34905161	34907655	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g55530	AP003256-AK101847 - NBS/LRR genes that are S-rich,divergent TIR, divergent NBS, expressed	gene	AP003256-AK101847 - NBS/LRR genes that are S-rich,divergent TIR, divergent NBS, expressed	chr1	31991043	31995422	-	CDS,promoter
3	LOC_Os01g40640	S1 RNA binding domain containing protein, expressed	gene	S1 RNA binding domain containing protein, expressed	chr1	22978898	22982132	-	CDS,three_prime_UTR
3	LOC_Os06g12170	expressed protein	gene	expressed protein	chr6	6514440	6518200	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os01g27150	cullin, putative, expressed	gene	cullin, putative, expressed	chr1	15129831	15138578	-	CDS,three_prime_UTR
3	LOC_Os06g40510	CRAL/TRIO domain containing protein	gene	CRAL/TRIO domain containing protein	chr6	24141817	24146314	-	CDS
3	LOC_Os01g68545	expressed protein	gene	expressed protein	chr1	39823824	39825665	-	five_prime_UTR,downstream
3	LOC_Os03g61060	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr3	34681156	34683607	-	three_prime_UTR,promoter
3	LOC_Os01g54930	one zinc finger protein, putative, expressed	gene	one zinc finger protein, putative, expressed	chr1	31591079	31596338	-	CDS,three_prime_UTR
3	LOC_Os11g31620	OsFBL55 - F-box domain and LRR containing protein, expressed	gene	OsFBL55 - F-box domain and LRR containing protein, expressed	chr11	18019166	18024771	-	CDS,three_prime_UTR
3	LOC_Os03g57040	clathrin adaptor complex small chain domain containing protein, expressed	gene	clathrin adaptor complex small chain domain containing protein, expressed	chr3	32506480	32508869	-	three_prime_UTR,promoter
3	LOC_Os04g47520	growth regulator related protein, putative, expressed	gene	growth regulator related protein, putative, expressed	chr4	27996089	28000230	-	CDS,three_prime_UTR
3	LOC_Os03g12840	Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed	gene	Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed	chr3	6900922	6906407	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g62730	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr3	35491683	35499693	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g13380	transmembrane 9 superfamily member, putative, expressed	gene	transmembrane 9 superfamily member, putative, expressed	chr3	7222690	7227122	+	CDS,three_prime_UTR
3	LOC_Os10g34660	expressed protein	gene	expressed protein	chr10	18399671	18403141	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g71590	expressed protein	gene	expressed protein	chr1	41469232	41477467	+	CDS,three_prime_UTR
3	LOC_Os03g19680	enoyl-CoA hydratase/isomerase family protein, putative, expressed	gene	enoyl-CoA hydratase/isomerase family protein, putative, expressed	chr3	11067660	11070152	+	three_prime_UTR
3	LOC_Os11g24824	expressed protein	gene	expressed protein	chr11	13689819	13698462	+	three_prime_UTR
3	LOC_Os07g01030	glycosyl transferase, group 1 domain containing protein, expressed	gene	glycosyl transferase, group 1 domain containing protein, expressed	chr7	16515	20408	+	CDS,three_prime_UTR
3	LOC_Os07g41790	LSM domain containing protein, expressed	gene	LSM domain containing protein, expressed	chr7	25035631	25036762	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g43824	expressed protein	gene	expressed protein	chr4	25759467	25761747	-	CDS,three_prime_UTR
3	LOC_Os06g01230	no apical meristem protein, putative, expressed	gene	no apical meristem protein, putative, expressed	chr6	152391	155618	-	CDS,three_prime_UTR
3	LOC_Os10g39500	expressed protein	gene	expressed protein	chr10	21020456	21025141	+	CDS
3	LOC_Os01g62820	Transcription initiation factor TFIID subunit A containing protein, expressed	gene	Transcription initiation factor TFIID subunit A containing protein, expressed	chr1	36384582	36389368	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g31650	expressed protein	gene	expressed protein	chr7	18799975	18805196	+	CDS
3	LOC_Os03g43020	prefoldin subunit, putative, expressed	gene	prefoldin subunit, putative, expressed	chr3	23997086	24001363	-	CDS
3	LOC_Os02g19970	aminotransferase, classes I and II, domain containing protein, expressed	gene	aminotransferase, classes I and II, domain containing protein, expressed	chr2	11749116	11753782	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g01620	kinase, pfkB family, putative, expressed	gene	kinase, pfkB family, putative, expressed	chr1	308459	312170	-	CDS,promoter
3	LOC_Os05g06710	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr5	3492593	3496736	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g07850	PolI-like DNA polymerase, putative	gene	PolI-like DNA polymerase, putative	chr8	4406123	4415927	-	CDS,promoter
3	LOC_Os12g34890	acyl carrier protein, putative, expressed	gene	acyl carrier protein, putative, expressed	chr12	21206933	21209969	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g09280	myb-related transcription activator, putative, expressed	gene	myb-related transcription activator, putative, expressed	chr1	4713468	4717746	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g51990	ACT domain containing protein, expressed	gene	ACT domain containing protein, expressed	chr3	29829299	29831297	+	CDS,downstream
3	LOC_Os04g52120	potassium transporter, putative, expressed	gene	potassium transporter, putative, expressed	chr4	30767378	30772499	-	CDS,three_prime_UTR
3	LOC_Os09g29380	expressed protein	gene	expressed protein	chr9	17834904	17837027	+	CDS,three_prime_UTR
3	LOC_Os03g11874	expressed protein	gene	expressed protein	chr3	6217055	6224078	-	CDS
3	LOC_Os06g01260	glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed	gene	glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed	chr6	166364	173331	+	CDS
3	LOC_Os08g13905	expressed protein	gene	expressed protein	chr8	8302874	8306355	+	three_prime_UTR
3	LOC_Os01g68970	HYS1, putative, expressed	gene	HYS1, putative, expressed	chr1	40069709	40072721	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g19280	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr9	11539746	11542435	-	CDS,promoter
3	LOC_Os03g08530	aminotransferase, classes I and II, domain containing protein, expressed	gene	aminotransferase, classes I and II, domain containing protein, expressed	chr3	4383013	4388388	-	CDS,three_prime_UTR
3	LOC_Os05g34630	hydrolase, alpha/beta fold family domain containing protein, expressed	gene	hydrolase, alpha/beta fold family domain containing protein, expressed	chr5	20473717	20477285	-	CDS,three_prime_UTR
3	LOC_Os01g56949	homeobox-leucine zipper protein ATHB-54, putative, expressed	gene	homeobox-leucine zipper protein ATHB-54, putative, expressed	chr1	32899847	32901584	+	three_prime_UTR,downstream
3	LOC_Os02g48390	phosphoribosyl transferase, putative, expressed	gene	phosphoribosyl transferase, putative, expressed	chr2	29619587	29622249	+	three_prime_UTR,promoter,downstream
3	LOC_Os07g23520	expressed protein	gene	expressed protein	chr7	13286612	13292352	-	CDS,three_prime_UTR
3	LOC_Os11g20310	expressed protein	gene	expressed protein	chr11	11730395	11733644	-	CDS,three_prime_UTR
3	LOC_Os02g35770	homeobox associated leucine zipper, putative, expressed	gene	homeobox associated leucine zipper, putative, expressed	chr2	21481726	21484025	-	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os12g02130	expressed protein	gene	expressed protein	chr12	644370	650370	+	CDS,three_prime_UTR
3	LOC_Os01g73234	thioredoxin, putative, expressed	gene	thioredoxin, putative, expressed	chr1	42450072	42453265	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g46310	expressed protein	gene	expressed protein	chr3	26191489	26194533	+	CDS,three_prime_UTR
3	LOC_Os06g47950	tetratricopeptide-like helical, putative, expressed	gene	tetratricopeptide-like helical, putative, expressed	chr6	28994479	28996359	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g47760	DnaK family protein, putative, expressed	gene	DnaK family protein, putative, expressed	chr11	28281027	28285329	+	CDS
3	LOC_Os10g31790	ubiquitin family protein, putative, expressed	gene	ubiquitin family protein, putative, expressed	chr10	16594587	16602237	-	CDS
3	LOC_Os01g49330	formyl transferase, putative, expressed	gene	formyl transferase, putative, expressed	chr1	28362994	28367269	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g09300	oxidoreductase, putative, expressed	gene	oxidoreductase, putative, expressed	chr1	4725659	4730243	+	CDS,downstream
3	LOC_Os12g38950	zinc finger, C2H2 type family protein, expressed	gene	zinc finger, C2H2 type family protein, expressed	chr12	23914654	23918334	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g72780	expressed protein	gene	expressed protein	chr1	42215932	42227026	+	CDS,three_prime_UTR
3	LOC_Os01g64256	transposon protein, putative, Mutator sub-class, expressed	gene	transposon protein, putative, Mutator sub-class, expressed	chr1	37307050	37309269	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g49960	expressed protein	gene	expressed protein	chr2	30518796	30521042	+	three_prime_UTR,downstream
3	LOC_Os07g49520	2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor, putative, expressed	gene	2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor, putative, expressed	chr7	29655868	29661517	+	CDS,promoter
3	LOC_Os04g58960	regulator of chromosome condensation, putative, expressed	gene	regulator of chromosome condensation, putative, expressed	chr4	34882169	34889801	-	CDS
3	LOC_Os10g04620	OsPOP20 - Putative Prolyl Oligopeptidase homologue, expressed	gene	OsPOP20 - Putative Prolyl Oligopeptidase homologue, expressed	chr10	2200470	2205712	+	CDS,three_prime_UTR
3	LOC_Os08g32870	aldehyde dehydrogenase, putative, expressed	gene	aldehyde dehydrogenase, putative, expressed	chr8	20377081	20383348	+	CDS,downstream
3	LOC_Os11g04170	CAMK_CAMK_like.42 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.42 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr11	1690862	1693302	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g55340	WD domain and HEAT domain containing protein, putative, expressed	gene	WD domain and HEAT domain containing protein, putative, expressed	chr2	33879976	33887906	-	CDS
3	LOC_Os02g57180	NADH dehydrogenase 1 alpha subcomplex subunit 9,mitochondrial precursor, putative, expressed	gene	NADH dehydrogenase 1 alpha subcomplex subunit 9,mitochondrial precursor, putative, expressed	chr2	35007697	35011783	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g48300	histidine acid phosphatase, putative, expressed	gene	histidine acid phosphatase, putative, expressed	chr3	27480211	27497017	+	CDS
3	LOC_Os03g43840	LSD1 zinc finger domain containing protein, expressed	gene	LSD1 zinc finger domain containing protein, expressed	chr3	24572386	24577380	-	CDS,three_prime_UTR
3	LOC_Os12g16524	glutaredoxin-C8 precursor, putative, expressed	gene	glutaredoxin-C8 precursor, putative, expressed	chr12	9463652	9465727	+	three_prime_UTR
3	LOC_Os01g18360	OsIAA4 - Auxin-responsive Aux/IAA gene family member, expressed	gene	OsIAA4 - Auxin-responsive Aux/IAA gene family member, expressed	chr1	10311317	10313802	+	CDS,three_prime_UTR
3	LOC_Os07g13969	expressed protein	gene	expressed protein	chr7	7981506	7982600	+	three_prime_UTR
3	LOC_Os11g28365	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	gene	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	chr11	15857251	15859992	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g42110	cell division control protein 48 homolog B, putative, expressed	gene	cell division control protein 48 homolog B, putative, expressed	chr4	24746946	24750939	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g65986	DUF803 domain containing, putative, expressed	gene	DUF803 domain containing, putative, expressed	chr1	38298956	38304599	+	CDS
3	LOC_Os05g38550	ubiquitin-conjugating enzyme, putative, expressed	gene	ubiquitin-conjugating enzyme, putative, expressed	chr5	22553286	22557767	+	CDS,three_prime_UTR
3	LOC_Os03g12160	leucine-rich repeat family protein, putative, expressed	gene	leucine-rich repeat family protein, putative, expressed	chr3	6376128	6387758	-	CDS
3	LOC_Os06g37640	expressed protein	gene	expressed protein	chr6	22291249	22300033	-	CDS
3	LOC_Os02g10470	EF hand family protein, putative, expressed	gene	EF hand family protein, putative, expressed	chr2	5501165	5504381	+	CDS
3	LOC_Os01g66500	phosphoribosylformylglycinamidine synthase, putative, expressed	gene	phosphoribosylformylglycinamidine synthase, putative, expressed	chr1	38617693	38622793	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g39890	OsSPL14 - SBP-box gene family member, expressed	gene	OsSPL14 - SBP-box gene family member, expressed	chr8	25271735	25275982	-	three_prime_UTR,promoter
3	LOC_Os12g06850	transcription elongation factor protein, putative, expressed	gene	transcription elongation factor protein, putative, expressed	chr12	3324750	3328117	-	CDS,three_prime_UTR
3	LOC_Os02g13530	40S ribosomal protein S24, putative, expressed	gene	40S ribosomal protein S24, putative, expressed	chr2	7258483	7260380	-	three_prime_UTR,promoter
3	LOC_Os06g12160	AAA-type ATPase family protein, putative, expressed	gene	AAA-type ATPase family protein, putative, expressed	chr6	6502736	6513400	-	CDS,three_prime_UTR
3	LOC_Os03g01420	expressed protein	gene	expressed protein	chr3	294311	296898	-	three_prime_UTR
3	LOC_Os03g16140	digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed	gene	digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed	chr3	8901642	8905292	-	CDS,three_prime_UTR
3	LOC_Os07g42650	expressed protein	gene	expressed protein	chr7	25534925	25538306	+	CDS,three_prime_UTR
3	LOC_Os04g42670	OsFBL19 - F-box domain and LRR containing protein, expressed	gene	OsFBL19 - F-box domain and LRR containing protein, expressed	chr4	25058870	25061490	-	three_prime_UTR
3	LOC_Os03g08624	dihydroflavonol-4-reductase, putative, expressed	gene	dihydroflavonol-4-reductase, putative, expressed	chr3	4440958	4442836	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g41900	SET domain containing protein, expressed	gene	SET domain containing protein, expressed	chr12	25933830	25942444	-	three_prime_UTR,promoter
3	LOC_Os09g26700	choline/ethanolamine kinase, putative, expressed	gene	choline/ethanolamine kinase, putative, expressed	chr9	16223957	16228507	+	CDS,three_prime_UTR
3	LOC_Os10g11810	dehydrogenase, putative, expressed	gene	dehydrogenase, putative, expressed	chr10	6556409	6559864	+	five_prime_UTR,CDS
3	LOC_Os02g26614	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr2	15615138	15624114	+	CDS
3	LOC_Os01g73970	lysine ketoglutarate reductase trans-splicing related 1, putative, expressed	gene	lysine ketoglutarate reductase trans-splicing related 1, putative, expressed	chr1	42847184	42851966	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g59220	cytochrome b-c1 complex subunit 7, putative, expressed	gene	cytochrome b-c1 complex subunit 7, putative, expressed	chr3	33711397	33713603	+	CDS,three_prime_UTR
3	LOC_Os02g53700	DENN domain containing protein, expressed	gene	DENN domain containing protein, expressed	chr2	32852281	32864539	-	CDS,three_prime_UTR
3	LOC_Os01g12480	expressed protein	gene	expressed protein	chr1	6840526	6842538	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g35300	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr2	21219175	21222864	+	three_prime_UTR,downstream
3	LOC_Os09g24570	growth regulator related protein, putative, expressed	gene	growth regulator related protein, putative, expressed	chr9	14628655	14631858	-	CDS,three_prime_UTR
3	LOC_Os01g62070	cation efflux family protein, putative, expressed	gene	cation efflux family protein, putative, expressed	chr1	35915691	35920926	-	CDS,three_prime_UTR
3	LOC_Os07g43316	SAP domain-containing protein, putative, expressed	gene	SAP domain-containing protein, putative, expressed	chr7	25932054	25935546	+	CDS
3	LOC_Os09g04210	hydrolase/ zinc ion binding protein, putative, expressed	gene	hydrolase/ zinc ion binding protein, putative, expressed	chr9	2211160	2221909	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g28470	hypothetical protein	gene	hypothetical protein	chr5	16604742	16610993	+	CDS,downstream
3	LOC_Os03g53880	serine/threonine-protein kinase TOUSLED, putative, expressed	gene	serine/threonine-protein kinase TOUSLED, putative, expressed	chr3	30882987	30892798	-	CDS,three_prime_UTR,downstream
3	LOC_Os07g34030	OsPDIL5-4  protein disulfide isomerase PDIL5-4, expressed	gene	OsPDIL5-4  protein disulfide isomerase PDIL5-4, expressed	chr7	20340013	20346769	+	CDS,three_prime_UTR
3	LOC_Os03g03710	ribonuclease protein, putative, expressed	gene	ribonuclease protein, putative, expressed	chr3	1652192	1660438	-	CDS,three_prime_UTR
3	LOC_Os01g52640	suppressor of phythchrome A, putative, expressed	gene	suppressor of phythchrome A, putative, expressed	chr1	30256707	30262944	+	three_prime_UTR
3	LOC_Os02g44220	peroxisomal biogenesis factor 19, putative, expressed	gene	peroxisomal biogenesis factor 19, putative, expressed	chr2	26756775	26760619	-	CDS,three_prime_UTR
3	LOC_Os05g18790	formyl transferase, putative, expressed	gene	formyl transferase, putative, expressed	chr5	10914180	10915936	+	CDS,downstream
3	LOC_Os09g14960	transposon protein, putative, Pong sub-class, expressed	gene	transposon protein, putative, Pong sub-class, expressed	chr9	8968315	8972896	-	five_prime_UTR,CDS
3	LOC_Os03g11590	integral membrane protein, putative, expressed	gene	integral membrane protein, putative, expressed	chr3	6012137	6016199	-	CDS,three_prime_UTR
3	LOC_Os02g39040	mTERF domain containing protein, expressed	gene	mTERF domain containing protein, expressed	chr2	23569911	23572413	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g35730	hydrolase, alpha/beta fold family domain containing protein, expressed	gene	hydrolase, alpha/beta fold family domain containing protein, expressed	chr5	21145347	21151872	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os11g29120	growth regulator related protein, putative, expressed	gene	growth regulator related protein, putative, expressed	chr11	16401188	16406907	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g45080	expressed protein	gene	expressed protein	chr8	28292340	28302627	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g17840	expressed protein	gene	expressed protein	chr6	10343190	10357412	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g27960	transmembrane protein 50A, putative, expressed	gene	transmembrane protein 50A, putative, expressed	chr9	16986938	16989466	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g45880	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr1	26059744	26069855	-	CDS,three_prime_UTR
3	LOC_Os01g27040	chromatin-remodeling complex ATPase chain, putative, expressed	gene	chromatin-remodeling complex ATPase chain, putative, expressed	chr1	15074836	15082279	-	CDS,three_prime_UTR
3	LOC_Os03g12910	squalene monooxygenase, putative, expressed	gene	squalene monooxygenase, putative, expressed	chr3	6956630	6961592	-	CDS
3	LOC_Os05g24560	NC domain-containing protein, putative, expressed	gene	NC domain-containing protein, putative, expressed	chr5	14108242	14110748	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g48690	transcription factor like protein, putative, expressed	gene	transcription factor like protein, putative, expressed	chr5	27836412	27839857	+	three_prime_UTR
3	LOC_Os10g32860	expressed protein	gene	expressed protein	chr10	17127211	17129345	+	CDS,downstream
3	LOC_Os10g28360	1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase protein, putative, expressed	gene	1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase protein, putative, expressed	chr10	14685890	14688547	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g10810	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	5875791	5878801	+	CDS
3	LOC_Os04g57410	methylthioribose kinase, putative, expressed	gene	methylthioribose kinase, putative, expressed	chr4	33976625	33979257	-	CDS,promoter
3	LOC_Os03g63200	powdery mildew resistance protein PM3b, putative, expressed	gene	powdery mildew resistance protein PM3b, putative, expressed	chr3	35703173	35708645	-	CDS
3	LOC_Os04g35780	expressed protein	gene	expressed protein	chr4	21627249	21629997	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g35020	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr8	22057333	22062431	+	CDS,three_prime_UTR
3	LOC_Os10g40410	expressed protein	gene	expressed protein	chr10	21580510	21583616	+	CDS,three_prime_UTR
3	LOC_Os02g12939	expressed protein	gene	expressed protein	chr2	6831023	6835681	-	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os08g44760	domain of unknown function DUF966 domain containing protein, expressed	gene	domain of unknown function DUF966 domain containing protein, expressed	chr8	28120580	28123922	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g06454	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr1	3040412	3043348	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g04370	ribosomal protein L24, putative, expressed	gene	ribosomal protein L24, putative, expressed	chr11	1812629	1815762	-	CDS,three_prime_UTR
3	LOC_Os06g41770	bZIP transcription factor domain containing protein, expressed	gene	bZIP transcription factor domain containing protein, expressed	chr6	25040775	25043114	+	three_prime_UTR
3	LOC_Os05g05460	EF hand family protein, putative, expressed	gene	EF hand family protein, putative, expressed	chr5	2716119	2718370	-	three_prime_UTR,promoter,downstream
3	LOC_Os02g38840	glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform, putative, expressed	gene	glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform, putative, expressed	chr2	23474346	23480943	+	CDS
3	LOC_Os07g27490	Regulator of chromosome condensation domain containing protein, expressed	gene	Regulator of chromosome condensation domain containing protein, expressed	chr7	16028462	16032432	+	CDS,three_prime_UTR
3	LOC_Os06g07820	BSD domain containing protein, expressed	gene	BSD domain containing protein, expressed	chr6	3794465	3797624	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g55510	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr4	32837603	32843274	+	CDS
3	LOC_Os01g64730	bZIP transcription factor domain containing protein, expressed	gene	bZIP transcription factor domain containing protein, expressed	chr1	37555631	37559061	-	three_prime_UTR,promoter
3	LOC_Os02g46380	purine permease, putative, expressed	gene	purine permease, putative, expressed	chr2	28260685	28263757	+	CDS,three_prime_UTR
3	LOC_Os01g15780	glycosyl transferase, group 1 domain containing protein, expressed	gene	glycosyl transferase, group 1 domain containing protein, expressed	chr1	8884505	8891462	-	CDS,three_prime_UTR
3	LOC_Os02g03930	expressed protein	gene	expressed protein	chr2	1667744	1672318	-	three_prime_UTR,promoter,downstream
3	LOC_Os06g06930	receptor-like protein kinase, putative	gene	receptor-like protein kinase, putative	chr6	3285676	3288132	-	CDS,promoter
3	LOC_Os03g38950	chloroplast post-illumination chlorophyll fluorescence increase protein, putative, expressed	gene	chloroplast post-illumination chlorophyll fluorescence increase protein, putative, expressed	chr3	21633377	21635753	+	three_prime_UTR,downstream
3	LOC_Os06g50539	expressed protein	gene	expressed protein	chr6	30599222	30601809	+	three_prime_UTR,downstream
3	LOC_Os03g40010	DEK C terminal domain containing protein, expressed	gene	DEK C terminal domain containing protein, expressed	chr3	22217750	22225728	-	CDS
3	LOC_Os12g02960	glutathione S-transferase, putative, expressed	gene	glutathione S-transferase, putative, expressed	chr12	1096476	1097454	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g44530	expressed protein	gene	expressed protein	chr4	26178803	26183251	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g55830	glutathione S-transferase, putative, expressed	gene	glutathione S-transferase, putative, expressed	chr1	32147008	32151072	-	CDS
3	LOC_Os07g33680	succinate dehydrogenase subunit 3, putative, expressed	gene	succinate dehydrogenase subunit 3, putative, expressed	chr7	20126045	20127840	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g22160	relA-SpoT like protein RSH1, putative, expressed	gene	relA-SpoT like protein RSH1, putative, expressed	chr3	12693964	12705175	+	CDS,three_prime_UTR
3	LOC_Os02g48370	ARID/BRIGHT DNA-binding domain-containing protein, putative, expressed	gene	ARID/BRIGHT DNA-binding domain-containing protein, putative, expressed	chr2	29605287	29610422	-	CDS,three_prime_UTR
3	LOC_Os03g35340	expressed protein	gene	expressed protein	chr3	19583938	19603130	-	CDS
3	LOC_Os02g37080	ASC1, putative, expressed	gene	ASC1, putative, expressed	chr2	22401834	22406455	-	CDS,three_prime_UTR
3	LOC_Os06g10730	expressed protein	gene	expressed protein	chr6	5600749	5603985	+	three_prime_UTR
3	LOC_Os02g48640	expressed protein	gene	expressed protein	chr2	29780313	29783975	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g27760	peptide methionine sulfoxide reductase msrB, putative, expressed	gene	peptide methionine sulfoxide reductase msrB, putative, expressed	chr6	15717518	15720375	-	three_prime_UTR
3	LOC_Os05g42220	leucine rich repeat domain containing protein, putative, expressed	gene	leucine rich repeat domain containing protein, putative, expressed	chr5	24628675	24632907	+	CDS
3	LOC_Os04g40930	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr4	24111311	24116072	+	CDS,three_prime_UTR
3	LOC_Os01g26370	expressed protein	gene	expressed protein	chr1	14954674	14958343	+	CDS,three_prime_UTR
3	LOC_Os02g39630	iron-stress related protein, putative, expressed	gene	iron-stress related protein, putative, expressed	chr2	23903531	23907774	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g47890	OsFBO9 - F-box and other domain containing protein, expressed	gene	OsFBO9 - F-box and other domain containing protein, expressed	chr6	28968490	28973578	-	CDS,three_prime_UTR
3	LOC_Os01g14040	D-tyrosyl-tRNA, putative, expressed	gene	D-tyrosyl-tRNA, putative, expressed	chr1	7856826	7859061	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g41990	expressed protein	gene	expressed protein	chr2	25225778	25233405	+	CDS,three_prime_UTR
3	LOC_Os03g26044	CSLA5 - cellulose synthase-like family A; mannan synthase, expressed	gene	CSLA5 - cellulose synthase-like family A; mannan synthase, expressed	chr3	14923845	14929043	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g19260	tetratricopeptide-like helical, putative, expressed	gene	tetratricopeptide-like helical, putative, expressed	chr12	11163149	11166667	-	CDS
3	LOC_Os03g48840	ribosomal L18p/L5e family protein, putative, expressed	gene	ribosomal L18p/L5e family protein, putative, expressed	chr3	27816082	27818772	+	CDS,three_prime_UTR,five_prime_UTR,downstream
3	LOC_Os01g50340	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr1	28891845	28896229	+	CDS,three_prime_UTR
3	LOC_Os07g47500	histone-arginine methyltransferase CARM1, putative, expressed	gene	histone-arginine methyltransferase CARM1, putative, expressed	chr7	28401324	28408667	+	CDS,three_prime_UTR
3	LOC_Os04g53998	kinase, putative, expressed	gene	kinase, putative, expressed	chr4	31993026	31997139	-	CDS,three_prime_UTR
3	LOC_Os09g29790	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr9	18100203	18108312	-	CDS,promoter
3	LOC_Os12g42760	type IIB DNA topoisomerase, putative, expressed	gene	type IIB DNA topoisomerase, putative, expressed	chr12	26544351	26547435	+	CDS,three_prime_UTR
3	LOC_Os07g32670	expressed protein	gene	expressed protein	chr7	19499840	19504166	+	CDS
3	LOC_Os04g46930	serine racemase, putative, expressed	gene	serine racemase, putative, expressed	chr4	27638675	27641457	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g59400	expressed protein	gene	expressed protein	chr4	35131975	35139323	+	three_prime_UTR,promoter
3	LOC_Os09g12790	potassium channel protein, putative, expressed	gene	potassium channel protein, putative, expressed	chr9	7335374	7339496	-	CDS
3	LOC_Os06g05090	methyltransferase domain containing protein, expressed	gene	methyltransferase domain containing protein, expressed	chr6	2246853	2249861	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g07680	RNase P subunit p30, putative, expressed	gene	RNase P subunit p30, putative, expressed	chr12	3860310	3862882	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g18660	expressed protein	gene	expressed protein	chr2	10870288	10874616	+	three_prime_UTR
3	LOC_Os02g14770	phosphoenolpyruvate carboxylase, putative, expressed	gene	phosphoenolpyruvate carboxylase, putative, expressed	chr2	8172418	8184219	-	CDS,three_prime_UTR
3	LOC_Os01g57490	D-mannose binding lectin family protein	gene	D-mannose binding lectin family protein	chr1	33217350	33222700	+	CDS,promoter
3	LOC_Os06g40370	CAMK_KIN1/SNF1/Nim1_like.27 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_KIN1/SNF1/Nim1_like.27 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr6	24037929	24043794	-	CDS
3	LOC_Os12g18110	PQ loop repeat domain containing protein, expressed	gene	PQ loop repeat domain containing protein, expressed	chr12	10415076	10423241	-	CDS,three_prime_UTR
3	LOC_Os02g55310	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr2	33851271	33853536	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g04600	expressed protein	gene	expressed protein	chr1	2062612	2065083	-	CDS,three_prime_UTR
3	LOC_Os01g12080	plant-specific domain TIGR01589 family protein, putative, expressed	gene	plant-specific domain TIGR01589 family protein, putative, expressed	chr1	6571023	6576171	-	CDS,three_prime_UTR
3	LOC_Os03g10469	glycosyl hydrolase family 10 protein, putative, expressed	gene	glycosyl hydrolase family 10 protein, putative, expressed	chr3	5325711	5329595	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g13470	expressed protein	gene	expressed protein	chr4	7499267	7513176	+	CDS,three_prime_UTR
3	LOC_Os02g38080	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr2	22994107	22999452	+	CDS,three_prime_UTR
3	LOC_Os12g02750	expressed protein	gene	expressed protein	chr12	970331	974926	+	three_prime_UTR
3	LOC_Os02g26294	expressed protein	gene	expressed protein	chr2	15435305	15440317	-	five_prime_UTR,three_prime_UTR
3	LOC_Os01g48020	S-locus-like receptor protein kinase, putative, expressed	gene	S-locus-like receptor protein kinase, putative, expressed	chr1	27483090	27485426	-	CDS,downstream
3	LOC_Os02g01920	GHMP kinases ATP-binding protein, putative, expressed	gene	GHMP kinases ATP-binding protein, putative, expressed	chr2	496936	500134	-	CDS,downstream
3	LOC_Os07g16130	acetyltransferase, GNAT family, putative, expressed	gene	acetyltransferase, GNAT family, putative, expressed	chr7	9394371	9396533	+	CDS,three_prime_UTR
3	LOC_Os02g09140	bfr-2, putative, expressed	gene	bfr-2, putative, expressed	chr2	4690515	4693587	+	CDS,downstream
3	LOC_Os04g46880	transporter, major facilitator family, putative, expressed	gene	transporter, major facilitator family, putative, expressed	chr4	27598340	27602031	-	CDS
3	LOC_Os06g28990	transposon protein, putative, Mutator sub-class, expressed	gene	transposon protein, putative, Mutator sub-class, expressed	chr6	16519652	16525031	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g39780	expressed protein	gene	expressed protein	chr1	22434968	22437347	+	CDS,downstream
3	LOC_Os06g19390	expressed protein	gene	expressed protein	chr6	11039141	11042315	+	three_prime_UTR,downstream
3	LOC_Os05g06840	POLE2A - Putative DNA polymerase epsilon complex subunit, expressed	gene	POLE2A - Putative DNA polymerase epsilon complex subunit, expressed	chr5	3580546	3585712	+	CDS,three_prime_UTR
3	LOC_Os04g40850	26S proteasome non-ATPase regulatory subunit 6, putative, expressed	gene	26S proteasome non-ATPase regulatory subunit 6, putative, expressed	chr4	24055782	24058631	+	three_prime_UTR,downstream
3	LOC_Os06g22870	OsIAA21 - Auxin-responsive Aux/IAA gene family member, expressed	gene	OsIAA21 - Auxin-responsive Aux/IAA gene family member, expressed	chr6	13344334	13348183	+	CDS,three_prime_UTR
3	LOC_Os12g01370	fatty acid desaturase, putative, expressed	gene	fatty acid desaturase, putative, expressed	chr12	225239	229189	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g35020	yippee zinc-binding protein, putative, expressed	gene	yippee zinc-binding protein, putative, expressed	chr11	20052277	20054046	-	three_prime_UTR,promoter
3	LOC_Os07g49530	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr7	29662370	29665322	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g50370	zinc finger, C3HC4 type, domain containing protein, expressed	gene	zinc finger, C3HC4 type, domain containing protein, expressed	chr6	30491762	30495153	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g42724	VHS and GAT domain containing protein, expressed	gene	VHS and GAT domain containing protein, expressed	chr10	22980611	22983543	+	CDS,promoter,downstream
3	LOC_Os03g21550	eukaryotic translation initiation factor 2 subunit beta, putative, expressed	gene	eukaryotic translation initiation factor 2 subunit beta, putative, expressed	chr3	12314420	12319445	+	CDS
3	LOC_Os05g31530	disease resistance protein RGA4, putative, expressed	gene	disease resistance protein RGA4, putative, expressed	chr5	18280835	18286583	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g53990	expressed protein	gene	expressed protein	chr3	30947390	30952248	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g57680	aldehyde oxidase, putative, expressed	gene	aldehyde oxidase, putative, expressed	chr3	32862352	32870076	-	CDS
3	LOC_Os05g40410	expressed protein	gene	expressed protein	chr5	23680893	23685016	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g46490	phosphatidylinositol-4-phosphate 5-kinase, putative, expressed	gene	phosphatidylinositol-4-phosphate 5-kinase, putative, expressed	chr7	27751728	27756312	-	CDS,three_prime_UTR
3	LOC_Os02g06210	phytosulfokine receptor precursor, putative, expressed	gene	phytosulfokine receptor precursor, putative, expressed	chr2	3102629	3111444	-	CDS
3	LOC_Os09g35690	zinc RING finger protein, putative, expressed	gene	zinc RING finger protein, putative, expressed	chr9	20527998	20531769	-	CDS,three_prime_UTR
3	LOC_Os08g10330	SHR5-receptor-like kinase, putative, expressed	gene	SHR5-receptor-like kinase, putative, expressed	chr8	6039531	6047621	+	CDS
3	LOC_Os07g36190	hydrolase, NUDIX family, domain containing protein, expressed	gene	hydrolase, NUDIX family, domain containing protein, expressed	chr7	21624626	21627833	+	CDS,promoter
3	LOC_Os08g33420	agenet domain containing protein, expressed	gene	agenet domain containing protein, expressed	chr8	20845311	20850294	+	CDS,three_prime_UTR
3	LOC_Os03g08010	elongation factor Tu, putative	gene	elongation factor Tu, putative	chr3	4094190	4096235	+	CDS,promoter
3	LOC_Os02g57410	OTU-like cysteine protease family protein, putative, expressed	gene	OTU-like cysteine protease family protein, putative, expressed	chr2	35172373	35178289	-	CDS,three_prime_UTR
3	LOC_Os07g42300	elongation factor protein, putative, expressed	gene	elongation factor protein, putative, expressed	chr7	25312559	25315683	-	three_prime_UTR
3	LOC_Os04g37950	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	gene	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	chr4	22382202	22388483	-	CDS,three_prime_UTR
3	LOC_Os02g53830	MTD1, putative, expressed	gene	MTD1, putative, expressed	chr2	32959850	32962898	+	three_prime_UTR
3	LOC_Os07g47710	60S ribosomal protein L22-2, putative, expressed	gene	60S ribosomal protein L22-2, putative, expressed	chr7	28499923	28501634	+	three_prime_UTR,downstream
3	LOC_Os12g37720	zinc knuckle family protein, expressed	gene	zinc knuckle family protein, expressed	chr12	23123144	23131123	-	CDS,promoter
3	LOC_Os03g59530	protein Kinase-associated protein phosphatase, putative, expressed	gene	protein Kinase-associated protein phosphatase, putative, expressed	chr3	33879690	33884757	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g14410	expressed protein	gene	expressed protein	chr9	8509737	8515543	-	CDS
3	LOC_Os04g46450	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr4	27366219	27374935	-	CDS,three_prime_UTR
3	LOC_Os07g05365	photosystem II 10 kDa polypeptide, chloroplast precursor, putative, expressed	gene	photosystem II 10 kDa polypeptide, chloroplast precursor, putative, expressed	chr7	2455969	2457152	+	three_prime_UTR,downstream
3	LOC_Os07g49010	TOPBP1B - Similar to DNA replication protein TOPBP1 from, expressed	gene	TOPBP1B - Similar to DNA replication protein TOPBP1 from, expressed	chr7	29341996	29349844	-	CDS,downstream
3	LOC_Os03g46460	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	gene	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	chr3	26276162	26280225	+	three_prime_UTR
3	LOC_Os04g31400	expressed protein	gene	expressed protein	chr4	18607666	18611500	+	CDS
3	LOC_Os03g46550	RGH1A, putative, expressed	gene	RGH1A, putative, expressed	chr3	26330775	26335030	+	CDS
3	LOC_Os10g31000	ubiquitin-conjugating enzyme, putative, expressed	gene	ubiquitin-conjugating enzyme, putative, expressed	chr10	16109570	16113807	+	three_prime_UTR,CDS
3	LOC_Os11g10370	OsFBX418 - F-box domain containing protein, expressed	gene	OsFBX418 - F-box domain containing protein, expressed	chr11	5623268	5624790	-	three_prime_UTR,promoter,downstream
3	LOC_Os06g06730	methyltransferase-like protein 5, putative, expressed	gene	methyltransferase-like protein 5, putative, expressed	chr6	3153275	3157431	-	CDS,three_prime_UTR
3	LOC_Os10g39950	viral A-type inclusion protein repeat containing protein, expressed	gene	viral A-type inclusion protein repeat containing protein, expressed	chr10	21318303	21328009	-	CDS,three_prime_UTR
3	LOC_Os02g01560	40S ribosomal protein S4, putative, expressed	gene	40S ribosomal protein S4, putative, expressed	chr2	316555	319129	-	CDS,three_prime_UTR
3	LOC_Os11g07500	DSHCT domain containing protein, expressed	gene	DSHCT domain containing protein, expressed	chr11	3797366	3804489	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g12800	expressed protein	gene	expressed protein	chr7	7320541	7322795	+	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g43230	expressed protein	gene	expressed protein	chr4	25395754	25398021	-	three_prime_UTR,promoter
3	LOC_Os01g74030	pumilio-family RNA binding protein, putative, expressed	gene	pumilio-family RNA binding protein, putative, expressed	chr1	42875495	42881920	-	CDS,three_prime_UTR
3	LOC_Os08g13469	expressed protein	gene	expressed protein	chr8	8017578	8020722	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g31770	expressed protein	gene	expressed protein	chr12	19090750	19094013	+	three_prime_UTR,downstream
3	LOC_Os03g26000	expressed protein	gene	expressed protein	chr3	14898474	14905620	+	three_prime_UTR
3	LOC_Os12g39210	cyclin, putative, expressed	gene	cyclin, putative, expressed	chr12	24109067	24111320	+	three_prime_UTR,promoter,downstream
3	LOC_Os04g04020	protein transport protein Sec24-like, putative, expressed	gene	protein transport protein Sec24-like, putative, expressed	chr4	1853511	1860834	+	CDS,three_prime_UTR
3	LOC_Os02g45490	expressed protein	gene	expressed protein	chr2	27662039	27665556	-	three_prime_UTR,promoter
3	LOC_Os09g35830	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr9	20612907	20625385	+	three_prime_UTR
3	LOC_Os10g40290	pectinacetylesterase domain containing protein, expressed	gene	pectinacetylesterase domain containing protein, expressed	chr10	21522766	21527717	-	CDS
3	LOC_Os06g10620	transcription elongation factor SPT5 homolog 1, putative, expressed	gene	transcription elongation factor SPT5 homolog 1, putative, expressed	chr6	5522781	5527577	-	CDS
3	LOC_Os07g19460	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr7	11504610	11508634	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g38500	mitochondrial glycoprotein, putative, expressed	gene	mitochondrial glycoprotein, putative, expressed	chr9	22152193	22155128	-	three_prime_UTR,promoter
3	LOC_Os01g63710	CDC6 - Putative DNA replication initiation protein, expressed	gene	CDC6 - Putative DNA replication initiation protein, expressed	chr1	36950074	36955692	+	CDS,five_prime_UTR
3	LOC_Os09g21110	leucyl-tRNA synthetase, cytoplasmic, putative, expressed	gene	leucyl-tRNA synthetase, cytoplasmic, putative, expressed	chr9	12729526	12734641	-	CDS,three_prime_UTR
3	LOC_Os01g70550	heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed	gene	heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed	chr1	40857384	40860878	-	CDS
3	LOC_Os04g24300	OsWAK35a - OsWAK short gene, expressed	gene	OsWAK35a - OsWAK short gene, expressed	chr4	13910617	13915832	+	five_prime_UTR,CDS,promoter
3	LOC_Os09g13630	ZOS9-03 - C2H2 zinc finger protein, expressed	gene	ZOS9-03 - C2H2 zinc finger protein, expressed	chr9	7924560	7937161	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g63490	pantoate--beta-alanine ligase, putative, expressed	gene	pantoate--beta-alanine ligase, putative, expressed	chr3	35858053	35860657	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g32060	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr4	19055306	19059918	+	CDS,five_prime_UTR
3	LOC_Os01g06900	verticillium wilt disease resistance protein Ve2, putative, expressed	gene	verticillium wilt disease resistance protein Ve2, putative, expressed	chr1	3271839	3275416	+	CDS
3	LOC_Os01g05810	gamma-glutamyltranspeptidase 1 precursor, putative, expressed	gene	gamma-glutamyltranspeptidase 1 precursor, putative, expressed	chr1	2775973	2780775	+	CDS
3	LOC_Os01g60650	non-green plastid inner envelope membrane protein, putative, expressed	gene	non-green plastid inner envelope membrane protein, putative, expressed	chr1	35062626	35067164	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g15860	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr3	8748737	8751846	+	CDS,three_prime_UTR
3	LOC_Os11g11500	serpin domain containing protein, putative, expressed	gene	serpin domain containing protein, putative, expressed	chr11	6388536	6390505	-	CDS,three_prime_UTR
3	LOC_Os02g06290	rhodanese-like domain containing protein, putative, expressed	gene	rhodanese-like domain containing protein, putative, expressed	chr2	3141990	3144658	+	three_prime_UTR,downstream
3	LOC_Os09g32820	uridine/cytidine kinase-like 1, putative, expressed	gene	uridine/cytidine kinase-like 1, putative, expressed	chr9	19569590	19575204	+	CDS,promoter
3	LOC_Os03g60880	nucleobase-ascorbate transporter, putative, expressed	gene	nucleobase-ascorbate transporter, putative, expressed	chr3	34590224	34594082	-	CDS,downstream
3	LOC_Os07g44310	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr7	26470582	26472126	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g58550	chloroplast channel forming outer membrane protein, putative, expressed	gene	chloroplast channel forming outer membrane protein, putative, expressed	chr2	35778973	35781951	-	three_prime_UTR,promoter
3	LOC_Os01g61430	HIT zinc finger domain containing protein, expressed	gene	HIT zinc finger domain containing protein, expressed	chr1	35517504	35522539	-	CDS,three_prime_UTR,downstream
3	LOC_Os07g37580	diacylglycerol kinase, putative, expressed	gene	diacylglycerol kinase, putative, expressed	chr7	22512100	22517763	+	CDS,three_prime_UTR
3	LOC_Os07g48810	parvulin-type peptidyl prolyl cis/trans isomerase, putative, expressed	gene	parvulin-type peptidyl prolyl cis/trans isomerase, putative, expressed	chr7	29208564	29211786	+	CDS,three_prime_UTR
3	LOC_Os02g05620	ATEXO70G1, putative, expressed	gene	ATEXO70G1, putative, expressed	chr2	2735884	2738355	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g41970	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr10	22497376	22501960	+	CDS,three_prime_UTR
3	LOC_Os01g73060	expressed protein	gene	expressed protein	chr1	42387230	42389018	-	three_prime_UTR,promoter
3	LOC_Os03g22580	CW-type Zinc Finger, putative, expressed	gene	CW-type Zinc Finger, putative, expressed	chr3	12987473	12997384	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g08840	phosphate/phosphate translocator, putative, expressed	gene	phosphate/phosphate translocator, putative, expressed	chr8	5138640	5142712	+	CDS
3	LOC_Os10g39820	zinc knuckle domain containing protein, expressed	gene	zinc knuckle domain containing protein, expressed	chr10	21240057	21243909	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os08g09250	glyoxalase family protein, putative, expressed	gene	glyoxalase family protein, putative, expressed	chr8	5372219	5376155	-	three_prime_UTR,CDS,promoter
3	LOC_Os03g54790	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr3	31142680	31148168	+	CDS,promoter
3	LOC_Os11g42350	glutathione synthetase, chloroplast precursor, putative, expressed	gene	glutathione synthetase, chloroplast precursor, putative, expressed	chr11	25026031	25030713	+	CDS
3	LOC_Os09g30439	heat shock protein, putative	gene	heat shock protein, putative	chr9	18534745	18540108	-	CDS
3	LOC_Os03g14690	vacuolar ATP synthase 98 kDa subunit, putative, expressed	gene	vacuolar ATP synthase 98 kDa subunit, putative, expressed	chr3	7981334	7988375	+	CDS
3	LOC_Os02g13270	Mpv17 / PMP22 family domain containing protein, expressed	gene	Mpv17 / PMP22 family domain containing protein, expressed	chr2	7066390	7069494	-	CDS,three_prime_UTR
3	LOC_Os08g30910	YDG/SRA domain containing protein, expressed	gene	YDG/SRA domain containing protein, expressed	chr8	19082792	19086784	+	CDS,downstream
3	LOC_Os07g08500	C-5 cytosine-specific DNA methylase, putative, expressed	gene	C-5 cytosine-specific DNA methylase, putative, expressed	chr7	4388628	4390925	+	CDS
3	LOC_Os09g08430	ribosomal protein L22, putative, expressed	gene	ribosomal protein L22, putative, expressed	chr9	4389880	4392872	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g60660	methionyl-tRNA synthetase, putative, expressed	gene	methionyl-tRNA synthetase, putative, expressed	chr1	35068203	35073448	-	three_prime_UTR,CDS,promoter
3	LOC_Os03g49464	tetratricopeptide-like helical, putative, expressed	gene	tetratricopeptide-like helical, putative, expressed	chr3	28144984	28152235	+	CDS,three_prime_UTR,promoter
3	LOC_Os07g13950	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	7972482	7974779	-	CDS,promoter
3	LOC_Os04g33220	SAM domain family protein, expressed	gene	SAM domain family protein, expressed	chr4	19927068	19931057	-	three_prime_UTR,promoter
3	LOC_Os01g59670	expressed protein	gene	expressed protein	chr1	34513074	34519844	+	CDS,promoter
3	LOC_Os01g03040	expressed protein	gene	expressed protein	chr1	1159152	1163635	-	CDS
3	LOC_Os07g23340	male sterility protein, putative, expressed	gene	male sterility protein, putative, expressed	chr7	13148745	13152346	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g01520	ECT protein, putative, expressed	gene	ECT protein, putative, expressed	chr5	304131	311132	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g39650	phytanoyl-CoA dioxygenase, putative, expressed	gene	phytanoyl-CoA dioxygenase, putative, expressed	chr5	23210779	23218385	-	CDS
3	LOC_Os03g36630	expressed protein	gene	expressed protein	chr3	20311821	20316895	+	CDS
3	LOC_Os02g11940	sterol glucosyltransferase, putative, expressed	gene	sterol glucosyltransferase, putative, expressed	chr2	6188722	6193632	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g06120	expressed protein	gene	expressed protein	chr6	2831463	2835325	+	CDS,promoter
3	LOC_Os02g04020	expressed protein	gene	expressed protein	chr2	1743145	1748216	+	CDS
3	LOC_Os03g49220	adenylosuccinate synthetase, chloroplast precursor, putative, expressed	gene	adenylosuccinate synthetase, chloroplast precursor, putative, expressed	chr3	28028540	28032024	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os11g07120	receptor kinase-like protein, identical, putative, expressed	gene	receptor kinase-like protein, identical, putative, expressed	chr11	3537023	3541551	+	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os11g09940	expressed protein	gene	expressed protein	chr11	5320408	5323412	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g43420	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr7	25997791	26002523	+	CDS,three_prime_UTR
3	LOC_Os01g15448	expressed protein	gene	expressed protein	chr1	8656064	8657466	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g45190	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr1	25635906	25639519	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g03540	expressed protein	gene	expressed protein	chr8	1647516	1648034	+	CDS,downstream
3	LOC_Os01g09760	DIRP family protein, putative, expressed	gene	DIRP family protein, putative, expressed	chr1	5027289	5036189	+	CDS,three_prime_UTR
3	LOC_Os07g46030	expressed protein	gene	expressed protein	chr7	27467811	27471355	+	CDS
3	LOC_Os03g03070	transcription factor, putative, expressed	gene	transcription factor, putative, expressed	chr3	1268854	1270781	-	five_prime_UTR,CDS,downstream
3	LOC_Os08g08060	vacuolar protein sorting-associated protein 18, putative, expressed	gene	vacuolar protein sorting-associated protein 18, putative, expressed	chr8	4570007	4579748	+	CDS
3	LOC_Os01g42530	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr1	24186231	24188960	+	CDS,three_prime_UTR
3	LOC_Os04g31940	dnaJ domain containing protein, expressed	gene	dnaJ domain containing protein, expressed	chr4	18958215	18961095	+	three_prime_UTR,downstream
3	LOC_Os02g58580	cation efflux family protein, putative, expressed	gene	cation efflux family protein, putative, expressed	chr2	35801176	35806577	+	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g66140	plus-3 domain containing protein, putative, expressed	gene	plus-3 domain containing protein, putative, expressed	chr1	38412123	38423578	-	CDS,promoter
3	LOC_Os01g15790	expressed protein	gene	expressed protein	chr1	8891579	8899134	+	CDS,three_prime_UTR
3	LOC_Os12g42040	OsWAK126 - OsWAK receptor-like protein kinase, expressed	gene	OsWAK126 - OsWAK receptor-like protein kinase, expressed	chr12	26039751	26042595	+	CDS,promoter
3	LOC_Os01g71050	MSP domain containing protein, putative, expressed	gene	MSP domain containing protein, putative, expressed	chr1	41115942	41121269	-	CDS,three_prime_UTR
3	LOC_Os06g44380	ubiquitin carboxyl-terminal hydrolase family protein, expressed	gene	ubiquitin carboxyl-terminal hydrolase family protein, expressed	chr6	26784111	26791029	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g38260	60S ribosomal protein L19-3, putative, expressed	gene	60S ribosomal protein L19-3, putative, expressed	chr3	21237111	21239372	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g16540	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr11	9151168	9167917	-	CDS,three_prime_UTR
3	LOC_Os08g42590	mtN19, putative, expressed	gene	mtN19, putative, expressed	chr8	26915480	26918861	+	five_prime_UTR,CDS
3	LOC_Os07g48920	aldehyde dehydrogenase, putative, expressed	gene	aldehyde dehydrogenase, putative, expressed	chr7	29270528	29276753	-	CDS
3	LOC_Os06g44230	DNA-directed RNA polymerase 3A, chloroplast precursor, putative, expressed	gene	DNA-directed RNA polymerase 3A, chloroplast precursor, putative, expressed	chr6	26679143	26689059	+	CDS,three_prime_UTR
3	LOC_Os02g11060	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr2	5924720	5930096	+	CDS
3	LOC_Os05g23950	TRAF-type zinc finger family protein, expressed	gene	TRAF-type zinc finger family protein, expressed	chr5	13725763	13728004	+	CDS,promoter
3	LOC_Os04g54640	peptidase, cysteine peptidase active site, putative, expressed	gene	peptidase, cysteine peptidase active site, putative, expressed	chr4	32297905	32300446	-	CDS
3	LOC_Os03g22830	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr3	13197709	13200028	-	three_prime_UTR,promoter
3	LOC_Os01g15840	PPR repeat containing protein	gene	PPR repeat containing protein	chr1	8920590	8924372	-	CDS,promoter
3	LOC_Os01g65550	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr1	38046995	38053314	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g71980	rho-GTPase-activating protein-like, putative, expressed	gene	rho-GTPase-activating protein-like, putative, expressed	chr1	41714966	41717975	+	three_prime_UTR,CDS,downstream
3	LOC_Os05g37120	sec23/Sec24 zinc finger family protein, expressed	gene	sec23/Sec24 zinc finger family protein, expressed	chr5	21629929	21635266	-	CDS,three_prime_UTR
3	LOC_Os04g27096	hypothetical protein	gene	hypothetical protein	chr4	15872671	15874053	-	CDS,promoter
3	LOC_Os04g51080	scramblase, putative, expressed	gene	scramblase, putative, expressed	chr4	30056462	30061725	+	CDS,three_prime_UTR
3	LOC_Os05g43240	jacalin-like lectin domain containing protein, expressed	gene	jacalin-like lectin domain containing protein, expressed	chr5	25096407	25100868	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g04750	OsDegp14 - Putative Deg protease homologue, expressed	gene	OsDegp14 - Putative Deg protease homologue, expressed	chr12	2016472	2021886	-	CDS
3	LOC_Os05g15890	SNF2 family N-terminal domain containing protein, expressed	gene	SNF2 family N-terminal domain containing protein, expressed	chr5	8966050	8973237	-	CDS,three_prime_UTR
3	LOC_Os09g30400	OsWRKY80 - Superfamily of TFs having WRKY and zinc finger domains, expressed	gene	OsWRKY80 - Superfamily of TFs having WRKY and zinc finger domains, expressed	chr9	18495948	18500263	-	CDS,promoter
3	LOC_Os08g31780	MLA1, putative, expressed	gene	MLA1, putative, expressed	chr8	19699066	19702526	-	CDS
3	LOC_Os09g23150	monoglyceride lipase, putative, expressed	gene	monoglyceride lipase, putative, expressed	chr9	13694146	13698845	-	CDS
3	LOC_Os06g10440	gb protein, putative, expressed	gene	gb protein, putative, expressed	chr6	5368570	5371877	+	CDS,three_prime_UTR
3	LOC_Os03g17990	Yip1 domain containing protein, expressed	gene	Yip1 domain containing protein, expressed	chr3	10015404	10018675	+	three_prime_UTR,CDS
3	LOC_Os05g32220	L1P family of ribosomal proteins domain containing protein, expressed	gene	L1P family of ribosomal proteins domain containing protein, expressed	chr5	18727119	18731257	+	CDS,three_prime_UTR
3	LOC_Os03g12470	OsWAK25 - OsWAK receptor-like protein kinase, expressed	gene	OsWAK25 - OsWAK receptor-like protein kinase, expressed	chr3	6588671	6593037	+	CDS
3	LOC_Os06g29430	cytidine and deoxycytidylate deaminase zinc-binding region family protein, expressed	gene	cytidine and deoxycytidylate deaminase zinc-binding region family protein, expressed	chr6	16851006	16857875	+	CDS
3	LOC_Os01g67370	expressed protein	gene	expressed protein	chr1	39128693	39133815	-	CDS,three_prime_UTR
3	LOC_Os05g06530	expressed protein	gene	expressed protein	chr5	3361161	3364553	+	three_prime_UTR,downstream
3	LOC_Os02g12400	receptor-like protein kinase precursor, putative, expressed	gene	receptor-like protein kinase precursor, putative, expressed	chr2	6468567	6472845	+	CDS
3	LOC_Os12g41800	VTC2, putative, expressed	gene	VTC2, putative, expressed	chr12	25855260	25859386	-	CDS,three_prime_UTR,downstream
3	LOC_Os11g04510	expressed protein	gene	expressed protein	chr11	1886132	1891678	+	CDS,three_prime_UTR,promoter
3	LOC_Os06g02144	6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed	gene	6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed	chr6	642684	645769	+	CDS,three_prime_UTR
3	LOC_Os08g41010	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr8	25934372	25939731	+	CDS,three_prime_UTR
3	LOC_Os06g49120	Complex I intermediate-associated protein 30 domain containing protein, putative, expressed	gene	Complex I intermediate-associated protein 30 domain containing protein, putative, expressed	chr6	29761521	29765747	-	CDS,three_prime_UTR
3	LOC_Os01g32090	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr1	17558652	17566759	-	CDS,three_prime_UTR
3	LOC_Os01g59980	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr1	34676948	34681187	+	CDS
3	LOC_Os06g42490	expressed protein	gene	expressed protein	chr6	25542347	25545483	+	CDS,three_prime_UTR
3	LOC_Os08g16600	WD-40 repeat protein family, putative, expressed	gene	WD-40 repeat protein family, putative, expressed	chr8	10151075	10155815	+	CDS
3	LOC_Os03g36110	expressed protein	gene	expressed protein	chr3	20028783	20032222	-	CDS,three_prime_UTR
3	LOC_Os08g13990	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr8	8388390	8392589	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g39980	DNA-binding bromodomain-containing protein, putative, expressed	gene	DNA-binding bromodomain-containing protein, putative, expressed	chr8	25323280	25326646	-	three_prime_UTR,promoter
3	LOC_Os01g41040	SCF apoptosis response protein, putative, expressed	gene	SCF apoptosis response protein, putative, expressed	chr1	23238769	23242950	+	CDS,three_prime_UTR
3	LOC_Os01g47460	expressed protein	gene	expressed protein	chr1	27122442	27128357	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g13890	FYVE zinc finger domain containing protein, expressed	gene	FYVE zinc finger domain containing protein, expressed	chr2	7542594	7547071	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g49930	expressed protein	gene	expressed protein	chr1	28674463	28679111	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g47380	expressed protein	gene	expressed protein	chr7	28336742	28338280	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g28040	OsPOP18 - Putative Prolyl Oligopeptidase homologue, expressed	gene	OsPOP18 - Putative Prolyl Oligopeptidase homologue, expressed	chr9	17014449	17018852	-	CDS,three_prime_UTR
3	LOC_Os07g46330	uncharacterized UPF0114 domain containing protein, expressed	gene	uncharacterized UPF0114 domain containing protein, expressed	chr7	27629652	27632390	+	CDS
3	LOC_Os12g36930	expressed protein	gene	expressed protein	chr12	22607829	22609526	+	three_prime_UTR,promoter,downstream
3	LOC_Os12g13660	expressed protein	gene	expressed protein	chr12	7676111	7683511	-	CDS,three_prime_UTR
3	LOC_Os05g36270	fructose-1,6-bisphosphatase, putative, expressed	gene	fructose-1,6-bisphosphatase, putative, expressed	chr5	21431280	21434279	-	CDS,three_prime_UTR
3	LOC_Os09g37860	NOL1/NOP2/sun family protein, putative, expressed	gene	NOL1/NOP2/sun family protein, putative, expressed	chr9	21827697	21833015	+	CDS,three_prime_UTR
3	LOC_Os06g08510	expressed protein	gene	expressed protein	chr6	4200214	4201868	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g40570	WRKY DNA-binding domain containing protein, expressed	gene	WRKY DNA-binding domain containing protein, expressed	chr7	24310904	24314389	-	CDS,three_prime_UTR
3	LOC_Os12g37880	expressed protein	gene	expressed protein	chr12	23246399	23249315	+	CDS,three_prime_UTR,promoter
3	LOC_Os04g36850	ORG4, putative, expressed	gene	ORG4, putative, expressed	chr4	22058734	22061264	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g49900	peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed	gene	peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed	chr1	28656558	28659454	-	CDS,three_prime_UTR
3	LOC_Os06g09320	expressed protein	gene	expressed protein	chr6	4685958	4689305	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g02214	Citrate transporter protein, putative, expressed	gene	Citrate transporter protein, putative, expressed	chr9	877145	889186	+	CDS,three_prime_UTR
3	LOC_Os08g05940	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr8	3223229	3227228	-	CDS
3	LOC_Os03g62230	ZOS3-24 - C2H2 zinc finger protein, expressed	gene	ZOS3-24 - C2H2 zinc finger protein, expressed	chr3	35244151	35245475	+	three_prime_UTR,downstream
3	LOC_Os01g10030	expressed protein	gene	expressed protein	chr1	5226044	5228966	+	five_prime_UTR,promoter
3	LOC_Os02g20950	expressed protein	gene	expressed protein	chr2	12387033	12394239	+	CDS
3	LOC_Os07g30250	RFT1, putative, expressed	gene	RFT1, putative, expressed	chr7	17880014	17886828	-	CDS,three_prime_UTR
3	LOC_Os09g03630	ankyrin, putative, expressed	gene	ankyrin, putative, expressed	chr9	1813010	1821556	-	CDS
3	LOC_Os03g57580	expressed protein	gene	expressed protein	chr3	32822001	32825376	-	CDS,three_prime_UTR
3	LOC_Os08g12760	YT521-B, putative, expressed	gene	YT521-B, putative, expressed	chr8	7558103	7562193	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g51380	expressed protein	gene	expressed protein	chr5	29396937	29402199	+	three_prime_UTR
3	LOC_Os01g44170	conserved hypothetical protein	gene	conserved hypothetical protein	chr1	25316071	25322456	+	CDS
3	LOC_Os03g48320	disease resistance RPP13-like protein 1, putative, expressed	gene	disease resistance RPP13-like protein 1, putative, expressed	chr3	27510669	27514545	-	CDS
3	LOC_Os01g13200	abscisic acid insensitive 8, putative, expressed	gene	abscisic acid insensitive 8, putative, expressed	chr1	7351175	7356620	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g42110	expressed protein	gene	expressed protein	chr8	26603977	26606824	+	CDS
3	LOC_Os08g12780	chloroplast envelope membrane protein, putative, expressed	gene	chloroplast envelope membrane protein, putative, expressed	chr8	7567537	7573300	-	three_prime_UTR,CDS
3	LOC_Os05g05330	expressed protein	gene	expressed protein	chr5	2625947	2630217	-	CDS
3	LOC_Os05g11140	CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed	gene	CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed	chr5	6272625	6282505	-	CDS,three_prime_UTR
3	LOC_Os02g07840	bZIP transcription factor domain containing protein, expressed	gene	bZIP transcription factor domain containing protein, expressed	chr2	4109767	4112881	+	CDS
3	LOC_Os08g45140	OsGrx_S12 - glutaredoxin subgroup I, expressed	gene	OsGrx_S12 - glutaredoxin subgroup I, expressed	chr8	28340583	28342829	+	CDS,three_prime_UTR
3	LOC_Os06g51420	coiled-coil domain-containing protein 12, putative, expressed	gene	coiled-coil domain-containing protein 12, putative, expressed	chr6	31146903	31149547	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g10720	glutathione S-transferase, putative, expressed	gene	glutathione S-transferase, putative, expressed	chr12	5755418	5759070	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g07905	galactosyltransferase family protein, putative, expressed	gene	galactosyltransferase family protein, putative, expressed	chr6	3839733	3843897	+	CDS,three_prime_UTR
3	LOC_Os05g19630	peptide chain release factor protein, putative, expressed	gene	peptide chain release factor protein, putative, expressed	chr5	11436227	11440459	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g35740	12-oxophytodienoate reductase, putative, expressed	gene	12-oxophytodienoate reductase, putative, expressed	chr8	22544471	22548027	+	CDS,three_prime_UTR
3	LOC_Os09g30070	expressed protein	gene	expressed protein	chr9	18280422	18287451	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g55930	ribosomal protein, putative, expressed	gene	ribosomal protein, putative, expressed	chr3	31838241	31840115	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g01180	OsWRKY57v2 - Superfamily of TFs having WRKY and zinc finger domains, expressed	gene	OsWRKY57v2 - Superfamily of TFs having WRKY and zinc finger domains, expressed	chr12	99799	103008	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g05180	expressed protein	gene	expressed protein	chr1	2433793	2437774	+	CDS,three_prime_UTR
3	LOC_Os11g24500	expressed protein	gene	expressed protein	chr11	13505775	13507727	-	three_prime_UTR,downstream
3	LOC_Os05g30920	OsFBX167 - F-box domain containing protein, expressed	gene	OsFBX167 - F-box domain containing protein, expressed	chr5	17890785	17893741	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g56300	aminotransferase, classes I and II, domain containing protein, expressed	gene	aminotransferase, classes I and II, domain containing protein, expressed	chr2	34457161	34461266	+	CDS,three_prime_UTR
3	LOC_Os08g31814	OsAPRL4  adenosine 5'-phosphosulfate reductase-like OsAPRL4, expressed	gene	OsAPRL4  adenosine 5'-phosphosulfate reductase-like OsAPRL4, expressed	chr8	19727719	19730562	+	CDS,three_prime_UTR
3	LOC_Os09g29060	expressed protein	gene	expressed protein	chr9	17644486	17647923	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g15790	eukaryotic aspartyl protease domain containing protein, expressed	gene	eukaryotic aspartyl protease domain containing protein, expressed	chr4	8574250	8581052	+	CDS,three_prime_UTR
3	LOC_Os12g31790	expressed protein	gene	expressed protein	chr12	19097567	19101148	-	CDS,promoter
3	LOC_Os05g04160	pentatricopeptide containing protein, putative	gene	pentatricopeptide containing protein, putative	chr5	1864564	1866477	+	CDS,promoter,downstream
3	LOC_Os10g03690	OsFBX346 - F-box domain containing protein, expressed	gene	OsFBX346 - F-box domain containing protein, expressed	chr10	1655581	1658669	-	CDS,three_prime_UTR
3	LOC_Os01g24880	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr1	14011489	14018439	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g67310	patatin, putative, expressed	gene	patatin, putative, expressed	chr1	39065132	39067608	+	CDS,three_prime_UTR,five_prime_UTR,promoter
3	LOC_Os07g19040	glycosyl hydrolase, putative	gene	glycosyl hydrolase, putative	chr7	11273000	11273893	-	CDS,promoter
3	LOC_Os03g48490	centromere protein, putative, expressed	gene	centromere protein, putative, expressed	chr3	27645293	27652788	+	CDS
3	LOC_Os08g16780	sin-like protein conserved region containing protein, expressed	gene	sin-like protein conserved region containing protein, expressed	chr8	10256718	10267937	+	three_prime_UTR
3	LOC_Os02g10540	ribosomal protein L7/L12 C-terminal domain containing protein, expressed	gene	ribosomal protein L7/L12 C-terminal domain containing protein, expressed	chr2	5550032	5552116	-	three_prime_UTR
3	LOC_Os12g37590	prefoldin, putative, expressed	gene	prefoldin, putative, expressed	chr12	23046441	23051035	+	CDS
3	LOC_Os05g25450	TKL_IRAK_CrRLK1L-1.3 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed	gene	TKL_IRAK_CrRLK1L-1.3 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed	chr5	14738065	14742185	-	CDS
3	LOC_Os12g04924	ubiquitin-like protein 5, putative, expressed	gene	ubiquitin-like protein 5, putative, expressed	chr12	2117023	2119613	+	three_prime_UTR
3	LOC_Os02g39920	AT hook motif family protein, expressed	gene	AT hook motif family protein, expressed	chr2	24133884	24140836	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g44970	polygalacturonase, putative, expressed	gene	polygalacturonase, putative, expressed	chr1	25512762	25517198	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g05980	40S ribosomal protein S9-2, putative, expressed	gene	40S ribosomal protein S9-2, putative, expressed	chr3	2985013	2988280	+	CDS,three_prime_UTR
3	LOC_Os09g38790	ZOS9-19 - C2H2 zinc finger protein, expressed	gene	ZOS9-19 - C2H2 zinc finger protein, expressed	chr9	22286693	22291265	-	three_prime_UTR,CDS
3	LOC_Os11g25980	phospholipid-transporting ATPase 2, putative, expressed	gene	phospholipid-transporting ATPase 2, putative, expressed	chr11	14359856	14381249	+	CDS,three_prime_UTR
3	LOC_Os12g21870	type II intron maturase protein, putative, expressed	gene	type II intron maturase protein, putative, expressed	chr12	12310045	12315681	-	CDS,promoter
3	LOC_Os05g45420	CAMK_KIN1/SNF1/Nim1_like_AMPKh.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_KIN1/SNF1/Nim1_like_AMPKh.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr5	26284360	26288974	-	CDS,three_prime_UTR
3	LOC_Os03g25970	KH domain-containing protein, putative, expressed	gene	KH domain-containing protein, putative, expressed	chr3	14870674	14875303	-	three_prime_UTR
3	LOC_Os09g38530	transmembrane 9 superfamily member, putative, expressed	gene	transmembrane 9 superfamily member, putative, expressed	chr9	22167965	22171953	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g41962	nucleolar protein NOP5, putative, expressed	gene	nucleolar protein NOP5, putative, expressed	chr12	25988158	25992511	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g37842	expressed protein	gene	expressed protein	chr1	21180386	21183333	+	CDS,three_prime_UTR,promoter
3	LOC_Os07g48229	vacuolar-sorting receptor precursor, putative, expressed	gene	vacuolar-sorting receptor precursor, putative, expressed	chr7	28808544	28818794	-	CDS
3	LOC_Os05g37450	starch binding domain containing protein, putative, expressed	gene	starch binding domain containing protein, putative, expressed	chr5	21852101	21854822	-	CDS,three_prime_UTR
3	LOC_Os03g17300	TKL_IRAK_CrRLK1L-1.7 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed	gene	TKL_IRAK_CrRLK1L-1.7 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed	chr3	9631581	9635695	+	three_prime_UTR,downstream
3	LOC_Os08g32500	nucleobase-ascorbate transporter, putative, expressed	gene	nucleobase-ascorbate transporter, putative, expressed	chr8	20126477	20130954	+	CDS
3	LOC_Os12g22760	expressed protein	gene	expressed protein	chr12	12842529	12849104	+	three_prime_UTR
3	LOC_Os04g55220	C2 domain containing protein, expressed	gene	C2 domain containing protein, expressed	chr4	32641644	32646008	+	CDS,promoter,downstream
3	LOC_Os03g63250	brefeldin A-sensitive Golgi protein-like, putative, expressed	gene	brefeldin A-sensitive Golgi protein-like, putative, expressed	chr3	35728934	35734476	-	CDS,downstream
3	LOC_Os05g05580	conserved hypothetical protein	gene	conserved hypothetical protein	chr5	2767308	2775680	-	CDS,downstream
3	LOC_Os07g02770	OsFBL32 - F-box domain and LRR containing protein, expressed	gene	OsFBL32 - F-box domain and LRR containing protein, expressed	chr7	1010880	1013987	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os09g33920	expressed protein	gene	expressed protein	chr9	20018960	20022942	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g12220	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	6840504	6843825	+	CDS,downstream
3	LOC_Os04g40050	ribonuclease H2 subunit B, putative, expressed	gene	ribonuclease H2 subunit B, putative, expressed	chr4	23658401	23662791	+	three_prime_UTR,CDS
3	LOC_Os11g26890	expressed protein	gene	expressed protein	chr11	14983487	14986467	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g44394	mitotic checkpoint protein, putative, expressed	gene	mitotic checkpoint protein, putative, expressed	chr1	25465319	25473213	+	CDS
3	LOC_Os03g57660	peptidase, putative, expressed	gene	peptidase, putative, expressed	chr3	32851930	32859478	+	five_prime_UTR,CDS
3	LOC_Os01g12260	vacuolar ATP synthase subunit E, putative, expressed	gene	vacuolar ATP synthase subunit E, putative, expressed	chr1	6698462	6702371	-	CDS,three_prime_UTR
3	LOC_Os07g05960	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	2882040	2891648	-	CDS
3	LOC_Os11g43320	NBS-LRR type disease resistance protein, putative, expressed	gene	NBS-LRR type disease resistance protein, putative, expressed	chr11	25668371	25671874	+	CDS,three_prime_UTR
3	LOC_Os01g59750	histidine triad family protein, putative, expressed	gene	histidine triad family protein, putative, expressed	chr1	34559621	34563268	-	CDS,three_prime_UTR,downstream
3	LOC_Os11g30410	ThiF family domain containing protein, putative, expressed	gene	ThiF family domain containing protein, putative, expressed	chr11	17204335	17210650	+	CDS,three_prime_UTR
3	LOC_Os01g01450	stress responsive protein, putative, expressed	gene	stress responsive protein, putative, expressed	chr1	225897	228331	+	CDS,three_prime_UTR
3	LOC_Os11g05070	sodium/calcium exchanger protein, putative, expressed	gene	sodium/calcium exchanger protein, putative, expressed	chr11	2213503	2216606	-	CDS,three_prime_UTR
3	LOC_Os03g51700	expressed protein	gene	expressed protein	chr3	29617249	29620078	+	CDS,three_prime_UTR
3	LOC_Os06g29020	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr6	16537095	16542382	-	CDS,three_prime_UTR
3	LOC_Os01g53710	dual specificity protein phosphatase, putative, expressed	gene	dual specificity protein phosphatase, putative, expressed	chr1	30867363	30870559	+	CDS
3	LOC_Os06g48235	expressed protein	gene	expressed protein	chr6	29174693	29176072	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g62910	expressed protein	gene	expressed protein	chr3	35582619	35590614	+	CDS
3	LOC_Os01g57450	universal stress protein domain containing protein, putative, expressed	gene	universal stress protein domain containing protein, putative, expressed	chr1	33197520	33200689	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g46970	transcription factor, putative, expressed	gene	transcription factor, putative, expressed	chr1	26799016	26804464	-	CDS
3	LOC_Os03g20900	Myb transcription factor, putative, expressed	gene	Myb transcription factor, putative, expressed	chr3	11837678	11839978	+	five_prime_UTR,CDS,promoter
3	LOC_Os04g32880	CBS domain containing membrane protein, putative, expressed	gene	CBS domain containing membrane protein, putative, expressed	chr4	19679007	19687088	-	CDS,three_prime_UTR
3	LOC_Os01g06270	expressed protein	gene	expressed protein	chr1	2970125	2978313	-	CDS
3	LOC_Os10g41150	aminotransferase, classes I and II, domain containing protein, expressed	gene	aminotransferase, classes I and II, domain containing protein, expressed	chr10	22033844	22037608	+	CDS
3	LOC_Os02g49230	CCT/B-box zinc finger protein, putative, expressed	gene	CCT/B-box zinc finger protein, putative, expressed	chr2	30088390	30093805	+	CDS,three_prime_UTR
3	LOC_Os03g08550	STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed	gene	STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed	chr3	4396150	4402098	+	CDS,three_prime_UTR
3	LOC_Os03g44150	aminotransferase, putative, expressed	gene	aminotransferase, putative, expressed	chr3	24808130	24816146	-	CDS
3	LOC_Os07g30940	expressed protein	gene	expressed protein	chr7	18320789	18323700	+	CDS
3	LOC_Os03g54780	STE_PAK_Ste20_KHSh_GCKh_HPKh.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	gene	STE_PAK_Ste20_KHSh_GCKh_HPKh.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	chr3	31132935	31141859	+	CDS,three_prime_UTR,promoter
3	LOC_Os05g01490	ras-related protein, putative	gene	ras-related protein, putative	chr5	287362	290707	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g36480	zinc knuckle domain containing protein, expressed	gene	zinc knuckle domain containing protein, expressed	chr11	21058689	21061052	+	CDS,three_prime_UTR
3	LOC_Os05g48200	glutamate synthase, chloroplast precursor, putative, expressed	gene	glutamate synthase, chloroplast precursor, putative, expressed	chr5	27560011	27573808	+	CDS
3	LOC_Os03g62630	ribosomal protein S6, putative, expressed	gene	ribosomal protein S6, putative, expressed	chr3	35437287	35439232	+	three_prime_UTR,downstream
3	LOC_Os04g35200	expressed protein	gene	expressed protein	chr4	21213359	21215645	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g20880	OsWAK3 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK	gene	OsWAK3 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK	chr1	11654112	11658869	+	CDS,downstream
3	LOC_Os01g36790	TKL_IRAK_DUF26-lf.2 - DUF26 kinases have homology to DUF26 containing loci, expressed	gene	TKL_IRAK_DUF26-lf.2 - DUF26 kinases have homology to DUF26 containing loci, expressed	chr1	20463561	20468204	-	CDS
3	LOC_Os02g47360	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr2	28911931	28914888	+	CDS,promoter,downstream
3	LOC_Os08g42268	expressed protein	gene	expressed protein	chr8	26685273	26691393	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g41820	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr11	24682543	24687296	-	CDS
3	LOC_Os06g05520	OsMKK1 - putative MAPKK based on amino acid sequence homology, expressed	gene	OsMKK1 - putative MAPKK based on amino acid sequence homology, expressed	chr6	2497848	2501902	-	CDS
3	LOC_Os12g40490	LIM domain-containing protein, putative, expressed	gene	LIM domain-containing protein, putative, expressed	chr12	25017508	25023161	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g56200	BTBA2 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed	gene	BTBA2 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed	chr1	32366639	32370772	+	CDS,three_prime_UTR
3	LOC_Os07g27480	 ELMO/CED-12 family protein, putative, expressed	gene	 ELMO/CED-12 family protein, putative, expressed	chr7	16012090	16021637	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g01210	uncharacterized Cys-rich domain containing protein, putative, expressed	gene	uncharacterized Cys-rich domain containing protein, putative, expressed	chr3	134224	136675	+	CDS,three_prime_UTR
3	LOC_Os07g07820	expressed protein	gene	expressed protein	chr7	3913922	3920245	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os06g33600	cyclic nucleotide-gated ion channel 1, putative, expressed	gene	cyclic nucleotide-gated ion channel 1, putative, expressed	chr6	19559075	19561850	+	CDS,three_prime_UTR
3	LOC_Os08g36320	decarboxylase, putative, expressed	gene	decarboxylase, putative, expressed	chr8	22875955	22880235	-	CDS
3	LOC_Os02g58230	C2 domain containing protein, putative, expressed	gene	C2 domain containing protein, putative, expressed	chr2	35637135	35642296	-	CDS
3	LOC_Os03g01890	START domain containing protein, expressed	gene	START domain containing protein, expressed	chr3	548821	556907	+	CDS,three_prime_UTR
3	LOC_Os01g33080	fimbrin-like protein 2, putative, expressed	gene	fimbrin-like protein 2, putative, expressed	chr1	18185939	18192328	+	CDS,three_prime_UTR
3	LOC_Os09g30380	AP005392-AK108636 - NBS/LRR genes that are S-rich,divergent TIR, divergent NBS, expressed	gene	AP005392-AK108636 - NBS/LRR genes that are S-rich,divergent TIR, divergent NBS, expressed	chr9	18490725	18494139	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g43800	DIRP family protein, putative, expressed	gene	DIRP family protein, putative, expressed	chr3	24515500	24532678	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g35640	OsAPRL6  adenosine 5'-phosphosulfate reductase-like OsAPRL6, expressed	gene	OsAPRL6  adenosine 5'-phosphosulfate reductase-like OsAPRL6, expressed	chr12	21632781	21635926	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g12490	KH domain containing protein, putative, expressed	gene	KH domain containing protein, putative, expressed	chr7	7119724	7125463	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g21560	no apical meristem protein, putative, expressed	gene	no apical meristem protein, putative, expressed	chr10	10964283	10969416	-	CDS,three_prime_UTR
3	LOC_Os01g48270	AAA-type ATPase family protein, putative, expressed	gene	AAA-type ATPase family protein, putative, expressed	chr1	27658969	27665728	-	CDS,promoter,downstream
3	LOC_Os02g05450	Homeobox domain containing protein, expressed	gene	Homeobox domain containing protein, expressed	chr2	2620367	2626308	+	CDS,promoter
3	LOC_Os06g36990	phospholipid-transporting ATPase 4, putative, expressed	gene	phospholipid-transporting ATPase 4, putative, expressed	chr6	21808431	21814011	+	CDS
3	LOC_Os10g42940	miro, putative, expressed	gene	miro, putative, expressed	chr10	23074966	23077131	+	three_prime_UTR,downstream
3	LOC_Os05g35110	OsFBL22 - F-box domain and LRR containing protein, expressed	gene	OsFBL22 - F-box domain and LRR containing protein, expressed	chr5	20784613	20788538	+	CDS
3	LOC_Os02g54770	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr2	33535992	33540669	-	CDS,three_prime_UTR
3	LOC_Os02g30114	expressed protein	gene	expressed protein	chr2	17881977	17883954	-	three_prime_UTR,promoter
3	LOC_Os06g50510	START domain containing protein	gene	START domain containing protein	chr6	30573839	30582597	+	CDS,downstream
3	LOC_Os01g16880	expressed protein	gene	expressed protein	chr1	9643469	9652468	-	CDS,downstream
3	LOC_Os02g48290	thioredoxin reductase 2, putative, expressed	gene	thioredoxin reductase 2, putative, expressed	chr2	29545079	29548380	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g48180	bZIP transcription factor domain containing protein, expressed	gene	bZIP transcription factor domain containing protein, expressed	chr7	28778893	28782945	-	CDS,promoter
3	LOC_Os02g56030	expressed protein	gene	expressed protein	chr2	34293595	34295235	+	three_prime_UTR,promoter,downstream
3	LOC_Os04g32150	amidohydrolase family protein, expressed	gene	amidohydrolase family protein, expressed	chr4	19111337	19114922	+	CDS
3	LOC_Os09g25380	kinesin motor protein-related, putative, expressed	gene	kinesin motor protein-related, putative, expressed	chr9	15207404	15214466	-	CDS
3	LOC_Os08g24760	ATP-dependent RNA helicase, putative, expressed	gene	ATP-dependent RNA helicase, putative, expressed	chr8	14978687	14989614	-	CDS,three_prime_UTR
3	LOC_Os01g42460	BAH domain containing protein, expressed	gene	BAH domain containing protein, expressed	chr1	24135827	24143294	+	CDS,three_prime_UTR
3	LOC_Os07g38490	GDP-fucose protein-O-fucosyltransferase 2, putative, expressed	gene	GDP-fucose protein-O-fucosyltransferase 2, putative, expressed	chr7	23114853	23118827	+	CDS
3	LOC_Os01g60440	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr1	34948063	34958312	-	CDS
3	LOC_Os10g34180	transcription factor BTF3, putative, expressed	gene	transcription factor BTF3, putative, expressed	chr10	18169015	18171998	-	CDS,three_prime_UTR,downstream
3	LOC_Os07g27310	CRAL/TRIO domain containing protein, expressed	gene	CRAL/TRIO domain containing protein, expressed	chr7	15874842	15879863	-	five_prime_UTR,CDS
3	LOC_Os02g04330	5-AMP-activated protein kinase beta-1 subunit-related, putative, expressed	gene	5-AMP-activated protein kinase beta-1 subunit-related, putative, expressed	chr2	1908973	1912809	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g14610	IAA-amino acid hydrolase ILR1-like 6 precursor, putative, expressed	gene	IAA-amino acid hydrolase ILR1-like 6 precursor, putative, expressed	chr7	8333374	8334727	-	five_prime_UTR,CDS,downstream
3	LOC_Os01g14830	ribosomal protein L3, putative, expressed	gene	ribosomal protein L3, putative, expressed	chr1	8290337	8295221	+	CDS,three_prime_UTR,promoter
3	LOC_Os06g41750	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr6	25023629	25033554	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g36690	expressed protein	gene	expressed protein	chr9	21161762	21163138	+	CDS,three_prime_UTR
3	LOC_Os07g08810	expressed protein	gene	expressed protein	chr7	4543913	4551954	+	CDS
3	LOC_Os09g36920	la domain containing protein, putative, expressed	gene	la domain containing protein, putative, expressed	chr9	21299440	21303828	-	CDS,three_prime_UTR
3	LOC_Os05g06310	60S ribosomal protein L18-3, putative, expressed	gene	60S ribosomal protein L18-3, putative, expressed	chr5	3230276	3232897	+	three_prime_UTR,downstream
3	LOC_Os03g01830	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr3	504920	508292	+	CDS
3	LOC_Os02g57390	pumilio-family RNA binding protein, putative, expressed	gene	pumilio-family RNA binding protein, putative, expressed	chr2	35156719	35162500	+	CDS,promoter
3	LOC_Os11g36430	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr11	21014047	21019014	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g18050	RNA-binding motif protein, putative, expressed	gene	RNA-binding motif protein, putative, expressed	chr7	10677648	10682117	-	CDS,three_prime_UTR
3	LOC_Os05g02010	expressed protein	gene	expressed protein	chr5	574774	576881	+	three_prime_UTR,downstream
3	LOC_Os02g10790	expressed protein	gene	expressed protein	chr2	5709842	5724705	-	CDS,promoter
3	LOC_Os09g25050	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr9	14970347	14974385	+	three_prime_UTR
3	LOC_Os08g33076	myrosinase precursor, putative, expressed	gene	myrosinase precursor, putative, expressed	chr8	20550393	20555180	+	CDS,three_prime_UTR
3	LOC_Os01g08190	transcriptional corepressor LEUNIG, putative, expressed	gene	transcriptional corepressor LEUNIG, putative, expressed	chr1	3974902	3983922	+	CDS,three_prime_UTR
3	LOC_Os11g29520	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr11	16660482	16666068	-	CDS,downstream
3	LOC_Os03g55270	TIP41, putative, expressed	gene	TIP41, putative, expressed	chr3	31447866	31451783	-	CDS
3	LOC_Os12g40390	expressed protein	gene	expressed protein	chr12	24970908	24973526	-	CDS
3	LOC_Os03g43114	expressed protein	gene	expressed protein	chr3	24047345	24051958	-	three_prime_UTR,promoter,downstream
3	LOC_Os04g34440	ubiquitin interaction motif-containing protein, putative, expressed	gene	ubiquitin interaction motif-containing protein, putative, expressed	chr4	20680199	20686514	-	CDS,three_prime_UTR
3	LOC_Os10g34430	Dicer, putative, expressed	gene	Dicer, putative, expressed	chr10	18289041	18301148	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os10g36870	src homology-3 domain protein 3, putative, expressed	gene	src homology-3 domain protein 3, putative, expressed	chr10	19679980	19683665	-	CDS,downstream
3	LOC_Os02g10320	3-oxoacyl-synthase, putative, expressed	gene	3-oxoacyl-synthase, putative, expressed	chr2	5422121	5424926	-	CDS,promoter
3	LOC_Os05g18950	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr5	11000357	11002088	+	CDS,three_prime_UTR
3	LOC_Os12g33100	guanylate kinase, putative, expressed	gene	guanylate kinase, putative, expressed	chr12	20000190	20004313	-	CDS
3	LOC_Os01g25990	expressed protein	gene	expressed protein	chr1	14729116	14737398	-	five_prime_UTR,CDS
3	LOC_Os02g04170	L-aspartate oxidase 1, putative, expressed	gene	L-aspartate oxidase 1, putative, expressed	chr2	1821855	1826394	+	CDS,downstream
3	LOC_Os02g57340	tetratricopeptide-like helical, putative, expressed	gene	tetratricopeptide-like helical, putative, expressed	chr2	35116970	35120947	+	three_prime_UTR,promoter,downstream
3	LOC_Os12g16280	expressed protein	gene	expressed protein	chr12	9296880	9308454	-	three_prime_UTR
3	LOC_Os01g04814	vacuolar protein sorting-associating protein 4B, putative, expressed	gene	vacuolar protein sorting-associating protein 4B, putative, expressed	chr1	2214586	2221837	-	CDS,three_prime_UTR
3	LOC_Os01g59790	ADP-ribosylation factor, putative, expressed	gene	ADP-ribosylation factor, putative, expressed	chr1	34579298	34583280	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g40090	zinc finger, ZZ type family protein, expressed	gene	zinc finger, ZZ type family protein, expressed	chr4	23682315	23687167	-	CDS,promoter
3	LOC_Os05g30340	expressed protein	gene	expressed protein	chr5	17520902	17527850	+	CDS
3	LOC_Os07g31450	CHR4/MI-2-LIKE, putative, expressed	gene	CHR4/MI-2-LIKE, putative, expressed	chr7	18624792	18637686	-	CDS,promoter
3	LOC_Os12g42310	serine/threonine-protein phosphatase BSL2, putative, expressed	gene	serine/threonine-protein phosphatase BSL2, putative, expressed	chr12	26273157	26282197	-	CDS,three_prime_UTR
3	LOC_Os04g35305	tetratricopeptide-like helical, putative	gene	tetratricopeptide-like helical, putative	chr4	21297031	21298998	-	CDS
3	LOC_Os04g53450	expressed protein	gene	expressed protein	chr4	31638980	31643819	+	CDS,three_prime_UTR,promoter
3	LOC_Os08g14460	expressed protein	gene	expressed protein	chr8	8679812	8685516	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g19400	GRAM and C2 domains containing protein, putative, expressed	gene	GRAM and C2 domains containing protein, putative, expressed	chr6	11045381	11053424	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g38440	XH domain containing protein, expressed	gene	XH domain containing protein, expressed	chr12	23562565	23566687	+	CDS
3	LOC_Os03g63530	histone-like transcription factor and archaeal histone, putative, expressed	gene	histone-like transcription factor and archaeal histone, putative, expressed	chr3	35883071	35887050	+	CDS,three_prime_UTR
3	LOC_Os09g15800	tetratricopeptide-like helical, putative	gene	tetratricopeptide-like helical, putative	chr9	9646716	9649346	-	CDS,promoter
3	LOC_Os10g04580	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr10	2177585	2182188	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os03g09090	expressed protein	gene	expressed protein	chr3	4719647	4723101	-	CDS,promoter
3	LOC_Os03g61640	ZOS3-23 - C2H2 zinc finger protein, expressed	gene	ZOS3-23 - C2H2 zinc finger protein, expressed	chr3	34934472	34937525	+	CDS,three_prime_UTR
3	LOC_Os03g14510	immature colon carcinoma transcript 1 protein precursor, putative, expressed	gene	immature colon carcinoma transcript 1 protein precursor, putative, expressed	chr3	7873475	7877368	+	CDS,three_prime_UTR
3	LOC_Os03g49730	zinc finger protein, putative, expressed	gene	zinc finger protein, putative, expressed	chr3	28301394	28305323	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g55360	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr3	31488806	31493491	+	three_prime_UTR
3	LOC_Os12g02440	WRKY DNA-binding domain containing protein, expressed	gene	WRKY DNA-binding domain containing protein, expressed	chr12	816003	822003	-	five_prime_UTR,CDS
3	LOC_Os02g07450	core histone H2A/H2B/H3/H4, putative, expressed	gene	core histone H2A/H2B/H3/H4, putative, expressed	chr2	3846022	3850128	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g27440	DNA topoisomerase 1, putative, expressed	gene	DNA topoisomerase 1, putative, expressed	chr2	16166830	16174467	+	CDS,three_prime_UTR
3	LOC_Os09g36370	ER lumen protein retaining receptor containing protein, expressed	gene	ER lumen protein retaining receptor containing protein, expressed	chr9	20987969	20993985	+	CDS
3	LOC_Os12g19304	Fe-S metabolism associated domain containing protein, expressed	gene	Fe-S metabolism associated domain containing protein, expressed	chr12	11191182	11202470	-	CDS,three_prime_UTR
3	LOC_Os04g41110	Rad21 / Rec8 like protein, putative, expressed	gene	Rad21 / Rec8 like protein, putative, expressed	chr4	24194654	24201269	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g49770	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr1	28581798	28585482	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g60380	cinnamoyl CoA reductase, putative, expressed	gene	cinnamoyl CoA reductase, putative, expressed	chr3	34333157	34336630	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g45400	antitermination NusB domain-containing protein, putative, expressed	gene	antitermination NusB domain-containing protein, putative, expressed	chr3	25625120	25629182	+	CDS,three_prime_UTR
3	LOC_Os11g07490	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr11	3791883	3797110	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g35410	potassium channel AKT2/3, putative, expressed	gene	potassium channel AKT2/3, putative, expressed	chr5	20976852	20980795	-	CDS
3	LOC_Os04g52040	TNP1, putative, expressed	gene	TNP1, putative, expressed	chr4	30723301	30728581	-	CDS,three_prime_UTR,downstream
3	LOC_Os08g09190	auxin efflux carrier component, putative, expressed	gene	auxin efflux carrier component, putative, expressed	chr8	5321712	5324265	+	three_prime_UTR,downstream
3	LOC_Os12g34350	expressed protein	gene	expressed protein	chr12	20782965	20787320	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g44870	MATE efflux family protein, putative, expressed	gene	MATE efflux family protein, putative, expressed	chr8	28181102	28183152	-	three_prime_UTR,promoter
3	LOC_Os01g69050	lysine ketoglutarate reductase trans-splicing related 1, putative, expressed	gene	lysine ketoglutarate reductase trans-splicing related 1, putative, expressed	chr1	40126372	40131631	+	CDS
3	LOC_Os01g24060	importin subunit alpha, putative, expressed	gene	importin subunit alpha, putative, expressed	chr1	13559806	13565847	+	CDS,three_prime_UTR
3	LOC_Os12g42960	expressed protein	gene	expressed protein	chr12	26653186	26655802	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g41790	DEFL3 - Defensin and Defensin-like DEFL family	gene	DEFL3 - Defensin and Defensin-like DEFL family	chr12	25852605	25853637	+	CDS,promoter,downstream
3	LOC_Os02g08370	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	gene	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	chr2	4454837	4457745	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g04720	leucine-rich repeat protein-related, putative, expressed	gene	leucine-rich repeat protein-related, putative, expressed	chr1	2129798	2136310	+	three_prime_UTR,CDS,downstream
3	LOC_Os02g37834	expressed protein	gene	expressed protein	chr2	22829928	22832976	+	three_prime_UTR,CDS,downstream
3	LOC_Os02g09780	phytoene dehydrogenase-like, putative, expressed	gene	phytoene dehydrogenase-like, putative, expressed	chr2	5045332	5047098	-	CDS
3	LOC_Os03g57854	MBTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed	gene	MBTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed	chr3	32950768	32957496	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g50780	PHD-finger domain containing protein, putative, expressed	gene	PHD-finger domain containing protein, putative, expressed	chr3	28981432	28984914	-	CDS,three_prime_UTR
3	LOC_Os06g06280	galactosyltransferase family protein, putative, expressed	gene	galactosyltransferase family protein, putative, expressed	chr6	2901269	2906307	+	CDS
3	LOC_Os03g10180	expressed protein	gene	expressed protein	chr3	5160512	5165771	+	CDS,three_prime_UTR
3	LOC_Os08g09910	OsFBX276 - F-box domain containing protein	gene	OsFBX276 - F-box domain containing protein	chr8	5719455	5722824	+	CDS,downstream
3	LOC_Os01g09410	expressed protein	gene	expressed protein	chr1	4790837	4794348	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g48010	nuclear matrix constituent protein 1-like, putative, expressed	gene	nuclear matrix constituent protein 1-like, putative, expressed	chr2	29376507	29382690	-	CDS,three_prime_UTR
3	LOC_Os12g08170	2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed	gene	2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed	chr12	4170965	4175895	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g43900	ribosomal protein L35, putative, expressed	gene	ribosomal protein L35, putative, expressed	chr6	26441598	26443901	+	CDS,three_prime_UTR
3	LOC_Os04g56405	expressed protein	gene	expressed protein	chr4	33446573	33449714	-	CDS
3	LOC_Os01g02840	resistance-related receptor-like kinase, putative	gene	resistance-related receptor-like kinase, putative	chr1	996963	999997	+	CDS
3	LOC_Os07g01910	expressed protein	gene	expressed protein	chr7	554994	557373	-	CDS,three_prime_UTR,downstream
3	LOC_Os12g34874	bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed	gene	bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed	chr12	21196625	21201669	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g01440	phosphoribosylformylglycinamidine synthase, putative, expressed	gene	phosphoribosylformylglycinamidine synthase, putative, expressed	chr5	251470	256590	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g02500	superoxide dismutase, chloroplast, putative, expressed	gene	superoxide dismutase, chloroplast, putative, expressed	chr6	863274	865969	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g63220	kinase, pfkB family, putative, expressed	gene	kinase, pfkB family, putative, expressed	chr1	36639900	36646113	+	three_prime_UTR
3	LOC_Os05g07700	ribosomal protein, putative, expressed	gene	ribosomal protein, putative, expressed	chr5	4142099	4144743	+	three_prime_UTR,downstream
3	LOC_Os03g55110	26S proteasome non-ATPase regulatory subunit 10, putative, expressed	gene	26S proteasome non-ATPase regulatory subunit 10, putative, expressed	chr3	31347435	31351092	+	CDS,three_prime_UTR
3	LOC_Os03g05420	MT-A70 domain containing protein, expressed	gene	MT-A70 domain containing protein, expressed	chr3	2675949	2681164	-	CDS,three_prime_UTR,downstream
3	LOC_Os12g16200	glutathione synthetase, chloroplast precursor, putative, expressed	gene	glutathione synthetase, chloroplast precursor, putative, expressed	chr12	9261085	9264390	-	CDS
3	LOC_Os02g57190	Myosin head domain containing protein, expressed	gene	Myosin head domain containing protein, expressed	chr2	35022700	35034601	+	CDS
3	LOC_Os02g35910	protein phosphotase protein, putative, expressed	gene	protein phosphotase protein, putative, expressed	chr2	21563342	21568338	-	CDS,three_prime_UTR
3	LOC_Os01g05620	NBS-LRR disease resistance protein, putative	gene	NBS-LRR disease resistance protein, putative	chr1	2681019	2683988	-	CDS,promoter,downstream
3	LOC_Os04g40720	expressed protein	gene	expressed protein	chr4	23976296	23982789	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g39180	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr9	22504522	22507074	-	CDS,three_prime_UTR
3	LOC_Os06g12500	membrane associated DUF588 domain containing protein, putative, expressed	gene	membrane associated DUF588 domain containing protein, putative, expressed	chr6	6787987	6789051	+	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g36910	NC domain-containing protein, putative, expressed	gene	NC domain-containing protein, putative, expressed	chr5	21494802	21497481	-	CDS,three_prime_UTR,five_prime_UTR,promoter,downstream
3	LOC_Os03g10940	casein kinase II subunit alpha-2, putative, expressed	gene	casein kinase II subunit alpha-2, putative, expressed	chr3	5615047	5619727	-	CDS
3	LOC_Os04g38960	expressed protein	gene	expressed protein	chr4	22959843	22962311	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g20900	hypoxia-responsive family protein, putative, expressed	gene	hypoxia-responsive family protein, putative, expressed	chr9	12579262	12581492	+	three_prime_UTR,downstream
3	LOC_Os03g06950	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	gene	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	chr3	3539147	3549710	-	CDS,promoter
3	LOC_Os02g30624	LSM domain containing protein, expressed	gene	LSM domain containing protein, expressed	chr2	18225256	18229931	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g70170	transaldolase, putative, expressed	gene	transaldolase, putative, expressed	chr1	40609470	40612420	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g31926	expressed protein	gene	expressed protein	chr2	18856264	18857334	+	five_prime_UTR,CDS
3	LOC_Os03g25270	pyrrolidone-carboxylate peptidase, putative, expressed	gene	pyrrolidone-carboxylate peptidase, putative, expressed	chr3	14430318	14434121	+	CDS
3	LOC_Os10g22520	cellulase, putative, expressed	gene	cellulase, putative, expressed	chr10	11595594	11602414	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g46330	Protein kinase domain containing protein, expressed	gene	Protein kinase domain containing protein, expressed	chr6	28089121	28093399	-	five_prime_UTR,CDS
3	LOC_Os11g40410	expressed protein	gene	expressed protein	chr11	23623270	23628083	-	CDS,downstream
3	LOC_Os04g39450	expressed protein	gene	expressed protein	chr4	23314877	23317467	-	three_prime_UTR,CDS
3	LOC_Os02g39990	expressed protein	gene	expressed protein	chr2	24172463	24175424	-	CDS
3	LOC_Os11g02090	expressed protein	gene	expressed protein	chr11	565240	567628	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g32870	OsFBX336 - F-box domain containing protein, expressed	gene	OsFBX336 - F-box domain containing protein, expressed	chr9	19593860	19597258	+	CDS
3	LOC_Os12g38180	heat shock cognate 70 kDa protein 2, putative, expressed	gene	heat shock cognate 70 kDa protein 2, putative, expressed	chr12	23408630	23413654	+	five_prime_UTR
3	LOC_Os10g29650	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr10	15342965	15352331	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os01g56800	MATH domain containing protein, expressed	gene	MATH domain containing protein, expressed	chr1	32772435	32783281	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g52660	expressed protein	gene	expressed protein	chr4	31155078	31159625	+	CDS,three_prime_UTR
3	LOC_Os07g44299	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr7	26467916	26469739	-	CDS,promoter
3	LOC_Os05g01030	phospholipid-transporting ATPase, putative, expressed	gene	phospholipid-transporting ATPase, putative, expressed	chr5	60821	65059	+	CDS,downstream
3	LOC_Os03g06440	RNA helicase SDE3, putative, expressed	gene	RNA helicase SDE3, putative, expressed	chr3	3214474	3219182	-	CDS,three_prime_UTR
3	LOC_Os11g01880	expressed protein	gene	expressed protein	chr11	480060	483730	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g08400	syntaxin, putative, expressed	gene	syntaxin, putative, expressed	chr1	4117041	4121579	+	CDS,three_prime_UTR
3	LOC_Os01g71262	expressed protein	gene	expressed protein	chr1	41235287	41237756	-	CDS,three_prime_UTR
3	LOC_Os12g04595	transcription initiation factor, putative, expressed	gene	transcription initiation factor, putative, expressed	chr12	1941161	1946978	-	CDS,downstream
3	LOC_Os06g10690	PHD-finger domain containing protein, putative, expressed	gene	PHD-finger domain containing protein, putative, expressed	chr6	5574868	5583374	-	CDS,three_prime_UTR
3	LOC_Os10g38050	HOTHEAD precursor, putative, expressed	gene	HOTHEAD precursor, putative, expressed	chr10	20305675	20308715	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g26791	expressed protein	gene	expressed protein	chr3	15293979	15296554	-	three_prime_UTR
3	LOC_Os02g57854	vacuolar ATP synthase subunit F, putative, expressed	gene	vacuolar ATP synthase subunit F, putative, expressed	chr2	35421683	35424771	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os04g41000	expressed protein	gene	expressed protein	chr4	24145654	24149690	-	three_prime_UTR
3	LOC_Os04g56980	SWIB/MDM2 domain containing protein, expressed	gene	SWIB/MDM2 domain containing protein, expressed	chr4	33783501	33787432	+	CDS,three_prime_UTR
3	LOC_Os05g11060	galactosyltransferase family protein, putative, expressed	gene	galactosyltransferase family protein, putative, expressed	chr5	6191083	6196032	-	CDS,three_prime_UTR
3	LOC_Os02g45950	expressed protein	gene	expressed protein	chr2	27989249	27992781	+	CDS
3	LOC_Os09g11440	expressed protein	gene	expressed protein	chr9	6367332	6370361	-	CDS,three_prime_UTR
3	LOC_Os02g13310	homeobox domain containing protein, expressed	gene	homeobox domain containing protein, expressed	chr2	7096950	7100609	+	CDS
3	LOC_Os11g24510	OsSCP56 - Putative Serine Carboxypeptidase homologue, expressed	gene	OsSCP56 - Putative Serine Carboxypeptidase homologue, expressed	chr11	13507966	13515970	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g11820	expressed protein	gene	expressed protein	chr10	6567730	6570724	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g40810	NBS-LRR type disease resistance protein, putative	gene	NBS-LRR type disease resistance protein, putative	chr7	24455136	24458916	-	CDS,promoter,downstream
3	LOC_Os12g36730	stripe rust resistance protein Yr10, putative, expressed	gene	stripe rust resistance protein Yr10, putative, expressed	chr12	22463973	22468936	-	CDS,three_prime_UTR
3	LOC_Os11g47170	receptor-like protein kinase precursor, putative	gene	receptor-like protein kinase precursor, putative	chr11	27850993	27851670	+	CDS,promoter,downstream
3	LOC_Os06g03760	LMBR1 integral membrane protein, putative, expressed	gene	LMBR1 integral membrane protein, putative, expressed	chr6	1484906	1489635	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g04480	CorA-like magnesium transporter protein, putative, expressed	gene	CorA-like magnesium transporter protein, putative, expressed	chr3	2074318	2076632	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g33830	MATH domain containing protein	gene	MATH domain containing protein	chr10	17874054	17885698	-	CDS
3	LOC_Os06g43010	hypothetical protein	gene	hypothetical protein	chr6	25851027	25851320	+	CDS,downstream
3	LOC_Os02g05480	CGMC_MAPKCMGC_2_SLT2y_ERK.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	gene	CGMC_MAPKCMGC_2_SLT2y_ERK.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	chr2	2642975	2646358	-	CDS,three_prime_UTR
3	LOC_Os01g09384	ankyrin repeat domain containing protein, putative, expressed	gene	ankyrin repeat domain containing protein, putative, expressed	chr1	4767735	4781706	-	three_prime_UTR,promoter
3	LOC_Os08g32440	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr8	20084702	20088152	+	CDS,three_prime_UTR
3	LOC_Os03g59640	magnesium-chelatase subunit chlD, chloroplast precursor, putative, expressed	gene	magnesium-chelatase subunit chlD, chloroplast precursor, putative, expressed	chr3	33948068	33954832	+	CDS,three_prime_UTR
3	LOC_Os07g06940	valyl-tRNA synthetase, putative, expressed	gene	valyl-tRNA synthetase, putative, expressed	chr7	3393840	3399180	+	CDS
3	LOC_Os11g45420	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr11	27027212	27030078	+	CDS
3	LOC_Os08g02390	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr8	952685	955166	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g17590	cat eye syndrome critical region protein 5 precursor, putative, expressed	gene	cat eye syndrome critical region protein 5 precursor, putative, expressed	chr3	9782722	9787757	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os08g19320	aberrant root formation protein 4, putative, expressed	gene	aberrant root formation protein 4, putative, expressed	chr8	11557455	11562793	-	CDS,three_prime_UTR
3	LOC_Os05g07650	transmembrane 9 superfamily member, putative, expressed	gene	transmembrane 9 superfamily member, putative, expressed	chr5	4107086	4109857	-	three_prime_UTR,promoter
3	LOC_Os08g29370	peptidyl-prolyl cis-trans isomerase, chloroplast precursor, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, chloroplast precursor, putative, expressed	chr8	18017368	18021285	+	CDS,three_prime_UTR
3	LOC_Os11g04500	cytochrome c-type biogenesis protein dbsD-like, putative, expressed	gene	cytochrome c-type biogenesis protein dbsD-like, putative, expressed	chr11	1882947	1886469	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g02640	hydrolase, NUDIX family, domain containing protein, expressed	gene	hydrolase, NUDIX family, domain containing protein, expressed	chr5	922020	926073	+	CDS,three_prime_UTR
3	LOC_Os11g04210	hydroxymethylglutaryl-CoA lyase, putative, expressed	gene	hydroxymethylglutaryl-CoA lyase, putative, expressed	chr11	1713987	1717849	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g36590	transporter, monovalent cation:proton antiporter-2 family, putative, expressed	gene	transporter, monovalent cation:proton antiporter-2 family, putative, expressed	chr6	21492137	21500377	+	CDS
3	LOC_Os06g11370	mediator of RNA polymerase II transcription subunit 6, putative, expressed	gene	mediator of RNA polymerase II transcription subunit 6, putative, expressed	chr6	5976298	5979830	-	CDS,downstream
3	LOC_Os01g42050	DNL zinc finger domain containing protein, putative	gene	DNL zinc finger domain containing protein, putative	chr1	23839809	23842503	-	CDS,promoter,downstream
3	LOC_Os03g31180	diacylglycerol kinase 1, putative, expressed	gene	diacylglycerol kinase 1, putative, expressed	chr3	17753599	17759915	+	CDS,three_prime_UTR
3	LOC_Os04g42060	cytochrome c oxidase subunit, putative, expressed	gene	cytochrome c oxidase subunit, putative, expressed	chr4	24721427	24724028	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g55130	OsSCP10 - Putative Serine Carboxypeptidase homologue, expressed	gene	OsSCP10 - Putative Serine Carboxypeptidase homologue, expressed	chr2	33763429	33770655	+	three_prime_UTR,CDS
3	LOC_Os01g49190	ATP synthase, putative, expressed	gene	ATP synthase, putative, expressed	chr1	28276655	28280975	+	CDS,downstream
3	LOC_Os10g26610	mandelonitrile lyase, putative, expressed	gene	mandelonitrile lyase, putative, expressed	chr10	13798952	13804176	-	CDS
3	LOC_Os02g53490	cation efflux family protein, putative, expressed	gene	cation efflux family protein, putative, expressed	chr2	32715133	32717919	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g62580	vacuolar sorting protein, putative, expressed	gene	vacuolar sorting protein, putative, expressed	chr3	35417338	35421022	+	CDS,three_prime_UTR
3	LOC_Os06g16030	amidase family protein, putative, expressed	gene	amidase family protein, putative, expressed	chr6	9115945	9123595	+	CDS
3	LOC_Os10g41960	eukaryotic translation initiation factor 3 subunit B, putative, expressed	gene	eukaryotic translation initiation factor 3 subunit B, putative, expressed	chr10	22491833	22496271	-	CDS,promoter
3	LOC_Os04g54800	shikimate kinase, putative, expressed	gene	shikimate kinase, putative, expressed	chr4	32397017	32400615	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g40770	myosin heavy chain-related, putative, expressed	gene	myosin heavy chain-related, putative, expressed	chr7	24428193	24432542	-	CDS
3	LOC_Os03g21690	lung seven transmembrane domain containing protein, putative, expressed	gene	lung seven transmembrane domain containing protein, putative, expressed	chr3	12379116	12384271	-	three_prime_UTR,promoter
3	LOC_Os06g35530	CGMC_GSK.8 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	gene	CGMC_GSK.8 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	chr6	20716743	20723747	+	CDS,three_prime_UTR
3	LOC_Os03g19980	tetratricopeptide-like helical, putative, expressed	gene	tetratricopeptide-like helical, putative, expressed	chr3	11251045	11258247	+	three_prime_UTR
3	LOC_Os08g36994	protein transport protein, putative, expressed	gene	protein transport protein, putative, expressed	chr8	23387964	23400341	+	CDS,three_prime_UTR,promoter
3	LOC_Os12g34840	rhoGAP domain containing protein, expressed	gene	rhoGAP domain containing protein, expressed	chr12	21173481	21176832	+	CDS,downstream
3	LOC_Os11g11340	CIP111, putative, expressed	gene	CIP111, putative, expressed	chr11	6284657	6290913	+	CDS,three_prime_UTR
3	LOC_Os02g43720	enoyl-CoA hydratase/isomerase family protein, putative, expressed	gene	enoyl-CoA hydratase/isomerase family protein, putative, expressed	chr2	26380632	26383681	+	CDS,three_prime_UTR,promoter
3	LOC_Os02g31030	glycerophosphoryl diester phosphodiesterase family protein, putative, expressed	gene	glycerophosphoryl diester phosphodiesterase family protein, putative, expressed	chr2	18531172	18535043	+	CDS,three_prime_UTR
3	LOC_Os01g67750	expressed protein	gene	expressed protein	chr1	39373893	39378525	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g46810	viral A-type inclusion protein repeat containing protein, expressed	gene	viral A-type inclusion protein repeat containing protein, expressed	chr1	26698145	26705114	-	CDS
3	LOC_Os11g13940	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr11	7707751	7712755	-	CDS,promoter
3	LOC_Os11g47450	hypothetical protein	gene	hypothetical protein	chr11	28176303	28179301	+	CDS,downstream
3	LOC_Os12g10700	expressed protein	gene	expressed protein	chr12	5731271	5738702	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g14770	aminotransferase, putative, expressed	gene	aminotransferase, putative, expressed	chr8	8878914	8887145	-	CDS,three_prime_UTR
3	LOC_Os09g35730	OsRhmbd16 - Putative Rhomboid homologue, expressed	gene	OsRhmbd16 - Putative Rhomboid homologue, expressed	chr9	20549324	20552826	-	CDS
3	LOC_Os04g36050	cleft lip and palate transmembrane protein 1, putative, expressed	gene	cleft lip and palate transmembrane protein 1, putative, expressed	chr4	21817567	21823138	-	CDS
3	LOC_Os04g33510	expressed protein	gene	expressed protein	chr4	20104200	20107541	+	CDS,three_prime_UTR
3	LOC_Os08g32850	methylcrotonoyl-CoA carboxylase beta chain, mitochondrial precursor, putative, expressed	gene	methylcrotonoyl-CoA carboxylase beta chain, mitochondrial precursor, putative, expressed	chr8	20356849	20363730	-	CDS
3	LOC_Os04g59550	phosphate/phosphate translocator, putative, expressed	gene	phosphate/phosphate translocator, putative, expressed	chr4	35233800	35236431	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g08320	OsIAA1 - Auxin-responsive Aux/IAA gene family member, expressed	gene	OsIAA1 - Auxin-responsive Aux/IAA gene family member, expressed	chr1	4072676	4075438	-	CDS
3	LOC_Os12g44130	expressed protein	gene	expressed protein	chr12	27340985	27344142	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g04480	expressed protein	gene	expressed protein	chr1	1992515	1995857	+	CDS,downstream
3	LOC_Os11g04850	DTW domain containing protein, putative, expressed	gene	DTW domain containing protein, putative, expressed	chr11	2059758	2062407	-	three_prime_UTR,promoter
3	LOC_Os09g21370	cysteine proteinase EP-B 1 precursor, putative, expressed	gene	cysteine proteinase EP-B 1 precursor, putative, expressed	chr9	12896271	12898549	-	three_prime_UTR,promoter
3	LOC_Os03g06340	XS domain containing protein, expressed	gene	XS domain containing protein, expressed	chr3	3169099	3175433	+	three_prime_UTR,promoter,downstream
3	LOC_Os04g41020	kelch repeat protein, putative, expressed	gene	kelch repeat protein, putative, expressed	chr4	24154470	24158645	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g03850	impaired sucrose induction 1, putative, expressed	gene	impaired sucrose induction 1, putative, expressed	chr6	1546060	1549643	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g35690	ribosomal protein S18 containing protein, expressed	gene	ribosomal protein S18 containing protein, expressed	chr10	19012851	19016222	+	CDS
3	LOC_Os10g37430	expressed protein	gene	expressed protein	chr10	19960092	19965699	+	CDS,three_prime_UTR
3	LOC_Os01g60530	transposon protein, putative, CACTA, En/Spm sub-class	gene	transposon protein, putative, CACTA, En/Spm sub-class	chr1	35002787	35004459	-	CDS,three_prime_UTR
3	LOC_Os01g66970	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr1	38892255	38896671	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g33944	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr2	20221158	20229251	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os01g46610	dehydrogenase, putative, expressed	gene	dehydrogenase, putative, expressed	chr1	26531972	26536147	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g61970	actin, putative, expressed	gene	actin, putative, expressed	chr3	35118388	35122232	-	CDS,three_prime_UTR
3	LOC_Os08g22200	expressed protein	gene	expressed protein	chr8	13390181	13396125	-	CDS
3	LOC_Os12g10810	expressed protein	gene	expressed protein	chr12	5816151	5818136	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g18420	CHCH domain containing protein, expressed	gene	CHCH domain containing protein, expressed	chr3	10323832	10329512	+	CDS,three_prime_UTR
3	LOC_Os06g01670	myb-like DNA-binding domain containing protein, expressed	gene	myb-like DNA-binding domain containing protein, expressed	chr6	397591	402494	-	CDS,three_prime_UTR
3	LOC_Os04g56530	STE_MEKK_ste11_MAP3K.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	gene	STE_MEKK_ste11_MAP3K.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	chr4	33522309	33534118	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g55230	tetratricopeptide repeat domain containing protein, putative, expressed	gene	tetratricopeptide repeat domain containing protein, putative, expressed	chr4	32650055	32663367	+	CDS
3	LOC_Os02g50480	histidine kinase, putative, expressed	gene	histidine kinase, putative, expressed	chr2	30817676	30823639	+	CDS,three_prime_UTR
3	LOC_Os02g34840	RNA polymerase II transcriptional coactivator KIWI, putative, expressed	gene	RNA polymerase II transcriptional coactivator KIWI, putative, expressed	chr2	20878405	20880649	+	three_prime_UTR,downstream
3	LOC_Os12g30590	disease resistance protein RGA2, putative, expressed	gene	disease resistance protein RGA2, putative, expressed	chr12	18341141	18345184	+	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os02g05900	ternary complex factor MIP1, putative, expressed	gene	ternary complex factor MIP1, putative, expressed	chr2	2928920	2932225	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g43570	AGC_AGC_other_NDRh_TRCd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed	gene	AGC_AGC_other_NDRh_TRCd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed	chr5	25269204	25277198	-	CDS
3	LOC_Os03g18700	expressed protein	gene	expressed protein	chr3	10466287	10468799	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g35814	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr6	20895030	20900719	-	CDS
3	LOC_Os03g46950	DNA binding protein, putative, expressed	gene	DNA binding protein, putative, expressed	chr3	26540318	26548293	-	CDS,three_prime_UTR
3	LOC_Os12g42570	expressed protein	gene	expressed protein	chr12	26399720	26404411	-	CDS,three_prime_UTR
3	LOC_Os07g20544	aspartokinase, chloroplast precursor, putative, expressed	gene	aspartokinase, chloroplast precursor, putative, expressed	chr7	11864389	11873248	-	CDS,three_prime_UTR
3	LOC_Os10g32880	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr10	17132649	17138899	-	CDS,promoter
3	LOC_Os04g52450	aminotransferase, putative, expressed	gene	aminotransferase, putative, expressed	chr4	30991539	30997342	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g04920	OsDegp11 - Putative Deg protease homologue, expressed	gene	OsDegp11 - Putative Deg protease homologue, expressed	chr8	2506265	2513527	-	CDS
3	LOC_Os06g01320	chromo domain containing protein, expressed	gene	chromo domain containing protein, expressed	chr6	194018	207583	+	CDS
3	LOC_Os07g44230	ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein, putative, expressed	gene	ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein, putative, expressed	chr7	26431707	26434263	+	CDS,three_prime_UTR
3	LOC_Os11g29900	expressed protein	gene	expressed protein	chr11	16913614	16916801	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g18850	cadmium tolerance factor, putative, expressed	gene	cadmium tolerance factor, putative, expressed	chr6	10708310	10713495	-	CDS
3	LOC_Os04g41150	DUF565 domain containing protein, putative, expressed	gene	DUF565 domain containing protein, putative, expressed	chr4	24217519	24219968	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g55090	alpha-glucan phosphorylast isozyme, putative, expressed	gene	alpha-glucan phosphorylast isozyme, putative, expressed	chr3	31325281	31332048	-	CDS
3	LOC_Os10g33630	adaptin ear-binding coat-associated protein 2, putative, expressed	gene	adaptin ear-binding coat-associated protein 2, putative, expressed	chr10	17655206	17658332	+	CDS,three_prime_UTR
3	LOC_Os01g55580	tesmin/TSO1-like CXC domain containing protein, expressed	gene	tesmin/TSO1-like CXC domain containing protein, expressed	chr1	32015578	32021357	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g46610	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr3	26373800	26378548	-	CDS,promoter
3	LOC_Os01g59490	FAD dependent oxidoreductase domain containing protein, expressed	gene	FAD dependent oxidoreductase domain containing protein, expressed	chr1	34405333	34408175	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g20750	outer mitochondrial membrane porin, putative, expressed	gene	outer mitochondrial membrane porin, putative, expressed	chr3	11741307	11746674	+	CDS,three_prime_UTR
3	LOC_Os02g52810	remorin C-terminal domain containing protein, putative, expressed	gene	remorin C-terminal domain containing protein, putative, expressed	chr2	32280720	32286221	-	CDS,three_prime_UTR
3	LOC_Os08g09240	autophagy-related protein, putative, expressed	gene	autophagy-related protein, putative, expressed	chr8	5363352	5365506	+	three_prime_UTR,CDS,promoter,downstream
3	LOC_Os01g39790	esterase/lipase/thioesterase, putative, expressed	gene	esterase/lipase/thioesterase, putative, expressed	chr1	22437988	22440958	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g24700	expressed protein	gene	expressed protein	chr9	14693433	14698203	-	CDS
3	LOC_Os03g13450	expressed protein	gene	expressed protein	chr3	7273599	7276974	+	three_prime_UTR,downstream
3	LOC_Os07g37560	myosin-Vb, putative, expressed	gene	myosin-Vb, putative, expressed	chr7	22487833	22496731	-	CDS,three_prime_UTR
3	LOC_Os02g33290	expressed protein	gene	expressed protein	chr2	19775891	19777735	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os04g39880	Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed	gene	Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed	chr4	23562382	23567624	-	CDS
3	LOC_Os04g31010	expressed protein	gene	expressed protein	chr4	18363148	18366622	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g41400	eukaryotic translation initiation factor 2 subunit gamma, putative, expressed	gene	eukaryotic translation initiation factor 2 subunit gamma, putative, expressed	chr12	25613822	25618647	+	CDS,three_prime_UTR
3	LOC_Os04g41910	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr4	24649262	24654645	+	CDS,three_prime_UTR
3	LOC_Os06g43250	expressed protein	gene	expressed protein	chr6	25989416	25992230	+	CDS
3	LOC_Os03g07880	nuclear transcription factor Y subunit, putative, expressed	gene	nuclear transcription factor Y subunit, putative, expressed	chr3	4000991	4004424	-	CDS
3	LOC_Os01g47690	metallo-beta-lactamase family protein, putative, expressed	gene	metallo-beta-lactamase family protein, putative, expressed	chr1	27273632	27277516	-	CDS,three_prime_UTR
3	LOC_Os01g68104	ZOS1-21 - C2H2 zinc finger protein, expressed	gene	ZOS1-21 - C2H2 zinc finger protein, expressed	chr1	39587226	39590196	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g02320	nucleotidyltransferase, putative, expressed	gene	nucleotidyltransferase, putative, expressed	chr11	662978	670704	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g29630	ulp1 protease family protein, putative	gene	ulp1 protease family protein, putative	chr3	16887750	16891075	+	CDS
3	LOC_Os04g48790	rhoGAP domain containing protein, expressed	gene	rhoGAP domain containing protein, expressed	chr4	28920901	28924466	+	CDS
3	LOC_Os08g23320	para-hydroxybenzoate--polyprenyltransferase, mitochondrial precursor, putative, expressed	gene	para-hydroxybenzoate--polyprenyltransferase, mitochondrial precursor, putative, expressed	chr8	14076220	14079770	-	three_prime_UTR,promoter
3	LOC_Os07g45400	expressed protein	gene	expressed protein	chr7	27068988	27082502	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g55730	SSA2 - 2S albumin seed storage family protein precursor, putative, expressed	gene	SSA2 - 2S albumin seed storage family protein precursor, putative, expressed	chr3	31718848	31725142	-	CDS,three_prime_UTR
3	LOC_Os03g43720	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr3	24447214	24452023	+	CDS,three_prime_UTR
3	LOC_Os11g10540	expressed protein	gene	expressed protein	chr11	5769542	5773346	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os01g66600	rhodanese-like, putative, expressed	gene	rhodanese-like, putative, expressed	chr1	38683380	38687054	-	CDS,three_prime_UTR
3	LOC_Os08g22864	sec8 exocyst complex component specific domain containing protein, expressed	gene	sec8 exocyst complex component specific domain containing protein, expressed	chr8	13737765	13762815	-	CDS
3	LOC_Os04g52020	PHD-finger domain containing protein, putative, expressed	gene	PHD-finger domain containing protein, putative, expressed	chr4	30703034	30718798	-	CDS,three_prime_UTR
3	LOC_Os03g50330	CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr3	28701639	28709268	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g38680	transmembrane amino acid transporter protein, putative, expressed	gene	transmembrane amino acid transporter protein, putative, expressed	chr4	22792706	22795244	+	three_prime_UTR
3	LOC_Os07g32730	DNA repair protein rhp16, putative, expressed	gene	DNA repair protein rhp16, putative, expressed	chr7	19540488	19544813	+	CDS
3	LOC_Os08g03990	expressed protein	gene	expressed protein	chr8	1913037	1916257	+	CDS,three_prime_UTR
3	LOC_Os02g09640	hypothetical protein	gene	hypothetical protein	chr2	4954135	4955518	-	CDS,promoter,downstream
3	LOC_Os01g68760	WW domain containing protein, expressed	gene	WW domain containing protein, expressed	chr1	39937710	39943845	-	CDS,three_prime_UTR
3	LOC_Os08g44230	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr8	27839545	27844919	+	CDS
3	LOC_Os11g32810	Leucine Rich Repeat family protein, expressed	gene	Leucine Rich Repeat family protein, expressed	chr11	18918693	18922455	+	CDS
3	LOC_Os03g52340	endoplasmic oxidoreductin-1 precursor, putative, expressed	gene	endoplasmic oxidoreductin-1 precursor, putative, expressed	chr3	30055373	30059195	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g03669	expressed protein	gene	expressed protein	chr10	1641312	1645879	-	five_prime_UTR,downstream
3	LOC_Os01g07700	expressed protein	gene	expressed protein	chr1	3695142	3698805	-	CDS
3	LOC_Os05g35530	expressed protein	gene	expressed protein	chr5	21058258	21064676	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g23360	expressed protein	gene	expressed protein	chr9	13879625	13882901	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g45344	O-acyltransferase, putative, expressed	gene	O-acyltransferase, putative, expressed	chr2	27553334	27561180	+	CDS
3	LOC_Os04g57310	thiol-disulphide oxidoreductase DCC, putative, expressed	gene	thiol-disulphide oxidoreductase DCC, putative, expressed	chr4	33934397	33938496	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g46490	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr2	28340113	28345064	+	CDS,three_prime_UTR
3	LOC_Os03g59060	OsPP2Ac-2 - Phosphatase 2A isoform 2 belonging to family 2, expressed	gene	OsPP2Ac-2 - Phosphatase 2A isoform 2 belonging to family 2, expressed	chr3	33614780	33619413	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g34190	G-patch domain containing protein, expressed	gene	G-patch domain containing protein, expressed	chr1	18846925	18850770	+	CDS
3	LOC_Os09g26880	aldehyde dehydrogenase, putative, expressed	gene	aldehyde dehydrogenase, putative, expressed	chr9	16329087	16337640	-	CDS,promoter
3	LOC_Os01g70670	BTBM1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed	gene	BTBM1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed	chr1	40914292	40919742	+	CDS
3	LOC_Os05g29010	POLA4 - Putative DNA polymerase alpha complex subunit, expressed	gene	POLA4 - Putative DNA polymerase alpha complex subunit, expressed	chr5	16946137	16951374	-	three_prime_UTR,CDS
3	LOC_Os03g31570	proline-rich family protein, putative, expressed	gene	proline-rich family protein, putative, expressed	chr3	18014886	18019502	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g21490	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr2	12741599	12746532	-	CDS
3	LOC_Os01g33764	hypothetical protein	gene	hypothetical protein	chr1	18586679	18587777	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g50170	BRE, putative, expressed	gene	BRE, putative, expressed	chr6	30375241	30380350	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g48840	expressed protein	gene	expressed protein	chr4	28939378	28941844	-	CDS,three_prime_UTR
3	LOC_Os05g48060	phosphatidylserine synthase, putative, expressed	gene	phosphatidylserine synthase, putative, expressed	chr5	27489946	27495592	+	CDS
3	LOC_Os02g40420	expressed protein	gene	expressed protein	chr2	24477121	24481565	-	CDS,downstream
3	LOC_Os05g05280	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr5	2598314	2604143	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g11960	disease resistance protein RPM1, putative, expressed	gene	disease resistance protein RPM1, putative, expressed	chr11	6634015	6636675	-	five_prime_UTR,CDS,downstream
3	LOC_Os02g50010	APO, putative, expressed	gene	APO, putative, expressed	chr2	30551689	30555097	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g07810	protein of unknown function domain containing protein, expressed	gene	protein of unknown function domain containing protein, expressed	chr1	3741694	3743539	-	three_prime_UTR,promoter
3	LOC_Os05g06150	vegetative storage protein, putative, expressed	gene	vegetative storage protein, putative, expressed	chr5	3083783	3085480	+	CDS
3	LOC_Os01g45380	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr1	25756751	25761143	+	CDS
3	LOC_Os07g42770	CAMK_CAMK_like.35 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.35 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr7	25616170	25620833	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g02970	RNA binding protein, putative	gene	RNA binding protein, putative	chr12	1097580	1100299	-	CDS,promoter
3	LOC_Os01g41630	serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed	gene	serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed	chr1	23568735	23575500	+	CDS,three_prime_UTR
3	LOC_Os12g37570	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr12	23027641	23034893	+	CDS,three_prime_UTR
3	LOC_Os04g49450	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr4	29315818	29318642	-	three_prime_UTR
3	LOC_Os12g34220	OsFBL61 - F-box domain and LRR containing protein, expressed	gene	OsFBL61 - F-box domain and LRR containing protein, expressed	chr12	20715347	20718683	-	five_prime_UTR,CDS
3	LOC_Os11g16330	expressed protein	gene	expressed protein	chr11	9000942	9005329	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g30770	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr8	18990575	18996245	+	CDS
3	LOC_Os03g18620	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr3	10427843	10432648	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g13430	RGH1A, putative	gene	RGH1A, putative	chr11	7351911	7355349	+	CDS,promoter
3	LOC_Os05g47550	ANTH/ENTH domain containing protein, putative, expressed	gene	ANTH/ENTH domain containing protein, putative, expressed	chr5	27174012	27180878	-	CDS,downstream
3	LOC_Os12g41820	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr12	25867850	25873967	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g27540	expressed protein	gene	expressed protein	chr8	16794827	16798196	+	three_prime_UTR
3	LOC_Os01g02350	receptor-like kinase ARK1AS, putative, expressed	gene	receptor-like kinase ARK1AS, putative, expressed	chr1	741272	744156	-	CDS,three_prime_UTR
3	LOC_Os06g09170	zinc ion binding protein, putative, expressed	gene	zinc ion binding protein, putative, expressed	chr6	4611250	4614893	+	CDS,three_prime_UTR
3	LOC_Os01g03030	alanyl-tRNA synthetase, putative, expressed	gene	alanyl-tRNA synthetase, putative, expressed	chr1	1154213	1157601	-	CDS,downstream
3	LOC_Os02g12910	receptor-like protein kinase 5 precursor, putative, expressed	gene	receptor-like protein kinase 5 precursor, putative, expressed	chr2	6815291	6818362	+	CDS,promoter
3	LOC_Os05g48260	wax synthase, putative, expressed	gene	wax synthase, putative, expressed	chr5	27598048	27602321	+	CDS
3	LOC_Os08g31910	expressed protein	gene	expressed protein	chr8	19772503	19778821	-	CDS,three_prime_UTR
3	LOC_Os07g49330	phospholipase C, putative, expressed	gene	phospholipase C, putative, expressed	chr7	29544833	29547989	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g07490	YT521-B, putative, expressed	gene	YT521-B, putative, expressed	chr7	3725575	3730171	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g57630	phytosulfokine receptor precursor, putative, expressed	gene	phytosulfokine receptor precursor, putative, expressed	chr4	34113669	34117577	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g01870	Rf1, mitochondrial precursor, putative, expressed	gene	Rf1, mitochondrial precursor, putative, expressed	chr8	535344	538032	+	CDS,downstream
3	LOC_Os05g37980	PSF1 - Putative GINS complex subunit, expressed	gene	PSF1 - Putative GINS complex subunit, expressed	chr5	22219155	22221444	+	CDS,three_prime_UTR
3	LOC_Os04g41550	CRS1/YhbY domain containing protein, putative, expressed	gene	CRS1/YhbY domain containing protein, putative, expressed	chr4	24459032	24462725	+	CDS,three_prime_UTR
3	LOC_Os02g10310	fumarylacetoacetase, putative, expressed	gene	fumarylacetoacetase, putative, expressed	chr2	5414913	5418652	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g73760	IPP transferase, putative, expressed	gene	IPP transferase, putative, expressed	chr1	42722470	42725723	+	CDS,three_prime_UTR,promoter
3	LOC_Os02g45110	MT-A70 domain containing protein, expressed	gene	MT-A70 domain containing protein, expressed	chr2	27354548	27359931	+	CDS,three_prime_UTR
3	LOC_Os06g48780	60S acidic ribosomal protein, putative, expressed	gene	60S acidic ribosomal protein, putative, expressed	chr6	29526354	29527955	-	three_prime_UTR,promoter
3	LOC_Os07g44744	expressed protein	gene	expressed protein	chr7	26707137	26710906	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g43640	26S proteasome non-ATPase regulatory subunit 3, putative, expressed	gene	26S proteasome non-ATPase regulatory subunit 3, putative, expressed	chr8	27585526	27589352	-	CDS,three_prime_UTR
3	LOC_Os10g10360	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr10	5709983	5714488	-	CDS,three_prime_UTR
3	LOC_Os01g04920	glycosyl transferase, group 1 domain containing protein, expressed	gene	glycosyl transferase, group 1 domain containing protein, expressed	chr1	2274067	2277872	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g72250	uridine 5-monophosphate synthase, putative, expressed	gene	uridine 5-monophosphate synthase, putative, expressed	chr1	41891635	41895199	+	CDS
3	LOC_Os11g19210	beta-D-xylosidase, putative, expressed	gene	beta-D-xylosidase, putative, expressed	chr11	10966991	10973024	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g02970	Dicer, putative, expressed	gene	Dicer, putative, expressed	chr3	1194073	1203837	-	CDS,three_prime_UTR
3	LOC_Os03g26870	WD-40 repeat family protein, putative, expressed	gene	WD-40 repeat family protein, putative, expressed	chr3	15328167	15333550	+	CDS,five_prime_UTR
3	LOC_Os09g13610	PFT1, putative, expressed	gene	PFT1, putative, expressed	chr9	7913083	7924405	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g01630	DNA repair metallo-beta-lactamase, putative, expressed	gene	DNA repair metallo-beta-lactamase, putative, expressed	chr8	370457	372855	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g34650	expressed protein	gene	expressed protein	chr2	20776186	20780085	-	five_prime_UTR,CDS,downstream
3	LOC_Os09g33992	expressed protein	gene	expressed protein	chr9	20070042	20073171	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g04460	calcium-transporting ATPase, plasma membrane-type, putative, expressed	gene	calcium-transporting ATPase, plasma membrane-type, putative, expressed	chr11	1858334	1864303	+	CDS
3	LOC_Os02g26570	hypothetical protein	gene	hypothetical protein	chr2	15603222	15605304	-	CDS
3	LOC_Os08g01750	SAC domain containing protein, putative, expressed	gene	SAC domain containing protein, putative, expressed	chr8	450120	457227	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g49280	PMR5, putative, expressed	gene	PMR5, putative, expressed	chr7	29510575	29515383	-	three_prime_UTR,promoter
3	LOC_Os08g10510	aminotransferase, putative, expressed	gene	aminotransferase, putative, expressed	chr8	6169083	6174803	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g56280	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr2	34433892	34438893	-	CDS,three_prime_UTR
3	LOC_Os02g44500	glutathione peroxidase, putative, expressed	gene	glutathione peroxidase, putative, expressed	chr2	26923846	26926534	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g41440	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr5	24208496	24212593	+	CDS,five_prime_UTR
3	LOC_Os03g21600	expressed protein	gene	expressed protein	chr3	12333199	12336185	-	CDS,three_prime_UTR
3	LOC_Os02g47840	universal stress protein domain containing protein, putative, expressed	gene	universal stress protein domain containing protein, putative, expressed	chr2	29254194	29259628	-	CDS
3	LOC_Os07g08300	major facilitator superfamily antiporter, putative, expressed	gene	major facilitator superfamily antiporter, putative, expressed	chr7	4239045	4252498	+	five_prime_UTR,CDS,downstream
3	LOC_Os04g34720	PHD-finger domain containing protein, putative, expressed	gene	PHD-finger domain containing protein, putative, expressed	chr4	20829774	20838790	+	CDS,three_prime_UTR
3	LOC_Os01g64810	zinc finger DHHC domain-containing protein, putative, expressed	gene	zinc finger DHHC domain-containing protein, putative, expressed	chr1	37614912	37621052	-	CDS,three_prime_UTR
3	LOC_Os01g42160	MEGL14 - Maternally expressed gene MEG family protein precursor, putative, expressed	gene	MEGL14 - Maternally expressed gene MEG family protein precursor, putative, expressed	chr1	23895892	23896415	-	CDS,promoter
3	LOC_Os07g06090	expressed protein	gene	expressed protein	chr7	2945127	2948179	-	CDS,three_prime_UTR
3	LOC_Os08g14200	glycosyl hydrolases family 16, putative, expressed	gene	glycosyl hydrolases family 16, putative, expressed	chr8	8487374	8488926	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g07654	BT1 family protein, putative, expressed	gene	BT1 family protein, putative, expressed	chr7	3833231	3839290	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g06090	high-affinity nickel-transport family protein, putative, expressed	gene	high-affinity nickel-transport family protein, putative, expressed	chr3	3047586	3050796	-	CDS
3	LOC_Os03g11340	leucine-rich repeat resistance protein, putative, expressed	gene	leucine-rich repeat resistance protein, putative, expressed	chr3	5839708	5843996	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g44310	initiation factor 2 subunit family domain containing protein, expressed	gene	initiation factor 2 subunit family domain containing protein, expressed	chr3	24903664	24909155	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g22690	hypothetical protein	gene	hypothetical protein	chr10	11713364	11715724	-	CDS,downstream
3	LOC_Os02g01250	LSM domain containing protein, expressed	gene	LSM domain containing protein, expressed	chr2	135301	138097	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g17292	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr2	9912534	9919782	-	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os09g11510	phosphoglycerate mutase, putative, expressed	gene	phosphoglycerate mutase, putative, expressed	chr9	6433549	6437925	-	CDS,downstream
3	LOC_Os01g08950	expressed protein	gene	expressed protein	chr1	4492365	4494153	+	three_prime_UTR,downstream
3	LOC_Os06g20040	aspartic proteinase nepenthesin-2 precursor, putative, expressed	gene	aspartic proteinase nepenthesin-2 precursor, putative, expressed	chr6	11485957	11493271	-	three_prime_UTR,promoter
3	LOC_Os01g40330	DUF630/DUF632 domains containing protein, putative, expressed	gene	DUF630/DUF632 domains containing protein, putative, expressed	chr1	22766767	22771635	+	CDS
3	LOC_Os01g11946	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr1	6499706	6506149	-	CDS,three_prime_UTR,downstream
3	LOC_Os05g50480	protein of unknown function DUF1296 domain containing protein, expressed	gene	protein of unknown function DUF1296 domain containing protein, expressed	chr5	28877496	28885739	+	CDS
3	LOC_Os07g38280	insulin-degrading enzyme, putative, expressed	gene	insulin-degrading enzyme, putative, expressed	chr7	22974181	22990265	-	CDS
3	LOC_Os02g12010	receptor-like protein kinase precursor, putative	gene	receptor-like protein kinase precursor, putative	chr2	6228456	6231985	-	CDS,promoter
3	LOC_Os08g24420	SWP, putative, expressed	gene	SWP, putative, expressed	chr8	14749895	14756930	+	CDS,three_prime_UTR
3	LOC_Os02g19804	Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed	gene	Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed	chr2	11578485	11583587	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g46230	NAP domain containing protein, putative, expressed	gene	NAP domain containing protein, putative, expressed	chr5	26745360	26749888	-	CDS,three_prime_UTR
3	LOC_Os04g34450	expressed protein	gene	expressed protein	chr4	20690517	20700513	+	CDS
3	LOC_Os03g40410	expressed protein	gene	expressed protein	chr3	22450042	22452467	-	CDS
3	LOC_Os11g13694	AGAP007117-PA, putative, expressed	gene	AGAP007117-PA, putative, expressed	chr11	7507630	7524026	+	CDS
3	LOC_Os11g18990	histidine triad family protein, putative, expressed	gene	histidine triad family protein, putative, expressed	chr11	10819948	10826250	+	CDS
3	LOC_Os04g35770	pectinesterase, putative, expressed	gene	pectinesterase, putative, expressed	chr4	21623453	21625296	+	three_prime_UTR,promoter,downstream
3	LOC_Os10g16990	expressed protein	gene	expressed protein	chr10	8435234	8438489	+	three_prime_UTR
3	LOC_Os04g31190	dynamin family protein, putative, expressed	gene	dynamin family protein, putative, expressed	chr4	18487487	18497968	-	CDS,three_prime_UTR
3	LOC_Os02g51820	expressed protein	gene	expressed protein	chr2	31741843	31743893	+	three_prime_UTR,promoter,downstream
3	LOC_Os06g30320	NOC3 - Putative nucleolar complex subunit 3, expressed	gene	NOC3 - Putative nucleolar complex subunit 3, expressed	chr6	17504128	17510964	+	CDS,three_prime_UTR
3	LOC_Os06g06030	peptidase, T1 family, putative, expressed	gene	peptidase, T1 family, putative, expressed	chr6	2770070	2773077	-	CDS,downstream
3	LOC_Os07g14310	expressed protein	gene	expressed protein	chr7	8159539	8164046	-	CDS
3	LOC_Os01g27990	NPL4, putative, expressed	gene	NPL4, putative, expressed	chr1	15643786	15648494	+	CDS,three_prime_UTR
3	LOC_Os08g05870	oxysterol-binding protein-related protein 6, putative, expressed	gene	oxysterol-binding protein-related protein 6, putative, expressed	chr8	3159641	3164222	+	CDS,downstream
3	LOC_Os03g06410	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr3	3200308	3207295	+	CDS,three_prime_UTR
3	LOC_Os01g55260	AAA-type ATPase family protein, putative, expressed	gene	AAA-type ATPase family protein, putative, expressed	chr1	31805918	31810821	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g20190	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr3	11411433	11414206	+	CDS,downstream
3	LOC_Os03g51550	WD repeat-containing protein 5, putative, expressed	gene	WD repeat-containing protein 5, putative, expressed	chr3	29479057	29483589	+	CDS,promoter
3	LOC_Os08g40820	expressed protein	gene	expressed protein	chr8	25815047	25820752	+	three_prime_UTR,CDS
3	LOC_Os07g14160	polygalacturonase, putative, expressed	gene	polygalacturonase, putative, expressed	chr7	8077914	8081812	-	CDS
3	LOC_Os01g46510	peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed	gene	peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed	chr1	26452738	26464912	-	CDS,promoter
3	LOC_Os07g42760	expressed protein	gene	expressed protein	chr7	25610931	25615385	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g04280	3-phosphoshikimate 1-carboxyvinyltransferase, chloroplast precursor, putative, expressed	gene	3-phosphoshikimate 1-carboxyvinyltransferase, chloroplast precursor, putative, expressed	chr6	1815176	1818805	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g01830	OsPOP1 - Putative Prolyl Oligopeptidase homologue, expressed	gene	OsPOP1 - Putative Prolyl Oligopeptidase homologue, expressed	chr1	436613	448137	+	CDS,three_prime_UTR,promoter
3	LOC_Os06g11490	plastocyanin-like domain containing protein, putative, expressed	gene	plastocyanin-like domain containing protein, putative, expressed	chr6	6085799	6087249	+	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os12g04260	astaxanthin synthase KC28, putative	gene	astaxanthin synthase KC28, putative	chr12	1801703	1806513	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g33270	cyanate hydratase, putative, expressed	gene	cyanate hydratase, putative, expressed	chr10	17400372	17403627	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g20000	hypothetical protein	gene	hypothetical protein	chr2	11771411	11777938	+	CDS
3	LOC_Os03g01790	zinc finger, C3HC4 type domain containing protein	gene	zinc finger, C3HC4 type domain containing protein	chr3	487487	491438	+	CDS,downstream
3	LOC_Os02g09800	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr2	5054306	5058036	+	CDS,promoter,downstream
3	LOC_Os08g42560	tRNA synthetase class II core domain containing protein, expressed	gene	tRNA synthetase class II core domain containing protein, expressed	chr8	26897622	26901920	+	CDS,three_prime_UTR
3	LOC_Os08g12430	VERNALIZATION-INSENSITIVE, putative, expressed	gene	VERNALIZATION-INSENSITIVE, putative, expressed	chr8	7337831	7347082	-	CDS
3	LOC_Os09g25934	expressed protein	gene	expressed protein	chr9	15571920	15579901	+	three_prime_UTR,CDS,five_prime_UTR
3	LOC_Os02g10720	expressed protein	gene	expressed protein	chr2	5640774	5644630	-	CDS,three_prime_UTR
3	LOC_Os10g36860	CRS1/YhbY domain containing protein, expressed	gene	CRS1/YhbY domain containing protein, expressed	chr10	19675702	19678126	-	CDS,three_prime_UTR
3	LOC_Os08g03630	acyl-activating enzyme 14, putative, expressed	gene	acyl-activating enzyme 14, putative, expressed	chr8	1715479	1718884	-	three_prime_UTR,downstream
3	LOC_Os01g44310	dnaJ domain containing protein, expressed	gene	dnaJ domain containing protein, expressed	chr1	25416204	25424679	-	CDS
3	LOC_Os02g48180	OsDegp2 - Putative Deg protease homologue, expressed	gene	OsDegp2 - Putative Deg protease homologue, expressed	chr2	29477591	29489837	-	CDS
3	LOC_Os01g13170	ubiquitin-conjugating enzyme E2, putative, expressed	gene	ubiquitin-conjugating enzyme E2, putative, expressed	chr1	7339717	7344465	+	CDS,promoter
3	LOC_Os06g43870	expressed protein	gene	expressed protein	chr6	26420515	26426833	-	CDS,three_prime_UTR
3	LOC_Os01g09740	F-box/LRR-repeat protein, putative, expressed	gene	F-box/LRR-repeat protein, putative, expressed	chr1	5016893	5019150	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g56940	flap endonuclease, putative, expressed	gene	flap endonuclease, putative, expressed	chr1	32892335	32898740	+	CDS,promoter
3	LOC_Os02g40880	ribosomal protein L14, putative, expressed	gene	ribosomal protein L14, putative, expressed	chr2	24771858	24773768	-	three_prime_UTR,promoter
3	LOC_Os02g08420	cinnamoyl CoA reductase, putative, expressed	gene	cinnamoyl CoA reductase, putative, expressed	chr2	4497074	4500446	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g61400	sufB/sufD domain containing protein, putative, expressed	gene	sufB/sufD domain containing protein, putative, expressed	chr1	35504405	35507500	-	CDS,three_prime_UTR
3	LOC_Os11g37540	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr11	21693380	21707346	+	CDS,three_prime_UTR
3	LOC_Os06g47300	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr6	28669200	28673846	+	CDS,three_prime_UTR
3	LOC_Os03g30920	OsFBX95 - F-box domain containing protein, expressed	gene	OsFBX95 - F-box domain containing protein, expressed	chr3	17610126	17612442	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g11890	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr11	6592127	6598763	+	CDS
3	LOC_Os12g34380	glutathione synthetase, chloroplast precursor, putative, expressed	gene	glutathione synthetase, chloroplast precursor, putative, expressed	chr12	20805121	20809489	+	CDS,promoter,downstream
3	LOC_Os01g25440	thiamin pyrophosphokinase 1, putative, expressed	gene	thiamin pyrophosphokinase 1, putative, expressed	chr1	14390973	14397572	-	CDS,three_prime_UTR
3	LOC_Os01g42850	ThiF family domain containing protein, putative, expressed	gene	ThiF family domain containing protein, putative, expressed	chr1	24379592	24385643	-	CDS,promoter
3	LOC_Os03g56300	4Fe-4S binding domain containing protein, expressed	gene	4Fe-4S binding domain containing protein, expressed	chr3	32085230	32088496	-	CDS,three_prime_UTR,downstream
3	LOC_Os06g43850	ATP synthase F1, delta subunit family protein, putative, expressed	gene	ATP synthase F1, delta subunit family protein, putative, expressed	chr6	26407090	26409940	+	CDS,downstream
3	LOC_Os12g05630	hydrolase protein, putative	gene	hydrolase protein, putative	chr12	2587415	2588307	+	CDS,promoter,downstream
3	LOC_Os07g47940	expressed protein	gene	expressed protein	chr7	28629531	28630026	-	CDS,downstream
3	LOC_Os01g73150	expressed protein	gene	expressed protein	chr1	42420627	42423820	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g57450	Ser/Thr protein phosphatase family protein, putative, expressed	gene	Ser/Thr protein phosphatase family protein, putative, expressed	chr2	35201743	35205557	-	CDS,three_prime_UTR
3	LOC_Os01g48190	drought induced 19 protein, putative, expressed	gene	drought induced 19 protein, putative, expressed	chr1	27600443	27603882	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g07030	integrator complex subunit 3, putative, expressed	gene	integrator complex subunit 3, putative, expressed	chr11	3488365	3490641	-	three_prime_UTR,downstream
3	LOC_Os03g07960	expressed protein	gene	expressed protein	chr3	4068585	4071438	-	CDS,three_prime_UTR
3	LOC_Os01g16870	argonaute, putative, expressed	gene	argonaute, putative, expressed	chr1	9630272	9637877	-	CDS
3	LOC_Os01g48690	ribosomal protein rpS20, putative, expressed	gene	ribosomal protein rpS20, putative, expressed	chr1	27921186	27923324	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g02980	MATE domain containing protein, expressed	gene	MATE domain containing protein, expressed	chr2	1166107	1173549	-	three_prime_UTR,CDS,promoter,downstream
3	LOC_Os11g01020	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr11	2948	6498	+	CDS,promoter
3	LOC_Os02g51100	arsenical pump-driving ATPase, putative, expressed	gene	arsenical pump-driving ATPase, putative, expressed	chr2	31246689	31250095	-	CDS,three_prime_UTR
3	LOC_Os04g45910	placental protein 11 precursor, putative, expressed	gene	placental protein 11 precursor, putative, expressed	chr4	27005881	27010124	+	CDS
3	LOC_Os02g42670	DUF1771 domain containing protein, putative, expressed	gene	DUF1771 domain containing protein, putative, expressed	chr2	25659144	25667383	+	CDS
3	LOC_Os08g01270	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr8	171050	178450	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g35670	expressed protein	gene	expressed protein	chr6	20820733	20824196	-	three_prime_UTR
3	LOC_Os02g14760	CID11, putative, expressed	gene	CID11, putative, expressed	chr2	8164660	8169144	+	CDS,three_prime_UTR
3	LOC_Os03g06379	LYR motif containing protein, putative, expressed	gene	LYR motif containing protein, putative, expressed	chr3	3191061	3193448	+	CDS
3	LOC_Os03g15870	ribosomal protein L4, putative, expressed	gene	ribosomal protein L4, putative, expressed	chr3	8752489	8754961	+	three_prime_UTR,promoter,downstream
3	LOC_Os01g60120	transmembrane protein 56, putative, expressed	gene	transmembrane protein 56, putative, expressed	chr1	34775082	34779820	-	five_prime_UTR,CDS
3	LOC_Os02g55110	expressed protein	gene	expressed protein	chr2	33745993	33752537	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g49140	ribosomal RNA large subunit methyltransferase J, putative, expressed	gene	ribosomal RNA large subunit methyltransferase J, putative, expressed	chr6	29781069	29783934	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g17910	kinesin like protein, putative, expressed	gene	kinesin like protein, putative, expressed	chr3	9977842	9979966	+	three_prime_UTR,promoter,downstream
3	LOC_Os10g35150	expressed protein	gene	expressed protein	chr10	18682738	18686653	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g59480	expressed protein	gene	expressed protein	chr3	33842850	33847606	-	CDS,three_prime_UTR
3	LOC_Os10g30610	white-brown complex homolog protein, putative, expressed	gene	white-brown complex homolog protein, putative, expressed	chr10	15857566	15865503	+	CDS
3	LOC_Os03g01090	peptidyl-prolyl cis-trans isomerase, cyclophilin type, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, cyclophilin type, putative, expressed	chr3	62385	65162	+	CDS
3	LOC_Os05g01600	actin, putative, expressed	gene	actin, putative, expressed	chr5	354130	356637	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g24230	haloacid dehalogenase-like hydrolase family protein, putative, expressed	gene	haloacid dehalogenase-like hydrolase family protein, putative, expressed	chr9	14386517	14388887	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g30790	CW-type Zinc Finger, putative	gene	CW-type Zinc Finger, putative	chr5	17795782	17804675	-	CDS,promoter
3	LOC_Os10g33420	non-lysosomal glucosylceramidase, putative, expressed	gene	non-lysosomal glucosylceramidase, putative, expressed	chr10	17513712	17521072	-	CDS
3	LOC_Os10g38980	expressed protein	gene	expressed protein	chr10	20708032	20712074	-	CDS,three_prime_UTR
3	LOC_Os05g50990	TTL3, putative, expressed	gene	TTL3, putative, expressed	chr5	29195158	29199559	-	three_prime_UTR,promoter
3	LOC_Os08g42840	leucine rich repeat protein, putative, expressed	gene	leucine rich repeat protein, putative, expressed	chr8	27083696	27087149	+	CDS
3	LOC_Os03g63930	acyl carrier protein, putative, expressed	gene	acyl carrier protein, putative, expressed	chr3	36112544	36114941	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g59264	calreticulin family protein, expressed	gene	calreticulin family protein, expressed	chr3	33737227	33743310	-	CDS
3	LOC_Os12g39830	cyclin, putative, expressed	gene	cyclin, putative, expressed	chr12	24585971	24588513	-	three_prime_UTR,promoter
3	LOC_Os11g34370	phospholipase, patatin family, putative, expressed	gene	phospholipase, patatin family, putative, expressed	chr11	19678513	19681858	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g57140	GLTP domain containing protein, putative, expressed	gene	GLTP domain containing protein, putative, expressed	chr3	32574846	32577455	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g18360	BTBT1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed	gene	BTBT1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed	chr3	10285728	10289920	+	CDS
3	LOC_Os03g59580	hydrolase, NUDIX family, domain containing protein, expressed	gene	hydrolase, NUDIX family, domain containing protein, expressed	chr3	33909682	33913968	-	CDS,three_prime_UTR
3	LOC_Os07g01200	tetraacyldisaccharide 4-kinase, putative, expressed	gene	tetraacyldisaccharide 4-kinase, putative, expressed	chr7	114439	117055	-	three_prime_UTR
3	LOC_Os12g37780	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr12	23162944	23167260	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g21510	NOL1/NOP2/sun family protein, putative, expressed	gene	NOL1/NOP2/sun family protein, putative, expressed	chr2	12758245	12762234	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g52354	ribosomal protein S17, putative	gene	ribosomal protein S17, putative	chr4	30918298	30920022	+	CDS,downstream
3	LOC_Os03g19530	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr3	10982928	10987117	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g42580	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr8	26906120	26910915	+	CDS
3	LOC_Os06g45350	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr6	27411681	27416604	+	CDS,three_prime_UTR
3	LOC_Os05g19480	peroxisome assembly protein, putative, expressed	gene	peroxisome assembly protein, putative, expressed	chr5	11320433	11327053	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g51630	60S ribosomal protein L7, putative, expressed	gene	60S ribosomal protein L7, putative, expressed	chr4	30414792	30417797	+	three_prime_UTR
3	LOC_Os08g43900	carrier, putative, expressed	gene	carrier, putative, expressed	chr8	27672876	27673663	+	CDS,promoter,downstream
3	LOC_Os06g14080	ATMAP70 protein, putative, expressed	gene	ATMAP70 protein, putative, expressed	chr6	7847385	7853068	-	CDS,three_prime_UTR
3	LOC_Os08g31040	expressed protein	gene	expressed protein	chr8	19161424	19164014	+	CDS,three_prime_UTR,promoter
3	LOC_Os08g08650	expressed protein	gene	expressed protein	chr8	4998338	5001138	-	CDS
3	LOC_Os03g08999	dehydrogenase, putative, expressed	gene	dehydrogenase, putative, expressed	chr3	4666482	4667919	-	CDS
3	LOC_Os04g36780	expressed protein	gene	expressed protein	chr4	22021643	22024377	+	three_prime_UTR
3	LOC_Os08g03640	60S acidic ribosomal protein P0, putative, expressed	gene	60S acidic ribosomal protein P0, putative, expressed	chr8	1719409	1722142	-	CDS,downstream
3	LOC_Os09g32200	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr9	19215466	19219305	+	CDS,three_prime_UTR
3	LOC_Os04g58110	pyruvate kinase, putative, expressed	gene	pyruvate kinase, putative, expressed	chr4	34420085	34424017	-	CDS
3	LOC_Os05g25070	expressed protein	gene	expressed protein	chr5	14452876	14456781	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g39740	psaB translation factor, putative, expressed	gene	psaB translation factor, putative, expressed	chr2	23995062	23997323	+	CDS,three_prime_UTR
3	LOC_Os04g02870	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr4	1116074	1120563	-	CDS,three_prime_UTR
3	LOC_Os05g07764	carboxyl-terminal proteinase, putative, expressed	gene	carboxyl-terminal proteinase, putative, expressed	chr5	4179871	4185963	-	CDS
3	LOC_Os10g35160	expressed protein	gene	expressed protein	chr10	18698178	18701745	-	five_prime_UTR,CDS,downstream
3	LOC_Os06g03840	H-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed	gene	H-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed	chr6	1543045	1545217	-	three_prime_UTR,promoter,downstream
3	LOC_Os01g64920	nuclear matrix protein 1, putative, expressed	gene	nuclear matrix protein 1, putative, expressed	chr1	37685013	37688443	-	CDS,three_prime_UTR
3	LOC_Os03g13370	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr3	7210427	7220255	+	CDS
3	LOC_Os05g33030	kinesin motor domain containing protein, putative, expressed	gene	kinesin motor domain containing protein, putative, expressed	chr5	19296674	19301034	+	three_prime_UTR,downstream
3	LOC_Os02g46930	jmjC domain containing protein, expressed	gene	jmjC domain containing protein, expressed	chr2	28636904	28639754	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g55530	neurochondrin family protein, putative, expressed	gene	neurochondrin family protein, putative, expressed	chr2	33994688	34001354	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g15780	anthranilate synthase component I-1, chloroplast precursor, putative, expressed	gene	anthranilate synthase component I-1, chloroplast precursor, putative, expressed	chr3	8701726	8706732	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g28300	expressed protein	gene	expressed protein	chr5	16509023	16520477	+	CDS
3	LOC_Os07g22930	starch synthase, putative, expressed	gene	starch synthase, putative, expressed	chr7	12915284	12923332	-	CDS,five_prime_UTR
3	LOC_Os05g10730	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr5	5907831	5915235	+	CDS,three_prime_UTR
3	LOC_Os07g09140	expressed protein	gene	expressed protein	chr7	4772049	4773451	+	three_prime_UTR,CDS,downstream
3	LOC_Os09g36530	endonuclease/exonuclease/phosphatase family protein, putative, expressed	gene	endonuclease/exonuclease/phosphatase family protein, putative, expressed	chr9	21063527	21068254	-	CDS
3	LOC_Os07g42410	expressed protein	gene	expressed protein	chr7	25380704	25388553	+	CDS,three_prime_UTR
3	LOC_Os06g06450	heat shock protein STI, putative, expressed	gene	heat shock protein STI, putative, expressed	chr6	3034392	3038391	+	CDS
3	LOC_Os02g05830	ribulose bisphosphate carboxylase small chain, chloroplast precursor, putative, expressed	gene	ribulose bisphosphate carboxylase small chain, chloroplast precursor, putative, expressed	chr2	2874932	2876450	+	three_prime_UTR,promoter,downstream
3	LOC_Os01g24480	DUF1399 containing protein, putative, expressed	gene	DUF1399 containing protein, putative, expressed	chr1	13798929	13803764	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g57140	expressed protein	gene	expressed protein	chr2	34985331	34990772	+	CDS
3	LOC_Os09g24900	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr9	14866361	14869926	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g09890	smr domain containing protein, expressed	gene	smr domain containing protein, expressed	chr6	5035117	5040240	-	CDS,three_prime_UTR
3	LOC_Os03g61680	huntingtin-interacting protein HYPK, putative, expressed	gene	huntingtin-interacting protein HYPK, putative, expressed	chr3	34949890	34952256	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g04580	transcription factor TFIIF, putative, expressed	gene	transcription factor TFIIF, putative, expressed	chr6	1989030	1992737	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g57300	expressed protein	gene	expressed protein	chr3	32672705	32683941	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g03470	tetratricopeptide repeat containing protein, putative, expressed	gene	tetratricopeptide repeat containing protein, putative, expressed	chr2	1412107	1416005	+	CDS
3	LOC_Os08g06550	acyl CoA binding protein, putative, expressed	gene	acyl CoA binding protein, putative, expressed	chr8	3697315	3699556	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g37860	expressed protein	gene	expressed protein	chr12	23232491	23239382	+	CDS
3	LOC_Os11g13410	mla1, putative, expressed	gene	mla1, putative, expressed	chr11	7337836	7341729	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g42700	expressed protein	gene	expressed protein	chr12	26496675	26502438	+	CDS
3	LOC_Os05g13420	large tegument protein, putative, expressed	gene	large tegument protein, putative, expressed	chr5	7446278	7450237	-	five_prime_UTR,CDS
3	LOC_Os12g07970	transporter, major facilitator family, putative, expressed	gene	transporter, major facilitator family, putative, expressed	chr12	4043466	4046391	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g57280	N-dimethylguanosine tRNA methyltransferase, putative, expressed	gene	N-dimethylguanosine tRNA methyltransferase, putative, expressed	chr3	32658865	32664125	+	CDS
3	LOC_Os04g56070	COP9 signalosome complex subunit 5b, putative, expressed	gene	COP9 signalosome complex subunit 5b, putative, expressed	chr4	33209374	33212861	+	CDS,three_prime_UTR
3	LOC_Os06g38340	receptor-like protein kinase precursor, putative, expressed	gene	receptor-like protein kinase precursor, putative, expressed	chr6	22709848	22713669	-	CDS
3	LOC_Os03g64300	THION30 - Plant thionin family protein precursor, expressed	gene	THION30 - Plant thionin family protein precursor, expressed	chr3	36332953	36339823	+	CDS,three_prime_UTR
3	LOC_Os10g37480	STE_PAK_Ste20_STLK.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	gene	STE_PAK_Ste20_STLK.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	chr10	19989389	19999049	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g33080	leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed	gene	leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed	chr10	17260007	17264183	-	CDS,three_prime_UTR
3	LOC_Os12g06890	OsNucAP3 - Putative Nucleoporin Autopeptidase homologue, expressed	gene	OsNucAP3 - Putative Nucleoporin Autopeptidase homologue, expressed	chr12	3345690	3352040	+	CDS
3	LOC_Os01g56660	expressed protein	gene	expressed protein	chr1	32692716	32695442	+	CDS,promoter
3	LOC_Os10g38850	amine oxidase, putative, expressed	gene	amine oxidase, putative, expressed	chr10	20609615	20617563	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g57920	expressed protein	gene	expressed protein	chr2	35446405	35454110	-	three_prime_UTR,promoter,downstream
3	LOC_Os12g07010	ribosomal protein L3, putative, expressed	gene	ribosomal protein L3, putative, expressed	chr12	3428223	3430787	+	CDS,three_prime_UTR
3	LOC_Os02g57200	expressed protein	gene	expressed protein	chr2	35035204	35040572	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g49940	ESP4, putative, expressed	gene	ESP4, putative, expressed	chr1	28682826	28697570	-	CDS,three_prime_UTR
3	LOC_Os09g30340	photosystem I reaction center subunit, chloroplast precursor, putative, expressed	gene	photosystem I reaction center subunit, chloroplast precursor, putative, expressed	chr9	18468701	18470296	+	three_prime_UTR,promoter,downstream
3	LOC_Os10g01540	notchless protein, putative, expressed	gene	notchless protein, putative, expressed	chr10	347798	356989	-	CDS,three_prime_UTR
3	LOC_Os03g58600	PAZ domain containing protein, putative, expressed	gene	PAZ domain containing protein, putative, expressed	chr3	33364211	33373173	-	CDS,promoter
3	LOC_Os07g34730	acyltransferase, putative, expressed	gene	acyltransferase, putative, expressed	chr7	20807040	20811551	-	CDS,three_prime_UTR
3	LOC_Os08g12750	serine/threonine-protein kinase HT1, putative, expressed	gene	serine/threonine-protein kinase HT1, putative, expressed	chr8	7552774	7557839	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g12790	receptor protein kinase, putative	gene	receptor protein kinase, putative	chr1	7078900	7084596	+	CDS,downstream
3	LOC_Os09g32380	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr9	19335121	19339062	-	CDS
3	LOC_Os02g40680	mis12 protein, expressed	gene	mis12 protein, expressed	chr2	24661382	24664923	+	CDS,three_prime_UTR
3	LOC_Os02g55560	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr2	34020404	34024433	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g41190	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr7	24659139	24661600	+	CDS
3	LOC_Os03g53510	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr3	30682327	30685988	+	CDS,three_prime_UTR
3	LOC_Os03g10680	formin-like protein 6 precursor, putative, expressed	gene	formin-like protein 6 precursor, putative, expressed	chr3	5457096	5461607	+	CDS
3	LOC_Os03g18940	exonuclease, putative, expressed	gene	exonuclease, putative, expressed	chr3	10605790	10611180	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g27940	aspartic proteinase nepenthesin-1 precursor, putative, expressed	gene	aspartic proteinase nepenthesin-1 precursor, putative, expressed	chr9	16976481	16979622	+	three_prime_UTR,downstream
3	LOC_Os01g46750	AMP-binding enzyme, putative, expressed	gene	AMP-binding enzyme, putative, expressed	chr1	26627845	26635905	+	CDS
3	LOC_Os05g27880	BBF1 - 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains with a F5/8 type C discoidin domain, expressed	gene	BBF1 - 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains with a F5/8 type C discoidin domain, expressed	chr5	16209898	16216452	-	CDS,three_prime_UTR
3	LOC_Os04g58900	hydrolase, NUDIX family, domain containing protein, expressed	gene	hydrolase, NUDIX family, domain containing protein, expressed	chr4	34849714	34853238	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g57570	NADPH-dependent FMN reductase domain containing protein, expressed	gene	NADPH-dependent FMN reductase domain containing protein, expressed	chr1	33263187	33267400	+	CDS
3	LOC_Os07g09450	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr7	4976968	4980657	-	CDS,three_prime_UTR
3	LOC_Os12g06464	expressed protein	gene	expressed protein	chr12	3099854	3109419	-	five_prime_UTR,CDS
3	LOC_Os05g51500	eukaryotic translation initiation factor 5B, putative, expressed	gene	eukaryotic translation initiation factor 5B, putative, expressed	chr5	29465914	29472037	-	CDS,promoter
3	LOC_Os10g10170	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr10	5594004	5602087	-	three_prime_UTR,CDS
3	LOC_Os01g10840	CGMC_GSK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	gene	CGMC_GSK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	chr1	5773281	5777466	-	CDS,three_prime_UTR
3	LOC_Os07g30930	pentatricopeptide repeat domain containing protein, putative, expressed	gene	pentatricopeptide repeat domain containing protein, putative, expressed	chr7	18308689	18311475	+	three_prime_UTR,downstream
3	LOC_Os02g32730	neutral/alkaline invertase, putative, expressed	gene	neutral/alkaline invertase, putative, expressed	chr2	19431875	19436235	+	CDS
3	LOC_Os02g15270	tyrosine-protein phosphatase YVH1, putative, expressed	gene	tyrosine-protein phosphatase YVH1, putative, expressed	chr2	8536373	8538680	+	five_prime_UTR,CDS,promoter
3	LOC_Os09g28590	AGAP010609-PA, putative, expressed	gene	AGAP010609-PA, putative, expressed	chr9	17392568	17394621	+	CDS,three_prime_UTR
3	LOC_Os02g03440	LSM domain containing protein, expressed	gene	LSM domain containing protein, expressed	chr2	1399279	1401336	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g64360	OsFBX113 - F-box domain containing protein, expressed	gene	OsFBX113 - F-box domain containing protein, expressed	chr3	36374577	36377370	+	three_prime_UTR,downstream
3	LOC_Os12g19180	ATP binding protein, putative, expressed	gene	ATP binding protein, putative, expressed	chr12	11135285	11138969	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g22460	expressed protein	gene	expressed protein	chr10	11558470	11563304	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g14850	OsMADS72 - MADS-box family gene with M-alpha type-box, expressed	gene	OsMADS72 - MADS-box family gene with M-alpha type-box, expressed	chr3	8095477	8097702	-	CDS,promoter
3	LOC_Os12g36110	calmodulin binding protein, putative, expressed	gene	calmodulin binding protein, putative, expressed	chr12	22099345	22103442	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g41229	expressed protein	gene	expressed protein	chr3	22928759	22935646	+	CDS
3	LOC_Os04g34100	expressed protein	gene	expressed protein	chr4	20481729	20485329	+	CDS,three_prime_UTR
3	LOC_Os07g45360	DEAD/DEAH box helicase domain containing protein, expressed	gene	DEAD/DEAH box helicase domain containing protein, expressed	chr7	27054349	27058649	+	CDS,three_prime_UTR
3	LOC_Os08g34060	DUF1336 domain containing protein, expressed	gene	DUF1336 domain containing protein, expressed	chr8	21334880	21351868	+	CDS
3	LOC_Os03g19650	PPR2, putative, expressed	gene	PPR2, putative, expressed	chr3	11047206	11052183	+	three_prime_UTR
3	LOC_Os11g20630	unknown	gene	unknown	chr11	11950435	11952743	-	three_prime_UTR
3	LOC_Os05g05130	GA20663-PA, putative, expressed	gene	GA20663-PA, putative, expressed	chr5	2494958	2499418	+	CDS,downstream
3	LOC_Os06g01770	expressed protein	gene	expressed protein	chr6	443926	446831	-	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os10g01830	hypothetical protein	gene	hypothetical protein	chr10	534934	537002	+	CDS,promoter
3	LOC_Os03g26440	tRNA pseudouridine synthase family protein, putative	gene	tRNA pseudouridine synthase family protein, putative	chr3	15105284	15112258	+	CDS
3	LOC_Os05g41480	domain of unknown function, DUF250 domain containing protein, expressed	gene	domain of unknown function, DUF250 domain containing protein, expressed	chr5	24224988	24227039	+	three_prime_UTR,downstream
3	LOC_Os05g34320	beta-hexosaminidase precursor, putative, expressed	gene	beta-hexosaminidase precursor, putative, expressed	chr5	20252153	20258192	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g06644	expressed protein	gene	expressed protein	chr7	3240937	3243695	+	three_prime_UTR,downstream
3	LOC_Os07g12640	glycerol-3-phosphate dehydrogenase, putative, expressed	gene	glycerol-3-phosphate dehydrogenase, putative, expressed	chr7	7228016	7231299	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g13970	26S proteasome non-ATPase regulatory subunit 4, putative, expressed	gene	26S proteasome non-ATPase regulatory subunit 4, putative, expressed	chr3	7578297	7582685	-	CDS,three_prime_UTR
3	LOC_Os01g42630	C-5 cytosine-specific DNA methylase, putative, expressed	gene	C-5 cytosine-specific DNA methylase, putative, expressed	chr1	24244687	24248335	-	CDS,three_prime_UTR
3	LOC_Os04g40740	kelch repeat protein, putative, expressed	gene	kelch repeat protein, putative, expressed	chr4	23995542	24002124	-	CDS
3	LOC_Os04g25550	FACT complex subunit SPT16, putative, expressed	gene	FACT complex subunit SPT16, putative, expressed	chr4	14798099	14803955	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g31560	WD-40 repeat family protein, putative, expressed	gene	WD-40 repeat family protein, putative, expressed	chr8	19519383	19526066	+	CDS
3	LOC_Os02g33030	bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed	gene	bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed	chr2	19630403	19632986	+	five_prime_UTR,CDS,promoter
3	LOC_Os02g07870	ATP synthase, putative, expressed	gene	ATP synthase, putative, expressed	chr2	4119973	4127539	+	CDS,three_prime_UTR
3	LOC_Os02g44100	expressed protein	gene	expressed protein	chr2	26614423	26616451	+	three_prime_UTR,CDS,downstream
3	LOC_Os05g39870	CAMK_KIN1/SNF1/Nim1_like.24 - CAMK includes calcium/calmodulin depedent protein kinases	gene	CAMK_KIN1/SNF1/Nim1_like.24 - CAMK includes calcium/calmodulin depedent protein kinases	chr5	23366907	23371441	-	CDS
3	LOC_Os05g29860	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr5	17216378	17220257	-	CDS
3	LOC_Os01g74460	vacuolar fusion protein MON1 homolog A, putative, expressed	gene	vacuolar fusion protein MON1 homolog A, putative, expressed	chr1	43119037	43124677	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g45070	remorin, putative, expressed	gene	remorin, putative, expressed	chr4	26479556	26483307	-	CDS
3	LOC_Os06g48570	Ser/Thr protein phosphatase family protein, putative, expressed	gene	Ser/Thr protein phosphatase family protein, putative, expressed	chr6	29382239	29385917	-	CDS,three_prime_UTR
3	LOC_Os09g15644	expressed protein	gene	expressed protein	chr9	9545745	9546553	+	five_prime_UTR,promoter
3	LOC_Os07g03870	receptor like protein kinase, putative, expressed	gene	receptor like protein kinase, putative, expressed	chr7	1611858	1615245	-	CDS,three_prime_UTR
3	LOC_Os02g55640	proteasome maturation factor UMP1 family protein, expressed	gene	proteasome maturation factor UMP1 family protein, expressed	chr2	34069938	34072291	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g17490	expressed protein	gene	expressed protein	chr3	9720861	9723944	+	CDS,three_prime_UTR
3	LOC_Os04g47370	coiled-coil domain-containing protein 124, putative, expressed	gene	coiled-coil domain-containing protein 124, putative, expressed	chr4	27929731	27932387	+	three_prime_UTR,CDS,downstream
3	LOC_Os11g34300	chromatin modification-related protein EAF3, putative, expressed	gene	chromatin modification-related protein EAF3, putative, expressed	chr11	19631877	19640628	-	CDS,three_prime_UTR
3	LOC_Os02g04490	histone acetyltransferase HAC1, putative, expressed	gene	histone acetyltransferase HAC1, putative, expressed	chr2	1986422	1997362	+	CDS,three_prime_UTR
3	LOC_Os12g07390	expressed protein	gene	expressed protein	chr12	3640688	3643981	+	CDS
3	LOC_Os01g58444	expressed protein	gene	expressed protein	chr1	33781427	33785237	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os12g02950	EMB2748, putative, expressed	gene	EMB2748, putative, expressed	chr12	1092738	1095564	-	CDS,three_prime_UTR,downstream
3	LOC_Os05g41290	disease resistance RPP13-like protein 1, putative, expressed	gene	disease resistance RPP13-like protein 1, putative, expressed	chr5	24121866	24126622	+	CDS
3	LOC_Os03g11540	RPA1B - Putative single-stranded DNA binding complex subunit 1, expressed	gene	RPA1B - Putative single-stranded DNA binding complex subunit 1, expressed	chr3	5978594	5982099	+	three_prime_UTR,promoter,downstream
3	LOC_Os07g41830	hypothetical protein	gene	hypothetical protein	chr7	25050862	25053204	-	CDS,promoter
3	LOC_Os10g25600	expressed protein	gene	expressed protein	chr10	13194515	13198271	+	CDS,three_prime_UTR
3	LOC_Os10g03910	OsFBX354 - F-box domain containing protein, expressed	gene	OsFBX354 - F-box domain containing protein, expressed	chr10	1773641	1776654	-	CDS,three_prime_UTR
3	LOC_Os02g12580	OsPP2Ac-3 - Phosphatase 2A isoform 3 belonging to family 1, expressed	gene	OsPP2Ac-3 - Phosphatase 2A isoform 3 belonging to family 1, expressed	chr2	6572759	6577608	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g48590	CGMC_MAPKCMGC_2_SLT2y_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	gene	CGMC_MAPKCMGC_2_SLT2y_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	chr6	29397209	29401633	+	three_prime_UTR
3	LOC_Os03g59610	oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed	gene	oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed	chr3	33931793	33934243	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g09070	zinc-binding protein, putative, expressed	gene	zinc-binding protein, putative, expressed	chr2	4640149	4641458	-	CDS,promoter,downstream
3	LOC_Os12g43930	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr12	27230119	27232322	+	three_prime_UTR,downstream
3	LOC_Os08g44940	DUF260 domain containing protein, putative, expressed	gene	DUF260 domain containing protein, putative, expressed	chr8	28209873	28211095	-	CDS,downstream
3	LOC_Os12g07500	csAtPR5, putative, expressed	gene	csAtPR5, putative, expressed	chr12	3722610	3725841	-	CDS
3	LOC_Os06g48650	OsSub52 - Putative Subtilisin homologue, expressed	gene	OsSub52 - Putative Subtilisin homologue, expressed	chr6	29433358	29440108	+	CDS,three_prime_UTR
3	LOC_Os09g13570	CPuORF2 - conserved peptide uORF-containing transcript, expressed	gene	CPuORF2 - conserved peptide uORF-containing transcript, expressed	chr9	7870403	7872655	+	three_prime_UTR
3	LOC_Os01g01960	transcriptional repressor, putative, expressed	gene	transcriptional repressor, putative, expressed	chr1	512890	521448	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g26970	peptidase, T1 family, putative, expressed	gene	peptidase, T1 family, putative, expressed	chr3	15418795	15423371	+	CDS,promoter
3	LOC_Os06g10140	expressed protein	gene	expressed protein	chr6	5185448	5187308	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g43500	OR, putative, expressed	gene	OR, putative, expressed	chr2	26242755	26246139	-	CDS,three_prime_UTR
3	LOC_Os04g59624	SNF2 family N-terminal domain containing protein, expressed	gene	SNF2 family N-terminal domain containing protein, expressed	chr4	35266877	35274741	-	CDS
3	LOC_Os02g54170	BRUSHY 1, putative, expressed	gene	BRUSHY 1, putative, expressed	chr2	33210608	33213803	+	CDS,promoter
3	LOC_Os01g71630	expressed protein	gene	expressed protein	chr1	41509142	41518687	+	CDS
3	LOC_Os03g17440	expressed protein	gene	expressed protein	chr3	9699295	9702361	-	CDS,three_prime_UTR
3	LOC_Os03g59152	lethal leaf spot 1, putative	gene	lethal leaf spot 1, putative	chr3	33678675	33680607	+	CDS,downstream
3	LOC_Os01g64270	expressed protein	gene	expressed protein	chr1	37314248	37315646	+	three_prime_UTR,downstream
3	LOC_Os02g37930	hypoxia-responsive family protein, putative, expressed	gene	hypoxia-responsive family protein, putative, expressed	chr2	22921727	22924609	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g02850	tobamovirus multiplication protein, putative, expressed	gene	tobamovirus multiplication protein, putative, expressed	chr3	1118742	1122775	-	CDS,three_prime_UTR
3	LOC_Os08g04280	actin, putative, expressed	gene	actin, putative, expressed	chr8	2083557	2092721	+	CDS,three_prime_UTR,promoter
3	LOC_Os11g28430	expressed protein	gene	expressed protein	chr11	15904828	15907361	+	three_prime_UTR,downstream
3	LOC_Os01g56490	ubiquitin carboxyl-terminal hydrolase, putative, expressed	gene	ubiquitin carboxyl-terminal hydrolase, putative, expressed	chr1	32551567	32568712	-	CDS,three_prime_UTR
3	LOC_Os08g23120	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr8	13927737	13931996	+	CDS,three_prime_UTR
3	LOC_Os06g45080	rabGAP/TBC domain-containing protein, putative, expressed	gene	rabGAP/TBC domain-containing protein, putative, expressed	chr6	27264307	27268908	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g08680	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr3	4469567	4475111	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g23210	expressed protein	gene	expressed protein	chr4	13192875	13206807	+	CDS
3	LOC_Os01g71320	hexokinase, putative, expressed	gene	hexokinase, putative, expressed	chr1	41304274	41313484	-	CDS
3	LOC_Os05g22990	expressed protein	gene	expressed protein	chr5	13049499	13058743	-	CDS,three_prime_UTR
3	LOC_Os03g22730	nucleolar protein NOP5-1, putative	gene	nucleolar protein NOP5-1, putative	chr3	13125169	13128611	-	CDS
3	LOC_Os01g16940	MazG nucleotide pyrophosphohydrolase domain containing protein, expressed	gene	MazG nucleotide pyrophosphohydrolase domain containing protein, expressed	chr1	9683806	9688494	-	CDS
3	LOC_Os01g41870	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr1	23726717	23732036	+	CDS
3	LOC_Os01g55070	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr1	31660680	31663249	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g29910	expressed protein	gene	expressed protein	chr3	17038172	17042998	+	CDS,three_prime_UTR,five_prime_UTR
3	LOC_Os08g05320	expressed protein	gene	expressed protein	chr8	2785223	2791206	-	three_prime_UTR
3	LOC_Os01g01790	expressed protein	gene	expressed protein	chr1	415241	419497	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g10200	SAM-dependent methyltransferase, putative, expressed	gene	SAM-dependent methyltransferase, putative, expressed	chr12	5390903	5393905	-	three_prime_UTR,promoter
3	LOC_Os01g56630	dymeclin, putative, expressed	gene	dymeclin, putative, expressed	chr1	32668447	32675529	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g25400	uncharacterized protein all1601, putative, expressed	gene	uncharacterized protein all1601, putative, expressed	chr4	14702115	14707542	+	CDS,three_prime_UTR
3	LOC_Os06g12882	S phase cyclin A-associated protein in the ER, putative, expressed	gene	S phase cyclin A-associated protein in the ER, putative, expressed	chr6	7052690	7055224	+	CDS,three_prime_UTR
3	LOC_Os01g38229	peptidyl-prolyl isomerase, putative, expressed	gene	peptidyl-prolyl isomerase, putative, expressed	chr1	21413950	21440402	+	CDS
3	LOC_Os10g10500	vacuolar ATP synthase 98 kDa subunit, putative, expressed	gene	vacuolar ATP synthase 98 kDa subunit, putative, expressed	chr10	5797394	5805885	+	CDS,three_prime_UTR
3	LOC_Os01g32730	tetratricopeptide repeat containing protein, putative, expressed	gene	tetratricopeptide repeat containing protein, putative, expressed	chr1	17946701	17950618	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g08180	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr7	4155204	4159560	+	three_prime_UTR,downstream
3	LOC_Os02g53120	Peptidase family C50, putative, expressed	gene	Peptidase family C50, putative, expressed	chr2	32493342	32501282	-	CDS,promoter
3	LOC_Os02g47170	expressed protein	gene	expressed protein	chr2	28789714	28794817	-	CDS,three_prime_UTR
3	LOC_Os01g68040	CorA-like magnesium transporter protein, putative, expressed	gene	CorA-like magnesium transporter protein, putative, expressed	chr1	39550378	39554211	-	CDS,three_prime_UTR
3	LOC_Os05g33010	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr5	19291037	19295381	+	CDS,three_prime_UTR
3	LOC_Os04g01230	phosphoglycerate mutase, putative, expressed	gene	phosphoglycerate mutase, putative, expressed	chr4	176271	181245	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g38620	NADPH reductase, putative, expressed	gene	NADPH reductase, putative, expressed	chr9	22211909	22217771	-	CDS,three_prime_UTR
3	LOC_Os02g33560	expressed protein	gene	expressed protein	chr2	19956729	19962055	-	CDS,three_prime_UTR
3	LOC_Os02g33610	metallo-beta-lactamase, putative, expressed	gene	metallo-beta-lactamase, putative, expressed	chr2	20000085	20007984	+	CDS,three_prime_UTR
3	LOC_Os02g55670	expressed protein	gene	expressed protein	chr2	34083860	34094336	-	five_prime_UTR
3	LOC_Os01g18640	aminotransferase, putative, expressed	gene	aminotransferase, putative, expressed	chr1	10495580	10499919	-	CDS,three_prime_UTR
3	LOC_Os11g06690	serine esterase family protein, putative, expressed	gene	serine esterase family protein, putative, expressed	chr11	3252302	3257140	+	CDS
3	LOC_Os01g08750	expressed protein	gene	expressed protein	chr1	4373129	4393083	+	CDS
3	LOC_Os01g34350	RNA-dependent RNA polymerase, putative, expressed	gene	RNA-dependent RNA polymerase, putative, expressed	chr1	18939343	18944621	-	CDS,promoter
3	LOC_Os08g41580	ubiquitin carboxyl-terminal hydrolase, putative, expressed	gene	ubiquitin carboxyl-terminal hydrolase, putative, expressed	chr8	26260679	26265427	-	three_prime_UTR
3	LOC_Os07g49460	response regulator receiver domain containing protein, expressed	gene	response regulator receiver domain containing protein, expressed	chr7	29615713	29628231	+	CDS
3	LOC_Os04g43220	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr4	25388408	25394540	-	CDS,three_prime_UTR,downstream
3	LOC_Os02g40900	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr2	24777326	24780696	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g40390	scarecrow, putative	gene	scarecrow, putative	chr10	21555936	21565284	-	CDS,promoter
3	LOC_Os12g07700	nifU, putative, expressed	gene	nifU, putative, expressed	chr12	3866727	3868855	+	CDS,three_prime_UTR
3	LOC_Os01g43320	transmembrane amino acid transporter protein, putative, expressed	gene	transmembrane amino acid transporter protein, putative, expressed	chr1	24752655	24757815	-	CDS
3	LOC_Os02g21570	expressed protein	gene	expressed protein	chr2	12812002	12812672	-	five_prime_UTR,CDS,downstream
3	LOC_Os03g59650	BRCA1 C Terminus domain containing protein, expressed	gene	BRCA1 C Terminus domain containing protein, expressed	chr3	33955243	33960934	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g31170	inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed	gene	inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed	chr3	17744154	17747343	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g04120	ZOS1-03 - C2H2 zinc finger protein, expressed	gene	ZOS1-03 - C2H2 zinc finger protein, expressed	chr1	1800924	1805267	-	five_prime_UTR,downstream
3	LOC_Os03g42100	helix-loop-helix DNA-binding domain containing protein	gene	helix-loop-helix DNA-binding domain containing protein	chr3	23431490	23432886	-	CDS,downstream
3	LOC_Os07g24190	CESA3 - cellulose synthase, expressed	gene	CESA3 - cellulose synthase, expressed	chr7	13740291	13746263	-	CDS,three_prime_UTR
3	LOC_Os02g12494	unknown	gene	unknown	chr2	6533712	6538155	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os08g34270	expressed protein	gene	expressed protein	chr8	21498191	21502641	+	three_prime_UTR,downstream
3	LOC_Os05g04610	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr5	2168955	2171485	+	five_prime_UTR,CDS,promoter
3	LOC_Os01g55300	DNA-directed polymerase, putative, expressed	gene	DNA-directed polymerase, putative, expressed	chr1	31829253	31835940	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g14660	legume lectins beta domain containing protein, putative, expressed	gene	legume lectins beta domain containing protein, putative, expressed	chr9	8688905	8690854	-	CDS,promoter,downstream
3	LOC_Os03g28140	1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed	gene	1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed	chr3	16180669	16191396	-	CDS,promoter
3	LOC_Os01g69850	OsMADS65 - MADS-box family gene with MIKC* type-box, expressed	gene	OsMADS65 - MADS-box family gene with MIKC* type-box, expressed	chr1	40343286	40363541	+	CDS,three_prime_UTR
3	LOC_Os05g32720	early-responsive to dehydration protein-related, putative, expressed	gene	early-responsive to dehydration protein-related, putative, expressed	chr5	19097624	19103585	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g01510	MRH1, putative, expressed	gene	MRH1, putative, expressed	chr12	305267	309513	-	CDS
3	LOC_Os01g47200	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr1	26974571	26977060	+	three_prime_UTR,promoter,downstream
3	LOC_Os01g50040	DNA binding protein, putative, expressed	gene	DNA binding protein, putative, expressed	chr1	28745467	28750301	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g04790	expressed protein	gene	expressed protein	chr12	2041901	2044474	+	CDS,three_prime_UTR
3	LOC_Os02g10920	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr2	5798886	5806501	-	CDS
3	LOC_Os01g56150	OsProCP1 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed	gene	OsProCP1 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed	chr1	32333608	32337046	-	CDS
3	LOC_Os07g01130	pentatricopeptide containing protein, putative, expressed	gene	pentatricopeptide containing protein, putative, expressed	chr7	72162	81300	+	CDS,downstream
3	LOC_Os04g59000	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr4	34906894	34913599	-	CDS
3	LOC_Os11g01510	ubiquitin-activating enzyme, putative, expressed	gene	ubiquitin-activating enzyme, putative, expressed	chr11	294655	300611	-	CDS
3	LOC_Os03g30890	S-locus-like receptor protein kinase, putative, expressed	gene	S-locus-like receptor protein kinase, putative, expressed	chr3	17598070	17602314	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g40110	GTP binding protein, putative, expressed	gene	GTP binding protein, putative, expressed	chr10	21402053	21405720	-	CDS
3	LOC_Os06g34710	expressed protein	gene	expressed protein	chr6	20168369	20176264	+	three_prime_UTR
3	LOC_Os05g41580	calcium-transporting ATPase, plasma membrane-type, putative, expressed	gene	calcium-transporting ATPase, plasma membrane-type, putative, expressed	chr5	24284626	24291964	+	CDS
3	LOC_Os08g44320	low molecular weight protein-tyrosine-phosphatase slr0328, putative, expressed	gene	low molecular weight protein-tyrosine-phosphatase slr0328, putative, expressed	chr8	27886181	27890324	-	CDS,three_prime_UTR
3	LOC_Os02g50330	RNA-dependent RNA polymerase, putative, expressed	gene	RNA-dependent RNA polymerase, putative, expressed	chr2	30723194	30730590	+	five_prime_UTR,CDS
3	LOC_Os03g21964	expressed protein	gene	expressed protein	chr3	12566655	12569762	+	CDS,three_prime_UTR
3	LOC_Os06g09120	glutamate receptor 2.8 precursor, putative, expressed	gene	glutamate receptor 2.8 precursor, putative, expressed	chr6	4586790	4590088	-	CDS
3	LOC_Os11g12340	disease resistance protein RPM1, putative, expressed	gene	disease resistance protein RPM1, putative, expressed	chr11	6883802	6892102	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os05g28500	ubiquitin family protein, putative, expressed	gene	ubiquitin family protein, putative, expressed	chr5	16626690	16630724	+	CDS,three_prime_UTR
3	LOC_Os03g58060	XRN 5'-3' exonuclease N-terminus domain containing protein, expressed	gene	XRN 5'-3' exonuclease N-terminus domain containing protein, expressed	chr3	33042203	33053291	+	three_prime_UTR,CDS,downstream
3	LOC_Os10g36690	dehydration response related protein, putative, expressed	gene	dehydration response related protein, putative, expressed	chr10	19548508	19554745	+	CDS
3	LOC_Os01g07376	thioredoxin, putative, expressed	gene	thioredoxin, putative, expressed	chr1	3488310	3490991	-	CDS,three_prime_UTR,downstream
3	LOC_Os06g12530	CS domain containing protein, putative, expressed	gene	CS domain containing protein, putative, expressed	chr6	6793151	6795571	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g01380	clathrin heavy chain, putative, expressed	gene	clathrin heavy chain, putative, expressed	chr11	233174	243464	+	CDS
3	LOC_Os12g08140	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr12	4162621	4167240	+	three_prime_UTR
3	LOC_Os04g35550	hypothetical protein	gene	hypothetical protein	chr4	21489374	21489822	-	CDS,downstream
3	LOC_Os09g31040	EF hand family protein, putative, expressed	gene	EF hand family protein, putative, expressed	chr9	18671136	18672105	+	CDS,three_prime_UTR
3	LOC_Os11g13490	expressed protein	gene	expressed protein	chr11	7387492	7391119	-	CDS
3	LOC_Os09g17680	NAD kinase, putative, expressed	gene	NAD kinase, putative, expressed	chr9	10809134	10811497	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g45070	diphthamide biosynthesis protein 3, putative, expressed	gene	diphthamide biosynthesis protein 3, putative, expressed	chr6	27261808	27263975	+	three_prime_UTR,promoter,downstream
3	LOC_Os03g64020	expressed protein	gene	expressed protein	chr3	36173508	36176078	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g43100	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr1	24583610	24588379	+	CDS
3	LOC_Os05g48380	ubiquitin-conjugating enzyme domain containing protein, expressed	gene	ubiquitin-conjugating enzyme domain containing protein, expressed	chr5	27671068	27675680	-	CDS,three_prime_UTR,downstream
3	LOC_Os12g31470	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr12	18894239	18902927	+	CDS
3	LOC_Os04g37940	expressed protein	gene	expressed protein	chr4	22377793	22381677	-	CDS,downstream
3	LOC_Os01g70980	expressed protein	gene	expressed protein	chr1	41084858	41087125	-	three_prime_UTR
3	LOC_Os03g55130	expressed protein	gene	expressed protein	chr3	31370945	31374522	+	CDS,three_prime_UTR
3	LOC_Os11g32270	N-rich protein, putative, expressed	gene	N-rich protein, putative, expressed	chr11	18602905	18609647	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g02960	nascent polypeptide-associated complex subunit alpha, putative, expressed	gene	nascent polypeptide-associated complex subunit alpha, putative, expressed	chr3	1193253	1195503	+	three_prime_UTR,downstream
3	LOC_Os08g15500	expressed protein	gene	expressed protein	chr8	9423764	9427477	+	CDS,three_prime_UTR
3	LOC_Os06g20090	NUP155, putative, expressed	gene	NUP155, putative, expressed	chr6	11514409	11525626	+	CDS,three_prime_UTR
3	LOC_Os06g30310	alpha-glucan water dikinase, chloroplast precursor, putative, expressed	gene	alpha-glucan water dikinase, chloroplast precursor, putative, expressed	chr6	17487835	17500187	+	CDS
3	LOC_Os05g34800	expressed protein	gene	expressed protein	chr5	20585726	20587971	-	three_prime_UTR,promoter
3	LOC_Os02g32610	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr2	19318351	19326266	-	CDS,three_prime_UTR
3	LOC_Os03g44500	serine/threonine protein phosphatase, putative, expressed	gene	serine/threonine protein phosphatase, putative, expressed	chr3	25040395	25049152	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g01270	peptidyl-prolyl cis-trans isomerase, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, putative, expressed	chr5	185622	188487	+	CDS,three_prime_UTR
3	LOC_Os06g38760	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr6	23004344	23010474	+	CDS,promoter
3	LOC_Os01g57410	pentatricopeptide repeat domain containing protein, putative, expressed	gene	pentatricopeptide repeat domain containing protein, putative, expressed	chr1	33181545	33185126	+	three_prime_UTR,downstream
3	LOC_Os11g03110	GRAS family transcription factor domain containing protein, expressed	gene	GRAS family transcription factor domain containing protein, expressed	chr11	1118743	1122351	+	three_prime_UTR
3	LOC_Os07g09670	galactosyltransferase family protein, putative, expressed	gene	galactosyltransferase family protein, putative, expressed	chr7	5127595	5132143	-	CDS,three_prime_UTR
3	LOC_Os01g24980	naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed	gene	naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed	chr1	14076603	14079690	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os01g36540	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr1	20279810	20281519	+	CDS,downstream
3	LOC_Os10g35960	NAD-dependent malic enzyme, mitochondrial precursor, putative, expressed	gene	NAD-dependent malic enzyme, mitochondrial precursor, putative, expressed	chr10	19147123	19152577	+	CDS,three_prime_UTR
3	LOC_Os02g30150	disease resistance protein, putative, expressed	gene	disease resistance protein, putative, expressed	chr2	17904762	17909604	+	CDS,promoter
3	LOC_Os03g39820	expressed protein	gene	expressed protein	chr3	22146474	22148480	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g53810	expressed protein	gene	expressed protein	chr2	32951550	32955521	+	CDS
3	LOC_Os03g05720	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr3	2844705	2850685	+	CDS,downstream
3	LOC_Os02g02710	zinc carboxypeptidase family protein, putative, expressed	gene	zinc carboxypeptidase family protein, putative, expressed	chr2	1017473	1022003	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g46962	VHS and GAT domain containing protein, expressed	gene	VHS and GAT domain containing protein, expressed	chr2	28667133	28671003	+	CDS,promoter
3	LOC_Os09g26770	ribosomal L18p/L5e family protein, putative, expressed	gene	ribosomal L18p/L5e family protein, putative, expressed	chr9	16258677	16264913	+	CDS,three_prime_UTR
3	LOC_Os03g64210	T-complex protein, putative, expressed	gene	T-complex protein, putative, expressed	chr3	36273952	36277815	-	CDS,downstream
3	LOC_Os02g54254	saccharopine dehydrogenase, putative, expressed	gene	saccharopine dehydrogenase, putative, expressed	chr2	33247218	33260713	-	CDS
3	LOC_Os07g29600	zinc finger, C3HC4 type, domain containing protein, expressed	gene	zinc finger, C3HC4 type, domain containing protein, expressed	chr7	17398830	17402108	+	CDS,three_prime_UTR
3	LOC_Os10g13630	expressed protein	gene	expressed protein	chr10	7401191	7410740	+	CDS,three_prime_UTR
3	LOC_Os04g21110	phosphoribulokinase/Uridine kinase family protein, expressed	gene	phosphoribulokinase/Uridine kinase family protein, expressed	chr4	11859836	11878225	+	CDS,three_prime_UTR
3	LOC_Os01g05960	receptor kinase, putative, expressed	gene	receptor kinase, putative, expressed	chr1	2838934	2842514	+	CDS
3	LOC_Os07g01890	expressed protein	gene	expressed protein	chr7	534602	537317	-	three_prime_UTR,promoter
3	LOC_Os04g47120	acyl-CoA thioesterase 2, putative, expressed	gene	acyl-CoA thioesterase 2, putative, expressed	chr4	27798973	27805426	+	CDS,three_prime_UTR
3	LOC_Os10g05230	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr10	2566402	2571041	+	CDS
3	LOC_Os03g30092	expressed protein	gene	expressed protein	chr3	17171274	17173002	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g55280	semialdehyde dehydrogenase, NAD binding domain containing protein, putative, expressed	gene	semialdehyde dehydrogenase, NAD binding domain containing protein, putative, expressed	chr3	31453269	31456493	+	CDS
3	LOC_Os07g47110	OsFBT11 - F-box and tubby domain containing protein, expressed	gene	OsFBT11 - F-box and tubby domain containing protein, expressed	chr7	28172007	28175827	+	CDS,three_prime_UTR
3	LOC_Os04g52870	OsFBW1 - F-box domain and WD40 repeat containing protein, expressed	gene	OsFBW1 - F-box domain and WD40 repeat containing protein, expressed	chr4	31300262	31303439	-	three_prime_UTR,promoter
3	LOC_Os03g62780	S1 RNA binding domain containing protein, expressed	gene	S1 RNA binding domain containing protein, expressed	chr3	35513409	35516766	-	three_prime_UTR,CDS,promoter
3	LOC_Os01g37832	thioredoxin, putative, expressed	gene	thioredoxin, putative, expressed	chr1	21166828	21171616	+	CDS,three_prime_UTR,five_prime_UTR,promoter
3	LOC_Os02g43180	OsGrx_C3 - glutaredoxin subgroup I, expressed	gene	OsGrx_C3 - glutaredoxin subgroup I, expressed	chr2	26025639	26028031	+	CDS,three_prime_UTR,five_prime_UTR
3	LOC_Os11g10330	OsFBX416 - F-box domain containing protein, expressed	gene	OsFBX416 - F-box domain containing protein, expressed	chr11	5606996	5610836	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g55490	casein kinase II subunit alpha-2, putative, expressed	gene	casein kinase II subunit alpha-2, putative, expressed	chr3	31558927	31563354	+	CDS,three_prime_UTR
3	LOC_Os03g24600	peptide methionine sulfoxide reductase msrB, putative, expressed	gene	peptide methionine sulfoxide reductase msrB, putative, expressed	chr3	14008882	14012549	+	CDS,three_prime_UTR
3	LOC_Os05g49020	60S ribosomal protein L18a-1, putative, expressed	gene	60S ribosomal protein L18a-1, putative, expressed	chr5	28049975	28052359	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g12650	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr12	6970547	6976644	+	CDS,downstream
3	LOC_Os05g38370	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	chr5	22429840	22432453	-	three_prime_UTR,CDS,promoter
3	LOC_Os04g52640	SHR5-receptor-like kinase, putative, expressed	gene	SHR5-receptor-like kinase, putative, expressed	chr4	31132483	31142935	-	CDS
3	LOC_Os05g34470	expressed protein	gene	expressed protein	chr5	20375816	20379188	+	three_prime_UTR,CDS,promoter
3	LOC_Os03g25930	emp24/gp25L/p24 family protein, putative, expressed	gene	emp24/gp25L/p24 family protein, putative, expressed	chr3	14842468	14845992	-	CDS,promoter
3	LOC_Os10g10434	dimethyladenosine transferase, putative, expressed	gene	dimethyladenosine transferase, putative, expressed	chr10	5747475	5753009	+	CDS
3	LOC_Os05g43040	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr5	24934739	24937013	+	CDS,three_prime_UTR
3	LOC_Os10g40790	expressed protein	gene	expressed protein	chr10	21836101	21843486	+	CDS
3	LOC_Os05g25780	rhodanese-like domain containing protein, putative, expressed	gene	rhodanese-like domain containing protein, putative, expressed	chr5	14940402	14943313	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g56040	chaperone protein dnaJ, putative, expressed	gene	chaperone protein dnaJ, putative, expressed	chr2	34294755	34301860	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g28180	ribosomal protein, putative, expressed	gene	ribosomal protein, putative, expressed	chr4	16473741	16476426	-	three_prime_UTR
3	LOC_Os04g52580	tetratricopeptide repeat domain containing protein	gene	tetratricopeptide repeat domain containing protein	chr4	31074985	31077331	-	CDS
3	LOC_Os11g29240	expressed protein	gene	expressed protein	chr11	16483394	16488716	-	CDS,three_prime_UTR
3	LOC_Os09g31470	AT hook motif domain containing protein, expressed	gene	AT hook motif domain containing protein, expressed	chr9	18963580	18967444	-	CDS,three_prime_UTR
3	LOC_Os02g58320	BRICK1, putative, expressed	gene	BRICK1, putative, expressed	chr2	35673952	35675461	-	CDS,promoter
3	LOC_Os11g03550	expressed protein	gene	expressed protein	chr11	1371343	1374732	-	CDS
3	LOC_Os04g54670	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr4	32338069	32346147	-	CDS
3	LOC_Os09g10760	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr9	5869961	5872202	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g57020	expressed protein	gene	expressed protein	chr4	33801283	33804826	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g24170	phosphatidylinositol-4-phosphate 5-kinase, putative, expressed	gene	phosphatidylinositol-4-phosphate 5-kinase, putative, expressed	chr3	13718533	13722028	+	CDS
3	LOC_Os03g51890	hypothetical protein	gene	hypothetical protein	chr3	29741901	29748891	-	CDS
3	LOC_Os11g38330	ZOS11-06 - C2H2 zinc finger protein, expressed	gene	ZOS11-06 - C2H2 zinc finger protein, expressed	chr11	22231564	22238503	+	CDS,three_prime_UTR
3	LOC_Os01g29390	expressed protein	gene	expressed protein	chr1	16467632	16478785	-	five_prime_UTR,CDS
3	LOC_Os04g42444	expressed protein	gene	expressed protein	chr4	24932842	24935406	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os04g39270	indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed	gene	indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed	chr4	23177023	23180567	-	CDS,three_prime_UTR,downstream
3	LOC_Os05g09380	AR791, putative, expressed	gene	AR791, putative, expressed	chr5	5266914	5270759	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g60370	histidine acid phosphatase, putative, expressed	gene	histidine acid phosphatase, putative, expressed	chr3	34327609	34333006	+	CDS,downstream
3	LOC_Os11g16580	endonuclease III-like protein 1, putative, expressed	gene	endonuclease III-like protein 1, putative, expressed	chr11	9182268	9187581	+	CDS
3	LOC_Os04g47480	DUF630/DUF632 domains containing protein, putative, expressed	gene	DUF630/DUF632 domains containing protein, putative, expressed	chr4	27985149	27989139	+	CDS
3	LOC_Os12g01390	clathrin heavy chain, putative, expressed	gene	clathrin heavy chain, putative, expressed	chr12	248725	258877	+	CDS
3	LOC_Os09g21250	expressed protein	gene	expressed protein	chr9	12824718	12827236	+	CDS,three_prime_UTR
3	LOC_Os04g54940	ATEB1A-like microtubule associated protein, putative, expressed	gene	ATEB1A-like microtubule associated protein, putative, expressed	chr4	32499434	32502511	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g10090	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr11	5437555	5444329	+	five_prime_UTR,CDS
3	LOC_Os11g02720	expressed protein	gene	expressed protein	chr11	881111	884905	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g07540	SHOOT1 protein, putative, expressed	gene	SHOOT1 protein, putative, expressed	chr7	3758924	3761066	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g56390	tRNA wybutosine-synthesizing protein 1, putative, expressed	gene	tRNA wybutosine-synthesizing protein 1, putative, expressed	chr3	32140075	32143635	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g47690	HMG1/2, putative, expressed	gene	HMG1/2, putative, expressed	chr4	28108042	28111007	+	three_prime_UTR,CDS,promoter
3	LOC_Os10g03780	OsFBX351 - F-box domain containing protein, expressed	gene	OsFBX351 - F-box domain containing protein, expressed	chr10	1706795	1714004	-	CDS
3	LOC_Os02g31890	ZOS2-08 - C2H2 zinc finger protein	gene	ZOS2-08 - C2H2 zinc finger protein	chr2	18833325	18836550	-	CDS,downstream
3	LOC_Os07g42626	STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed	gene	STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed	chr7	25515459	25522190	+	three_prime_UTR,downstream
3	LOC_Os11g10180	OsFBX412 - F-box domain containing protein, expressed	gene	OsFBX412 - F-box domain containing protein, expressed	chr11	5514332	5517680	+	CDS,three_prime_UTR
3	LOC_Os04g51009	OsWAK52 - OsWAK short gene, expressed	gene	OsWAK52 - OsWAK short gene, expressed	chr4	30010793	30015576	-	five_prime_UTR
3	LOC_Os01g71180	pentatricopeptide repeat protein PPR1106-17, putative	gene	pentatricopeptide repeat protein PPR1106-17, putative	chr1	41182757	41185507	+	CDS
3	LOC_Os04g48060	RFC2 - Putative clamp loader of PCNA, replication factor C subunit 2, expressed	gene	RFC2 - Putative clamp loader of PCNA, replication factor C subunit 2, expressed	chr4	28412164	28415153	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g42690	jmjC domain containing protein, expressed	gene	jmjC domain containing protein, expressed	chr10	22954187	22960244	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g53280	50S ribosomal protein L20, putative, expressed	gene	50S ribosomal protein L20, putative, expressed	chr1	30607319	30610840	+	three_prime_UTR
3	LOC_Os12g13290	expressed protein	gene	expressed protein	chr12	7387046	7391258	+	three_prime_UTR
3	LOC_Os07g23900	OsFBX234 - F-box domain containing protein, expressed	gene	OsFBX234 - F-box domain containing protein, expressed	chr7	13512136	13514786	-	CDS,three_prime_UTR
3	LOC_Os03g22420	AAA-type ATPase family protein, putative, expressed	gene	AAA-type ATPase family protein, putative, expressed	chr3	12834863	12846332	-	three_prime_UTR,CDS
3	LOC_Os04g54110	ARK3, putative	gene	ARK3, putative	chr4	32053267	32057421	+	CDS
3	LOC_Os09g04810	myosin heavy chain-related, putative, expressed	gene	myosin heavy chain-related, putative, expressed	chr9	2560847	2564528	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g37410	TBC domain containing protein, expressed	gene	TBC domain containing protein, expressed	chr10	19953425	19956881	+	CDS,downstream
3	LOC_Os02g40830	succinyl-CoA ligase beta-chain, mitochondrial precursor, putative, expressed	gene	succinyl-CoA ligase beta-chain, mitochondrial precursor, putative, expressed	chr2	24735880	24742096	+	CDS,three_prime_UTR
3	LOC_Os11g13990	AAA-type ATPase family protein, putative, expressed	gene	AAA-type ATPase family protein, putative, expressed	chr11	7749070	7758142	-	CDS
3	LOC_Os02g27030	cysteine proteinase 1 precursor, putative, expressed	gene	cysteine proteinase 1 precursor, putative, expressed	chr2	15885658	15889427	+	CDS,three_prime_UTR
3	LOC_Os12g40530	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr12	25045341	25048935	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os08g27700	hypothetical protein	gene	hypothetical protein	chr8	16870883	16873693	-	CDS
3	LOC_Os02g38950	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr2	23532478	23534384	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g10180	methyltransferase domain containing protein, putative, expressed	gene	methyltransferase domain containing protein, putative, expressed	chr10	5609440	5612245	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g42450	ribosomal protein S2, putative, expressed	gene	ribosomal protein S2, putative, expressed	chr7	25412433	25414692	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g36630	expressed protein	gene	expressed protein	chr9	21134009	21136351	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g05390	expressed protein	gene	expressed protein	chr6	2432394	2436378	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g15570	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr6	8825990	8831312	-	CDS,promoter
3	LOC_Os03g62250	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr3	35248960	35257296	-	CDS,promoter
3	LOC_Os04g34984	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	gene	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	chr4	21092012	21096807	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g02200	armadillo/beta-catenin repeat family protein, putative, expressed	gene	armadillo/beta-catenin repeat family protein, putative, expressed	chr1	647128	650881	-	CDS,three_prime_UTR
3	LOC_Os08g35220	cyclin-dependent kinase C-3, putative, expressed	gene	cyclin-dependent kinase C-3, putative, expressed	chr8	22216732	22224774	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g24750	Ser/Thr protein phosphatase family protein, putative, expressed	gene	Ser/Thr protein phosphatase family protein, putative, expressed	chr1	13921318	13926429	-	CDS
3	LOC_Os01g02870	auxin-induced protein 5NG4, putative, expressed	gene	auxin-induced protein 5NG4, putative, expressed	chr1	1009259	1011410	+	CDS
3	LOC_Os02g58570	PRLI-interacting factor A, putative, expressed	gene	PRLI-interacting factor A, putative, expressed	chr2	35798720	35800672	+	three_prime_UTR,promoter,downstream
3	LOC_Os02g35720	signal peptidase complex subunit 2, putative, expressed	gene	signal peptidase complex subunit 2, putative, expressed	chr2	21456307	21458651	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g09860	acetyltransferase, GNAT family, putative, expressed	gene	acetyltransferase, GNAT family, putative, expressed	chr3	4905205	4907797	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g40630	SFT2, putative, expressed	gene	SFT2, putative, expressed	chr6	24222755	24225797	+	CDS,promoter
3	LOC_Os02g13360	expressed protein	gene	expressed protein	chr2	7126757	7133480	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g43310	photosystem II reaction center W protein, chloroplast precursor, putative, expressed	gene	photosystem II reaction center W protein, chloroplast precursor, putative, expressed	chr5	25130879	25135034	+	three_prime_UTR
3	LOC_Os06g13220	expressed protein	gene	expressed protein	chr6	7259408	7263017	+	CDS,promoter
3	LOC_Os08g03870	2-aminoethanethiol dioxygenase, putative, expressed	gene	2-aminoethanethiol dioxygenase, putative, expressed	chr8	1842882	1845221	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g05660	dual specificity protein phosphatase, putative, expressed	gene	dual specificity protein phosphatase, putative, expressed	chr12	2601354	2606908	+	three_prime_UTR,downstream
3	LOC_Os06g20030	chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed	gene	chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed	chr6	11482109	11485823	+	three_prime_UTR,downstream
3	LOC_Os06g03750	dehydration response related protein, putative, expressed	gene	dehydration response related protein, putative, expressed	chr6	1477932	1484781	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g21269	expressed protein	gene	expressed protein	chr2	12620356	12625647	+	CDS
3	LOC_Os02g37870	Brix domain containing protein, putative, expressed	gene	Brix domain containing protein, putative, expressed	chr2	22879224	22882259	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g55470	expressed protein	gene	expressed protein	chr3	31546798	31551215	+	CDS
3	LOC_Os10g35790	Rf1, mitochondrial precursor, putative	gene	Rf1, mitochondrial precursor, putative	chr10	19070778	19072142	-	CDS
3	LOC_Os10g37630	UBX domain-containing protein, putative, expressed	gene	UBX domain-containing protein, putative, expressed	chr10	20063903	20068256	-	CDS,downstream
3	LOC_Os12g04990	acyl-CoA synthetase protein, putative, expressed	gene	acyl-CoA synthetase protein, putative, expressed	chr12	2160546	2169072	-	CDS,three_prime_UTR
3	LOC_Os06g48700	DNA binding protein, putative, expressed	gene	DNA binding protein, putative, expressed	chr6	29461264	29466334	-	CDS
3	LOC_Os05g27340	expressed protein	gene	expressed protein	chr5	15831243	15832975	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g29880	3-hydroxyacyl-CoA dehydrogenase, putative, expressed	gene	3-hydroxyacyl-CoA dehydrogenase, putative, expressed	chr5	17228852	17235984	+	three_prime_UTR,CDS,downstream
3	LOC_Os05g28950	CAAX amino terminal protease family protein, putative, expressed	gene	CAAX amino terminal protease family protein, putative, expressed	chr5	16912580	16915613	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g23740	OsPDIL2-2  protein disulfide isomerase PDIL2-2, expressed	gene	OsPDIL2-2  protein disulfide isomerase PDIL2-2, expressed	chr1	13352603	13356484	+	CDS,three_prime_UTR
3	LOC_Os01g53250	NADPH reductase, putative, expressed	gene	NADPH reductase, putative, expressed	chr1	30592390	30597478	-	CDS,three_prime_UTR
3	LOC_Os06g05240	zinc carboxypeptidase family protein, putative, expressed	gene	zinc carboxypeptidase family protein, putative, expressed	chr6	2357309	2364541	-	three_prime_UTR,downstream
3	LOC_Os05g39790	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr5	23312105	23315039	-	CDS
3	LOC_Os10g13550	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	gene	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	chr10	7350426	7354485	-	CDS,three_prime_UTR
3	LOC_Os01g08510	MAR-binding filament-like protein 1, putative, expressed	gene	MAR-binding filament-like protein 1, putative, expressed	chr1	4207553	4212302	-	three_prime_UTR,promoter
3	LOC_Os12g04650	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr12	1968668	1970642	+	three_prime_UTR,downstream
3	LOC_Os03g49140	ABC1 protein At2g40090 precursor, putative, expressed	gene	ABC1 protein At2g40090 precursor, putative, expressed	chr3	27982347	27984281	-	CDS
3	LOC_Os07g37760	lysine ketoglutarate reductase trans-splicing related 1, putative, expressed	gene	lysine ketoglutarate reductase trans-splicing related 1, putative, expressed	chr7	22647350	22653357	-	CDS
3	LOC_Os04g12540	receptor-like protein kinase, putative, expressed	gene	receptor-like protein kinase, putative, expressed	chr4	6934346	6937984	-	CDS,downstream
3	LOC_Os07g41680	dehydrodolichyl diphosphate synthase, putative, expressed	gene	dehydrodolichyl diphosphate synthase, putative, expressed	chr7	24972576	24975592	+	CDS,three_prime_UTR,five_prime_UTR,downstream
3	LOC_Os12g02260	nucleotidyltransferase, putative, expressed	gene	nucleotidyltransferase, putative, expressed	chr12	706530	714414	-	CDS,three_prime_UTR
3	LOC_Os07g44050	expressed protein	gene	expressed protein	chr7	26324098	26325649	-	three_prime_UTR,promoter
3	LOC_Os03g01110	RNA methyltransferase, TrmH family protein, putative, expressed	gene	RNA methyltransferase, TrmH family protein, putative, expressed	chr3	71028	84340	+	CDS,promoter,downstream
3	LOC_Os03g49260	lipoxygenase, putative, expressed	gene	lipoxygenase, putative, expressed	chr3	28042495	28046779	+	five_prime_UTR,CDS,promoter
3	LOC_Os09g21520	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr9	13017710	13022172	+	CDS,three_prime_UTR
3	LOC_Os02g09470	tic21, putative, expressed	gene	tic21, putative, expressed	chr2	4859708	4862872	+	CDS,three_prime_UTR
3	LOC_Os03g55704	expressed protein	gene	expressed protein	chr3	31708833	31714769	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g44870	expressed protein	gene	expressed protein	chr11	26683694	26686100	+	three_prime_UTR
3	LOC_Os06g08720	OsSCP32 - Putative Serine Carboxypeptidase homologue, expressed	gene	OsSCP32 - Putative Serine Carboxypeptidase homologue, expressed	chr6	4344919	4352385	-	CDS,three_prime_UTR
3	LOC_Os02g37920	expressed protein	gene	expressed protein	chr2	22911947	22918620	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g16640	split hand/foot malformation type 1, putative	gene	split hand/foot malformation type 1, putative	chr1	9440805	9442986	-	CDS,promoter
3	LOC_Os07g49110	D-alanine--D-alanine ligase family, putative, expressed	gene	D-alanine--D-alanine ligase family, putative, expressed	chr7	29391455	29400921	+	CDS
3	LOC_Os04g28820	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr4	16891659	16898574	-	three_prime_UTR,promoter
3	LOC_Os01g02884	ATP-dependent RNA helicase DHX36, putative, expressed	gene	ATP-dependent RNA helicase DHX36, putative, expressed	chr1	1023184	1029112	+	CDS,three_prime_UTR
3	LOC_Os02g58080	transporter, major facilitator family, putative, expressed	gene	transporter, major facilitator family, putative, expressed	chr2	35542944	35547591	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g17240	transporter, major facilitator family, putative, expressed	gene	transporter, major facilitator family, putative, expressed	chr1	9912366	9916294	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g68380	expressed protein	gene	expressed protein	chr1	39728937	39735774	+	CDS,downstream
3	LOC_Os01g43870	NLI interacting factor-like phosphatase, putative, expressed	gene	NLI interacting factor-like phosphatase, putative, expressed	chr1	25131841	25137103	+	CDS,three_prime_UTR
3	LOC_Os06g01200	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr6	141308	145648	+	three_prime_UTR
3	LOC_Os07g11290	expressed protein	gene	expressed protein	chr7	6231594	6233547	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g29224	expressed protein	gene	expressed protein	chr7	17125209	17128936	+	three_prime_UTR
3	LOC_Os12g02660	expressed protein	gene	expressed protein	chr12	905832	926900	-	CDS,three_prime_UTR
3	LOC_Os12g38260	expressed protein	gene	expressed protein	chr12	23460907	23465702	+	CDS
3	LOC_Os02g34860	Regulator of chromosome condensation domain containing protein, expressed	gene	Regulator of chromosome condensation domain containing protein, expressed	chr2	20908008	20913252	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g22090	expressed protein	gene	expressed protein	chr12	12422722	12430108	+	three_prime_UTR
3	LOC_Os03g56190	cytochrome c oxidase-related, putative, expressed	gene	cytochrome c oxidase-related, putative, expressed	chr3	32010521	32012425	+	three_prime_UTR,downstream
3	LOC_Os04g01130	chromatin modification-related protein EAF3, putative, expressed	gene	chromatin modification-related protein EAF3, putative, expressed	chr4	88024	96924	+	CDS
3	LOC_Os08g37350	ubiquitin carboxyl-terminal hydrolase family protein, expressed	gene	ubiquitin carboxyl-terminal hydrolase family protein, expressed	chr8	23590978	23598418	-	CDS
3	LOC_Os03g57190	TCP family transcription factor, putative, expressed	gene	TCP family transcription factor, putative, expressed	chr3	32606931	32611170	+	three_prime_UTR
3	LOC_Os02g20930	apoptosis inhibitor 5, putative, expressed	gene	apoptosis inhibitor 5, putative, expressed	chr2	12365584	12375312	+	CDS,three_prime_UTR
3	LOC_Os04g51794	DNA binding protein, putative, expressed	gene	DNA binding protein, putative, expressed	chr4	30505498	30511566	-	three_prime_UTR,CDS
3	LOC_Os09g29840	heat shock protein, putative, expressed	gene	heat shock protein, putative, expressed	chr9	18149617	18154511	-	CDS,three_prime_UTR
3	LOC_Os01g25810	powdery mildew resistance protein PM3A, putative, expressed	gene	powdery mildew resistance protein PM3A, putative, expressed	chr1	14611521	14616096	-	CDS,promoter,downstream
3	LOC_Os01g40000	expressed protein	gene	expressed protein	chr1	22556405	22560682	-	three_prime_UTR,promoter
3	LOC_Os04g09810	riboflavin biosynthesis protein ribD, putative, expressed	gene	riboflavin biosynthesis protein ribD, putative, expressed	chr4	5259110	5262193	-	CDS,three_prime_UTR
3	LOC_Os08g30020	membrane protein, putative, expressed	gene	membrane protein, putative, expressed	chr8	18449892	18455461	+	CDS,three_prime_UTR,five_prime_UTR,downstream
3	LOC_Os12g07980	RNA polymerases N 8 kDa subunit, putative, expressed	gene	RNA polymerases N 8 kDa subunit, putative, expressed	chr12	4050743	4053293	+	CDS,downstream
3	LOC_Os09g28019	nucleoporin p58/p45, putative, expressed	gene	nucleoporin p58/p45, putative, expressed	chr9	17007657	17013364	-	CDS,three_prime_UTR
3	LOC_Os01g64780	COV1, putative, expressed	gene	COV1, putative, expressed	chr1	37583117	37587074	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g47920	SCARECROW, putative	gene	SCARECROW, putative	chr11	28375794	28377575	+	CDS,promoter
3	LOC_Os04g45834	DUF584 domain containing protein, putative, expressed	gene	DUF584 domain containing protein, putative, expressed	chr4	26951916	26959162	+	three_prime_UTR,promoter
3	LOC_Os05g34900	wound-responsive family protein, putative, expressed	gene	wound-responsive family protein, putative, expressed	chr5	20665689	20673318	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g19490	expressed protein	gene	expressed protein	chr11	11215916	11218337	+	CDS,promoter
3	LOC_Os12g18760	peptidase family C78 domain containing protein, expressed	gene	peptidase family C78 domain containing protein, expressed	chr12	10845553	10853694	+	CDS
3	LOC_Os08g44350	histidine-containing phosphotransfer protein, putative, expressed	gene	histidine-containing phosphotransfer protein, putative, expressed	chr8	27901859	27906841	+	CDS
3	LOC_Os05g48390	ubiquitin conjugating enzyme protein, putative, expressed	gene	ubiquitin conjugating enzyme protein, putative, expressed	chr5	27677362	27685307	-	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os07g48960	OsLonP3 - Putative Lon protease homologue, expressed	gene	OsLonP3 - Putative Lon protease homologue, expressed	chr7	29291316	29301850	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g35710	expressed protein	gene	expressed protein	chr10	19021227	19024264	+	CDS,three_prime_UTR
3	LOC_Os02g05500	pyridoxamine 5'-phosphate oxidase family protein, putative, expressed	gene	pyridoxamine 5'-phosphate oxidase family protein, putative, expressed	chr2	2659670	2663046	+	CDS,three_prime_UTR,promoter
3	LOC_Os05g46210	OsPOP10 - Putative Prolyl Oligopeptidase homologue, expressed	gene	OsPOP10 - Putative Prolyl Oligopeptidase homologue, expressed	chr5	26739017	26742672	+	CDS
3	LOC_Os10g30420	transcription factor Dp, putative, expressed	gene	transcription factor Dp, putative, expressed	chr10	15741606	15746558	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g37470	oxidoreductase, aldo/keto reductase family protein, putative, expressed	gene	oxidoreductase, aldo/keto reductase family protein, putative, expressed	chr4	22131699	22134300	+	CDS
3	LOC_Os10g11060	ACI13, putative, expressed	gene	ACI13, putative, expressed	chr10	6128064	6131805	+	CDS
3	LOC_Os02g05970	phytosulfokine receptor precursor, putative, expressed	gene	phytosulfokine receptor precursor, putative, expressed	chr2	2971985	2975380	-	CDS,downstream
3	LOC_Os11g05870	harpin-induced protein 1 domain containing protein, expressed	gene	harpin-induced protein 1 domain containing protein, expressed	chr11	2742209	2745674	-	three_prime_UTR,promoter
3	LOC_Os03g08820	expressed protein	gene	expressed protein	chr3	4549866	4558151	+	CDS,downstream
3	LOC_Os03g17570	response regulator receiver domain containing protein, expressed	gene	response regulator receiver domain containing protein, expressed	chr3	9758415	9767626	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g58400	zinc finger C3HC4 type family protein, putative, expressed	gene	zinc finger C3HC4 type family protein, putative, expressed	chr1	33739606	33744814	-	CDS
3	LOC_Os09g33740	Zinc finger, ZZ type domain containing protein, expressed	gene	Zinc finger, ZZ type domain containing protein, expressed	chr9	19921609	19931232	+	CDS,downstream
3	LOC_Os01g62020	NAD dependent epimerase/dehydratase family domain containing protein, expressed	gene	NAD dependent epimerase/dehydratase family domain containing protein, expressed	chr1	35895931	35899539	+	CDS,three_prime_UTR
3	LOC_Os07g17390	PsbP, putative, expressed	gene	PsbP, putative, expressed	chr7	10261054	10264884	+	CDS
3	LOC_Os06g04530	OsClp9 - Putative Clp protease homologue, expressed	gene	OsClp9 - Putative Clp protease homologue, expressed	chr6	1948425	1952326	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g51120	vesicle transport v-SNARE protein, putative, expressed	gene	vesicle transport v-SNARE protein, putative, expressed	chr1	29363482	29366984	+	CDS,three_prime_UTR
3	LOC_Os02g36570	ABC1 family domain containing protein, putative, expressed	gene	ABC1 family domain containing protein, putative, expressed	chr2	22071620	22079414	+	CDS,three_prime_UTR
3	LOC_Os04g41990	autophagy-related protein 10, putative, expressed	gene	autophagy-related protein 10, putative, expressed	chr4	24690870	24692758	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g21999	expressed protein	gene	expressed protein	chr3	12604776	12607484	-	three_prime_UTR,promoter
3	LOC_Os02g19650	hydrolase, alpha/beta fold family domain containing protein, expressed	gene	hydrolase, alpha/beta fold family domain containing protein, expressed	chr2	11484324	11488300	-	CDS
3	LOC_Os06g41690	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr6	24965560	24976880	-	CDS
3	LOC_Os04g38780	transcription factor, putative, expressed	gene	transcription factor, putative, expressed	chr4	22860546	22863165	+	CDS,downstream
3	LOC_Os01g64690	LSM domain containing protein, expressed	gene	LSM domain containing protein, expressed	chr1	37526356	37528059	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g28950	pollen signalling protein with adenylyl cyclase activity, putative, expressed	gene	pollen signalling protein with adenylyl cyclase activity, putative, expressed	chr11	16286575	16294594	-	CDS
3	LOC_Os10g34350	aminotransferase, classes I and II, domain containing protein, expressed	gene	aminotransferase, classes I and II, domain containing protein, expressed	chr10	18240408	18242883	-	CDS,three_prime_UTR
3	LOC_Os02g35310	12-oxophytodienoate reductase, putative, expressed	gene	12-oxophytodienoate reductase, putative, expressed	chr2	21223084	21225498	-	CDS,promoter
3	LOC_Os02g44010	expressed protein	gene	expressed protein	chr2	26567370	26570830	-	CDS,three_prime_UTR
3	LOC_Os01g62620	DHHC zinc finger domain containing protein, expressed	gene	DHHC zinc finger domain containing protein, expressed	chr1	36256392	36260701	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g24050	expressed protein	gene	expressed protein	chr11	13168657	13173703	-	three_prime_UTR
3	LOC_Os04g02140	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr4	705796	710490	-	CDS,three_prime_UTR
3	LOC_Os01g25720	disease resistance protein RGA4, putative, expressed	gene	disease resistance protein RGA4, putative, expressed	chr1	14575561	14580941	-	three_prime_UTR
3	LOC_Os12g42980	cysteine synthase, putative, expressed	gene	cysteine synthase, putative, expressed	chr12	26665045	26669749	-	CDS,promoter
3	LOC_Os06g48520	disease resistance protein RPM1, putative	gene	disease resistance protein RPM1, putative	chr6	29351932	29355138	-	CDS,promoter,downstream
3	LOC_Os02g35500	NAD binding domain of 6-phosphogluconate dehydrogenase containing protein, expressed	gene	NAD binding domain of 6-phosphogluconate dehydrogenase containing protein, expressed	chr2	21338394	21342701	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g30730	SART-1 family protein, putative, expressed	gene	SART-1 family protein, putative, expressed	chr2	18305661	18311428	-	CDS,three_prime_UTR
3	LOC_Os09g36800	3-dehydroquinate synthase, putative, expressed	gene	3-dehydroquinate synthase, putative, expressed	chr9	21225473	21228910	-	CDS,three_prime_UTR
3	LOC_Os03g08810	expressed protein	gene	expressed protein	chr3	4544308	4547187	+	CDS,three_prime_UTR
3	LOC_Os04g41340	4-nitrophenylphosphatase, putative, expressed	gene	4-nitrophenylphosphatase, putative, expressed	chr4	24342758	24345366	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g49750	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr3	28307325	28313013	+	CDS,three_prime_UTR
3	LOC_Os11g09690	OsFBX410 - F-box domain containing protein	gene	OsFBX410 - F-box domain containing protein	chr11	5169325	5171934	-	CDS
3	LOC_Os07g12470	expressed protein	gene	expressed protein	chr7	7105972	7109147	+	three_prime_UTR
3	LOC_Os09g27950	galactosyltransferase, putative, expressed	gene	galactosyltransferase, putative, expressed	chr9	16978990	16982977	-	CDS,three_prime_UTR
3	LOC_Os02g57670	ribosomal L9, putative, expressed	gene	ribosomal L9, putative, expressed	chr2	35314444	35317118	-	CDS,three_prime_UTR
3	LOC_Os08g44380	L1P family of ribosomal proteins domain containing protein, expressed	gene	L1P family of ribosomal proteins domain containing protein, expressed	chr8	27926635	27929963	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g55960	NADPH reductase, putative, expressed	gene	NADPH reductase, putative, expressed	chr4	33144681	33150755	+	CDS
3	LOC_Os03g02600	riboflavin biosynthesis protein ribD, putative, expressed	gene	riboflavin biosynthesis protein ribD, putative, expressed	chr3	959443	961654	+	CDS,three_prime_UTR
3	LOC_Os03g53170	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr3	30495294	30499977	+	CDS,three_prime_UTR
3	LOC_Os03g49126	expressed protein	gene	expressed protein	chr3	27976903	27980126	+	CDS
3	LOC_Os08g04790	xylosyltransferase, putative, expressed	gene	xylosyltransferase, putative, expressed	chr8	2388732	2392045	+	CDS
3	LOC_Os11g07230	receptor kinase, putative, expressed	gene	receptor kinase, putative, expressed	chr11	3629205	3634565	+	CDS
3	LOC_Os11g03900	glucosamine--fructose-6-phosphate aminotransferase 1, putative, expressed	gene	glucosamine--fructose-6-phosphate aminotransferase 1, putative, expressed	chr11	1553648	1558870	-	CDS,promoter
3	LOC_Os06g40330	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr6	24004102	24011311	-	CDS,three_prime_UTR
3	LOC_Os06g40790	MLO domain containing protein, putative	gene	MLO domain containing protein, putative	chr6	24331456	24337115	-	CDS
3	LOC_Os01g49920	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr1	28668434	28672523	+	CDS,downstream
3	LOC_Os02g55140	leucine aminopeptidase, chloroplast precursor, putative, expressed	gene	leucine aminopeptidase, chloroplast precursor, putative, expressed	chr2	33773389	33776827	-	CDS
3	LOC_Os08g40020	selenium binding protein, putative, expressed	gene	selenium binding protein, putative, expressed	chr8	25341991	25343946	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g37150	syntaxin 6, N-terminal domain containing protein, expressed	gene	syntaxin 6, N-terminal domain containing protein, expressed	chr5	21645695	21649119	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g04750	60S ribosomal protein L21-2, putative, expressed	gene	60S ribosomal protein L21-2, putative, expressed	chr3	2263922	2265926	+	three_prime_UTR,downstream
3	LOC_Os04g01290	proteasome subunit, putative, expressed	gene	proteasome subunit, putative, expressed	chr4	218523	221825	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g26700	UPF0041 domain containing protein, putative, expressed	gene	UPF0041 domain containing protein, putative, expressed	chr7	15420677	15424220	-	CDS,three_prime_UTR
3	LOC_Os01g16530	OsClp1 - Putative Clp protease homologue, expressed	gene	OsClp1 - Putative Clp protease homologue, expressed	chr1	9377840	9382159	-	CDS
3	LOC_Os12g31780	nitrilase-associated protein, putative, expressed	gene	nitrilase-associated protein, putative, expressed	chr12	19093192	19095831	-	CDS,three_prime_UTR,downstream
3	LOC_Os04g57800	BTBN13 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed	gene	BTBN13 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed	chr4	34230818	34235760	-	three_prime_UTR,promoter
3	LOC_Os09g38100	phosphate carrier protein, mitochondrial precursor, putative, expressed	gene	phosphate carrier protein, mitochondrial precursor, putative, expressed	chr9	21948610	21952036	-	CDS
3	LOC_Os09g13820	pollen signalling protein with adenylyl cyclase activity, putative, expressed	gene	pollen signalling protein with adenylyl cyclase activity, putative, expressed	chr9	8117804	8122212	+	CDS
3	LOC_Os02g42230	RPA2B - Putative single-stranded DNA binding complex subunit 2, expressed	gene	RPA2B - Putative single-stranded DNA binding complex subunit 2, expressed	chr2	25398540	25402499	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g20410	expressed protein	gene	expressed protein	chr8	12255995	12258743	-	five_prime_UTR,CDS,promoter
3	LOC_Os05g42250	cyclic nucleotide-gated ion channel 2, putative, expressed	gene	cyclic nucleotide-gated ion channel 2, putative, expressed	chr5	24649388	24654162	+	CDS
3	LOC_Os06g51510	expressed protein	gene	expressed protein	chr6	31207366	31210394	-	CDS,three_prime_UTR
3	LOC_Os06g27770	isoflavone reductase homolog IRL, putative, expressed	gene	isoflavone reductase homolog IRL, putative, expressed	chr6	15723699	15726774	+	CDS
3	LOC_Os02g51180	cullin, putative, expressed	gene	cullin, putative, expressed	chr2	31303885	31306993	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g48310	expressed protein	gene	expressed protein	chr1	27680680	27684641	-	CDS
3	LOC_Os02g55570	shugoshin-1, putative, expressed	gene	shugoshin-1, putative, expressed	chr2	34024960	34028573	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g21510	STE_MEKK_ste11_MAP3K.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast	gene	STE_MEKK_ste11_MAP3K.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast	chr9	13009190	13016006	+	CDS
3	LOC_Os06g49530	OsFBX206 - F-box domain containing protein, expressed	gene	OsFBX206 - F-box domain containing protein, expressed	chr6	29995313	29998225	+	CDS,three_prime_UTR
3	LOC_Os03g63660	expressed protein	gene	expressed protein	chr3	35948415	35953464	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g35420	helicase conserved C-terminal domain containing protein, expressed	gene	helicase conserved C-terminal domain containing protein, expressed	chr4	21375084	21386365	-	CDS
3	LOC_Os01g09560	mitochondrial-processing peptidase subunit alpha, mitochondrial precursor, putative, expressed	gene	mitochondrial-processing peptidase subunit alpha, mitochondrial precursor, putative, expressed	chr1	4890516	4895876	+	CDS
3	LOC_Os12g20410	matrix attachment region binding protein, putative, expressed	gene	matrix attachment region binding protein, putative, expressed	chr12	11912722	11916076	+	CDS,three_prime_UTR
3	LOC_Os07g39690	GCN5-related N-acetyltransferase, putative, expressed	gene	GCN5-related N-acetyltransferase, putative, expressed	chr7	23783963	23790394	-	CDS,three_prime_UTR
3	LOC_Os08g33140	F-box domain containing protein, expressed	gene	F-box domain containing protein, expressed	chr8	20588746	20593883	+	CDS,three_prime_UTR
3	LOC_Os02g21430	AML1, putative, expressed	gene	AML1, putative, expressed	chr2	12720879	12729010	+	CDS
3	LOC_Os03g60890	calmodulin binding protein, putative, expressed	gene	calmodulin binding protein, putative, expressed	chr3	34595422	34598602	-	CDS,three_prime_UTR
3	LOC_Os01g67960	GPI transamidase component PIG-S-related, putative, expressed	gene	GPI transamidase component PIG-S-related, putative, expressed	chr1	39485889	39491056	+	CDS
3	LOC_Os10g33710	expressed protein	gene	expressed protein	chr10	17707275	17722115	+	CDS,three_prime_UTR
3	LOC_Os06g40730	protein with a conserved N-terminal region, putative, expressed	gene	protein with a conserved N-terminal region, putative, expressed	chr6	24276342	24281504	-	CDS,three_prime_UTR
3	LOC_Os01g32280	transmembrane protein, putative, expressed	gene	transmembrane protein, putative, expressed	chr1	17696034	17705330	+	CDS,three_prime_UTR
3	LOC_Os10g25360	signal peptide peptidase domain containing protein, expressed	gene	signal peptide peptidase domain containing protein, expressed	chr10	13041544	13044034	-	CDS,three_prime_UTR
3	LOC_Os01g52490	40S ribosomal protein S24, putative, expressed	gene	40S ribosomal protein S24, putative, expressed	chr1	30156837	30158730	-	three_prime_UTR,promoter
3	LOC_Os02g35010	STE_MEKK_ste11_MAP3K.9 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	gene	STE_MEKK_ste11_MAP3K.9 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	chr2	20996261	21002541	-	CDS
3	LOC_Os07g48270	helicase conserved C-terminal domain containing protein, expressed	gene	helicase conserved C-terminal domain containing protein, expressed	chr7	28831622	28833733	-	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os06g47830	RPA2C - Putative single-stranded DNA binding complex subunit 2, expressed	gene	RPA2C - Putative single-stranded DNA binding complex subunit 2, expressed	chr6	28945881	28949603	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os10g41870	expressed protein	gene	expressed protein	chr10	22459136	22462853	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g42160	OsWAK15 - OsWAK receptor-like protein kinase	gene	OsWAK15 - OsWAK receptor-like protein kinase	chr2	25350877	25354142	-	CDS,promoter
3	LOC_Os01g60280	ATP binding protein, putative, expressed	gene	ATP binding protein, putative, expressed	chr1	34867361	34878406	-	CDS
3	LOC_Os08g05890	MSP domain containing protein, expressed	gene	MSP domain containing protein, expressed	chr8	3170545	3174441	+	CDS
3	LOC_Os02g27110	expressed protein	gene	expressed protein	chr2	15925427	15944630	-	CDS,three_prime_UTR
3	LOC_Os08g10410	expressed protein	gene	expressed protein	chr8	6111380	6114669	-	CDS,three_prime_UTR
3	LOC_Os11g07100	receptor-like protein kinase precursor, putative, expressed	gene	receptor-like protein kinase precursor, putative, expressed	chr11	3531308	3536087	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g10250	hydrolase, alpha/beta fold family domain containing protein, expressed	gene	hydrolase, alpha/beta fold family domain containing protein, expressed	chr1	5388733	5393414	-	CDS,three_prime_UTR
3	LOC_Os01g67290	cyclin-related protein, putative, expressed	gene	cyclin-related protein, putative, expressed	chr1	39051219	39057931	-	CDS,three_prime_UTR
3	LOC_Os06g44060	phospholipase D. Active site motif family protein, expressed	gene	phospholipase D. Active site motif family protein, expressed	chr6	26574128	26578687	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g62380	fasciclin-like arabinogalactan protein, putative, expressed	gene	fasciclin-like arabinogalactan protein, putative, expressed	chr1	36098359	36103250	-	CDS,three_prime_UTR,downstream
3	LOC_Os06g03690	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr6	1454369	1457726	+	CDS,three_prime_UTR
3	LOC_Os09g03690	expressed protein	gene	expressed protein	chr9	1860957	1863446	+	CDS,three_prime_UTR
3	LOC_Os01g59630	exostosin family domain containing protein, expressed	gene	exostosin family domain containing protein, expressed	chr1	34484163	34488768	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g17850	acetyltransferase type B catalytic subunit, putative, expressed	gene	acetyltransferase type B catalytic subunit, putative, expressed	chr9	10921337	10925993	+	CDS,downstream
3	LOC_Os04g58390	allantoinase, putative, expressed	gene	allantoinase, putative, expressed	chr4	34552875	34557611	+	three_prime_UTR,downstream
3	LOC_Os09g26800	polygalacturonase, putative, expressed	gene	polygalacturonase, putative, expressed	chr9	16281794	16286188	+	CDS
3	LOC_Os11g42430	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr11	25070784	25074291	-	three_prime_UTR,promoter
3	LOC_Os03g08830	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr3	4560063	4567649	+	CDS,promoter,downstream
3	LOC_Os06g41990	M16 domain containing zinc peptidase, putative, expressed	gene	M16 domain containing zinc peptidase, putative, expressed	chr6	25199279	25209537	-	CDS
3	LOC_Os09g32300	KH domain-containing protein, putative, expressed	gene	KH domain-containing protein, putative, expressed	chr9	19279445	19285663	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g10650	expressed protein	gene	expressed protein	chr12	5691843	5695260	+	CDS,three_prime_UTR
3	LOC_Os07g43010	expressed protein	gene	expressed protein	chr7	25760790	25764671	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g62170	cyclase/dehydrase family protein, expressed	gene	cyclase/dehydrase family protein, expressed	chr3	35205732	35211139	+	three_prime_UTR,CDS,downstream
3	LOC_Os07g33360	expressed protein	gene	expressed protein	chr7	19937450	19942176	+	CDS,three_prime_UTR
3	LOC_Os01g43090	oxidoreductase, aldo/keto reductase family protein, putative, expressed	gene	oxidoreductase, aldo/keto reductase family protein, putative, expressed	chr1	24578577	24581033	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g52130	coproporphyrinogen III oxidase, chloroplast precursor, putative, expressed	gene	coproporphyrinogen III oxidase, chloroplast precursor, putative, expressed	chr4	30776484	30780383	+	CDS,three_prime_UTR
3	LOC_Os04g40300	transglutaminase, putative, expressed	gene	transglutaminase, putative, expressed	chr4	23774928	23778187	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os10g33440	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr10	17535375	17541930	+	CDS
3	LOC_Os01g29740	expressed protein	gene	expressed protein	chr1	16658708	16663390	+	CDS,three_prime_UTR
3	LOC_Os12g03594	OsFBX437 - F-box domain containing protein, expressed	gene	OsFBX437 - F-box domain containing protein, expressed	chr12	1435996	1444090	+	CDS,three_prime_UTR
3	LOC_Os08g07540	hemimethylated DNA binding domain containing protein, expressed	gene	hemimethylated DNA binding domain containing protein, expressed	chr8	4236013	4241588	+	CDS,three_prime_UTR
3	LOC_Os08g02490	AT hook motif domain containing protein, expressed	gene	AT hook motif domain containing protein, expressed	chr8	1006219	1010067	+	CDS,three_prime_UTR
3	LOC_Os03g55330	ankyrin repeat domain containing protein, putative, expressed	gene	ankyrin repeat domain containing protein, putative, expressed	chr3	31469123	31472947	-	CDS,downstream
3	LOC_Os04g56290	aldose 1-epimerase, putative, expressed	gene	aldose 1-epimerase, putative, expressed	chr4	33372191	33378863	+	three_prime_UTR
3	LOC_Os03g64350	rhodanese-like domain containing protein, putative, expressed	gene	rhodanese-like domain containing protein, putative, expressed	chr3	36369272	36374414	-	CDS
3	LOC_Os02g10780	SPX domain containing protein, putative, expressed	gene	SPX domain containing protein, putative, expressed	chr2	5706636	5709127	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g07740	DEAD-box ATP-dependent RNA helicase 14, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase 14, putative, expressed	chr1	3712687	3717637	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g10740	pollen-specific protein SF21, putative, expressed	gene	pollen-specific protein SF21, putative, expressed	chr5	5913610	5916871	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g61829	haloacid dehalogenase-like hydrolase family protein, putative, expressed	gene	haloacid dehalogenase-like hydrolase family protein, putative, expressed	chr3	35045876	35048273	+	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os01g29820	expressed protein	gene	expressed protein	chr1	16705224	16708579	+	three_prime_UTR
3	LOC_Os07g37640	IKI3 family protein, expressed	gene	IKI3 family protein, expressed	chr7	22564764	22570610	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g41570	expressed protein	gene	expressed protein	chr7	24909356	24915539	+	CDS,three_prime_UTR
3	LOC_Os09g25600	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr9	15363890	15368756	+	CDS,promoter
3	LOC_Os03g14520	nucleotide-sensitive chloride conductance regulator containing protein, expressed	gene	nucleotide-sensitive chloride conductance regulator containing protein, expressed	chr3	7880178	7883272	+	CDS,three_prime_UTR
3	LOC_Os03g18690	26S protease regulatory subunit 4, putative, expressed	gene	26S protease regulatory subunit 4, putative, expressed	chr3	10461368	10465165	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g31830	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr10	16621978	16626288	-	three_prime_UTR,CDS,promoter
3	LOC_Os01g07400	WD40-like domain containing protein, putative, expressed	gene	WD40-like domain containing protein, putative, expressed	chr1	3504665	3509531	+	CDS,promoter
3	LOC_Os07g12810	expressed protein	gene	expressed protein	chr7	7323266	7328322	-	CDS,promoter
3	LOC_Os07g07780	hypothetical protein	gene	hypothetical protein	chr7	3902510	3908280	-	CDS,promoter
3	LOC_Os01g16260	major facilitator superfamily antiporter, putative, expressed	gene	major facilitator superfamily antiporter, putative, expressed	chr1	9202963	9210788	-	CDS,three_prime_UTR
3	LOC_Os05g35520	deoxynucleoside kinase family, putative, expressed	gene	deoxynucleoside kinase family, putative, expressed	chr5	21050026	21054839	+	CDS,three_prime_UTR
3	LOC_Os01g73000	copine, putative, expressed	gene	copine, putative, expressed	chr1	42349883	42354354	-	CDS,three_prime_UTR
3	LOC_Os02g10970	peptidyl-prolyl cis-trans isomerase, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, putative, expressed	chr2	5826295	5834386	+	CDS,three_prime_UTR
3	LOC_Os04g35600	OsPDIL1-2  protein disulfide isomerase PDIL1-2, expressed	gene	OsPDIL1-2  protein disulfide isomerase PDIL1-2, expressed	chr4	21527973	21531044	-	CDS,downstream
3	LOC_Os03g49630	expressed protein	gene	expressed protein	chr3	28253635	28259533	-	CDS
3	LOC_Os02g20160	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr2	11876332	11879827	+	three_prime_UTR,downstream
3	LOC_Os04g06850	expressed protein	gene	expressed protein	chr4	3604648	3609254	-	CDS
3	LOC_Os01g34780	protein binding protein, putative, expressed	gene	protein binding protein, putative, expressed	chr1	19176691	19184701	-	CDS,three_prime_UTR
3	LOC_Os04g23630	expressed protein	gene	expressed protein	chr4	13516654	13521752	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g51680	fanconi anemia L, putative, expressed	gene	fanconi anemia L, putative, expressed	chr3	29586006	29588839	-	CDS
3	LOC_Os05g43252	expressed protein	gene	expressed protein	chr5	25101733	25106715	+	five_prime_UTR,promoter
3	LOC_Os08g09370	polyprenyl synthetase, putative, expressed	gene	polyprenyl synthetase, putative, expressed	chr8	5434585	5438966	+	CDS,three_prime_UTR
3	LOC_Os02g30530	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr2	18157100	18160997	-	three_prime_UTR
3	LOC_Os05g07632	haloacid dehalogenase-like hydrolase family protein, putative, expressed	gene	haloacid dehalogenase-like hydrolase family protein, putative, expressed	chr5	4096740	4100709	-	CDS,three_prime_UTR
3	LOC_Os12g36950	CTP synthase, putative, expressed	gene	CTP synthase, putative, expressed	chr12	22622813	22629039	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g29730	expressed protein	gene	expressed protein	chr3	16936454	16939793	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g04800	ATPase BadF/BadG/BcrA/BcrD type, putative, expressed	gene	ATPase BadF/BadG/BcrA/BcrD type, putative, expressed	chr9	2555987	2560147	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g07040	CAMK_CAMK_like.43 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.43 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr11	3491121	3495877	-	CDS,three_prime_UTR
3	LOC_Os01g52920	expressed protein	gene	expressed protein	chr1	30425885	30431042	+	CDS,three_prime_UTR
3	LOC_Os09g14520	integral membrane protein, putative, expressed	gene	integral membrane protein, putative, expressed	chr9	8589517	8591971	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g68070	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr1	39576005	39579143	+	three_prime_UTR,downstream
3	LOC_Os01g09800	BTBA1 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed	gene	BTBA1 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed	chr1	5059416	5064236	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g58630	hypothetical protein	gene	hypothetical protein	chr2	35828589	35829224	-	CDS,promoter
3	LOC_Os06g29810	lectin protein kinase family protein, putative, expressed	gene	lectin protein kinase family protein, putative, expressed	chr6	17159333	17163868	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g43430	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr4	25516936	25522368	-	CDS,three_prime_UTR,downstream
3	LOC_Os06g08910	glutamate receptor 2.8 precursor, putative, expressed	gene	glutamate receptor 2.8 precursor, putative, expressed	chr6	4488430	4492931	-	CDS,three_prime_UTR
3	LOC_Os01g01410	TKL_IRAK_C-LEC.1 - TKL_IRAK_C-LEC has homology to C-type lectin receptors, expressed	gene	TKL_IRAK_C-LEC.1 - TKL_IRAK_C-LEC has homology to C-type lectin receptors, expressed	chr1	204710	208606	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g02830	SNF7 domain containing protein, putative, expressed	gene	SNF7 domain containing protein, putative, expressed	chr12	1011300	1015842	-	CDS
3	LOC_Os10g11260	ubiquitin-conjugating enzyme, putative, expressed	gene	ubiquitin-conjugating enzyme, putative, expressed	chr10	6260157	6266465	+	CDS
3	LOC_Os06g07490	HIRAN domain containing protein, putative, expressed	gene	HIRAN domain containing protein, putative, expressed	chr6	3597465	3604189	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g08790	targeting protein for Xklp2, putative, expressed	gene	targeting protein for Xklp2, putative, expressed	chr7	4529615	4535784	+	CDS,three_prime_UTR
3	LOC_Os03g06120	PLAC8 family protein, expressed	gene	PLAC8 family protein, expressed	chr3	3067965	3073187	+	CDS
3	LOC_Os03g60820	transporter, major facilitator superfamily domain containing protein, expressed	gene	transporter, major facilitator superfamily domain containing protein, expressed	chr3	34547512	34553694	-	CDS
3	LOC_Os07g11060	expressed protein	gene	expressed protein	chr7	6107035	6114548	-	CDS,three_prime_UTR
3	LOC_Os11g12310	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr11	6869705	6871273	-	CDS,promoter,downstream
3	LOC_Os06g27800	tm-1GCR237 protein, putative, expressed	gene	tm-1GCR237 protein, putative, expressed	chr6	15737387	15743848	+	CDS,promoter
3	LOC_Os04g51440	villin protein, putative, expressed	gene	villin protein, putative, expressed	chr4	30278742	30287878	-	CDS,promoter
3	LOC_Os02g02320	OsSCP6 - Putative Serine Carboxypeptidase homologue, expressed	gene	OsSCP6 - Putative Serine Carboxypeptidase homologue, expressed	chr2	767270	772138	-	CDS
3	LOC_Os07g46810	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr7	27978902	27981913	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os12g32499	expressed protein	gene	expressed protein	chr12	19583773	19594407	+	five_prime_UTR,CDS
3	LOC_Os08g10290	SHR5-receptor-like kinase, putative, expressed	gene	SHR5-receptor-like kinase, putative, expressed	chr8	5979931	5987966	+	CDS
3	LOC_Os07g23494	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	13275221	13282671	-	CDS
3	LOC_Os04g52310	metal cation transporter, putative, expressed	gene	metal cation transporter, putative, expressed	chr4	30893089	30895447	-	five_prime_UTR,CDS,downstream
3	LOC_Os04g42770	expressed protein	gene	expressed protein	chr4	25129133	25135446	-	CDS
3	LOC_Os09g06634	transposon protein, putative, Pong sub-class, expressed	gene	transposon protein, putative, Pong sub-class, expressed	chr9	3140878	3146421	+	CDS,three_prime_UTR
3	LOC_Os01g50860	chloride transporter, chloride channel family, putative, expressed	gene	chloride transporter, chloride channel family, putative, expressed	chr1	29215854	29220762	+	CDS
3	LOC_Os06g10770	peptidase, putative, expressed	gene	peptidase, putative, expressed	chr6	5620927	5624702	+	CDS,three_prime_UTR,promoter
3	LOC_Os07g05550	expressed protein	gene	expressed protein	chr7	2594720	2598061	-	five_prime_UTR,CDS,downstream
3	LOC_Os05g32850	CBS domain containing protein, expressed	gene	CBS domain containing protein, expressed	chr5	19170330	19177914	+	CDS,three_prime_UTR
3	LOC_Os01g69940	OsFBX32 - F-box domain containing protein, expressed	gene	OsFBX32 - F-box domain containing protein, expressed	chr1	40441785	40445380	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g66150	expressed protein	gene	expressed protein	chr1	38430243	38432627	-	CDS,three_prime_UTR
3	LOC_Os01g54950	expressed protein	gene	expressed protein	chr1	31604243	31606618	-	CDS,promoter,downstream
3	LOC_Os10g10280	hypothetical protein	gene	hypothetical protein	chr10	5664325	5667706	-	CDS,promoter
3	LOC_Os07g38430	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr7	23090897	23093467	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g43800	methyltransferase domain containing protein, putative, expressed	gene	methyltransferase domain containing protein, putative, expressed	chr6	26374959	26378230	-	CDS,three_prime_UTR
3	LOC_Os02g43860	amino acid permease, putative, expressed	gene	amino acid permease, putative, expressed	chr2	26481468	26485466	+	three_prime_UTR,CDS
3	LOC_Os10g36470	peptidase, M24 family protein, putative, expressed	gene	peptidase, M24 family protein, putative, expressed	chr10	19441087	19445347	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g51166	expressed protein	gene	expressed protein	chr4	30109656	30112292	-	CDS,three_prime_UTR
3	LOC_Os03g03530	expressed protein	gene	expressed protein	chr3	1524176	1526100	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g01290	expressed protein	gene	expressed protein	chr2	163311	164372	-	three_prime_UTR,promoter
3	LOC_Os11g06670	expressed protein	gene	expressed protein	chr11	3242420	3245833	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g20140	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr3	11372057	11375428	+	CDS,downstream
3	LOC_Os05g33240	DNA-directed RNA polymerase II subunit RPB7, putative, expressed	gene	DNA-directed RNA polymerase II subunit RPB7, putative, expressed	chr5	19425838	19428076	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g42550	expressed protein	gene	expressed protein	chr2	25573586	25576230	-	three_prime_UTR,promoter
3	LOC_Os06g09930	G protein coupled receptor, putative, expressed	gene	G protein coupled receptor, putative, expressed	chr6	5059661	5064028	+	CDS,three_prime_UTR
3	LOC_Os04g30930	NB-ARC domain containing protein	gene	NB-ARC domain containing protein	chr4	18318398	18322204	+	CDS,downstream
3	LOC_Os12g26480	expressed protein	gene	expressed protein	chr12	15470180	15472654	-	three_prime_UTR
3	LOC_Os07g07880	trp repressor/replication initiator, putative, expressed	gene	trp repressor/replication initiator, putative, expressed	chr7	3951982	3953895	-	three_prime_UTR,promoter
3	LOC_Os03g27760	nodulation protein-related, putative, expressed	gene	nodulation protein-related, putative, expressed	chr3	15906678	15910869	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g54880	glucosidase 2 subunit beta precursor, putative, expressed	gene	glucosidase 2 subunit beta precursor, putative, expressed	chr1	31560341	31563122	-	CDS,three_prime_UTR
3	LOC_Os06g37180	ATP synthase, putative, expressed	gene	ATP synthase, putative, expressed	chr6	21962110	21967779	-	CDS,three_prime_UTR
3	LOC_Os09g01610	clumping factor B, putative, expressed	gene	clumping factor B, putative, expressed	chr9	428695	431329	-	three_prime_UTR
3	LOC_Os12g04860	DTW domain containing protein, putative, expressed	gene	DTW domain containing protein, putative, expressed	chr12	2086514	2089629	-	three_prime_UTR
3	LOC_Os03g41200	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr3	22909826	22917028	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os01g40610	coiled-coil domain-containing protein, putative, expressed	gene	coiled-coil domain-containing protein, putative, expressed	chr1	22930883	22936228	+	CDS
3	LOC_Os08g23440	amino acid permease family protein, putative, expressed	gene	amino acid permease family protein, putative, expressed	chr8	14183430	14192706	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g63020	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr3	35626415	35631587	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g51610	CRAL/TRIO domain containing protein, expressed	gene	CRAL/TRIO domain containing protein, expressed	chr2	31598599	31602284	-	CDS,three_prime_UTR
3	LOC_Os05g38360	DHHC zinc finger domain containing protein, expressed	gene	DHHC zinc finger domain containing protein, expressed	chr5	22425975	22429637	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g46610	PAP fibrillin family domain containing protein, expressed	gene	PAP fibrillin family domain containing protein, expressed	chr4	27448040	27452770	-	three_prime_UTR
3	LOC_Os01g20860	phospholipase D. Active site motif family protein, expressed	gene	phospholipase D. Active site motif family protein, expressed	chr1	11624632	11636050	-	CDS,promoter
3	LOC_Os03g17310	calcium-transporting ATPase, endoplasmic reticulum-type, putative, expressed	gene	calcium-transporting ATPase, endoplasmic reticulum-type, putative, expressed	chr3	9631581	9641029	-	CDS,three_prime_UTR
3	LOC_Os01g53150	GTPase of unknown function domain containing protein, putative, expressed	gene	GTPase of unknown function domain containing protein, putative, expressed	chr1	30536091	30540827	+	CDS,three_prime_UTR,promoter
3	LOC_Os04g43916	expressed protein	gene	expressed protein	chr4	25838811	25850367	-	CDS,three_prime_UTR,downstream
3	LOC_Os06g49640	uncharacterized UPF0114 domain containing protein, expressed	gene	uncharacterized UPF0114 domain containing protein, expressed	chr6	30033714	30036744	-	three_prime_UTR,promoter
3	LOC_Os03g11020	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr3	5668923	5671004	+	three_prime_UTR,downstream
3	LOC_Os01g04190	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr1	1842814	1848186	+	CDS,three_prime_UTR
3	LOC_Os05g03820	glutamate--cysteine ligase, chloroplast precursor, putative, expressed	gene	glutamate--cysteine ligase, chloroplast precursor, putative, expressed	chr5	1698490	1703144	+	CDS
3	LOC_Os04g38330	radical SAM enzyme, putative, expressed	gene	radical SAM enzyme, putative, expressed	chr4	22617178	22620903	-	CDS,three_prime_UTR,downstream
3	LOC_Os02g38780	protein phosphatase 2C containing protein, expressed	gene	protein phosphatase 2C containing protein, expressed	chr2	23426671	23436844	+	CDS,three_prime_UTR,five_prime_UTR
3	LOC_Os10g17740	ZOS10-02 - C2H2 zinc finger protein, expressed	gene	ZOS10-02 - C2H2 zinc finger protein, expressed	chr10	8909113	8913878	+	CDS,three_prime_UTR
3	LOC_Os08g37650	expressed protein	gene	expressed protein	chr8	23847647	23850206	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os03g06980	nucleic acid binding protein, putative, expressed	gene	nucleic acid binding protein, putative, expressed	chr3	3560497	3564361	-	CDS,three_prime_UTR
3	LOC_Os03g15120	imidazole glycerol phosphate synthase hisHF, chloroplast precursor, putative, expressed	gene	imidazole glycerol phosphate synthase hisHF, chloroplast precursor, putative, expressed	chr3	8254371	8259749	-	CDS,three_prime_UTR
3	LOC_Os05g48150	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr5	27539769	27542855	+	three_prime_UTR,CDS,downstream
3	LOC_Os12g17830	expressed protein	gene	expressed protein	chr12	10205269	10208580	-	CDS,three_prime_UTR
3	LOC_Os10g13880	hypothetical protein	gene	hypothetical protein	chr10	7559547	7560561	-	CDS,promoter
3	LOC_Os09g34190	acyl-coenzyme A thioesterase 10, mitochondrial precursor, putative, expressed	gene	acyl-coenzyme A thioesterase 10, mitochondrial precursor, putative, expressed	chr9	20182786	20185826	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g39780	AMP-binding enzyme family protein, expressed	gene	AMP-binding enzyme family protein, expressed	chr4	23513519	23522205	-	CDS
3	LOC_Os10g04750	OsFBX362 - F-box domain containing protein	gene	OsFBX362 - F-box domain containing protein	chr10	2277527	2278421	-	CDS,promoter
3	LOC_Os04g57140	kinesin motor domain containing protein, putative, expressed	gene	kinesin motor domain containing protein, putative, expressed	chr4	33854860	33865092	-	CDS,three_prime_UTR
3	LOC_Os10g39930	cytochrome P450 97B2, putative, expressed	gene	cytochrome P450 97B2, putative, expressed	chr10	21296862	21301841	+	CDS
3	LOC_Os08g43560	OsAPx4 - Peroxisomal Ascorbate Peroxidase encoding gene 5,8,9, expressed	gene	OsAPx4 - Peroxisomal Ascorbate Peroxidase encoding gene 5,8,9, expressed	chr8	27552307	27556656	-	CDS,three_prime_UTR
3	LOC_Os08g01180	nicalin, putative, expressed	gene	nicalin, putative, expressed	chr8	114025	120121	-	CDS
3	LOC_Os04g57510	exostosin family domain containing protein, expressed	gene	exostosin family domain containing protein, expressed	chr4	34024548	34029696	-	CDS,three_prime_UTR
3	LOC_Os03g49770	oxysterol-binding protein, putative, expressed	gene	oxysterol-binding protein, putative, expressed	chr3	28323005	28332233	+	CDS
3	LOC_Os03g18520	glucan endo-1,3-beta-glucosidase 9 precursor, putative, expressed	gene	glucan endo-1,3-beta-glucosidase 9 precursor, putative, expressed	chr3	10375601	10378450	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g49026	transmembrane protein 93, putative, expressed	gene	transmembrane protein 93, putative, expressed	chr1	28172783	28175074	+	three_prime_UTR,CDS
3	LOC_Os03g22430	OsClp5 - Putative Clp protease homologue, expressed	gene	OsClp5 - Putative Clp protease homologue, expressed	chr3	12852837	12858087	-	CDS,three_prime_UTR
3	LOC_Os02g47010	secretory carrier-associated membrane protein, putative, expressed	gene	secretory carrier-associated membrane protein, putative, expressed	chr2	28690809	28694982	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g42760	zinc finger protein-related, putative, expressed	gene	zinc finger protein-related, putative, expressed	chr3	23810739	23814756	+	CDS,downstream
3	LOC_Os03g44900	CCR4-NOT transcription factor, putative, expressed	gene	CCR4-NOT transcription factor, putative, expressed	chr3	25332358	25343086	+	CDS
3	LOC_Os05g51790	RecF/RecN/SMC N terminal domain containing protein, expressed	gene	RecF/RecN/SMC N terminal domain containing protein, expressed	chr5	29665510	29678175	-	CDS,three_prime_UTR
3	LOC_Os12g27520	serine/threonine-protein kinase AFC2, putative, expressed	gene	serine/threonine-protein kinase AFC2, putative, expressed	chr12	16193413	16196784	-	three_prime_UTR,CDS
3	LOC_Os01g44990	ercc6 protein, putative, expressed	gene	ercc6 protein, putative, expressed	chr1	25523140	25529636	-	CDS
3	LOC_Os04g44810	syntaxin-18, putative, expressed	gene	syntaxin-18, putative, expressed	chr4	26343352	26346583	+	CDS,downstream
3	LOC_Os07g45970	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr7	27427442	27437680	+	CDS
3	LOC_Os08g17600	SNARE domain containing protein, putative, expressed	gene	SNARE domain containing protein, putative, expressed	chr8	10758598	10762670	+	CDS
3	LOC_Os04g50730	RWD domain containing protein, expressed	gene	RWD domain containing protein, expressed	chr4	29826986	29831282	+	three_prime_UTR,promoter
3	LOC_Os01g42650	cytochrome c oxidase subunit 5B, mitochondrial precursor, putative, expressed	gene	cytochrome c oxidase subunit 5B, mitochondrial precursor, putative, expressed	chr1	24254255	24258914	+	CDS,three_prime_UTR
3	LOC_Os09g19850	chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed	gene	chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed	chr9	11879514	11884134	+	CDS,three_prime_UTR
3	LOC_Os05g31480	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr5	18252895	18257926	-	CDS,three_prime_UTR,downstream
3	LOC_Os06g12580	pro-resilin precursor, putative, expressed	gene	pro-resilin precursor, putative, expressed	chr6	6815403	6818862	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g50370	helicase domain-containing protein, putative, expressed	gene	helicase domain-containing protein, putative, expressed	chr2	30750806	30756899	+	CDS,three_prime_UTR
3	LOC_Os01g01115	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr1	57658	60090	+	CDS
3	LOC_Os03g14890	AGAP008572-PA, putative, expressed	gene	AGAP008572-PA, putative, expressed	chr3	8110928	8116680	-	CDS,three_prime_UTR
3	LOC_Os08g40190	expressed protein	gene	expressed protein	chr8	25431686	25433620	+	CDS,three_prime_UTR
3	LOC_Os02g07210	OTU-like cysteine protease family protein, putative, expressed	gene	OTU-like cysteine protease family protein, putative, expressed	chr2	3705883	3709901	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g55840	expressed protein	gene	expressed protein	chr2	34176216	34178771	+	three_prime_UTR
3	LOC_Os02g06270	phytosulfokine receptor precursor, putative, expressed	gene	phytosulfokine receptor precursor, putative, expressed	chr2	3132773	3134983	-	CDS,downstream
3	LOC_Os05g44020	acetyltransferase, GNAT family, putative, expressed	gene	acetyltransferase, GNAT family, putative, expressed	chr5	25545713	25548432	+	three_prime_UTR,CDS
3	LOC_Os01g42470	acetyltransferase, GNAT family, putative, expressed	gene	acetyltransferase, GNAT family, putative, expressed	chr1	24144799	24147959	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g08220	lipoxygenase protein, putative, expressed	gene	lipoxygenase protein, putative, expressed	chr3	4186109	4192541	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g32250	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr2	19038905	19045009	-	three_prime_UTR
3	LOC_Os06g23160	bacterial transferase hexapeptide domain containing protein, expressed	gene	bacterial transferase hexapeptide domain containing protein, expressed	chr6	13513668	13520730	-	CDS,three_prime_UTR
3	LOC_Os01g40050	peptidyl-prolyl cis-trans isomerase, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, putative, expressed	chr1	22590305	22595120	-	CDS,three_prime_UTR
3	LOC_Os03g59540	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr3	33884841	33887484	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g20410	GTP binding protein, putative, expressed	gene	GTP binding protein, putative, expressed	chr2	12023801	12034637	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g46840	expressed protein	gene	expressed protein	chr1	26716790	26721402	+	CDS,three_prime_UTR
3	LOC_Os11g08300	aldehyde dehydrogenase, putative, expressed	gene	aldehyde dehydrogenase, putative, expressed	chr11	4371183	4375946	+	CDS,three_prime_UTR
3	LOC_Os06g19980	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr6	11452024	11460167	+	CDS,downstream
3	LOC_Os06g14324	caleosin related protein, putative, expressed	gene	caleosin related protein, putative, expressed	chr6	7982956	7989959	-	five_prime_UTR,CDS
3	LOC_Os04g28020	expressed protein	gene	expressed protein	chr4	16376340	16378909	+	CDS,promoter
3	LOC_Os01g49060	prenyltransferase, putative, expressed	gene	prenyltransferase, putative, expressed	chr1	28186809	28192314	+	CDS
3	LOC_Os01g50770	adaptor complexes medium subunit family domain containing protein, expressed	gene	adaptor complexes medium subunit family domain containing protein, expressed	chr1	29165374	29169366	+	CDS,three_prime_UTR
3	LOC_Os05g49160	expressed protein	gene	expressed protein	chr5	28142812	28146007	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g41080	histone H3, putative, expressed	gene	histone H3, putative, expressed	chr5	24005114	24007613	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os09g09470	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr9	5093691	5101650	+	CDS
3	LOC_Os07g05620	CAMK_KIN1/SNF1/Nim1_like.28 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_KIN1/SNF1/Nim1_like.28 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr7	2642541	2646874	-	CDS
3	LOC_Os03g43850	recA protein, putative, expressed	gene	recA protein, putative, expressed	chr3	24589469	24594548	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g43850	OsFBT9 - F-box and tubby domain containing protein, expressed	gene	OsFBT9 - F-box and tubby domain containing protein, expressed	chr5	25434715	25439077	+	CDS
3	LOC_Os04g51350	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr4	30224982	30228082	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g01540	DNA binding protein, putative, expressed	gene	DNA binding protein, putative, expressed	chr3	343305	346002	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g24294	OsWAK35d - OsWAK short gene, expressed	gene	OsWAK35d - OsWAK short gene, expressed	chr4	13909271	13916746	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os05g40420	2,3-bisphosphoglycerate-independent phosphoglycerate mutase, putative, expressed	gene	2,3-bisphosphoglycerate-independent phosphoglycerate mutase, putative, expressed	chr5	23686098	23690829	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g41890	phytosulfokine receptor precursor, putative, expressed	gene	phytosulfokine receptor precursor, putative, expressed	chr2	25170221	25173832	-	CDS,three_prime_UTR
3	LOC_Os11g41560	OsFBX427 - F-box domain containing protein, expressed	gene	OsFBX427 - F-box domain containing protein, expressed	chr11	24466381	24469061	+	CDS
3	LOC_Os06g40609	expressed protein	gene	expressed protein	chr6	24214335	24216190	+	three_prime_UTR,downstream
3	LOC_Os05g31160	peptide chain release factor 2, putative, expressed	gene	peptide chain release factor 2, putative, expressed	chr5	18065819	18069147	+	CDS,three_prime_UTR
3	LOC_Os03g59240	carboxyl-terminal peptidase, putative, expressed	gene	carboxyl-terminal peptidase, putative, expressed	chr3	33724274	33728078	+	three_prime_UTR,downstream
3	LOC_Os10g20090	CSLH1 - cellulose synthase-like family H, expressed	gene	CSLH1 - cellulose synthase-like family H, expressed	chr10	10018271	10023880	+	CDS,three_prime_UTR
3	LOC_Os03g22770	CCT/B-box zinc finger protein, putative, expressed	gene	CCT/B-box zinc finger protein, putative, expressed	chr3	13151678	13154262	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g46200	beta-galactosidase 8 precursor, putative, expressed	gene	beta-galactosidase 8 precursor, putative, expressed	chr5	26731727	26738863	-	CDS,three_prime_UTR
3	LOC_Os01g57340	rp1, putative, expressed	gene	rp1, putative, expressed	chr1	33140083	33144565	+	CDS,promoter,downstream
3	LOC_Os02g56570	TBC domain containing protein, expressed	gene	TBC domain containing protein, expressed	chr2	34648329	34652994	+	CDS,three_prime_UTR,promoter
3	LOC_Os06g06790	OsPDIL1-5  protein disulfide isomerase PDIL1-5, expressed	gene	OsPDIL1-5  protein disulfide isomerase PDIL1-5, expressed	chr6	3198338	3202980	+	CDS,three_prime_UTR
3	LOC_Os03g11720	glycosyl hydrolase, family 31, putative, expressed	gene	glycosyl hydrolase, family 31, putative, expressed	chr3	6126094	6130155	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g21650	prefoldin, putative, expressed	gene	prefoldin, putative, expressed	chr2	12859786	12864032	+	CDS
3	LOC_Os01g52214	ubiquinone oxidoreductase, putative, expressed	gene	ubiquinone oxidoreductase, putative, expressed	chr1	30019872	30022767	-	CDS,three_prime_UTR
3	LOC_Os12g31480	GPI mannosyltransferase 2, putative, expressed	gene	GPI mannosyltransferase 2, putative, expressed	chr12	18904325	18907561	+	CDS,promoter
3	LOC_Os03g58840	vesicle-associated membrane protein, putative, expressed	gene	vesicle-associated membrane protein, putative, expressed	chr3	33499951	33503242	+	CDS,three_prime_UTR
3	LOC_Os01g16970	glucosidase II beta subunit-like domain containing protein, expressed	gene	glucosidase II beta subunit-like domain containing protein, expressed	chr1	9701710	9708672	-	CDS,three_prime_UTR
3	LOC_Os06g07760	sulfiredoxin-1, putative, expressed	gene	sulfiredoxin-1, putative, expressed	chr6	3758826	3761186	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g41750	expressed protein	gene	expressed protein	chr1	23630721	23634331	-	CDS
3	LOC_Os03g06920	DRD1, putative, expressed	gene	DRD1, putative, expressed	chr3	3504563	3511879	+	CDS
3	LOC_Os02g19890	stripe rust resistance protein Yr10, putative, expressed	gene	stripe rust resistance protein Yr10, putative, expressed	chr2	11701933	11708391	-	CDS,three_prime_UTR
3	LOC_Os04g40530	methyltransferase domain containing protein, expressed	gene	methyltransferase domain containing protein, expressed	chr4	23888196	23889590	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g29560	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr10	15289332	15297862	+	CDS
3	LOC_Os02g51330	MAG2, putative, expressed	gene	MAG2, putative, expressed	chr2	31426723	31432165	-	CDS
3	LOC_Os01g25370	SUMO protease, putative, expressed	gene	SUMO protease, putative, expressed	chr1	14327596	14332258	-	CDS,three_prime_UTR
3	LOC_Os06g06350	AMP-binding enzyme, putative, expressed	gene	AMP-binding enzyme, putative, expressed	chr6	2948765	2956843	+	CDS,three_prime_UTR
3	LOC_Os04g35100	phospholipase C, putative, expressed	gene	phospholipase C, putative, expressed	chr4	21160271	21163587	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g61980	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr3	35124354	35127534	+	CDS,downstream
3	LOC_Os11g38000	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr11	22067724	22073969	+	three_prime_UTR
3	LOC_Os06g07070	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	gene	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	chr6	3359525	3362524	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g21950	fumarate hydratase, mitochondrial precursor, putative, expressed	gene	fumarate hydratase, mitochondrial precursor, putative, expressed	chr3	12544698	12550916	-	CDS,three_prime_UTR
3	LOC_Os03g02820	expressed protein	gene	expressed protein	chr3	1098327	1101867	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g06440	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr6	3000106	3008251	-	CDS,three_prime_UTR
3	LOC_Os03g09310	frigida, putative, expressed	gene	frigida, putative, expressed	chr3	4861185	4865741	-	CDS,three_prime_UTR
3	LOC_Os02g43760	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	gene	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	chr2	26398988	26403644	+	CDS
3	LOC_Os05g30970	copine, putative, expressed	gene	copine, putative, expressed	chr5	17922768	17929397	+	CDS
3	LOC_Os02g53320	universal stress protein domain containing protein, putative, expressed	gene	universal stress protein domain containing protein, putative, expressed	chr2	32637656	32638974	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g04930	expressed protein	gene	expressed protein	chr3	2374210	2377038	-	CDS,promoter
3	LOC_Os12g09590	leafbladeless1, putative, expressed	gene	leafbladeless1, putative, expressed	chr12	5044123	5049544	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g38540	expressed protein	gene	expressed protein	chr12	23630644	23633067	+	CDS
3	LOC_Os04g38480	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	gene	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	chr4	22682151	22687395	-	CDS,three_prime_UTR
3	LOC_Os05g05480	OsDegp6 - Putative Deg protease homologue, expressed	gene	OsDegp6 - Putative Deg protease homologue, expressed	chr5	2725671	2733729	+	CDS,three_prime_UTR
3	LOC_Os02g35144	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr2	21098766	21102188	-	CDS,three_prime_UTR
3	LOC_Os10g26570	phosphofructokinase, putative, expressed	gene	phosphofructokinase, putative, expressed	chr10	13777741	13782253	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g45350	dnaJ domain containing protein, expressed	gene	dnaJ domain containing protein, expressed	chr5	26248223	26251536	-	CDS,three_prime_UTR
3	LOC_Os05g46560	RAN GTPase-activating protein 1, putative, expressed	gene	RAN GTPase-activating protein 1, putative, expressed	chr5	26895864	26898860	+	CDS,three_prime_UTR
3	LOC_Os12g29550	expressed protein	gene	expressed protein	chr12	17606331	17612545	+	CDS
3	LOC_Os04g56646	MEE34, putative, expressed	gene	MEE34, putative, expressed	chr4	33592348	33596015	+	CDS,three_prime_UTR
3	LOC_Os03g47740	homeodomain protein, putative, expressed	gene	homeodomain protein, putative, expressed	chr3	27050084	27056737	-	CDS
3	LOC_Os06g45060	expressed protein	gene	expressed protein	chr6	27260297	27261597	-	three_prime_UTR,promoter
3	LOC_Os04g57160	flavonol synthase/flavanone 3-hydroxylase, putative, expressed	gene	flavonol synthase/flavanone 3-hydroxylase, putative, expressed	chr4	33874932	33878366	+	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os06g37059	unknown	gene	unknown	chr6	21878210	21878678	+	CDS,promoter
3	LOC_Os12g13824	expressed protein	gene	expressed protein	chr12	7817357	7822495	-	CDS,three_prime_UTR
3	LOC_Os11g14130	mTERF family protein, expressed	gene	mTERF family protein, expressed	chr11	7865030	7867735	+	three_prime_UTR,downstream
3	LOC_Os04g40180	expressed protein	gene	expressed protein	chr4	23727743	23730074	+	CDS,three_prime_UTR
3	LOC_Os08g23360	signal recognition particle 68 kDa protein, putative, expressed	gene	signal recognition particle 68 kDa protein, putative, expressed	chr8	14103393	14115037	-	CDS
3	LOC_Os06g03790	39S ribosomal protein L47, mitochondrial precursor, putative, expressed	gene	39S ribosomal protein L47, mitochondrial precursor, putative, expressed	chr6	1511796	1515435	+	CDS,three_prime_UTR,promoter
3	LOC_Os06g37070	expressed protein	gene	expressed protein	chr6	21882015	21883998	+	CDS,downstream
3	LOC_Os05g40770	leucine-rich repeat family protein, putative, expressed	gene	leucine-rich repeat family protein, putative, expressed	chr5	23836849	23842991	-	five_prime_UTR,CDS
3	LOC_Os02g08300	RAD23 DNA repair protein, putative, expressed	gene	RAD23 DNA repair protein, putative, expressed	chr2	4407943	4412802	+	CDS,three_prime_UTR
3	LOC_Os01g43910	CGMC_MAPKCMGC_2.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	gene	CGMC_MAPKCMGC_2.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	chr1	25151058	25157335	-	CDS
3	LOC_Os01g62800	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr1	36367184	36372916	-	CDS
3	LOC_Os03g27800	paramyosin, putative, expressed	gene	paramyosin, putative, expressed	chr3	15937783	15942080	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g40650	copine-1, putative, expressed	gene	copine-1, putative, expressed	chr6	24228311	24233798	-	CDS,three_prime_UTR
3	LOC_Os09g34150	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr9	20157219	20161527	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g27360	aspartic proteinase-like protein 2 precursor, putative, expressed	gene	aspartic proteinase-like protein 2 precursor, putative, expressed	chr2	16109027	16114570	-	CDS
3	LOC_Os05g04914	expressed protein	gene	expressed protein	chr5	2363717	2371798	-	CDS
3	LOC_Os07g13270	SNF7 domain containing protein, putative, expressed	gene	SNF7 domain containing protein, putative, expressed	chr7	7620492	7625721	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g47830	SNF2 family N-terminal domain containing protein, expressed	gene	SNF2 family N-terminal domain containing protein, expressed	chr4	28194525	28201706	+	CDS,downstream
3	LOC_Os10g33940	auxin response factor 18, putative, expressed	gene	auxin response factor 18, putative, expressed	chr10	17980631	17985684	+	CDS,three_prime_UTR
3	LOC_Os01g58750	expressed protein	gene	expressed protein	chr1	33955710	33959058	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g19760	HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed	gene	HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed	chr3	11103338	11121165	+	CDS,three_prime_UTR
3	LOC_Os10g04342	stripe rust resistance protein Yr10, putative, expressed	gene	stripe rust resistance protein Yr10, putative, expressed	chr10	2043019	2056536	+	CDS,three_prime_UTR
3	LOC_Os01g12830	erythronate-4-phosphate dehydrogenase domain containing protein, expressed	gene	erythronate-4-phosphate dehydrogenase domain containing protein, expressed	chr1	7099013	7102266	-	CDS,three_prime_UTR,downstream
3	LOC_Os11g34210	aspartyl/glutamyl-tRNA amidotransferase subunit B, putative, expressed	gene	aspartyl/glutamyl-tRNA amidotransferase subunit B, putative, expressed	chr11	19563840	19568598	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g40980	Divergent PAP2 family domain containing protein, expressed	gene	Divergent PAP2 family domain containing protein, expressed	chr4	24136236	24140607	+	CDS,three_prime_UTR
3	LOC_Os03g52640	expressed protein	gene	expressed protein	chr3	30181227	30184607	-	CDS,three_prime_UTR
3	LOC_Os03g58720	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr3	33430563	33437808	+	CDS
3	LOC_Os09g25560	BT1 family protein, putative, expressed	gene	BT1 family protein, putative, expressed	chr9	15331944	15337883	+	CDS,promoter
3	LOC_Os05g48590	OsIAA19 - Auxin-responsive Aux/IAA gene family member, expressed	gene	OsIAA19 - Auxin-responsive Aux/IAA gene family member, expressed	chr5	27783244	27787748	-	CDS,three_prime_UTR
3	LOC_Os05g38800	PWWP domain containing protein, expressed	gene	PWWP domain containing protein, expressed	chr5	22696501	22699326	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g37720	expressed protein	gene	expressed protein	chr8	23881096	23883781	-	CDS,three_prime_UTR
3	LOC_Os07g07680	frigida, putative, expressed	gene	frigida, putative, expressed	chr7	3845372	3849325	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g41670	expressed protein	gene	expressed protein	chr12	25757103	25762779	+	CDS,three_prime_UTR
3	LOC_Os03g24830	uncharacterized protein HI0077, putative, expressed	gene	uncharacterized protein HI0077, putative, expressed	chr3	14146367	14149033	+	CDS
3	LOC_Os01g08540	DNA mismatch repair protein MSH6-2, putative, expressed	gene	DNA mismatch repair protein MSH6-2, putative, expressed	chr1	4233514	4243531	-	CDS,downstream
3	LOC_Os03g15000	Zinc finger, C3HC4 type domain containing protein, expressed	gene	Zinc finger, C3HC4 type domain containing protein, expressed	chr3	8181185	8185721	-	CDS,three_prime_UTR
3	LOC_Os12g36100	kinesin-4, putative, expressed	gene	kinesin-4, putative, expressed	chr12	22093227	22100443	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g59840	Os1bglu3 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed	gene	Os1bglu3 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed	chr1	34604712	34609930	-	CDS
3	LOC_Os09g38130	auxin efflux carrier component, putative, expressed	gene	auxin efflux carrier component, putative, expressed	chr9	21963017	21967741	+	CDS
3	LOC_Os10g23220	GIL1, putative, expressed	gene	GIL1, putative, expressed	chr10	12042246	12045183	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g33224	BNR/Asp-box repeat family protein, putative, expressed	gene	BNR/Asp-box repeat family protein, putative, expressed	chr7	19855182	19856880	+	CDS,downstream
3	LOC_Os01g42410	pleiotropic drug resistance protein, putative, expressed	gene	pleiotropic drug resistance protein, putative, expressed	chr1	24106036	24114099	-	CDS,three_prime_UTR
3	LOC_Os03g51650	membrane protein, putative, expressed	gene	membrane protein, putative, expressed	chr3	29553580	29559063	-	CDS,promoter
3	LOC_Os05g49120	NLI interacting factor-like phosphatase, putative, expressed	gene	NLI interacting factor-like phosphatase, putative, expressed	chr5	28113932	28119826	+	CDS,three_prime_UTR
3	LOC_Os01g54100	CK1_CaseinKinase_1a.2 - CK1 includes the casein kinase 1 kinases, expressed	gene	CK1_CaseinKinase_1a.2 - CK1 includes the casein kinase 1 kinases, expressed	chr1	31110247	31115107	-	CDS,three_prime_UTR
3	LOC_Os01g07130	expressed protein	gene	expressed protein	chr1	3357521	3359676	-	five_prime_UTR,CDS,downstream
3	LOC_Os01g34200	AATF, putative, expressed	gene	AATF, putative, expressed	chr1	18852522	18856334	+	CDS,three_prime_UTR
3	LOC_Os06g50560	START domain containing protein	gene	START domain containing protein	chr6	30605146	30611938	-	CDS,promoter
3	LOC_Os06g04010	GAGA-binding protein, putative, expressed	gene	GAGA-binding protein, putative, expressed	chr6	1635525	1639884	-	CDS
3	LOC_Os05g39610	exo70 exocyst complex subunit domain containing protein, expressed	gene	exo70 exocyst complex subunit domain containing protein, expressed	chr5	23192313	23194935	-	three_prime_UTR,promoter
3	LOC_Os01g54470	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr1	31330264	31332569	+	three_prime_UTR,downstream
3	LOC_Os06g06770	OsPOP11 - Putative Prolyl Oligopeptidase homologue, expressed	gene	OsPOP11 - Putative Prolyl Oligopeptidase homologue, expressed	chr6	3185351	3190675	+	CDS,three_prime_UTR
3	LOC_Os05g05470	T-complex protein, putative, expressed	gene	T-complex protein, putative, expressed	chr5	2718673	2723422	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g41400	peptide transporter PTR2, putative, expressed	gene	peptide transporter PTR2, putative, expressed	chr4	24361202	24364033	-	five_prime_UTR,CDS,downstream
3	LOC_Os12g44340	ATMAP70 protein, putative, expressed	gene	ATMAP70 protein, putative, expressed	chr12	27453510	27457990	+	CDS,three_prime_UTR
3	LOC_Os12g04280	conserved hypothetical protein	gene	conserved hypothetical protein	chr12	1812870	1814809	+	CDS
3	LOC_Os04g50890	secretory carrier-associated membrane protein, putative, expressed	gene	secretory carrier-associated membrane protein, putative, expressed	chr4	29924842	29928534	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g64900	HEAT, putative, expressed	gene	HEAT, putative, expressed	chr1	37665665	37680665	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g34520	mitosis protein dim1, putative, expressed	gene	mitosis protein dim1, putative, expressed	chr10	18340063	18342842	+	CDS,three_prime_UTR
3	LOC_Os04g58160	fiber protein Fb34, putative, expressed	gene	fiber protein Fb34, putative, expressed	chr4	34454298	34459501	+	three_prime_UTR
3	LOC_Os10g19860	XI-I, putative, expressed	gene	XI-I, putative, expressed	chr10	9836124	9846535	+	CDS
3	LOC_Os04g01540	expressed protein	gene	expressed protein	chr4	369768	371419	-	three_prime_UTR,promoter
3	LOC_Os10g05680	expressed protein	gene	expressed protein	chr10	2842271	2844464	+	three_prime_UTR,promoter,downstream
3	LOC_Os05g03490	expressed protein	gene	expressed protein	chr5	1475270	1477645	+	CDS,three_prime_UTR
3	LOC_Os07g47530	AAA-type ATPase family protein, putative, expressed	gene	AAA-type ATPase family protein, putative, expressed	chr7	28422650	28434334	+	CDS,three_prime_UTR
3	LOC_Os02g33860	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr2	20176345	20180268	+	CDS
3	LOC_Os09g20830	heat shock factor-binding protein 1, putative, expressed	gene	heat shock factor-binding protein 1, putative, expressed	chr9	12544572	12549355	-	three_prime_UTR,CDS,five_prime_UTR,promoter
3	LOC_Os03g15950	enolase, putative, expressed	gene	enolase, putative, expressed	chr3	8799399	8804040	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g42830	adaptin ear-binding coat-associated protein 2, putative, expressed	gene	adaptin ear-binding coat-associated protein 2, putative, expressed	chr1	24374833	24378885	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g51950	serine/threonine-protein kinase HT1, putative, expressed	gene	serine/threonine-protein kinase HT1, putative, expressed	chr4	30640433	30644460	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g06330	nifU, putative, expressed	gene	nifU, putative, expressed	chr5	3241275	3245177	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g61030	VHS and GAT domain containing protein, expressed	gene	VHS and GAT domain containing protein, expressed	chr1	35313316	35317802	-	CDS,three_prime_UTR
3	LOC_Os02g51119	expressed protein	gene	expressed protein	chr2	31267342	31278180	-	five_prime_UTR,three_prime_UTR
3	LOC_Os08g08570	expressed protein	gene	expressed protein	chr8	4946241	4951241	+	CDS,three_prime_UTR
3	LOC_Os06g43430	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr6	26104110	26106279	-	CDS
3	LOC_Os04g53460	AT hook motif family protein, expressed	gene	AT hook motif family protein, expressed	chr4	31646000	31651374	-	CDS,three_prime_UTR
3	LOC_Os06g01390	acyl-coenzyme A oxidase 1.2, peroxisomal, putative, expressed	gene	acyl-coenzyme A oxidase 1.2, peroxisomal, putative, expressed	chr6	226701	231808	+	CDS,three_prime_UTR
3	LOC_Os03g03180	uncharacterized Cys-rich domain containing protein, putative, expressed	gene	uncharacterized Cys-rich domain containing protein, putative, expressed	chr3	1344956	1348519	-	CDS,three_prime_UTR
3	LOC_Os06g03682	calcium-dependent protein kinase isoform AK1, putative, expressed	gene	calcium-dependent protein kinase isoform AK1, putative, expressed	chr6	1444508	1447682	-	three_prime_UTR
3	LOC_Os06g37670	S-locus-like receptor protein kinase, putative, expressed	gene	S-locus-like receptor protein kinase, putative, expressed	chr6	22314610	22318020	+	CDS
3	LOC_Os08g03390	pre-mRNA-splicing factor SLU7, putative, expressed	gene	pre-mRNA-splicing factor SLU7, putative, expressed	chr8	1584128	1588010	+	CDS,three_prime_UTR
3	LOC_Os01g71000	protein kinase APK1B, chloroplast precursor, putative, expressed	gene	protein kinase APK1B, chloroplast precursor, putative, expressed	chr1	41094862	41099324	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g52310	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr3	30032088	30035897	-	CDS,three_prime_UTR
3	LOC_Os09g21430	ZOS9-05 - C2H2 zinc finger protein	gene	ZOS9-05 - C2H2 zinc finger protein	chr9	12950142	12960778	-	CDS
3	LOC_Os05g08414	expressed protein	gene	expressed protein	chr5	4589125	4591651	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g06390	NBS-LRR type disease resistance protein, putative, expressed	gene	NBS-LRR type disease resistance protein, putative, expressed	chr6	2979289	2983309	-	CDS,downstream
3	LOC_Os01g48060	auxin response factor, putative, expressed	gene	auxin response factor, putative, expressed	chr1	27500462	27506137	-	CDS,three_prime_UTR
3	LOC_Os08g41380	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr8	26131321	26134774	+	three_prime_UTR,downstream
3	LOC_Os05g35266	galactosyltransferase, putative, expressed	gene	galactosyltransferase, putative, expressed	chr5	20882227	20885585	-	five_prime_UTR,downstream
3	LOC_Os05g36930	histone deacetylase, putative, expressed	gene	histone deacetylase, putative, expressed	chr5	21504723	21509253	-	CDS
3	LOC_Os12g42060	OsWAK128b - OsWAK receptor-like protein kinase, expressed	gene	OsWAK128b - OsWAK receptor-like protein kinase, expressed	chr12	26053463	26057050	+	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os08g01040	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr8	25272	32518	-	three_prime_UTR,promoter
3	LOC_Os06g49870	tRNA-dihydrouridine synthase, putative, expressed	gene	tRNA-dihydrouridine synthase, putative, expressed	chr6	30186082	30188240	-	CDS,three_prime_UTR
3	LOC_Os07g35580	TKL_IRAK_DUF26-lc.20 - DUF26 kinases have homology to DUF26 containing loci, expressed	gene	TKL_IRAK_DUF26-lc.20 - DUF26 kinases have homology to DUF26 containing loci, expressed	chr7	21294203	21298583	-	CDS
3	LOC_Os12g21500	exosome complex exonuclease, putative, expressed	gene	exosome complex exonuclease, putative, expressed	chr12	12072448	12085080	+	CDS
3	LOC_Os01g58700	expressed protein	gene	expressed protein	chr1	33929125	33931898	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g32310	serine/threonine-protein kinase NAK, putative, expressed	gene	serine/threonine-protein kinase NAK, putative, expressed	chr4	19193893	19199192	+	CDS
3	LOC_Os11g09130	receptor-like protein kinase 5 precursor, putative	gene	receptor-like protein kinase 5 precursor, putative	chr11	4856696	4858627	+	CDS,promoter
3	LOC_Os02g13840	citrate synthase, putative, expressed	gene	citrate synthase, putative, expressed	chr2	7491165	7497891	+	CDS
3	LOC_Os07g33660	expressed protein	gene	expressed protein	chr7	20112516	20114211	+	three_prime_UTR,downstream
3	LOC_Os04g51780	expressed protein	gene	expressed protein	chr4	30497049	30500188	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g24220	OsWAK32 - OsWAK receptor-like protein kinase, expressed	gene	OsWAK32 - OsWAK receptor-like protein kinase, expressed	chr4	13853940	13858978	+	CDS,three_prime_UTR
3	LOC_Os03g54850	NLI interacting factor-like phosphatase, putative, expressed	gene	NLI interacting factor-like phosphatase, putative, expressed	chr3	31169475	31172092	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g44050	methyladenine glycosylase, putative, expressed	gene	methyladenine glycosylase, putative, expressed	chr6	26568419	26571461	-	CDS,three_prime_UTR
3	LOC_Os05g19954	tRNA pseudouridine synthase family protein, putative, expressed	gene	tRNA pseudouridine synthase family protein, putative, expressed	chr5	11647720	11656521	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g48355	expressed protein	gene	expressed protein	chr6	29234214	29235566	-	CDS,promoter
3	LOC_Os02g07920	expressed protein	gene	expressed protein	chr2	4144319	4147059	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g02770	expressed protein	gene	expressed protein	chr3	1076382	1078380	-	three_prime_UTR
3	LOC_Os06g03600	transcriptional corepressor SEUSS, putative, expressed	gene	transcriptional corepressor SEUSS, putative, expressed	chr6	1388014	1394805	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g45570	expressed protein	gene	expressed protein	chr4	26769305	26775145	-	CDS,three_prime_UTR
3	LOC_Os07g08890	disease resistance protein RPM1, putative, expressed	gene	disease resistance protein RPM1, putative, expressed	chr7	4617667	4621814	+	five_prime_UTR,CDS
3	LOC_Os04g42870	methyltransferase domain containing protein, putative, expressed	gene	methyltransferase domain containing protein, putative, expressed	chr4	25187353	25189442	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g46240	green ripe-like, putative, expressed	gene	green ripe-like, putative, expressed	chr5	26752922	26756094	-	CDS,promoter
3	LOC_Os01g41890	MLA1, putative, expressed	gene	MLA1, putative, expressed	chr1	23745796	23750669	+	CDS
3	LOC_Os03g01730	expressed protein	gene	expressed protein	chr3	464176	467044	+	CDS
3	LOC_Os06g07600	uncharacterized glycosyltransferase, putative, expressed	gene	uncharacterized glycosyltransferase, putative, expressed	chr6	3674573	3678003	-	CDS,three_prime_UTR
3	LOC_Os02g22370	expressed protein	gene	expressed protein	chr2	13349857	13360648	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g47350	RNA polymerase I specific transcription initiation factor RRN3 family protein, putative, expressed	gene	RNA polymerase I specific transcription initiation factor RRN3 family protein, putative, expressed	chr6	28698603	28705491	+	CDS,promoter
3	LOC_Os03g27960	sodium/calcium exchanger protein, putative, expressed	gene	sodium/calcium exchanger protein, putative, expressed	chr3	16059798	16063816	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g03230	membrane related protein CP5, putative, expressed	gene	membrane related protein CP5, putative, expressed	chr2	1288971	1292421	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g13810	DNA binding protein, putative, expressed	gene	DNA binding protein, putative, expressed	chr2	7466238	7470926	-	CDS
3	LOC_Os04g53700	zinc finger protein, putative, expressed	gene	zinc finger protein, putative, expressed	chr4	31817613	31822220	-	CDS,promoter
3	LOC_Os01g51300	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr1	29500077	29505910	+	CDS,three_prime_UTR
3	LOC_Os02g05430	expressed protein	gene	expressed protein	chr2	2611226	2614085	-	three_prime_UTR,promoter
3	LOC_Os06g43044	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr6	25869094	25875331	-	CDS
3	LOC_Os11g41160	phosphoserine phosphatase, chloroplast precursor, putative, expressed	gene	phosphoserine phosphatase, chloroplast precursor, putative, expressed	chr11	24189645	24193168	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g67260	hypothetical protein	gene	hypothetical protein	chr1	39039588	39041079	-	CDS,promoter
3	LOC_Os11g46960	receptor-like protein kinase precursor, putative, expressed	gene	receptor-like protein kinase precursor, putative, expressed	chr11	27701113	27705167	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os03g11380	SNARE domain containing protein, putative, expressed	gene	SNARE domain containing protein, putative, expressed	chr3	5859717	5862894	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g24630	magnesium-dependent phosphatase 1, putative, expressed	gene	magnesium-dependent phosphatase 1, putative, expressed	chr11	13584842	13588805	-	CDS
3	LOC_Os03g07570	aminotransferase, putative, expressed	gene	aminotransferase, putative, expressed	chr3	3853300	3857407	+	CDS,three_prime_UTR
3	LOC_Os12g36640	universal stress protein domain containing protein, putative, expressed	gene	universal stress protein domain containing protein, putative, expressed	chr12	22395790	22398239	-	three_prime_UTR,promoter
3	LOC_Os08g40630	mTERF domain containing protein, expressed	gene	mTERF domain containing protein, expressed	chr8	25716541	25719263	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g09715	F-box domain containing protein	gene	F-box domain containing protein	chr8	5612581	5615238	+	CDS,promoter
3	LOC_Os01g16370	NBS-LRR type disease resistance protein, putative, expressed	gene	NBS-LRR type disease resistance protein, putative, expressed	chr1	9292171	9298764	+	CDS
3	LOC_Os02g48630	expressed protein	gene	expressed protein	chr2	29777479	29780236	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g16120	myosin heavy chain-related, putative, expressed	gene	myosin heavy chain-related, putative, expressed	chr3	8891092	8894496	-	CDS,three_prime_UTR,downstream
3	LOC_Os02g57100	expressed protein	gene	expressed protein	chr2	34957755	34960733	-	CDS,three_prime_UTR
3	LOC_Os02g42890	cytochrome b561, putative, expressed	gene	cytochrome b561, putative, expressed	chr2	25791426	25794165	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g30910	CAAX amino terminal protease family protein, putative, expressed	gene	CAAX amino terminal protease family protein, putative, expressed	chr6	17972894	17977693	+	CDS,three_prime_UTR
3	LOC_Os08g28980	exonuclease, putative, expressed	gene	exonuclease, putative, expressed	chr8	17727337	17732096	-	CDS,three_prime_UTR
3	LOC_Os07g08220	expressed protein	gene	expressed protein	chr7	4190052	4194090	-	five_prime_UTR,CDS
3	LOC_Os10g35140	integral membrane protein, putative, expressed	gene	integral membrane protein, putative, expressed	chr10	18679952	18682562	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g15360	RAD23 DNA repair protein, putative, expressed	gene	RAD23 DNA repair protein, putative, expressed	chr6	8719559	8725683	+	CDS
3	LOC_Os11g04200	M phase phosphoprotein 10, putative, expressed	gene	M phase phosphoprotein 10, putative, expressed	chr11	1706618	1711885	-	CDS,three_prime_UTR
3	LOC_Os02g27400	OsFBX49 - F-box domain containing protein, expressed	gene	OsFBX49 - F-box domain containing protein, expressed	chr2	16144165	16147059	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g55840	expressed protein	gene	expressed protein	chr4	33060082	33066244	+	CDS
3	LOC_Os04g18200	dihydrodipicolinate synthase, chloroplast precursor, putative, expressed	gene	dihydrodipicolinate synthase, chloroplast precursor, putative, expressed	chr4	10052461	10055906	+	CDS
3	LOC_Os04g41370	Leucine Rich Repeat family protein	gene	Leucine Rich Repeat family protein	chr4	24353323	24356451	-	CDS
3	LOC_Os10g25780	FAD-linked oxidoreductase protein, putative, expressed	gene	FAD-linked oxidoreductase protein, putative, expressed	chr10	13288315	13291995	-	CDS
3	LOC_Os04g28210	verticillium wilt disease resistance protein, putative, expressed	gene	verticillium wilt disease resistance protein, putative, expressed	chr4	16495139	16500548	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g42970	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	gene	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	chr1	24470882	24477387	-	CDS
3	LOC_Os01g59890	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr1	34635108	34638581	+	CDS
3	LOC_Os04g23620	D-mannose binding lectin family protein	gene	D-mannose binding lectin family protein	chr4	13512075	13515129	-	CDS,downstream
3	LOC_Os05g34260	transposon protein, putative, Ac/Ds sub-class, expressed	gene	transposon protein, putative, Ac/Ds sub-class, expressed	chr5	20214681	20219547	-	CDS,three_prime_UTR,downstream
3	LOC_Os04g40510	glycosyl hydrolase family 5 protein, putative, expressed	gene	glycosyl hydrolase family 5 protein, putative, expressed	chr4	23879579	23883390	+	three_prime_UTR,promoter,downstream
3	LOC_Os08g14440	uridylyltransferase-related, putative, expressed	gene	uridylyltransferase-related, putative, expressed	chr8	8667900	8671891	-	CDS,three_prime_UTR
3	LOC_Os09g36860	acyl carrier protein, putative, expressed	gene	acyl carrier protein, putative, expressed	chr9	21253777	21256420	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g65330	expressed protein	gene	expressed protein	chr1	37897882	37905115	-	CDS,three_prime_UTR
3	LOC_Os03g27820	expressed protein	gene	expressed protein	chr3	15959816	15965239	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g23580	xylosyltransferase, putative, expressed	gene	xylosyltransferase, putative, expressed	chr4	13483925	13488779	-	CDS,three_prime_UTR
3	LOC_Os06g12110	mTERF family protein, expressed	gene	mTERF family protein, expressed	chr6	6481367	6484678	+	three_prime_UTR,downstream
3	LOC_Os03g15580	AT hook motif family protein, expressed	gene	AT hook motif family protein, expressed	chr3	8580438	8595708	-	CDS,downstream
3	LOC_Os02g45130	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr2	27366159	27370894	-	CDS,promoter
3	LOC_Os07g19444	regulatory protein, putative, expressed	gene	regulatory protein, putative, expressed	chr7	11495658	11504220	+	CDS,downstream
3	LOC_Os02g17380	EMB1303, putative, expressed	gene	EMB1303, putative, expressed	chr2	9993961	9998255	+	CDS,three_prime_UTR
3	LOC_Os01g67134	ribosomal L18p/L5e family protein, putative, expressed	gene	ribosomal L18p/L5e family protein, putative, expressed	chr1	38972601	38975494	+	CDS,three_prime_UTR
3	LOC_Os01g66960	selenoprotein precursor, putative, expressed	gene	selenoprotein precursor, putative, expressed	chr1	38890108	38893703	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g34970	arsenical pump-driving ATPase, putative, expressed	gene	arsenical pump-driving ATPase, putative, expressed	chr9	20371287	20374723	-	CDS,promoter
3	LOC_Os05g19974	endonuclease/exonuclease/phosphatase family protein, putative, expressed	gene	endonuclease/exonuclease/phosphatase family protein, putative, expressed	chr5	11671409	11681066	+	CDS,three_prime_UTR
3	LOC_Os01g72670	expressed protein	gene	expressed protein	chr1	42161440	42165418	-	CDS,three_prime_UTR
3	LOC_Os09g15790	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr9	9642528	9645171	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g56910	lecithine cholesterol acyltransferase, putative	gene	lecithine cholesterol acyltransferase, putative	chr2	34876958	34882553	-	CDS,promoter
3	LOC_Os02g50880	OsDegp3 - Putative Deg protease homologue, expressed	gene	OsDegp3 - Putative Deg protease homologue, expressed	chr2	31090294	31095320	-	CDS
3	LOC_Os05g01750	TruB family pseudouridylate synthase, putative, expressed	gene	TruB family pseudouridylate synthase, putative, expressed	chr5	448732	453210	-	three_prime_UTR,CDS,promoter,downstream
3	LOC_Os12g35060	expressed protein	gene	expressed protein	chr12	21296696	21303604	+	CDS,three_prime_UTR
3	LOC_Os08g19590	Homeobox domain containing protein, expressed	gene	Homeobox domain containing protein, expressed	chr8	11701608	11710049	+	CDS
3	LOC_Os06g24730	hydrolase, alpha/beta fold family domain containing protein, expressed	gene	hydrolase, alpha/beta fold family domain containing protein, expressed	chr6	14525888	14531031	+	CDS,three_prime_UTR
3	LOC_Os01g56330	TKL_IRAK_CrRLK1L-1.5 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed	gene	TKL_IRAK_CrRLK1L-1.5 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed	chr1	32460834	32464022	+	three_prime_UTR,downstream
3	LOC_Os05g30750	anthranilate phosphoribosyltransferase, putative, expressed	gene	anthranilate phosphoribosyltransferase, putative, expressed	chr5	17751559	17755951	+	three_prime_UTR,downstream
3	LOC_Os10g27050	OsPP2Ac-4 - Phosphatase 2A isoform 4 belonging to family 2, expressed	gene	OsPP2Ac-4 - Phosphatase 2A isoform 4 belonging to family 2, expressed	chr10	14184535	14189662	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g02890	expressed protein	gene	expressed protein	chr4	1124261	1130522	+	CDS
3	LOC_Os03g14260	guanine nucleotide exchange family protein, putative, expressed	gene	guanine nucleotide exchange family protein, putative, expressed	chr3	7752024	7762666	-	CDS,three_prime_UTR
3	LOC_Os02g17320	uridine/cytidine kinase-like 1, putative, expressed	gene	uridine/cytidine kinase-like 1, putative, expressed	chr2	9928815	9937416	-	CDS,three_prime_UTR
3	LOC_Os04g47970	ORM1, putative, expressed	gene	ORM1, putative, expressed	chr4	28336743	28340891	+	CDS,three_prime_UTR
3	LOC_Os05g04530	IF, putative, expressed	gene	IF, putative, expressed	chr5	2100625	2104829	-	CDS,promoter
3	LOC_Os05g14170	expressed protein	gene	expressed protein	chr5	7926975	7936354	+	CDS,three_prime_UTR
3	LOC_Os07g04220	wound and phytochrome signaling involved receptor like kinase, putative, expressed	gene	wound and phytochrome signaling involved receptor like kinase, putative, expressed	chr7	1850400	1855200	+	CDS
3	LOC_Os02g55134	cytochrome c oxidase copper chaperone, putative, expressed	gene	cytochrome c oxidase copper chaperone, putative, expressed	chr2	33770108	33771760	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g06220	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr3	3114962	3119763	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g17120	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr12	9796967	9797893	+	CDS,downstream
3	LOC_Os12g04880	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr12	2092432	2097017	+	CDS
3	LOC_Os03g57290	cullin, putative, expressed	gene	cullin, putative, expressed	chr3	32664920	32671888	+	CDS,promoter
3	LOC_Os09g23070	malonyl-CoA decarboxylase, mitochondrial precursor, putative, expressed	gene	malonyl-CoA decarboxylase, mitochondrial precursor, putative, expressed	chr9	13625115	13628875	-	CDS,three_prime_UTR
3	LOC_Os11g04180	dual specificity protein phosphatase, putative, expressed	gene	dual specificity protein phosphatase, putative, expressed	chr11	1695428	1698221	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g59600	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr4	35254218	35258648	+	CDS,promoter,downstream
3	LOC_Os01g58114	expressed protein	gene	expressed protein	chr1	33608164	33615290	-	CDS,three_prime_UTR
3	LOC_Os06g10220	conserved hypothetical protein	gene	conserved hypothetical protein	chr6	5236898	5239270	+	CDS,downstream
3	LOC_Os03g11460	expressed protein	gene	expressed protein	chr3	5906703	5916055	+	CDS,three_prime_UTR
3	LOC_Os01g15350	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	gene	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	chr1	8592788	8598448	-	CDS,three_prime_UTR
3	LOC_Os09g29080	expressed protein	gene	expressed protein	chr9	17658696	17661226	-	CDS
3	LOC_Os07g44640	ZOS7-13 - C2H2 zinc finger protein, expressed	gene	ZOS7-13 - C2H2 zinc finger protein, expressed	chr7	26632879	26636249	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g46720	nucleolar protein 5A, putative, expressed	gene	nucleolar protein 5A, putative, expressed	chr7	27925165	27929661	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g31880	translation initiation factor, putative, expressed	gene	translation initiation factor, putative, expressed	chr12	19170759	19176655	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g38900	cytosolic Fe-S cluster assembling factor NBP35, putative, expressed	gene	cytosolic Fe-S cluster assembling factor NBP35, putative, expressed	chr2	23508680	23511735	-	CDS,three_prime_UTR
3	LOC_Os12g36740	splicing factor, arginine/serine-rich 18, putative, expressed	gene	splicing factor, arginine/serine-rich 18, putative, expressed	chr12	22474160	22477039	+	CDS,three_prime_UTR
3	LOC_Os10g33840	expressed protein	gene	expressed protein	chr10	17889244	17893258	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g12450	receptor-like protein kinase 2 precursor, putative	gene	receptor-like protein kinase 2 precursor, putative	chr2	6491390	6495136	+	CDS,promoter,downstream
3	LOC_Os08g19610	peptidyl-prolyl cis-trans isomerase, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, putative, expressed	chr8	11727228	11732125	+	three_prime_UTR,CDS
3	LOC_Os10g33730	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr10	17726592	17731996	-	CDS,three_prime_UTR
3	LOC_Os11g03200	EMB2748, putative, expressed	gene	EMB2748, putative, expressed	chr11	1161137	1163911	-	CDS
3	LOC_Os07g41280	6-phosphogluconolactonase, putative, expressed	gene	6-phosphogluconolactonase, putative, expressed	chr7	24735934	24741301	+	CDS,three_prime_UTR
3	LOC_Os11g32369	expressed protein	gene	expressed protein	chr11	18652219	18660463	-	three_prime_UTR,downstream
3	LOC_Os01g52660	POEI51 - Pollen Ole e I allergen and extensin family protein precursor, expressed	gene	POEI51 - Pollen Ole e I allergen and extensin family protein precursor, expressed	chr1	30271867	30273033	-	three_prime_UTR,promoter
3	LOC_Os04g40030	OsFBO17 - F-box and other domain containing protein, expressed	gene	OsFBO17 - F-box and other domain containing protein, expressed	chr4	23641382	23644240	+	CDS,three_prime_UTR
3	LOC_Os01g01720	pex14, putative, expressed	gene	pex14, putative, expressed	chr1	382047	385701	-	CDS
3	LOC_Os08g03570	NAD dependent epimerase/dehydratase family protein, putative, expressed	gene	NAD dependent epimerase/dehydratase family protein, putative, expressed	chr8	1665962	1671097	+	CDS,three_prime_UTR
3	LOC_Os05g25060	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr5	14441285	14449369	-	CDS,three_prime_UTR
3	LOC_Os01g49310	expressed protein	gene	expressed protein	chr1	28344798	28350006	+	CDS
3	LOC_Os03g21080	guanine nucleotide exchange factor, putative, expressed	gene	guanine nucleotide exchange factor, putative, expressed	chr3	12000006	12006559	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g37080	h/ACA ribonucleoprotein complex subunit 1-like protein 1, putative, expressed	gene	h/ACA ribonucleoprotein complex subunit 1-like protein 1, putative, expressed	chr11	21424264	21426279	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g29350	myosin, putative, expressed	gene	myosin, putative, expressed	chr6	16773135	16784412	+	CDS
3	LOC_Os08g19480	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr8	11637363	11641539	+	CDS
3	LOC_Os04g37619	zeaxanthin epoxidase, chloroplast precursor, putative, expressed	gene	zeaxanthin epoxidase, chloroplast precursor, putative, expressed	chr4	22184515	22191695	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g13614	transcription factor, putative, expressed	gene	transcription factor, putative, expressed	chr3	7357088	7368640	-	CDS,three_prime_UTR
3	LOC_Os02g05660	DEAD-box ATP-dependent RNA helicase 35A, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase 35A, putative, expressed	chr2	2766215	2770019	-	CDS,three_prime_UTR
3	LOC_Os07g28090	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr7	16374066	16386453	+	CDS,three_prime_UTR
3	LOC_Os09g11480	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr9	6403474	6405039	-	three_prime_UTR,promoter
3	LOC_Os03g31706	expressed protein	gene	expressed protein	chr3	18108786	18111440	-	CDS,three_prime_UTR
3	LOC_Os02g58270	metallo-beta-lactamase family protein, putative, expressed	gene	metallo-beta-lactamase family protein, putative, expressed	chr2	35659297	35661622	-	CDS,downstream
3	LOC_Os04g58140	elongation factor Tu, putative, expressed	gene	elongation factor Tu, putative, expressed	chr4	34441235	34446230	-	CDS
3	LOC_Os07g48850	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr7	29226762	29231896	-	three_prime_UTR,promoter
3	LOC_Os06g11320	peptidyl-prolyl cis-trans isomerase CYP40, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase CYP40, putative, expressed	chr6	5932789	5938646	-	CDS
3	LOC_Os07g35985	expressed protein	gene	expressed protein	chr7	21523206	21527268	-	three_prime_UTR
3	LOC_Os05g33760	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr5	19831945	19837308	-	three_prime_UTR
3	LOC_Os08g14000	retrotransposon protein, putative, Ty1-copia subclass, expressed	gene	retrotransposon protein, putative, Ty1-copia subclass, expressed	chr8	8393268	8396877	+	CDS,promoter
3	LOC_Os08g04110	transporter, putative, expressed	gene	transporter, putative, expressed	chr8	1993486	1997902	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g05310	pheophorbide a oxygenase, chloroplast precursor, putative, expressed	gene	pheophorbide a oxygenase, chloroplast precursor, putative, expressed	chr3	2575492	2579448	+	CDS,promoter
3	LOC_Os04g39444	LSM domain containing protein, expressed	gene	LSM domain containing protein, expressed	chr4	23312012	23314226	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g69970	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr1	40461964	40466716	-	CDS,three_prime_UTR
3	LOC_Os11g01370	PMR5, putative, expressed	gene	PMR5, putative, expressed	chr11	226279	230877	+	CDS,three_prime_UTR
3	LOC_Os10g08580	FAD binding domain of DNA photolyase domain containing protein, expressed	gene	FAD binding domain of DNA photolyase domain containing protein, expressed	chr10	4679666	4683528	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g36790	transcription factor like protein, putative, expressed	gene	transcription factor like protein, putative, expressed	chr4	22027460	22029396	+	three_prime_UTR,downstream
3	LOC_Os05g05210	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr5	2536530	2540719	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g45040	zinc finger protein 593, putative, expressed	gene	zinc finger protein 593, putative, expressed	chr8	28269346	28271792	-	three_prime_UTR
3	LOC_Os09g39860	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr9	22851841	22854031	-	three_prime_UTR,promoter
3	LOC_Os11g03500	MATE efflux family protein, putative, expressed	gene	MATE efflux family protein, putative, expressed	chr11	1347039	1351398	-	CDS
3	LOC_Os09g36976	trafficking protein particle complex subunit, putative, expressed	gene	trafficking protein particle complex subunit, putative, expressed	chr9	21330246	21332247	-	CDS,three_prime_UTR,downstream
3	LOC_Os08g16559	expressed protein	gene	expressed protein	chr8	10130766	10134080	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os06g49030	activator of 90 kDa heat shock protein ATPase homolog, putative, expressed	gene	activator of 90 kDa heat shock protein ATPase homolog, putative, expressed	chr6	29712413	29716019	+	CDS,three_prime_UTR
3	LOC_Os04g34270	serine/threonine-protein kinase receptor precursor, putative, expressed	gene	serine/threonine-protein kinase receptor precursor, putative, expressed	chr4	20585797	20588679	+	CDS
3	LOC_Os08g04440	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr8	2172394	2176074	-	three_prime_UTR
3	LOC_Os03g11900	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr3	6231979	6237297	-	three_prime_UTR,promoter
3	LOC_Os08g02410	40S ribosomal protein S13, putative, expressed	gene	40S ribosomal protein S13, putative, expressed	chr8	961570	963535	-	CDS,three_prime_UTR
3	LOC_Os04g41200	lipase, putative, expressed	gene	lipase, putative, expressed	chr4	24246341	24255208	-	CDS,three_prime_UTR
3	LOC_Os01g67120	rhodanese-like domain containing protein, putative, expressed	gene	rhodanese-like domain containing protein, putative, expressed	chr1	38960260	38965088	-	CDS,three_prime_UTR
3	LOC_Os06g03486	expressed protein	gene	expressed protein	chr6	1340457	1343548	+	CDS,three_prime_UTR
3	LOC_Os05g08570	OsIAA15 - Auxin-responsive Aux/IAA gene family member, expressed	gene	OsIAA15 - Auxin-responsive Aux/IAA gene family member, expressed	chr5	4681437	4684521	-	three_prime_UTR,CDS,promoter
3	LOC_Os09g27370	Spc97 / Spc98 family protein, putative, expressed	gene	Spc97 / Spc98 family protein, putative, expressed	chr9	16632304	16635533	+	three_prime_UTR
3	LOC_Os10g02350	transmembrane 9 superfamily member, putative, expressed	gene	transmembrane 9 superfamily member, putative, expressed	chr10	839016	842835	-	CDS,three_prime_UTR
3	LOC_Os11g37090	pumilio-family RNA binding repeat domain containing protein, expressed	gene	pumilio-family RNA binding repeat domain containing protein, expressed	chr11	21426452	21431140	-	three_prime_UTR,promoter
3	LOC_Os11g34150	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr11	19526027	19530896	-	CDS,three_prime_UTR,five_prime_UTR
3	LOC_Os11g06130	PHD-finger family protein, expressed	gene	PHD-finger family protein, expressed	chr11	2905301	2914171	-	CDS,three_prime_UTR,five_prime_UTR
3	LOC_Os10g29660	TATA-binding protein, putative, expressed	gene	TATA-binding protein, putative, expressed	chr10	15353600	15356201	-	three_prime_UTR,CDS,promoter
3	LOC_Os06g15810	integral membrane protein, putative, expressed	gene	integral membrane protein, putative, expressed	chr6	8973515	8975735	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g30900	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr2	18440134	18444643	+	CDS
3	LOC_Os04g53612	APO, putative, expressed	gene	APO, putative, expressed	chr4	31774421	31776771	-	three_prime_UTR
3	LOC_Os05g01710	transcription initiation factor IIA gamma chain, putative, expressed	gene	transcription initiation factor IIA gamma chain, putative, expressed	chr5	437010	443270	+	CDS,three_prime_UTR
3	LOC_Os04g24165	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr4	13808816	13811248	-	three_prime_UTR,promoter,downstream
3	LOC_Os12g29560	DHHC zinc finger domain containing protein, expressed	gene	DHHC zinc finger domain containing protein, expressed	chr12	17613370	17617950	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os08g01840	nucleic acid binding protein, putative, expressed	gene	nucleic acid binding protein, putative, expressed	chr8	512747	517277	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g46780	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr5	27030910	27036386	+	CDS
3	LOC_Os06g04650	peptide methionine sulfoxide reductase, putative, expressed	gene	peptide methionine sulfoxide reductase, putative, expressed	chr6	2027119	2029307	-	three_prime_UTR,promoter
3	LOC_Os06g12690	DCN1-like protein 2, putative, expressed	gene	DCN1-like protein 2, putative, expressed	chr6	6927342	6931491	-	CDS,three_prime_UTR
3	LOC_Os01g55050	protein of unknown function DUF1421 domain containing protein, expressed	gene	protein of unknown function DUF1421 domain containing protein, expressed	chr1	31650572	31655487	-	CDS
3	LOC_Os09g33860	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr9	19991142	19995387	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g03470	expressed protein	gene	expressed protein	chr3	1498617	1503240	-	CDS
3	LOC_Os04g15550	expressed protein	gene	expressed protein	chr4	8449101	8457121	+	CDS,three_prime_UTR
3	LOC_Os01g43774	cytochrome P450 72A1, putative, expressed	gene	cytochrome P450 72A1, putative, expressed	chr1	25072805	25077505	+	CDS,promoter
3	LOC_Os01g32080	thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed	gene	thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed	chr1	17559710	17563902	+	three_prime_UTR,CDS,downstream
3	LOC_Os06g09688	chaperonin, putative	gene	chaperonin, putative	chr6	4948222	4952398	+	CDS
3	LOC_Os01g16240	OsCam1-3 - Calmodulin, expressed	gene	OsCam1-3 - Calmodulin, expressed	chr1	9194527	9197962	-	CDS,three_prime_UTR
3	LOC_Os10g36480	expressed protein	gene	expressed protein	chr10	19454137	19457073	+	CDS,three_prime_UTR
3	LOC_Os01g12860	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr1	7114771	7123102	+	three_prime_UTR,downstream
3	LOC_Os07g33560	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr7	20049254	20053052	+	CDS
3	LOC_Os03g59170	OsAPRL5  adenosine 5'-phosphosulfate reductase-like OsAPRL5, expressed	gene	OsAPRL5  adenosine 5'-phosphosulfate reductase-like OsAPRL5, expressed	chr3	33685978	33689100	+	three_prime_UTR
3	LOC_Os01g67320	expressed protein	gene	expressed protein	chr1	39077513	39081098	+	CDS,downstream
3	LOC_Os10g25320	initiation factor 2 subunit family domain containing protein, expressed	gene	initiation factor 2 subunit family domain containing protein, expressed	chr10	13019349	13025565	-	CDS,three_prime_UTR
3	LOC_Os10g34470	HD domain containing protein 2, putative, expressed	gene	HD domain containing protein 2, putative, expressed	chr10	18315099	18320334	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g40870	alveolar soft part sarcoma chromosome region, candidate 1, putative, expressed	gene	alveolar soft part sarcoma chromosome region, candidate 1, putative, expressed	chr4	24068169	24072322	+	CDS
3	LOC_Os03g60110	KH domain containing protein, putative, expressed	gene	KH domain containing protein, putative, expressed	chr3	34179264	34183709	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g08300	glycosyl transferase, group 1 domain containing protein, expressed	gene	glycosyl transferase, group 1 domain containing protein, expressed	chr3	4222432	4227470	-	CDS,three_prime_UTR
3	LOC_Os07g46730	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr7	27928317	27932849	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g15540	kinesin motor domain containing protein, putative, expressed	gene	kinesin motor domain containing protein, putative, expressed	chr1	8734984	8739559	-	CDS,downstream
3	LOC_Os06g08154	receptor-like protein kinase 5 precursor, putative, expressed	gene	receptor-like protein kinase 5 precursor, putative, expressed	chr6	3955914	3960587	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g46620	chaperone protein dnaJ 10, putative, expressed	gene	chaperone protein dnaJ 10, putative, expressed	chr5	26928598	26932517	-	CDS,downstream
3	LOC_Os07g07520	OsFBX217 - F-box domain containing protein, expressed	gene	OsFBX217 - F-box domain containing protein, expressed	chr7	3744354	3748975	+	CDS
3	LOC_Os05g05450	MA3 domain containing protein, expressed	gene	MA3 domain containing protein, expressed	chr5	2713877	2716772	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g19880	alpha-1,2-fucosidase, putative, expressed	gene	alpha-1,2-fucosidase, putative, expressed	chr10	9849711	9860292	-	CDS
3	LOC_Os02g34560	plant neutral invertase domain containing protein, expressed	gene	plant neutral invertase domain containing protein, expressed	chr2	20712019	20716052	-	CDS,three_prime_UTR
3	LOC_Os03g12940	OsFBO13 - F-box and other domain containing protein, expressed	gene	OsFBO13 - F-box and other domain containing protein, expressed	chr3	6979637	6988634	-	CDS
3	LOC_Os02g56550	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr2	34632003	34635211	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g25000	expressed protein	gene	expressed protein	chr10	12796767	12798734	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g18500	mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	gene	mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	chr3	10367804	10371524	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g33630	inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed	gene	inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed	chr5	19717620	19723446	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g28050	expressed protein	gene	expressed protein	chr4	16390002	16394540	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g02770	resistance-related receptor-like kinase, putative, expressed	gene	resistance-related receptor-like kinase, putative, expressed	chr1	960681	964151	+	CDS
3	LOC_Os07g46450	pleckstrin homology domain-containing protein, putative, expressed	gene	pleckstrin homology domain-containing protein, putative, expressed	chr7	27712328	27721670	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g13540	NIN, putative, expressed	gene	NIN, putative, expressed	chr1	7570236	7575817	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g03440	actin, putative, expressed	gene	actin, putative, expressed	chr8	1608692	1613852	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g28800	heat shock protein DnaJ, putative	gene	heat shock protein DnaJ, putative	chr7	16862286	16866129	-	CDS,promoter
3	LOC_Os08g33340	RAD23 DNA repair protein, putative, expressed	gene	RAD23 DNA repair protein, putative, expressed	chr8	20794253	20799011	+	CDS,downstream
3	LOC_Os07g03830	lectin-like receptor kinase, putative	gene	lectin-like receptor kinase, putative	chr7	1598870	1600885	-	CDS,promoter
3	LOC_Os04g35150	thioredoxin, putative	gene	thioredoxin, putative	chr4	21190421	21193440	-	CDS,promoter
3	LOC_Os03g48140	myosin, putative, expressed	gene	myosin, putative, expressed	chr3	27367888	27380565	-	CDS
3	LOC_Os03g19490	expressed protein	gene	expressed protein	chr3	10958477	10961102	+	three_prime_UTR
3	LOC_Os02g09810	amino acid transporter, putative, expressed	gene	amino acid transporter, putative, expressed	chr2	5058713	5061962	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g11930	disease resistance protein SlVe2 precursor, putative, expressed	gene	disease resistance protein SlVe2 precursor, putative, expressed	chr12	6505399	6508671	+	CDS,downstream
3	LOC_Os05g47446	expressed protein	gene	expressed protein	chr5	27116575	27121134	-	CDS
3	LOC_Os05g11120	prenylated rab acceptor, putative, expressed	gene	prenylated rab acceptor, putative, expressed	chr5	6255191	6257861	-	three_prime_UTR
3	LOC_Os04g28250	cysteine proteinase inhibitor precursor, putative, expressed	gene	cysteine proteinase inhibitor precursor, putative, expressed	chr4	16522035	16522876	-	five_prime_UTR,CDS,promoter,downstream
3	LOC_Os02g30640	basic salivary proline-rich protein 2 precursor, putative, expressed	gene	basic salivary proline-rich protein 2 precursor, putative, expressed	chr2	18233350	18235982	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g47080	pyruvate kinase, putative, expressed	gene	pyruvate kinase, putative, expressed	chr1	26887349	26894688	-	CDS,three_prime_UTR
3	LOC_Os12g35630	elongation factor TS family protein, expressed	gene	elongation factor TS family protein, expressed	chr12	21627198	21633444	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g43560	phox domain-containing protein, putative, expressed	gene	phox domain-containing protein, putative, expressed	chr6	26188975	26197122	-	CDS,downstream
3	LOC_Os06g39680	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr6	23555496	23558288	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g36062	expressed protein	gene	expressed protein	chr4	21845912	21852775	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g48200	callose synthase, putative, expressed	gene	callose synthase, putative, expressed	chr1	27604869	27607632	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g06330	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	gene	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	chr8	3507754	3511010	-	three_prime_UTR,downstream
3	LOC_Os03g32630	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr3	18685654	18688148	-	three_prime_UTR,promoter
3	LOC_Os10g28570	expressed protein	gene	expressed protein	chr10	14797858	14801246	-	three_prime_UTR,CDS
3	LOC_Os04g53470	expressed protein	gene	expressed protein	chr4	31653036	31656964	-	five_prime_UTR,CDS
3	LOC_Os06g09679	chaperonin, putative, expressed	gene	chaperonin, putative, expressed	chr6	4932906	4937501	+	CDS,promoter
3	LOC_Os05g31780	adaptor complexes medium subunit family domain containing protein, expressed	gene	adaptor complexes medium subunit family domain containing protein, expressed	chr5	18447920	18452188	-	CDS,three_prime_UTR
3	LOC_Os02g03890	nuclear transport factor 2, putative, expressed	gene	nuclear transport factor 2, putative, expressed	chr2	1652074	1655460	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g04840	leucine rich repeat protein, putative, expressed	gene	leucine rich repeat protein, putative, expressed	chr6	2111267	2115565	-	CDS,three_prime_UTR
3	LOC_Os06g28880	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr6	16470615	16480722	-	CDS
3	LOC_Os04g58690	tRNA-specific adenosine deaminase 1, putative, expressed	gene	tRNA-specific adenosine deaminase 1, putative, expressed	chr4	34707824	34713684	+	three_prime_UTR,CDS
3	LOC_Os10g40120	U-box domain containing protein, expressed	gene	U-box domain containing protein, expressed	chr10	21407902	21410492	-	CDS,downstream
3	LOC_Os09g01650	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	chr9	465872	472052	+	CDS
3	LOC_Os03g05690	ZOS3-03 - C2H2 zinc finger protein, expressed	gene	ZOS3-03 - C2H2 zinc finger protein, expressed	chr3	2837768	2840687	+	CDS,three_prime_UTR
3	LOC_Os03g21680	phospholipid-transporting ATPase, putative, expressed	gene	phospholipid-transporting ATPase, putative, expressed	chr3	12372926	12379047	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g12020	membrane-anchored ubiquitin-fold protein, putative, expressed	gene	membrane-anchored ubiquitin-fold protein, putative, expressed	chr6	6434825	6438823	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g36170	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr12	22130208	22136367	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g09860	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr1	5108949	5116013	-	three_prime_UTR
3	LOC_Os11g04980	acyl-CoA synthetase protein, putative, expressed	gene	acyl-CoA synthetase protein, putative, expressed	chr11	2127753	2137256	-	CDS
3	LOC_Os04g32490	tRNA nucleotidyltransferase/polyA polymerase family protein, putative, expressed	gene	tRNA nucleotidyltransferase/polyA polymerase family protein, putative, expressed	chr4	19326301	19332840	-	three_prime_UTR
3	LOC_Os03g16010	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	gene	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	chr3	8826583	8832526	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g43050	OsClp11 - Putative Clp protease homologue, expressed	gene	OsClp11 - Putative Clp protease homologue, expressed	chr10	23118587	23120791	+	CDS,promoter,downstream
3	LOC_Os01g08290	transmembrane protein, putative, expressed	gene	transmembrane protein, putative, expressed	chr1	4062704	4065374	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g01020	expressed protein	gene	expressed protein	chr2	9239	13896	-	three_prime_UTR,CDS,promoter
3	LOC_Os11g34120	exportin 1, putative	gene	exportin 1, putative	chr11	19505703	19517634	-	CDS,promoter
3	LOC_Os01g57066	transmembrane protein 49, putative, expressed	gene	transmembrane protein 49, putative, expressed	chr1	32955865	32962248	+	CDS,three_prime_UTR
3	LOC_Os01g13760	dnaJ domain containing protein, expressed	gene	dnaJ domain containing protein, expressed	chr1	7711339	7720253	+	CDS,three_prime_UTR
3	LOC_Os08g43780	carrier, putative	gene	carrier, putative	chr8	27646889	27647746	+	CDS,promoter,downstream
3	LOC_Os07g06590	ML domain protein, putative, expressed	gene	ML domain protein, putative, expressed	chr7	3197767	3200953	+	CDS
3	LOC_Os02g54900	STE_PAK_Ste20_STLK.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	gene	STE_PAK_Ste20_STLK.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	chr2	33617887	33624174	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g11100	bZIP transcription factor domain containing protein, expressed	gene	bZIP transcription factor domain containing protein, expressed	chr11	6138783	6142373	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g52650	chlorophyll A-B binding protein, putative, expressed	gene	chlorophyll A-B binding protein, putative, expressed	chr2	32193653	32195853	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g08270	aminotransferase, classes I and II, domain containing protein, expressed	gene	aminotransferase, classes I and II, domain containing protein, expressed	chr1	4050856	4056690	-	CDS,three_prime_UTR
3	LOC_Os01g33230	UDP-N-acetylglucosamine--N-acetylmuramyl-pyrophosphor yl-undecaprenol N-acetylglucosamine transferase, putative, expressed	gene	UDP-N-acetylglucosamine--N-acetylmuramyl-pyrophosphor yl-undecaprenol N-acetylglucosamine transferase, putative, expressed	chr1	18297089	18302935	-	three_prime_UTR
3	LOC_Os12g12860	CAMK_CAMK_like.46 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.46 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr12	7111176	7115094	+	CDS,three_prime_UTR
3	LOC_Os01g72090	phycoerythrobilin ferredoxin oxidoreductase, putative, expressed	gene	phycoerythrobilin ferredoxin oxidoreductase, putative, expressed	chr1	41821226	41824044	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g03660	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr1	1507235	1511752	+	CDS,three_prime_UTR
3	LOC_Os02g15750	expressed protein	gene	expressed protein	chr2	8873030	8876439	+	CDS
3	LOC_Os11g45920	OsWRKY63 - Superfamily of TFs having WRKY and zinc finger domains	gene	OsWRKY63 - Superfamily of TFs having WRKY and zinc finger domains	chr11	27307710	27314368	-	CDS,downstream
3	LOC_Os04g25990	tRNA methyltransferase complex GCD14 subunit, putative, expressed	gene	tRNA methyltransferase complex GCD14 subunit, putative, expressed	chr4	15113654	15116993	-	CDS,three_prime_UTR
3	LOC_Os01g56820	AGAP000951-PA, putative, expressed	gene	AGAP000951-PA, putative, expressed	chr1	32814064	32818408	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g43010	disease resistance RPP13-like protein 1, putative, expressed	gene	disease resistance RPP13-like protein 1, putative, expressed	chr8	27178745	27182734	-	CDS,three_prime_UTR
3	LOC_Os09g11250	co-chaperone GrpE protein, putative, expressed	gene	co-chaperone GrpE protein, putative, expressed	chr9	6245237	6248750	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g09140	DUF803 domain containing, putative, expressed	gene	DUF803 domain containing, putative, expressed	chr11	4862277	4867350	-	CDS,three_prime_UTR
3	LOC_Os03g58170	stem-specific protein TSJT1, putative, expressed	gene	stem-specific protein TSJT1, putative, expressed	chr3	33103518	33111188	+	CDS,three_prime_UTR,promoter
3	LOC_Os04g34460	PAP fibrillin family domain containing protein, expressed	gene	PAP fibrillin family domain containing protein, expressed	chr4	20701379	20704413	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g59600	peptidase, T1 family, putative, expressed	gene	peptidase, T1 family, putative, expressed	chr1	34469971	34474480	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g04460	NADPH-dependent FMN reductase domain containing protein, expressed	gene	NADPH-dependent FMN reductase domain containing protein, expressed	chr8	2181690	2183810	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g35760	expressed protein	gene	expressed protein	chr4	21620937	21623293	-	CDS,three_prime_UTR,downstream
3	LOC_Os12g44040	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr12	27279471	27282732	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os03g11690	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr3	6114338	6117762	+	three_prime_UTR,downstream
3	LOC_Os12g01430	ribosomal protein L10, putative, expressed	gene	ribosomal protein L10, putative, expressed	chr12	266657	269166	-	CDS,three_prime_UTR
3	LOC_Os05g28980	drought induced 19 protein, putative, expressed	gene	drought induced 19 protein, putative, expressed	chr5	16928472	16935264	-	CDS,three_prime_UTR
3	LOC_Os11g06040	PX domain containing protein, putative, expressed	gene	PX domain containing protein, putative, expressed	chr11	2856637	2864666	-	three_prime_UTR,CDS
3	LOC_Os02g36974	14-3-3 protein, putative, expressed	gene	14-3-3 protein, putative, expressed	chr2	22327412	22331844	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g01920	expressed protein	gene	expressed protein	chr3	566972	569854	-	CDS,three_prime_UTR
3	LOC_Os04g57930	thioredoxin, putative, expressed	gene	thioredoxin, putative, expressed	chr4	34328475	34330243	+	three_prime_UTR,downstream
3	LOC_Os08g02070	OsMADS26 - MADS-box family gene with MIKCc type-box, expressed	gene	OsMADS26 - MADS-box family gene with MIKCc type-box, expressed	chr8	678358	680739	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g12530	smr domain containing protein, expressed	gene	smr domain containing protein, expressed	chr1	6888351	6895414	+	CDS,three_prime_UTR
3	LOC_Os05g46460	hydrolase, alpha/beta fold family domain containing protein, expressed	gene	hydrolase, alpha/beta fold family domain containing protein, expressed	chr5	26850712	26854816	-	CDS,three_prime_UTR
3	LOC_Os11g38200	OsFBDUF60 - F-box and DUF domain containing protein, expressed	gene	OsFBDUF60 - F-box and DUF domain containing protein, expressed	chr11	22179391	22181084	-	CDS,three_prime_UTR
3	LOC_Os12g24540	PHD-finger family protein, expressed	gene	PHD-finger family protein, expressed	chr12	14010131	14017653	-	CDS,three_prime_UTR
3	LOC_Os12g37610	ribosomal protein S6, putative, expressed	gene	ribosomal protein S6, putative, expressed	chr12	23063454	23065827	-	CDS
3	LOC_Os05g44100	trehalose synthase, putative, expressed	gene	trehalose synthase, putative, expressed	chr5	25579016	25583830	+	CDS,three_prime_UTR
3	LOC_Os02g51900	cytokinin-O-glucosyltransferase 2, putative, expressed	gene	cytokinin-O-glucosyltransferase 2, putative, expressed	chr2	31780932	31783162	-	three_prime_UTR,promoter
3	LOC_Os02g04100	peptidase, T1 family, putative, expressed	gene	peptidase, T1 family, putative, expressed	chr2	1784550	1788087	+	CDS
3	LOC_Os03g16690	oxysterol-binding protein, putative, expressed	gene	oxysterol-binding protein, putative, expressed	chr3	9217702	9223119	+	CDS
3	LOC_Os03g30580	expressed protein	gene	expressed protein	chr3	17451979	17455713	-	three_prime_UTR,promoter
3	LOC_Os05g02000	expressed protein	gene	expressed protein	chr5	568721	572522	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g48790	YT521-B-like family domain containing protein, expressed	gene	YT521-B-like family domain containing protein, expressed	chr1	27982644	27989339	+	CDS
3	LOC_Os07g41694	acidic leucine-rich nuclear phosphoprotein 32-related protein 1, putative, expressed	gene	acidic leucine-rich nuclear phosphoprotein 32-related protein 1, putative, expressed	chr7	24983636	24987375	+	CDS
3	LOC_Os05g06680	expressed protein	gene	expressed protein	chr5	3463326	3468732	-	five_prime_UTR,CDS
3	LOC_Os05g06300	3-hydroxyacyl-CoA dehydrogenase, putative, expressed	gene	3-hydroxyacyl-CoA dehydrogenase, putative, expressed	chr5	3219975	3228099	-	CDS,three_prime_UTR
3	LOC_Os04g31020	hypothetical protein	gene	hypothetical protein	chr4	18366402	18371731	+	CDS,promoter
3	LOC_Os02g02130	ribosomal protein L37, putative	gene	ribosomal protein L37, putative	chr2	633642	635608	+	CDS,downstream
3	LOC_Os03g12930	expressed protein	gene	expressed protein	chr3	6973759	6977106	-	CDS,three_prime_UTR
3	LOC_Os12g02370	chalcone--flavonone isomerase, putative, expressed	gene	chalcone--flavonone isomerase, putative, expressed	chr12	765434	767581	-	five_prime_UTR,CDS
3	LOC_Os06g39760	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr6	23612105	23620157	-	CDS
3	LOC_Os02g58260	metallo-beta-lactamase family protein, putative, expressed	gene	metallo-beta-lactamase family protein, putative, expressed	chr2	35655094	35657614	-	CDS,promoter
3	LOC_Os03g58330	BHLH transcription factor, putative, expressed	gene	BHLH transcription factor, putative, expressed	chr3	33225976	33230471	+	CDS
3	LOC_Os01g70520	Os1bglu5 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed	gene	Os1bglu5 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed	chr1	40841199	40847305	+	CDS
3	LOC_Os02g40514	h/ACA ribonucleoprotein complex subunit 3, putative, expressed	gene	h/ACA ribonucleoprotein complex subunit 3, putative, expressed	chr2	24567521	24569475	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g29420	DNA-directed RNA polymerase III subunit RPC8, putative, expressed	gene	DNA-directed RNA polymerase III subunit RPC8, putative, expressed	chr7	17269522	17273285	-	CDS
3	LOC_Os03g48190	expressed protein	gene	expressed protein	chr3	27424877	27429655	-	CDS,three_prime_UTR
3	LOC_Os06g45110	DNA binding protein, putative, expressed	gene	DNA binding protein, putative, expressed	chr6	27278953	27284001	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g32864	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr1	18032676	18035520	-	CDS,three_prime_UTR
3	LOC_Os07g12160	KHG/KDPG aldolase, putative, expressed	gene	KHG/KDPG aldolase, putative, expressed	chr7	6802411	6805865	+	CDS,three_prime_UTR,promoter
3	LOC_Os07g06820	serine/threonine-protein kinase RIO-like, putative, expressed	gene	serine/threonine-protein kinase RIO-like, putative, expressed	chr7	3322740	3328956	+	CDS
3	LOC_Os07g09370	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr7	4934900	4936915	+	three_prime_UTR,downstream
3	LOC_Os05g05300	CRS1/YhbY domain containing protein, putative, expressed	gene	CRS1/YhbY domain containing protein, putative, expressed	chr5	2609380	2614061	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g09310	thioredoxin, putative, expressed	gene	thioredoxin, putative, expressed	chr7	4879569	4881734	-	CDS,three_prime_UTR,downstream
3	LOC_Os11g34270	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	gene	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	chr11	19601706	19608654	+	CDS,three_prime_UTR
3	LOC_Os01g08930	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr1	4484747	4489158	-	CDS
3	LOC_Os01g32980	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr1	18100505	18110302	-	CDS,three_prime_UTR
3	LOC_Os05g04180	agenet domain containing protein, putative, expressed	gene	agenet domain containing protein, putative, expressed	chr5	1885020	1889243	-	CDS,downstream
3	LOC_Os03g15390	GA17271-PA, putative, expressed	gene	GA17271-PA, putative, expressed	chr3	8414570	8418139	-	CDS
3	LOC_Os02g12340	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	6422491	6424004	-	CDS
3	LOC_Os01g46200	expressed protein	gene	expressed protein	chr1	26277030	26283897	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os02g38340	actin, putative, expressed	gene	actin, putative, expressed	chr2	23171603	23176296	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g53140	protein transport protein Sec23B, putative, expressed	gene	protein transport protein Sec23B, putative, expressed	chr3	30469407	30475022	+	CDS,three_prime_UTR
3	LOC_Os06g37660	OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed	gene	OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed	chr6	22306125	22312394	+	CDS,three_prime_UTR
3	LOC_Os08g08040	LSM domain containing protein, expressed	gene	LSM domain containing protein, expressed	chr8	4561431	4564408	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g17230	disease resistance protein, putative, expressed	gene	disease resistance protein, putative, expressed	chr7	10154458	10158781	-	CDS
3	LOC_Os01g52560	Plant PDR ABC transporter associated domain containing protein, expressed	gene	Plant PDR ABC transporter associated domain containing protein, expressed	chr1	30215002	30221930	+	CDS,downstream
3	LOC_Os04g54380	aluminum resistance protein, putative	gene	aluminum resistance protein, putative	chr4	32174092	32177542	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g55300	CAF1 family ribonuclease containing protein, putative, expressed	gene	CAF1 family ribonuclease containing protein, putative, expressed	chr2	33848294	33851179	+	three_prime_UTR,downstream
3	LOC_Os07g17400	zinc finger, RING-type, putative, expressed	gene	zinc finger, RING-type, putative, expressed	chr7	10273155	10276904	+	CDS
3	LOC_Os12g15460	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr12	8820722	8824535	-	three_prime_UTR
3	LOC_Os09g32750	FHA domain containing protein, putative, expressed	gene	FHA domain containing protein, putative, expressed	chr9	19532610	19540470	+	CDS,downstream
3	LOC_Os02g33500	threonyl-tRNA synthetase, putative, expressed	gene	threonyl-tRNA synthetase, putative, expressed	chr2	19918486	19922472	-	CDS
3	LOC_Os09g37760	bromodomain domain containing protein, expressed	gene	bromodomain domain containing protein, expressed	chr9	21751268	21757050	-	CDS,three_prime_UTR
3	LOC_Os04g52690	AAA family ATPase, putative, expressed	gene	AAA family ATPase, putative, expressed	chr4	31178938	31184382	-	CDS
3	LOC_Os07g40740	heparanase-like protein precursor, putative, expressed	gene	heparanase-like protein precursor, putative, expressed	chr7	24416389	24418447	-	five_prime_UTR,CDS,promoter,downstream
3	LOC_Os08g33200	1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed	gene	1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed	chr8	20663412	20670844	-	CDS,three_prime_UTR
3	LOC_Os06g20320	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	chr6	11675954	11681093	+	CDS,downstream
3	LOC_Os01g56270	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr1	32407231	32412591	+	CDS,three_prime_UTR
3	LOC_Os01g73560	leucine rich repeat domain containing protein, putative, expressed	gene	leucine rich repeat domain containing protein, putative, expressed	chr1	42617430	42620683	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g34230	expressed protein	gene	expressed protein	chr11	19578918	19582901	-	CDS,three_prime_UTR
3	LOC_Os02g04500	S-adenosyl-L-methionine-dependent methyltransferase mraW, putative, expressed	gene	S-adenosyl-L-methionine-dependent methyltransferase mraW, putative, expressed	chr2	1998224	2000921	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g37270	MSP domain containing protein, putative, expressed	gene	MSP domain containing protein, putative, expressed	chr7	22332888	22337446	+	CDS,three_prime_UTR
3	LOC_Os07g31884	MATE efflux family protein, putative, expressed	gene	MATE efflux family protein, putative, expressed	chr7	18955329	18962242	-	CDS
3	LOC_Os02g39700	RNA binding protein, putative, expressed	gene	RNA binding protein, putative, expressed	chr2	23974609	23979017	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g39629	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr4	23430915	23438759	+	CDS,three_prime_UTR
3	LOC_Os01g38990	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr1	21916921	21920665	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g28690	expressed protein	gene	expressed protein	chr8	17515652	17520400	-	three_prime_UTR,CDS
3	LOC_Os04g56350	nucleolar protein,Nop52 containing protein, expressed	gene	nucleolar protein,Nop52 containing protein, expressed	chr4	33404716	33406725	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g49380	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr6	29916714	29923542	-	CDS,three_prime_UTR
3	LOC_Os08g43960	carrier, putative, expressed	gene	carrier, putative, expressed	chr8	27687340	27688056	+	CDS,promoter,downstream
3	LOC_Os09g35920	mediator of RNA polymerase II transcription subunit 10, putative, expressed	gene	mediator of RNA polymerase II transcription subunit 10, putative, expressed	chr9	20673350	20678159	-	three_prime_UTR
3	LOC_Os01g61230	dihydroflavonol-4-reductase, putative, expressed	gene	dihydroflavonol-4-reductase, putative, expressed	chr1	35429813	35431842	+	CDS
3	LOC_Os04g45200	DNA binding protein, putative, expressed	gene	DNA binding protein, putative, expressed	chr4	26531295	26534382	-	CDS
3	LOC_Os01g01800	expressed protein	gene	expressed protein	chr1	421462	430692	+	CDS
3	LOC_Os01g33684	disease resistance RPP13-like protein 1, putative, expressed	gene	disease resistance RPP13-like protein 1, putative, expressed	chr1	18530856	18539774	-	three_prime_UTR
3	LOC_Os02g06480	SCO1 protein homolog, mitochondrial precursor, putative, expressed	gene	SCO1 protein homolog, mitochondrial precursor, putative, expressed	chr2	3227506	3233932	-	CDS
3	LOC_Os02g20970	C2 domain containing protein, putative, expressed	gene	C2 domain containing protein, putative, expressed	chr2	12398417	12404921	-	CDS
3	LOC_Os02g42200	transcription factor-related, putative, expressed	gene	transcription factor-related, putative, expressed	chr2	25373910	25386942	-	CDS
3	LOC_Os11g14420	inactive receptor kinase At1g27190 precursor, putative, expressed	gene	inactive receptor kinase At1g27190 precursor, putative, expressed	chr11	8091614	8095342	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g03870	OsFBX353 - F-box domain containing protein, expressed	gene	OsFBX353 - F-box domain containing protein, expressed	chr10	1754439	1757046	-	CDS
3	LOC_Os10g30640	translin, putative, expressed	gene	translin, putative, expressed	chr10	15875027	15878858	+	CDS
3	LOC_Os10g42820	early-responsive to dehydration protein-related, putative, expressed	gene	early-responsive to dehydration protein-related, putative, expressed	chr10	23016570	23021892	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g47030	expressed protein	gene	expressed protein	chr7	28100288	28108593	-	CDS,three_prime_UTR
3	LOC_Os06g04370	expressed protein	gene	expressed protein	chr6	1863516	1867212	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g41770	uncharacterized protein PA4923, putative	gene	uncharacterized protein PA4923, putative	chr2	25103805	25107307	+	CDS,promoter
3	LOC_Os09g36650	expressed protein	gene	expressed protein	chr9	21145536	21148594	+	CDS,downstream
3	LOC_Os02g05720	pentatricopeptide repeat protein PPR986-12, putative, expressed	gene	pentatricopeptide repeat protein PPR986-12, putative, expressed	chr2	2812235	2816191	+	CDS,downstream
3	LOC_Os04g41980	ATOZI1, putative, expressed	gene	ATOZI1, putative, expressed	chr4	24688882	24690838	+	three_prime_UTR,downstream
3	LOC_Os03g49430	pre-mRNA-splicing factor, putative, expressed	gene	pre-mRNA-splicing factor, putative, expressed	chr3	28131927	28135008	-	three_prime_UTR,CDS,promoter
3	LOC_Os01g40340	SIT4 phosphatase-associated protein domain containing protein, expressed	gene	SIT4 phosphatase-associated protein domain containing protein, expressed	chr1	22775902	22781743	+	CDS,three_prime_UTR
3	LOC_Os08g23140	expressed protein	gene	expressed protein	chr8	13941117	13947993	+	CDS
3	LOC_Os03g47760	SAB, putative, expressed	gene	SAB, putative, expressed	chr3	27093505	27103902	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g34220	omega-6 fatty acid desaturase, chloroplast precursor, putative, expressed	gene	omega-6 fatty acid desaturase, chloroplast precursor, putative, expressed	chr8	21448249	21453256	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g45180	expressed protein	gene	expressed protein	chr3	25510217	25515361	-	CDS,downstream
3	LOC_Os12g31830	nitrilase, putative, expressed	gene	nitrilase, putative, expressed	chr12	19122626	19127641	+	CDS,three_prime_UTR
3	LOC_Os10g07994	autophagy protein 9, putative, expressed	gene	autophagy protein 9, putative, expressed	chr10	4297538	4303112	-	CDS
3	LOC_Os09g24540	peptidyl-prolyl cis-trans isomerase, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, putative, expressed	chr9	14609698	14612280	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g56320	OsSub4 - Putative Subtilisin homologue, expressed	gene	OsSub4 - Putative Subtilisin homologue, expressed	chr1	32449825	32455532	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g03020	lectin-like receptor kinase 1, putative, expressed	gene	lectin-like receptor kinase 1, putative, expressed	chr8	1339790	1342399	-	CDS
3	LOC_Os03g07290	structural constituent of ribosome, putative, expressed	gene	structural constituent of ribosome, putative, expressed	chr3	3710102	3712268	+	CDS,three_prime_UTR
3	LOC_Os07g08660	40S ribosomal protein S15, putative, expressed	gene	40S ribosomal protein S15, putative, expressed	chr7	4459537	4461631	-	three_prime_UTR,promoter
3	LOC_Os11g03730	alpha-N-arabinofuranosidase A, putative, expressed	gene	alpha-N-arabinofuranosidase A, putative, expressed	chr11	1452503	1459065	+	CDS,three_prime_UTR
3	LOC_Os09g20030	disease resistance RPP13-like protein 1, putative, expressed	gene	disease resistance RPP13-like protein 1, putative, expressed	chr9	11997383	12000238	+	CDS,three_prime_UTR
3	LOC_Os01g42280	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr1	23968713	23971267	+	CDS
3	LOC_Os10g05720	LTPL37 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	gene	LTPL37 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	chr10	2884270	2885556	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g38980	tRNA synthetases class II domain containing protein, expressed	gene	tRNA synthetases class II domain containing protein, expressed	chr3	21663724	21672103	-	CDS,three_prime_UTR
3	LOC_Os04g58610	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr4	34667858	34669779	-	CDS,downstream
3	LOC_Os02g49600	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	gene	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	chr2	30310272	30314072	-	three_prime_UTR,promoter
3	LOC_Os09g33510	hydroxyproline-rich glycoprotein family protein, putative, expressed	gene	hydroxyproline-rich glycoprotein family protein, putative, expressed	chr9	19759987	19765984	+	CDS,three_prime_UTR
3	LOC_Os01g35184	CAMK_KIN1/SNF1/Nim1_like.10 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_KIN1/SNF1/Nim1_like.10 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr1	19468217	19476561	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g34490	hypothetical protein	gene	hypothetical protein	chr5	20385681	20387671	-	CDS,promoter
3	LOC_Os11g28300	uncharacterized protein family UPF0016 domain containing protein, expressed	gene	uncharacterized protein family UPF0016 domain containing protein, expressed	chr11	15810187	15814808	+	CDS,three_prime_UTR
3	LOC_Os03g36930	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr3	20490889	20495422	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g08480	ubiquitin fusion degradation protein, putative, expressed	gene	ubiquitin fusion degradation protein, putative, expressed	chr2	4563047	4566683	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g48820	DDT, putative, expressed	gene	DDT, putative, expressed	chr5	27913012	27923727	-	CDS
3	LOC_Os12g06480	PHD-finger family protein, expressed	gene	PHD-finger family protein, expressed	chr12	3117030	3123782	-	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os11g40500	OsSigP7 - Putative Type I Signal Peptidase homologue; employs a putative Ser/Lys catalytic dyad, expressed	gene	OsSigP7 - Putative Type I Signal Peptidase homologue; employs a putative Ser/Lys catalytic dyad, expressed	chr11	23700297	23703491	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g24940	poly synthetase 2-A, putative, expressed	gene	poly synthetase 2-A, putative, expressed	chr1	14046775	14053884	+	CDS,three_prime_UTR
3	LOC_Os07g12630	transcription elongation factor protein, putative, expressed	gene	transcription elongation factor protein, putative, expressed	chr7	7223598	7227248	-	CDS,downstream
3	LOC_Os02g45480	nucleic acid binding protein, putative, expressed	gene	nucleic acid binding protein, putative, expressed	chr2	27656549	27661487	+	three_prime_UTR,CDS,downstream
3	LOC_Os02g06010	integral membrane protein, putative, expressed	gene	integral membrane protein, putative, expressed	chr2	2995483	2999836	+	three_prime_UTR,downstream
3	LOC_Os03g12370	HSF-type DNA-binding domain containing protein, expressed	gene	HSF-type DNA-binding domain containing protein, expressed	chr3	6536569	6540400	+	CDS,three_prime_UTR
3	LOC_Os11g06230	expressed protein	gene	expressed protein	chr11	2974332	2977465	+	CDS,downstream
3	LOC_Os07g37770	ribosomal protein S17, putative, expressed	gene	ribosomal protein S17, putative, expressed	chr7	22647566	22655469	-	CDS,downstream
3	LOC_Os10g27230	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	gene	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	chr10	14285713	14291210	-	CDS,three_prime_UTR
3	LOC_Os11g01600	macrophage migration inhibitory factor, putative, expressed	gene	macrophage migration inhibitory factor, putative, expressed	chr11	351202	354323	+	three_prime_UTR,CDS,promoter
3	LOC_Os07g44620	eukaryotic translation initiation factor 6, putative, expressed	gene	eukaryotic translation initiation factor 6, putative, expressed	chr7	26627445	26630269	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g49010	ORC4 - Putative origin recognition complex subunit 4, expressed	gene	ORC4 - Putative origin recognition complex subunit 4, expressed	chr1	28160688	28165071	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g15040	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr5	8526331	8535139	-	CDS,three_prime_UTR
3	LOC_Os11g06650	transcription elongation factor protein, putative, expressed	gene	transcription elongation factor protein, putative, expressed	chr11	3229614	3232449	-	CDS
3	LOC_Os01g19140	O-sialoglycoprotein endopeptidase, putative, expressed	gene	O-sialoglycoprotein endopeptidase, putative, expressed	chr1	10812973	10817506	-	three_prime_UTR,downstream
3	LOC_Os04g45860	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr4	26969209	26973669	-	CDS
3	LOC_Os07g31380	NAD-dependent malic enzyme, mitochondrial precursor, putative, expressed	gene	NAD-dependent malic enzyme, mitochondrial precursor, putative, expressed	chr7	18586321	18595130	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g02050	SNF2 family N-terminal domain containing protein, expressed	gene	SNF2 family N-terminal domain containing protein, expressed	chr2	573100	589743	-	CDS,three_prime_UTR
3	LOC_Os01g43372	expressed protein	gene	expressed protein	chr1	24810026	24811966	+	CDS,downstream
3	LOC_Os09g32610	expressed protein	gene	expressed protein	chr9	19458542	19462314	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g35710	cycloartenol synthase, putative, expressed	gene	cycloartenol synthase, putative, expressed	chr11	20476318	20493605	+	CDS
3	LOC_Os12g43520	cbbY protein-related, putative, expressed	gene	cbbY protein-related, putative, expressed	chr12	26963912	26968139	-	CDS,downstream
3	LOC_Os04g51610	calcium-transporting ATPase, plasma membrane-type, putative, expressed	gene	calcium-transporting ATPase, plasma membrane-type, putative, expressed	chr4	30386970	30399183	-	CDS,three_prime_UTR
3	LOC_Os09g36710	peptidase, T1 family, putative, expressed	gene	peptidase, T1 family, putative, expressed	chr9	21171172	21173586	+	CDS,downstream
3	LOC_Os11g02180	dual specificity protein phosphatase, putative, expressed	gene	dual specificity protein phosphatase, putative, expressed	chr11	601270	605844	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g40250	expressed protein	gene	expressed protein	chr10	21486636	21491899	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g55490	transcriptional regulator family protein, putative, expressed	gene	transcriptional regulator family protein, putative, expressed	chr1	31968249	31973131	+	CDS
3	LOC_Os10g34390	expressed protein	gene	expressed protein	chr10	18261407	18268535	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g55799	exo70 exocyst complex subunit domain containing protein, expressed	gene	exo70 exocyst complex subunit domain containing protein, expressed	chr1	32136322	32142391	+	CDS,promoter
3	LOC_Os12g04180	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr12	1754561	1758698	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g05069	lysosomal alpha-mannosidase precursor, putative, expressed	gene	lysosomal alpha-mannosidase precursor, putative, expressed	chr10	2476183	2488756	+	CDS
3	LOC_Os04g32000	expressed protein	gene	expressed protein	chr4	18986640	18989832	+	three_prime_UTR
3	LOC_Os11g14110	rust resistance protein, putative, expressed	gene	rust resistance protein, putative, expressed	chr11	7855845	7860388	+	three_prime_UTR,promoter
3	LOC_Os01g46710	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr1	26600860	26607432	-	CDS,three_prime_UTR
3	LOC_Os11g11580	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr11	6436071	6445281	+	CDS
3	LOC_Os04g45610	expressed protein	gene	expressed protein	chr4	26792992	26797045	-	CDS,three_prime_UTR
3	LOC_Os05g51470	2-aminoethanethiol dioxygenase, putative, expressed	gene	2-aminoethanethiol dioxygenase, putative, expressed	chr5	29444332	29447327	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g64650	VAMP-like protein YKT62, putative, expressed	gene	VAMP-like protein YKT62, putative, expressed	chr1	37513720	37517554	+	three_prime_UTR,promoter
3	LOC_Os11g37980	GAUT2/LGT2, putative, expressed	gene	GAUT2/LGT2, putative, expressed	chr11	22048058	22051982	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g03574	expressed protein	gene	expressed protein	chr5	1515556	1520704	+	five_prime_UTR,CDS
3	LOC_Os05g38610	clathrin adaptor complex small chain domain containing protein, expressed	gene	clathrin adaptor complex small chain domain containing protein, expressed	chr5	22579068	22581822	-	CDS,three_prime_UTR
3	LOC_Os05g25320	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr5	14644382	14647683	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g02110	Alg9-like mannosyltransferase protein, putative, expressed	gene	Alg9-like mannosyltransferase protein, putative, expressed	chr2	623174	628425	+	three_prime_UTR,downstream
3	LOC_Os03g07994	expressed protein	gene	expressed protein	chr3	4085993	4088780	-	three_prime_UTR,promoter
3	LOC_Os05g50190	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr5	28697507	28701241	-	CDS
3	LOC_Os01g54620	CESA4 - cellulose synthase, expressed	gene	CESA4 - cellulose synthase, expressed	chr1	31421902	31427644	+	CDS,downstream
3	LOC_Os02g44104	F-box family protein, putative, expressed	gene	F-box family protein, putative, expressed	chr2	26622195	26626241	-	three_prime_UTR,CDS,promoter
3	LOC_Os02g52920	emp24/gp25L/p24 family protein, putative, expressed	gene	emp24/gp25L/p24 family protein, putative, expressed	chr2	32347379	32350628	-	CDS,promoter
3	LOC_Os08g43680	glutathione S-transferase, C-terminal domain containing protein, expressed	gene	glutathione S-transferase, C-terminal domain containing protein, expressed	chr8	27606632	27612217	+	CDS,promoter
3	LOC_Os10g02970	Leucine rich repeat N-terminal domain containing protein, putative, expressed	gene	Leucine rich repeat N-terminal domain containing protein, putative, expressed	chr10	1222533	1226038	-	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os12g01620	expressed protein	gene	expressed protein	chr12	373598	378382	-	CDS,three_prime_UTR
3	LOC_Os11g36790	OsFBO6 - F-box and other domain containing protein, expressed	gene	OsFBO6 - F-box and other domain containing protein, expressed	chr11	21253207	21258083	+	CDS,three_prime_UTR
3	LOC_Os01g72990	expressed protein	gene	expressed protein	chr1	42335173	42348355	-	CDS
3	LOC_Os09g34060	transcription factor RF2a, putative, expressed	gene	transcription factor RF2a, putative, expressed	chr9	20093641	20098172	-	CDS
3	LOC_Os02g35600	PHD finger protein, putative, expressed	gene	PHD finger protein, putative, expressed	chr2	21408016	21411353	+	CDS,promoter
3	LOC_Os05g49200	aspartic proteinase oryzasin-1 precursor, putative, expressed	gene	aspartic proteinase oryzasin-1 precursor, putative, expressed	chr5	28169043	28174843	+	CDS
3	LOC_Os06g21340	rho GDP-dissociation inhibitor 1, putative, expressed	gene	rho GDP-dissociation inhibitor 1, putative, expressed	chr6	12321864	12325084	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g33280	expressed protein	gene	expressed protein	chr4	19952637	19959264	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g42950	haloacid dehalogenase-like hydrolase family protein, putative, expressed	gene	haloacid dehalogenase-like hydrolase family protein, putative, expressed	chr8	27139546	27142255	+	CDS,three_prime_UTR
3	LOC_Os06g21120	expressed protein	gene	expressed protein	chr6	12196451	12199663	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g18890	HNH endonuclease domain-containing protein, putative, expressed	gene	HNH endonuclease domain-containing protein, putative, expressed	chr10	9553528	9557382	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g22500	craniofacial development protein 1, putative, expressed	gene	craniofacial development protein 1, putative, expressed	chr1	12645560	12648988	+	CDS,three_prime_UTR
3	LOC_Os01g48220	protein of unknown function DUF1421 domain containing protein, expressed	gene	protein of unknown function DUF1421 domain containing protein, expressed	chr1	27629978	27632523	-	three_prime_UTR,promoter
3	LOC_Os05g49170	cold acclimation protein WCOR413, putative, expressed	gene	cold acclimation protein WCOR413, putative, expressed	chr5	28151163	28153400	-	CDS
3	LOC_Os05g02260	expressed protein	gene	expressed protein	chr5	719132	721868	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g33040	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr6	19230191	19233812	-	CDS,three_prime_UTR
3	LOC_Os02g45980	ZR1 protein, putative, expressed	gene	ZR1 protein, putative, expressed	chr2	28008953	28014945	+	CDS
3	LOC_Os09g33600	ARF GTPase-activating domain-containing protein, putative, expressed	gene	ARF GTPase-activating domain-containing protein, putative, expressed	chr9	19823228	19830851	-	CDS,three_prime_UTR
3	LOC_Os01g35930	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr1	19883209	19885307	+	CDS,promoter
3	LOC_Os03g04270	OsFBL10 - F-box domain and LRR containing protein, expressed	gene	OsFBL10 - F-box domain and LRR containing protein, expressed	chr3	1955855	1958795	-	CDS,three_prime_UTR
3	LOC_Os03g03140	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr3	1321547	1323483	+	CDS,promoter
3	LOC_Os06g07020	ZOS6-01 - C2H2 zinc finger protein, expressed	gene	ZOS6-01 - C2H2 zinc finger protein, expressed	chr6	3327475	3330569	+	three_prime_UTR,promoter
3	LOC_Os07g44210	SNF2 family N-terminal domain containing protein, expressed	gene	SNF2 family N-terminal domain containing protein, expressed	chr7	26415964	26428341	+	CDS,promoter
3	LOC_Os01g46700	SET domain containing protein, expressed	gene	SET domain containing protein, expressed	chr1	26590911	26598590	+	CDS
3	LOC_Os05g41890	expressed protein	gene	expressed protein	chr5	24470647	24473300	-	CDS,promoter
3	LOC_Os01g48280	ubiquitin-conjugating enzyme, putative, expressed	gene	ubiquitin-conjugating enzyme, putative, expressed	chr1	27667346	27670604	-	three_prime_UTR
3	LOC_Os01g34670	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr1	19114201	19121364	-	CDS,three_prime_UTR
3	LOC_Os10g30970	expressed protein	gene	expressed protein	chr10	16089232	16096758	-	CDS,three_prime_UTR
3	LOC_Os01g70720	expressed protein	gene	expressed protein	chr1	40936774	40939975	-	three_prime_UTR
3	LOC_Os02g31080	hydroxyproline-rich glycoprotein family protein, putative, expressed	gene	hydroxyproline-rich glycoprotein family protein, putative, expressed	chr2	18569164	18575824	-	CDS,three_prime_UTR
3	LOC_Os04g40150	glycosyl transferase family 17 protein, putative, expressed	gene	glycosyl transferase family 17 protein, putative, expressed	chr4	23707541	23711334	-	CDS,three_prime_UTR
3	LOC_Os01g11570	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr1	6241495	6243969	-	CDS,three_prime_UTR
3	LOC_Os09g36760	DUF630/DUF632 domains containing protein, putative, expressed	gene	DUF630/DUF632 domains containing protein, putative, expressed	chr9	21208374	21212687	+	CDS,downstream
3	LOC_Os12g25630	sulfite oxidase, putative, expressed	gene	sulfite oxidase, putative, expressed	chr12	14824653	14827948	-	CDS,three_prime_UTR
3	LOC_Os01g43080	exonuclease, putative, expressed	gene	exonuclease, putative, expressed	chr1	24574259	24575815	-	three_prime_UTR,promoter
3	LOC_Os06g05110	superoxide dismutase, chloroplast, putative, expressed	gene	superoxide dismutase, chloroplast, putative, expressed	chr6	2255855	2260001	+	three_prime_UTR,downstream
3	LOC_Os03g47800	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr3	27127218	27131780	-	three_prime_UTR,promoter
3	LOC_Os04g10650	CDT1A - Putative DNA replication initiation protein, expressed	gene	CDT1A - Putative DNA replication initiation protein, expressed	chr4	5781017	5783953	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g15020	beta-galactosidase precursor, putative, expressed	gene	beta-galactosidase precursor, putative, expressed	chr3	8194884	8201106	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g06540	expressed protein	gene	expressed protein	chr8	3696396	3697247	+	three_prime_UTR,promoter,downstream
3	LOC_Os03g17930	alpha-taxilin, putative, expressed	gene	alpha-taxilin, putative, expressed	chr3	9986096	9989324	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g26450	F-actin-capping protein subunit beta, putative, expressed	gene	F-actin-capping protein subunit beta, putative, expressed	chr3	15113737	15116992	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g43404	expressed protein	gene	expressed protein	chr11	25731968	25734428	+	three_prime_UTR
3	LOC_Os10g21940	expressed protein	gene	expressed protein	chr10	11233811	11245890	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g26870	oxidoreductase, aldo/keto reductase family protein, putative, expressed	gene	oxidoreductase, aldo/keto reductase family protein, putative, expressed	chr4	15716848	15721946	+	CDS,promoter
3	LOC_Os05g23860	rab GDP dissociation inhibitor alpha, putative, expressed	gene	rab GDP dissociation inhibitor alpha, putative, expressed	chr5	13658418	13663498	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g09820	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr2	5063134	5066802	+	three_prime_UTR
3	LOC_Os08g38610	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr8	24399472	24403424	+	CDS
3	LOC_Os01g12720	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr1	7037103	7041925	+	CDS
3	LOC_Os05g31062	DNAJ heat shock N-terminal domain-containing protein, putative, expressed	gene	DNAJ heat shock N-terminal domain-containing protein, putative, expressed	chr5	17992058	17995879	+	CDS,three_prime_UTR
3	LOC_Os01g65520	Sad1 / UNC-like C-terminal domain containing protein, putative, expressed	gene	Sad1 / UNC-like C-terminal domain containing protein, putative, expressed	chr1	38025502	38029309	-	CDS,three_prime_UTR
3	LOC_Os12g41490	cysteine-rich receptor-like protein kinase 8 precursor, putative, expressed	gene	cysteine-rich receptor-like protein kinase 8 precursor, putative, expressed	chr12	25666158	25668950	+	three_prime_UTR,downstream
3	LOC_Os07g12770	transmembrane amino acid transporter protein, putative, expressed	gene	transmembrane amino acid transporter protein, putative, expressed	chr7	7309217	7312083	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g35170	tRNA methyltransferase, putative, expressed	gene	tRNA methyltransferase, putative, expressed	chr1	19465229	19467980	+	three_prime_UTR,downstream
3	LOC_Os01g09120	Twin LOV 1, putative, expressed	gene	Twin LOV 1, putative, expressed	chr1	4580148	4583690	-	CDS,three_prime_UTR
3	LOC_Os03g17010	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr3	9448241	9452039	-	three_prime_UTR,promoter
3	LOC_Os02g47580	expressed protein	gene	expressed protein	chr2	29066543	29070619	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g42480	receptor-like protein kinase At3g46290 precursor, putative, expressed	gene	receptor-like protein kinase At3g46290 precursor, putative, expressed	chr4	24955071	24960019	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os02g05920	phytosulfokine receptor precursor, putative, expressed	gene	phytosulfokine receptor precursor, putative, expressed	chr2	2938044	2941646	-	CDS,downstream
3	LOC_Os04g17700	kinesin heavy chain isolog, putative, expressed	gene	kinesin heavy chain isolog, putative, expressed	chr4	9685798	9694263	+	CDS
3	LOC_Os02g54000	mRNA cap guanine-N7 methyltransferase 2, putative, expressed	gene	mRNA cap guanine-N7 methyltransferase 2, putative, expressed	chr2	33067266	33071310	+	CDS,three_prime_UTR,promoter
3	LOC_Os10g32690	expressed protein	gene	expressed protein	chr10	17045074	17049817	+	three_prime_UTR,downstream
3	LOC_Os05g38950	TBC domain containing protein, expressed	gene	TBC domain containing protein, expressed	chr5	22772388	22779502	-	CDS,three_prime_UTR
3	LOC_Os02g14130	CGMC_GSK.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	gene	CGMC_GSK.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	chr2	7718902	7723686	-	CDS,three_prime_UTR
3	LOC_Os01g62890	prenylated rab acceptor, putative, expressed	gene	prenylated rab acceptor, putative, expressed	chr1	36418981	36421850	-	CDS,three_prime_UTR
3	LOC_Os02g55729	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	34122248	34125907	+	CDS
3	LOC_Os11g26030	GTPase of unknown function domain containing protein, putative, expressed	gene	GTPase of unknown function domain containing protein, putative, expressed	chr11	14420016	14426888	+	CDS
3	LOC_Os08g42610	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr8	26929597	26932545	-	CDS,promoter
3	LOC_Os05g06440	dnaJ homolog subfamily B member 11 precursor, putative, expressed	gene	dnaJ homolog subfamily B member 11 precursor, putative, expressed	chr5	3303173	3307689	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g58020	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr2	35511662	35517489	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g10520	OsMADS33 - MADS-box family gene with MIKCc type-box, expressed	gene	OsMADS33 - MADS-box family gene with MIKCc type-box, expressed	chr12	5568419	5572012	-	CDS,downstream
3	LOC_Os06g05830	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr6	2659851	2662465	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g08270	ataxin-2 C-terminal region family protein, expressed	gene	ataxin-2 C-terminal region family protein, expressed	chr3	4202314	4209307	+	CDS,downstream
3	LOC_Os04g56750	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	gene	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	chr4	33663503	33668885	-	CDS
3	LOC_Os10g24094	expressed protein	gene	expressed protein	chr10	12269424	12274851	-	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os12g29290	disease resistance protein RGA3, putative, expressed	gene	disease resistance protein RGA3, putative, expressed	chr12	17356919	17359483	+	five_prime_UTR,CDS,promoter,downstream
3	LOC_Os12g13340	expressed protein	gene	expressed protein	chr12	7438434	7443509	-	CDS,three_prime_UTR
3	LOC_Os12g03060	expressed protein	gene	expressed protein	chr12	1150579	1154729	-	CDS
3	LOC_Os02g22060	expressed protein	gene	expressed protein	chr2	13119911	13127565	-	CDS,three_prime_UTR
3	LOC_Os05g34050	bZIP transcription factor domain containing protein, expressed	gene	bZIP transcription factor domain containing protein, expressed	chr5	20050275	20054578	-	CDS,three_prime_UTR
3	LOC_Os01g02090	expressed protein	gene	expressed protein	chr1	587863	592759	+	three_prime_UTR,CDS
3	LOC_Os06g09420	B3 DNA binding domain containing protein, expressed	gene	B3 DNA binding domain containing protein, expressed	chr6	4761005	4763619	+	three_prime_UTR
3	LOC_Os09g08660	4-nitrophenylphosphatase, putative, expressed	gene	4-nitrophenylphosphatase, putative, expressed	chr9	4533955	4542655	-	CDS,three_prime_UTR
3	LOC_Os02g36960	choline transporter-related, putative, expressed	gene	choline transporter-related, putative, expressed	chr2	22321425	22325936	-	CDS,three_prime_UTR
3	LOC_Os03g51870	FHA domain containing protein, putative, expressed	gene	FHA domain containing protein, putative, expressed	chr3	29734686	29738331	+	three_prime_UTR,downstream
3	LOC_Os03g44010	nucleolar protein NOP5, putative, expressed	gene	nucleolar protein NOP5, putative, expressed	chr3	24725430	24730408	+	three_prime_UTR
3	LOC_Os03g51840	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr3	29723384	29725439	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g58440	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	gene	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	chr2	35733113	35737451	+	CDS,three_prime_UTR
3	LOC_Os01g64520	uricase, putative, expressed	gene	uricase, putative, expressed	chr1	37439386	37443828	-	CDS,three_prime_UTR
3	LOC_Os01g42040	ubiquitin-conjugating enzyme, putative, expressed	gene	ubiquitin-conjugating enzyme, putative, expressed	chr1	23842230	23845837	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os11g04104	major facilitator superfamily antiporter, putative, expressed	gene	major facilitator superfamily antiporter, putative, expressed	chr11	1656864	1667363	-	CDS,three_prime_UTR
3	LOC_Os01g61640	NLI interacting factor-like phosphatase, putative, expressed	gene	NLI interacting factor-like phosphatase, putative, expressed	chr1	35660037	35662862	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g11700	PPR repeat containing protein	gene	PPR repeat containing protein	chr5	6647079	6648266	+	CDS,downstream
3	LOC_Os03g48030	integral membrane HPP family protein, putative, expressed	gene	integral membrane HPP family protein, putative, expressed	chr3	27293780	27296204	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g08660	aquaporin protein, putative, expressed	gene	aquaporin protein, putative, expressed	chr1	4312645	4314834	-	CDS,three_prime_UTR
3	LOC_Os06g28740	expressed protein	gene	expressed protein	chr6	16362081	16365465	-	CDS,three_prime_UTR
3	LOC_Os01g63810	starch binding domain containing protein, putative, expressed	gene	starch binding domain containing protein, putative, expressed	chr1	37020445	37023088	+	three_prime_UTR,promoter,downstream
3	LOC_Os11g05562	40S ribosomal protein S25, putative, expressed	gene	40S ribosomal protein S25, putative, expressed	chr11	2518087	2524081	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g28900	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr7	16941192	16945839	-	CDS
3	LOC_Os02g39764	expressed protein	gene	expressed protein	chr2	24019287	24026406	-	five_prime_UTR
3	LOC_Os09g38710	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr9	22247967	22253928	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g36940	OsFBX13 - F-box domain containing protein, expressed	gene	OsFBX13 - F-box domain containing protein, expressed	chr1	20594147	20597807	+	CDS,three_prime_UTR
3	LOC_Os10g13940	MATE efflux protein, putative, expressed	gene	MATE efflux protein, putative, expressed	chr10	7589648	7595499	+	CDS
3	LOC_Os01g42140	expressed protein	gene	expressed protein	chr1	23885799	23887178	-	three_prime_UTR,promoter
3	LOC_Os01g61810	histone-like transcription factor and archaeal histone, putative, expressed	gene	histone-like transcription factor and archaeal histone, putative, expressed	chr1	35755291	35757627	-	three_prime_UTR,promoter,downstream
3	LOC_Os07g27180	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr7	15767899	15786364	-	CDS,three_prime_UTR
3	LOC_Os09g14540	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr9	8602008	8608483	-	CDS,three_prime_UTR
3	LOC_Os07g07974	tesmin/TSO1-like CXC domain containing protein, expressed	gene	tesmin/TSO1-like CXC domain containing protein, expressed	chr7	4019266	4026485	+	CDS,three_prime_UTR
3	LOC_Os07g42400	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr7	25371000	25375171	+	CDS,three_prime_UTR,promoter
3	LOC_Os02g35590	glutathione S-transferase, putative, expressed	gene	glutathione S-transferase, putative, expressed	chr2	21404863	21407815	-	CDS,three_prime_UTR
3	LOC_Os05g29920	expressed protein	gene	expressed protein	chr5	17255377	17256631	+	three_prime_UTR,downstream
3	LOC_Os12g38380	tetratricopeptide repeat containing protein, putative, expressed	gene	tetratricopeptide repeat containing protein, putative, expressed	chr12	23511823	23521005	+	CDS
3	LOC_Os02g02750	CDP-alcohol phosphatidyltransferase, putative, expressed	gene	CDP-alcohol phosphatidyltransferase, putative, expressed	chr2	1040528	1046183	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g60350	leaf senescence related protein, putative, expressed	gene	leaf senescence related protein, putative, expressed	chr3	34313063	34318251	-	CDS,three_prime_UTR
3	LOC_Os02g54980	pheophorbide a oxygenase, chloroplast precursor, putative, expressed	gene	pheophorbide a oxygenase, chloroplast precursor, putative, expressed	chr2	33682481	33684619	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g33770	homeodomain, putative, expressed	gene	homeodomain, putative, expressed	chr2	20141998	20144142	+	three_prime_UTR,downstream
3	LOC_Os07g49480	KIP1, putative, expressed	gene	KIP1, putative, expressed	chr7	29632593	29637371	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g32374	histone deacetylase 6, putative, expressed	gene	histone deacetylase 6, putative, expressed	chr12	19503397	19506284	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g72860	MAC/Perforin domain containing protein, putative, expressed	gene	MAC/Perforin domain containing protein, putative, expressed	chr1	42259251	42263898	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g51180	hyaluronan/mRNA binding family domain containing protein, expressed	gene	hyaluronan/mRNA binding family domain containing protein, expressed	chr5	29293328	29296564	+	CDS
3	LOC_Os08g25080	expressed protein	gene	expressed protein	chr8	15224595	15228081	+	CDS,three_prime_UTR
3	LOC_Os05g24550	Papain family cysteine protease domain containing protein, expressed	gene	Papain family cysteine protease domain containing protein, expressed	chr5	14103930	14109829	+	CDS,three_prime_UTR
3	LOC_Os10g27980	transmembrane amino acid transporter protein, putative, expressed	gene	transmembrane amino acid transporter protein, putative, expressed	chr10	14427297	14429522	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g46560	seven in absentia protein family domain containing protein, expressed	gene	seven in absentia protein family domain containing protein, expressed	chr7	27806724	27810540	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g27990	STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed	gene	STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed	chr3	16071479	16077544	-	CDS
3	LOC_Os01g10690	POLD3 - Putative DNA polymerase delta complex subunit, expressed	gene	POLD3 - Putative DNA polymerase delta complex subunit, expressed	chr1	5717883	5723184	-	CDS,three_prime_UTR
3	LOC_Os09g39500	ubiquitin fusion protein, putative, expressed	gene	ubiquitin fusion protein, putative, expressed	chr9	22692186	22694404	+	CDS,three_prime_UTR,promoter
3	LOC_Os05g41930	N-rich protein, putative, expressed	gene	N-rich protein, putative, expressed	chr5	24489819	24492588	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g16620	reticulon domain containing protein, putative, expressed	gene	reticulon domain containing protein, putative, expressed	chr2	9497685	9500455	+	CDS,three_prime_UTR
3	LOC_Os09g15170	nucleobase-ascorbate transporter, putative, expressed	gene	nucleobase-ascorbate transporter, putative, expressed	chr9	9205557	9210739	+	CDS,three_prime_UTR
3	LOC_Os08g25570	histone deacetylase, putative, expressed	gene	histone deacetylase, putative, expressed	chr8	15551425	15556438	+	CDS,three_prime_UTR
3	LOC_Os05g11260	expressed protein	gene	expressed protein	chr5	6358038	6362346	-	CDS
3	LOC_Os03g51930	expressed protein	gene	expressed protein	chr3	29781501	29784250	-	CDS,three_prime_UTR
3	LOC_Os08g29160	5-AMP-activated protein kinase beta-1 subunit-related, putative, expressed	gene	5-AMP-activated protein kinase beta-1 subunit-related, putative, expressed	chr8	17849191	17855012	+	CDS,three_prime_UTR,promoter
3	LOC_Os09g36750	L-ascorbate peroxidase 4, putative, expressed	gene	L-ascorbate peroxidase 4, putative, expressed	chr9	21199250	21202282	-	five_prime_UTR,CDS
3	LOC_Os03g61700	expressed protein	gene	expressed protein	chr3	34958362	34965618	+	CDS,three_prime_UTR,promoter
3	LOC_Os08g31470	peptidase, trypsin-like serine and cysteine proteases, putative, expressed	gene	peptidase, trypsin-like serine and cysteine proteases, putative, expressed	chr8	19461213	19466634	+	CDS,three_prime_UTR
3	LOC_Os05g05590	transporter, monovalent cation:proton antiporter-2 family, putative, expressed	gene	transporter, monovalent cation:proton antiporter-2 family, putative, expressed	chr5	2777335	2783522	-	CDS,three_prime_UTR
3	LOC_Os11g32870	hypothetical protein	gene	hypothetical protein	chr11	18950141	18953867	+	CDS,promoter,downstream
3	LOC_Os05g15140	expressed protein	gene	expressed protein	chr5	8584489	8589414	-	CDS
3	LOC_Os06g04640	bromodomain domain containing protein, expressed	gene	bromodomain domain containing protein, expressed	chr6	2022358	2027657	+	CDS,three_prime_UTR
3	LOC_Os05g43490	OsFBX169 - F-box domain containing protein, expressed	gene	OsFBX169 - F-box domain containing protein, expressed	chr5	25220529	25224116	+	three_prime_UTR
3	LOC_Os12g32590	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr12	19634577	19639227	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os07g08320	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr7	4252897	4258356	-	CDS
3	LOC_Os02g06720	WD domain containing protein, putative, expressed	gene	WD domain containing protein, putative, expressed	chr2	3362045	3369517	-	CDS,three_prime_UTR
3	LOC_Os02g43750	transcription initiation factor, putative, expressed	gene	transcription initiation factor, putative, expressed	chr2	26390084	26397394	-	CDS,promoter
3	LOC_Os02g58120	oxidoreductase/ transition metal ion binding protein, putative, expressed	gene	oxidoreductase/ transition metal ion binding protein, putative, expressed	chr2	35561851	35564547	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g06270	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr5	3189771	3195747	-	CDS,three_prime_UTR
3	LOC_Os06g07987	exostosin family protein, putative	gene	exostosin family protein, putative	chr6	3871356	3873570	-	CDS,promoter
3	LOC_Os04g24550	ATP-binding region, ATPase-like domain containing protein, expressed	gene	ATP-binding region, ATPase-like domain containing protein, expressed	chr4	14076101	14085810	+	CDS
3	LOC_Os06g40590	expressed protein	gene	expressed protein	chr6	24197172	24205084	-	three_prime_UTR,downstream
3	LOC_Os02g57980	DEAD/DEAH box helicase, putative, expressed	gene	DEAD/DEAH box helicase, putative, expressed	chr2	35496214	35501181	-	CDS,downstream
3	LOC_Os07g31440	expressed protein	gene	expressed protein	chr7	18620389	18623755	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g37640	HIT zinc finger domain containing protein, expressed	gene	HIT zinc finger domain containing protein, expressed	chr10	20069145	20073361	-	CDS
3	LOC_Os07g14590	hydrolase, putative, expressed	gene	hydrolase, putative, expressed	chr7	8320647	8324073	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g58340	oligopeptidase, putative, expressed	gene	oligopeptidase, putative, expressed	chr2	35676940	35682638	-	CDS,three_prime_UTR
3	LOC_Os10g27990	exocyst complex component 6, putative, expressed	gene	exocyst complex component 6, putative, expressed	chr10	14429566	14433009	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g52630	regulator of chromosome condensation, putative, expressed	gene	regulator of chromosome condensation, putative, expressed	chr1	30250425	30253911	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g42784	DNA mismatch repair protein, putative, expressed	gene	DNA mismatch repair protein, putative, expressed	chr4	25138504	25154893	-	CDS
3	LOC_Os03g44420	tubulin/FtsZ domain containing protein, putative, expressed	gene	tubulin/FtsZ domain containing protein, putative, expressed	chr3	24994656	24999045	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g02580	expressed protein	gene	expressed protein	chr2	934586	937786	-	CDS,three_prime_UTR
3	LOC_Os03g45194	oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed	gene	oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed	chr3	25515789	25523301	-	CDS
3	LOC_Os10g04090	disease resistance RPP13-like protein 1, putative, expressed	gene	disease resistance RPP13-like protein 1, putative, expressed	chr10	1889029	1892982	-	CDS,three_prime_UTR
3	LOC_Os12g02690	expressed protein	gene	expressed protein	chr12	939852	943058	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g46740	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr3	26438345	26441852	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os11g47650	trp repressor/replication initiator, putative, expressed	gene	trp repressor/replication initiator, putative, expressed	chr11	28251214	28254766	+	CDS
3	LOC_Os07g46600	RNA pseudouridine synthase, putative, expressed	gene	RNA pseudouridine synthase, putative, expressed	chr7	27840396	27844441	-	three_prime_UTR
3	LOC_Os09g20820	enolase, putative, expressed	gene	enolase, putative, expressed	chr9	12539618	12543906	-	CDS,downstream
3	LOC_Os11g43970	AAA-type ATPase family protein, putative, expressed	gene	AAA-type ATPase family protein, putative, expressed	chr11	26081349	26091756	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g64415	kinesin motor domain containing protein, putative	gene	kinesin motor domain containing protein, putative	chr3	36395606	36398273	-	CDS,promoter
3	LOC_Os08g19830	ubiquitin family protein, putative, expressed	gene	ubiquitin family protein, putative, expressed	chr8	11868985	11878535	-	CDS
3	LOC_Os02g39890	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr2	24094209	24097624	-	CDS,three_prime_UTR
3	LOC_Os02g24199	unknown	gene	unknown	chr2	14013548	14014606	+	three_prime_UTR,promoter,downstream
3	LOC_Os03g63260	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr3	35734661	35741043	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g12540	GTPase of unknown function domain containing protein, putative, expressed	gene	GTPase of unknown function domain containing protein, putative, expressed	chr1	6896557	6903259	+	three_prime_UTR,CDS,promoter
3	LOC_Os05g24020	emp24/gp25L/p24 family protein, putative, expressed	gene	emp24/gp25L/p24 family protein, putative, expressed	chr5	13783086	13791453	-	CDS,promoter
3	LOC_Os02g53340	cyclic nucleotide-gated ion channel, putative, expressed	gene	cyclic nucleotide-gated ion channel, putative, expressed	chr2	32642737	32653908	+	CDS
3	LOC_Os08g16480	ATPase, AFG1 family domain containing protein, expressed	gene	ATPase, AFG1 family domain containing protein, expressed	chr8	10096897	10103098	+	CDS
3	LOC_Os08g17390	expressed protein	gene	expressed protein	chr8	10629313	10633379	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g29410	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr2	17459494	17467741	-	CDS
3	LOC_Os07g30970	nucleoside diphosphate kinase, putative, expressed	gene	nucleoside diphosphate kinase, putative, expressed	chr7	18333879	18336494	-	CDS,three_prime_UTR,downstream
3	LOC_Os12g33090	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr12	19989997	19992744	+	three_prime_UTR,downstream
3	LOC_Os05g25310	acyl-CoA synthetase protein, putative, expressed	gene	acyl-CoA synthetase protein, putative, expressed	chr5	14630794	14643868	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g36740	DUF593 domain containing protein, expressed	gene	DUF593 domain containing protein, expressed	chr11	21221324	21225091	+	CDS,three_prime_UTR
3	LOC_Os07g02780	STE_MEKK_ste11_MAP3K.20 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	gene	STE_MEKK_ste11_MAP3K.20 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	chr7	1014338	1020609	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g14090	kinesin motor domain containing protein, putative, expressed	gene	kinesin motor domain containing protein, putative, expressed	chr1	7890541	7893725	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g01750	MATE efflux family protein, putative, expressed	gene	MATE efflux family protein, putative, expressed	chr7	439429	444114	-	CDS,downstream
3	LOC_Os06g06080	serine esterase family protein, putative, expressed	gene	serine esterase family protein, putative, expressed	chr6	2802004	2805287	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g08750	integral membrane transporter family protein, putative, expressed	gene	integral membrane transporter family protein, putative, expressed	chr6	4378796	4382419	-	CDS,three_prime_UTR
3	LOC_Os01g10040	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr1	5235623	5243520	+	CDS,downstream
3	LOC_Os11g37730	glutathione S-transferase, N-terminal domain containing protein, expressed	gene	glutathione S-transferase, N-terminal domain containing protein, expressed	chr11	21839554	21843963	+	CDS
3	LOC_Os11g12040	disease resistance protein RPM1, putative, expressed	gene	disease resistance protein RPM1, putative, expressed	chr11	6687778	6693319	+	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os09g26830	lung seven transmembrane domain containing protein, putative, expressed	gene	lung seven transmembrane domain containing protein, putative, expressed	chr9	16299743	16303878	-	CDS,three_prime_UTR
3	LOC_Os02g02470	oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed	gene	oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed	chr2	870724	876616	+	CDS,three_prime_UTR
3	LOC_Os07g32412	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr7	19275486	19280533	-	CDS,three_prime_UTR
3	LOC_Os07g06500	OsFBL34 - F-box domain and LRR containing protein, expressed	gene	OsFBL34 - F-box domain and LRR containing protein, expressed	chr7	3152396	3156168	-	CDS,three_prime_UTR
3	LOC_Os08g41850	expressed protein	gene	expressed protein	chr8	26427989	26430337	-	three_prime_UTR
3	LOC_Os04g31790	expressed protein	gene	expressed protein	chr4	18848438	18865759	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os05g22940	acetyl-CoA carboxylase, putative, expressed	gene	acetyl-CoA carboxylase, putative, expressed	chr5	13007093	13021023	-	CDS,three_prime_UTR
3	LOC_Os12g41500	rhodanese-like domain containing protein, putative, expressed	gene	rhodanese-like domain containing protein, putative, expressed	chr12	25667717	25673385	-	CDS,three_prime_UTR
3	LOC_Os04g12480	pumilio-family RNA binding repeat containing protein, expressed	gene	pumilio-family RNA binding repeat containing protein, expressed	chr4	6898103	6904901	-	CDS,promoter
3	LOC_Os11g31950	expressed protein	gene	expressed protein	chr11	18308696	18322548	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g08160	OsFBD6 - F-box and FBD domain containing protein, expressed	gene	OsFBD6 - F-box and FBD domain containing protein, expressed	chr2	4320543	4324166	+	CDS,three_prime_UTR
3	LOC_Os08g03670	galactosyltransferase family protein, putative, expressed	gene	galactosyltransferase family protein, putative, expressed	chr8	1743495	1748166	+	CDS,three_prime_UTR
3	LOC_Os03g03820	adenylate kinase, putative, expressed	gene	adenylate kinase, putative, expressed	chr3	1715433	1718778	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g49680	OsFBX178 - F-box domain containing protein, expressed	gene	OsFBX178 - F-box domain containing protein, expressed	chr5	28427091	28431211	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g38610	RAN guanine nucleotide release factor, putative, expressed	gene	RAN guanine nucleotide release factor, putative, expressed	chr4	22754032	22757286	-	CDS,three_prime_UTR,downstream
3	LOC_Os09g33500	transketolase, putative, expressed	gene	transketolase, putative, expressed	chr9	19752230	19758558	+	CDS
3	LOC_Os12g21700	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	gene	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	chr12	12192594	12200291	+	CDS,three_prime_UTR
3	LOC_Os11g34980	expressed protein	gene	expressed protein	chr11	20035443	20037050	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g02420	ATOZI1, putative, expressed	gene	ATOZI1, putative, expressed	chr6	831538	833916	-	three_prime_UTR,promoter
3	LOC_Os05g01590	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr5	351640	354043	+	CDS,downstream
3	LOC_Os01g57420	diacylglycerol kinase, putative, expressed	gene	diacylglycerol kinase, putative, expressed	chr1	33184286	33191935	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os08g10400	expressed protein	gene	expressed protein	chr8	6101978	6104403	-	CDS,three_prime_UTR
3	LOC_Os03g07840	adenylosuccinate synthetase, chloroplast precursor, putative, expressed	gene	adenylosuccinate synthetase, chloroplast precursor, putative, expressed	chr3	3985725	3988995	-	CDS,three_prime_UTR
3	LOC_Os06g03940	spastin, putative, expressed	gene	spastin, putative, expressed	chr6	1587474	1595160	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g40830	cullin family domain containing protein, putative, expressed	gene	cullin family domain containing protein, putative, expressed	chr4	24044086	24051766	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g38080	homeodomain-like, putative, expressed	gene	homeodomain-like, putative, expressed	chr7	22830848	22836315	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g29330	serine/threonine-protein kinase CTR1, putative, expressed	gene	serine/threonine-protein kinase CTR1, putative, expressed	chr7	17197422	17208492	-	CDS,three_prime_UTR
3	LOC_Os01g43680	CPuORF29 - conserved peptide uORF-containing transcript, expressed	gene	CPuORF29 - conserved peptide uORF-containing transcript, expressed	chr1	25028750	25032202	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g01630	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr9	443788	450698	-	CDS,three_prime_UTR
3	LOC_Os09g36130	expressed protein	gene	expressed protein	chr9	20798654	20802452	-	CDS,three_prime_UTR
3	LOC_Os09g15350	expressed protein	gene	expressed protein	chr9	9384266	9386635	+	three_prime_UTR,CDS
3	LOC_Os06g08280	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr6	4007140	4012540	+	CDS
3	LOC_Os02g02640	NBS-LRR disease resistance protein, putative	gene	NBS-LRR disease resistance protein, putative	chr2	967172	974497	+	CDS,promoter,downstream
3	LOC_Os07g25450	histone-lysine N-methyltransferase, putative, expressed	gene	histone-lysine N-methyltransferase, putative, expressed	chr7	14562268	14569232	+	three_prime_UTR
3	LOC_Os03g52090	calcium-transporting ATPase 3, endoplasmic reticulum-type, putative	gene	calcium-transporting ATPase 3, endoplasmic reticulum-type, putative	chr3	29882993	29903956	-	CDS
3	LOC_Os03g47930	expressed protein	gene	expressed protein	chr3	27231490	27244021	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g37040	DUF630/DUF632 domains containing protein, putative, expressed	gene	DUF630/DUF632 domains containing protein, putative, expressed	chr9	21365910	21369912	+	CDS
3	LOC_Os04g45490	elongation factor, putative, expressed	gene	elongation factor, putative, expressed	chr4	26732755	26735520	-	CDS
3	LOC_Os02g05870	expressed protein	gene	expressed protein	chr2	2898890	2903749	-	CDS,downstream
3	LOC_Os10g40270	ATROPGEF7/ROPGEF7, putative, expressed	gene	ATROPGEF7/ROPGEF7, putative, expressed	chr10	21513485	21516085	-	CDS,promoter
3	LOC_Os08g06344	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr8	3512831	3517779	-	CDS,three_prime_UTR
3	LOC_Os10g24020	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr10	12236737	12240424	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os09g17610	RING finger protein, putative, expressed	gene	RING finger protein, putative, expressed	chr9	10767865	10769610	+	CDS,three_prime_UTR,promoter
3	LOC_Os12g42150	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr12	26094981	26097170	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g20840	lipase class 3 family protein, putative, expressed	gene	lipase class 3 family protein, putative, expressed	chr1	11617309	11621509	+	CDS,three_prime_UTR
3	LOC_Os11g20384	SacI homology domain containing protein, expressed	gene	SacI homology domain containing protein, expressed	chr11	11780453	11796099	-	CDS
3	LOC_Os01g51530	methyltransferase domain containing protein, expressed	gene	methyltransferase domain containing protein, expressed	chr1	29597836	29600127	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g13530	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr7	7741968	7745786	-	CDS,three_prime_UTR
3	LOC_Os03g36760	expressed protein	gene	expressed protein	chr3	20390039	20395038	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g38490	DAG protein, chloroplast precursor, putative, expressed	gene	DAG protein, chloroplast precursor, putative, expressed	chr3	21362405	21367426	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g12330	tryptophan/tyrosine permease family protein, putative, expressed	gene	tryptophan/tyrosine permease family protein, putative, expressed	chr7	6952285	6958640	+	CDS,three_prime_UTR,promoter
3	LOC_Os11g43900	translationally-controlled tumor protein, putative, expressed	gene	translationally-controlled tumor protein, putative, expressed	chr11	26039285	26041549	-	three_prime_UTR
3	LOC_Os11g34360	lung seven transmembrane domain containing protein, putative, expressed	gene	lung seven transmembrane domain containing protein, putative, expressed	chr11	19670128	19674520	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g11780	transcription factor S-II, central domain containing protein, expressed	gene	transcription factor S-II, central domain containing protein, expressed	chr2	6083116	6089638	+	CDS
3	LOC_Os06g40560	26S protease regulatory subunit S10B, putative, expressed	gene	26S protease regulatory subunit S10B, putative, expressed	chr6	24181509	24185600	+	CDS
3	LOC_Os07g49150	26S protease regulatory subunit 4, putative, expressed	gene	26S protease regulatory subunit 4, putative, expressed	chr7	29434678	29439140	-	CDS,three_prime_UTR
3	LOC_Os05g10810	O-acyltransferase, putative, expressed	gene	O-acyltransferase, putative, expressed	chr5	5971873	5978672	+	CDS,three_prime_UTR
3	LOC_Os07g02250	expressed protein	gene	expressed protein	chr7	721836	725496	-	CDS,three_prime_UTR
3	LOC_Os01g11880	DJ-1 family protein, putative, expressed	gene	DJ-1 family protein, putative, expressed	chr1	6431336	6435086	+	CDS,three_prime_UTR
3	LOC_Os07g31850	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr7	18923443	18930507	-	CDS
3	LOC_Os02g19170	expressed protein	gene	expressed protein	chr2	11180080	11183155	+	CDS,three_prime_UTR
3	LOC_Os06g16270	heat shock factor binding protein 2, putative, expressed	gene	heat shock factor binding protein 2, putative, expressed	chr6	9262602	9264450	+	three_prime_UTR,downstream
3	LOC_Os02g01880	U5 small nuclear ribonucleoprotein 200 kDa helicase, putative	gene	U5 small nuclear ribonucleoprotein 200 kDa helicase, putative	chr2	484667	487862	+	CDS,promoter
3	LOC_Os01g53294	respiratory burst oxidase protein B, putative, expressed	gene	respiratory burst oxidase protein B, putative, expressed	chr1	30621627	30633361	+	CDS
3	LOC_Os02g39410	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr2	23770379	23776429	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g09570	6-phosphofructokinase, putative, expressed	gene	6-phosphofructokinase, putative, expressed	chr1	4904501	4908514	+	CDS,downstream
3	LOC_Os02g54730	transmembrane amino acid transporter protein, putative, expressed	gene	transmembrane amino acid transporter protein, putative, expressed	chr2	33506102	33512012	-	CDS,three_prime_UTR
3	LOC_Os03g13850	cell cycle checkpoint protein RAD17, putative, expressed	gene	cell cycle checkpoint protein RAD17, putative, expressed	chr3	7504789	7512499	+	CDS,three_prime_UTR
3	LOC_Os07g34610	oral cancer overexpressed protein 1, putative, expressed	gene	oral cancer overexpressed protein 1, putative, expressed	chr7	20748673	20750840	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os12g38750	nucleotide pyrophosphatase/phosphodiesterase, putative, expressed	gene	nucleotide pyrophosphatase/phosphodiesterase, putative, expressed	chr12	23771605	23775312	-	CDS
3	LOC_Os11g37690	TBC domain containing protein, expressed	gene	TBC domain containing protein, expressed	chr11	21801319	21805355	-	CDS
3	LOC_Os02g13650	expressed protein	gene	expressed protein	chr2	7321447	7322891	+	three_prime_UTR,downstream
3	LOC_Os02g52830	lipase, putative, expressed	gene	lipase, putative, expressed	chr2	32293905	32298113	-	three_prime_UTR,promoter
3	LOC_Os06g19210	cadmium tolerance factor, putative, expressed	gene	cadmium tolerance factor, putative, expressed	chr6	10931275	10934217	+	CDS,promoter,downstream
3	LOC_Os05g33600	cytochrome P450 72A1, putative, expressed	gene	cytochrome P450 72A1, putative, expressed	chr5	19693706	19696397	-	CDS,three_prime_UTR
3	LOC_Os11g47120	DEFL48 - Defensin and Defensin-like DEFL family, expressed	gene	DEFL48 - Defensin and Defensin-like DEFL family, expressed	chr11	27811872	27815496	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g07740	RNA binding protein, putative, expressed	gene	RNA binding protein, putative, expressed	chr2	4034219	4038403	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g43510	thaumatin, putative, expressed	gene	thaumatin, putative, expressed	chr8	27516748	27519615	+	three_prime_UTR
3	LOC_Os01g66580	RNA polymerase III RPC4 domain containing protein, expressed	gene	RNA polymerase III RPC4 domain containing protein, expressed	chr1	38658191	38660267	-	CDS
3	LOC_Os02g42190	OsWAK16 - OsWAK receptor-like protein kinase	gene	OsWAK16 - OsWAK receptor-like protein kinase	chr2	25368823	25372024	-	CDS,promoter
3	LOC_Os02g43430	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr2	26203100	26207138	-	CDS,three_prime_UTR
3	LOC_Os04g40060	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr4	23664186	23668801	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g58050	ribosomal protein S13p/S18e, putative, expressed	gene	ribosomal protein S13p/S18e, putative, expressed	chr3	33038392	33040280	-	three_prime_UTR,promoter
3	LOC_Os05g16740	SHR5-receptor-like kinase, putative, expressed	gene	SHR5-receptor-like kinase, putative, expressed	chr5	9517408	9527633	+	CDS
3	LOC_Os01g55740	OsRhmbd4 - Putative Rhomboid homologue, expressed	gene	OsRhmbd4 - Putative Rhomboid homologue, expressed	chr1	32093359	32097671	+	CDS
3	LOC_Os08g33488	OsMADS23 - MADS-box family gene with MIKCc type-box, expressed	gene	OsMADS23 - MADS-box family gene with MIKCc type-box, expressed	chr8	20894502	20904168	-	CDS
3	LOC_Os02g53990	cyclin-related protein, putative, expressed	gene	cyclin-related protein, putative, expressed	chr2	33048268	33060760	+	CDS
3	LOC_Os01g69250	mitochondrial import receptor subunit TOM20, putative, expressed	gene	mitochondrial import receptor subunit TOM20, putative, expressed	chr1	40239764	40243693	+	CDS,three_prime_UTR
3	LOC_Os12g43100	deoxyhypusine hydroxylase, putative, expressed	gene	deoxyhypusine hydroxylase, putative, expressed	chr12	26725980	26728768	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g33620	expressed protein	gene	expressed protein	chr5	19713958	19718086	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g48770	serine hydrolase domain containing protein, expressed	gene	serine hydrolase domain containing protein, expressed	chr7	29194079	29196473	-	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os12g41350	meiotic asynaptic mutant 1, putative, expressed	gene	meiotic asynaptic mutant 1, putative, expressed	chr12	25589064	25594650	+	CDS
3	LOC_Os01g07910	NADH-cytochrome b5 reductase, putative, expressed	gene	NADH-cytochrome b5 reductase, putative, expressed	chr1	3819168	3823523	-	CDS,three_prime_UTR
3	LOC_Os03g07140	male sterility protein, putative, expressed	gene	male sterility protein, putative, expressed	chr3	3652705	3656816	+	three_prime_UTR,downstream
3	LOC_Os12g44310	carotenoid cleavage dioxygenase, putative, expressed	gene	carotenoid cleavage dioxygenase, putative, expressed	chr12	27431135	27438436	+	CDS
3	LOC_Os02g55330	OsPOP6 - Putative Prolyl Oligopeptidase homologue, expressed	gene	OsPOP6 - Putative Prolyl Oligopeptidase homologue, expressed	chr2	33870782	33874639	-	CDS,three_prime_UTR
3	LOC_Os05g45400	expressed protein	gene	expressed protein	chr5	26271156	26274687	-	CDS,three_prime_UTR
3	LOC_Os01g11952	histone-lysine N-methyltransferase ATX5, putative, expressed	gene	histone-lysine N-methyltransferase ATX5, putative, expressed	chr1	6506356	6513891	-	CDS
3	LOC_Os08g23710	ribosomal protein L7Ae, putative, expressed	gene	ribosomal protein L7Ae, putative, expressed	chr8	14337745	14340226	-	CDS,three_prime_UTR
3	LOC_Os03g58640	FHA domain containing protein, putative, expressed	gene	FHA domain containing protein, putative, expressed	chr3	33386974	33395134	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g09980	sulfate transporter, putative, expressed	gene	sulfate transporter, putative, expressed	chr3	4995775	5001179	+	CDS
3	LOC_Os06g33549	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr6	19530565	19541007	-	CDS,three_prime_UTR
3	LOC_Os05g02040	RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed	gene	RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed	chr5	593356	598068	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g15040	FAR1 family protein, expressed	gene	FAR1 family protein, expressed	chr3	8211282	8217086	+	CDS,three_prime_UTR
3	LOC_Os02g08140	CAMK_KIN1/SNF1/Nim1_like.14 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_KIN1/SNF1/Nim1_like.14 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr2	4306569	4310093	-	CDS
3	LOC_Os12g39160	expressed protein	gene	expressed protein	chr12	24053640	24056428	-	three_prime_UTR,promoter
3	LOC_Os01g09730	expressed protein	gene	expressed protein	chr1	5015279	5017652	+	CDS,three_prime_UTR
3	LOC_Os01g49219	expressed protein	gene	expressed protein	chr1	28294046	28298955	+	three_prime_UTR
3	LOC_Os03g62870	DNA-directed RNA polymerases I, II, and III subunit RPABC3, putative, expressed	gene	DNA-directed RNA polymerases I, II, and III subunit RPABC3, putative, expressed	chr3	35555623	35557950	-	CDS,three_prime_UTR,downstream
3	LOC_Os02g42540	expressed protein	gene	expressed protein	chr2	25570903	25573305	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g58340	expressed protein	gene	expressed protein	chr3	33233136	33237680	+	CDS,three_prime_UTR
3	LOC_Os03g31110	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr3	17717973	17721859	-	CDS,three_prime_UTR
3	LOC_Os02g04270	DNA polymerase V, putative, expressed	gene	DNA polymerase V, putative, expressed	chr2	1882715	1888956	+	CDS
3	LOC_Os11g14050	leucine-rich repeat family protein, putative, expressed	gene	leucine-rich repeat family protein, putative, expressed	chr11	7792292	7798354	+	five_prime_UTR,CDS,promoter
3	LOC_Os02g11040	expressed protein	gene	expressed protein	chr2	5912591	5914192	-	three_prime_UTR,promoter
3	LOC_Os06g12360	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr6	6695667	6699783	+	CDS,downstream
3	LOC_Os08g25310	phosphatidylinositol transfer, putative, expressed	gene	phosphatidylinositol transfer, putative, expressed	chr8	15388857	15395938	+	CDS,three_prime_UTR
3	LOC_Os03g42750	roothairless 1, putative, expressed	gene	roothairless 1, putative, expressed	chr3	23795332	23806523	-	CDS,three_prime_UTR
3	LOC_Os05g19040	prefoldin, putative, expressed	gene	prefoldin, putative, expressed	chr5	11049007	11052355	-	CDS,three_prime_UTR
3	LOC_Os02g37150	expressed protein	gene	expressed protein	chr2	22453431	22456891	-	three_prime_UTR,promoter
3	LOC_Os01g47340	iron-sulfur cluster assembly enzyme ISCU, mitochondrial precursor, putative, expressed	gene	iron-sulfur cluster assembly enzyme ISCU, mitochondrial precursor, putative, expressed	chr1	27046321	27049442	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g02200	thymidine kinase, putative, expressed	gene	thymidine kinase, putative, expressed	chr3	735181	738880	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g11520	DUF565 domain containing protein, putative, expressed	gene	DUF565 domain containing protein, putative, expressed	chr9	6438622	6440905	-	CDS,three_prime_UTR
3	LOC_Os05g05230	expressed protein	gene	expressed protein	chr5	2548568	2559147	-	CDS,three_prime_UTR
3	LOC_Os01g14870	zinc finger matrin-type protein 5, putative, expressed	gene	zinc finger matrin-type protein 5, putative, expressed	chr1	8333519	8337574	+	CDS,three_prime_UTR,promoter
3	LOC_Os09g21230	AMP-binding enzyme, putative, expressed	gene	AMP-binding enzyme, putative, expressed	chr9	12816152	12820683	+	CDS,three_prime_UTR
3	LOC_Os03g42464	expressed protein	gene	expressed protein	chr3	23621638	23628823	-	five_prime_UTR
3	LOC_Os02g43340	hydrolase, alpha/beta fold family domain containing protein, expressed	gene	hydrolase, alpha/beta fold family domain containing protein, expressed	chr2	26140725	26145521	-	CDS
3	LOC_Os11g01570	PMR5, putative, expressed	gene	PMR5, putative, expressed	chr11	328044	331826	+	CDS,three_prime_UTR
3	LOC_Os07g35940	beta-amylase, putative	gene	beta-amylase, putative	chr7	21502822	21505363	+	CDS,promoter,downstream
3	LOC_Os06g36490	ethylene-responsive element-binding protein, putative, expressed	gene	ethylene-responsive element-binding protein, putative, expressed	chr6	21430261	21434705	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g54784	expressed protein	gene	expressed protein	chr1	31510490	31518551	+	CDS,three_prime_UTR
3	LOC_Os03g62750	inner membrane protein, putative, expressed	gene	inner membrane protein, putative, expressed	chr3	35504188	35510900	+	CDS,three_prime_UTR
3	LOC_Os11g32880	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr11	18955169	18963353	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g51430	SEC14 cytosolic factor family protein, putative, expressed	gene	SEC14 cytosolic factor family protein, putative, expressed	chr3	29414156	29418479	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g39400	isochorismatase family protein, putative, expressed	gene	isochorismatase family protein, putative, expressed	chr2	23767238	23769799	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os12g06250	expressed protein	gene	expressed protein	chr12	2969930	2973162	+	three_prime_UTR,downstream
3	LOC_Os02g04710	cycloartenol synthase, putative, expressed	gene	cycloartenol synthase, putative, expressed	chr2	2128229	2137102	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g10600	enoyl-acyl-carrier-protein reductase NADH, chloroplast precursor, expressed	gene	enoyl-acyl-carrier-protein reductase NADH, chloroplast precursor, expressed	chr9	5780818	5785018	+	CDS,three_prime_UTR
3	LOC_Os06g08650	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr6	4312313	4315597	+	three_prime_UTR
3	LOC_Os09g30270	transposon protein, putative, Mutator sub-class, expressed	gene	transposon protein, putative, Mutator sub-class, expressed	chr9	18431161	18434049	+	CDS,three_prime_UTR
3	LOC_Os04g33700	ABC transmembrane transporter domain containing protein, expressed	gene	ABC transmembrane transporter domain containing protein, expressed	chr4	20234050	20238450	-	CDS,promoter
3	LOC_Os01g50050	polyprenyl synthetase, putative, expressed	gene	polyprenyl synthetase, putative, expressed	chr1	28751010	28754540	-	CDS,promoter,downstream
3	LOC_Os12g05410	G10 protein, putative, expressed	gene	G10 protein, putative, expressed	chr12	2448162	2450527	+	three_prime_UTR,downstream
3	LOC_Os10g33970	double-stranded RNA binding motif containing protein, expressed	gene	double-stranded RNA binding motif containing protein, expressed	chr10	18031345	18037535	-	CDS
3	LOC_Os09g35970	6-phosphogluconolactonase, putative, expressed	gene	6-phosphogluconolactonase, putative, expressed	chr9	20724411	20727518	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g37320	expressed protein	gene	expressed protein	chr8	23576537	23579465	-	CDS,three_prime_UTR
3	LOC_Os12g19370	DNA polymerase I family protein, expressed	gene	DNA polymerase I family protein, expressed	chr12	11239907	11258057	+	CDS
3	LOC_Os12g41380	ulp1 protease family protein, putative, expressed	gene	ulp1 protease family protein, putative, expressed	chr12	25598831	25604881	+	CDS
3	LOC_Os08g05470	expressed protein	gene	expressed protein	chr8	2908612	2911541	-	five_prime_UTR
3	LOC_Os03g11240	nucleotidyltransferase, putative, expressed	gene	nucleotidyltransferase, putative, expressed	chr3	5778594	5787833	-	CDS,three_prime_UTR
3	LOC_Os05g01780	STE_PAK_Ste20++TranslationKinase_Slob_Wnk.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	gene	STE_PAK_Ste20++TranslationKinase_Slob_Wnk.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	chr5	471400	476283	+	CDS,three_prime_UTR
3	LOC_Os05g32310	LSM domain containing protein, expressed	gene	LSM domain containing protein, expressed	chr5	18775817	18778305	-	CDS,three_prime_UTR
3	LOC_Os06g49130	TAZ zinc finger family protein, expressed	gene	TAZ zinc finger family protein, expressed	chr6	29766894	29780105	-	CDS,three_prime_UTR
3	LOC_Os05g40900	expressed protein	gene	expressed protein	chr5	23927929	23931857	-	three_prime_UTR,promoter
3	LOC_Os01g52864	transmembrane protein, putative, expressed	gene	transmembrane protein, putative, expressed	chr1	30397900	30404876	+	three_prime_UTR,CDS
3	LOC_Os06g44910	OsGrx_C4 - glutaredoxin subgroup I, expressed	gene	OsGrx_C4 - glutaredoxin subgroup I, expressed	chr6	27150479	27153089	+	CDS,three_prime_UTR
3	LOC_Os04g12560	receptor-like protein kinase, putative, expressed	gene	receptor-like protein kinase, putative, expressed	chr4	6950573	6953192	-	CDS
3	LOC_Os03g40920	expressed protein	gene	expressed protein	chr3	22737756	22741863	+	three_prime_UTR,downstream
3	LOC_Os03g02160	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	gene	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	chr3	716445	719835	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g44660	cytosolic 5-nucleotidase III, putative, expressed	gene	cytosolic 5-nucleotidase III, putative, expressed	chr3	25140594	25144474	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g19980	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr8	11955656	11964973	-	CDS,three_prime_UTR
3	LOC_Os02g16660	cbxX, chromosomal, putative, expressed	gene	cbxX, chromosomal, putative, expressed	chr2	9514331	9518283	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g50340	coatomer alpha subunit, putative, expressed	gene	coatomer alpha subunit, putative, expressed	chr3	28712449	28717766	-	CDS
3	LOC_Os10g15390	ribosomal protein S7, putative, expressed	gene	ribosomal protein S7, putative, expressed	chr10	8084371	8095176	+	CDS
3	LOC_Os01g11980	SFT2, putative, expressed	gene	SFT2, putative, expressed	chr1	6524486	6527272	+	CDS,three_prime_UTR
3	LOC_Os08g05750	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr8	3078280	3083583	-	three_prime_UTR
3	LOC_Os01g23640	mov34/MPN/PAD-1 family protein, expressed	gene	mov34/MPN/PAD-1 family protein, expressed	chr1	13295306	13304269	+	CDS,three_prime_UTR,promoter
3	LOC_Os02g02270	expressed protein	gene	expressed protein	chr2	743291	745498	+	three_prime_UTR,downstream
3	LOC_Os01g15029	expressed protein	gene	expressed protein	chr1	8443463	8446054	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os07g47040	expressed protein	gene	expressed protein	chr7	28117080	28124364	+	CDS,three_prime_UTR
3	LOC_Os11g31890	NLI interacting factor-like phosphatase, putative, expressed	gene	NLI interacting factor-like phosphatase, putative, expressed	chr11	18274422	18280972	-	CDS
3	LOC_Os04g33080	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr4	19849262	19853264	-	CDS,promoter
3	LOC_Os08g32085	expressed protein	gene	expressed protein	chr8	19881619	19885150	-	CDS
3	LOC_Os04g32690	expressed protein	gene	expressed protein	chr4	19523403	19538009	-	three_prime_UTR,promoter
3	LOC_Os11g10750	OsSCP48 - Putative Serine Carboxypeptidase homologue, expressed	gene	OsSCP48 - Putative Serine Carboxypeptidase homologue, expressed	chr11	5894400	5898445	-	CDS,three_prime_UTR
3	LOC_Os01g14050	C2 domain containing protein, putative, expressed	gene	C2 domain containing protein, putative, expressed	chr1	7861001	7866812	-	CDS
3	LOC_Os08g32660	expressed protein	gene	expressed protein	chr8	20220980	20223886	+	five_prime_UTR,CDS
3	LOC_Os04g52850	OTU-like cysteine protease family protein, putative, expressed	gene	OTU-like cysteine protease family protein, putative, expressed	chr4	31289272	31292331	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g01859	ribosomal protein L30 containing protein, expressed	gene	ribosomal protein L30 containing protein, expressed	chr8	528346	531148	+	three_prime_UTR
3	LOC_Os11g04960	no apical meristem protein, putative	gene	no apical meristem protein, putative	chr11	2120656	2122507	+	CDS,promoter,downstream
3	LOC_Os12g08220	histone deacetylase, putative, expressed	gene	histone deacetylase, putative, expressed	chr12	4192936	4197866	+	CDS
3	LOC_Os10g20650	glucan endo-1,3-beta-glucosidase-related, putative, expressed	gene	glucan endo-1,3-beta-glucosidase-related, putative, expressed	chr10	10356480	10360732	-	CDS,three_prime_UTR
3	LOC_Os07g42640	FYVE zinc finger family protein, expressed	gene	FYVE zinc finger family protein, expressed	chr7	25529947	25533264	+	CDS,promoter
3	LOC_Os04g41040	DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative, expressed	gene	DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative, expressed	chr4	24167252	24170282	-	CDS,three_prime_UTR
3	LOC_Os01g42980	ribosomal protein L22, putative, expressed	gene	ribosomal protein L22, putative, expressed	chr1	24479811	24482713	+	CDS,three_prime_UTR
3	LOC_Os11g06200	hypothetical protein	gene	hypothetical protein	chr11	2957362	2961572	+	CDS,downstream
3	LOC_Os03g50010	toc64, putative, expressed	gene	toc64, putative, expressed	chr3	28526142	28534294	-	CDS,three_prime_UTR
3	LOC_Os08g06880	expressed protein	gene	expressed protein	chr8	3838192	3841451	+	three_prime_UTR
3	LOC_Os01g10430	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr1	5492186	5498451	+	CDS,three_prime_UTR
3	LOC_Os03g45300	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr3	25574072	25580855	+	CDS,three_prime_UTR
3	LOC_Os01g58220	translation initiation factor SUI1, putative, expressed	gene	translation initiation factor SUI1, putative, expressed	chr1	33650098	33654136	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os03g50150	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr3	28592851	28596988	+	CDS
3	LOC_Os07g45410	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr7	27083846	27093224	+	CDS,promoter
3	LOC_Os12g39200	seed maturation protein PM23, putative, expressed	gene	seed maturation protein PM23, putative, expressed	chr12	24104229	24108314	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g34980	csAtPR5, putative, expressed	gene	csAtPR5, putative, expressed	chr12	21255727	21259333	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g49110	prenyltransferase, putative, expressed	gene	prenyltransferase, putative, expressed	chr1	28230373	28234376	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g36900	drought induced 19 protein, putative, expressed	gene	drought induced 19 protein, putative, expressed	chr12	22583201	22588815	+	CDS
3	LOC_Os02g15885	expressed protein	gene	expressed protein	chr2	8984883	8986778	-	CDS
3	LOC_Os01g34970	MDR-like ABC transporter, putative, expressed	gene	MDR-like ABC transporter, putative, expressed	chr1	19351010	19358505	+	CDS,three_prime_UTR
3	LOC_Os04g52140	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr4	30788992	30794729	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g08960	ubiquitin-conjugating enzyme, putative, expressed	gene	ubiquitin-conjugating enzyme, putative, expressed	chr5	4958237	4964937	+	CDS,three_prime_UTR
3	LOC_Os05g03630	dnaJ domain containing protein, expressed	gene	dnaJ domain containing protein, expressed	chr5	1553417	1557235	+	CDS,three_prime_UTR
3	LOC_Os05g35070	DUF630/DUF632 domains containing protein, putative, expressed	gene	DUF630/DUF632 domains containing protein, putative, expressed	chr5	20754025	20758221	-	CDS,three_prime_UTR
3	LOC_Os05g05730	OsGrx_S1 - glutaredoxin subgroup III	gene	OsGrx_S1 - glutaredoxin subgroup III	chr5	2859394	2859738	-	CDS,promoter,downstream
3	LOC_Os05g32330	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	gene	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	chr5	18783426	18787426	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g47330	dynamin family protein, putative, expressed	gene	dynamin family protein, putative, expressed	chr6	28687796	28693063	+	CDS,three_prime_UTR
3	LOC_Os01g63820	double-stranded RNA binding motif containing protein, expressed	gene	double-stranded RNA binding motif containing protein, expressed	chr1	37021998	37030637	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g43230	expressed protein	gene	expressed protein	chr1	24694716	24696869	-	CDS,three_prime_UTR
3	LOC_Os02g58139	OsSigP1 - Putative Type I Signal Peptidase homologue; employs a putative Ser/His catalytic dyad, expressed	gene	OsSigP1 - Putative Type I Signal Peptidase homologue; employs a putative Ser/His catalytic dyad, expressed	chr2	35566506	35572288	-	three_prime_UTR,CDS
3	LOC_Os02g41470	tRNA synthetases class II domain containing protein, expressed	gene	tRNA synthetases class II domain containing protein, expressed	chr2	24842305	24854243	-	CDS,three_prime_UTR
3	LOC_Os07g08200	methyltransferase domain containing protein, putative, expressed	gene	methyltransferase domain containing protein, putative, expressed	chr7	4181045	4183049	-	CDS,promoter,downstream
3	LOC_Os09g33900	FAD dependent oxidoreductase domain containing protein, expressed	gene	FAD dependent oxidoreductase domain containing protein, expressed	chr9	20011042	20017179	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g65940	expressed protein	gene	expressed protein	chr1	38282235	38285804	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g19940	cwfJ-like family protein, putative, expressed	gene	cwfJ-like family protein, putative, expressed	chr9	11933576	11939137	+	CDS
3	LOC_Os02g34460	40S ribosomal protein S10, putative, expressed	gene	40S ribosomal protein S10, putative, expressed	chr2	20643698	20646188	+	CDS,three_prime_UTR
3	LOC_Os01g66050	wound-responsive family protein, putative, expressed	gene	wound-responsive family protein, putative, expressed	chr1	38328136	38331552	+	CDS
3	LOC_Os06g25439	NAD dependent epimerase/dehydratase family protein, putative, expressed	gene	NAD dependent epimerase/dehydratase family protein, putative, expressed	chr6	14879481	14880941	-	CDS,downstream
3	LOC_Os08g40860	RNA pseudouridine synthase, putative, expressed	gene	RNA pseudouridine synthase, putative, expressed	chr8	25851015	25854633	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g16152	peroxiredoxin, putative, expressed	gene	peroxiredoxin, putative, expressed	chr1	9116901	9120417	-	CDS,three_prime_UTR
3	LOC_Os07g22710	CAMK_CAMK_like.32 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.32 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr7	12793967	12802575	-	CDS,three_prime_UTR
3	LOC_Os01g47350	enoyl-CoA hydratase/isomerase family protein, putative, expressed	gene	enoyl-CoA hydratase/isomerase family protein, putative, expressed	chr1	27049805	27053560	-	CDS
3	LOC_Os04g49310	tRNA-splicing endonuclease positive effector-related, putative, expressed	gene	tRNA-splicing endonuclease positive effector-related, putative, expressed	chr4	29245875	29249250	-	five_prime_UTR,CDS
3	LOC_Os03g09290	yippee zinc-binding protein, putative, expressed	gene	yippee zinc-binding protein, putative, expressed	chr3	4853970	4856536	+	CDS,three_prime_UTR,promoter
3	LOC_Os12g25640	SAP domain containing protein, expressed	gene	SAP domain containing protein, expressed	chr12	14835860	14842772	-	CDS
3	LOC_Os07g07080	regulator of chromosome condensation/beta-lactamase-inhibitor protein II, putative, expressed	gene	regulator of chromosome condensation/beta-lactamase-inhibitor protein II, putative, expressed	chr7	3490977	3498333	-	CDS,three_prime_UTR
3	LOC_Os03g57130	expressed protein	gene	expressed protein	chr3	32562926	32568985	-	CDS,three_prime_UTR
3	LOC_Os12g06620	deoxyhypusine hydroxylase, putative, expressed	gene	deoxyhypusine hydroxylase, putative, expressed	chr12	3207473	3210801	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g27950	ataxin-2 related protein, putative, expressed	gene	ataxin-2 related protein, putative, expressed	chr2	16531342	16539876	-	CDS,three_prime_UTR
3	LOC_Os04g08190	expressed protein	gene	expressed protein	chr4	4348744	4351218	+	CDS,promoter
3	LOC_Os12g16410	isoflavone reductase, putative, expressed	gene	isoflavone reductase, putative, expressed	chr12	9394443	9397820	-	CDS,three_prime_UTR
3	LOC_Os11g17610	expressed protein	gene	expressed protein	chr11	9810484	9814812	-	CDS
3	LOC_Os02g15160	OsFBX40 - F-box domain containing protein, expressed	gene	OsFBX40 - F-box domain containing protein, expressed	chr2	8453871	8455935	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g39260	CAF1 family ribonuclease containing protein, putative, expressed	gene	CAF1 family ribonuclease containing protein, putative, expressed	chr4	23171848	23176690	-	CDS,three_prime_UTR,downstream
3	LOC_Os12g43370	peptidase, M24 family protein, putative, expressed	gene	peptidase, M24 family protein, putative, expressed	chr12	26872676	26876489	+	CDS,three_prime_UTR,promoter
3	LOC_Os09g27230	brevis radix, putative, expressed	gene	brevis radix, putative, expressed	chr9	16554670	16556678	+	CDS,downstream
3	LOC_Os01g04880	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr1	2260455	2265908	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g43120	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr7	25838990	25842879	-	CDS,three_prime_UTR
3	LOC_Os12g19040	expressed protein	gene	expressed protein	chr12	11058093	11070851	-	CDS
3	LOC_Os12g37100	pentatricopeptide repeat domain containing protein, putative, expressed	gene	pentatricopeptide repeat domain containing protein, putative, expressed	chr12	22689582	22693282	-	three_prime_UTR,promoter
3	LOC_Os10g30520	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr10	15798062	15802345	+	CDS
3	LOC_Os05g19380	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr5	11253482	11256565	-	three_prime_UTR,promoter,downstream
3	LOC_Os04g20424	neural Wiskott-Aldrich syndrome protein, putative	gene	neural Wiskott-Aldrich syndrome protein, putative	chr4	11416302	11421278	-	three_prime_UTR
3	LOC_Os01g12230	peptidase C45, acyl-coenzyme A/6-aminopenicillanic acid acyl-transferase, putative, expressed	gene	peptidase C45, acyl-coenzyme A/6-aminopenicillanic acid acyl-transferase, putative, expressed	chr1	6666854	6669442	-	CDS,promoter
3	LOC_Os03g03460	erythronate-4-phosphate dehydrogenase, putative, expressed	gene	erythronate-4-phosphate dehydrogenase, putative, expressed	chr3	1493306	1496243	-	CDS
3	LOC_Os07g47100	transporter, monovalent cation:proton antiporter-2 family, putative, expressed	gene	transporter, monovalent cation:proton antiporter-2 family, putative, expressed	chr7	28163419	28168342	+	CDS
3	LOC_Os07g01920	nucleolar GTP-binding protein 1, putative, expressed	gene	nucleolar GTP-binding protein 1, putative, expressed	chr7	558356	562170	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g37610	MATE efflux protein, putative, expressed	gene	MATE efflux protein, putative, expressed	chr9	21680646	21687104	+	CDS,three_prime_UTR
3	LOC_Os03g44620	chaperone protein dnaJ, putative, expressed	gene	chaperone protein dnaJ, putative, expressed	chr3	25125315	25129155	+	CDS,three_prime_UTR
3	LOC_Os02g30060	3-oxoacyl-reductase, chloroplast precursor, putative, expressed	gene	3-oxoacyl-reductase, chloroplast precursor, putative, expressed	chr2	17842313	17846690	-	three_prime_UTR,promoter
3	LOC_Os01g22510	cyclase/dehydrase family protein, expressed	gene	cyclase/dehydrase family protein, expressed	chr1	12649514	12653367	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g18810	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr2	10960619	10968057	+	CDS
3	LOC_Os11g37990	chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed	gene	chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed	chr11	22057447	22063464	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g39040	UBA and UBX domain-containing protein, putative, expressed	gene	UBA and UBX domain-containing protein, putative, expressed	chr4	23000776	23005642	+	CDS,three_prime_UTR
3	LOC_Os09g39680	transporter, major facilitator family, putative, expressed	gene	transporter, major facilitator family, putative, expressed	chr9	22766841	22771153	+	CDS,three_prime_UTR,promoter
3	LOC_Os09g39320	CTR1-like protein kinase, putative, expressed	gene	CTR1-like protein kinase, putative, expressed	chr9	22598493	22607901	-	CDS
3	LOC_Os02g35000	chaperone protein dnaJ 10, putative, expressed	gene	chaperone protein dnaJ 10, putative, expressed	chr2	20988468	20991327	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g12460	conserved oligomeric complex COG6 family protein, expressed	gene	conserved oligomeric complex COG6 family protein, expressed	chr3	6580187	6586867	+	CDS,three_prime_UTR,promoter
3	LOC_Os12g13460	SET domain-containing protein, putative, expressed	gene	SET domain-containing protein, putative, expressed	chr12	7543984	7551712	+	three_prime_UTR
3	LOC_Os12g38000	60S ribosomal protein L8, putative, expressed	gene	60S ribosomal protein L8, putative, expressed	chr12	23316452	23318339	+	three_prime_UTR,downstream
3	LOC_Os01g08340	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr1	4090068	4093859	+	CDS
3	LOC_Os07g09590	bHLH transcription factor, putative	gene	bHLH transcription factor, putative	chr7	5081120	5083791	-	CDS
3	LOC_Os11g34850	maf, putative, expressed	gene	maf, putative, expressed	chr11	19953928	19958041	-	CDS,three_prime_UTR
3	LOC_Os02g06300	GTP-binding protein lepA, putative, expressed	gene	GTP-binding protein lepA, putative, expressed	chr2	3143756	3152625	-	CDS,three_prime_UTR
3	LOC_Os03g40100	ACT domain containing protein, expressed	gene	ACT domain containing protein, expressed	chr3	22280193	22283149	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g15500	expressed protein	gene	expressed protein	chr7	8993047	8996220	-	CDS,promoter
3	LOC_Os07g43380	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr7	25976116	25978996	+	five_prime_UTR,CDS
3	LOC_Os06g40580	expressed protein	gene	expressed protein	chr6	24193696	24194860	+	CDS,three_prime_UTR,promoter
3	LOC_Os08g10470	histone-lysine N-methyltransferase ASHR2, putative, expressed	gene	histone-lysine N-methyltransferase ASHR2, putative, expressed	chr8	6154167	6156820	+	three_prime_UTR
3	LOC_Os06g06560	starch synthase, putative, expressed	gene	starch synthase, putative, expressed	chr6	3078060	3085809	-	CDS
3	LOC_Os08g01320	C3-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C3 subfamily conserved sequence, expressed	gene	C3-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C3 subfamily conserved sequence, expressed	chr8	200367	202844	-	CDS,three_prime_UTR
3	LOC_Os05g38250	membrane associated DUF588 domain containing protein, putative, expressed	gene	membrane associated DUF588 domain containing protein, putative, expressed	chr5	22362802	22365236	+	CDS,three_prime_UTR
3	LOC_Os11g02464	vacuolar-sorting receptor precursor, putative, expressed	gene	vacuolar-sorting receptor precursor, putative, expressed	chr11	741794	746744	-	CDS
3	LOC_Os11g37640	ADP-ribosylation factor, putative, expressed	gene	ADP-ribosylation factor, putative, expressed	chr11	21749662	21752992	+	CDS
3	LOC_Os02g43930	chaperone protein dnaJ, putative, expressed	gene	chaperone protein dnaJ, putative, expressed	chr2	26513457	26517568	+	CDS
3	LOC_Os10g34200	expressed protein	gene	expressed protein	chr10	18173166	18175914	-	CDS,three_prime_UTR
3	LOC_Os03g06510	KIP1, putative, expressed	gene	KIP1, putative, expressed	chr3	3257433	3269592	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g71250	expressed protein	gene	expressed protein	chr1	41225658	41228763	-	CDS,three_prime_UTR
3	LOC_Os01g14860	CGMC_GSK.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	gene	CGMC_GSK.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	chr1	8328704	8333052	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g44300	MSP domain containing protein, expressed	gene	MSP domain containing protein, expressed	chr2	26793770	26796450	+	CDS,three_prime_UTR
3	LOC_Os01g01050	R3H domain containing protein, expressed	gene	R3H domain containing protein, expressed	chr1	21841	25971	+	CDS,three_prime_UTR
3	LOC_Os08g16610	Rad21 / Rec8 like protein, putative, expressed	gene	Rad21 / Rec8 like protein, putative, expressed	chr8	10159235	10164703	+	CDS,three_prime_UTR
3	LOC_Os03g39407	expressed protein	gene	expressed protein	chr3	21898924	21902741	+	three_prime_UTR
3	LOC_Os08g36790	bZIP transcription factor, putative, expressed	gene	bZIP transcription factor, putative, expressed	chr8	23231684	23238133	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g43650	L-allo-threonine aldolase, putative, expressed	gene	L-allo-threonine aldolase, putative, expressed	chr4	25641530	25645568	-	CDS
3	LOC_Os03g21530	AARP2CN domain containing protein, expressed	gene	AARP2CN domain containing protein, expressed	chr3	12295793	12306353	+	CDS
3	LOC_Os10g26680	pectinesterase, putative, expressed	gene	pectinesterase, putative, expressed	chr10	13861670	13864067	-	CDS,three_prime_UTR
3	LOC_Os04g44300	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr4	26051090	26055525	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g41410	nucleoside diphosphate kinase, putative, expressed	gene	nucleoside diphosphate kinase, putative, expressed	chr10	22186387	22188912	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g64200	ABC-2 type transporter, putative, expressed	gene	ABC-2 type transporter, putative, expressed	chr3	36266266	36271427	-	CDS
3	LOC_Os03g60140	U-box domain-containing protein, putative, expressed	gene	U-box domain-containing protein, putative, expressed	chr3	34191706	34194697	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g09790	disease resistance protein RPM1, putative, expressed	gene	disease resistance protein RPM1, putative, expressed	chr2	5048653	5052500	-	five_prime_UTR,CDS,downstream
3	LOC_Os05g04860	agenet domain containing protein, putative, expressed	gene	agenet domain containing protein, putative, expressed	chr5	2334686	2339639	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g35890	expressed protein	gene	expressed protein	chr2	21555979	21557407	-	three_prime_UTR,promoter
3	LOC_Os11g16390	expressed protein	gene	expressed protein	chr11	9050410	9053980	-	CDS,three_prime_UTR
3	LOC_Os12g32470	expressed protein	gene	expressed protein	chr12	19568465	19573687	+	five_prime_UTR,CDS
3	LOC_Os07g31300	ATP synthase delta chain, mitochondrial precursor, putative, expressed	gene	ATP synthase delta chain, mitochondrial precursor, putative, expressed	chr7	18531546	18534087	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g28720	spotted leaf 11, putative, expressed	gene	spotted leaf 11, putative, expressed	chr2	16975607	16979784	-	CDS,three_prime_UTR
3	LOC_Os02g42590	WD-40 repeat family protein, putative, expressed	gene	WD-40 repeat family protein, putative, expressed	chr2	25613152	25619006	+	CDS,three_prime_UTR
3	LOC_Os01g72800	signal recognition particle receptor, putative, expressed	gene	signal recognition particle receptor, putative, expressed	chr1	42233540	42236414	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g36710	SET, putative, expressed	gene	SET, putative, expressed	chr2	22145563	22150173	-	CDS,three_prime_UTR
3	LOC_Os06g06115	expressed protein	gene	expressed protein	chr6	2827444	2829315	+	three_prime_UTR,downstream
3	LOC_Os03g51160	fb27, putative, expressed	gene	fb27, putative, expressed	chr3	29268613	29271655	-	three_prime_UTR
3	LOC_Os04g40370	OsFBX142 - F-box domain containing protein, expressed	gene	OsFBX142 - F-box domain containing protein, expressed	chr4	23813685	23817108	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g71100	expressed protein	gene	expressed protein	chr1	41148912	41153635	-	three_prime_UTR,promoter,downstream
3	LOC_Os03g54930	VIP4, putative	gene	VIP4, putative	chr3	31218400	31224801	-	CDS
3	LOC_Os08g08240	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr8	4711557	4716884	+	CDS,three_prime_UTR,promoter
3	LOC_Os09g31220	expressed protein	gene	expressed protein	chr9	18778534	18781252	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g32720	zinc knuckle domain containing protein, expressed	gene	zinc knuckle domain containing protein, expressed	chr11	18864736	18869199	+	CDS,three_prime_UTR
3	LOC_Os07g36950	expressed protein	gene	expressed protein	chr7	22124146	22126931	+	three_prime_UTR,downstream
3	LOC_Os04g56770	conserved hypothetical protein	gene	conserved hypothetical protein	chr4	33671620	33673950	+	CDS,downstream
3	LOC_Os03g59750	DNA gyrase subunit A, chloroplast/mitochondrial precursor, putative, expressed	gene	DNA gyrase subunit A, chloroplast/mitochondrial precursor, putative, expressed	chr3	34003709	34008512	-	CDS,promoter
3	LOC_Os01g56990	Regulator of chromosome condensation domain containing protein, expressed	gene	Regulator of chromosome condensation domain containing protein, expressed	chr1	32927993	32931748	-	CDS,three_prime_UTR
3	LOC_Os12g03500	expressed protein	gene	expressed protein	chr12	1386551	1390278	-	CDS,three_prime_UTR
3	LOC_Os07g10480	expressed protein	gene	expressed protein	chr7	5639467	5641748	+	three_prime_UTR,downstream
3	LOC_Os01g07520	proline-rich family protein, putative, expressed	gene	proline-rich family protein, putative, expressed	chr1	3590811	3595154	-	CDS
3	LOC_Os06g38680	expressed protein	gene	expressed protein	chr6	22966819	22970854	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os12g32980	potyvirus VPg interacting protein, putative, expressed	gene	potyvirus VPg interacting protein, putative, expressed	chr12	19885777	19889445	-	CDS
3	LOC_Os07g38560	adenylyl-sulfate kinase, putative, expressed	gene	adenylyl-sulfate kinase, putative, expressed	chr7	23159360	23163560	+	CDS,three_prime_UTR
3	LOC_Os09g35980	expressed protein	gene	expressed protein	chr9	20731108	20734247	-	CDS,three_prime_UTR
3	LOC_Os06g08840	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr6	4427667	4431337	+	three_prime_UTR
3	LOC_Os12g05810	syntaxin-18, putative, expressed	gene	syntaxin-18, putative, expressed	chr12	2677066	2680668	+	CDS,three_prime_UTR
3	LOC_Os06g36170	initiator tRNA phosphoribosyl transferase family protein, putative, expressed	gene	initiator tRNA phosphoribosyl transferase family protein, putative, expressed	chr6	21166585	21170551	-	CDS,promoter
3	LOC_Os05g35170	no apical meristem protein, putative, expressed	gene	no apical meristem protein, putative, expressed	chr5	20817763	20821884	-	CDS,three_prime_UTR
3	LOC_Os02g10230	metal cation transporter, putative, expressed	gene	metal cation transporter, putative, expressed	chr2	5357310	5361634	+	CDS,three_prime_UTR
3	LOC_Os03g19580	expressed protein	gene	expressed protein	chr3	11006231	11010605	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g29810	OsClp6 - Putative Clp protease homologue, expressed	gene	OsClp6 - Putative Clp protease homologue, expressed	chr3	16993142	16996616	+	CDS,three_prime_UTR
3	LOC_Os01g51420	calcineurin B, putative, expressed	gene	calcineurin B, putative, expressed	chr1	29567502	29570439	+	CDS
3	LOC_Os04g01780	uncharacterized ACR, COG1399 family protein, expressed	gene	uncharacterized ACR, COG1399 family protein, expressed	chr4	497114	500011	+	CDS
3	LOC_Os02g05340	proteasome/cyclosome repeat containing protein, expressed	gene	proteasome/cyclosome repeat containing protein, expressed	chr2	2563635	2571262	+	three_prime_UTR,CDS
3	LOC_Os08g32630	FAD dependent oxidoreductase, putative, expressed	gene	FAD dependent oxidoreductase, putative, expressed	chr8	20206147	20216124	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g08729	ATP-dependent DNA helicase 2 subunit 1, putative, expressed	gene	ATP-dependent DNA helicase 2 subunit 1, putative, expressed	chr7	4484207	4495252	+	CDS,three_prime_UTR
3	LOC_Os06g21980	pantothenate kinase 4, putative, expressed	gene	pantothenate kinase 4, putative, expressed	chr6	12707085	12712102	+	CDS,three_prime_UTR
3	LOC_Os12g07060	chaperone protein dnaJ, putative, expressed	gene	chaperone protein dnaJ, putative, expressed	chr12	3454589	3462158	+	CDS
3	LOC_Os09g02140	expressed protein	gene	expressed protein	chr9	816568	821770	+	three_prime_UTR,downstream
3	LOC_Os07g26740	60S ribosomal protein L44, putative, expressed	gene	60S ribosomal protein L44, putative, expressed	chr7	15447868	15450420	+	CDS
3	LOC_Os03g42880	nucleotide-binding protein-like, putative, expressed	gene	nucleotide-binding protein-like, putative, expressed	chr3	23905822	23911385	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os01g72350	amidohydrolase, putative, expressed	gene	amidohydrolase, putative, expressed	chr1	41963083	41969101	+	CDS
3	LOC_Os12g17490	stripe rust resistance protein Yr10, putative, expressed	gene	stripe rust resistance protein Yr10, putative, expressed	chr12	10014103	10018771	-	CDS,promoter
3	LOC_Os06g36880	cysteine synthase, putative, expressed	gene	cysteine synthase, putative, expressed	chr6	21729405	21732640	-	CDS,downstream
3	LOC_Os01g26020	expressed protein	gene	expressed protein	chr1	14751063	14753604	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g42920	60S ribosomal protein L7, putative, expressed	gene	60S ribosomal protein L7, putative, expressed	chr8	27125046	27127010	+	three_prime_UTR,promoter
3	LOC_Os03g29170	sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed	gene	sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed	chr3	16570589	16576479	+	CDS,three_prime_UTR
3	LOC_Os06g49420	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr6	29938759	29947042	-	CDS,three_prime_UTR
3	LOC_Os01g69220	exostosin family domain containing protein, expressed	gene	exostosin family domain containing protein, expressed	chr1	40229156	40232177	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g38720	Lung seven transmembrane receptor domain containing protein, putative, expressed	gene	Lung seven transmembrane receptor domain containing protein, putative, expressed	chr5	22656704	22658758	+	three_prime_UTR,downstream
3	LOC_Os10g34030	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr10	18079268	18085216	-	CDS
3	LOC_Os02g55080	snf1-related kinase interactor 2, putative, expressed	gene	snf1-related kinase interactor 2, putative, expressed	chr2	33728521	33731460	-	CDS,downstream
3	LOC_Os06g40710	Myb-like DNA-binding domain containing protein, putative, expressed	gene	Myb-like DNA-binding domain containing protein, putative, expressed	chr6	24267883	24272745	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g09900	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr2	5121675	5125732	+	five_prime_UTR,CDS
3	LOC_Os02g39870	co-chaperone GrpE protein, putative, expressed	gene	co-chaperone GrpE protein, putative, expressed	chr2	24085071	24088402	+	CDS
3	LOC_Os01g66700	beta-hexosaminidase precursor, putative, expressed	gene	beta-hexosaminidase precursor, putative, expressed	chr1	38739016	38744875	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g53750	nuclear prelamin A recognition factor, putative, expressed	gene	nuclear prelamin A recognition factor, putative, expressed	chr3	30803152	30807603	-	CDS,three_prime_UTR,downstream
3	LOC_Os02g02840	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr2	1080513	1084283	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g55389	casein kinase II subunit alpha-1, putative, expressed	gene	casein kinase II subunit alpha-1, putative, expressed	chr3	31501689	31507338	-	CDS,promoter
3	LOC_Os04g53640	peroxidase precursor, putative, expressed	gene	peroxidase precursor, putative, expressed	chr4	31785735	31787713	+	CDS,promoter
3	LOC_Os05g02670	kinesin motor domain containing protein, putative, expressed	gene	kinesin motor domain containing protein, putative, expressed	chr5	940409	946992	+	CDS,downstream
3	LOC_Os03g15900	SH3 domain containing protein, expressed	gene	SH3 domain containing protein, expressed	chr3	8775121	8784992	+	CDS,three_prime_UTR
3	LOC_Os05g22260	crooked neck, putative, expressed	gene	crooked neck, putative, expressed	chr5	12544047	12549054	-	CDS,three_prime_UTR
3	LOC_Os03g47540	hypothetical protein	gene	hypothetical protein	chr3	26875100	26878311	+	CDS,downstream
3	LOC_Os08g03420	kelch repeat protein, putative, expressed	gene	kelch repeat protein, putative, expressed	chr8	1599718	1603908	+	three_prime_UTR
3	LOC_Os08g30980	hypothetical protein	gene	hypothetical protein	chr8	19121719	19125014	+	CDS
3	LOC_Os03g51080	glutamate decarboxylase, putative, expressed	gene	glutamate decarboxylase, putative, expressed	chr3	29193262	29201802	+	CDS
3	LOC_Os04g17660	rhodanese-like domain containing protein, putative, expressed	gene	rhodanese-like domain containing protein, putative, expressed	chr4	9661927	9664845	-	three_prime_UTR
3	LOC_Os07g02210	eukaryotic translation initiation factor 5A, putative, expressed	gene	eukaryotic translation initiation factor 5A, putative, expressed	chr7	702009	704502	+	CDS,three_prime_UTR
3	LOC_Os11g37510	ribosomal protein L4, putative, expressed	gene	ribosomal protein L4, putative, expressed	chr11	21673789	21677750	+	CDS,three_prime_UTR
3	LOC_Os05g41220	SNF1-related protein kinase regulatory subunit beta-1, putative, expressed	gene	SNF1-related protein kinase regulatory subunit beta-1, putative, expressed	chr5	24074994	24078421	-	CDS,three_prime_UTR
3	LOC_Os09g34180	formin, putative, expressed	gene	formin, putative, expressed	chr9	20179233	20182554	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g07380	frigida, putative, expressed	gene	frigida, putative, expressed	chr9	3668979	3674560	-	CDS,three_prime_UTR
3	LOC_Os04g58190	dof zinc finger domain containing protein, putative, expressed	gene	dof zinc finger domain containing protein, putative, expressed	chr4	34469181	34471812	-	three_prime_UTR,promoter
3	LOC_Os06g17830	oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed	gene	oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed	chr6	10340178	10342173	+	CDS,downstream
3	LOC_Os03g51030	phytochrome A, putative, expressed	gene	phytochrome A, putative, expressed	chr3	29161194	29169164	-	CDS,three_prime_UTR
3	LOC_Os08g45180	kinase, pfkB family, putative, expressed	gene	kinase, pfkB family, putative, expressed	chr8	28367854	28373251	+	three_prime_UTR,CDS
3	LOC_Os03g19960	ATP-dependent RNA helicase, putative, expressed	gene	ATP-dependent RNA helicase, putative, expressed	chr3	11236504	11240322	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g31290	membrane-anchored ubiquitin-fold protein, putative, expressed	gene	membrane-anchored ubiquitin-fold protein, putative, expressed	chr3	17822960	17826488	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g43164	expressed protein	gene	expressed protein	chr4	25366019	25368660	-	CDS
3	LOC_Os04g31040	violaxanthin de-epoxidase, putative, expressed	gene	violaxanthin de-epoxidase, putative, expressed	chr4	18379283	18381846	-	three_prime_UTR,promoter
3	LOC_Os11g05700	ABC transporter family protein, putative, expressed	gene	ABC transporter family protein, putative, expressed	chr11	2601649	2606448	-	five_prime_UTR,CDS,downstream
3	LOC_Os02g51160	hydrolase, acting on carbon-nitrogen, putative, expressed	gene	hydrolase, acting on carbon-nitrogen, putative, expressed	chr2	31297597	31300681	+	CDS,promoter,downstream
3	LOC_Os03g57430	expressed protein	gene	expressed protein	chr3	32737582	32743934	+	CDS,three_prime_UTR
3	LOC_Os07g29610	PQ loop repeat domain containing protein, expressed	gene	PQ loop repeat domain containing protein, expressed	chr7	17403319	17408853	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os12g13940	DNA-binding storekeeper protein-related, putative, expressed	gene	DNA-binding storekeeper protein-related, putative, expressed	chr12	7916883	7918044	+	three_prime_UTR,downstream
3	LOC_Os02g54510	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr2	33380337	33387027	+	CDS,three_prime_UTR
3	LOC_Os02g06790	expressed protein	gene	expressed protein	chr2	3428545	3431073	-	CDS,three_prime_UTR,downstream
3	LOC_Os06g12590	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr6	6821980	6831863	-	CDS,three_prime_UTR
3	LOC_Os02g39050	pre-mRNA-splicing factor ISY1, putative, expressed	gene	pre-mRNA-splicing factor ISY1, putative, expressed	chr2	23572529	23574978	-	three_prime_UTR,promoter
3	LOC_Os01g31770	oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed	gene	oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed	chr1	17393223	17403446	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g53440	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr4	31634353	31638374	+	CDS,three_prime_UTR
3	LOC_Os09g07450	flavonol synthase, putative	gene	flavonol synthase, putative	chr9	3725392	3729896	-	CDS,promoter
3	LOC_Os01g62840	mannose-1-phosphate guanyltransferase, putative, expressed	gene	mannose-1-phosphate guanyltransferase, putative, expressed	chr1	36394443	36397142	+	CDS,downstream
3	LOC_Os05g08950	phosphoribosyl transferase, putative, expressed	gene	phosphoribosyl transferase, putative, expressed	chr5	4947656	4951852	-	CDS
3	LOC_Os06g20354	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr6	11692032	11694279	+	three_prime_UTR,downstream
3	LOC_Os01g32130	expressed protein	gene	expressed protein	chr1	17582599	17585264	+	CDS,three_prime_UTR
3	LOC_Os03g61560	expressed protein	gene	expressed protein	chr3	34899493	34904897	-	CDS,three_prime_UTR
3	LOC_Os05g32500	expressed protein	gene	expressed protein	chr5	18930800	18935244	-	CDS,three_prime_UTR
3	LOC_Os04g01520	expressed protein	gene	expressed protein	chr4	356591	359448	-	three_prime_UTR
3	LOC_Os08g39210	OsWAK74 - OsWAK receptor-like protein kinase, expressed	gene	OsWAK74 - OsWAK receptor-like protein kinase, expressed	chr8	24764629	24768176	-	CDS
3	LOC_Os01g45060	polygalacturonase, putative	gene	polygalacturonase, putative	chr1	25578758	25582721	+	CDS,downstream
3	LOC_Os02g21280	POEI30 - Pollen Ole e I allergen and extensin family protein precursor, expressed	gene	POEI30 - Pollen Ole e I allergen and extensin family protein precursor, expressed	chr2	12630040	12633503	-	CDS,three_prime_UTR
3	LOC_Os08g04840	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr8	2432790	2435916	+	CDS,three_prime_UTR
3	LOC_Os03g12710	clathrin adaptor complex small chain domain containing protein, expressed	gene	clathrin adaptor complex small chain domain containing protein, expressed	chr3	6781682	6784978	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g08544	homeobox protein knotted-1, putative, expressed	gene	homeobox protein knotted-1, putative, expressed	chr2	4625392	4628865	+	CDS,three_prime_UTR
3	LOC_Os06g39870	26S protease regulatory subunit 8, putative, expressed	gene	26S protease regulatory subunit 8, putative, expressed	chr6	23684182	23687299	+	CDS,three_prime_UTR
3	LOC_Os04g40420	SWIRM domain containing protein, expressed	gene	SWIRM domain containing protein, expressed	chr4	23836259	23841065	+	CDS,three_prime_UTR
3	LOC_Os11g36420	sialyltransferase family domain containing protein, expressed	gene	sialyltransferase family domain containing protein, expressed	chr11	21009571	21013593	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g37890	NAD dependent epimerase/dehydratase family protein, putative, expressed	gene	NAD dependent epimerase/dehydratase family protein, putative, expressed	chr11	21993671	21998552	-	CDS,three_prime_UTR
3	LOC_Os05g49780	histone-like transcription factor and archaeal histone, putative, expressed	gene	histone-like transcription factor and archaeal histone, putative, expressed	chr5	28509763	28512588	+	CDS,three_prime_UTR
3	LOC_Os02g20394	dnaJ domain containing protein, expressed	gene	dnaJ domain containing protein, expressed	chr2	12019005	12023443	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g34450	14-3-3 protein, putative, expressed	gene	14-3-3 protein, putative, expressed	chr11	19712327	19715505	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g14990	expressed protein	gene	expressed protein	chr11	8437826	8440689	-	three_prime_UTR,promoter,downstream
3	LOC_Os02g04120	cytidylyltransferase domain containing protein, expressed	gene	cytidylyltransferase domain containing protein, expressed	chr2	1793652	1797589	+	CDS,three_prime_UTR,promoter
3	LOC_Os02g06890	OTU-like cysteine protease family protein, putative, expressed	gene	OTU-like cysteine protease family protein, putative, expressed	chr2	3470532	3474166	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g50350	coatomer alpha subunit, putative, expressed	gene	coatomer alpha subunit, putative, expressed	chr3	28723938	28729387	-	CDS,three_prime_UTR
3	LOC_Os10g06610	expressed protein	gene	expressed protein	chr10	3423077	3431487	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g05860	6-phosphofructokinase, putative, expressed	gene	6-phosphofructokinase, putative, expressed	chr6	2677975	2682782	-	CDS,three_prime_UTR
3	LOC_Os09g38420	cysteinyl-tRNA synthetase, putative, expressed	gene	cysteinyl-tRNA synthetase, putative, expressed	chr9	22113719	22119509	-	CDS,three_prime_UTR
3	LOC_Os10g34810	expressed protein	gene	expressed protein	chr10	18516833	18519538	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g32536	expressed protein	gene	expressed protein	chr12	19605959	19609455	+	three_prime_UTR,downstream
3	LOC_Os02g13640	protein phosphatase 1 regulatory subunit SDS22, putative, expressed	gene	protein phosphatase 1 regulatory subunit SDS22, putative, expressed	chr2	7316388	7319489	+	CDS,three_prime_UTR
3	LOC_Os03g48170	5-AMP-activated protein kinase-related, putative, expressed	gene	5-AMP-activated protein kinase-related, putative, expressed	chr3	27401327	27406295	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g01160	dehydrogenase, putative	gene	dehydrogenase, putative	chr12	92091	94423	+	CDS,downstream
3	LOC_Os02g49332	CSLE2 - cellulose synthase-like family E, expressed	gene	CSLE2 - cellulose synthase-like family E, expressed	chr2	30142989	30148274	+	five_prime_UTR,CDS,promoter
3	LOC_Os06g22380	expressed protein	gene	expressed protein	chr6	12989975	12999962	-	CDS,three_prime_UTR
3	LOC_Os04g53690	expressed protein	gene	expressed protein	chr4	31814259	31817648	+	CDS,three_prime_UTR,five_prime_UTR,downstream
3	LOC_Os03g17470	IN2-1 protein, putative, expressed	gene	IN2-1 protein, putative, expressed	chr3	9711160	9713985	-	CDS
3	LOC_Os03g04590	ribosomal protein, putative, expressed	gene	ribosomal protein, putative, expressed	chr3	2141721	2144522	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g16490	expressed protein	gene	expressed protein	chr2	9409105	9413646	+	five_prime_UTR,three_prime_UTR,downstream
3	LOC_Os01g25610	40S ribosomal protein S4, putative, expressed	gene	40S ribosomal protein S4, putative, expressed	chr1	14512295	14514420	+	CDS,three_prime_UTR
3	LOC_Os04g56630	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr4	33579853	33587269	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g51290	HVA22, putative, expressed	gene	HVA22, putative, expressed	chr2	31401276	31403855	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g58810	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr3	33481265	33486397	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g49680	DNA repair helicase XPB2, putative, expressed	gene	DNA repair helicase XPB2, putative, expressed	chr1	28544539	28552782	+	CDS,three_prime_UTR
3	LOC_Os02g58790	cell division inhibitor, putative, expressed	gene	cell division inhibitor, putative, expressed	chr2	35918037	35923865	+	CDS,three_prime_UTR
3	LOC_Os03g52150	metalloendopeptidase/ metallopeptidase/ zinc ion binding protein, putative, expressed	gene	metalloendopeptidase/ metallopeptidase/ zinc ion binding protein, putative, expressed	chr3	29930158	29939747	+	CDS
3	LOC_Os01g53840	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr1	30948334	30953694	-	CDS
3	LOC_Os02g29370	transposon protein, putative, Mariner sub-class	gene	transposon protein, putative, Mariner sub-class	chr2	17437564	17439723	-	CDS,downstream
3	LOC_Os12g01916	double-stranded RNA binding motif containing protein, expressed	gene	double-stranded RNA binding motif containing protein, expressed	chr12	534869	539349	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g24890	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr3	14175086	14179731	+	three_prime_UTR,CDS
3	LOC_Os11g14170	OsDegp12 - Putative Deg protease homologue, expressed	gene	OsDegp12 - Putative Deg protease homologue, expressed	chr11	7904958	7912868	+	CDS
3	LOC_Os07g33540	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr7	20039141	20042779	+	five_prime_UTR,CDS,downstream
3	LOC_Os02g02960	histone deacetylase complex subunit SAP18, putative, expressed	gene	histone deacetylase complex subunit SAP18, putative, expressed	chr2	1158885	1161300	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g54190	expressed protein	gene	expressed protein	chr1	31164627	31167731	+	three_prime_UTR,downstream
3	LOC_Os09g31380	jmjC domain-containing protein 5, putative	gene	jmjC domain-containing protein 5, putative	chr9	18862285	18866497	-	CDS
3	LOC_Os06g07090	AP-1 complex subunit gamma-1, putative, expressed	gene	AP-1 complex subunit gamma-1, putative, expressed	chr6	3375567	3385550	+	CDS,three_prime_UTR
3	LOC_Os02g55440	transmembrane 9 superfamily member, putative, expressed	gene	transmembrane 9 superfamily member, putative, expressed	chr2	33950422	33953880	-	three_prime_UTR
3	LOC_Os01g73900	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr1	42820120	42824081	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g12030	receptor-like protein kinase precursor, putative	gene	receptor-like protein kinase precursor, putative	chr2	6247083	6250599	-	CDS,downstream
3	LOC_Os05g39000	KIP1, putative, expressed	gene	KIP1, putative, expressed	chr5	22816127	22819515	-	CDS,three_prime_UTR
3	LOC_Os10g29540	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr10	15270653	15279763	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g38520	expressed protein	gene	expressed protein	chr11	22357154	22361496	-	CDS
3	LOC_Os03g10590	splicing factor, putative, expressed	gene	splicing factor, putative, expressed	chr3	5392933	5395987	-	CDS,three_prime_UTR
3	LOC_Os01g33720	hypothetical protein	gene	hypothetical protein	chr1	18557979	18558552	+	CDS,promoter,downstream
3	LOC_Os10g37210	FAD dependent oxidoreductase domain containing protein, expressed	gene	FAD dependent oxidoreductase domain containing protein, expressed	chr10	19836934	19842391	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g56710	GTP cyclohydrolase I 1, putative, expressed	gene	GTP cyclohydrolase I 1, putative, expressed	chr4	33629046	33633632	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os01g11370	ATP-dependent RNA helicase, putative, expressed	gene	ATP-dependent RNA helicase, putative, expressed	chr1	6111801	6124531	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g41070	bZIP transcription factor, putative, expressed	gene	bZIP transcription factor, putative, expressed	chr5	24000069	24003463	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g21660	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr8	12904545	12911486	-	CDS,three_prime_UTR
3	LOC_Os02g52280	expressed protein	gene	expressed protein	chr2	32002145	32011202	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g07440	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr9	3718390	3723265	-	CDS,downstream
3	LOC_Os07g41080	hydrolase, alpha/beta fold family domain containing protein	gene	hydrolase, alpha/beta fold family domain containing protein	chr7	24574168	24583265	-	CDS
3	LOC_Os03g57880	glucan endo-1,3-beta-glucosidase precursor, putative, expressed	gene	glucan endo-1,3-beta-glucosidase precursor, putative, expressed	chr3	32963752	32966187	+	three_prime_UTR,downstream
3	LOC_Os03g14300	THION29 - Plant thionin family protein precursor, expressed	gene	THION29 - Plant thionin family protein precursor, expressed	chr3	7787677	7788565	+	five_prime_UTR,three_prime_UTR,promoter,downstream
3	LOC_Os08g36774	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr8	23216332	23228346	-	CDS,three_prime_UTR
3	LOC_Os09g24530	ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor, putative, expressed	gene	ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor, putative, expressed	chr9	14606513	14608922	-	CDS,three_prime_UTR,downstream
3	LOC_Os10g34750	LIG1 - Putative DNA ligase I, expressed	gene	LIG1 - Putative DNA ligase I, expressed	chr10	18481509	18487884	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g08010	LTPL43 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed	gene	LTPL43 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed	chr2	4195421	4202350	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g07340	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr2	3778034	3791873	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g67170	expressed protein	gene	expressed protein	chr1	38985620	38989445	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g25870	elongation factor Tu, putative, expressed	gene	elongation factor Tu, putative, expressed	chr2	15149307	15154756	-	CDS,promoter,downstream
3	LOC_Os06g44080	ubiquitin family protein, putative, expressed	gene	ubiquitin family protein, putative, expressed	chr6	26584563	26587135	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g45420	armadillo/beta-catenin repeat family protein, putative, expressed	gene	armadillo/beta-catenin repeat family protein, putative, expressed	chr3	25636669	25640211	-	three_prime_UTR,promoter
3	LOC_Os03g55100	cyclic nucleotide-gated ion channel 2, putative, expressed	gene	cyclic nucleotide-gated ion channel 2, putative, expressed	chr3	31337819	31343721	+	CDS
3	LOC_Os01g54560	trehalose synthase, putative, expressed	gene	trehalose synthase, putative, expressed	chr1	31372363	31376501	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g32320	CCB1, putative, expressed	gene	CCB1, putative, expressed	chr11	18626553	18629016	+	CDS
3	LOC_Os02g10990	FAD binding domain of DNA photolyase domain containing protein, expressed	gene	FAD binding domain of DNA photolyase domain containing protein, expressed	chr2	5835517	5838974	+	CDS,promoter
3	LOC_Os07g47290	xylose isomerase, putative, expressed	gene	xylose isomerase, putative, expressed	chr7	28271322	28275642	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g37920	ZOS8-09 - C2H2 zinc finger protein, expressed	gene	ZOS8-09 - C2H2 zinc finger protein, expressed	chr8	24012309	24017941	+	CDS,three_prime_UTR
3	LOC_Os10g04674	disease resistance protein RPM1, putative, expressed	gene	disease resistance protein RPM1, putative, expressed	chr10	2225379	2236588	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os09g39790	lipase, putative, expressed	gene	lipase, putative, expressed	chr9	22810710	22813586	-	CDS,three_prime_UTR
3	LOC_Os02g52450	regulator of ribonuclease, putative, expressed	gene	regulator of ribonuclease, putative, expressed	chr2	32086779	32088940	-	five_prime_UTR
3	LOC_Os12g42130	MATE efflux family protein, putative, expressed	gene	MATE efflux family protein, putative, expressed	chr12	26086767	26089319	+	five_prime_UTR,CDS,promoter,downstream
3	LOC_Os11g47320	protein transporter, putative, expressed	gene	protein transporter, putative, expressed	chr11	27938848	27946591	-	CDS,three_prime_UTR
3	LOC_Os04g37670	steroid nuclear receptor, ligand-binding, putative, expressed	gene	steroid nuclear receptor, ligand-binding, putative, expressed	chr4	22211412	22216683	-	CDS
3	LOC_Os01g73460	ATXR, putative, expressed	gene	ATXR, putative, expressed	chr1	42566799	42572038	+	CDS,promoter,downstream
3	LOC_Os03g49250	OsFBO16 - F-box and other domain containing protein, expressed	gene	OsFBO16 - F-box and other domain containing protein, expressed	chr3	28039046	28041195	+	three_prime_UTR,downstream
3	LOC_Os08g13910	hypothetical protein	gene	hypothetical protein	chr8	8306782	8310542	+	CDS,promoter
3	LOC_Os04g52840	tyrosine protein kinase domain containing protein, putative, expressed	gene	tyrosine protein kinase domain containing protein, putative, expressed	chr4	31278003	31281301	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g44820	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr4	26347408	26350834	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g38730	SAC3/GANP family protein, putative, expressed	gene	SAC3/GANP family protein, putative, expressed	chr5	22662969	22671455	-	CDS,three_prime_UTR
3	LOC_Os03g04430	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr3	2054437	2057972	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g55640	OsSigP2 - Putative Type I Signal Peptidase homologue; employs a putative Ser/Lys catalytic dyad, expressed	gene	OsSigP2 - Putative Type I Signal Peptidase homologue; employs a putative Ser/Lys catalytic dyad, expressed	chr3	31674920	31677934	-	three_prime_UTR,promoter
3	LOC_Os04g59620	SNF2 family N-terminal domain containing protein, expressed	gene	SNF2 family N-terminal domain containing protein, expressed	chr4	35260797	35266088	-	CDS,promoter,downstream
3	LOC_Os01g56890	expressed protein	gene	expressed protein	chr1	32854231	32857057	-	three_prime_UTR,CDS
3	LOC_Os12g18150	ZOS12-04 - C2H2 zinc finger protein, expressed	gene	ZOS12-04 - C2H2 zinc finger protein, expressed	chr12	10465595	10475811	-	CDS,three_prime_UTR
3	LOC_Os05g35200	glycosyl transferase, putative, expressed	gene	glycosyl transferase, putative, expressed	chr5	20835745	20841082	-	five_prime_UTR,promoter
3	LOC_Os11g03890	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr11	1550980	1553325	+	three_prime_UTR,downstream
3	LOC_Os08g40930	Alpha amylase, catalytic domain containing protein, expressed	gene	Alpha amylase, catalytic domain containing protein, expressed	chr8	25889677	25897862	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g50540	expressed protein	gene	expressed protein	chr2	30853198	30854932	+	three_prime_UTR,downstream
3	LOC_Os05g33020	preprotein translocase subunit secY, putative, expressed	gene	preprotein translocase subunit secY, putative, expressed	chr5	19283510	19290869	-	CDS,three_prime_UTR
3	LOC_Os10g03850	OsFBX352 - F-box domain containing protein, expressed	gene	OsFBX352 - F-box domain containing protein, expressed	chr10	1742553	1751138	-	CDS,three_prime_UTR,five_prime_UTR
3	LOC_Os06g11620	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr6	6154941	6158889	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g54010	serine/threonine-protein kinase receptor precursor, putative, expressed	gene	serine/threonine-protein kinase receptor precursor, putative, expressed	chr4	32008785	32011495	-	CDS,promoter
3	LOC_Os11g04740	FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed	gene	FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed	chr11	2015624	2020096	-	CDS
3	LOC_Os03g17740	transporter, putative, expressed	gene	transporter, putative, expressed	chr3	9871141	9875531	+	CDS
3	LOC_Os03g13820	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr3	7481021	7486703	-	three_prime_UTR
3	LOC_Os06g04380	aminomethyltransferase, putative, expressed	gene	aminomethyltransferase, putative, expressed	chr6	1871635	1874912	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g21850	protein transport protein-related, putative, expressed	gene	protein transport protein-related, putative, expressed	chr1	12257112	12262020	-	CDS,three_prime_UTR
3	LOC_Os07g47360	CW-type Zinc Finger, putative, expressed	gene	CW-type Zinc Finger, putative, expressed	chr7	28323770	28334086	+	CDS,three_prime_UTR
3	LOC_Os01g16130	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr1	9099034	9101721	+	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os12g01560	PMR5, putative, expressed	gene	PMR5, putative, expressed	chr12	336846	340468	+	CDS,three_prime_UTR
3	LOC_Os07g27760	expressed protein	gene	expressed protein	chr7	16194835	16205022	-	CDS
3	LOC_Os01g45390	HD domain containing protein 2, putative, expressed	gene	HD domain containing protein 2, putative, expressed	chr1	25761445	25765481	+	CDS,three_prime_UTR
3	LOC_Os04g32370	hydroxyproline-rich glycoprotein family protein, putative, expressed	gene	hydroxyproline-rich glycoprotein family protein, putative, expressed	chr4	19239454	19246769	+	CDS
3	LOC_Os07g09720	phosphoacetylglucosamine mutase, putative, expressed	gene	phosphoacetylglucosamine mutase, putative, expressed	chr7	5178087	5181753	-	CDS
3	LOC_Os11g41540	disease resistance RPP8-like protein 3, putative, expressed	gene	disease resistance RPP8-like protein 3, putative, expressed	chr11	24445341	24450890	+	CDS,three_prime_UTR
3	LOC_Os08g02550	proteasome subunit, putative, expressed	gene	proteasome subunit, putative, expressed	chr8	1049620	1054102	+	CDS,promoter
3	LOC_Os01g54850	OsFBX24 - F-box domain containing protein, expressed	gene	OsFBX24 - F-box domain containing protein, expressed	chr1	31549611	31552008	+	three_prime_UTR,downstream
3	LOC_Os11g05650	mRNA-decapping enzyme, putative, expressed	gene	mRNA-decapping enzyme, putative, expressed	chr11	2561056	2564407	+	CDS,three_prime_UTR
3	LOC_Os11g42420	nuclear pore protein 84/107 containing protein, expressed	gene	nuclear pore protein 84/107 containing protein, expressed	chr11	25062071	25071305	+	CDS,three_prime_UTR
3	LOC_Os01g48180	DDT domain containing protein, putative, expressed	gene	DDT domain containing protein, putative, expressed	chr1	27586333	27597791	+	CDS
3	LOC_Os09g25865	hypothetical protein	gene	hypothetical protein	chr9	15501456	15507093	+	five_prime_UTR
3	LOC_Os07g42826	unknown	gene	unknown	chr7	25648922	25650727	+	three_prime_UTR,downstream
3	LOC_Os08g37820	expressed protein	gene	expressed protein	chr8	23954323	23958248	+	three_prime_UTR
3	LOC_Os01g21820	preprotein translocase subunit secA, chloroplast precursor, putative, expressed	gene	preprotein translocase subunit secA, chloroplast precursor, putative, expressed	chr1	12234236	12247187	-	CDS
3	LOC_Os12g38460	RNA recognition motif family protein	gene	RNA recognition motif family protein	chr12	23572909	23577850	-	CDS
3	LOC_Os07g27790	glutamate--cysteine ligase, chloroplast precursor, putative, expressed	gene	glutamate--cysteine ligase, chloroplast precursor, putative, expressed	chr7	16212461	16217087	-	CDS,three_prime_UTR
3	LOC_Os06g33180	expressed protein	gene	expressed protein	chr6	19314140	19319710	+	CDS,three_prime_UTR
3	LOC_Os06g06190	uncharacterized protein ycf45, putative, expressed	gene	uncharacterized protein ycf45, putative, expressed	chr6	2862412	2866707	+	CDS,three_prime_UTR
3	LOC_Os02g57620	Citrate transporter protein, putative, expressed	gene	Citrate transporter protein, putative, expressed	chr2	35280916	35284847	+	CDS
3	LOC_Os02g56219	acetyltransferase, GNAT family, putative, expressed	gene	acetyltransferase, GNAT family, putative, expressed	chr2	34376415	34382312	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g56565	endoribonuclease, putative, expressed	gene	endoribonuclease, putative, expressed	chr2	34643777	34647544	+	CDS,promoter
3	LOC_Os05g06360	heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed	gene	heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed	chr5	3257544	3262821	+	CDS
3	LOC_Os04g42140	eukaryotic initiation factor iso-4F subunit p82-34, putative, expressed	gene	eukaryotic initiation factor iso-4F subunit p82-34, putative, expressed	chr4	24760952	24767143	-	CDS,three_prime_UTR
3	LOC_Os05g16630	thioredoxin domain-containing protein 9, putative, expressed	gene	thioredoxin domain-containing protein 9, putative, expressed	chr5	9432304	9436065	+	CDS,three_prime_UTR
3	LOC_Os02g30230	exo70 exocyst complex subunit domain containing protein, expressed	gene	exo70 exocyst complex subunit domain containing protein, expressed	chr2	17969420	17975238	+	three_prime_UTR
3	LOC_Os04g40130	Rf1, mitochondrial precursor, putative, expressed	gene	Rf1, mitochondrial precursor, putative, expressed	chr4	23697519	23700085	-	CDS,three_prime_UTR
3	LOC_Os04g49530	expressed protein	gene	expressed protein	chr4	29353602	29357434	+	CDS,three_prime_UTR
3	LOC_Os05g38190	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr5	22335330	22341397	+	three_prime_UTR,promoter,downstream
3	LOC_Os03g61600	phosphoribosylformylglycinamidine synthase, putative, expressed	gene	phosphoribosylformylglycinamidine synthase, putative, expressed	chr3	34916732	34919576	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g39220	delta14-sterol reductase, putative, expressed	gene	delta14-sterol reductase, putative, expressed	chr9	22536132	22540257	+	CDS,three_prime_UTR,promoter
3	LOC_Os07g37750	ATMIN7, putative, expressed	gene	ATMIN7, putative, expressed	chr7	22633764	22644674	-	CDS,three_prime_UTR
3	LOC_Os06g02260	callose synthase, putative, expressed	gene	callose synthase, putative, expressed	chr6	723963	729614	-	CDS,three_prime_UTR
3	LOC_Os01g12430	receptor-like protein kinase, putative, expressed	gene	receptor-like protein kinase, putative, expressed	chr1	6789657	6792346	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g47194	GEX1, putative, expressed	gene	GEX1, putative, expressed	chr7	28209047	28212952	-	three_prime_UTR,promoter,downstream
3	LOC_Os06g51150	catalase isozyme B, putative, expressed	gene	catalase isozyme B, putative, expressed	chr6	30943198	30947368	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g57400	methylthioribose kinase, putative, expressed	gene	methylthioribose kinase, putative, expressed	chr4	33970320	33973601	-	CDS,three_prime_UTR
3	LOC_Os03g02100	valyl-tRNA synthetase, putative, expressed	gene	valyl-tRNA synthetase, putative, expressed	chr3	665219	673056	+	CDS
3	LOC_Os10g29240	expressed protein	gene	expressed protein	chr10	15149426	15151888	-	three_prime_UTR,promoter
3	LOC_Os06g47200	LTPL85 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	gene	LTPL85 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	chr6	28616449	28619323	+	three_prime_UTR,CDS,downstream
3	LOC_Os12g32820	pleiotropic drug resistance protein 3, putative, expressed	gene	pleiotropic drug resistance protein 3, putative, expressed	chr12	19804196	19808551	-	CDS
3	LOC_Os04g33880	HVA22, putative, expressed	gene	HVA22, putative, expressed	chr4	20354109	20356301	+	CDS,three_prime_UTR
3	LOC_Os08g40880	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr8	25856300	25862164	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g28010	expressed protein	gene	expressed protein	chr4	16364171	16370724	+	CDS,three_prime_UTR
3	LOC_Os01g62040	ruvB-like, putative, expressed	gene	ruvB-like, putative, expressed	chr1	35901917	35907283	+	CDS,three_prime_UTR
3	LOC_Os01g73570	vacuolar protein sorting 55 family protein, putative, expressed	gene	vacuolar protein sorting 55 family protein, putative, expressed	chr1	42620787	42623707	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g57990	methionine adenosyltransferase regulatory beta subunit-related, putative, expressed	gene	methionine adenosyltransferase regulatory beta subunit-related, putative, expressed	chr2	35501286	35505011	+	CDS,three_prime_UTR,five_prime_UTR
3	LOC_Os06g22080	diacylglycerol O-acyltransferase, putative, expressed	gene	diacylglycerol O-acyltransferase, putative, expressed	chr6	12808567	12811496	+	three_prime_UTR,CDS
3	LOC_Os07g41360	alpha-1,4-glucan-protein synthase, putative, expressed	gene	alpha-1,4-glucan-protein synthase, putative, expressed	chr7	24772282	24775532	+	CDS,three_prime_UTR
3	LOC_Os04g05010	CBS domain containing membrane protein, putative, expressed	gene	CBS domain containing membrane protein, putative, expressed	chr4	2422332	2425100	-	CDS
3	LOC_Os12g02280	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr12	717524	721216	+	CDS,three_prime_UTR
3	LOC_Os08g05670	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr8	3030285	3037468	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g64280	sorting nexin 1, putative, expressed	gene	sorting nexin 1, putative, expressed	chr1	37314248	37319474	-	CDS,three_prime_UTR
3	LOC_Os02g10200	zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed	gene	zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed	chr2	5345589	5347486	-	three_prime_UTR,promoter
3	LOC_Os10g06540	vesicle-associated membrane protein, putative, expressed	gene	vesicle-associated membrane protein, putative, expressed	chr10	3356988	3359531	-	three_prime_UTR,promoter
3	LOC_Os05g01262	translocon-associated protein beta domain containing protein, expressed	gene	translocon-associated protein beta domain containing protein, expressed	chr5	182375	184800	-	three_prime_UTR,promoter
3	LOC_Os01g39010	50S ribosomal protein, putative, expressed	gene	50S ribosomal protein, putative, expressed	chr1	21932219	21935027	+	CDS,three_prime_UTR
3	LOC_Os10g42500	PAP fibrillin family domain containing protein, expressed	gene	PAP fibrillin family domain containing protein, expressed	chr10	22848991	22851926	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g40820	ribosomal protein L24, putative, expressed	gene	ribosomal protein L24, putative, expressed	chr5	23877211	23880597	-	five_prime_UTR,CDS
3	LOC_Os03g01750	dual specificity protein phosphatase, putative, expressed	gene	dual specificity protein phosphatase, putative, expressed	chr3	470451	475737	-	CDS,three_prime_UTR
3	LOC_Os11g38010	targeting protein for Xklp2, putative, expressed	gene	targeting protein for Xklp2, putative, expressed	chr11	22084084	22088761	+	CDS
3	LOC_Os02g40810	Zinc finger, ZZ type domain containing protein, expressed	gene	Zinc finger, ZZ type domain containing protein, expressed	chr2	24722376	24727302	-	CDS,three_prime_UTR
3	LOC_Os07g42940	CAMK_CAMK_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr7	25716766	25721221	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os06g50840	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr6	30761490	30767203	+	CDS,three_prime_UTR
3	LOC_Os04g54930	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr4	32486806	32493209	-	CDS
3	LOC_Os05g30860	expressed protein	gene	expressed protein	chr5	17853698	17857297	-	three_prime_UTR
3	LOC_Os07g28400	CDGSH iron sulfur domain-containing protein 1, putative, expressed	gene	CDGSH iron sulfur domain-containing protein 1, putative, expressed	chr7	16598918	16601043	-	CDS,three_prime_UTR
3	LOC_Os07g45780	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	27329322	27332506	+	CDS,downstream
3	LOC_Os07g28790	PAP fibrillin family domain containing protein, expressed	gene	PAP fibrillin family domain containing protein, expressed	chr7	16856199	16861650	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g48420	peroxiredoxin, putative, expressed	gene	peroxiredoxin, putative, expressed	chr1	27744560	27746887	-	CDS,three_prime_UTR
3	LOC_Os01g02040	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr1	553022	557015	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g46320	inactive receptor kinase At2g26730 precursor, putative, expressed	gene	inactive receptor kinase At2g26730 precursor, putative, expressed	chr4	27275691	27278353	-	CDS,three_prime_UTR
3	LOC_Os01g36590	nodulin, putative	gene	nodulin, putative	chr1	20303839	20309340	-	CDS,promoter,downstream
3	LOC_Os02g39200	nucleotide-sugar transporter family protein, putative, expressed	gene	nucleotide-sugar transporter family protein, putative, expressed	chr2	23671476	23676796	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g26000	OsFBX235 - F-box domain containing protein, expressed	gene	OsFBX235 - F-box domain containing protein, expressed	chr7	14915043	14919457	+	CDS
3	LOC_Os03g44530	GTPase of unknown function domain containing protein, putative, expressed	gene	GTPase of unknown function domain containing protein, putative, expressed	chr3	25060719	25064905	-	CDS,three_prime_UTR
3	LOC_Os01g15490	phosphoadenosine phosphosulfate, putative, expressed	gene	phosphoadenosine phosphosulfate, putative, expressed	chr1	8700159	8707630	-	CDS,three_prime_UTR
3	LOC_Os02g18940	expressed protein	gene	expressed protein	chr2	11066131	11067378	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g29430	citrate transporter, putative, expressed	gene	citrate transporter, putative, expressed	chr9	17880818	17884640	+	CDS,promoter
3	LOC_Os01g07980	ankyrin, putative, expressed	gene	ankyrin, putative, expressed	chr1	3857824	3860839	-	CDS
3	LOC_Os09g39670	oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed	gene	oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed	chr9	22762384	22766488	+	CDS,promoter
3	LOC_Os03g25070	CAMK_CAMK_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr3	14314776	14322158	+	CDS
3	LOC_Os02g38430	steroid nuclear receptor, ligand-binding, putative, expressed	gene	steroid nuclear receptor, ligand-binding, putative, expressed	chr2	23231284	23235556	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g32550	dimethyladenosine transferase, putative, expressed	gene	dimethyladenosine transferase, putative, expressed	chr7	19402529	19404141	+	three_prime_UTR,downstream
3	LOC_Os01g61580	selT-like protein precursor, putative, expressed	gene	selT-like protein precursor, putative, expressed	chr1	35608571	35612060	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g41660	phosphoethanolamine/phosphocholine phosphatase, putative, expressed	gene	phosphoethanolamine/phosphocholine phosphatase, putative, expressed	chr1	23582937	23585115	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g06990	expressed protein	gene	expressed protein	chr7	3443958	3445868	+	three_prime_UTR,CDS,downstream
3	LOC_Os07g33997	60S ribosomal protein L44, putative, expressed	gene	60S ribosomal protein L44, putative, expressed	chr7	20309042	20311118	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g32660	cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed	gene	cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed	chr4	19512969	19516121	+	CDS,three_prime_UTR
3	LOC_Os07g33670	patatin-like phospholipase family protein, expressed	gene	patatin-like phospholipase family protein, expressed	chr7	20114234	20122101	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g74520	methyltransferase domain containing protein, putative, expressed	gene	methyltransferase domain containing protein, putative, expressed	chr1	43158453	43161805	-	CDS,downstream
3	LOC_Os05g41000	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	gene	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	chr5	23971030	23976491	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g54790	 ELMO/CED-12 family protein, putative, expressed	gene	 ELMO/CED-12 family protein, putative, expressed	chr4	32389296	32396575	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g30840	proteasome subunit, putative, expressed	gene	proteasome subunit, putative, expressed	chr7	18252481	18256984	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g24930	expressed protein	gene	expressed protein	chr8	15102341	15106684	+	CDS,promoter
3	LOC_Os01g25600	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr1	14505647	14512138	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os11g11000	 ELMO/CED-12 family protein, putative, expressed	gene	 ELMO/CED-12 family protein, putative, expressed	chr11	6063986	6069551	-	CDS
3	LOC_Os05g32130	conserved hypothetical protein	gene	conserved hypothetical protein	chr5	18669907	18672111	+	CDS,promoter
3	LOC_Os01g68510	peptide transporter PTR2, putative, expressed	gene	peptide transporter PTR2, putative, expressed	chr1	39809260	39814163	+	CDS
3	LOC_Os03g62260	FAD binding domain containing protein, expressed	gene	FAD binding domain containing protein, expressed	chr3	35252136	35257427	-	CDS,three_prime_UTR
3	LOC_Os02g07190	expressed protein	gene	expressed protein	chr2	3694689	3699524	+	CDS,downstream
3	LOC_Os07g41330	mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	gene	mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	chr7	24758388	24762554	-	three_prime_UTR
3	LOC_Os02g09840	serine/threonine-protein phosphatase 2A regulatory subunit B subunitbeta, putative, expressed	gene	serine/threonine-protein phosphatase 2A regulatory subunit B subunitbeta, putative, expressed	chr2	5071312	5075533	-	CDS,three_prime_UTR
3	LOC_Os05g35540	GTPase of unknown function domain containing protein, putative, expressed	gene	GTPase of unknown function domain containing protein, putative, expressed	chr5	21063460	21067086	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g43830	3-isopropylmalate dehydratase small subunit 2, putative, expressed	gene	3-isopropylmalate dehydratase small subunit 2, putative, expressed	chr2	26459722	26463411	-	three_prime_UTR
3	LOC_Os03g52594	CCR4-NOT transcription factor, putative, expressed	gene	CCR4-NOT transcription factor, putative, expressed	chr3	30150022	30166976	-	CDS,three_prime_UTR
3	LOC_Os06g40050	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr6	23822464	23826299	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g62850	membrane associated DUF588 domain containing protein, putative, expressed	gene	membrane associated DUF588 domain containing protein, putative, expressed	chr1	36397915	36400734	-	CDS,promoter
3	LOC_Os12g09190	expressed protein	gene	expressed protein	chr12	4795465	4799050	+	CDS,three_prime_UTR
3	LOC_Os05g40200	inactive receptor kinase At2g26730 precursor, putative, expressed	gene	inactive receptor kinase At2g26730 precursor, putative, expressed	chr5	23542840	23548427	-	CDS
3	LOC_Os09g02729	phospholipase C, putative, expressed	gene	phospholipase C, putative, expressed	chr9	1225547	1237533	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g46510	OsFBX103 - F-box domain containing protein, expressed	gene	OsFBX103 - F-box domain containing protein, expressed	chr3	26310086	26312533	+	three_prime_UTR,downstream
3	LOC_Os05g03070	transporter, putative, expressed	gene	transporter, putative, expressed	chr5	1198612	1201031	-	three_prime_UTR
3	LOC_Os01g48140	pentatricopeptide containing protein, putative	gene	pentatricopeptide containing protein, putative	chr1	27564788	27569429	-	CDS
3	LOC_Os06g12990	tRNA methyltransferase, putative, expressed	gene	tRNA methyltransferase, putative, expressed	chr6	7117830	7119449	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g30350	expressed protein	gene	expressed protein	chr9	18468701	18473198	-	CDS,promoter
3	LOC_Os07g48890	expressed protein	gene	expressed protein	chr7	29253454	29258945	+	CDS
3	LOC_Os10g35644	expressed protein	gene	expressed protein	chr10	18991413	18994766	+	three_prime_UTR,CDS
3	LOC_Os06g02220	MTA/SAH nucleosidase, putative, expressed	gene	MTA/SAH nucleosidase, putative, expressed	chr6	691755	694752	+	CDS,three_prime_UTR
3	LOC_Os01g16330	OsRhmbd2 - Putative Rhomboid homologue, expressed	gene	OsRhmbd2 - Putative Rhomboid homologue, expressed	chr1	9258137	9263342	+	CDS,three_prime_UTR
3	LOC_Os04g54340	double-strand break repair protein MRE11, putative, expressed	gene	double-strand break repair protein MRE11, putative, expressed	chr4	32157469	32163336	+	CDS,downstream
3	LOC_Os07g46300	expressed protein	gene	expressed protein	chr7	27619773	27622662	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g39760	VHS and GAT domain containing protein, expressed	gene	VHS and GAT domain containing protein, expressed	chr5	23289137	23293955	+	CDS
3	LOC_Os01g18840	IF, putative, expressed	gene	IF, putative, expressed	chr1	10642263	10643824	+	CDS,three_prime_UTR
3	LOC_Os03g46681	expressed protein	gene	expressed protein	chr3	26413486	26415300	+	three_prime_UTR,downstream
3	LOC_Os02g04840	GHMP kinases ATP-binding protein, putative, expressed	gene	GHMP kinases ATP-binding protein, putative, expressed	chr2	2230652	2239525	-	CDS,three_prime_UTR
3	LOC_Os04g56640	mediator of RNA polymerase II transcription subunit 7, putative, expressed	gene	mediator of RNA polymerase II transcription subunit 7, putative, expressed	chr4	33589292	33592227	-	CDS,three_prime_UTR
3	LOC_Os04g58630	DNA mismatch repair protein MSH3, putative, expressed	gene	DNA mismatch repair protein MSH3, putative, expressed	chr4	34684888	34692063	-	three_prime_UTR,downstream
3	LOC_Os12g01930	lipase-related, putative, expressed	gene	lipase-related, putative, expressed	chr12	553438	557644	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g50840	BAH domain containing protein, putative, expressed	gene	BAH domain containing protein, putative, expressed	chr2	31058195	31065396	+	CDS,three_prime_UTR
3	LOC_Os05g15520	DNA-binding protein-related, putative, expressed	gene	DNA-binding protein-related, putative, expressed	chr5	8777882	8782469	-	CDS
3	LOC_Os03g22120	sucrose synthase, putative, expressed	gene	sucrose synthase, putative, expressed	chr3	12673180	12679375	-	CDS
3	LOC_Os10g22380	glutamyl-tRNA synthetase, cytoplasmic, putative, expressed	gene	glutamyl-tRNA synthetase, cytoplasmic, putative, expressed	chr10	11510065	11514103	-	three_prime_UTR,CDS,promoter
3	LOC_Os11g20360	expressed protein	gene	expressed protein	chr11	11769454	11774874	+	three_prime_UTR,CDS
3	LOC_Os12g07140	expressed protein	gene	expressed protein	chr12	3498421	3501238	-	three_prime_UTR,promoter,downstream
3	LOC_Os01g37790	expressed protein	gene	expressed protein	chr1	21137825	21142049	+	CDS,downstream
3	LOC_Os11g40080	lipin, N-terminal conserved region family protein, expressed	gene	lipin, N-terminal conserved region family protein, expressed	chr11	23436482	23443064	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g40840	conserved hypothetical protein	gene	conserved hypothetical protein	chr3	22708604	22711676	-	CDS,downstream
3	LOC_Os08g37300	expressed protein	gene	expressed protein	chr8	23572851	23573596	+	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g71300	S-formylglutathione hydrolase, putative, expressed	gene	S-formylglutathione hydrolase, putative, expressed	chr1	41250183	41271276	+	CDS,three_prime_UTR,promoter
3	LOC_Os06g04800	peptidase, T1 family, putative, expressed	gene	peptidase, T1 family, putative, expressed	chr6	2090206	2093692	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g18180	ranBP1 domain containing protein, expressed	gene	ranBP1 domain containing protein, expressed	chr3	10186345	10189247	-	CDS,downstream
3	LOC_Os03g03920	Ubiquitin family domain containing protein, expressed	gene	Ubiquitin family domain containing protein, expressed	chr3	1790568	1795419	-	three_prime_UTR,CDS
3	LOC_Os01g69210	mannosyl-oligosaccharide glucosidase, putative, expressed	gene	mannosyl-oligosaccharide glucosidase, putative, expressed	chr1	40219847	40228221	+	CDS,three_prime_UTR
3	LOC_Os04g56580	inositol 1,3,4,5,6-pentakisphosphate 2-kinase, putative, expressed	gene	inositol 1,3,4,5,6-pentakisphosphate 2-kinase, putative, expressed	chr4	33550023	33554291	-	CDS,three_prime_UTR,downstream
3	LOC_Os05g41630	translation initiation factor eIF3 subunit, putative, expressed	gene	translation initiation factor eIF3 subunit, putative, expressed	chr5	24314333	24315324	-	three_prime_UTR,promoter,downstream
3	LOC_Os04g44430	transporter, major facilitator family, putative, expressed	gene	transporter, major facilitator family, putative, expressed	chr4	26114305	26122622	+	CDS
3	LOC_Os02g20980	expressed protein	gene	expressed protein	chr2	12414326	12421423	-	three_prime_UTR
3	LOC_Os10g01480	Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed	gene	Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed	chr10	300771	307113	-	CDS,three_prime_UTR
3	LOC_Os08g43970	carrier, putative	gene	carrier, putative	chr8	27689317	27690045	+	CDS,promoter,downstream
3	LOC_Os05g44310	vesicle-fusing ATPase, putative, expressed	gene	vesicle-fusing ATPase, putative, expressed	chr5	25719156	25726003	-	CDS,three_prime_UTR,downstream
3	LOC_Os02g01245	hypothetical protein	gene	hypothetical protein	chr2	133473	134873	+	CDS,downstream
3	LOC_Os04g35430	PHD-finger domain containing protein, expressed	gene	PHD-finger domain containing protein, expressed	chr4	21387279	21394038	-	CDS
3	LOC_Os05g24160	double-stranded RNA binding motif containing protein, expressed	gene	double-stranded RNA binding motif containing protein, expressed	chr5	13882237	13889216	-	CDS,three_prime_UTR
3	LOC_Os04g57600	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	gene	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	chr4	34087541	34091558	-	CDS
3	LOC_Os12g02540	BTBN23 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed	gene	BTBN23 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed	chr12	863792	868553	-	CDS
3	LOC_Os02g53620	nuclear transcription factor Y subunit, putative, expressed	gene	nuclear transcription factor Y subunit, putative, expressed	chr2	32788356	32792476	-	CDS,three_prime_UTR
3	LOC_Os02g47600	soluble inorganic pyrophosphatase, putative, expressed	gene	soluble inorganic pyrophosphatase, putative, expressed	chr2	29075952	29080846	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g10350	NPGR1, putative, expressed	gene	NPGR1, putative, expressed	chr3	5275817	5280819	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os10g41390	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr10	22176223	22181852	+	CDS,promoter
3	LOC_Os05g49990	expressed protein	gene	expressed protein	chr5	28604528	28606259	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g43600	50S ribosomal protein L19, chloroplast precursor, putative, expressed	gene	50S ribosomal protein L19, chloroplast precursor, putative, expressed	chr2	26311625	26314566	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g35030	MDR-like ABC transporter, putative, expressed	gene	MDR-like ABC transporter, putative, expressed	chr1	19377124	19386153	+	CDS,downstream
3	LOC_Os01g16930	presenilin, putative, expressed	gene	presenilin, putative, expressed	chr1	9681542	9683146	-	three_prime_UTR,promoter,downstream
3	LOC_Os05g01635	expressed protein	gene	expressed protein	chr5	375945	378250	-	CDS,three_prime_UTR
3	LOC_Os02g54470	60S ribosomal protein L35a-3, putative, expressed	gene	60S ribosomal protein L35a-3, putative, expressed	chr2	33353475	33355613	+	three_prime_UTR
3	LOC_Os08g29124	expressed protein	gene	expressed protein	chr8	17819654	17835422	-	CDS,three_prime_UTR
3	LOC_Os11g20330	expressed protein	gene	expressed protein	chr11	11739247	11755319	-	three_prime_UTR
3	LOC_Os04g21660	AAA-type ATPase family protein, putative, expressed	gene	AAA-type ATPase family protein, putative, expressed	chr4	12243195	12249410	-	three_prime_UTR,promoter
3	LOC_Os02g02360	expressed protein	gene	expressed protein	chr2	785941	789235	+	CDS,three_prime_UTR
3	LOC_Os11g02300	CPuORF36 - conserved peptide uORF-containing transcript, expressed	gene	CPuORF36 - conserved peptide uORF-containing transcript, expressed	chr11	653977	660239	-	five_prime_UTR
3	LOC_Os02g35620	expressed protein	gene	expressed protein	chr2	21414053	21416497	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g07780	pentatricopeptide repeat protein PPR986-12, putative, expressed	gene	pentatricopeptide repeat protein PPR986-12, putative, expressed	chr9	3934205	3937411	-	CDS,promoter
3	LOC_Os09g04880	expressed protein	gene	expressed protein	chr9	2596219	2599726	+	three_prime_UTR,downstream
3	LOC_Os02g56940	expressed protein	gene	expressed protein	chr2	34895759	34898034	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g30710	DGCR14, putative, expressed	gene	DGCR14, putative, expressed	chr6	17811061	17815175	+	three_prime_UTR
3	LOC_Os01g39260	OsFtsH5  FtsH protease, homologue of AtFtsH4, expressed	gene	OsFtsH5  FtsH protease, homologue of AtFtsH4, expressed	chr1	22081211	22087338	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g37430	LSM domain containing protein, expressed	gene	LSM domain containing protein, expressed	chr2	22596458	22599889	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g62640	RNA-binding protein Luc7-like, putative, expressed	gene	RNA-binding protein Luc7-like, putative, expressed	chr3	35439307	35445340	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g70000	expressed protein	gene	expressed protein	chr1	40492651	40494672	+	three_prime_UTR,downstream
3	LOC_Os01g44110	serine/threonine-protein kinase, putative, expressed	gene	serine/threonine-protein kinase, putative, expressed	chr1	25280638	25285570	+	CDS
3	LOC_Os02g57400	2-phosphoglycerate kinase-related, putative, expressed	gene	2-phosphoglycerate kinase-related, putative, expressed	chr2	35164542	35169385	-	CDS,three_prime_UTR
3	LOC_Os01g53070	ATP binding protein, putative, expressed	gene	ATP binding protein, putative, expressed	chr1	30489702	30495678	-	CDS,promoter
3	LOC_Os01g42430	vacuolar ATP synthase, putative, expressed	gene	vacuolar ATP synthase, putative, expressed	chr1	24125505	24128583	+	CDS,three_prime_UTR
3	LOC_Os01g71690	recA protein, expressed	gene	recA protein, expressed	chr1	41538647	41544827	-	CDS
3	LOC_Os08g40230	expressed protein	gene	expressed protein	chr8	25441749	25447369	+	CDS,three_prime_UTR
3	LOC_Os04g51830	OsHKT1;4 - Na+ transporter, expressed	gene	OsHKT1;4 - Na+ transporter, expressed	chr4	30549056	30554207	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g33800	arabinogalactan protein, putative, expressed	gene	arabinogalactan protein, putative, expressed	chr9	19955242	19957623	+	three_prime_UTR,promoter
3	LOC_Os01g60910	CAMK_KIN1/SNF1/Nim1_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_KIN1/SNF1/Nim1_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr1	35227824	35233330	+	CDS,three_prime_UTR
3	LOC_Os01g45200	cinnamoyl-CoA reductase-related, putative, expressed	gene	cinnamoyl-CoA reductase-related, putative, expressed	chr1	25639675	25646180	-	CDS,promoter
3	LOC_Os02g30410	expressed protein	gene	expressed protein	chr2	18104577	18108084	+	CDS,three_prime_UTR
3	LOC_Os02g55880	EF hand family protein, putative, expressed	gene	EF hand family protein, putative, expressed	chr2	34200999	34203985	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g61500	BAG domain containing protein, expressed	gene	BAG domain containing protein, expressed	chr1	35581220	35584684	+	CDS,three_prime_UTR
3	LOC_Os09g29980	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr9	18239803	18244316	-	three_prime_UTR,promoter
3	LOC_Os02g05880	RNA polymerase Rpb1, domain 2 family protein, expressed	gene	RNA polymerase Rpb1, domain 2 family protein, expressed	chr2	2904355	2919107	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g32400	STE_PAK_Ste20_MST_like.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	gene	STE_PAK_Ste20_MST_like.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	chr7	19257731	19267291	-	CDS
3	LOC_Os01g47256	exosome complex exonuclease RRP40, putative, expressed	gene	exosome complex exonuclease RRP40, putative, expressed	chr1	27003209	27006994	+	CDS
3	LOC_Os02g06260	phytosulfokine receptor precursor, putative, expressed	gene	phytosulfokine receptor precursor, putative, expressed	chr2	3126960	3129254	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g20180	expressed protein	gene	expressed protein	chr4	11237943	11245462	+	three_prime_UTR
3	LOC_Os01g04860	DUF647 domain containing protein, putative, expressed	gene	DUF647 domain containing protein, putative, expressed	chr1	2244732	2249576	+	three_prime_UTR,downstream
3	LOC_Os03g15540	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr3	8545882	8550623	-	CDS,three_prime_UTR
3	LOC_Os08g29669	cytochrome b5-like Heme/Steroid binding domain containing protein, expressed	gene	cytochrome b5-like Heme/Steroid binding domain containing protein, expressed	chr8	18217931	18221301	-	CDS,three_prime_UTR
3	LOC_Os04g52361	ribosomal protein S17, putative, expressed	gene	ribosomal protein S17, putative, expressed	chr4	30920881	30922819	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os12g09250	bZIP transcription factor domain containing protein, expressed	gene	bZIP transcription factor domain containing protein, expressed	chr12	4847832	4858742	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g07150	urease accessory protein F, putative, expressed	gene	urease accessory protein F, putative, expressed	chr2	3674670	3677975	+	CDS,three_prime_UTR,five_prime_UTR
3	LOC_Os11g34790	expressed protein	gene	expressed protein	chr11	19915760	19919485	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g02200	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr6	675127	677879	+	CDS,downstream
3	LOC_Os01g68750	adaptin, putative, expressed	gene	adaptin, putative, expressed	chr1	39930222	39937124	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g17880	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr6	10374847	10379264	+	CDS,promoter
3	LOC_Os02g54340	26S protease regulatory subunit 7, putative, expressed	gene	26S protease regulatory subunit 7, putative, expressed	chr2	33309334	33313392	-	CDS,three_prime_UTR,downstream
3	LOC_Os05g49060	uncharacterized protein ycf23, putative, expressed	gene	uncharacterized protein ycf23, putative, expressed	chr5	28065769	28068559	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g44160	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr6	26645327	26646899	-	three_prime_UTR
3	LOC_Os01g16910	outer mitochondrial membrane porin, putative, expressed	gene	outer mitochondrial membrane porin, putative, expressed	chr1	9669749	9674723	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g42420	expressed protein	gene	expressed protein	chr8	26782747	26788353	+	CDS,three_prime_UTR
3	LOC_Os11g32750	hydrolase, NUDIX family, domain containing protein, expressed	gene	hydrolase, NUDIX family, domain containing protein, expressed	chr11	18886527	18891119	+	three_prime_UTR
3	LOC_Os06g07480	CDK-activating kinase assembly factor MAT1 family protein, expressed	gene	CDK-activating kinase assembly factor MAT1 family protein, expressed	chr6	3595002	3597294	+	three_prime_UTR,downstream
3	LOC_Os04g21610	expressed protein	gene	expressed protein	chr4	12211521	12219480	-	CDS
3	LOC_Os02g18850	OsPOP5 - Putative Prolyl Oligopeptidase homologue, expressed	gene	OsPOP5 - Putative Prolyl Oligopeptidase homologue, expressed	chr2	10999886	11004647	-	CDS
3	LOC_Os08g39420	uncharacterized protein yeiN, putative, expressed	gene	uncharacterized protein yeiN, putative, expressed	chr8	24926820	24932081	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g23970	diphthine synthase, putative, expressed	gene	diphthine synthase, putative, expressed	chr3	13604192	13606803	-	CDS,three_prime_UTR,downstream
3	LOC_Os05g06290	expressed protein	gene	expressed protein	chr5	3214134	3216319	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g07920	NOI protein, nitrate-induced, putative, expressed	gene	NOI protein, nitrate-induced, putative, expressed	chr9	4041693	4044478	+	CDS,three_prime_UTR
3	LOC_Os01g56070	RING finger protein, putative, expressed	gene	RING finger protein, putative, expressed	chr1	32275506	32277182	-	three_prime_UTR,promoter
3	LOC_Os03g48610	galactosyltransferase family protein, putative, expressed	gene	galactosyltransferase family protein, putative, expressed	chr3	27708531	27713229	-	CDS
3	LOC_Os11g02450	elongation factor P, putative, expressed	gene	elongation factor P, putative, expressed	chr11	733248	736190	+	CDS,three_prime_UTR
3	LOC_Os02g34960	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr2	20960963	20963465	+	CDS,three_prime_UTR
3	LOC_Os02g56210	hydrolase, NUDIX family, domain containing protein, expressed	gene	hydrolase, NUDIX family, domain containing protein, expressed	chr2	34372762	34376238	-	three_prime_UTR
3	LOC_Os08g41790	phosphoribulokinase/Uridine kinase family protein, expressed	gene	phosphoribulokinase/Uridine kinase family protein, expressed	chr8	26387017	26392575	+	CDS,three_prime_UTR
3	LOC_Os01g63900	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr1	37075424	37078495	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g22600	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr1	12703674	12708782	-	CDS,three_prime_UTR
3	LOC_Os12g02820	cytidylyltransferase domain containing protein, expressed	gene	cytidylyltransferase domain containing protein, expressed	chr12	1004447	1010142	-	CDS,three_prime_UTR,downstream
3	LOC_Os04g06790	2-aminoethanethiol dioxygenase, putative, expressed	gene	2-aminoethanethiol dioxygenase, putative, expressed	chr4	3570902	3577236	-	CDS,three_prime_UTR,downstream
3	LOC_Os06g06420	glyoxalase/bleomycin resistance protein/dioxygenase, putative, expressed	gene	glyoxalase/bleomycin resistance protein/dioxygenase, putative, expressed	chr6	2994768	2996992	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g01820	cytochrome b5-like Heme/Steroid binding domain containing protein, expressed	gene	cytochrome b5-like Heme/Steroid binding domain containing protein, expressed	chr5	492255	494332	+	three_prime_UTR,downstream
3	LOC_Os08g06140	no apical meristem protein, putative, expressed	gene	no apical meristem protein, putative, expressed	chr8	3388020	3392453	-	CDS
3	LOC_Os01g39000	ZmGR2c, putative, expressed	gene	ZmGR2c, putative, expressed	chr1	21920964	21926901	-	CDS,promoter
3	LOC_Os05g49300	iron-sulfur cluster assembly enzyme ISCU, mitochondrial precursor, putative, expressed	gene	iron-sulfur cluster assembly enzyme ISCU, mitochondrial precursor, putative, expressed	chr5	28227184	28230627	+	CDS
3	LOC_Os07g07550	galactose-1-phosphate uridyl transferase, putative, expressed	gene	galactose-1-phosphate uridyl transferase, putative, expressed	chr7	3761247	3765454	-	CDS,promoter
3	LOC_Os04g51700	DNA ligase I, ATP-dependent family protein, expressed	gene	DNA ligase I, ATP-dependent family protein, expressed	chr4	30444521	30453675	-	CDS
3	LOC_Os09g37930	expressed protein	gene	expressed protein	chr9	21868379	21878106	-	CDS
3	LOC_Os02g07960	STRUBBELIG-RECEPTOR FAMILY 3 precursor, putative, expressed	gene	STRUBBELIG-RECEPTOR FAMILY 3 precursor, putative, expressed	chr2	4165204	4175342	-	CDS,three_prime_UTR
3	LOC_Os06g12510	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr6	6789517	6791070	-	CDS,promoter
3	LOC_Os07g27460	serine/threonine-protein kinase 19, putative, expressed	gene	serine/threonine-protein kinase 19, putative, expressed	chr7	15997512	16002374	+	CDS
3	LOC_Os11g11990	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr11	6651729	6659534	+	CDS,promoter
3	LOC_Os02g52160	LMBR1 integral membrane protein, putative, expressed	gene	LMBR1 integral membrane protein, putative, expressed	chr2	31917924	31925110	+	CDS,three_prime_UTR
3	LOC_Os07g05400	ferredoxin--NADP reductase, chloroplast precursor, putative, expressed	gene	ferredoxin--NADP reductase, chloroplast precursor, putative, expressed	chr7	2475836	2479203	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g03530	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr2	1433310	1436998	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g42350	nitrilase, putative, expressed	gene	nitrilase, putative, expressed	chr2	25459837	25463749	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g34070	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr9	20106553	20114088	-	three_prime_UTR
3	LOC_Os08g01794	bromodomain domain containing protein, expressed	gene	bromodomain domain containing protein, expressed	chr8	474402	481982	+	CDS,three_prime_UTR
3	LOC_Os03g25480	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr3	14551790	14554917	+	CDS,downstream
3	LOC_Os01g07370	KIP1, putative, expressed	gene	KIP1, putative, expressed	chr1	3478338	3483579	-	five_prime_UTR,CDS
3	LOC_Os03g26920	OsSCP12 - Putative Serine Carboxypeptidase homologue, expressed	gene	OsSCP12 - Putative Serine Carboxypeptidase homologue, expressed	chr3	15393974	15396350	+	CDS,promoter
3	LOC_Os11g02190	expressed protein	gene	expressed protein	chr11	608570	614689	+	CDS,three_prime_UTR
3	LOC_Os09g32540	expressed protein	gene	expressed protein	chr9	19424547	19430435	-	three_prime_UTR
3	LOC_Os11g03570	protein of unknown function, DUF618 domain containing protein, expressed	gene	protein of unknown function, DUF618 domain containing protein, expressed	chr11	1380786	1388516	-	CDS,three_prime_UTR
3	LOC_Os07g40310	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	24171151	24174417	-	CDS
3	LOC_Os02g15980	expressed protein	gene	expressed protein	chr2	9064468	9068427	+	CDS,downstream
3	LOC_Os02g32504	heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed	gene	heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed	chr2	19219506	19229764	-	CDS,promoter
3	LOC_Os01g40094	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr1	22616735	22623102	+	CDS,downstream
3	LOC_Os01g15310	LSM domain containing protein, expressed	gene	LSM domain containing protein, expressed	chr1	8569841	8573555	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g32350	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr7	19230655	19235051	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g29520	OsWAK81 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed	gene	OsWAK81 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed	chr9	17960168	17961784	-	five_prime_UTR,CDS,downstream
3	LOC_Os11g45250	ribonucleases P/MRP protein subunit POP1 containing protein, expressed	gene	ribonucleases P/MRP protein subunit POP1 containing protein, expressed	chr11	26911903	26916820	-	CDS
3	LOC_Os04g41300	ribosome recycling factor, putative, expressed	gene	ribosome recycling factor, putative, expressed	chr4	24320405	24323263	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g04270	transketolase, chloroplast precursor, putative, expressed	gene	transketolase, chloroplast precursor, putative, expressed	chr6	1807767	1811363	-	three_prime_UTR,promoter
3	LOC_Os01g67420	lipase, putative, expressed	gene	lipase, putative, expressed	chr1	39157110	39164686	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g63870	nucleobase-ascorbate transporter, putative, expressed	gene	nucleobase-ascorbate transporter, putative, expressed	chr1	37059557	37063572	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g34400	expressed protein	gene	expressed protein	chr10	18271563	18280586	+	CDS,three_prime_UTR
3	LOC_Os03g49490	expressed protein	gene	expressed protein	chr3	28157865	28160504	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g35850	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr9	20629236	20633047	+	CDS
3	LOC_Os10g33040	receptor-like protein kinase precursor, putative, expressed	gene	receptor-like protein kinase precursor, putative, expressed	chr10	17241034	17246695	+	CDS,three_prime_UTR
3	LOC_Os02g07044	rhodanese-like domain containing protein, putative, expressed	gene	rhodanese-like domain containing protein, putative, expressed	chr2	3610965	3614077	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g49270	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr5	28202236	28206848	+	CDS,three_prime_UTR
3	LOC_Os01g73550	mitochondrial-processing peptidase subunit alpha, mitochondrial precursor, putative, expressed	gene	mitochondrial-processing peptidase subunit alpha, mitochondrial precursor, putative, expressed	chr1	42613744	42617342	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g35930	OsFBL50 - F-box domain and LRR containing protein, expressed	gene	OsFBL50 - F-box domain and LRR containing protein, expressed	chr8	22653576	22656839	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g60530	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr3	34399963	34403616	+	CDS,three_prime_UTR
3	LOC_Os04g39090	SAM domain containing protein, putative, expressed	gene	SAM domain containing protein, putative, expressed	chr4	23043796	23049834	+	CDS,three_prime_UTR
3	LOC_Os02g48620	tetratricopeptide repeat, putative, expressed	gene	tetratricopeptide repeat, putative, expressed	chr2	29757747	29769183	-	CDS,three_prime_UTR
3	LOC_Os03g02480	inner membrane protein, putative, expressed	gene	inner membrane protein, putative, expressed	chr3	905154	908931	+	CDS
3	LOC_Os01g52790	cytochrome P450 72A1, putative, expressed	gene	cytochrome P450 72A1, putative, expressed	chr1	30371160	30375873	-	CDS
3	LOC_Os06g09390	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr6	4730331	4732912	+	three_prime_UTR
3	LOC_Os01g16354	rab GDP dissociation inhibitor alpha, putative, expressed	gene	rab GDP dissociation inhibitor alpha, putative, expressed	chr1	9272876	9278032	-	three_prime_UTR
3	LOC_Os05g01560	vacuolar ATP synthase, putative, expressed	gene	vacuolar ATP synthase, putative, expressed	chr5	326134	328162	-	CDS,three_prime_UTR
3	LOC_Os12g42370	GTPase of unknown function domain containing protein, putative, expressed	gene	GTPase of unknown function domain containing protein, putative, expressed	chr12	26300655	26304564	-	CDS,three_prime_UTR,downstream
3	LOC_Os11g19100	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr11	10881404	10887214	+	three_prime_UTR
3	LOC_Os12g02510	esterase, putative, expressed	gene	esterase, putative, expressed	chr12	855185	857043	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g02590	receptor-like kinase, putative, expressed	gene	receptor-like kinase, putative, expressed	chr1	861579	864253	-	CDS,three_prime_UTR,downstream
3	LOC_Os07g41820	stress responsive A/B Barrel domain containing protein, expressed	gene	stress responsive A/B Barrel domain containing protein, expressed	chr7	25048122	25050581	+	three_prime_UTR,promoter,downstream
3	LOC_Os02g46640	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr2	28458620	28461493	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g42040	MIF4G domain containing protein, putative, expressed	gene	MIF4G domain containing protein, putative, expressed	chr2	25267175	25278192	-	CDS
3	LOC_Os03g63410	elongation factor Tu, putative, expressed	gene	elongation factor Tu, putative, expressed	chr3	35819132	35823074	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g53670	expressed protein	gene	expressed protein	chr4	31797220	31807358	-	CDS
3	LOC_Os01g68524	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr1	39810679	39818512	-	three_prime_UTR
3	LOC_Os02g13350	hydrolase, NUDIX family, domain containing protein, expressed	gene	hydrolase, NUDIX family, domain containing protein, expressed	chr2	7123770	7126381	+	CDS,three_prime_UTR,promoter
3	LOC_Os10g35870	cytochrome b5-like Heme/Steroid binding domain containing protein, expressed	gene	cytochrome b5-like Heme/Steroid binding domain containing protein, expressed	chr10	19100297	19102611	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g49460	Rer1 protein, putative, expressed	gene	Rer1 protein, putative, expressed	chr6	29966954	29969516	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g40250	sex determination protein tasselseed-2, putative, expressed	gene	sex determination protein tasselseed-2, putative, expressed	chr7	24127287	24129565	+	three_prime_UTR,downstream
3	LOC_Os01g52110	RING finger and CHY zinc finger domain-containing protein 1, putative, expressed	gene	RING finger and CHY zinc finger domain-containing protein 1, putative, expressed	chr1	29964019	29969722	-	CDS,three_prime_UTR
3	LOC_Os04g30890	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr4	18285598	18287301	-	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os07g03110	OsFBX213 - F-box domain containing protein, expressed	gene	OsFBX213 - F-box domain containing protein, expressed	chr7	1182280	1184666	-	three_prime_UTR,promoter
3	LOC_Os12g40920	bZIP transcription factor domain containing protein, expressed	gene	bZIP transcription factor domain containing protein, expressed	chr12	25297048	25302949	+	CDS,three_prime_UTR
3	LOC_Os06g03650	hypothetical protein	gene	hypothetical protein	chr6	1420577	1420819	-	CDS,promoter
3	LOC_Os11g10250	expressed protein	gene	expressed protein	chr11	5558588	5564059	-	CDS
3	LOC_Os01g50032	expressed protein	gene	expressed protein	chr1	28739191	28743429	+	CDS
3	LOC_Os05g34790	GYF domain containing protein, putative	gene	GYF domain containing protein, putative	chr5	20582149	20586141	+	CDS,downstream
3	LOC_Os03g50450	inactive receptor kinase At2g26730 precursor, putative, expressed	gene	inactive receptor kinase At2g26730 precursor, putative, expressed	chr3	28788477	28792309	-	CDS,three_prime_UTR
3	LOC_Os08g38080	helix-loop-helix DNA-binding domain containing protein, expressed	gene	helix-loop-helix DNA-binding domain containing protein, expressed	chr8	24119146	24121192	+	CDS,downstream
3	LOC_Os12g41860	START domain containing protein, expressed	gene	START domain containing protein, expressed	chr12	25887033	25893747	-	CDS,three_prime_UTR
3	LOC_Os11g11390	ribosomal protein, putative, expressed	gene	ribosomal protein, putative, expressed	chr11	6317016	6319704	+	CDS,three_prime_UTR
3	LOC_Os02g40410	expressed protein	gene	expressed protein	chr2	24465674	24471508	-	CDS
3	LOC_Os01g40620	Uncharacterized ACR, COG1565 containing protein, putative, expressed	gene	Uncharacterized ACR, COG1565 containing protein, putative, expressed	chr1	22947120	22951143	+	CDS,three_prime_UTR
3	LOC_Os04g12600	receptor-like protein kinase, putative, expressed	gene	receptor-like protein kinase, putative, expressed	chr4	6972106	6974520	-	CDS
3	LOC_Os02g35170	uncharacterized oxidoreductase yoxD, putative, expressed	gene	uncharacterized oxidoreductase yoxD, putative, expressed	chr2	21116431	21119271	+	three_prime_UTR,CDS
3	LOC_Os01g25740	powdery mildew resistance protein PM3F, putative, expressed	gene	powdery mildew resistance protein PM3F, putative, expressed	chr1	14585981	14590728	-	CDS
3	LOC_Os02g47670	bg55, putative, expressed	gene	bg55, putative, expressed	chr2	29129182	29135763	-	CDS
3	LOC_Os01g07200	staphylococcal nuclease homologue, putative, expressed	gene	staphylococcal nuclease homologue, putative, expressed	chr1	3396337	3399518	+	CDS,three_prime_UTR
3	LOC_Os05g01020	transcriptional repressor, putative, expressed	gene	transcriptional repressor, putative, expressed	chr5	38746	47170	-	CDS,three_prime_UTR,five_prime_UTR,promoter
3	LOC_Os06g18830	AGC_PVPK_like_kin82y.13 - ACG kinases include homologs to PKA, PKG and PKC, expressed	gene	AGC_PVPK_like_kin82y.13 - ACG kinases include homologs to PKA, PKG and PKC, expressed	chr6	10689488	10693168	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g62390	growth regulator related protein, putative, expressed	gene	growth regulator related protein, putative, expressed	chr1	36104365	36106972	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g55060	3-oxoacyl-synthase III, chloroplast precursor, putative, expressed	gene	3-oxoacyl-synthase III, chloroplast precursor, putative, expressed	chr4	32556263	32561392	+	CDS,three_prime_UTR
3	LOC_Os06g45910	peptidyl-prolyl cis-trans isomerase-like 4, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase-like 4, putative, expressed	chr6	27791511	27797582	+	CDS,promoter
3	LOC_Os11g32480	TPR repeat region family protein, expressed	gene	TPR repeat region family protein, expressed	chr11	18706576	18708656	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g39380	SCD1, putative, expressed	gene	SCD1, putative, expressed	chr1	22162051	22179384	-	CDS,three_prime_UTR
3	LOC_Os07g15570	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr7	9021290	9024563	+	CDS,downstream
3	LOC_Os07g46990	copper/zinc superoxide dismutase, putative, expressed	gene	copper/zinc superoxide dismutase, putative, expressed	chr7	28074556	28076674	-	CDS
3	LOC_Os12g32630	OsFBX448 - F-box domain containing protein, expressed	gene	OsFBX448 - F-box domain containing protein, expressed	chr12	19656302	19659365	-	CDS,three_prime_UTR
3	LOC_Os11g04954	DNA repair protein Rad51, putative, expressed	gene	DNA repair protein Rad51, putative, expressed	chr11	2115965	2120269	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g01450	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr6	270908	274437	-	CDS,promoter,downstream
3	LOC_Os07g13770	UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed	gene	UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed	chr7	7899578	7901422	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g13660	alanyl-tRNA synthetase, putative, expressed	gene	alanyl-tRNA synthetase, putative, expressed	chr6	7573979	7580554	+	CDS
3	LOC_Os02g07760	aldehyde dehydrogenase, putative, expressed	gene	aldehyde dehydrogenase, putative, expressed	chr2	4044575	4052435	+	CDS,three_prime_UTR
3	LOC_Os02g58330	expressed protein	gene	expressed protein	chr2	35675760	35677907	+	three_prime_UTR,promoter,downstream
3	LOC_Os12g06020	mRNA-decapping enzyme, putative, expressed	gene	mRNA-decapping enzyme, putative, expressed	chr12	2779552	2782706	+	CDS,three_prime_UTR
3	LOC_Os03g63520	Der1-like family domain containing protein, expressed	gene	Der1-like family domain containing protein, expressed	chr3	35876387	35881087	-	CDS,three_prime_UTR
3	LOC_Os03g11260	RING zinc finger protein-like, putative, expressed	gene	RING zinc finger protein-like, putative, expressed	chr3	5797463	5800148	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g02190	expressed protein	gene	expressed protein	chr5	687860	690396	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os08g03360	ATBET9, putative, expressed	gene	ATBET9, putative, expressed	chr8	1566556	1572065	-	CDS,three_prime_UTR
3	LOC_Os01g61410	NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed	gene	NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed	chr1	35507824	35512069	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g32050	chaperone protein dnaJ 10, putative, expressed	gene	chaperone protein dnaJ 10, putative, expressed	chr9	19124979	19129523	-	CDS
3	LOC_Os08g16930	expressed protein	gene	expressed protein	chr8	10366172	10368368	+	three_prime_UTR,downstream
3	LOC_Os05g07980	DUF630/DUF632 domains containing protein, putative, expressed	gene	DUF630/DUF632 domains containing protein, putative, expressed	chr5	4317474	4321861	-	CDS,three_prime_UTR
3	LOC_Os05g08410	ATP10 protein, expressed	gene	ATP10 protein, expressed	chr5	4585176	4588976	-	CDS,three_prime_UTR,downstream
3	LOC_Os07g46350	OsSCP40 - Putative Serine Carboxypeptidase homologue, expressed	gene	OsSCP40 - Putative Serine Carboxypeptidase homologue, expressed	chr7	27637822	27642804	-	CDS,promoter
3	LOC_Os10g41510	calcineurin B, putative, expressed	gene	calcineurin B, putative, expressed	chr10	22227364	22237161	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g61390	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr1	35500807	35504009	-	three_prime_UTR,promoter,downstream
3	LOC_Os10g41440	KH domain containing protein, putative, expressed	gene	KH domain containing protein, putative, expressed	chr10	22202973	22206492	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g33479	expressed protein	gene	expressed protein	chr8	20881210	20883530	+	five_prime_UTR,CDS
3	LOC_Os06g51170	serine/threonine-protein kinase Cx32, chloroplast precursor, putative, expressed	gene	serine/threonine-protein kinase Cx32, chloroplast precursor, putative, expressed	chr6	30952030	30955666	-	CDS,three_prime_UTR
3	LOC_Os10g35940	folylpolyglutamate synthetase, putative, expressed	gene	folylpolyglutamate synthetase, putative, expressed	chr10	19130077	19135339	-	three_prime_UTR,promoter
3	LOC_Os05g43650	expressed protein	gene	expressed protein	chr5	25319743	25323054	+	CDS,three_prime_UTR
3	LOC_Os01g23600	expressed protein	gene	expressed protein	chr1	13263904	13265643	+	three_prime_UTR,downstream
3	LOC_Os09g17600	membrane protein, putative, expressed	gene	membrane protein, putative, expressed	chr9	10762249	10767267	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g74600	vegetative storage protein, putative, expressed	gene	vegetative storage protein, putative, expressed	chr1	43195076	43197624	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g40040	expressed protein	gene	expressed protein	chr5	23452445	23457621	+	CDS,three_prime_UTR
3	LOC_Os01g40840	serine/threonine-protein kinase AFC3, putative, expressed	gene	serine/threonine-protein kinase AFC3, putative, expressed	chr1	23089710	23094339	+	CDS,three_prime_UTR
3	LOC_Os01g70300	aspartokinase 3, chloroplast precursor, putative, expressed	gene	aspartokinase 3, chloroplast precursor, putative, expressed	chr1	40707597	40711917	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g25189	delta14-sterol reductase, putative, expressed	gene	delta14-sterol reductase, putative, expressed	chr1	14223870	14232630	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os11g29370	haloacid dehalogenase-like hydrolase family protein, putative, expressed	gene	haloacid dehalogenase-like hydrolase family protein, putative, expressed	chr11	16570743	16578021	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g18110	 proteins of unknown function domain containing protein, putative, expressed	gene	 proteins of unknown function domain containing protein, putative, expressed	chr3	10104917	10106962	+	three_prime_UTR,downstream
3	LOC_Os05g07300	serine/threonine-protein kinase receptor precursor, putative, expressed	gene	serine/threonine-protein kinase receptor precursor, putative, expressed	chr5	3878175	3881774	-	CDS
3	LOC_Os04g52920	remorin family protein, putative, expressed	gene	remorin family protein, putative, expressed	chr4	31339513	31342760	+	CDS
3	LOC_Os01g23610	dihydrolipoyl dehydrogenase, putative, expressed	gene	dihydrolipoyl dehydrogenase, putative, expressed	chr1	13271588	13281175	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g36860	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	22076197	22078186	-	CDS
3	LOC_Os06g50300	heat shock protein, putative, expressed	gene	heat shock protein, putative, expressed	chr6	30443413	30449499	-	CDS
3	LOC_Os06g23540	conserved hypothetical protein	gene	conserved hypothetical protein	chr6	13737448	13738457	+	CDS,downstream
3	LOC_Os01g38530	ELF3 protein, putative, expressed	gene	ELF3 protein, putative, expressed	chr1	21635986	21642066	-	CDS,three_prime_UTR
3	LOC_Os06g02430	expressed protein	gene	expressed protein	chr6	834597	838194	+	CDS,three_prime_UTR
3	LOC_Os03g43420	single-stranded DNA-binding protein, putative, expressed	gene	single-stranded DNA-binding protein, putative, expressed	chr3	24213300	24217527	-	CDS,three_prime_UTR
3	LOC_Os07g30774	calmodulin-binding transcription activator 5, putative, expressed	gene	calmodulin-binding transcription activator 5, putative, expressed	chr7	18204283	18217197	-	CDS,three_prime_UTR
3	LOC_Os03g52120	DNA binding protein, putative, expressed	gene	DNA binding protein, putative, expressed	chr3	29920604	29923927	+	CDS,downstream
3	LOC_Os03g44430	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	gene	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	chr3	24999671	25001565	-	three_prime_UTR,promoter
3	LOC_Os06g40450	targeting protein for Xklp2, putative, expressed	gene	targeting protein for Xklp2, putative, expressed	chr6	24090285	24095121	-	CDS
3	LOC_Os04g59130	OsFBT6 - F-box and tubby domain containing protein, expressed	gene	OsFBT6 - F-box and tubby domain containing protein, expressed	chr4	34991027	34994680	+	CDS
3	LOC_Os06g05630	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr6	2545689	2548258	+	CDS,three_prime_UTR,five_prime_UTR,downstream
3	LOC_Os10g13700	phosphoenolpyruvate carboxykinase, putative, expressed	gene	phosphoenolpyruvate carboxykinase, putative, expressed	chr10	7453958	7459731	-	CDS,three_prime_UTR
3	LOC_Os05g25350	TKL_IRAK_CrRLK1L-1.12 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed	gene	TKL_IRAK_CrRLK1L-1.12 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed	chr5	14659149	14664254	+	five_prime_UTR,CDS,promoter
3	LOC_Os05g01480	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr5	284970	287694	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g30280	Os5bglu20 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed	gene	Os5bglu20 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed	chr5	17486988	17492062	+	CDS,five_prime_UTR
3	LOC_Os06g10520	pantothenate kinase, putative, expressed	gene	pantothenate kinase, putative, expressed	chr6	5419909	5426255	+	CDS,three_prime_UTR
3	LOC_Os04g45580	kinesin motor domain containing protein, expressed	gene	kinesin motor domain containing protein, expressed	chr4	26776506	26782954	-	CDS,three_prime_UTR
3	LOC_Os01g17430	coatomer subunit beta-1, putative, expressed	gene	coatomer subunit beta-1, putative, expressed	chr1	10020404	10026098	-	CDS,three_prime_UTR
3	LOC_Os02g07160	glyoxalase family protein, putative, expressed	gene	glyoxalase family protein, putative, expressed	chr2	3677193	3679952	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g55260	thiamine-repressible mitochondrial transport protein THI74, putative, expressed	gene	thiamine-repressible mitochondrial transport protein THI74, putative, expressed	chr4	32670537	32675530	-	CDS
3	LOC_Os03g49800	phosphatidylinositol-4-phosphate 5-kinase, putative, expressed	gene	phosphatidylinositol-4-phosphate 5-kinase, putative, expressed	chr3	28351148	28355664	-	CDS,three_prime_UTR
3	LOC_Os06g49500	integral membrane protein, putative, expressed	gene	integral membrane protein, putative, expressed	chr6	29977814	29980993	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g27690	expressed protein	gene	expressed protein	chr9	16851179	16853763	+	three_prime_UTR,downstream
3	LOC_Os04g01250	amidase family protein, putative, expressed	gene	amidase family protein, putative, expressed	chr4	186743	196110	-	CDS
3	LOC_Os08g35880	OsFBX294 - F-box domain containing protein, expressed	gene	OsFBX294 - F-box domain containing protein, expressed	chr8	22631551	22635687	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g38440	GRAM and C2 domains containing protein, putative, expressed	gene	GRAM and C2 domains containing protein, putative, expressed	chr8	24323316	24329721	+	CDS
3	LOC_Os02g39970	regulatory subunit, putative, expressed	gene	regulatory subunit, putative, expressed	chr2	24160960	24168376	-	CDS,three_prime_UTR
3	LOC_Os03g07150	OsPP2Ac-5 - Phosphatase 2A isoform 5 belonging to family 2, expressed	gene	OsPP2Ac-5 - Phosphatase 2A isoform 5 belonging to family 2, expressed	chr3	3655695	3660856	-	CDS,three_prime_UTR
3	LOC_Os10g23180	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr10	12019069	12027456	-	CDS,three_prime_UTR
3	LOC_Os02g18450	GTP-binding protein typA/bipA, putative, expressed	gene	GTP-binding protein typA/bipA, putative, expressed	chr2	10739449	10747500	+	CDS,three_prime_UTR
3	LOC_Os07g19070	prefoldin, putative, expressed	gene	prefoldin, putative, expressed	chr7	11286877	11291055	-	three_prime_UTR,CDS
3	LOC_Os12g31810	cyclin, putative, expressed	gene	cyclin, putative, expressed	chr12	19109816	19114981	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g05500	OsFBX159 - F-box domain containing protein, expressed	gene	OsFBX159 - F-box domain containing protein, expressed	chr5	2736899	2738699	-	three_prime_UTR,promoter
3	LOC_Os03g44560	expp1 protein precursor, putative, expressed	gene	expp1 protein precursor, putative, expressed	chr3	25091033	25094971	-	three_prime_UTR
3	LOC_Os04g12520	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr4	6912178	6918962	+	CDS,promoter
3	LOC_Os03g20410	aquaporin SIP2-1, putative, expressed	gene	aquaporin SIP2-1, putative, expressed	chr3	11545165	11547802	-	CDS,three_prime_UTR,downstream
3	LOC_Os04g58560	cysteine protease ATG4, putative, expressed	gene	cysteine protease ATG4, putative, expressed	chr4	34631535	34634977	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g43480	AAA-type ATPase family protein, putative, expressed	gene	AAA-type ATPase family protein, putative, expressed	chr1	24893494	24898982	+	CDS
3	LOC_Os01g05130	expressed protein	gene	expressed protein	chr1	2402270	2404982	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g33644	inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed	gene	inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed	chr5	19732284	19743121	-	CDS
3	LOC_Os05g45960	aldehyde dehydrogenase, putative, expressed	gene	aldehyde dehydrogenase, putative, expressed	chr5	26572097	26578219	-	CDS,three_prime_UTR
3	LOC_Os10g42320	nonsense-mediated mRNA decay protein 3, putative, expressed	gene	nonsense-mediated mRNA decay protein 3, putative, expressed	chr10	22710402	22712899	-	three_prime_UTR,promoter
3	LOC_Os02g01750	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	419393	420208	-	CDS,promoter
3	LOC_Os02g50360	nicalin, putative, expressed	gene	nicalin, putative, expressed	chr2	30744695	30750667	-	CDS,three_prime_UTR
3	LOC_Os06g49060	ternary complex factor MIP1, putative, expressed	gene	ternary complex factor MIP1, putative, expressed	chr6	29732807	29736194	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g09940	GTP-binding protein, putative, expressed	gene	GTP-binding protein, putative, expressed	chr8	5745740	5751489	+	CDS,three_prime_UTR
3	LOC_Os01g28690	nucleoporin autopeptidase domain containing protein, expressed	gene	nucleoporin autopeptidase domain containing protein, expressed	chr1	16060921	16066636	+	CDS
3	LOC_Os02g30800	POLE1 - Putative DNA polymerase epsilon catalytic subunit, expressed	gene	POLE1 - Putative DNA polymerase epsilon catalytic subunit, expressed	chr2	18343019	18365090	+	CDS
3	LOC_Os12g34370	adaptor complexes medium subunit family protein, expressed	gene	adaptor complexes medium subunit family protein, expressed	chr12	20799423	20804483	+	CDS,three_prime_UTR
3	LOC_Os10g39570	conserved hypothetical protein	gene	conserved hypothetical protein	chr10	21082691	21084663	+	CDS
3	LOC_Os10g37880	oxidoreductase, putative, expressed	gene	oxidoreductase, putative, expressed	chr10	20209911	20213498	+	CDS,three_prime_UTR
3	LOC_Os04g57700	expressed protein	gene	expressed protein	chr4	34161446	34167220	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g05510	expressed protein	gene	expressed protein	chr1	2612656	2622196	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g34330	BAH domain containing protein, expressed	gene	BAH domain containing protein, expressed	chr1	18922561	18938234	+	three_prime_UTR,CDS,downstream
3	LOC_Os02g28465	expressed protein	gene	expressed protein	chr2	16825750	16828428	+	three_prime_UTR
3	LOC_Os10g08570	RNA recognition motif family protein, expressed	gene	RNA recognition motif family protein, expressed	chr10	4672193	4678756	+	CDS,downstream
3	LOC_Os11g36200	receptor-like protein kinase 2 precursor, putative, expressed	gene	receptor-like protein kinase 2 precursor, putative, expressed	chr11	20831684	20835610	+	three_prime_UTR
3	LOC_Os02g55180	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	gene	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	chr2	33791497	33797995	+	CDS,three_prime_UTR
3	LOC_Os06g04560	kinesin motor domain containing protein, expressed	gene	kinesin motor domain containing protein, expressed	chr6	1972530	1982164	-	CDS,three_prime_UTR
3	LOC_Os04g35840	T-complex protein 11, putative, expressed	gene	T-complex protein 11, putative, expressed	chr4	21670336	21676186	+	CDS
3	LOC_Os03g07160	OsFBK11 - F-box domain and kelch repeat containing protein, expressed	gene	OsFBK11 - F-box domain and kelch repeat containing protein, expressed	chr3	3663636	3668938	+	CDS,three_prime_UTR
3	LOC_Os03g09970	sulfate transporter, putative, expressed	gene	sulfate transporter, putative, expressed	chr3	4983579	4991413	+	CDS,five_prime_UTR
3	LOC_Os08g33120	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr8	20575999	20580783	-	CDS,three_prime_UTR
3	LOC_Os03g13830	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr3	7494988	7498300	-	CDS,promoter,downstream
3	LOC_Os02g05820	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr2	2869668	2874216	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g54940	dehydrogenase, putative, expressed	gene	dehydrogenase, putative, expressed	chr1	31598113	31603550	+	CDS,downstream
3	LOC_Os09g33570	AGAP009680-PA, putative, expressed	gene	AGAP009680-PA, putative, expressed	chr9	19798895	19802112	+	CDS,promoter
3	LOC_Os11g16370	uridine/cytidine kinase-like 1, putative, expressed	gene	uridine/cytidine kinase-like 1, putative, expressed	chr11	9028829	9037244	+	CDS
3	LOC_Os06g17390	auxin-independent growth promoter protein, putative, expressed	gene	auxin-independent growth promoter protein, putative, expressed	chr6	10081203	10086095	-	CDS,three_prime_UTR
3	LOC_Os10g04690	hypothetical protein	gene	hypothetical protein	chr10	2238195	2239820	-	CDS,downstream
3	LOC_Os08g27240	ARID/BRIGHT DNA-binding domain containing protein	gene	ARID/BRIGHT DNA-binding domain containing protein	chr8	16625237	16630550	+	CDS
3	LOC_Os03g62080	mRNA-decapping enzyme, putative, expressed	gene	mRNA-decapping enzyme, putative, expressed	chr3	35160988	35166948	-	five_prime_UTR,CDS
3	LOC_Os04g33400	OsFBLD2 - F-box, LRR and FBD domain containing protein, expressed	gene	OsFBLD2 - F-box, LRR and FBD domain containing protein, expressed	chr4	20064262	20066172	-	three_prime_UTR,promoter
3	LOC_Os02g19924	aminotransferase, classes I and II, domain containing protein, expressed	gene	aminotransferase, classes I and II, domain containing protein, expressed	chr2	11716851	11736542	+	CDS
3	LOC_Os05g06750	dihydrolipoyl dehydrogenase, mitochondrial precursor, putative, expressed	gene	dihydrolipoyl dehydrogenase, mitochondrial precursor, putative, expressed	chr5	3526694	3530402	+	CDS,three_prime_UTR
3	LOC_Os01g63940	Transcription initiation factor TFIID subunit A containing protein, expressed	gene	Transcription initiation factor TFIID subunit A containing protein, expressed	chr1	37117421	37120331	-	CDS,three_prime_UTR
3	LOC_Os09g36270	pantothenate kinase, putative, expressed	gene	pantothenate kinase, putative, expressed	chr9	20927921	20937915	+	three_prime_UTR,CDS
3	LOC_Os07g01850	NLI interacting factor-like phosphatase, putative, expressed	gene	NLI interacting factor-like phosphatase, putative, expressed	chr7	505291	510283	+	CDS
3	LOC_Os08g09320	YL1 nuclear protein C-terminal domain containing protein, expressed	gene	YL1 nuclear protein C-terminal domain containing protein, expressed	chr8	5399913	5403346	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g09150	inorganic H+ pyrophosphatase, putative, expressed	gene	inorganic H+ pyrophosphatase, putative, expressed	chr2	4693807	4699297	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g14770	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr1	8250639	8262539	-	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os12g07270	bile acid sodium symporter family protein, putative, expressed	gene	bile acid sodium symporter family protein, putative, expressed	chr12	3572432	3575996	-	CDS,three_prime_UTR
3	LOC_Os11g02760	histidine triad family protein, putative	gene	histidine triad family protein, putative	chr11	904663	906832	+	CDS
3	LOC_Os02g56200	 ELMO/CED-12 family protein, putative, expressed	gene	 ELMO/CED-12 family protein, putative, expressed	chr2	34366517	34372513	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g47420	pterin-4-alpha-carbinolamine dehydratase, putative, expressed	gene	pterin-4-alpha-carbinolamine dehydratase, putative, expressed	chr1	27094414	27099270	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g36770	serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed	gene	serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed	chr6	21653900	21661474	+	CDS,three_prime_UTR
3	LOC_Os02g52430	regulator of ribonuclease, putative, expressed	gene	regulator of ribonuclease, putative, expressed	chr2	32082213	32084435	-	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os12g09120	mRNA-capping enzyme, putative, expressed	gene	mRNA-capping enzyme, putative, expressed	chr12	4762170	4774448	-	CDS,three_prime_UTR
3	LOC_Os05g03550	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr5	1501022	1507823	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g45410	conserved hypothetical protein	gene	conserved hypothetical protein	chr11	27020866	27026089	-	CDS,promoter
3	LOC_Os03g07430	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr3	3766422	3770553	-	CDS,promoter
3	LOC_Os08g29500	histone-like transcription factor and archaeal histone, putative, expressed	gene	histone-like transcription factor and archaeal histone, putative, expressed	chr8	18084851	18089294	+	CDS,three_prime_UTR
3	LOC_Os06g31190	intracellular protein transport protein USO1-related, putative, expressed	gene	intracellular protein transport protein USO1-related, putative, expressed	chr6	18115313	18120226	-	CDS,three_prime_UTR
3	LOC_Os02g47860	uridine kinase, putative, expressed	gene	uridine kinase, putative, expressed	chr2	29271738	29278052	+	CDS,three_prime_UTR
3	LOC_Os02g03370	hypothetical protein	gene	hypothetical protein	chr2	1366149	1369039	+	CDS
3	LOC_Os06g42100	hypothetical protein	gene	hypothetical protein	chr6	25288296	25289486	-	CDS,downstream
3	LOC_Os05g48340	proteasome-related, putative, expressed	gene	proteasome-related, putative, expressed	chr5	27649707	27655256	+	CDS,three_prime_UTR
3	LOC_Os11g19700	cycloeucalenol cycloisomerase, putative, expressed	gene	cycloeucalenol cycloisomerase, putative, expressed	chr11	11336541	11342887	+	CDS
3	LOC_Os04g31740	hypothetical protein	gene	hypothetical protein	chr4	18829393	18830083	+	CDS,promoter,downstream
3	LOC_Os10g28320	oxidoreductase, aldo/keto reductase family protein, putative, expressed	gene	oxidoreductase, aldo/keto reductase family protein, putative, expressed	chr10	14660276	14665378	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g37610	B3 DNA binding domain containing protein, putative, expressed	gene	B3 DNA binding domain containing protein, putative, expressed	chr7	22533907	22541790	+	CDS
3	LOC_Os01g73514	5-oxoprolinase, putative, expressed	gene	5-oxoprolinase, putative, expressed	chr1	42589837	42596958	-	three_prime_UTR
3	LOC_Os06g38670	receptor-like protein kinase precursor, putative	gene	receptor-like protein kinase precursor, putative	chr6	22957564	22965353	+	CDS,downstream
3	LOC_Os03g01770	rhodanese, putative, expressed	gene	rhodanese, putative, expressed	chr3	481917	483761	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g25820	myb-like DNA-binding domain containing protein, expressed	gene	myb-like DNA-binding domain containing protein, expressed	chr8	15708067	15713812	+	CDS,three_prime_UTR
3	LOC_Os04g59590	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr4	35249828	35254021	+	CDS,three_prime_UTR
3	LOC_Os03g58960	DHHC zinc finger domain containing protein, expressed	gene	DHHC zinc finger domain containing protein, expressed	chr3	33563383	33569015	-	CDS,three_prime_UTR
3	LOC_Os02g18370	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr2	10692548	10696752	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g28030	OsPOP22 - Putative Prolyl Oligopeptidase homologue, expressed	gene	OsPOP22 - Putative Prolyl Oligopeptidase homologue, expressed	chr10	14472282	14477777	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os09g38550	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr9	22173251	22177880	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g04934	GIY-YIG catalytic domain containing protein, putative, expressed	gene	GIY-YIG catalytic domain containing protein, putative, expressed	chr12	2123538	2125725	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g35920	nonsense-mediated decay UPF3, putative, expressed	gene	nonsense-mediated decay UPF3, putative, expressed	chr4	21725135	21732811	-	CDS,three_prime_UTR
3	LOC_Os03g13840	senescence-associated protein, putative, expressed	gene	senescence-associated protein, putative, expressed	chr3	7499072	7502908	-	CDS
3	LOC_Os11g34180	uncharacterized protein family UPF0016 domain containing protein, expressed	gene	uncharacterized protein family UPF0016 domain containing protein, expressed	chr11	19542473	19547278	-	CDS
3	LOC_Os12g34880	expressed protein	gene	expressed protein	chr12	21204778	21206279	-	three_prime_UTR,downstream
3	LOC_Os06g11500	MCM9 - Putative minichromosome maintenance MCM family subunit 9, expressed	gene	MCM9 - Putative minichromosome maintenance MCM family subunit 9, expressed	chr6	6085290	6096663	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g25330	SAC9, putative, expressed	gene	SAC9, putative, expressed	chr1	14307133	14315670	+	CDS,three_prime_UTR
3	LOC_Os04g55150	UBA/TS-N domain containing protein, expressed	gene	UBA/TS-N domain containing protein, expressed	chr4	32603602	32609055	+	CDS
3	LOC_Os08g06430	mitochondrial NADH-ubiquinone oxidoreductase, putative, expressed	gene	mitochondrial NADH-ubiquinone oxidoreductase, putative, expressed	chr8	3612353	3614881	+	CDS,three_prime_UTR
3	LOC_Os02g57750	protein binding protein, putative, expressed	gene	protein binding protein, putative, expressed	chr2	35356955	35363032	+	CDS,three_prime_UTR
3	LOC_Os04g14340	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr4	8028578	8033247	-	CDS
3	LOC_Os06g36800	O-acyltransferase, putative, expressed	gene	O-acyltransferase, putative, expressed	chr6	21676546	21683447	+	CDS,three_prime_UTR
3	LOC_Os01g64890	CorA-like magnesium transporter protein, putative, expressed	gene	CorA-like magnesium transporter protein, putative, expressed	chr1	37663074	37666306	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g10790	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr1	5759481	5763641	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g38990	DNA-binding protein, putative, expressed	gene	DNA-binding protein, putative, expressed	chr3	21672220	21678887	+	CDS,three_prime_UTR
3	LOC_Os01g49529	OsWAK10d - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed	gene	OsWAK10d - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed	chr1	28480966	28495222	-	three_prime_UTR,promoter
3	LOC_Os08g07774	disease resistance protein RPM1, putative, expressed	gene	disease resistance protein RPM1, putative, expressed	chr8	4351810	4360461	+	CDS,three_prime_UTR
3	LOC_Os02g07260	phosphoglycerate kinase protein, putative, expressed	gene	phosphoglycerate kinase protein, putative, expressed	chr2	3727491	3731346	+	CDS,three_prime_UTR
3	LOC_Os08g01300	zinc finger DHHC domain-containing protein, putative, expressed	gene	zinc finger DHHC domain-containing protein, putative, expressed	chr8	190246	193505	-	CDS,promoter,downstream
3	LOC_Os06g16390	SET domain containing protein, expressed	gene	SET domain containing protein, expressed	chr6	9352714	9361102	+	CDS,three_prime_UTR
3	LOC_Os05g44590	ATP-dependent protease La, putative, expressed	gene	ATP-dependent protease La, putative, expressed	chr5	25879852	25885341	+	CDS,three_prime_UTR
3	LOC_Os08g27580	expressed protein	gene	expressed protein	chr8	16808985	16812200	+	three_prime_UTR
3	LOC_Os01g32350	OsClp2 - Putative Clp protease homologue, expressed	gene	OsClp2 - Putative Clp protease homologue, expressed	chr1	17745317	17751044	+	CDS,three_prime_UTR,promoter
3	LOC_Os06g43140	GA16396-PA, putative, expressed	gene	GA16396-PA, putative, expressed	chr6	25931432	25934035	+	CDS,three_prime_UTR
3	LOC_Os01g74180	adaptin, putative, expressed	gene	adaptin, putative, expressed	chr1	42969296	42975874	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g04950	protein binding protein, putative, expressed	gene	protein binding protein, putative, expressed	chr5	2382155	2387164	-	CDS
3	LOC_Os01g64770	polypyrimidine tract-binding protein, putative, expressed	gene	polypyrimidine tract-binding protein, putative, expressed	chr1	37579409	37584185	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g43420	PTAC5, putative, expressed	gene	PTAC5, putative, expressed	chr4	25515723	25518449	+	three_prime_UTR,downstream
3	LOC_Os07g45370	expressed protein	gene	expressed protein	chr7	27057614	27061290	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g50830	expressed protein	gene	expressed protein	chr2	31048983	31053412	-	CDS,three_prime_UTR
3	LOC_Os01g02100	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr1	597290	600472	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g22400	ulp1 protease family protein, putative, expressed	gene	ulp1 protease family protein, putative, expressed	chr3	12822303	12826996	-	three_prime_UTR,CDS
3	LOC_Os02g51750	annexin, putative, expressed	gene	annexin, putative, expressed	chr2	31692292	31694634	-	CDS
3	LOC_Os11g10780	expressed protein	gene	expressed protein	chr11	5917357	5919530	-	CDS,three_prime_UTR
3	LOC_Os12g42520	receptor kinase, putative	gene	receptor kinase, putative	chr12	26382328	26385998	+	CDS,downstream
3	LOC_Os06g13580	expressed protein	gene	expressed protein	chr6	7497332	7499518	-	CDS,promoter
3	LOC_Os05g48050	ribosomal protein L7/L12 C-terminal domain containing protein, expressed	gene	ribosomal protein L7/L12 C-terminal domain containing protein, expressed	chr5	27484339	27486142	-	three_prime_UTR,promoter
3	LOC_Os09g34130	GRAM domain containing protein, expressed	gene	GRAM domain containing protein, expressed	chr9	20146379	20153779	-	CDS
3	LOC_Os11g05300	RING-H2 finger protein, putative, expressed	gene	RING-H2 finger protein, putative, expressed	chr11	2341370	2344099	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g04930	ASH-like SPRY domain containing protein, putative, expressed	gene	ASH-like SPRY domain containing protein, putative, expressed	chr12	2119916	2123400	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g45310	OsSPL11 - SBP-box gene family member, expressed	gene	OsSPL11 - SBP-box gene family member, expressed	chr6	27386540	27390269	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g67360	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr1	39101233	39104721	-	CDS,three_prime_UTR
3	LOC_Os02g56850	glutathione reductase, putative, expressed	gene	glutathione reductase, putative, expressed	chr2	34831870	34838075	+	CDS,three_prime_UTR
3	LOC_Os02g43350	OsFtsH7  FtsH protease, homologue of AtFtsH7, expressed	gene	OsFtsH7  FtsH protease, homologue of AtFtsH7, expressed	chr2	26150407	26156594	+	CDS
3	LOC_Os10g21660	FAD binding protein, putative, expressed	gene	FAD binding protein, putative, expressed	chr10	11016835	11026848	-	three_prime_UTR
3	LOC_Os04g41530	serine/threonine-protein kinase GCN2, putative	gene	serine/threonine-protein kinase GCN2, putative	chr4	24446092	24450702	+	CDS
3	LOC_Os03g06190	3-5 exonuclease family protein, putative, expressed	gene	3-5 exonuclease family protein, putative, expressed	chr3	3102830	3108799	+	CDS,three_prime_UTR
3	LOC_Os01g19870	hydrolase, acting on carbon-nitrogen, putative, expressed	gene	hydrolase, acting on carbon-nitrogen, putative, expressed	chr1	11271131	11277190	+	CDS
3	LOC_Os05g13440	coiled-coil domain-containing protein 25, putative, expressed	gene	coiled-coil domain-containing protein 25, putative, expressed	chr5	7455409	7460852	-	CDS,three_prime_UTR
3	LOC_Os12g19549	telomerase reverse transcriptase, putative, expressed	gene	telomerase reverse transcriptase, putative, expressed	chr12	11359932	11376092	-	CDS,three_prime_UTR
3	LOC_Os11g19800	Ras family domain containing protein, expressed	gene	Ras family domain containing protein, expressed	chr11	11402808	11405611	+	three_prime_UTR,downstream
3	LOC_Os03g45260	vesicle transport v-SNARE protein, putative, expressed	gene	vesicle transport v-SNARE protein, putative, expressed	chr3	25550424	25554504	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g11990	expressed protein	gene	expressed protein	chr6	6400420	6406786	-	CDS,three_prime_UTR
3	LOC_Os02g35950	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr2	21590776	21596651	+	CDS,three_prime_UTR
3	LOC_Os10g39900	glycosyltransferase family protein 1, putative, expressed	gene	glycosyltransferase family protein 1, putative, expressed	chr10	21269377	21276558	+	CDS,three_prime_UTR
3	LOC_Os12g21710	nnrU, putative, expressed	gene	nnrU, putative, expressed	chr12	12201766	12205396	+	CDS,three_prime_UTR,promoter
3	LOC_Os07g42500	FYVE zinc finger domain containing protein, expressed	gene	FYVE zinc finger domain containing protein, expressed	chr7	25434737	25438807	+	CDS,promoter
3	LOC_Os07g08400	GTP binding protein, putative, expressed	gene	GTP binding protein, putative, expressed	chr7	4311795	4318185	+	three_prime_UTR
3	LOC_Os05g31570	disease resistance protein RGA4, putative, expressed	gene	disease resistance protein RGA4, putative, expressed	chr5	18316583	18322300	+	CDS,three_prime_UTR
3	LOC_Os07g40510	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr7	24265482	24272376	-	CDS,three_prime_UTR
3	LOC_Os07g48950	aldehyde dehydrogenase 22A1 precursor, putative	gene	aldehyde dehydrogenase 22A1 precursor, putative	chr7	29288236	29290623	-	CDS,downstream
3	LOC_Os01g39830	beta-galactosidase, putative, expressed	gene	beta-galactosidase, putative, expressed	chr1	22465501	22471544	+	CDS,three_prime_UTR
3	LOC_Os09g35720	generative cell specific-1, putative	gene	generative cell specific-1, putative	chr9	20541270	20547711	-	CDS,downstream
3	LOC_Os02g02524	canopy homolog 2 precursor, putative, expressed	gene	canopy homolog 2 precursor, putative, expressed	chr2	900945	906395	+	CDS,promoter
3	LOC_Os08g17060	expressed protein	gene	expressed protein	chr8	10443353	10445897	-	CDS,three_prime_UTR
3	LOC_Os09g29190	phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplast precursor, putative, expressed	gene	phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplast precursor, putative, expressed	chr9	17741545	17745504	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g08884	expressed protein	gene	expressed protein	chr6	4467202	4469900	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os08g37780	NOL1/NOP2/sun family protein, putative, expressed	gene	NOL1/NOP2/sun family protein, putative, expressed	chr8	23924194	23931607	-	CDS,three_prime_UTR,downstream
3	LOC_Os06g49920	expressed protein	gene	expressed protein	chr6	30220420	30222864	+	three_prime_UTR,downstream
3	LOC_Os08g19650	homeobox protein knotted-1, putative, expressed	gene	homeobox protein knotted-1, putative, expressed	chr8	11757706	11764271	+	CDS
3	LOC_Os01g04030	signal peptidase complex subunit 3, putative, expressed	gene	signal peptidase complex subunit 3, putative, expressed	chr1	1753332	1756728	+	CDS
3	LOC_Os02g50570	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr2	30876004	30880725	-	CDS,promoter
3	LOC_Os11g02670	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr11	855475	859983	+	three_prime_UTR,promoter,downstream
3	LOC_Os09g04504	expressed protein	gene	expressed protein	chr9	2395780	2399181	-	three_prime_UTR
3	LOC_Os03g07380	expressed protein	gene	expressed protein	chr3	3746929	3749569	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g57690	expressed protein	gene	expressed protein	chr4	34157440	34160556	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g42840	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr4	25164605	25175954	-	CDS,three_prime_UTR
3	LOC_Os11g47820	glucan endo-1,3-beta-glucosidase precursor, putative, expressed	gene	glucan endo-1,3-beta-glucosidase precursor, putative, expressed	chr11	28315452	28319588	-	CDS
3	LOC_Os01g13260	cyclin-A1, putative, expressed	gene	cyclin-A1, putative, expressed	chr1	7388342	7392708	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g12530	ABC1 family domain containing protein, putative, expressed	gene	ABC1 family domain containing protein, putative, expressed	chr7	7151819	7157023	-	CDS
3	LOC_Os01g73750	Leucine Rich Repeat family protein, expressed	gene	Leucine Rich Repeat family protein, expressed	chr1	42714680	42720518	+	CDS,downstream
3	LOC_Os10g18070	expressed protein	gene	expressed protein	chr10	9087181	9093643	+	CDS
3	LOC_Os06g47760	phytosulfokine receptor precursor, putative, expressed	gene	phytosulfokine receptor precursor, putative, expressed	chr6	28904579	28908091	-	CDS,three_prime_UTR
3	LOC_Os03g05800	expressed protein	gene	expressed protein	chr3	2896472	2899286	-	CDS,three_prime_UTR
3	LOC_Os04g40490	glycosyl hydrolase family 5 protein, putative, expressed	gene	glycosyl hydrolase family 5 protein, putative, expressed	chr4	23869746	23873819	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g30650	heavy metal-associated domain containing protein, expressed	gene	heavy metal-associated domain containing protein, expressed	chr2	18246701	18250165	+	CDS,three_prime_UTR
3	LOC_Os08g01740	VHS and GAT domain containing protein, expressed	gene	VHS and GAT domain containing protein, expressed	chr8	444543	449389	+	CDS,three_prime_UTR
3	LOC_Os01g40980	helicase, putative, expressed	gene	helicase, putative, expressed	chr1	23173773	23185932	-	CDS,three_prime_UTR
3	LOC_Os08g24380	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr8	14711938	14718612	-	CDS
3	LOC_Os06g01470	AGAP000326-PA, putative, expressed	gene	AGAP000326-PA, putative, expressed	chr6	281348	283950	+	three_prime_UTR
3	LOC_Os07g08970	uncharacterized protein ycf45, putative, expressed	gene	uncharacterized protein ycf45, putative, expressed	chr7	4662406	4666458	-	CDS,three_prime_UTR
3	LOC_Os01g18290	helix-loop-helix DNA-binding domain containing protein, expressed	gene	helix-loop-helix DNA-binding domain containing protein, expressed	chr1	10269968	10273384	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g07110	calmodulin-binding protein, putative, expressed	gene	calmodulin-binding protein, putative, expressed	chr3	3629769	3634521	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g06460	dihydrolipoyl dehydrogenase, putative, expressed	gene	dihydrolipoyl dehydrogenase, putative, expressed	chr5	3313367	3319693	-	CDS
3	LOC_Os01g10450	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr1	5509516	5513480	-	CDS
3	LOC_Os05g46030	myosin head family protein, expressed	gene	myosin head family protein, expressed	chr5	26623337	26642116	+	CDS,downstream
3	LOC_Os06g49940	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr6	30233849	30235216	-	five_prime_UTR,CDS,downstream
3	LOC_Os07g35310	TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed	gene	TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed	chr7	21132035	21139740	-	CDS,downstream
3	LOC_Os06g50715	hypothetical protein	gene	hypothetical protein	chr6	30685425	30686999	-	CDS,promoter
3	LOC_Os01g24090	TPR repeat, putative, expressed	gene	TPR repeat, putative, expressed	chr1	13581010	13583891	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g42070	OsWAK129b - OsWAK receptor-like protein kinase, expressed	gene	OsWAK129b - OsWAK receptor-like protein kinase, expressed	chr12	26060046	26064120	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g27450	ADP-ribosylation factor, putative, expressed	gene	ADP-ribosylation factor, putative, expressed	chr3	15745919	15751025	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g11230	Ser/Thr protein phosphatase family protein, putative, expressed	gene	Ser/Thr protein phosphatase family protein, putative, expressed	chr9	6232843	6237922	+	CDS,three_prime_UTR
3	LOC_Os08g01900	armadillo/beta-catenin repeat family protein, putative, expressed	gene	armadillo/beta-catenin repeat family protein, putative, expressed	chr8	550574	555931	+	CDS,three_prime_UTR
3	LOC_Os08g34650	receptor-like protein kinase precursor, putative, expressed	gene	receptor-like protein kinase precursor, putative, expressed	chr8	21762623	21768588	-	CDS,three_prime_UTR
3	LOC_Os05g11770	ulp1 protease family protein, putative, expressed	gene	ulp1 protease family protein, putative, expressed	chr5	6678149	6692652	+	CDS
3	LOC_Os04g57819	DHHC zinc finger domain containing protein, expressed	gene	DHHC zinc finger domain containing protein, expressed	chr4	34242688	34246562	+	three_prime_UTR,promoter,downstream
3	LOC_Os11g25160	tropinone reductase 2, putative, expressed	gene	tropinone reductase 2, putative, expressed	chr11	13865499	13872494	+	three_prime_UTR
3	LOC_Os10g22039	mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	gene	mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	chr10	11311893	11317172	+	CDS,three_prime_UTR
3	LOC_Os06g30390	oxidoreductase/ transition metal ion binding protein, putative, expressed	gene	oxidoreductase/ transition metal ion binding protein, putative, expressed	chr6	17554788	17561496	+	CDS,downstream
3	LOC_Os04g40430	surfeit locus protein, putative, expressed	gene	surfeit locus protein, putative, expressed	chr4	23841492	23843914	+	CDS,three_prime_UTR,promoter
3	LOC_Os06g12260	N-rich protein, putative, expressed	gene	N-rich protein, putative, expressed	chr6	6594941	6601477	-	three_prime_UTR,CDS
3	LOC_Os01g51290	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr1	29482162	29491511	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g44015	growth regulator related protein, putative, expressed	gene	growth regulator related protein, putative, expressed	chr8	27705452	27709936	+	CDS,three_prime_UTR,promoter
3	LOC_Os08g06530	rubredoxin family protein, putative, expressed	gene	rubredoxin family protein, putative, expressed	chr8	3693285	3695651	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os11g35840	conserved hypothetical protein	gene	conserved hypothetical protein	chr11	20565230	20570633	+	CDS
3	LOC_Os08g44260	inositol or phosphatidylinositol phosphatase/ phosphoric monoester hydrolase, putative, expressed	gene	inositol or phosphatidylinositol phosphatase/ phosphoric monoester hydrolase, putative, expressed	chr8	27856282	27865603	-	three_prime_UTR,CDS,promoter
3	LOC_Os07g42714	expressed protein	gene	expressed protein	chr7	25568081	25571705	+	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g08770	modifier of rudimentary protein, expressed	gene	modifier of rudimentary protein, expressed	chr3	4531888	4535627	+	CDS,three_prime_UTR
3	LOC_Os09g33520	expressed protein	gene	expressed protein	chr9	19769214	19774621	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g32830	expressed protein	gene	expressed protein	chr1	18012629	18015981	-	three_prime_UTR,promoter
3	LOC_Os05g41060	ADP-ribosylation factor, putative, expressed	gene	ADP-ribosylation factor, putative, expressed	chr5	23994545	23998055	-	CDS,three_prime_UTR
3	LOC_Os01g21420	pre-mRNA-splicing factor SF2, putative, expressed	gene	pre-mRNA-splicing factor SF2, putative, expressed	chr1	11955842	11963786	+	CDS
3	LOC_Os01g42950	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr1	24427596	24435385	+	three_prime_UTR,CDS
3	LOC_Os07g42354	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr7	25332315	25337736	+	CDS,downstream
3	LOC_Os05g27870	expressed protein	gene	expressed protein	chr5	16195508	16207593	-	CDS
3	LOC_Os07g42600	aminotransferase, classes I and II, domain containing protein, expressed	gene	aminotransferase, classes I and II, domain containing protein, expressed	chr7	25491723	25496550	-	CDS,three_prime_UTR
3	LOC_Os01g74146	WD repeat-containing protein, putative, expressed	gene	WD repeat-containing protein, putative, expressed	chr1	42948370	42951670	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g36930	ubiquitin carboxyl-terminal hydrolase 6, putative, expressed	gene	ubiquitin carboxyl-terminal hydrolase 6, putative, expressed	chr1	20580570	20588538	-	CDS,three_prime_UTR
3	LOC_Os03g50480	phosphoglucomutase, putative, expressed	gene	phosphoglucomutase, putative, expressed	chr3	28806624	28813215	+	CDS
3	LOC_Os07g05820	hydroxyacid oxidase 1, putative, expressed	gene	hydroxyacid oxidase 1, putative, expressed	chr7	2796692	2800365	+	CDS,promoter
3	LOC_Os03g10920	syntaxin 6, N-terminal domain containing protein, expressed	gene	syntaxin 6, N-terminal domain containing protein, expressed	chr3	5608827	5611739	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g51330	maltose excess protein 1-like, chloroplast precursor, putative, expressed	gene	maltose excess protein 1-like, chloroplast precursor, putative, expressed	chr4	30211781	30216811	-	CDS,three_prime_UTR
3	LOC_Os02g40454	serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed	gene	serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed	chr2	24521038	24525092	-	three_prime_UTR,promoter,downstream
3	LOC_Os03g25620	LTV1, putative, expressed	gene	LTV1, putative, expressed	chr3	14669463	14673667	+	CDS,three_prime_UTR
3	LOC_Os01g70160	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr1	40606488	40609298	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g14280	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr7	8142515	8144930	-	CDS,three_prime_UTR
3	LOC_Os02g18550	40S ribosomal protein S3a, putative, expressed	gene	40S ribosomal protein S3a, putative, expressed	chr2	10822641	10825725	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g06800	serine esterase family protein, putative, expressed	gene	serine esterase family protein, putative, expressed	chr12	3295491	3301862	-	CDS,three_prime_UTR
3	LOC_Os04g55730	alpha-N-acetylglucosaminidase, putative, expressed	gene	alpha-N-acetylglucosaminidase, putative, expressed	chr4	32985096	32994229	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g56590	guanine nucleotide exchange family protein, putative, expressed	gene	guanine nucleotide exchange family protein, putative, expressed	chr1	32623126	32646004	+	CDS,promoter
3	LOC_Os10g32770	WD repeat-containing protein, putative, expressed	gene	WD repeat-containing protein, putative, expressed	chr10	17086875	17091969	-	five_prime_UTR,CDS
3	LOC_Os05g27320	VHS and GAT domain containing protein, expressed	gene	VHS and GAT domain containing protein, expressed	chr5	15815416	15822967	-	CDS
3	LOC_Os01g08580	frigida, putative, expressed	gene	frigida, putative, expressed	chr1	4271797	4275333	-	CDS
3	LOC_Os04g44620	hus1-like protein, expressed	gene	hus1-like protein, expressed	chr4	26212630	26219583	-	CDS,three_prime_UTR
3	LOC_Os01g41010	DUF581 domain containing protein, expressed	gene	DUF581 domain containing protein, expressed	chr1	23223189	23225606	+	three_prime_UTR,downstream
3	LOC_Os06g51480	expressed protein	gene	expressed protein	chr6	31180598	31183728	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g10800	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr1	5763652	5766959	-	CDS,promoter
3	LOC_Os03g18590	malonyl CoA-acyl carrier protein transacylase, mitochondrial precursor, putative, expressed	gene	malonyl CoA-acyl carrier protein transacylase, mitochondrial precursor, putative, expressed	chr3	10399664	10403211	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g05880	exo70 exocyst complex subunit, putative, expressed	gene	exo70 exocyst complex subunit, putative, expressed	chr11	2755659	2760888	-	CDS
3	LOC_Os03g53650	cysteine synthase, putative, expressed	gene	cysteine synthase, putative, expressed	chr3	30752891	30756850	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g40700	steroid nuclear receptor, ligand-binding, putative, expressed	gene	steroid nuclear receptor, ligand-binding, putative, expressed	chr4	23971369	23975973	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os05g49980	OsFBL26 - F-box domain and LRR containing protein, expressed	gene	OsFBL26 - F-box domain and LRR containing protein, expressed	chr5	28600614	28604338	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os11g45930	NBS-LRR type disease resistance protein, putative, expressed	gene	NBS-LRR type disease resistance protein, putative, expressed	chr11	27322163	27326207	+	CDS
3	LOC_Os07g03100	OsFBX212 - F-box domain containing protein, expressed	gene	OsFBX212 - F-box domain containing protein, expressed	chr7	1179230	1181971	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g16050	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr6	9129958	9133121	-	CDS,three_prime_UTR
3	LOC_Os09g25370	deoxyhypusine synthase, putative, expressed	gene	deoxyhypusine synthase, putative, expressed	chr9	15203132	15206864	-	CDS,promoter,downstream
3	LOC_Os02g35060	RNA methyltransferase protein, putative, expressed	gene	RNA methyltransferase protein, putative, expressed	chr2	21033743	21036869	-	three_prime_UTR,promoter,downstream
3	LOC_Os02g07040	biotin--protein ligase, putative, expressed	gene	biotin--protein ligase, putative, expressed	chr2	3607086	3610231	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g36480	XAP5 family protein, putative, expressed	gene	XAP5 family protein, putative, expressed	chr9	21050153	21053539	+	CDS,three_prime_UTR
3	LOC_Os05g39370	hypothetical protein	gene	hypothetical protein	chr5	23026938	23033027	+	CDS
3	LOC_Os03g43900	phosphatidylinositol N-acetylglucosaminyltransferase subunit P, putative, expressed	gene	phosphatidylinositol N-acetylglucosaminyltransferase subunit P, putative, expressed	chr3	24628232	24632862	-	three_prime_UTR
3	LOC_Os07g42440	hydroxyacid oxidase 1, putative, expressed	gene	hydroxyacid oxidase 1, putative, expressed	chr7	25407338	25412877	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g35940	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr12	21931257	21936552	-	CDS,three_prime_UTR
3	LOC_Os12g29350	ATP binding protein, putative, expressed	gene	ATP binding protein, putative, expressed	chr12	17409566	17419419	-	CDS,three_prime_UTR
3	LOC_Os06g46060	expressed protein	gene	expressed protein	chr6	27922526	27925282	-	three_prime_UTR,promoter
3	LOC_Os11g08590	expressed protein	gene	expressed protein	chr11	4553405	4562257	-	three_prime_UTR
3	LOC_Os02g01350	expressed protein	gene	expressed protein	chr2	187478	192123	-	CDS,three_prime_UTR
3	LOC_Os06g06430	expressed protein	gene	expressed protein	chr6	2998108	3000747	+	three_prime_UTR,promoter,downstream
3	LOC_Os10g40540	enoyl-CoA hydratase/isomerase family protein, putative, expressed	gene	enoyl-CoA hydratase/isomerase family protein, putative, expressed	chr10	21629199	21633277	-	CDS,three_prime_UTR
3	LOC_Os01g43000	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr1	24487854	24490348	-	CDS
3	LOC_Os02g19330	expressed protein	gene	expressed protein	chr2	11292517	11300300	-	CDS,three_prime_UTR
3	LOC_Os05g45510	expressed protein	gene	expressed protein	chr5	26323219	26325066	+	three_prime_UTR,promoter,downstream
3	LOC_Os06g11410	cyclin, putative, expressed	gene	cyclin, putative, expressed	chr6	6018598	6020862	+	CDS
3	LOC_Os10g41730	expressed protein	gene	expressed protein	chr10	22392834	22395026	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g43170	hydroxymethylglutaryl-CoA synthase, putative, expressed	gene	hydroxymethylglutaryl-CoA synthase, putative, expressed	chr8	27299519	27305017	+	CDS,three_prime_UTR
3	LOC_Os11g43490	expressed protein	gene	expressed protein	chr11	25787135	25788071	+	three_prime_UTR,downstream
3	LOC_Os05g49760	dehydrogenase, putative, expressed	gene	dehydrogenase, putative, expressed	chr5	28484900	28489329	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g48050	RING zinc finger protein, putative, expressed	gene	RING zinc finger protein, putative, expressed	chr4	28406556	28410598	-	CDS,three_prime_UTR
3	LOC_Os02g09380	expressed protein	gene	expressed protein	chr2	4820461	4822682	+	CDS,three_prime_UTR
3	LOC_Os03g18210	basic helix-loop-helix, putative, expressed	gene	basic helix-loop-helix, putative, expressed	chr3	10211307	10214685	+	CDS,three_prime_UTR
3	LOC_Os06g47530	TKL_IRAK_DUF26-lh.6 - DUF26 kinases have homology to DUF26 containing loci, expressed	gene	TKL_IRAK_DUF26-lh.6 - DUF26 kinases have homology to DUF26 containing loci, expressed	chr6	28768507	28773433	-	CDS,three_prime_UTR
3	LOC_Os02g04260	expressed protein	gene	expressed protein	chr2	1878983	1882476	-	CDS
3	LOC_Os03g25980	polypyrimidine tract-binding protein, putative, expressed	gene	polypyrimidine tract-binding protein, putative, expressed	chr3	14877399	14882422	+	CDS,three_prime_UTR
3	LOC_Os02g10070	citrate synthase, putative, expressed	gene	citrate synthase, putative, expressed	chr2	5242702	5249323	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g64700	OsFBT3 - F-box and tubby domain containing protein, expressed	gene	OsFBT3 - F-box and tubby domain containing protein, expressed	chr1	37534903	37538343	+	CDS
3	LOC_Os04g55930	expressed protein	gene	expressed protein	chr4	33125903	33127941	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g41550	expressed protein	gene	expressed protein	chr5	24261874	24267359	-	three_prime_UTR
3	LOC_Os08g25900	PsbP, putative, expressed	gene	PsbP, putative, expressed	chr8	15765802	15770505	-	CDS
3	LOC_Os03g03440	expressed protein	gene	expressed protein	chr3	1483200	1485489	+	three_prime_UTR,promoter,downstream
3	LOC_Os04g57660	phytosulfokine receptor precursor, putative, expressed	gene	phytosulfokine receptor precursor, putative, expressed	chr4	34144611	34147099	-	CDS,downstream
3	LOC_Os02g17360	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr2	9981495	9985905	-	CDS,three_prime_UTR
3	LOC_Os02g47160	OsWAK17 - OsWAK short gene, expressed	gene	OsWAK17 - OsWAK short gene, expressed	chr2	28783401	28789056	+	CDS,downstream
3	LOC_Os03g51910	basic helix-loop-helix protein, putative, expressed	gene	basic helix-loop-helix protein, putative, expressed	chr3	29767850	29769950	-	CDS,promoter
3	LOC_Os11g05000	expressed protein	gene	expressed protein	chr11	2150519	2153474	-	CDS
3	LOC_Os06g36840	cysteine synthase, putative, expressed	gene	cysteine synthase, putative, expressed	chr6	21699481	21702433	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g48670	OsFBT10 - F-box and tubby domain containing protein, expressed	gene	OsFBT10 - F-box and tubby domain containing protein, expressed	chr5	27829979	27833173	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g15420	nucampholin, putative, expressed	gene	nucampholin, putative, expressed	chr12	8798597	8805173	+	CDS,three_prime_UTR,promoter
3	LOC_Os08g13070	MBTB23 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed	gene	MBTB23 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed	chr8	7759524	7761246	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g20554	ATP-dependent RNA helicase, putative, expressed	gene	ATP-dependent RNA helicase, putative, expressed	chr11	11903086	11919239	+	CDS
3	LOC_Os03g08020	elongation factor Tu, putative, expressed	gene	elongation factor Tu, putative, expressed	chr3	4099737	4101675	+	CDS
3	LOC_Os05g24140	tetracycline transporter-like protein 1, putative, expressed	gene	tetracycline transporter-like protein 1, putative, expressed	chr5	13870216	13871657	+	five_prime_UTR,CDS,promoter
3	LOC_Os03g04320	hypothetical protein	gene	hypothetical protein	chr3	1989592	1995015	-	CDS
3	LOC_Os05g06910	expressed protein	gene	expressed protein	chr5	3614614	3619067	+	CDS
3	LOC_Os02g54200	mitochondrial transcription termination factor family protein, putative, expressed	gene	mitochondrial transcription termination factor family protein, putative, expressed	chr2	33218155	33221808	-	three_prime_UTR
3	LOC_Os01g23590	suppressor of Mek, putative, expressed	gene	suppressor of Mek, putative, expressed	chr1	13245361	13261202	-	CDS,three_prime_UTR
3	LOC_Os05g08810	phosphatidylinositol 3-kinase, root isoform, putative, expressed	gene	phosphatidylinositol 3-kinase, root isoform, putative, expressed	chr5	4854150	4865654	-	CDS,three_prime_UTR
3	LOC_Os05g12474	expressed protein	gene	expressed protein	chr5	7161570	7168476	+	CDS
3	LOC_Os04g49430	ZR1 protein, putative	gene	ZR1 protein, putative	chr4	29308795	29313818	+	CDS
3	LOC_Os01g15399	expressed protein	gene	expressed protein	chr1	8629317	8632592	-	three_prime_UTR,promoter
3	LOC_Os08g27070	co-chaperone protein SBA1, putative, expressed	gene	co-chaperone protein SBA1, putative, expressed	chr8	16535594	16539985	-	CDS
3	LOC_Os05g50810	CAMK_CAMK_like.5 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.5 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr5	29077785	29081907	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g15470	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr1	8681929	8686581	+	CDS,three_prime_UTR
3	LOC_Os04g51300	peroxidase precursor, putative, expressed	gene	peroxidase precursor, putative, expressed	chr4	30200389	30203714	+	CDS,three_prime_UTR
3	LOC_Os05g04150	expressed protein	gene	expressed protein	chr5	1859651	1863518	+	CDS,three_prime_UTR
3	LOC_Os08g41040	expressed protein	gene	expressed protein	chr8	25950183	25952054	-	CDS,three_prime_UTR
3	LOC_Os10g40050	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr10	21374357	21382057	-	CDS,downstream
3	LOC_Os07g17360	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr7	10246759	10251697	+	CDS,three_prime_UTR
3	LOC_Os09g11450	transporter, monovalent cation:proton antiporter-2 family, putative, expressed	gene	transporter, monovalent cation:proton antiporter-2 family, putative, expressed	chr9	6372268	6382644	-	CDS
3	LOC_Os03g01490	expressed protein	gene	expressed protein	chr3	321412	322641	+	CDS,downstream
3	LOC_Os03g50130	microsomal glutathione S-transferase 3, putative, expressed	gene	microsomal glutathione S-transferase 3, putative, expressed	chr3	28587412	28589395	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g33660	SNF7 domain containing protein, putative, expressed	gene	SNF7 domain containing protein, putative, expressed	chr10	17675392	17678837	-	CDS,three_prime_UTR
3	LOC_Os11g47130	protein transporter, putative, expressed	gene	protein transporter, putative, expressed	chr11	27816830	27824639	+	CDS,three_prime_UTR
3	LOC_Os03g43390	F-box/LRR domain containing protein, putative, expressed	gene	F-box/LRR domain containing protein, putative, expressed	chr3	24187896	24195477	+	CDS,three_prime_UTR
3	LOC_Os02g17700	pyridine nucleotide-disulphide oxidoreductase domain containing protein, expressed	gene	pyridine nucleotide-disulphide oxidoreductase domain containing protein, expressed	chr2	10207337	10212954	+	CDS
3	LOC_Os12g15222	expressed protein	gene	expressed protein	chr12	8667435	8676890	-	three_prime_UTR,promoter
3	LOC_Os01g03020	tRNA synthetase class I, putative, expressed	gene	tRNA synthetase class I, putative, expressed	chr1	1144829	1154094	-	CDS,three_prime_UTR,downstream
3	LOC_Os05g28170	expressed protein	gene	expressed protein	chr5	16410522	16415316	-	three_prime_UTR,promoter
3	LOC_Os07g42180	exportin 1, putative, expressed	gene	exportin 1, putative, expressed	chr7	25238771	25247472	+	CDS,three_prime_UTR
3	LOC_Os08g12680	zinc finger domain, LSD1 subclass family protein, expressed	gene	zinc finger domain, LSD1 subclass family protein, expressed	chr8	7487658	7509522	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g39630	DNA repair protein Rad51, putative, expressed	gene	DNA repair protein Rad51, putative, expressed	chr1	22352145	22357360	-	CDS,three_prime_UTR
3	LOC_Os08g08592	expressed protein	gene	expressed protein	chr8	4970049	4972857	-	three_prime_UTR
3	LOC_Os12g44330	serine/threonine-protein kinase PRP4, putative, expressed	gene	serine/threonine-protein kinase PRP4, putative, expressed	chr12	27446516	27452929	-	three_prime_UTR,promoter
3	LOC_Os02g09920	PHD-finger domain containing protein, putative, expressed	gene	PHD-finger domain containing protein, putative, expressed	chr2	5145545	5151128	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g22430	OsFBDUF3 - F-box and DUF domain containing protein, expressed	gene	OsFBDUF3 - F-box and DUF domain containing protein, expressed	chr1	12614622	12616219	-	CDS
3	LOC_Os08g23280	expressed protein	gene	expressed protein	chr8	14045192	14048639	+	CDS
3	LOC_Os08g22149	CBS domain containing membrane protein, putative, expressed	gene	CBS domain containing membrane protein, putative, expressed	chr8	13356498	13365130	+	CDS
3	LOC_Os09g04995	expressed protein	gene	expressed protein	chr9	2687913	2690284	-	three_prime_UTR,promoter
3	LOC_Os06g09840	expressed protein	gene	expressed protein	chr6	5007192	5009735	+	three_prime_UTR,promoter,downstream
3	LOC_Os05g44810	OsIAA18 - Auxin-responsive Aux/IAA gene family member, expressed	gene	OsIAA18 - Auxin-responsive Aux/IAA gene family member, expressed	chr5	25990336	25993688	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g26550	protease Do-like 14, putative, expressed	gene	protease Do-like 14, putative, expressed	chr9	16048137	16058300	+	CDS
3	LOC_Os11g45840	expressed protein	gene	expressed protein	chr11	27262958	27265702	+	CDS,promoter,downstream
3	LOC_Os05g38670	cation efflux family protein, putative	gene	cation efflux family protein, putative	chr5	22608369	22612079	+	CDS
3	LOC_Os03g15600	expressed protein	gene	expressed protein	chr3	8602877	8608039	-	three_prime_UTR
3	LOC_Os02g43090	myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed	gene	myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed	chr2	25940521	25949458	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g46540	cell division cycle protein 23, putative, expressed	gene	cell division cycle protein 23, putative, expressed	chr6	28255525	28259342	+	CDS
3	LOC_Os10g07534	disease resistance protein RPM1, putative, expressed	gene	disease resistance protein RPM1, putative, expressed	chr10	4025918	4028671	+	CDS,promoter
3	LOC_Os05g06630	expressed protein	gene	expressed protein	chr5	3424642	3428803	+	CDS,three_prime_UTR
3	LOC_Os03g20860	expressed protein	gene	expressed protein	chr3	11807069	11811921	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g10660	B-box zinc finger family protein, putative, expressed	gene	B-box zinc finger family protein, putative, expressed	chr12	5698772	5701407	+	three_prime_UTR,downstream
3	LOC_Os06g05180	coatomer subunit beta, putative, expressed	gene	coatomer subunit beta, putative, expressed	chr6	2319806	2328667	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g10434	expressed protein	gene	expressed protein	chr11	5675853	5679787	-	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os05g50200	expressed protein	gene	expressed protein	chr5	28704401	28711459	-	CDS,three_prime_UTR
3	LOC_Os05g49140	CGMC_MAPKCMGC_2.8 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	gene	CGMC_MAPKCMGC_2.8 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	chr5	28126117	28131380	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g65240	transposon protein, putative, Pong sub-class, expressed	gene	transposon protein, putative, Pong sub-class, expressed	chr1	37859039	37861088	-	five_prime_UTR,CDS
3	LOC_Os03g48920	DUF1517 domain containing protein, putative, expressed	gene	DUF1517 domain containing protein, putative, expressed	chr3	27847815	27851560	+	three_prime_UTR,CDS,downstream
3	LOC_Os09g34140	expressed protein	gene	expressed protein	chr9	20155912	20157775	+	three_prime_UTR,downstream
3	LOC_Os12g32670	CC-NBS-LRR resistance protein, putative, expressed	gene	CC-NBS-LRR resistance protein, putative, expressed	chr12	19687578	19691462	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g53640	expressed protein	gene	expressed protein	chr3	30748678	30750397	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g04650	activator of 90 kDa heat shock protein ATPase homolog, putative, expressed	gene	activator of 90 kDa heat shock protein ATPase homolog, putative, expressed	chr2	2082474	2085271	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g35530	hydrolase, alpha/beta fold family domain containing protein, expressed	gene	hydrolase, alpha/beta fold family domain containing protein, expressed	chr10	18930771	18932731	+	three_prime_UTR,promoter,downstream
3	LOC_Os04g33210	ERD1 protein, chloroplast precursor, putative, expressed	gene	ERD1 protein, chloroplast precursor, putative, expressed	chr4	19922218	19927766	+	CDS,downstream
3	LOC_Os02g10490	expressed protein	gene	expressed protein	chr2	5511434	5517919	-	CDS,promoter
3	LOC_Os02g38574	EMB2423, putative	gene	EMB2423, putative	chr2	23319092	23320290	+	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g05600	expressed protein	gene	expressed protein	chr2	2722134	2725216	+	five_prime_UTR
3	LOC_Os04g08320	YIF1B, putative, expressed	gene	YIF1B, putative, expressed	chr4	4437485	4439608	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g01220	expressed protein	gene	expressed protein	chr11	128995	133454	-	CDS,three_prime_UTR
3	LOC_Os01g49350	DUF292 domain containing protein, expressed	gene	DUF292 domain containing protein, expressed	chr1	28369811	28373464	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g54700	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr2	33487552	33489978	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g07120	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr1	3355383	3360204	+	three_prime_UTR,downstream
3	LOC_Os08g04630	external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor, putative, expressed	gene	external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor, putative, expressed	chr8	2308722	2314264	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g44380	sucrose transporter, putativ, expressed	gene	sucrose transporter, putativ, expressed	chr12	27480297	27484609	-	CDS,three_prime_UTR,downstream
3	LOC_Os02g05940	phytosulfokine receptor precursor, putative, expressed	gene	phytosulfokine receptor precursor, putative, expressed	chr2	2952129	2955764	-	CDS,downstream
3	LOC_Os01g11260	phospho-N-acetylmuramoyl-pentapeptide-transferase, putative, expressed	gene	phospho-N-acetylmuramoyl-pentapeptide-transferase, putative, expressed	chr1	6024074	6028649	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g27830	expressed protein	gene	expressed protein	chr3	15965654	15968460	-	three_prime_UTR,promoter
3	LOC_Os02g04560	marker Xucw84, putative, expressed	gene	marker Xucw84, putative, expressed	chr2	2037523	2040435	+	CDS,three_prime_UTR
3	LOC_Os11g42040	non-TIR-NBS-LRR type resistance protein, putative, expressed	gene	non-TIR-NBS-LRR type resistance protein, putative, expressed	chr11	24822969	24827794	-	CDS
3	LOC_Os06g43550	expressed protein	gene	expressed protein	chr6	26182310	26186107	-	CDS,three_prime_UTR
3	LOC_Os03g12300	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr3	6467312	6475443	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g14840	expressed protein	gene	expressed protein	chr12	8492220	8495385	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g52720	Cupin domain containing protein, expressed	gene	Cupin domain containing protein, expressed	chr4	31207774	31210083	-	three_prime_UTR,promoter
3	LOC_Os07g44004	expressed protein	gene	expressed protein	chr7	26301464	26305458	+	five_prime_UTR
3	LOC_Os05g11840	expressed protein	gene	expressed protein	chr5	6750740	6752055	+	three_prime_UTR,downstream
3	LOC_Os05g20050	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr5	11723410	11725652	-	CDS,three_prime_UTR
3	LOC_Os06g22810	TKL_IRAK_CrRLK1L-1.14 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed	gene	TKL_IRAK_CrRLK1L-1.14 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed	chr6	13296088	13300280	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g33730	ubiquinol-cytochrome C reductase hinge protein, putative, expressed	gene	ubiquinol-cytochrome C reductase hinge protein, putative, expressed	chr2	20119391	20124366	-	CDS,promoter
3	LOC_Os05g26820	CAMK_KIN1/SNF1/Nim1_like.20 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_KIN1/SNF1/Nim1_like.20 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr5	15498600	15502950	+	five_prime_UTR,CDS
3	LOC_Os08g25799	Myb transcription factor, putative, expressed	gene	Myb transcription factor, putative, expressed	chr8	15692820	15701246	+	CDS,three_prime_UTR
3	LOC_Os07g01720	expressed protein	gene	expressed protein	chr7	427798	430747	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g20340	SNF1-related protein kinase regulatory subunit beta-1, putative, expressed	gene	SNF1-related protein kinase regulatory subunit beta-1, putative, expressed	chr3	11506280	11511064	+	CDS
3	LOC_Os03g04920	multidrug resistance-associated protein, putative, expressed	gene	multidrug resistance-associated protein, putative, expressed	chr3	2366845	2373512	+	CDS,downstream
3	LOC_Os08g44470	expressed protein	gene	expressed protein	chr8	27965621	27967999	-	three_prime_UTR,promoter
3	LOC_Os09g23740	1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed	gene	1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed	chr9	14109002	14117238	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g13090	nucleic acid binding protein, putative, expressed	gene	nucleic acid binding protein, putative, expressed	chr1	7280734	7284992	+	CDS
3	LOC_Os02g34940	OsPDIL1-3  protein disulfide isomerase PDIL1-3, expressed	gene	OsPDIL1-3  protein disulfide isomerase PDIL1-3, expressed	chr2	20951339	20956089	-	CDS,downstream
3	LOC_Os03g21660	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr3	12360845	12364611	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g46710	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	28517389	28522754	+	CDS,downstream
3	LOC_Os05g06014	expressed protein	gene	expressed protein	chr5	3008623	3012695	-	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os11g03460	Mad3/BUB1 homology region 1 domain containing protein, expressed	gene	Mad3/BUB1 homology region 1 domain containing protein, expressed	chr11	1324460	1327969	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g40700	transmembrane protein 56, putative, expressed	gene	transmembrane protein 56, putative, expressed	chr5	23803174	23806955	+	CDS
3	LOC_Os04g51310	putrescine-binding periplasmic protein-related, putative, expressed	gene	putrescine-binding periplasmic protein-related, putative, expressed	chr4	30202757	30205606	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g28400	transport protein particle component, Bet3, domain containing protein, expressed	gene	transport protein particle component, Bet3, domain containing protein, expressed	chr3	16357315	16360940	-	CDS
3	LOC_Os08g10350	integral membrane family protein, putative, expressed	gene	integral membrane family protein, putative, expressed	chr8	6061777	6064398	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g32710	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr12	19725616	19729383	-	CDS
3	LOC_Os01g74580	dnaJ homolog subfamily C member, putative, expressed	gene	dnaJ homolog subfamily C member, putative, expressed	chr1	43188112	43192490	+	CDS
3	LOC_Os03g04600	expressed protein	gene	expressed protein	chr3	2144759	2149668	-	five_prime_UTR,CDS,promoter
3	LOC_Os11g26860	serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed	gene	serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed	chr11	14973022	14976357	+	CDS
3	LOC_Os04g04254	sterol 3-beta-glucosyltransferase, putative, expressed	gene	sterol 3-beta-glucosyltransferase, putative, expressed	chr4	1981230	1993544	-	CDS,three_prime_UTR
3	LOC_Os05g36190	OsFBT7 - F-box and tubby domain containing protein, expressed	gene	OsFBT7 - F-box and tubby domain containing protein, expressed	chr5	21397604	21400846	-	CDS,three_prime_UTR
3	LOC_Os05g22614	PTAC16, putative, expressed	gene	PTAC16, putative, expressed	chr5	12776381	12782342	-	CDS
3	LOC_Os04g20590	YL1 nuclear protein C-terminal domain containing protein, expressed	gene	YL1 nuclear protein C-terminal domain containing protein, expressed	chr4	11501408	11506539	-	CDS,three_prime_UTR
3	LOC_Os01g67730	1-5-phosphoribosyl-5-5-phosphoribosylaminomethylideneaminoimidazole-4-carboxamide isomerase, chloroplast precursor, putative, expressed	gene	1-5-phosphoribosyl-5-5-phosphoribosylaminomethylideneaminoimidazole-4-carboxamide isomerase, chloroplast precursor, putative, expressed	chr1	39362198	39364596	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g14350	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr7	8193029	8198892	+	CDS,three_prime_UTR
3	LOC_Os06g23504	DTW domain containing protein, putative, expressed	gene	DTW domain containing protein, putative, expressed	chr6	13703785	13721974	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g32660	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr12	19675258	19681652	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g04210	Ser/Thr protein phosphatase family protein, putative	gene	Ser/Thr protein phosphatase family protein, putative	chr7	1840997	1847577	+	CDS,downstream
3	LOC_Os08g39080	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr8	24682532	24691820	+	CDS,downstream
3	LOC_Os03g54980	expressed protein	gene	expressed protein	chr3	31248837	31252294	+	CDS,three_prime_UTR
3	LOC_Os06g20500	tRNA-splicing endonuclease positive effector-related, putative	gene	tRNA-splicing endonuclease positive effector-related, putative	chr6	11781149	11786800	-	CDS
3	LOC_Os07g30820	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr7	18240527	18245947	-	CDS,promoter
3	LOC_Os05g51630	early-responsive to dehydration protein-related, putative, expressed	gene	early-responsive to dehydration protein-related, putative, expressed	chr5	29545537	29553788	+	CDS
3	LOC_Os07g12200	ADP-ribosylation factor, putative, expressed	gene	ADP-ribosylation factor, putative, expressed	chr7	6822044	6824446	+	CDS,downstream
3	LOC_Os03g38930	expressed protein	gene	expressed protein	chr3	21621453	21627182	-	CDS,three_prime_UTR
3	LOC_Os08g39950	potassium transporter, putative, expressed	gene	potassium transporter, putative, expressed	chr8	25310822	25315856	+	CDS,three_prime_UTR
3	LOC_Os06g08005	galactosyltransferase family protein, putative, expressed	gene	galactosyltransferase family protein, putative, expressed	chr6	3877853	3881840	+	CDS
3	LOC_Os01g55390	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr1	31908515	31910606	+	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os08g32650	cation efflux family protein, putative, expressed	gene	cation efflux family protein, putative, expressed	chr8	20216356	20219272	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g01380	CW7, putative, expressed	gene	CW7, putative, expressed	chr10	227716	232969	+	CDS
3	LOC_Os04g50216	SNARE associated Golgi protein, putative, expressed	gene	SNARE associated Golgi protein, putative, expressed	chr4	29790106	29792702	-	CDS,three_prime_UTR
3	LOC_Os01g42960	TTL1, putative, expressed	gene	TTL1, putative, expressed	chr1	24459993	24464000	+	CDS,three_prime_UTR
3	LOC_Os01g48210	PAP/25A associated domain containing protein, putative, expressed	gene	PAP/25A associated domain containing protein, putative, expressed	chr1	27623576	27629318	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g01240	CCR4-Not complex component, Not1domain containing protein, expressed	gene	CCR4-Not complex component, Not1domain containing protein, expressed	chr3	151358	169125	+	CDS,downstream
3	LOC_Os08g36760	remorin C-terminal domain containing protein, putative, expressed	gene	remorin C-terminal domain containing protein, putative, expressed	chr8	23210433	23214913	+	CDS,downstream
3	LOC_Os07g26974	expressed protein	gene	expressed protein	chr7	15617336	15620988	-	CDS,promoter,downstream
3	LOC_Os03g29750	expressed protein	gene	expressed protein	chr3	16947400	16953606	+	CDS
3	LOC_Os11g07250	receptor kinase, putative, expressed	gene	receptor kinase, putative, expressed	chr11	3645478	3648698	+	CDS,promoter
3	LOC_Os05g39730	SAG20, putative, expressed	gene	SAG20, putative, expressed	chr5	23254625	23257454	-	CDS,three_prime_UTR
3	LOC_Os11g38990	peptidyl-prolyl cis-trans isomerase, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, putative, expressed	chr11	22746338	22751340	+	CDS,three_prime_UTR
3	LOC_Os09g28610	protein transport protein, putative, expressed	gene	protein transport protein, putative, expressed	chr9	17404810	17412208	+	CDS
3	LOC_Os10g35240	Rf1, mitochondrial precursor, putative, expressed	gene	Rf1, mitochondrial precursor, putative, expressed	chr10	18760733	18764605	-	three_prime_UTR
3	LOC_Os08g37940	HAD-superfamily hydrolase subfamily IA, variant 3, putative, expressed	gene	HAD-superfamily hydrolase subfamily IA, variant 3, putative, expressed	chr8	24020787	24024459	-	CDS
3	LOC_Os09g38030	UTP--glucose-1-phosphate uridylyltransferase, putative, expressed	gene	UTP--glucose-1-phosphate uridylyltransferase, putative, expressed	chr9	21916838	21921944	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g44150	plasma membrane ATPase, putative, expressed	gene	plasma membrane ATPase, putative, expressed	chr12	27353353	27360490	+	CDS,three_prime_UTR
3	LOC_Os12g31850	ureide permease, putative, expressed	gene	ureide permease, putative, expressed	chr12	19133168	19137854	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g49990	UPF0183 protein, putative, expressed	gene	UPF0183 protein, putative, expressed	chr6	30273471	30278004	-	CDS,three_prime_UTR,downstream
3	LOC_Os05g34914	expressed protein	gene	expressed protein	chr5	20675371	20678525	+	three_prime_UTR,downstream
3	LOC_Os02g01970	expressed protein	gene	expressed protein	chr2	540108	547449	+	three_prime_UTR
3	LOC_Os03g18400	expressed protein	gene	expressed protein	chr3	10313162	10315742	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g27840	phosphoenolpyruvate carboxylase, putative, expressed	gene	phosphoenolpyruvate carboxylase, putative, expressed	chr8	16961980	16967857	-	CDS
3	LOC_Os08g25734	glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed	gene	glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed	chr8	15663487	15669880	-	CDS
3	LOC_Os04g33440	DNA-binding protein S1FA, putative, expressed	gene	DNA-binding protein S1FA, putative, expressed	chr4	20052601	20054461	-	three_prime_UTR
3	LOC_Os12g01449	chloroplast unusual positioning protein, putative, expressed	gene	chloroplast unusual positioning protein, putative, expressed	chr12	272546	281070	-	CDS
3	LOC_Os05g44130	gamma-glutamyl hydrolase precursor, putative, expressed	gene	gamma-glutamyl hydrolase precursor, putative, expressed	chr5	25590626	25595149	-	three_prime_UTR,CDS
3	LOC_Os04g48710	expressed protein	gene	expressed protein	chr4	28857817	28861775	+	CDS,three_prime_UTR
3	LOC_Os01g08890	expressed protein	gene	expressed protein	chr1	4458084	4483478	-	five_prime_UTR,CDS,downstream
3	LOC_Os06g06720	flavonol synthase/flavanone 3-hydroxylase, putative, expressed	gene	flavonol synthase/flavanone 3-hydroxylase, putative, expressed	chr6	3144467	3146619	+	three_prime_UTR,downstream
3	LOC_Os03g24900	DHHC zinc finger domain containing protein, expressed	gene	DHHC zinc finger domain containing protein, expressed	chr3	14182317	14186870	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g05780	chromatin-remodeling complex ATPase chain, putative, expressed	gene	chromatin-remodeling complex ATPase chain, putative, expressed	chr5	2874301	2884757	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g20860	calmodulin-binding protein, putative, expressed	gene	calmodulin-binding protein, putative, expressed	chr9	12557110	12560813	-	three_prime_UTR
3	LOC_Os11g16320	expressed protein	gene	expressed protein	chr11	8995095	8999607	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g25440	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr7	14533485	14540927	-	CDS
3	LOC_Os02g10400	expressed protein	gene	expressed protein	chr2	5470929	5475134	-	CDS
3	LOC_Os02g01540	ribosomal protein, putative	gene	ribosomal protein, putative	chr2	307058	310927	+	CDS,downstream
3	LOC_Os03g50210	DUF292 domain containing protein, expressed	gene	DUF292 domain containing protein, expressed	chr3	28624697	28626431	+	three_prime_UTR,downstream
3	LOC_Os04g40250	hypothetical protein	gene	hypothetical protein	chr4	23754127	23756859	-	CDS,promoter
3	LOC_Os03g48970	nuclear transcription factor Y subunit, putative, expressed	gene	nuclear transcription factor Y subunit, putative, expressed	chr3	27883414	27887557	+	CDS,three_prime_UTR
3	LOC_Os12g26040	expressed protein	gene	expressed protein	chr12	15124017	15125336	+	CDS,downstream
3	LOC_Os11g38230	OsFBDUF61 - F-box and DUF domain containing protein	gene	OsFBDUF61 - F-box and DUF domain containing protein	chr11	22188010	22189419	-	CDS,promoter
3	LOC_Os03g06835	expressed protein	gene	expressed protein	chr3	3462645	3466636	+	three_prime_UTR
3	LOC_Os02g03730	SWIB/MDM2 domain containing protein, expressed	gene	SWIB/MDM2 domain containing protein, expressed	chr2	1563393	1565446	-	three_prime_UTR,promoter,downstream
3	LOC_Os10g35280	nucleolar complex protein 2, putative, expressed	gene	nucleolar complex protein 2, putative, expressed	chr10	18780668	18785902	-	CDS,downstream
3	LOC_Os07g30130	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr7	17776529	17779512	+	three_prime_UTR,promoter
3	LOC_Os07g36880	expressed protein	gene	expressed protein	chr7	22087007	22089417	+	three_prime_UTR,promoter
3	LOC_Os06g13070	hhH-GPD superfamily base excision DNA repair protein, putative, expressed	gene	hhH-GPD superfamily base excision DNA repair protein, putative, expressed	chr6	7168831	7171483	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g14070	DnaK family protein, putative, expressed	gene	DnaK family protein, putative, expressed	chr12	7983567	7989359	+	CDS,three_prime_UTR
3	LOC_Os03g52170	4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative, expressed	gene	4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative, expressed	chr3	29943050	29946945	-	CDS,three_prime_UTR
3	LOC_Os01g02290	Ser/Thr receptor-like kinase, putative, expressed	gene	Ser/Thr receptor-like kinase, putative, expressed	chr1	719629	722317	-	CDS
3	LOC_Os08g01690	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr8	398649	400424	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g48950	expressed protein	gene	expressed protein	chr3	27870997	27875415	+	CDS,three_prime_UTR
3	LOC_Os06g50146	calcium-dependent protein kinase CPK1 adapter protein 2, putative, expressed	gene	calcium-dependent protein kinase CPK1 adapter protein 2, putative, expressed	chr6	30366352	30369713	+	CDS,three_prime_UTR
3	LOC_Os12g41950	auxin response factor, putative, expressed	gene	auxin response factor, putative, expressed	chr12	25968753	25974809	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g06180	HVA22, putative, expressed	gene	HVA22, putative, expressed	chr12	2926945	2933408	+	CDS
3	LOC_Os12g10740	leucine-rich repeat family protein, putative, expressed	gene	leucine-rich repeat family protein, putative, expressed	chr12	5764936	5772365	+	CDS
3	LOC_Os04g48370	RNA polymerase IV subunit, putative, expressed	gene	RNA polymerase IV subunit, putative, expressed	chr4	28655352	28661741	+	CDS
3	LOC_Os03g16980	NAD dependent epimerase/dehydratase family domain containing protein, expressed	gene	NAD dependent epimerase/dehydratase family domain containing protein, expressed	chr3	9435419	9439592	+	CDS,three_prime_UTR
3	LOC_Os03g08560	plasma membrane ATPase, putative, expressed	gene	plasma membrane ATPase, putative, expressed	chr3	4401552	4407417	-	three_prime_UTR,promoter
3	LOC_Os08g38600	copine, putative, expressed	gene	copine, putative, expressed	chr8	24395200	24398610	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g28100	OsRhmbd15 - Putative Rhomboid homologue, expressed	gene	OsRhmbd15 - Putative Rhomboid homologue, expressed	chr9	17058794	17061358	+	three_prime_UTR,downstream
3	LOC_Os05g36090	zinc finger DHHC domain-containing protein, putative, expressed	gene	zinc finger DHHC domain-containing protein, putative, expressed	chr5	21326135	21330138	+	CDS
3	LOC_Os09g31478	auxin efflux carrier component, putative, expressed	gene	auxin efflux carrier component, putative, expressed	chr9	18977136	18982481	-	CDS,three_prime_UTR
3	LOC_Os12g13320	argininosuccinate synthase, chloroplast precursor, putative, expressed	gene	argininosuccinate synthase, chloroplast precursor, putative, expressed	chr12	7427937	7432087	+	CDS,three_prime_UTR
3	LOC_Os04g02670	hypothetical protein	gene	hypothetical protein	chr4	1003913	1005623	-	CDS,promoter
3	LOC_Os02g12880	calcium-binding EF hand family protein, putative, expressed	gene	calcium-binding EF hand family protein, putative, expressed	chr2	6798696	6802474	+	CDS,three_prime_UTR
3	LOC_Os09g11270	enhancer of polycomb, putative, expressed	gene	enhancer of polycomb, putative, expressed	chr9	6250862	6259858	-	CDS,three_prime_UTR
3	LOC_Os03g50280	GLTP domain containing protein, putative, expressed	gene	GLTP domain containing protein, putative, expressed	chr3	28648293	28650487	-	three_prime_UTR,promoter
3	LOC_Os03g57070	amine oxidase-related, putative, expressed	gene	amine oxidase-related, putative, expressed	chr3	32525153	32533072	+	three_prime_UTR,downstream
3	LOC_Os04g48310	RING-H2 finger protein, putative, expressed	gene	RING-H2 finger protein, putative, expressed	chr4	28603334	28606058	+	CDS,three_prime_UTR
3	LOC_Os04g39440	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr4	23307791	23310222	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g06290	splicing factor, arginine/serine-rich, putative, expressed	gene	splicing factor, arginine/serine-rich, putative, expressed	chr1	2984356	2988299	-	CDS,three_prime_UTR
3	LOC_Os03g35849	expressed protein	gene	expressed protein	chr3	19863206	19865751	-	five_prime_UTR,three_prime_UTR
3	LOC_Os06g42800	STRUBBELIG-RECEPTOR FAMILY 8 precursor, putative, expressed	gene	STRUBBELIG-RECEPTOR FAMILY 8 precursor, putative, expressed	chr6	25726516	25732224	-	CDS
3	LOC_Os01g64670	soluble inorganic pyrophosphatase, putative, expressed	gene	soluble inorganic pyrophosphatase, putative, expressed	chr1	37520760	37522997	-	three_prime_UTR,promoter
3	LOC_Os02g52390	M16 domain containing zinc peptidase, putative, expressed	gene	M16 domain containing zinc peptidase, putative, expressed	chr2	32056369	32064587	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g05830	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr3	2921834	2930549	-	CDS,promoter
3	LOC_Os01g62650	pumilio-family RNA binding protein, putative, expressed	gene	pumilio-family RNA binding protein, putative, expressed	chr1	36277910	36285360	+	CDS,three_prime_UTR
3	LOC_Os01g72200	expressed protein	gene	expressed protein	chr1	41863576	41865503	-	three_prime_UTR,promoter,downstream
3	LOC_Os07g45384	unknown	gene	unknown	chr7	27061720	27068110	-	three_prime_UTR
3	LOC_Os07g31670	hypothetical protein	gene	hypothetical protein	chr7	18809001	18810077	+	CDS,promoter
3	LOC_Os05g25194	metal cation transporter, putative, expressed	gene	metal cation transporter, putative, expressed	chr5	14540309	14548753	-	CDS,three_prime_UTR
3	LOC_Os07g39090	pentatricopeptide repeat domain containing protein, putative	gene	pentatricopeptide repeat domain containing protein, putative	chr7	23424412	23429893	-	CDS,promoter
3	LOC_Os04g46470	carotenoid cleavage dioxygenase 7, chloroplast precursor, putative, expressed	gene	carotenoid cleavage dioxygenase 7, chloroplast precursor, putative, expressed	chr4	27382685	27385787	+	three_prime_UTR,promoter,downstream
3	LOC_Os03g15940	OsWLIM2 - LIM domain protein, putative actin-binding protein and transcription factor, expressed	gene	OsWLIM2 - LIM domain protein, putative actin-binding protein and transcription factor, expressed	chr3	8796786	8798774	+	three_prime_UTR,downstream
3	LOC_Os06g04780	coiled-coil domain-containing protein 97, putative, expressed	gene	coiled-coil domain-containing protein 97, putative, expressed	chr6	2083593	2086401	+	CDS,three_prime_UTR
3	LOC_Os04g55040	vacuolar ATP synthase subunit D 1, putative, expressed	gene	vacuolar ATP synthase subunit D 1, putative, expressed	chr4	32547485	32550459	+	three_prime_UTR,downstream
3	LOC_Os07g44940	ATP12 ATPase, putative, expressed	gene	ATP12 ATPase, putative, expressed	chr7	26805428	26808069	-	CDS,promoter
3	LOC_Os03g62650	ion channel DMI1-like, chloroplast precursor, putative, expressed	gene	ion channel DMI1-like, chloroplast precursor, putative, expressed	chr3	35446292	35453286	+	CDS,three_prime_UTR
3	LOC_Os03g58110	uncharacterized protein At4g06744 precursor, putative, expressed	gene	uncharacterized protein At4g06744 precursor, putative, expressed	chr3	33076651	33078422	-	three_prime_UTR,promoter
3	LOC_Os06g19650	expressed protein	gene	expressed protein	chr6	11208826	11214344	+	CDS,three_prime_UTR
3	LOC_Os06g23530	pre-mRNA-splicing factor ATP-dependent RNA helicase, putative, expressed	gene	pre-mRNA-splicing factor ATP-dependent RNA helicase, putative, expressed	chr6	13722595	13726111	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g08770	YGGT family protein, putative, expressed	gene	YGGT family protein, putative, expressed	chr7	4508153	4512786	-	three_prime_UTR
3	LOC_Os05g28510	importin subunit beta, putative, expressed	gene	importin subunit beta, putative, expressed	chr5	16636432	16641276	+	CDS,three_prime_UTR
3	LOC_Os06g23560	anthocyanidin 5,3-O-glucosyltransferase, putative, expressed	gene	anthocyanidin 5,3-O-glucosyltransferase, putative, expressed	chr6	13742330	13744443	-	three_prime_UTR,promoter
3	LOC_Os02g03900	metal transporter Nramp6, putative, expressed	gene	metal transporter Nramp6, putative, expressed	chr2	1658576	1662644	-	CDS
3	LOC_Os07g09790	hypothetical protein	gene	hypothetical protein	chr7	5209781	5214081	-	CDS
3	LOC_Os03g64310	expressed protein	gene	expressed protein	chr3	36338424	36339823	-	three_prime_UTR,promoter
3	LOC_Os06g50548	hypothetical protein	gene	hypothetical protein	chr6	30603294	30604868	-	CDS,promoter,downstream
3	LOC_Os02g19440	sirohydrochlorin ferrochelatase, putative, expressed	gene	sirohydrochlorin ferrochelatase, putative, expressed	chr2	11353277	11357736	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os01g45460	serine esterase, putative, expressed	gene	serine esterase, putative, expressed	chr1	25791655	25796570	+	three_prime_UTR,downstream
3	LOC_Os01g25240	expressed protein	gene	expressed protein	chr1	14251903	14256358	+	CDS,downstream
3	LOC_Os03g47580	ubiquitin-conjugating enzyme, putative, expressed	gene	ubiquitin-conjugating enzyme, putative, expressed	chr3	26909226	26917696	-	CDS,three_prime_UTR
3	LOC_Os06g02555	expressed protein	gene	expressed protein	chr6	886899	890873	+	CDS,downstream
3	LOC_Os01g74510	KIP1, putative, expressed	gene	KIP1, putative, expressed	chr1	43153047	43157181	+	five_prime_UTR,CDS,promoter,downstream
3	LOC_Os04g31620	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr4	18761835	18766210	+	three_prime_UTR,downstream
3	LOC_Os03g56590	expressed protein	gene	expressed protein	chr3	32230829	32233826	-	CDS,three_prime_UTR
3	LOC_Os03g59330	polygalacturonase, putative, expressed	gene	polygalacturonase, putative, expressed	chr3	33770380	33774175	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g01440	nitric oxide synthase 1, putative, expressed	gene	nitric oxide synthase 1, putative, expressed	chr2	261348	265491	+	CDS
3	LOC_Os05g14860	seven in absentia protein family domain containing protein, expressed	gene	seven in absentia protein family domain containing protein, expressed	chr5	8440362	8445652	+	CDS
3	LOC_Os04g52560	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr4	31064572	31068930	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os11g31480	ATP binding protein, putative, expressed	gene	ATP binding protein, putative, expressed	chr11	17925339	17933364	-	CDS
3	LOC_Os04g59460	expressed protein	gene	expressed protein	chr4	35161997	35170509	-	CDS,promoter
3	LOC_Os12g04240	peflin, putative, expressed	gene	peflin, putative, expressed	chr12	1793262	1796406	-	CDS,three_prime_UTR
3	LOC_Os02g17500	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr2	10074579	10081510	+	CDS,three_prime_UTR
3	LOC_Os06g41840	reductase, putative, expressed	gene	reductase, putative, expressed	chr6	25085978	25089188	-	CDS,three_prime_UTR
3	LOC_Os05g45660	plasminogen activator inhibitor 1 RNA-binding protein, putative, expressed	gene	plasminogen activator inhibitor 1 RNA-binding protein, putative, expressed	chr5	26401445	26404728	+	three_prime_UTR,downstream
3	LOC_Os06g48990	Leucine Rich Repeat family protein, expressed	gene	Leucine Rich Repeat family protein, expressed	chr6	29678382	29689113	-	CDS,three_prime_UTR
3	LOC_Os03g55970	uncharacterized protein ycf44, putative, expressed	gene	uncharacterized protein ycf44, putative, expressed	chr3	31853326	31856278	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g01480	oxygen evolving enhancer protein 3 domain containing protein, expressed	gene	oxygen evolving enhancer protein 3 domain containing protein, expressed	chr7	305009	306555	+	three_prime_UTR,downstream
3	LOC_Os09g25330	BTBN19 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed	gene	BTBN19 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed	chr9	15162084	15167851	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g24910	nodulation protein-related, putative, expressed	gene	nodulation protein-related, putative, expressed	chr3	14187402	14191095	-	CDS,promoter
3	LOC_Os01g06790	disease resistance protein, putative, expressed	gene	disease resistance protein, putative, expressed	chr1	3221303	3225257	+	CDS
3	LOC_Os08g44000	uncharacterized protein ycf39, putative, expressed	gene	uncharacterized protein ycf39, putative, expressed	chr8	27692470	27697567	-	three_prime_UTR,promoter
3	LOC_Os08g41670	uncharacterized protein family UPF0016 domain containing protein, expressed	gene	uncharacterized protein family UPF0016 domain containing protein, expressed	chr8	26304729	26307665	-	three_prime_UTR,promoter,downstream
3	LOC_Os03g26229	40S ribosomal protein S9-1, putative, expressed	gene	40S ribosomal protein S9-1, putative, expressed	chr3	15004542	15006907	+	CDS,three_prime_UTR
3	LOC_Os06g35910	FYVE zinc finger domain containing protein, expressed	gene	FYVE zinc finger domain containing protein, expressed	chr6	20945147	20951751	-	three_prime_UTR,CDS
3	LOC_Os02g47930	expressed protein	gene	expressed protein	chr2	29314618	29317124	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g06030	phytosulfokine receptor precursor, putative, expressed	gene	phytosulfokine receptor precursor, putative, expressed	chr2	3005600	3007976	-	CDS
3	LOC_Os01g34080	armadillo/beta-catenin-like repeat family protein, expressed	gene	armadillo/beta-catenin-like repeat family protein, expressed	chr1	18762225	18773431	+	CDS,three_prime_UTR
3	LOC_Os03g20980	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr3	11901539	11906103	-	CDS
3	LOC_Os11g37260	SEY1, putative, expressed	gene	SEY1, putative, expressed	chr11	21537239	21544391	+	CDS
3	LOC_Os06g06370	expressed protein	gene	expressed protein	chr6	2965770	2972191	+	CDS,downstream
3	LOC_Os03g53230	bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase, putative, expressed	gene	bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase, putative, expressed	chr3	30524932	30528401	-	CDS,three_prime_UTR
3	LOC_Os03g19510	OsClp4 - Putative Clp protease homologue, expressed	gene	OsClp4 - Putative Clp protease homologue, expressed	chr3	10965416	10968544	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g16510	expressed protein	gene	expressed protein	chr1	9369575	9372650	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g44080	transmembrane protein, putative, expressed	gene	transmembrane protein, putative, expressed	chr5	25566224	25572454	+	CDS,three_prime_UTR
3	LOC_Os03g25420	expressed protein	gene	expressed protein	chr3	14532480	14535881	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g11034	caffeine-induced death protein 1, putative, expressed	gene	caffeine-induced death protein 1, putative, expressed	chr10	6121021	6126841	+	CDS
3	LOC_Os08g02370	galactosyltransferase family protein, putative, expressed	gene	galactosyltransferase family protein, putative, expressed	chr8	939839	943409	-	CDS
3	LOC_Os06g05804	trafficking protein particle complex subunit 4, putative, expressed	gene	trafficking protein particle complex subunit 4, putative, expressed	chr6	2641291	2644275	-	CDS
3	LOC_Os03g58130	thioredoxin, putative, expressed	gene	thioredoxin, putative, expressed	chr3	33089041	33092635	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g58480	seed specific protein Bn15D14A, putative, expressed	gene	seed specific protein Bn15D14A, putative, expressed	chr3	33303281	33307837	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g37530	expressed protein	gene	expressed protein	chr4	22152382	22154773	-	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os07g40550	IBS1, putative, expressed	gene	IBS1, putative, expressed	chr7	24291566	24297869	-	CDS,three_prime_UTR
3	LOC_Os01g70060	protein of unknown function, DUF618 domain containing protein, expressed	gene	protein of unknown function, DUF618 domain containing protein, expressed	chr1	40539921	40553708	-	CDS,three_prime_UTR,downstream
3	LOC_Os09g07640	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr9	3842922	3848038	+	CDS
3	LOC_Os04g49540	expressed protein	gene	expressed protein	chr4	29356295	29359568	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g17610	expressed protein	gene	expressed protein	chr8	10766797	10770228	+	CDS,three_prime_UTR
3	LOC_Os01g70210	CRAL/TRIO domain containing protein, expressed	gene	CRAL/TRIO domain containing protein, expressed	chr1	40643554	40647391	+	CDS
3	LOC_Os04g58410	smr domain containing protein, expressed	gene	smr domain containing protein, expressed	chr4	34566390	34570971	+	CDS,three_prime_UTR
3	LOC_Os05g38170	phosphoribosyl transferase, putative, expressed	gene	phosphoribosyl transferase, putative, expressed	chr5	22325389	22329899	-	CDS,promoter
3	LOC_Os08g08190	expressed protein	gene	expressed protein	chr8	4671404	4674501	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g53880	OsIAA6 - Auxin-responsive Aux/IAA gene family member, expressed	gene	OsIAA6 - Auxin-responsive Aux/IAA gene family member, expressed	chr1	30974721	30978726	+	CDS,downstream
3	LOC_Os08g01680	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr8	394228	399898	+	CDS,three_prime_UTR
3	LOC_Os02g57600	expressed protein	gene	expressed protein	chr2	35269273	35272713	+	CDS,three_prime_UTR,promoter
3	LOC_Os10g22170	expressed protein	gene	expressed protein	chr10	11389108	11393072	+	CDS,three_prime_UTR
3	LOC_Os03g50070	DUF1295 domain containing protein, putative, expressed	gene	DUF1295 domain containing protein, putative, expressed	chr3	28554010	28558053	+	CDS,three_prime_UTR
3	LOC_Os05g41280	transcription factor HBP-1b, putative	gene	transcription factor HBP-1b, putative	chr5	24117774	24119606	+	CDS,promoter
3	LOC_Os05g34540	rab GDP dissociation inhibitor alpha, putative, expressed	gene	rab GDP dissociation inhibitor alpha, putative, expressed	chr5	20414652	20421105	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g02094	saposin-like type B, region 1 family protein, putative, expressed	gene	saposin-like type B, region 1 family protein, putative, expressed	chr12	627305	629983	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g01110	OsSCP44 - Putative Serine Carboxypeptidase homologue, expressed	gene	OsSCP44 - Putative Serine Carboxypeptidase homologue, expressed	chr10	99327	102441	-	CDS
3	LOC_Os11g46970	receptor-like protein kinase 5 precursor, putative, expressed	gene	receptor-like protein kinase 5 precursor, putative, expressed	chr11	27705692	27709082	+	CDS,promoter
3	LOC_Os05g46570	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr5	26900326	26903262	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g37830	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr2	22816195	22820351	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os12g03720	glucosamine--fructose-6-phosphate aminotransferase 1, putative, expressed	gene	glucosamine--fructose-6-phosphate aminotransferase 1, putative, expressed	chr12	1499411	1504655	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g56180	dehydrogenase, putative, expressed	gene	dehydrogenase, putative, expressed	chr2	34361610	34363856	+	three_prime_UTR,downstream
3	LOC_Os12g32330	peroxisomal membrane protein, putative, expressed	gene	peroxisomal membrane protein, putative, expressed	chr12	19484781	19490127	+	CDS
3	LOC_Os04g57500	phosphatidate cytidylyltransferase, putative, expressed	gene	phosphatidate cytidylyltransferase, putative, expressed	chr4	34024130	34025989	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g02450	ATCHX, putative, expressed	gene	ATCHX, putative, expressed	chr8	980212	983446	+	three_prime_UTR,downstream
3	LOC_Os01g54990	auxin response factor, putative, expressed	gene	auxin response factor, putative, expressed	chr1	31616123	31622161	-	CDS,three_prime_UTR
3	LOC_Os07g31340	regulator of nonsense transcripts 1, putative, expressed	gene	regulator of nonsense transcripts 1, putative, expressed	chr7	18554549	18564226	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g31970	NHL repeat-containing protein, putative, expressed	gene	NHL repeat-containing protein, putative, expressed	chr8	19824062	19826962	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g05050	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr7	2224623	2230108	-	CDS,three_prime_UTR
3	LOC_Os12g03530	alpha-N-arabinofuranosidase, putative, expressed	gene	alpha-N-arabinofuranosidase, putative, expressed	chr12	1396392	1403943	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g57030	expressed protein	gene	expressed protein	chr2	34920767	34923520	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g02450	pyridoxamine 5'-phosphate oxidase family protein, putative, expressed	gene	pyridoxamine 5'-phosphate oxidase family protein, putative, expressed	chr3	877836	880505	+	three_prime_UTR,downstream
3	LOC_Os12g13174	expressed protein	gene	expressed protein	chr12	7338283	7342241	-	three_prime_UTR
3	LOC_Os05g46954	expressed protein	gene	expressed protein	chr5	27105926	27108757	+	three_prime_UTR,downstream
3	LOC_Os08g42960	ankyrin repeat-containing protein, putative, expressed	gene	ankyrin repeat-containing protein, putative, expressed	chr8	27153755	27157793	+	CDS
3	LOC_Os02g50760	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr2	30988505	30993130	+	CDS,three_prime_UTR
3	LOC_Os01g54440	expressed protein	gene	expressed protein	chr1	31319119	31320804	-	three_prime_UTR,promoter
3	LOC_Os03g49600	Os3bglu7 - beta-glucosidase, exo-beta-glucanse, expressed	gene	Os3bglu7 - beta-glucosidase, exo-beta-glucanse, expressed	chr3	28233339	28238401	-	CDS,five_prime_UTR,three_prime_UTR,promoter
3	LOC_Os01g43330	extra-large G-protein-related, putative, expressed	gene	extra-large G-protein-related, putative, expressed	chr1	24761586	24767213	-	CDS,three_prime_UTR
3	LOC_Os11g13870	plant-specific domain TIGR01627 family protein, expressed	gene	plant-specific domain TIGR01627 family protein, expressed	chr11	7646791	7648146	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g06980	histone deacetylase, putative, expressed	gene	histone deacetylase, putative, expressed	chr7	3434934	3443792	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g07580	OsNucAP1 - Putative Nucleoporin Autopeptidase homologue, expressed	gene	OsNucAP1 - Putative Nucleoporin Autopeptidase homologue, expressed	chr3	3858381	3863721	+	CDS,three_prime_UTR,promoter
3	LOC_Os11g28990	TBC domain containing protein, expressed	gene	TBC domain containing protein, expressed	chr11	16309755	16315136	+	CDS,three_prime_UTR
3	LOC_Os10g41340	palmitoyl-protein thioesterase 1 precursor, putative, expressed	gene	palmitoyl-protein thioesterase 1 precursor, putative, expressed	chr10	22144880	22150790	+	CDS
3	LOC_Os08g37595	expressed protein	gene	expressed protein	chr8	23816264	23817258	+	three_prime_UTR,downstream
3	LOC_Os11g18044	peptide transporter PTR2, putative, expressed	gene	peptide transporter PTR2, putative, expressed	chr11	10127922	10138581	+	CDS,three_prime_UTR
3	LOC_Os10g28630	homocysteine S-methyltransferase protein, putative, expressed	gene	homocysteine S-methyltransferase protein, putative, expressed	chr10	14850689	14853800	+	CDS,three_prime_UTR
3	LOC_Os12g21789	expressed protein	gene	expressed protein	chr12	12261991	12265627	-	CDS
3	LOC_Os01g01600	ethylene-responsive protein related, putative, expressed	gene	ethylene-responsive protein related, putative, expressed	chr1	302103	305800	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g01790	expressed protein	gene	expressed protein	chr2	432960	436158	-	three_prime_UTR,promoter
3	LOC_Os05g39374	expressed protein	gene	expressed protein	chr5	23034165	23035283	+	three_prime_UTR,downstream
3	LOC_Os05g01200	exonuclease, putative, expressed	gene	exonuclease, putative, expressed	chr5	148284	149345	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os12g28270	amidohydrolase, putative, expressed	gene	amidohydrolase, putative, expressed	chr12	16699510	16706874	-	CDS,three_prime_UTR
3	LOC_Os01g73644	expressed protein	gene	expressed protein	chr1	42662488	42665169	-	CDS,promoter
3	LOC_Os12g13110	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr12	7286621	7289146	-	CDS,promoter
3	LOC_Os05g33510	peptide methionine sulfoxide reductase msrB, putative, expressed	gene	peptide methionine sulfoxide reductase msrB, putative, expressed	chr5	19619216	19622083	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g14980	hypothetical protein	gene	hypothetical protein	chr5	8499821	8504593	+	five_prime_UTR,CDS,promoter
3	LOC_Os05g48510	phenylalanyl-tRNA synthetase beta chain, putative, expressed	gene	phenylalanyl-tRNA synthetase beta chain, putative, expressed	chr5	27738304	27745389	+	CDS
3	LOC_Os03g14250	plant protein of unknown function DUF869 domain containing protein, expressed	gene	plant protein of unknown function DUF869 domain containing protein, expressed	chr3	7739807	7748307	+	CDS
3	LOC_Os02g11930	receptor-like protein kinase precursor, putative, expressed	gene	receptor-like protein kinase precursor, putative, expressed	chr2	6183112	6187830	+	CDS
3	LOC_Os02g57630	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	gene	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	chr2	35287542	35290688	+	CDS,three_prime_UTR
3	LOC_Os02g38240	rhodanese family protein, putative, expressed	gene	rhodanese family protein, putative, expressed	chr2	23121031	23124050	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g08360	RNA recognition motif, putative, expressed	gene	RNA recognition motif, putative, expressed	chr2	4440181	4448765	+	CDS
3	LOC_Os05g04330	DNA methyltransferase protein, putative, expressed	gene	DNA methyltransferase protein, putative, expressed	chr5	1965578	1974870	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g43930	START domain containing protein, expressed	gene	START domain containing protein, expressed	chr3	24649879	24655729	-	CDS
3	LOC_Os03g17540	TBC domain containing protein, expressed	gene	TBC domain containing protein, expressed	chr3	9742437	9750184	+	three_prime_UTR,CDS
3	LOC_Os07g38380	transmembrane protein 49, putative, expressed	gene	transmembrane protein 49, putative, expressed	chr7	23068687	23073586	-	CDS
3	LOC_Os01g03490	heavy-metal-associated domain-containing protein, putative, expressed	gene	heavy-metal-associated domain-containing protein, putative, expressed	chr1	1403155	1406187	+	three_prime_UTR,promoter,downstream
3	LOC_Os02g53450	expressed protein	gene	expressed protein	chr2	32694564	32698785	+	five_prime_UTR
3	LOC_Os08g13630	expressed protein	gene	expressed protein	chr8	8103906	8106547	+	three_prime_UTR,downstream
3	LOC_Os09g12540	chlorophyll A-B binding protein, putative, expressed	gene	chlorophyll A-B binding protein, putative, expressed	chr9	7184218	7187146	+	CDS,three_prime_UTR
3	LOC_Os02g27769	40S ribosomal protein S27, putative, expressed	gene	40S ribosomal protein S27, putative, expressed	chr2	16439802	16441525	+	three_prime_UTR,downstream
3	LOC_Os03g48850	valyl-tRNA synthetase, putative, expressed	gene	valyl-tRNA synthetase, putative, expressed	chr3	27819920	27828226	+	CDS,three_prime_UTR,promoter
3	LOC_Os02g17190	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr2	9848197	9852415	+	five_prime_UTR,CDS
3	LOC_Os06g11130	gibberellin receptor GID1L2, putative, expressed	gene	gibberellin receptor GID1L2, putative, expressed	chr6	5834563	5836123	+	three_prime_UTR,downstream
3	LOC_Os06g22850	microfibrillar-associated protein 1, putative, expressed	gene	microfibrillar-associated protein 1, putative, expressed	chr6	13326567	13331006	+	three_prime_UTR,downstream
3	LOC_Os01g35040	ZOS1-09 - C2H2 zinc finger protein, expressed	gene	ZOS1-09 - C2H2 zinc finger protein, expressed	chr1	19388786	19391813	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g09510	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr7	5014352	5019213	+	CDS,three_prime_UTR
3	LOC_Os02g35640	SFT2, putative, expressed	gene	SFT2, putative, expressed	chr2	21426356	21429115	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g28050	asparate aminotransferase, putative, expressed	gene	asparate aminotransferase, putative, expressed	chr9	17023570	17027550	+	five_prime_UTR,CDS
3	LOC_Os06g04399	hypersensitive-induced reaction protein 4, putative, expressed	gene	hypersensitive-induced reaction protein 4, putative, expressed	chr6	1879537	1890126	+	five_prime_UTR
3	LOC_Os03g27870	transposon protein, putative, CACTA, En/Spm sub-class	gene	transposon protein, putative, CACTA, En/Spm sub-class	chr3	16007374	16013859	-	CDS,downstream
3	LOC_Os02g16640	proline-rich protein HaeIII subfamily 1 precursor, putative, expressed	gene	proline-rich protein HaeIII subfamily 1 precursor, putative, expressed	chr2	9505790	9509900	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g10130	squalene synthetase, putative, expressed	gene	squalene synthetase, putative, expressed	chr7	5439353	5444911	+	CDS
3	LOC_Os01g22390	WD domain containing protein, putative, expressed	gene	WD domain containing protein, putative, expressed	chr1	12583626	12593735	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g16580	expressed protein	gene	expressed protein	chr3	9137487	9142596	+	CDS
3	LOC_Os03g62610	RNA-binding protein containing a PIN domain, putative, expressed	gene	RNA-binding protein containing a PIN domain, putative, expressed	chr3	35429595	35434499	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g20640	serine/threonine-protein kinase 16, putative, expressed	gene	serine/threonine-protein kinase 16, putative, expressed	chr9	12430006	12433573	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g46290	ethylene-responsive element-binding protein, putative, expressed	gene	ethylene-responsive element-binding protein, putative, expressed	chr4	27241604	27244738	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g21810	histidine kinase, putative, expressed	gene	histidine kinase, putative, expressed	chr10	11120583	11132452	-	three_prime_UTR,CDS
3	LOC_Os12g18130	expressed protein	gene	expressed protein	chr12	10451845	10455961	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os06g04520	expressed protein	gene	expressed protein	chr6	1936858	1947679	+	three_prime_UTR,downstream
3	LOC_Os04g03884	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr4	1770405	1773892	+	three_prime_UTR
3	LOC_Os03g58690	expressed protein	gene	expressed protein	chr3	33414504	33415821	+	CDS,three_prime_UTR
3	LOC_Os01g56360	wax synthase, putative, expressed	gene	wax synthase, putative, expressed	chr1	32474099	32478104	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g44840	glycosyl hydrolase family 3 protein, putative, expressed	gene	glycosyl hydrolase family 3 protein, putative, expressed	chr4	26358099	26361799	-	CDS,promoter
3	LOC_Os11g43590	kelch repeat protein, putative, expressed	gene	kelch repeat protein, putative, expressed	chr11	25828173	25834122	+	CDS,three_prime_UTR
3	LOC_Os08g23680	FHA domain containing protein, putative, expressed	gene	FHA domain containing protein, putative, expressed	chr8	14318542	14325420	-	three_prime_UTR
3	LOC_Os02g26960	expressed protein	gene	expressed protein	chr2	15823380	15827350	+	five_prime_UTR,CDS,downstream
3	LOC_Os01g57350	diacylglycerol kinase, putative, expressed	gene	diacylglycerol kinase, putative, expressed	chr1	33136861	33151549	-	CDS,downstream
3	LOC_Os05g12130	EMB2261, putative, expressed	gene	EMB2261, putative, expressed	chr5	6933799	6936533	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g59510	PHD finger family protein, putative, expressed	gene	PHD finger family protein, putative, expressed	chr4	35197763	35205304	-	three_prime_UTR
3	LOC_Os01g62150	clathrin adaptor complex small chain domain containing protein, expressed	gene	clathrin adaptor complex small chain domain containing protein, expressed	chr1	35980549	35983712	+	three_prime_UTR,CDS,downstream
3	LOC_Os08g43300	UBX domain-containing protein, putative, expressed	gene	UBX domain-containing protein, putative, expressed	chr8	27362391	27368117	-	three_prime_UTR
3	LOC_Os09g34300	Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed	gene	Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed	chr9	20243170	20248047	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g57870	disease resistance protein RPS2, putative, expressed	gene	disease resistance protein RPS2, putative, expressed	chr1	33459210	33462869	-	CDS
3	LOC_Os12g04610	expressed protein	gene	expressed protein	chr12	1948568	1951619	-	CDS,three_prime_UTR
3	LOC_Os05g36290	actin, putative, expressed	gene	actin, putative, expressed	chr5	21438011	21441689	-	CDS
3	LOC_Os01g09460	hexokinase, putative, expressed	gene	hexokinase, putative, expressed	chr1	4819104	4822129	-	CDS
3	LOC_Os03g44630	plastocyanin-like domain containing protein, putative, expressed	gene	plastocyanin-like domain containing protein, putative, expressed	chr3	25128334	25129872	-	three_prime_UTR,promoter
3	LOC_Os09g01360	expressed protein	gene	expressed protein	chr9	285233	296374	-	CDS
3	LOC_Os04g47870	PINHEAD, putative, expressed	gene	PINHEAD, putative, expressed	chr4	28241359	28256477	-	CDS,three_prime_UTR
3	LOC_Os03g20570	tRNA-specific adenosine deaminase 2, putative, expressed	gene	tRNA-specific adenosine deaminase 2, putative, expressed	chr3	11652717	11655335	+	CDS,three_prime_UTR
3	LOC_Os07g27110	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr7	15717343	15722125	+	CDS
3	LOC_Os04g40500	glycosyl hydrolase family 5 protein, putative, expressed	gene	glycosyl hydrolase family 5 protein, putative, expressed	chr4	23874906	23878680	+	CDS,three_prime_UTR,promoter
3	LOC_Os04g48520	ZOS4-12 - C2H2 zinc finger protein, expressed	gene	ZOS4-12 - C2H2 zinc finger protein, expressed	chr4	28739791	28744124	+	CDS
3	LOC_Os08g33390	Regulator of chromosome condensation domain containing protein, expressed	gene	Regulator of chromosome condensation domain containing protein, expressed	chr8	20818175	20822197	-	CDS
3	LOC_Os01g15660	NAD dependent epimerase/dehydratase family protein, putative, expressed	gene	NAD dependent epimerase/dehydratase family protein, putative, expressed	chr1	8808361	8812097	+	CDS
3	LOC_Os06g33340	expressed protein	gene	expressed protein	chr6	19417812	19420896	-	three_prime_UTR,promoter
3	LOC_Os03g37270	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr3	20653453	20659682	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g56100	ribonucleoside-diphosphate reductase large subunit, putative, expressed	gene	ribonucleoside-diphosphate reductase large subunit, putative, expressed	chr2	34322368	34327357	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g48970	expressed protein	gene	expressed protein	chr6	29669437	29672510	+	CDS,three_prime_UTR
3	LOC_Os02g47850	class I glutamine amidotransferase, putative, expressed	gene	class I glutamine amidotransferase, putative, expressed	chr2	29264187	29268775	+	three_prime_UTR,CDS
3	LOC_Os02g23939	expressed protein	gene	expressed protein	chr2	13861109	13864788	+	three_prime_UTR,promoter
3	LOC_Os01g53130	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr1	30523949	30528053	-	CDS,three_prime_UTR
3	LOC_Os06g49480	peptidyl-prolyl cis-trans isomerase, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, putative, expressed	chr6	29972847	29975324	+	CDS,three_prime_UTR
3	LOC_Os11g13860	cyclin-dependent kinase, putative, expressed	gene	cyclin-dependent kinase, putative, expressed	chr11	7639865	7645425	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g50310	E2F-related protein, putative, expressed	gene	E2F-related protein, putative, expressed	chr6	30451440	30455224	-	three_prime_UTR
3	LOC_Os01g64930	expressed protein	gene	expressed protein	chr1	37689257	37692346	+	CDS,three_prime_UTR
3	LOC_Os02g38200	dehydrogenase, putative, expressed	gene	dehydrogenase, putative, expressed	chr2	23101062	23104521	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g42870	Mur ligase family protein, putative, expressed	gene	Mur ligase family protein, putative, expressed	chr12	26602092	26606944	-	CDS,three_prime_UTR
3	LOC_Os03g20580	expressed protein	gene	expressed protein	chr3	11659118	11662975	-	CDS,promoter
3	LOC_Os05g49390	hypothetical protein	gene	hypothetical protein	chr5	28257520	28263252	-	CDS,promoter
3	LOC_Os03g24920	ubiquitin family protein, putative, expressed	gene	ubiquitin family protein, putative, expressed	chr3	14195918	14196264	-	CDS,promoter
3	LOC_Os12g05050	stem-specific protein TSJT1, putative, expressed	gene	stem-specific protein TSJT1, putative, expressed	chr12	2214861	2218490	-	CDS,three_prime_UTR
3	LOC_Os01g67970	ZOS1-20 - C2H2 zinc finger protein, expressed	gene	ZOS1-20 - C2H2 zinc finger protein, expressed	chr1	39492130	39499002	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g47430	protein of unknown function DUF1296 domain containing protein, expressed	gene	protein of unknown function DUF1296 domain containing protein, expressed	chr1	27101075	27108972	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g51880	amine oxidase, putative, expressed	gene	amine oxidase, putative, expressed	chr2	31767472	31770552	-	three_prime_UTR,promoter
3	LOC_Os04g41950	calcium-binding mitochondrial protein anon-60Da, putative, expressed	gene	calcium-binding mitochondrial protein anon-60Da, putative, expressed	chr4	24661764	24668800	-	CDS
3	LOC_Os02g47000	expressed protein	gene	expressed protein	chr2	28688819	28690584	-	three_prime_UTR,promoter
3	LOC_Os05g48450	aminotransferase domain containing protein, putative, expressed	gene	aminotransferase domain containing protein, putative, expressed	chr5	27716140	27722189	+	CDS
3	LOC_Os12g42180	ribosomal protein, putative, expressed	gene	ribosomal protein, putative, expressed	chr12	26105879	26108174	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g37210	expressed protein	gene	expressed protein	chr1	20782310	20785611	-	CDS
3	LOC_Os09g36440	transcription initiation factor IIB, putative, expressed	gene	transcription initiation factor IIB, putative, expressed	chr9	21028485	21031541	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g18980	kinesin motor domain containing protein, expressed	gene	kinesin motor domain containing protein, expressed	chr3	10628977	10634695	-	CDS,promoter
3	LOC_Os08g40150	AT hook motif domain containing protein, expressed	gene	AT hook motif domain containing protein, expressed	chr8	25402188	25406389	-	CDS,promoter
3	LOC_Os11g06180	nodulation-signaling pathway 2 protein, putative	gene	nodulation-signaling pathway 2 protein, putative	chr11	2946066	2948127	+	CDS,promoter,downstream
3	LOC_Os10g28665	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr10	14883789	14888673	-	three_prime_UTR,promoter
3	LOC_Os02g32290	expressed protein	gene	expressed protein	chr2	19061411	19066480	+	CDS,three_prime_UTR
3	LOC_Os08g17370	transmembrane 9 superfamily member, putative, expressed	gene	transmembrane 9 superfamily member, putative, expressed	chr8	10620753	10624452	-	CDS,three_prime_UTR
3	LOC_Os06g05100	transketolase, putative, expressed	gene	transketolase, putative, expressed	chr6	2249560	2255640	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g13520	auxin response factor 1, putative, expressed	gene	auxin response factor 1, putative, expressed	chr1	7545885	7550996	+	CDS,three_prime_UTR
3	LOC_Os03g12414	cyclin, putative, expressed	gene	cyclin, putative, expressed	chr3	6555387	6561025	-	CDS,downstream
3	LOC_Os01g09580	CAMK_CAMK_like_Aur_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like_Aur_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr1	4908890	4913370	-	three_prime_UTR,promoter
3	LOC_Os02g55010	expressed protein	gene	expressed protein	chr2	33694545	33700466	+	CDS
3	LOC_Os06g41390	N-terminal asparagine amidohydrolase, putative, expressed	gene	N-terminal asparagine amidohydrolase, putative, expressed	chr6	24813007	24816725	-	CDS,three_prime_UTR
3	LOC_Os02g40090	transporter-related, putative, expressed	gene	transporter-related, putative, expressed	chr2	24264365	24267806	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g38940	expressed protein	gene	expressed protein	chr3	21629575	21632565	-	three_prime_UTR
3	LOC_Os06g41590	YIF1B, putative, expressed	gene	YIF1B, putative, expressed	chr6	24916133	24919291	-	CDS,three_prime_UTR
3	LOC_Os02g26440	prefoldin subunit, putative, expressed	gene	prefoldin subunit, putative, expressed	chr2	15518249	15522294	+	CDS,three_prime_UTR
3	LOC_Os01g05460	hypothetical protein	gene	hypothetical protein	chr1	2574583	2577210	-	CDS,downstream
3	LOC_Os02g07060	tubulin/FtsZ domain containing protein, putative, expressed	gene	tubulin/FtsZ domain containing protein, putative, expressed	chr2	3619835	3622859	+	three_prime_UTR,downstream
3	LOC_Os03g22740	nucleolar protein NOP5-1, putative	gene	nucleolar protein NOP5-1, putative	chr3	13132524	13135898	-	CDS
3	LOC_Os02g06280	receptor-like protein kinase 2 precursor, putative	gene	receptor-like protein kinase 2 precursor, putative	chr2	3136181	3137963	-	CDS,promoter
3	LOC_Os04g35090	40S ribosomal protein S10, putative, expressed	gene	40S ribosomal protein S10, putative, expressed	chr4	21157668	21160259	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g16350	enoyl-CoA hydratase/isomerase family protein, putative, expressed	gene	enoyl-CoA hydratase/isomerase family protein, putative, expressed	chr12	9348264	9362993	+	CDS,three_prime_UTR
3	LOC_Os06g20430	BPI/LBP family protein At3g20270 precursor, putative, expressed	gene	BPI/LBP family protein At3g20270 precursor, putative, expressed	chr6	11736121	11740016	-	CDS,three_prime_UTR
3	LOC_Os12g37640	xaa-Pro aminopeptidase, putative, expressed	gene	xaa-Pro aminopeptidase, putative, expressed	chr12	23072581	23077992	+	CDS,three_prime_UTR,promoter
3	LOC_Os06g21620	expressed protein	gene	expressed protein	chr6	12470710	12475483	-	CDS,three_prime_UTR
3	LOC_Os06g44200	ZOS6-06 - C2H2 zinc finger protein, expressed	gene	ZOS6-06 - C2H2 zinc finger protein, expressed	chr6	26659941	26663598	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os08g02460	expressed protein	gene	expressed protein	chr8	983054	986939	-	CDS
3	LOC_Os03g14450	enolase, putative, expressed	gene	enolase, putative, expressed	chr3	7846930	7851761	-	CDS
3	LOC_Os09g20990	trehalose-6-phosphate synthase, putative, expressed	gene	trehalose-6-phosphate synthase, putative, expressed	chr9	12643224	12649073	-	CDS,three_prime_UTR
3	LOC_Os12g07370	csAtPR5, putative, expressed	gene	csAtPR5, putative, expressed	chr12	3626679	3631008	-	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g15720	expressed protein	gene	expressed protein	chr5	8879048	8886498	+	CDS
3	LOC_Os02g05490	expressed protein	gene	expressed protein	chr2	2656063	2659126	+	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g15720	expressed protein	gene	expressed protein	chr3	8666989	8670076	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g40830	pumilio domain-containing protein PPD1, putative, expressed	gene	pumilio domain-containing protein PPD1, putative, expressed	chr8	25826329	25841880	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g61420	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr1	35512475	35516503	-	three_prime_UTR,promoter,downstream
3	LOC_Os06g45660	histidine triad family protein, putative, expressed	gene	histidine triad family protein, putative, expressed	chr6	27655849	27658014	+	three_prime_UTR,downstream
3	LOC_Os04g55940	sodium/calcium exchanger protein, putative, expressed	gene	sodium/calcium exchanger protein, putative, expressed	chr4	33129520	33134265	+	CDS,three_prime_UTR
3	LOC_Os01g35830	expressed protein	gene	expressed protein	chr1	19844603	19847307	-	CDS,three_prime_UTR
3	LOC_Os02g51830	tRNA synthetase class II core domain containing protein, expressed	gene	tRNA synthetase class II core domain containing protein, expressed	chr2	31742899	31748587	-	CDS,three_prime_UTR
3	LOC_Os08g33740	CSLA11 - cellulose synthase-like family A, expressed	gene	CSLA11 - cellulose synthase-like family A, expressed	chr8	21075426	21083938	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g04940	splicing factor, putative, expressed	gene	splicing factor, putative, expressed	chr12	2127574	2134180	-	CDS
3	LOC_Os05g07640	expressed protein	gene	expressed protein	chr5	4102562	4105886	+	CDS,downstream
3	LOC_Os08g09670	F-box/LRR-repeat protein 22, putative, expressed	gene	F-box/LRR-repeat protein 22, putative, expressed	chr8	5583231	5586028	-	CDS,three_prime_UTR
3	LOC_Os03g63920	KAP-2, putative, expressed	gene	KAP-2, putative, expressed	chr3	36106946	36112647	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g08390	expressed protein	gene	expressed protein	chr3	4286337	4290866	+	CDS
3	LOC_Os05g09410	histidine-containing phosphotransfer protein 4, putative, expressed	gene	histidine-containing phosphotransfer protein 4, putative, expressed	chr5	5278176	5280616	-	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os02g37950	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr2	22928235	22934458	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g18090	expressed protein	gene	expressed protein	chr2	10509141	10512246	-	three_prime_UTR
3	LOC_Os04g51370	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr4	30231323	30239025	-	CDS,promoter
3	LOC_Os12g01200	senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed	gene	senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed	chr12	111744	119807	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g37710	PsbP, putative, expressed	gene	PsbP, putative, expressed	chr12	23114738	23124129	+	CDS,three_prime_UTR,five_prime_UTR,downstream
3	LOC_Os06g44030	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr6	26528301	26537144	+	CDS,three_prime_UTR
3	LOC_Os08g15204	thioredoxin domain-containing protein 9, putative, expressed	gene	thioredoxin domain-containing protein 9, putative, expressed	chr8	9190625	9200402	+	CDS,three_prime_UTR
3	LOC_Os02g25900	pollen signalling protein with adenylyl cyclase activity, putative, expressed	gene	pollen signalling protein with adenylyl cyclase activity, putative, expressed	chr2	15186384	15190859	+	CDS
3	LOC_Os05g28200	prenyltransferase, putative, expressed	gene	prenyltransferase, putative, expressed	chr5	16454551	16460330	+	CDS
3	LOC_Os06g19260	cadmium tolerance factor, putative, expressed	gene	cadmium tolerance factor, putative, expressed	chr6	10956734	10959701	-	CDS,downstream
3	LOC_Os08g02400	40S ribosomal protein S13, putative, expressed	gene	40S ribosomal protein S13, putative, expressed	chr8	955311	957683	-	three_prime_UTR,promoter
3	LOC_Os03g61260	ribosomal L18p/L5e family protein, putative, expressed	gene	ribosomal L18p/L5e family protein, putative, expressed	chr3	34778343	34780384	+	CDS,three_prime_UTR
3	LOC_Os07g19560	TATA-binding protein-associated factor 2N, putative, expressed	gene	TATA-binding protein-associated factor 2N, putative, expressed	chr7	11591285	11595871	-	CDS,three_prime_UTR
3	LOC_Os05g45280	protein of unknown function DUF502 domain containing protein, expressed	gene	protein of unknown function DUF502 domain containing protein, expressed	chr5	26216868	26220215	-	CDS,promoter
3	LOC_Os08g44330	peptidylprolyl isomerase domain and WD repeat-containing protein 1, putative, expressed	gene	peptidylprolyl isomerase domain and WD repeat-containing protein 1, putative, expressed	chr8	27890523	27896117	+	CDS,three_prime_UTR
3	LOC_Os07g23810	expressed protein	gene	expressed protein	chr7	13442485	13445046	+	three_prime_UTR,downstream
3	LOC_Os01g36610	conserved hypothetical protein	gene	conserved hypothetical protein	chr1	20313271	20315061	+	CDS,downstream
3	LOC_Os01g59110	indole-3-acetate beta-glucosyltransferase, putative, expressed	gene	indole-3-acetate beta-glucosyltransferase, putative, expressed	chr1	34145117	34148149	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g10030	KH domain-containing protein, putative, expressed	gene	KH domain-containing protein, putative, expressed	chr8	5810118	5815031	-	three_prime_UTR,promoter
3	LOC_Os10g16640	expressed protein	gene	expressed protein	chr10	8224062	8237889	-	CDS,three_prime_UTR
3	LOC_Os04g41470	expressed protein	gene	expressed protein	chr4	24396377	24403598	+	CDS,three_prime_UTR
3	LOC_Os12g42100	phosphonate metabolism protein-related, putative	gene	phosphonate metabolism protein-related, putative	chr12	26070476	26075228	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g22190	expressed protein	gene	expressed protein	chr3	12717675	12724973	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g09630	3-oxoacyl-synthase, putative, expressed	gene	3-oxoacyl-synthase, putative, expressed	chr6	4896180	4899566	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g12900	squalene monooxygenase, putative, expressed	gene	squalene monooxygenase, putative, expressed	chr3	6949463	6956388	-	CDS,three_prime_UTR,downstream
3	LOC_Os05g08980	expressed protein	gene	expressed protein	chr5	4971537	4976492	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os08g08030	double-strand break repair protein MRE11, putative	gene	double-strand break repair protein MRE11, putative	chr8	4550513	4556533	-	CDS,promoter
3	LOC_Os02g06592	SNF2 family N-terminal domain containing protein, expressed	gene	SNF2 family N-terminal domain containing protein, expressed	chr2	3313825	3318383	+	CDS
3	LOC_Os05g50450	hypothetical protein	gene	hypothetical protein	chr5	28857323	28858681	-	CDS,promoter
3	LOC_Os03g40540	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr3	22536830	22541009	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g42370	expressed protein	gene	expressed protein	chr4	24882495	24890200	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g11414	sodium/calcium exchanger protein, putative, expressed	gene	sodium/calcium exchanger protein, putative, expressed	chr1	6133202	6138189	+	CDS,five_prime_UTR
3	LOC_Os06g51270	1,3-beta-glucan synthase component domain containing protein, expressed	gene	1,3-beta-glucan synthase component domain containing protein, expressed	chr6	31032383	31047514	-	CDS
3	LOC_Os01g19380	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr1	10963976	10967049	+	CDS,downstream
3	LOC_Os12g29980	growth regulating factor protein, putative, expressed	gene	growth regulating factor protein, putative, expressed	chr12	17887062	17890989	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g46790	4-alpha-glucanotransferase, putative, expressed	gene	4-alpha-glucanotransferase, putative, expressed	chr7	27959447	27967024	+	CDS
3	LOC_Os06g14040	ThiF family domain containing protein, putative, expressed	gene	ThiF family domain containing protein, putative, expressed	chr6	7824469	7828697	+	CDS,three_prime_UTR
3	LOC_Os02g15870	molybdenum cofactor biosynthesis protein 1, putative, expressed	gene	molybdenum cofactor biosynthesis protein 1, putative, expressed	chr2	8976763	8981138	-	three_prime_UTR,CDS
3	LOC_Os02g42530	expressed protein	gene	expressed protein	chr2	25563305	25569039	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g11070	expressed protein	gene	expressed protein	chr6	5806270	5810212	+	CDS,three_prime_UTR
3	LOC_Os02g39730	expressed protein	gene	expressed protein	chr2	23992210	23994932	-	three_prime_UTR,CDS,promoter
3	LOC_Os01g09246	glycine-rich protein, putative, expressed	gene	glycine-rich protein, putative, expressed	chr1	4672400	4683865	+	CDS,three_prime_UTR
3	LOC_Os10g28020	OsPOP21 - Putative Prolyl Oligopeptidase homologue, expressed	gene	OsPOP21 - Putative Prolyl Oligopeptidase homologue, expressed	chr10	14461609	14471990	+	CDS,three_prime_UTR
3	LOC_Os06g09090	glutamate receptor 2.8 precursor, putative, expressed	gene	glutamate receptor 2.8 precursor, putative, expressed	chr6	4570089	4573928	-	CDS,three_prime_UTR
3	LOC_Os12g33289	hypothetical protein	gene	hypothetical protein	chr12	20105944	20109204	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g05110	pyruvate kinase, putative, expressed	gene	pyruvate kinase, putative, expressed	chr11	2235068	2239462	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os10g25130	aminotransferase, classes I and II, domain containing protein, expressed	gene	aminotransferase, classes I and II, domain containing protein, expressed	chr10	12896632	12903065	+	CDS
3	LOC_Os12g09739	pollen signalling protein with adenylyl cyclase activity, putative, expressed	gene	pollen signalling protein with adenylyl cyclase activity, putative, expressed	chr12	5136593	5148479	-	CDS,three_prime_UTR
3	LOC_Os07g44680	hypothetical protein	gene	hypothetical protein	chr7	26661133	26661780	-	CDS,promoter
3	LOC_Os08g10320	SHR5-receptor-like kinase, putative, expressed	gene	SHR5-receptor-like kinase, putative, expressed	chr8	6031176	6038186	+	CDS
3	LOC_Os03g06730	plant protein of unknown function domain containing protein, expressed	gene	plant protein of unknown function domain containing protein, expressed	chr3	3423900	3425958	+	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os02g51450	mTERF family protein, expressed	gene	mTERF family protein, expressed	chr2	31515114	31517201	+	three_prime_UTR
3	LOC_Os03g64110	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr3	36221625	36225856	+	CDS
3	LOC_Os03g14280	ATP-dependent Clp protease ATP-binding subunit, putative, expressed	gene	ATP-dependent Clp protease ATP-binding subunit, putative, expressed	chr3	7772660	7778803	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g02590	DUF1336 domain containing protein, expressed	gene	DUF1336 domain containing protein, expressed	chr6	912780	920283	+	CDS
3	LOC_Os03g36790	tobamovirus multiplication protein, putative, expressed	gene	tobamovirus multiplication protein, putative, expressed	chr3	20419260	20424839	-	CDS,three_prime_UTR
3	LOC_Os08g36150	activator of 90 kDa heat shock protein ATPase homolog, putative, expressed	gene	activator of 90 kDa heat shock protein ATPase homolog, putative, expressed	chr8	22774388	22778553	-	three_prime_UTR,CDS
3	LOC_Os04g11830	TCP family transcription factor, putative, expressed	gene	TCP family transcription factor, putative, expressed	chr4	6486345	6491068	-	three_prime_UTR
3	LOC_Os12g01922	WD domain and HEAT domain containing protein, putative, expressed	gene	WD domain and HEAT domain containing protein, putative, expressed	chr12	540268	549495	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g17900	armadillo/beta-catenin repeat family protein, putative, expressed	gene	armadillo/beta-catenin repeat family protein, putative, expressed	chr12	10278316	10284123	-	CDS,three_prime_UTR
3	LOC_Os06g46340	glycosyl hydrolase, family 31, putative, expressed	gene	glycosyl hydrolase, family 31, putative, expressed	chr6	28099803	28105085	+	CDS
3	LOC_Os06g48534	GATA transcription factor 25, putative, expressed	gene	GATA transcription factor 25, putative, expressed	chr6	29364983	29369368	-	CDS
3	LOC_Os12g07350	tRNA nucleotidyltransferase/polyA polymerase family protein, putative, expressed	gene	tRNA nucleotidyltransferase/polyA polymerase family protein, putative, expressed	chr12	3618350	3625515	+	CDS,three_prime_UTR
3	LOC_Os07g31690	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr7	18813667	18817142	+	CDS
3	LOC_Os06g11600	growth regulator related protein, putative, expressed	gene	growth regulator related protein, putative, expressed	chr6	6145722	6150202	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g34690	T-complex protein, putative, expressed	gene	T-complex protein, putative, expressed	chr6	20157644	20164627	+	CDS
3	LOC_Os08g41300	60S ribosomal protein L32, putative, expressed	gene	60S ribosomal protein L32, putative, expressed	chr8	26088196	26090231	+	three_prime_UTR,downstream
3	LOC_Os04g53050	disease resistance RPP13-like protein 1, putative	gene	disease resistance RPP13-like protein 1, putative	chr4	31415016	31419096	+	CDS
3	LOC_Os08g34760	expressed protein	gene	expressed protein	chr8	21846176	21853398	-	CDS
3	LOC_Os03g18580	40S ribosomal protein S7, putative	gene	40S ribosomal protein S7, putative	chr3	10397033	10398686	+	CDS,downstream
3	LOC_Os03g53490	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr3	30669674	30672129	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g42740	cytochrome b5-like Heme/Steroid binding domain containing protein, expressed	gene	cytochrome b5-like Heme/Steroid binding domain containing protein, expressed	chr2	25690955	25693276	-	three_prime_UTR,promoter
3	LOC_Os10g31910	pectate lyase precursor, putative, expressed	gene	pectate lyase precursor, putative, expressed	chr10	16684337	16689651	-	three_prime_UTR,promoter
3	LOC_Os08g45010	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr8	28247705	28251295	-	CDS
3	LOC_Os03g59080	AMP-binding enzyme, putative, expressed	gene	AMP-binding enzyme, putative, expressed	chr3	33624793	33629717	-	CDS,three_prime_UTR
3	LOC_Os09g20020	NBS-LRR resistance-like protein B8, putative, expressed	gene	NBS-LRR resistance-like protein B8, putative, expressed	chr9	11988747	11992427	-	CDS,promoter
3	LOC_Os02g47440	syntaxin, putative, expressed	gene	syntaxin, putative, expressed	chr2	28961707	28967237	-	CDS
3	LOC_Os06g46120	expressed protein	gene	expressed protein	chr6	27952692	27955185	-	CDS,promoter
3	LOC_Os04g35060	nicotinate phosphoribosyltransferase family domain containing protein, expressed	gene	nicotinate phosphoribosyltransferase family domain containing protein, expressed	chr4	21138484	21146301	+	CDS
3	LOC_Os01g32300	expressed protein	gene	expressed protein	chr1	17707745	17712426	+	CDS,three_prime_UTR
3	LOC_Os07g47950	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	28636855	28641784	+	CDS
3	LOC_Os11g03650	mla1, putative, expressed	gene	mla1, putative, expressed	chr11	1415437	1420233	-	CDS
3	LOC_Os04g44540	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr4	26183561	26186705	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g64350	expressed protein	gene	expressed protein	chr1	37352341	37355152	-	three_prime_UTR
3	LOC_Os04g12499	amino acid transporter protein, putative, expressed	gene	amino acid transporter protein, putative, expressed	chr4	6908512	6911491	-	CDS,downstream
3	LOC_Os05g05700	cullin, putative, expressed	gene	cullin, putative, expressed	chr5	2834112	2840824	-	CDS
3	LOC_Os07g07646	expressed protein	gene	expressed protein	chr7	3829512	3832280	+	CDS
3	LOC_Os01g40590	tyrosine protein kinase domain containing protein, putative, expressed	gene	tyrosine protein kinase domain containing protein, putative, expressed	chr1	22917409	22922826	-	CDS,three_prime_UTR
3	LOC_Os11g32160	expressed protein	gene	expressed protein	chr11	18515583	18521610	+	CDS
3	LOC_Os08g25460	transcription initiation factor, putative, expressed	gene	transcription initiation factor, putative, expressed	chr8	15491524	15499136	+	CDS
3	LOC_Os09g28560	protein phosphotase protein, putative, expressed	gene	protein phosphotase protein, putative, expressed	chr9	17365406	17370402	-	CDS
3	LOC_Os03g31310	circadian clock coupling factor-related, putative, expressed	gene	circadian clock coupling factor-related, putative, expressed	chr3	17838714	17843145	-	three_prime_UTR,promoter
3	LOC_Os03g51230	SNF2 family N-terminal domain containing protein, expressed	gene	SNF2 family N-terminal domain containing protein, expressed	chr3	29298460	29304766	+	CDS
3	LOC_Os04g57680	expressed protein	gene	expressed protein	chr4	34153342	34156807	+	CDS,three_prime_UTR
3	LOC_Os05g41172	histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed	gene	histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed	chr5	24052999	24059086	-	three_prime_UTR,downstream
3	LOC_Os02g02860	glutamyl-tRNA synthetase, putative, expressed	gene	glutamyl-tRNA synthetase, putative, expressed	chr2	1090312	1095993	-	CDS,three_prime_UTR
3	LOC_Os05g07690	thioredoxin, putative, expressed	gene	thioredoxin, putative, expressed	chr5	4136080	4139317	-	CDS,three_prime_UTR
3	LOC_Os05g23940	transcription initiation factor IIB, putative, expressed	gene	transcription initiation factor IIB, putative, expressed	chr5	13714802	13724476	+	CDS
3	LOC_Os06g05870	dual specificity protein phosphatase, putative, expressed	gene	dual specificity protein phosphatase, putative, expressed	chr6	2677431	2687555	+	CDS,three_prime_UTR
3	LOC_Os06g45670	glycine cleavage system H protein, putative, expressed	gene	glycine cleavage system H protein, putative, expressed	chr6	27658072	27660179	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g17504	retrotransposon protein, putative, Ty1-copia subclass, expressed	gene	retrotransposon protein, putative, Ty1-copia subclass, expressed	chr11	9749536	9754448	+	CDS
3	LOC_Os05g18660	OsFBDUF24 - F-box and DUF domain containing protein, expressed	gene	OsFBDUF24 - F-box and DUF domain containing protein, expressed	chr5	10804067	10807112	-	CDS,three_prime_UTR
3	LOC_Os06g40415	hypothetical protein	gene	hypothetical protein	chr6	24068345	24071451	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g07670	URED, putative, expressed	gene	URED, putative, expressed	chr2	3992037	3995073	-	CDS,three_prime_UTR
3	LOC_Os01g61780	vacuolar ATP synthase 98 kDa subunit, putative, expressed	gene	vacuolar ATP synthase 98 kDa subunit, putative, expressed	chr1	35731622	35742643	+	CDS,three_prime_UTR
3	LOC_Os02g12440	receptor kinase, putative, expressed	gene	receptor kinase, putative, expressed	chr2	6487390	6490577	+	CDS,downstream
3	LOC_Os07g46220	SNARE associated Golgi protein, putative, expressed	gene	SNARE associated Golgi protein, putative, expressed	chr7	27578356	27583291	+	CDS,three_prime_UTR
3	LOC_Os04g02280	OsFBX114 - F-box domain containing protein, expressed	gene	OsFBX114 - F-box domain containing protein, expressed	chr4	792538	798310	-	five_prime_UTR,CDS
3	LOC_Os07g33370	IQ calmodulin-binding motif family protein, expressed	gene	IQ calmodulin-binding motif family protein, expressed	chr7	19942783	19950062	-	CDS,promoter
3	LOC_Os07g40270	frigida, putative, expressed	gene	frigida, putative, expressed	chr7	24136914	24142091	-	CDS
3	LOC_Os04g08270	pullulanase precursor, putative, expressed	gene	pullulanase precursor, putative, expressed	chr4	4403961	4414498	+	CDS,promoter
3	LOC_Os11g12300	NBS-LRR disease resistance protein, putative	gene	NBS-LRR disease resistance protein, putative	chr11	6867782	6868801	+	CDS,promoter,downstream
3	LOC_Os07g38220	expressed protein	gene	expressed protein	chr7	22920000	22921485	+	three_prime_UTR,downstream
3	LOC_Os04g31804	OsMADS64 - MADS-box family gene with M-alpha type-box, expressed	gene	OsMADS64 - MADS-box family gene with M-alpha type-box, expressed	chr4	18870742	18886692	+	CDS,downstream
3	LOC_Os07g43730	transcription elongation factor 1, putative, expressed	gene	transcription elongation factor 1, putative, expressed	chr7	26168957	26171562	+	three_prime_UTR
3	LOC_Os05g33460	mTERF domain containing protein, expressed	gene	mTERF domain containing protein, expressed	chr5	19594331	19597421	-	three_prime_UTR
3	LOC_Os06g12790	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr6	6989940	6993557	+	CDS,three_prime_UTR
3	LOC_Os10g24810	cytidylyltransferase domain containing protein, expressed	gene	cytidylyltransferase domain containing protein, expressed	chr10	12684213	12688401	-	CDS
3	LOC_Os08g02000	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr8	635702	642713	+	CDS,promoter,downstream
3	LOC_Os01g57073	insulin-degrading enzyme, putative, expressed	gene	insulin-degrading enzyme, putative, expressed	chr1	32964261	32976363	+	CDS
3	LOC_Os07g41230	esterase, putative, expressed	gene	esterase, putative, expressed	chr7	24698501	24702800	+	CDS
3	LOC_Os10g42754	expressed protein	gene	expressed protein	chr10	22994944	22998227	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os07g35060	OsFBX238 - F-box domain containing protein, expressed	gene	OsFBX238 - F-box domain containing protein, expressed	chr7	21001836	21003754	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g50380	DNA-directed RNA polymerase I subunit RPA12, putative, expressed	gene	DNA-directed RNA polymerase I subunit RPA12, putative, expressed	chr3	28739704	28742009	+	three_prime_UTR,downstream
3	LOC_Os02g53770	tRNA synthetase class I, putative, expressed	gene	tRNA synthetase class I, putative, expressed	chr2	32928275	32939287	+	CDS
3	LOC_Os10g32700	hypersensitive-induced response protein, putative, expressed	gene	hypersensitive-induced response protein, putative, expressed	chr10	17046049	17048660	-	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g26970	expressed protein	gene	expressed protein	chr1	15018780	15022941	-	CDS,three_prime_UTR
3	LOC_Os01g06550	NF-X1-type zinc finger protein, putative, expressed	gene	NF-X1-type zinc finger protein, putative, expressed	chr1	3084406	3089887	-	CDS,three_prime_UTR
3	LOC_Os02g45600	rhoGAP domain containing protein, expressed	gene	rhoGAP domain containing protein, expressed	chr2	27738147	27741383	+	CDS
3	LOC_Os02g05410	splicing factor 3B subunit 1, putative, expressed	gene	splicing factor 3B subunit 1, putative, expressed	chr2	2599189	2604031	-	CDS,three_prime_UTR
3	LOC_Os05g49030	60S ribosomal protein L18a, putative, expressed	gene	60S ribosomal protein L18a, putative, expressed	chr5	28055640	28057850	+	three_prime_UTR
3	LOC_Os12g44180	nodulin, putative, expressed	gene	nodulin, putative, expressed	chr12	27373770	27377633	+	CDS
3	LOC_Os07g39920	formin, putative, expressed	gene	formin, putative, expressed	chr7	23943542	23949470	+	CDS
3	LOC_Os04g37904	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr4	22349244	22355920	-	CDS
3	LOC_Os10g37720	hydrolase, alpha/beta fold family protein, putative, expressed	gene	hydrolase, alpha/beta fold family protein, putative, expressed	chr10	20110170	20114604	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g29810	disease resistant protein, identical, putative, expressed	gene	disease resistant protein, identical, putative, expressed	chr7	17523044	17527687	+	CDS,downstream
3	LOC_Os11g39370	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	gene	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	chr11	22965103	22970677	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g52230	ent-kaurene synthase, chloroplast precursor, putative, expressed	gene	ent-kaurene synthase, chloroplast precursor, putative, expressed	chr4	30841498	30846132	+	CDS
3	LOC_Os06g07770	expressed protein	gene	expressed protein	chr6	3761944	3772096	+	CDS,promoter,downstream
3	LOC_Os05g01510	cytoplasmic membrane protein, putative, expressed	gene	cytoplasmic membrane protein, putative, expressed	chr5	299378	303764	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g02030	thiamine pyrophosphate enzyme, N-terminal TPP binding domain containing protein, expressed	gene	thiamine pyrophosphate enzyme, N-terminal TPP binding domain containing protein, expressed	chr7	611503	618412	+	CDS
3	LOC_Os08g01770	adenylate kinase, putative, expressed	gene	adenylate kinase, putative, expressed	chr8	460437	463815	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g38320	AGC_PVPK_like_kin82y.14 - ACG kinases include homologs to PKA, PKG and PKC, expressed	gene	AGC_PVPK_like_kin82y.14 - ACG kinases include homologs to PKA, PKG and PKC, expressed	chr8	24271295	24274802	+	CDS
3	LOC_Os07g20580	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr7	11886129	11893428	-	CDS,three_prime_UTR
3	LOC_Os03g21980	tRNA pseudouridine synthase family protein, putative, expressed	gene	tRNA pseudouridine synthase family protein, putative, expressed	chr3	12590389	12594354	-	CDS
3	LOC_Os05g28940	GTP-binding protein, putative, expressed	gene	GTP-binding protein, putative, expressed	chr5	16905706	16911830	+	CDS,three_prime_UTR
3	LOC_Os08g37750	cellulase, putative, expressed	gene	cellulase, putative, expressed	chr8	23910868	23914146	+	CDS
3	LOC_Os10g36490	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr10	19445435	19453915	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g55090	expressed protein	gene	expressed protein	chr2	33732722	33736381	-	CDS,three_prime_UTR
3	LOC_Os02g26160	receptor lectin kinase like protein, putative, expressed	gene	receptor lectin kinase like protein, putative, expressed	chr2	15357395	15361347	+	three_prime_UTR
3	LOC_Os03g54240	expressed protein	gene	expressed protein	chr3	31087142	31090543	+	three_prime_UTR,downstream
3	LOC_Os05g51510	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr5	29475784	29479374	-	CDS,three_prime_UTR
3	LOC_Os01g37690	sodium/calcium exchanger protein, putative, expressed	gene	sodium/calcium exchanger protein, putative, expressed	chr1	21070325	21075685	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g33360	transmembrane BAX inhibitor motif-containing protein, putative, expressed	gene	transmembrane BAX inhibitor motif-containing protein, putative, expressed	chr5	19525874	19528264	-	CDS,three_prime_UTR
3	LOC_Os05g19030	expressed protein	gene	expressed protein	chr5	11042498	11045624	+	CDS
3	LOC_Os01g43070	psbP-related thylakoid lumenal protein 4, chloroplast precursor, putative, expressed	gene	psbP-related thylakoid lumenal protein 4, chloroplast precursor, putative, expressed	chr1	24571938	24575249	+	CDS,three_prime_UTR
3	LOC_Os08g21879	expressed protein	gene	expressed protein	chr8	13101093	13104200	+	three_prime_UTR
3	LOC_Os01g56860	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr1	32837479	32841429	-	CDS
3	LOC_Os07g10690	NLI interacting factor-like phosphatase, putative, expressed	gene	NLI interacting factor-like phosphatase, putative, expressed	chr7	5804335	5810942	+	CDS,three_prime_UTR
3	LOC_Os01g43520	neutral ceramidase precursor, putative, expressed	gene	neutral ceramidase precursor, putative, expressed	chr1	24912436	24922970	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g29520	cytochrome b561, putative, expressed	gene	cytochrome b561, putative, expressed	chr8	18096042	18100200	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g42730	mov34/MPN/PAD-1 family protein, expressed	gene	mov34/MPN/PAD-1 family protein, expressed	chr12	26514778	26524013	+	CDS
3	LOC_Os06g36180	amino acid transporter, putative, expressed	gene	amino acid transporter, putative, expressed	chr6	21183903	21191192	+	CDS
3	LOC_Os04g59340	RNA-binding region RNP-1, putative, expressed	gene	RNA-binding region RNP-1, putative, expressed	chr4	35095543	35097573	+	three_prime_UTR
3	LOC_Os01g08200	ubiquitin carboxyl-terminal hydrolase 14, putative, expressed	gene	ubiquitin carboxyl-terminal hydrolase 14, putative, expressed	chr1	3985612	3994398	+	CDS,three_prime_UTR,promoter
3	LOC_Os04g35570	Regulator of chromosome condensation domain containing protein, expressed	gene	Regulator of chromosome condensation domain containing protein, expressed	chr4	21510459	21516356	+	CDS,three_prime_UTR
3	LOC_Os04g33970	2-Cys peroxiredoxin BAS1, chloroplast precursor, putative, expressed	gene	2-Cys peroxiredoxin BAS1, chloroplast precursor, putative, expressed	chr4	20388010	20392951	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g37810	STRUBBELIG-RECEPTOR FAMILY 1 precursor, putative, expressed	gene	STRUBBELIG-RECEPTOR FAMILY 1 precursor, putative, expressed	chr7	22670419	22675756	-	CDS,three_prime_UTR
3	LOC_Os05g37390	G10 protein, putative, expressed	gene	G10 protein, putative, expressed	chr5	21813379	21815897	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g34040	TBC domain containing protein, expressed	gene	TBC domain containing protein, expressed	chr9	20086130	20090112	-	CDS
3	LOC_Os01g62870	oxidoreductase, aldo/keto reductase family protein, putative, expressed	gene	oxidoreductase, aldo/keto reductase family protein, putative, expressed	chr1	36409595	36413567	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g27520	tRNA synthetases class II domain containing protein, expressed	gene	tRNA synthetases class II domain containing protein, expressed	chr1	15355753	15359658	-	CDS,three_prime_UTR
3	LOC_Os05g44570	histidine-containing phosphotransfer protein, putative, expressed	gene	histidine-containing phosphotransfer protein, putative, expressed	chr5	25865405	25872708	-	five_prime_UTR,CDS,downstream
3	LOC_Os04g09350	expressed protein	gene	expressed protein	chr4	4960965	4970808	+	three_prime_UTR
3	LOC_Os06g50920	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr6	30816440	30822887	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g38180	peptidyl-prolyl isomerase, putative, expressed	gene	peptidyl-prolyl isomerase, putative, expressed	chr1	21380839	21388599	+	five_prime_UTR,CDS
3	LOC_Os01g04490	Ser/Thr protein kinase, putative, expressed	gene	Ser/Thr protein kinase, putative, expressed	chr1	1997427	2002305	+	CDS,promoter
3	LOC_Os07g43950	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr7	26264500	26267679	+	CDS
3	LOC_Os09g10054	disease resistance protein RPS2, putative, expressed	gene	disease resistance protein RPS2, putative, expressed	chr9	5470800	5490310	-	five_prime_UTR,CDS
3	LOC_Os03g38440	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr3	21333324	21336358	+	three_prime_UTR,downstream
3	LOC_Os01g13570	phosphoglycerate mutase, putative, expressed	gene	phosphoglycerate mutase, putative, expressed	chr1	7589399	7591760	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g46500	OsFBX21 - F-box domain containing protein, expressed	gene	OsFBX21 - F-box domain containing protein, expressed	chr1	26448007	26451831	+	CDS,downstream
3	LOC_Os09g29930	transcription factor BIM2, putative, expressed	gene	transcription factor BIM2, putative, expressed	chr9	18206612	18214107	+	CDS,three_prime_UTR
3	LOC_Os11g32930	hypothetical protein	gene	hypothetical protein	chr11	18981814	18982506	+	CDS,downstream
3	LOC_Os03g30430	nitrilase-associated protein, putative, expressed	gene	nitrilase-associated protein, putative, expressed	chr3	17345952	17349358	-	CDS,three_prime_UTR
3	LOC_Os09g39440	inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed	gene	inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed	chr9	22677079	22679895	-	CDS
3	LOC_Os04g36070	OsRR1  type-A response regulator, expressed	gene	OsRR1  type-A response regulator, expressed	chr4	21851883	21855731	-	three_prime_UTR,promoter
3	LOC_Os12g43560	zinc finger, putative, expressed	gene	zinc finger, putative, expressed	chr12	26991676	26996384	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g09780	expressed protein	gene	expressed protein	chr8	5651684	5654652	+	CDS,three_prime_UTR
3	LOC_Os02g54150	SAC domain containing protein, putative, expressed	gene	SAC domain containing protein, putative, expressed	chr2	33186454	33192785	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g32920	ribosomal protein, putative, expressed	gene	ribosomal protein, putative, expressed	chr10	17156130	17158143	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g15360	expressed protein	gene	expressed protein	chr2	8597166	8601726	-	three_prime_UTR
3	LOC_Os01g05540	expressed protein	gene	expressed protein	chr1	2639937	2643665	-	three_prime_UTR
3	LOC_Os09g14600	peroxisomal membrane protein-related, putative, expressed	gene	peroxisomal membrane protein-related, putative, expressed	chr9	8643136	8645466	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g41120	expressed protein	gene	expressed protein	chr3	22855172	22859881	-	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os05g32590	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr5	19018488	19020852	+	CDS,three_prime_UTR
3	LOC_Os04g19684	methyl-CpG binding domain containing protein, expressed	gene	methyl-CpG binding domain containing protein, expressed	chr4	10975109	10986563	-	three_prime_UTR
3	LOC_Os01g67210	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr1	38999639	39001860	+	CDS,three_prime_UTR
3	LOC_Os03g54760	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr3	31123055	31126555	+	CDS
3	LOC_Os03g63470	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr3	35848314	35853418	+	CDS,promoter
3	LOC_Os05g37200	solute carrier family 35 member F2, putative, expressed	gene	solute carrier family 35 member F2, putative, expressed	chr5	21688143	21691606	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g18510	expressed protein	gene	expressed protein	chr3	10371716	10374958	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g73530	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr1	42599527	42611389	+	CDS
3	LOC_Os01g52140	expressed protein	gene	expressed protein	chr1	29994151	29998951	+	CDS,three_prime_UTR
3	LOC_Os11g03970	CAMK_KIN1/SNF1/Nim1_like.5 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_KIN1/SNF1/Nim1_like.5 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr11	1602697	1608155	+	CDS
3	LOC_Os01g42120	expressed protein	gene	expressed protein	chr1	23880856	23883162	+	three_prime_UTR,downstream
3	LOC_Os04g42380	ribosomal protein S17, putative, expressed	gene	ribosomal protein S17, putative, expressed	chr4	24891625	24893902	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g15910	UTP--glucose-1-phosphate uridylyltransferase, putative	gene	UTP--glucose-1-phosphate uridylyltransferase, putative	chr1	8957411	8966207	+	CDS
3	LOC_Os03g12550	expressed protein	gene	expressed protein	chr3	6646025	6652920	+	five_prime_UTR,CDS,downstream
3	LOC_Os11g26160	RNA polymerase sigma factor, putative, expressed	gene	RNA polymerase sigma factor, putative, expressed	chr11	14511525	14516221	+	CDS
3	LOC_Os10g31030	EMB1691, putative, expressed	gene	EMB1691, putative, expressed	chr10	16130022	16137023	+	CDS
3	LOC_Os03g58900	galactosyltransferase family protein, putative, expressed	gene	galactosyltransferase family protein, putative, expressed	chr3	33518194	33521589	-	CDS,downstream
3	LOC_Os10g37840	CCB2, putative, expressed	gene	CCB2, putative, expressed	chr10	20185492	20191262	+	three_prime_UTR
3	LOC_Os11g44560	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr11	26468406	26475274	+	CDS
3	LOC_Os05g51640	adhesion regulating molecule family, putative, expressed	gene	adhesion regulating molecule family, putative, expressed	chr5	29555094	29560313	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g06820	hydrolase, alpha/beta fold family domain containing protein, expressed	gene	hydrolase, alpha/beta fold family domain containing protein, expressed	chr6	3218080	3221415	-	CDS,promoter
3	LOC_Os03g57890	zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed	gene	zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed	chr3	32967146	32969783	-	three_prime_UTR,promoter
3	LOC_Os08g27630	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr8	16831464	16836574	-	CDS
3	LOC_Os03g03870	DNA-binding bromodomain-containing protein, putative, expressed	gene	DNA-binding bromodomain-containing protein, putative, expressed	chr3	1751156	1757214	+	CDS,three_prime_UTR
3	LOC_Os07g47630	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr7	28468080	28473190	-	CDS,three_prime_UTR
3	LOC_Os07g23790	expressed protein	gene	expressed protein	chr7	13435686	13439206	-	CDS,five_prime_UTR
3	LOC_Os01g71990	pyrroline-5-carboxylate reductase, putative, expressed	gene	pyrroline-5-carboxylate reductase, putative, expressed	chr1	41716973	41720531	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os09g27210	lecithine cholesterol acyltransferase, putative, expressed	gene	lecithine cholesterol acyltransferase, putative, expressed	chr9	16542045	16548778	-	CDS
3	LOC_Os04g57520	UBX domain-containing protein, putative, expressed	gene	UBX domain-containing protein, putative, expressed	chr4	34030713	34037308	+	CDS
3	LOC_Os03g02090	expressed protein	gene	expressed protein	chr3	661278	665759	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g37530	expressed protein	gene	expressed protein	chr12	22997113	23001992	-	CDS,three_prime_UTR
3	LOC_Os02g51770	TLD family protein, putative, expressed	gene	TLD family protein, putative, expressed	chr2	31701789	31705122	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g43690	WD repeat-containing protein, putative, expressed	gene	WD repeat-containing protein, putative, expressed	chr6	26302840	26311415	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os10g26145	expressed protein	gene	expressed protein	chr10	13472410	13480478	+	CDS,downstream
3	LOC_Os08g13460	hypothetical protein	gene	hypothetical protein	chr8	8010040	8013350	+	CDS
3	LOC_Os09g36020	EAP30/Vps36 family domain containing protein, expressed	gene	EAP30/Vps36 family domain containing protein, expressed	chr9	20744598	20748451	-	CDS
3	LOC_Os09g15835	OBP32pep, putative, expressed	gene	OBP32pep, putative, expressed	chr9	9662455	9664793	-	CDS,three_prime_UTR
3	LOC_Os10g16930	hypothetical protein	gene	hypothetical protein	chr10	8391490	8393461	+	CDS,downstream
3	LOC_Os02g28980	peptidyl-prolyl isomerase, putative, expressed	gene	peptidyl-prolyl isomerase, putative, expressed	chr2	17150560	17155025	-	CDS
3	LOC_Os11g17600	roothairless 1, putative, expressed	gene	roothairless 1, putative, expressed	chr11	9789485	9804846	+	CDS,three_prime_UTR
3	LOC_Os12g35570	tRNA synthetase, putative, expressed	gene	tRNA synthetase, putative, expressed	chr12	21591994	21596254	-	three_prime_UTR,CDS,promoter
3	LOC_Os06g01700	CWC15 homolog A, putative, expressed	gene	CWC15 homolog A, putative, expressed	chr6	412319	415045	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g38160	glycosyl transferase family 17 protein, putative, expressed	gene	glycosyl transferase family 17 protein, putative, expressed	chr2	23077237	23080573	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g13650	alpha-mannosidase 2, putative, expressed	gene	alpha-mannosidase 2, putative, expressed	chr6	7562725	7570103	-	CDS,three_prime_UTR
3	LOC_Os11g05080	powdery mildew resistant protein 5, putative, expressed	gene	powdery mildew resistant protein 5, putative, expressed	chr11	2220606	2224923	+	CDS
3	LOC_Os02g55910	monogalactosyldiacylglycerol synthase, putative, expressed	gene	monogalactosyldiacylglycerol synthase, putative, expressed	chr2	34217248	34221752	+	CDS,three_prime_UTR
3	LOC_Os04g51340	pectinacetylesterase domain containing protein, expressed	gene	pectinacetylesterase domain containing protein, expressed	chr4	30220351	30224273	+	CDS,three_prime_UTR
3	LOC_Os07g34740	NUC153 domain containing protein, expressed	gene	NUC153 domain containing protein, expressed	chr7	20811889	20816928	+	CDS,downstream
3	LOC_Os01g14070	60S ribosomal protein L18a-1, putative, expressed	gene	60S ribosomal protein L18a-1, putative, expressed	chr1	7875233	7877802	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g58640	cleavage and polyadenylation specificity factor subunit 5, putative, expressed	gene	cleavage and polyadenylation specificity factor subunit 5, putative, expressed	chr4	34692692	34696529	-	CDS,three_prime_UTR
3	LOC_Os05g45730	ubiquinone oxidoreductase, putative, expressed	gene	ubiquinone oxidoreductase, putative, expressed	chr5	26431850	26434575	+	three_prime_UTR,promoter,downstream
3	LOC_Os03g61790	RNA 3-terminal phosphate cyclase, putative, expressed	gene	RNA 3-terminal phosphate cyclase, putative, expressed	chr3	35021854	35024667	-	three_prime_UTR,CDS,promoter
3	LOC_Os04g52200	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr4	30822177	30828795	-	CDS
3	LOC_Os11g04440	expressed protein	gene	expressed protein	chr11	1848547	1852977	-	CDS,three_prime_UTR
3	LOC_Os07g02090	Ser/Thr protein phosphatase family protein, putative, expressed	gene	Ser/Thr protein phosphatase family protein, putative, expressed	chr7	657773	662272	+	CDS,three_prime_UTR
3	LOC_Os03g52620	expressed protein	gene	expressed protein	chr3	30172582	30174217	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g40115	expressed protein	gene	expressed protein	chr12	24781737	24783831	+	three_prime_UTR
3	LOC_Os03g42280	B3 DNA binding domain containing protein, expressed	gene	B3 DNA binding domain containing protein, expressed	chr3	23521668	23526489	+	five_prime_UTR,CDS
3	LOC_Os02g15230	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr2	8501441	8504976	+	three_prime_UTR,CDS
3	LOC_Os03g17210	expressed protein	gene	expressed protein	chr3	9590771	9597770	+	CDS,three_prime_UTR
3	LOC_Os01g43120	DEAD/DEAH box helicase, putative, expressed	gene	DEAD/DEAH box helicase, putative, expressed	chr1	24597137	24600848	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g26730	exonuclease, putative, expressed	gene	exonuclease, putative, expressed	chr10	13883252	13886856	+	CDS,three_prime_UTR
3	LOC_Os03g20020	plant neutral invertase domain containing protein, expressed	gene	plant neutral invertase domain containing protein, expressed	chr3	11282058	11286614	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g01760	aminotransferase, classes I and II, domain containing protein, expressed	gene	aminotransferase, classes I and II, domain containing protein, expressed	chr7	445619	450162	-	CDS
3	LOC_Os01g10050	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr1	5245503	5250192	-	three_prime_UTR,promoter
3	LOC_Os01g61720	IQ calmodulin-binding motif domain containing protein, expressed	gene	IQ calmodulin-binding motif domain containing protein, expressed	chr1	35708455	35712619	-	CDS,three_prime_UTR
3	LOC_Os02g20430	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr2	12054829	12057368	+	CDS,downstream
3	LOC_Os12g32230	molybdenum cofactor biosynthesis protein 1, putative, expressed	gene	molybdenum cofactor biosynthesis protein 1, putative, expressed	chr12	19423639	19428120	+	CDS,three_prime_UTR
3	LOC_Os01g03760	expressed protein	gene	expressed protein	chr1	1570420	1575753	-	CDS,three_prime_UTR
3	LOC_Os03g02380	major facilitator superfamily domain-containing protein 5, putative, expressed	gene	major facilitator superfamily domain-containing protein 5, putative, expressed	chr3	841384	845443	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g46090	CAMK_CAMK_like.15 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.15 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr2	28080512	28086283	+	CDS,three_prime_UTR
3	LOC_Os01g56260	hypothetical protein	gene	hypothetical protein	chr1	32395587	32399112	-	CDS
3	LOC_Os03g16874	expressed protein	gene	expressed protein	chr3	9374887	9376664	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g03590	expressed protein	gene	expressed protein	chr2	1461544	1468260	-	three_prime_UTR,promoter,downstream
3	LOC_Os03g54100	potassium channel protein, putative, expressed	gene	potassium channel protein, putative, expressed	chr3	31007714	31010336	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g04010	expressed protein	gene	expressed protein	chr4	1844342	1847190	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g01650	erythronate-4-phosphate dehydrogenase domain containing protein	gene	erythronate-4-phosphate dehydrogenase domain containing protein	chr4	442307	443840	-	CDS,promoter
3	LOC_Os10g11340	nitroreductase family protein, putative, expressed	gene	nitroreductase family protein, putative, expressed	chr10	6303158	6307363	+	CDS,three_prime_UTR
3	LOC_Os09g38970	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr9	22376407	22382011	+	CDS,three_prime_UTR
3	LOC_Os08g10244	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr8	5941664	5953730	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os10g20230	expressed protein	gene	expressed protein	chr10	10091692	10093903	+	three_prime_UTR,downstream
3	LOC_Os02g48000	TBC domain containing protein, expressed	gene	TBC domain containing protein, expressed	chr2	29367149	29375222	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g55630	expressed protein	gene	expressed protein	chr3	31673819	31674701	+	CDS,downstream
3	LOC_Os06g02160	AMP-binding enzyme family protein, expressed	gene	AMP-binding enzyme family protein, expressed	chr6	646034	655851	+	CDS,three_prime_UTR,promoter
3	LOC_Os06g46930	ribosomal protein L24, putative, expressed	gene	ribosomal protein L24, putative, expressed	chr6	28471589	28473786	-	CDS,three_prime_UTR
3	LOC_Os04g44330	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr4	26068244	26071788	+	CDS
3	LOC_Os08g42720	solute carrier family 35 member F1, putative, expressed	gene	solute carrier family 35 member F1, putative, expressed	chr8	27024869	27029441	-	CDS
3	LOC_Os03g06370	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr3	3185735	3189047	+	three_prime_UTR
3	LOC_Os06g46900	phosphosulfolactate synthase-related protein, putative, expressed	gene	phosphosulfolactate synthase-related protein, putative, expressed	chr6	28462766	28465299	-	CDS
3	LOC_Os06g05650	expressed protein	gene	expressed protein	chr6	2554568	2556664	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os03g57160	zinc ion binding protein, putative, expressed	gene	zinc ion binding protein, putative, expressed	chr3	32584566	32591899	-	CDS
3	LOC_Os10g35230	Rf1, mitochondrial precursor, putative, expressed	gene	Rf1, mitochondrial precursor, putative, expressed	chr10	18752231	18753884	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g43040	heavy metal-associated domain containing protein, expressed	gene	heavy metal-associated domain containing protein, expressed	chr7	25789397	25791729	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g22060	pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed	gene	pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed	chr6	12793243	12799359	+	CDS,three_prime_UTR
3	LOC_Os01g64870	expressed protein	gene	expressed protein	chr1	37654276	37660191	-	CDS
3	LOC_Os04g54190	cysteine-rich receptor-like protein kinase 8 precursor, putative, expressed	gene	cysteine-rich receptor-like protein kinase 8 precursor, putative, expressed	chr4	32093040	32096340	-	CDS,three_prime_UTR,five_prime_UTR
3	LOC_Os05g38984	expressed protein	gene	expressed protein	chr5	22808222	22810685	+	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os08g08020	expressed protein	gene	expressed protein	chr8	4545974	4548383	+	CDS,promoter,downstream
3	LOC_Os07g08330	ribosomal protein L4, putative, expressed	gene	ribosomal protein L4, putative, expressed	chr7	4262173	4264799	+	three_prime_UTR,downstream
3	LOC_Os05g07080	S-domain receptor-like protein kinase, putative, expressed	gene	S-domain receptor-like protein kinase, putative, expressed	chr5	3726474	3729407	-	CDS
3	LOC_Os03g05740	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr3	2856121	2859228	-	CDS
3	LOC_Os05g47500	MDR-like ABC transporter, putative, expressed	gene	MDR-like ABC transporter, putative, expressed	chr5	27149269	27154923	+	CDS,promoter
3	LOC_Os12g33180	pnn protein, putative, expressed	gene	pnn protein, putative, expressed	chr12	20047867	20050606	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g04660	oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed	gene	oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed	chr6	2029468	2033814	+	CDS,three_prime_UTR
3	LOC_Os04g41310	STRUBBELIG-RECEPTOR FAMILY 8 precursor, putative, expressed	gene	STRUBBELIG-RECEPTOR FAMILY 8 precursor, putative, expressed	chr4	24327275	24330629	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g18264	expressed protein	gene	expressed protein	chr3	10234464	10239358	-	three_prime_UTR,promoter,downstream
3	LOC_Os04g50204	protein transport protein-related, putative, expressed	gene	protein transport protein-related, putative, expressed	chr4	29779844	29783038	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g60110	E2F-related protein, putative, expressed	gene	E2F-related protein, putative, expressed	chr1	34768074	34771328	-	CDS,three_prime_UTR
3	LOC_Os01g55860	expressed protein	gene	expressed protein	chr1	32166837	32170299	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g38392	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr2	23205763	23214163	+	CDS
3	LOC_Os07g10860	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	5930014	5938270	+	CDS
3	LOC_Os11g20790	adenylate kinase, putative, expressed	gene	adenylate kinase, putative, expressed	chr11	12028946	12033855	+	CDS,three_prime_UTR
3	LOC_Os11g40070	expressed protein	gene	expressed protein	chr11	23426274	23430009	+	CDS,three_prime_UTR
3	LOC_Os08g27050	expressed protein	gene	expressed protein	chr8	16522658	16528520	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g59100	cytokinin-N-glucosyltransferase 1, putative, expressed	gene	cytokinin-N-glucosyltransferase 1, putative, expressed	chr1	34140359	34144159	+	five_prime_UTR,promoter
3	LOC_Os05g24010	receptor protein kinase-like, putative, expressed	gene	receptor protein kinase-like, putative, expressed	chr5	13776659	13782692	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g06600	nuf2 family protein, expressed	gene	nuf2 family protein, expressed	chr8	3721368	3725249	-	CDS,three_prime_UTR
3	LOC_Os03g32580	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	gene	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	chr3	18634658	18637300	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g02620	chaperone protein dnaJ, putative, expressed	gene	chaperone protein dnaJ, putative, expressed	chr6	926339	931584	-	CDS,three_prime_UTR
3	LOC_Os01g50849	expressed protein	gene	expressed protein	chr1	29205261	29208562	-	three_prime_UTR
3	LOC_Os01g48440	glycosyltransferase family 43 protein, putative, expressed	gene	glycosyltransferase family 43 protein, putative, expressed	chr1	27756719	27760689	-	CDS,three_prime_UTR
3	LOC_Os03g11420	Os3bglu6 - beta-glucosidase/beta-fucosidase/beta-galactosidase, expressed	gene	Os3bglu6 - beta-glucosidase/beta-fucosidase/beta-galactosidase, expressed	chr3	5875244	5882304	-	CDS,promoter
3	LOC_Os05g43610	ATBARD1/BARD1, putative, expressed	gene	ATBARD1/BARD1, putative, expressed	chr5	25294650	25300182	-	CDS
3	LOC_Os03g18310	6PF-2-K/Fru-2,6-P2ASE liver isozyme, putative, expressed	gene	6PF-2-K/Fru-2,6-P2ASE liver isozyme, putative, expressed	chr3	10257526	10270089	+	CDS,three_prime_UTR
3	LOC_Os11g38949	unknown	gene	unknown	chr11	22715318	22716667	+	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os03g48830	ribosomal protein-related, putative, expressed	gene	ribosomal protein-related, putative, expressed	chr3	27813065	27815975	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os10g37420	cytochrome b5-like Heme/Steroid binding domain containing protein, expressed	gene	cytochrome b5-like Heme/Steroid binding domain containing protein, expressed	chr10	19957180	19959748	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g48090	helicase conserved C-terminal domain containing protein, expressed	gene	helicase conserved C-terminal domain containing protein, expressed	chr11	28466210	28477692	-	CDS,three_prime_UTR
3	LOC_Os10g29514	expressed protein	gene	expressed protein	chr10	15259378	15264901	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os12g40440	expressed protein	gene	expressed protein	chr12	24993476	24996177	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g11120	methionyl-tRNA synthetase, putative, expressed	gene	methionyl-tRNA synthetase, putative, expressed	chr3	5720104	5727615	+	CDS
3	LOC_Os08g30884	elongation factor Ts, putative, expressed	gene	elongation factor Ts, putative, expressed	chr8	19056904	19063196	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g45480	hydrolase, putative, expressed	gene	hydrolase, putative, expressed	chr6	27494297	27498535	-	CDS
3	LOC_Os12g03380	expressed protein	gene	expressed protein	chr12	1313533	1314090	+	CDS,promoter
3	LOC_Os03g26080	nucleoside-triphosphatase, putative, expressed	gene	nucleoside-triphosphatase, putative, expressed	chr3	14937104	14940950	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g37660	vegetative storage protein, putative, expressed	gene	vegetative storage protein, putative, expressed	chr11	21757522	21764913	-	three_prime_UTR
3	LOC_Os12g21890	PTEN, putative, expressed	gene	PTEN, putative, expressed	chr12	12318999	12327551	-	CDS
3	LOC_Os03g03660	CAMK_CAMK_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr3	1623875	1628526	+	CDS
3	LOC_Os08g14990	receptor-like protein kinase 2 precursor, putative, expressed	gene	receptor-like protein kinase 2 precursor, putative, expressed	chr8	9038739	9042364	+	CDS
3	LOC_Os01g59860	expressed protein	gene	expressed protein	chr1	34619190	34622888	+	CDS,promoter
3	LOC_Os04g26910	oxidoreductase, aldo/keto reductase family protein, putative, expressed	gene	oxidoreductase, aldo/keto reductase family protein, putative, expressed	chr4	15743652	15746953	+	CDS
3	LOC_Os03g18810	aminotransferase, classes I and II, domain containing protein, expressed	gene	aminotransferase, classes I and II, domain containing protein, expressed	chr3	10541763	10545177	+	CDS
3	LOC_Os11g28340	ER lumen protein retaining receptor, putative, expressed	gene	ER lumen protein retaining receptor, putative, expressed	chr11	15840569	15844379	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g38570	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr8	24381656	24386402	+	CDS
3	LOC_Os03g48104	expressed protein	gene	expressed protein	chr3	27356100	27357606	-	three_prime_UTR,promoter
3	LOC_Os01g13190	histidinol dehydrogenase, chloroplast precursor, putative, expressed	gene	histidinol dehydrogenase, chloroplast precursor, putative, expressed	chr1	7347563	7351146	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g07950	OsGrx_S15.2 - glutaredoxin subgroup II, expressed	gene	OsGrx_S15.2 - glutaredoxin subgroup II, expressed	chr1	3841753	3844541	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g37949	serine/threonine-protein kinase SRPK1, putative, expressed	gene	serine/threonine-protein kinase SRPK1, putative, expressed	chr9	21880614	21884141	-	CDS,three_prime_UTR
3	LOC_Os01g73620	expressed protein	gene	expressed protein	chr1	42645003	42653076	+	CDS
3	LOC_Os01g01040	expressed protein	gene	expressed protein	chr1	15292	19323	+	CDS,three_prime_UTR
3	LOC_Os03g19690	expressed protein	gene	expressed protein	chr3	11070612	11079836	+	CDS,three_prime_UTR,promoter
3	LOC_Os10g18220	GHMP kinases ATP-binding protein, putative, expressed	gene	GHMP kinases ATP-binding protein, putative, expressed	chr10	9185065	9190173	+	CDS,three_prime_UTR
3	LOC_Os02g40460	S1 RNA binding domain containing protein, expressed	gene	S1 RNA binding domain containing protein, expressed	chr2	24525422	24528960	-	CDS
3	LOC_Os01g55700	NLI interacting factor-like phosphatase, putative, expressed	gene	NLI interacting factor-like phosphatase, putative, expressed	chr1	32071405	32081444	-	CDS
3	LOC_Os01g47680	60S ribosomal protein L18a-1, putative, expressed	gene	60S ribosomal protein L18a-1, putative, expressed	chr1	27270306	27272989	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g66300	KH domain containing protein, putative, expressed	gene	KH domain containing protein, putative, expressed	chr1	38508080	38512573	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g57540	adenylate kinase, putative, expressed	gene	adenylate kinase, putative, expressed	chr4	34051299	34053774	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g08470	expressed protein	gene	expressed protein	chr6	4161932	4166043	-	CDS,three_prime_UTR,downstream
3	LOC_Os09g36220	response regulator receiver domain containing protein, expressed	gene	response regulator receiver domain containing protein, expressed	chr9	20884691	20889362	-	CDS
3	LOC_Os02g04800	AIG2-like family domain containing protein, expressed	gene	AIG2-like family domain containing protein, expressed	chr2	2205767	2208213	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g14180	OsIAA17 - Auxin-responsive Aux/IAA gene family member, expressed	gene	OsIAA17 - Auxin-responsive Aux/IAA gene family member, expressed	chr5	7950813	7954327	+	CDS,three_prime_UTR
3	LOC_Os12g02120	dual specificity protein phosphatase, putative, expressed	gene	dual specificity protein phosphatase, putative, expressed	chr12	638746	645685	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g53270	stem-specific protein TSJT1, putative, expressed	gene	stem-specific protein TSJT1, putative, expressed	chr3	30553595	30556581	-	CDS,three_prime_UTR
3	LOC_Os08g31130	integral membrane protein DUF6 containing protein, expressed	gene	integral membrane protein DUF6 containing protein, expressed	chr8	19219351	19224808	-	CDS,promoter
3	LOC_Os12g08180	receptor-like protein kinase 2 precursor, putative, expressed	gene	receptor-like protein kinase 2 precursor, putative, expressed	chr12	4177403	4181622	-	CDS,three_prime_UTR
3	LOC_Os03g05470	tyrosine protein kinase domain containing protein, putative, expressed	gene	tyrosine protein kinase domain containing protein, putative, expressed	chr3	2706459	2709817	+	CDS,downstream
3	LOC_Os02g49570	OsProtIV1 - Putative Protease IV homologue; Domain 2 is a SPH, expressed	gene	OsProtIV1 - Putative Protease IV homologue; Domain 2 is a SPH, expressed	chr2	30291295	30300300	-	three_prime_UTR,promoter
3	LOC_Os05g23840	expressed protein	gene	expressed protein	chr5	13645280	13648967	+	three_prime_UTR
3	LOC_Os05g04850	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr5	2331034	2334253	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g40660	MA3 domain containing protein, expressed	gene	MA3 domain containing protein, expressed	chr4	23948715	23953418	-	CDS,three_prime_UTR,downstream
3	LOC_Os10g03550	expressed protein	gene	expressed protein	chr10	1531771	1535173	+	CDS
3	LOC_Os12g03860	major facilitator superfamily antiporter, putative, expressed	gene	major facilitator superfamily antiporter, putative, expressed	chr12	1583171	1588135	-	CDS
3	LOC_Os05g38460	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr5	22490745	22498509	-	CDS,three_prime_UTR
3	LOC_Os01g46240	lipase class 3 family protein, putative, expressed	gene	lipase class 3 family protein, putative, expressed	chr1	26295650	26297563	+	CDS,promoter
3	LOC_Os10g41200	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr10	22056913	22060143	-	CDS
3	LOC_Os02g40030	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr2	24229799	24233912	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g28730	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr5	16790231	16793165	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g29120	STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	gene	STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	chr6	16603792	16615266	-	CDS
3	LOC_Os02g49080	KH domain containing protein, putative, expressed	gene	KH domain containing protein, putative, expressed	chr2	30005197	30009770	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g27350	atuA, putative, expressed	gene	atuA, putative, expressed	chr7	15911879	15916906	+	CDS,three_prime_UTR
3	LOC_Os07g31460	peptide-Nasparagine amidase, putative, expressed	gene	peptide-Nasparagine amidase, putative, expressed	chr7	18642027	18652635	+	CDS
3	LOC_Os05g04660	thioesterase family protein, putative, expressed	gene	thioesterase family protein, putative, expressed	chr5	2196405	2197918	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g08230	expressed protein	gene	expressed protein	chr12	4198289	4201862	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os09g33960	expressed protein	gene	expressed protein	chr9	20042980	20051406	+	three_prime_UTR,downstream
3	LOC_Os02g36360	ZOS2-11 - C2H2 zinc finger protein, expressed	gene	ZOS2-11 - C2H2 zinc finger protein, expressed	chr2	21950719	21954254	-	three_prime_UTR
3	LOC_Os08g08080	BUD13, putative, expressed	gene	BUD13, putative, expressed	chr8	4585481	4590242	+	CDS,three_prime_UTR
3	LOC_Os12g38730	expressed protein	gene	expressed protein	chr12	23760790	23764434	-	CDS
3	LOC_Os10g43040	ankyrin repeat domain-containing protein 28, putative, expressed	gene	ankyrin repeat domain-containing protein 28, putative, expressed	chr10	23114885	23118025	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g58520	disease resistance protein, putative, expressed	gene	disease resistance protein, putative, expressed	chr1	33815574	33820089	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os05g02220	ACT domain containing protein, expressed	gene	ACT domain containing protein, expressed	chr5	699003	705325	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g59550	senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed	gene	senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed	chr1	34426669	34435272	-	CDS
3	LOC_Os09g32450	DNA topoisomerase 3 protein, putative, expressed	gene	DNA topoisomerase 3 protein, putative, expressed	chr9	19368774	19382538	+	CDS,three_prime_UTR
3	LOC_Os12g38940	ZOS12-06 - C2H2 zinc finger protein, expressed	gene	ZOS12-06 - C2H2 zinc finger protein, expressed	chr12	23910570	23913206	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g04650	expressed protein	gene	expressed protein	chr5	2194844	2196443	+	three_prime_UTR,downstream
3	LOC_Os11g14230	uncharacterized protein yqxC, putative, expressed	gene	uncharacterized protein yqxC, putative, expressed	chr11	7960184	7964791	-	CDS
3	LOC_Os09g37400	OsSAUR45 - Auxin-responsive SAUR gene family member	gene	OsSAUR45 - Auxin-responsive SAUR gene family member	chr9	21585632	21586301	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g02270	expressed protein	gene	expressed protein	chr3	770438	776096	+	CDS
3	LOC_Os08g40890	spermidine synthase-related, putative, expressed	gene	spermidine synthase-related, putative, expressed	chr8	25864371	25867563	-	three_prime_UTR,downstream
3	LOC_Os05g36920	histone deacetylase, putative, expressed	gene	histone deacetylase, putative, expressed	chr5	21499706	21503043	-	CDS,promoter
3	LOC_Os05g37330	60S acidic ribosomal protein, putative, expressed	gene	60S acidic ribosomal protein, putative, expressed	chr5	21772857	21775125	+	CDS,three_prime_UTR
3	LOC_Os10g31940	inosine triphosphate pyrophosphatase, putative, expressed	gene	inosine triphosphate pyrophosphatase, putative, expressed	chr10	16697237	16700502	-	CDS
3	LOC_Os06g08300	FAD dependent oxidoreductase domain containing protein, expressed	gene	FAD dependent oxidoreductase domain containing protein, expressed	chr6	4018848	4021603	+	CDS,three_prime_UTR,promoter
3	LOC_Os02g58010	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	35509890	35511189	-	CDS,promoter,downstream
3	LOC_Os01g51860	violaxanthin de-epoxidase, putative, expressed	gene	violaxanthin de-epoxidase, putative, expressed	chr1	29815764	29818693	+	CDS
3	LOC_Os01g48990	uncharacterized kinase mug58, putative, expressed	gene	uncharacterized kinase mug58, putative, expressed	chr1	28125531	28129233	+	CDS
3	LOC_Os06g22654	expressed protein	gene	expressed protein	chr6	13171165	13174102	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g14660	SET domain containing protein, expressed	gene	SET domain containing protein, expressed	chr8	8810778	8815703	-	CDS
3	LOC_Os11g39320	LZ-NBS-LRR class, putative, expressed	gene	LZ-NBS-LRR class, putative, expressed	chr11	22941973	22946899	+	CDS,downstream
3	LOC_Os12g06200	E2F family transcription factor protein, putative, expressed	gene	E2F family transcription factor protein, putative, expressed	chr12	2938686	2944066	-	CDS,three_prime_UTR
3	LOC_Os02g22130	expressed protein	gene	expressed protein	chr2	13173635	13176602	+	CDS,three_prime_UTR
3	LOC_Os01g08680	myb/SANT domain protein, putative, expressed	gene	myb/SANT domain protein, putative, expressed	chr1	4321727	4325342	-	CDS
3	LOC_Os12g38620	bromodomain associated family protein, expressed	gene	bromodomain associated family protein, expressed	chr12	23692420	23696237	-	three_prime_UTR,downstream
3	LOC_Os04g34360	serine/threonine-protein kinase receptor precursor, putative, expressed	gene	serine/threonine-protein kinase receptor precursor, putative, expressed	chr4	20639161	20641294	+	three_prime_UTR,downstream
3	LOC_Os01g56190	HVT1, putative, expressed	gene	HVT1, putative, expressed	chr1	32349469	32359721	+	CDS
3	LOC_Os12g08060	universal stress protein family protein	gene	universal stress protein family protein	chr12	4092623	4096609	-	CDS,promoter
3	LOC_Os02g35470	calmodulin binding protein, putative, expressed	gene	calmodulin binding protein, putative, expressed	chr2	21314057	21319254	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g46640	UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase, putative, expressed	gene	UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase, putative, expressed	chr7	27867850	27875658	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g14980	RPA3 - Putative single-stranded DNA binding complex subunit 3, expressed	gene	RPA3 - Putative single-stranded DNA binding complex subunit 3, expressed	chr1	8395498	8397622	-	CDS,three_prime_UTR
3	LOC_Os01g65460	beta-galactosidase precursor, putative, expressed	gene	beta-galactosidase precursor, putative, expressed	chr1	37993470	38000541	+	three_prime_UTR
3	LOC_Os07g15460	metal transporter Nramp6, putative, expressed	gene	metal transporter Nramp6, putative, expressed	chr7	8965029	8969888	+	CDS,five_prime_UTR
3	LOC_Os03g11910	DnaK family protein, putative, expressed	gene	DnaK family protein, putative, expressed	chr3	6242990	6246317	-	CDS
3	LOC_Os03g05320	expressed protein	gene	expressed protein	chr3	2580180	2582578	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g05040	cyclin-related protein, putative, expressed	gene	cyclin-related protein, putative, expressed	chr2	2397459	2404974	+	CDS
3	LOC_Os05g12140	Leucine Rich Repeat family protein, expressed	gene	Leucine Rich Repeat family protein, expressed	chr5	6936801	6939713	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g23890	protein transporter, putative, expressed	gene	protein transporter, putative, expressed	chr2	13834534	13842236	-	CDS,three_prime_UTR
3	LOC_Os10g39910	expressed protein	gene	expressed protein	chr10	21278390	21287686	+	CDS,promoter
3	LOC_Os03g24184	TRAF-type zinc finger domain-containing protein 1, putative, expressed	gene	TRAF-type zinc finger domain-containing protein 1, putative, expressed	chr3	13742270	13746877	-	CDS
3	LOC_Os03g03360	ribosomal protein L5, putative, expressed	gene	ribosomal protein L5, putative, expressed	chr3	1431785	1434345	-	three_prime_UTR
3	LOC_Os03g51540	Ser/Thr protein phosphatase family protein, putative, expressed	gene	Ser/Thr protein phosphatase family protein, putative, expressed	chr3	29473359	29477934	+	CDS
3	LOC_Os05g04520	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr5	2095993	2100410	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g57540	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr1	33239442	33242574	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os01g55540	aminotransferase, classes I and II, domain containing protein, expressed	gene	aminotransferase, classes I and II, domain containing protein, expressed	chr1	31997607	32002646	-	CDS,three_prime_UTR
3	LOC_Os02g01180	kinesin motor domain containing protein, putative, expressed	gene	kinesin motor domain containing protein, putative, expressed	chr2	97998	107892	-	CDS
3	LOC_Os07g32790	ankyrin repeat domain containing protein, expressed	gene	ankyrin repeat domain containing protein, expressed	chr7	19613248	19616481	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g14730	cyclin-A1, putative, expressed	gene	cyclin-A1, putative, expressed	chr5	8367279	8370265	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g33700	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr10	17701965	17705693	-	three_prime_UTR,promoter
3	LOC_Os08g43790	carrier, putative	gene	carrier, putative	chr8	27648932	27649663	+	CDS,promoter,downstream
3	LOC_Os01g19150	CGMC_GSK.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	gene	CGMC_GSK.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	chr1	10821559	10826133	+	CDS,three_prime_UTR,promoter
3	LOC_Os07g39980	GA22009-PA, putative, expressed	gene	GA22009-PA, putative, expressed	chr7	23984280	23988962	+	CDS
3	LOC_Os08g43060	expressed protein	gene	expressed protein	chr8	27207614	27214328	-	CDS,three_prime_UTR
3	LOC_Os03g63140	nitrate-induced NOI protein, expressed	gene	nitrate-induced NOI protein, expressed	chr3	35682311	35685257	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g60620	DnaK family protein, putative, expressed	gene	DnaK family protein, putative, expressed	chr3	34439193	34443814	+	CDS
3	LOC_Os09g29170	CAMK_CAMK_like.38 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.38 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr9	17733588	17737427	-	three_prime_UTR
3	LOC_Os04g28234	Rf1, mitochondrial precursor, putative, expressed	gene	Rf1, mitochondrial precursor, putative, expressed	chr4	16512949	16521475	+	three_prime_UTR,downstream
3	LOC_Os11g19460	haloacid dehalogenase-like hydrolase family protein, putative, expressed	gene	haloacid dehalogenase-like hydrolase family protein, putative, expressed	chr11	11196689	11201705	+	three_prime_UTR,downstream
3	LOC_Os02g10510	Ubiquitin family domain containing protein, expressed	gene	Ubiquitin family domain containing protein, expressed	chr2	5523987	5528724	+	CDS
3	LOC_Os11g19810	PWWP domain containing protein, expressed	gene	PWWP domain containing protein, expressed	chr11	11405817	11410493	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g43360	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr3	24172396	24178539	-	CDS,three_prime_UTR
3	LOC_Os10g33790	expressed protein	gene	expressed protein	chr10	17834638	17839572	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g14950	importin subunit alpha, putative, expressed	gene	importin subunit alpha, putative, expressed	chr1	8381094	8386260	+	CDS,three_prime_UTR
3	LOC_Os03g58190	expressed protein	gene	expressed protein	chr3	33131434	33134390	-	CDS,promoter,downstream
3	LOC_Os02g48340	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr2	29588736	29593032	+	three_prime_UTR,downstream
3	LOC_Os03g48940	chloride channel protein CLC-d, putative, expressed	gene	chloride channel protein CLC-d, putative, expressed	chr3	27854801	27864993	-	CDS,three_prime_UTR
3	LOC_Os05g01540	serine/arginine repetitive matrix protein 1, putative, expressed	gene	serine/arginine repetitive matrix protein 1, putative, expressed	chr5	316949	320774	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g45170	leucine-rich repeat family protein, putative, expressed	gene	leucine-rich repeat family protein, putative, expressed	chr4	26518207	26523443	+	CDS
3	LOC_Os06g50030	CAMK_CAMK_like.30 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.30 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr6	30300725	30307400	+	CDS,three_prime_UTR
3	LOC_Os03g42020	calcium-transporting ATPase, plasma membrane-type, putative, expressed	gene	calcium-transporting ATPase, plasma membrane-type, putative, expressed	chr3	23339979	23345505	+	CDS,promoter
3	LOC_Os04g44590	expressed protein	gene	expressed protein	chr4	26202417	26206687	+	three_prime_UTR,CDS
3	LOC_Os06g13020	DNA polymerase lambda, putative, expressed	gene	DNA polymerase lambda, putative, expressed	chr6	7127120	7132516	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g10520	nucleotide binding protein, putative, expressed	gene	nucleotide binding protein, putative, expressed	chr7	5658652	5666027	+	three_prime_UTR,downstream
3	LOC_Os05g01240	AML1, putative, expressed	gene	AML1, putative, expressed	chr5	160686	167934	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g46760	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr7	27944185	27947157	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os12g08270	inositol-1-monophosphatase, putative, expressed	gene	inositol-1-monophosphatase, putative, expressed	chr12	4212179	4215341	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g07880	DNA binding protein, putative, expressed	gene	DNA binding protein, putative, expressed	chr2	4129117	4133821	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g35150	splicing factor U2AF, putative, expressed	gene	splicing factor U2AF, putative, expressed	chr2	21104860	21110616	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g23169	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr7	13056799	13067292	-	CDS,five_prime_UTR
3	LOC_Os05g23600	dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit precursor, putative, expressed	gene	dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit precursor, putative, expressed	chr5	13472086	13476878	+	CDS,downstream
3	LOC_Os02g09690	expressed protein	gene	expressed protein	chr2	4974451	4984760	+	five_prime_UTR,promoter
3	LOC_Os03g20530	DUF630/DUF632 domains containing protein, putative, expressed	gene	DUF630/DUF632 domains containing protein, putative, expressed	chr3	11628088	11634277	-	CDS,three_prime_UTR
3	LOC_Os06g48350	CPuORF14 - conserved peptide uORF-containing transcript, expressed	gene	CPuORF14 - conserved peptide uORF-containing transcript, expressed	chr6	29233806	29237559	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g08754	OsMADS47 - MADS-box family gene with MIKCc type-box, expressed	gene	OsMADS47 - MADS-box family gene with MIKCc type-box, expressed	chr3	4518407	4524780	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g02880	fructose-bisphospate aldolase isozyme, putative, expressed	gene	fructose-bisphospate aldolase isozyme, putative, expressed	chr1	1015065	1018545	+	CDS
3	LOC_Os09g34280	ankyrin repeat-containing protein, putative, expressed	gene	ankyrin repeat-containing protein, putative, expressed	chr9	20235938	20240138	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g19500	ubiquitin-conjugating enzyme, putative, expressed	gene	ubiquitin-conjugating enzyme, putative, expressed	chr3	10961617	10964515	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g31920	FYVE zinc finger domain containing protein, expressed	gene	FYVE zinc finger domain containing protein, expressed	chr5	18524481	18532926	-	CDS,three_prime_UTR
3	LOC_Os06g51240	expressed protein	gene	expressed protein	chr6	31007001	31010738	+	three_prime_UTR
3	LOC_Os10g28340	heat stress transcription factor, putative, expressed	gene	heat stress transcription factor, putative, expressed	chr10	14674867	14678941	-	CDS,three_prime_UTR
3	LOC_Os05g01500	tubulin-specific chaperone E, putative, expressed	gene	tubulin-specific chaperone E, putative, expressed	chr5	291425	296877	+	CDS,downstream
3	LOC_Os04g58130	katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed	gene	katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed	chr4	34428554	34438007	-	CDS,three_prime_UTR
3	LOC_Os07g29630	SNF7 domain containing protein, putative, expressed	gene	SNF7 domain containing protein, putative, expressed	chr7	17420308	17424463	-	CDS,downstream
3	LOC_Os04g43020	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr4	25268309	25274666	+	CDS,three_prime_UTR
3	LOC_Os06g09330	ubiquitin-conjugating enzyme, putative, expressed	gene	ubiquitin-conjugating enzyme, putative, expressed	chr6	4689735	4694317	-	CDS,promoter
3	LOC_Os07g23200	F-actin-capping protein subunit alpha, putative, expressed	gene	F-actin-capping protein subunit alpha, putative, expressed	chr7	13073445	13077536	-	CDS,three_prime_UTR
3	LOC_Os01g62350	60S ribosomal protein L36-2, putative, expressed	gene	60S ribosomal protein L36-2, putative, expressed	chr1	36082008	36084619	-	three_prime_UTR,promoter
3	LOC_Os06g04710	expressed protein	gene	expressed protein	chr6	2056220	2061228	-	CDS
3	LOC_Os09g38268	RNA polymerase IV largest subunit, putative, expressed	gene	RNA polymerase IV largest subunit, putative, expressed	chr9	22028718	22032258	+	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os11g35340	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr11	20254523	20257538	+	CDS,three_prime_UTR
3	LOC_Os03g13590	potyvirus VPg interacting protein, putative, expressed	gene	potyvirus VPg interacting protein, putative, expressed	chr3	7346519	7350722	+	CDS,three_prime_UTR
3	LOC_Os06g37420	histone deacetylase, putative, expressed	gene	histone deacetylase, putative, expressed	chr6	22122245	22126371	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g07530	splicing factor, putative, expressed	gene	splicing factor, putative, expressed	chr12	3742732	3748503	+	three_prime_UTR,downstream
3	LOC_Os02g05330	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr2	2557625	2561094	+	CDS,three_prime_UTR,promoter
3	LOC_Os07g19494	expressed protein	gene	expressed protein	chr7	11527007	11532716	+	CDS
3	LOC_Os04g52940	SIT4 phosphatase-associated protein domain containing protein, expressed	gene	SIT4 phosphatase-associated protein domain containing protein, expressed	chr4	31346804	31356812	+	CDS
3	LOC_Os02g08130	FGGY family of carbohydrate kinases, putative, expressed	gene	FGGY family of carbohydrate kinases, putative, expressed	chr2	4302070	4309652	+	three_prime_UTR
3	LOC_Os07g08170	ruvB-like, putative, expressed	gene	ruvB-like, putative, expressed	chr7	4149688	4155067	-	CDS,three_prime_UTR
3	LOC_Os06g35030	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr6	20372811	20380427	+	CDS,three_prime_UTR
3	LOC_Os03g45344	expressed protein	gene	expressed protein	chr3	25599307	25601960	-	three_prime_UTR
3	LOC_Os01g74340	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr1	43070472	43071491	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g58460	beta-catenin-like protein 1, putative, expressed	gene	beta-catenin-like protein 1, putative, expressed	chr2	35741361	35745423	-	CDS
3	LOC_Os01g01369	3-beta-hydroxysteroid-Delta-isomerase, putative, expressed	gene	3-beta-hydroxysteroid-Delta-isomerase, putative, expressed	chr1	185246	189846	-	CDS,three_prime_UTR
3	LOC_Os01g07390	zinc finger, C3HC4 type family protein, expressed	gene	zinc finger, C3HC4 type family protein, expressed	chr1	3500094	3503833	+	three_prime_UTR,downstream
3	LOC_Os07g40930	WD repeat-containing protein 12, putative, expressed	gene	WD repeat-containing protein 12, putative, expressed	chr7	24492708	24496582	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g35210	resistance protein, putative	gene	resistance protein, putative	chr2	21160810	21164084	+	CDS,downstream
3	LOC_Os06g05050	OsWAK61 - OsWAK receptor-like protein kinase, expressed	gene	OsWAK61 - OsWAK receptor-like protein kinase, expressed	chr6	2228207	2232268	+	CDS,downstream
3	LOC_Os06g48230	DNA-directed RNA polymerases I, II, and III subunit RPABC3, putative, expressed	gene	DNA-directed RNA polymerases I, II, and III subunit RPABC3, putative, expressed	chr6	29172197	29174610	-	three_prime_UTR,promoter,downstream
3	LOC_Os02g20380	expressed protein	gene	expressed protein	chr2	12008705	12015510	-	CDS,three_prime_UTR
3	LOC_Os04g58990	CAMK_CAMK_like_ULKh_APGy.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like_ULKh_APGy.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr4	34904237	34906152	-	three_prime_UTR,promoter,downstream
3	LOC_Os10g23204	CutA, chloroplast precursor, putative, expressed	gene	CutA, chloroplast precursor, putative, expressed	chr10	12036580	12041835	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g17090	stripe rust resistance protein Yr10, putative, expressed	gene	stripe rust resistance protein Yr10, putative, expressed	chr12	9779367	9784168	-	CDS,promoter
3	LOC_Os10g42240	kinase, pfkB family, putative, expressed	gene	kinase, pfkB family, putative, expressed	chr10	22678678	22681579	+	CDS,three_prime_UTR
3	LOC_Os04g51430	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr4	30272828	30278218	+	CDS,downstream
3	LOC_Os01g23680	rossmann fold nucleotide-binding protein involved in DNA uptake, putative, expressed	gene	rossmann fold nucleotide-binding protein involved in DNA uptake, putative, expressed	chr1	13318269	13322921	-	CDS
3	LOC_Os06g06470	U-box domain containing heat shock protein, putative, expressed	gene	U-box domain containing heat shock protein, putative, expressed	chr6	3041191	3045239	+	CDS
3	LOC_Os02g33020	SOUL heme-binding protein, putative, expressed	gene	SOUL heme-binding protein, putative, expressed	chr2	19626566	19629383	+	CDS,downstream
3	LOC_Os04g30780	eukaryotic translation initiation factor 3 subunit H, putative, expressed	gene	eukaryotic translation initiation factor 3 subunit H, putative, expressed	chr4	18229081	18233774	-	CDS,three_prime_UTR,downstream
3	LOC_Os07g03060	expressed protein	gene	expressed protein	chr7	1158806	1162372	+	CDS,three_prime_UTR,promoter
3	LOC_Os11g03780	alpha-N-arabinofuranosidase, putative, expressed	gene	alpha-N-arabinofuranosidase, putative, expressed	chr11	1483074	1491359	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g42160	kinesin motor domain containing protein, putative, expressed	gene	kinesin motor domain containing protein, putative, expressed	chr12	26097399	26102591	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g38180	Yip1 domain containing protein, expressed	gene	Yip1 domain containing protein, expressed	chr5	22331358	22334546	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g24600	cysteine proteinase 1 precursor, putative, expressed	gene	cysteine proteinase 1 precursor, putative, expressed	chr4	14120329	14123326	+	three_prime_UTR,downstream
3	LOC_Os04g09540	acyl-protein thioesterase, putative, expressed	gene	acyl-protein thioesterase, putative, expressed	chr4	5116469	5119814	+	five_prime_UTR,CDS,promoter
3	LOC_Os08g07330	RGH1A, putative, expressed	gene	RGH1A, putative, expressed	chr8	4104401	4108961	+	CDS
3	LOC_Os06g42810	UBA and UBX domain-containing protein, putative, expressed	gene	UBA and UBX domain-containing protein, putative, expressed	chr6	25736419	25740550	-	CDS
3	LOC_Os01g25880	dephospho-CoA kinase, putative, expressed	gene	dephospho-CoA kinase, putative, expressed	chr1	14678280	14682409	-	CDS
3	LOC_Os02g43920	cell division cycle protein 23, putative, expressed	gene	cell division cycle protein 23, putative, expressed	chr2	26505239	26509976	+	CDS
3	LOC_Os02g54624	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr2	33451041	33455683	+	CDS,three_prime_UTR
3	LOC_Os02g35090	expressed protein	gene	expressed protein	chr2	21053518	21055784	-	three_prime_UTR,promoter
3	LOC_Os11g34880	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr11	19978742	19984209	-	CDS
3	LOC_Os01g37280	expressed protein	gene	expressed protein	chr1	20815910	20819401	+	three_prime_UTR
3	LOC_Os10g41590	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr10	22317173	22324352	+	CDS,three_prime_UTR
3	LOC_Os05g51420	hypersensitive-induced response protein, putative, expressed	gene	hypersensitive-induced response protein, putative, expressed	chr5	29424082	29429531	-	CDS,five_prime_UTR
3	LOC_Os09g38768	cell cycle control protein, putative, expressed	gene	cell cycle control protein, putative, expressed	chr9	22274763	22277382	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g02756	1,3-beta-glucan synthase component, putative, expressed	gene	1,3-beta-glucan synthase component, putative, expressed	chr3	1065754	1074702	+	CDS,three_prime_UTR
3	LOC_Os03g06070	la domain containing protein, putative, expressed	gene	la domain containing protein, putative, expressed	chr3	3038732	3044372	+	CDS,three_prime_UTR
3	LOC_Os03g27790	EF hand family protein, putative	gene	EF hand family protein, putative	chr3	15935694	15936267	-	CDS,promoter,downstream
3	LOC_Os07g43170	adenylate kinase, putative, expressed	gene	adenylate kinase, putative, expressed	chr7	25877408	25881565	-	CDS,three_prime_UTR
3	LOC_Os09g38660	expressed protein	gene	expressed protein	chr9	22229810	22232304	-	CDS,promoter
3	LOC_Os08g14880	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr8	8965301	8970001	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g31960	ATP/GTP binding protein, putative, expressed	gene	ATP/GTP binding protein, putative, expressed	chr2	18884051	18891149	-	CDS,five_prime_UTR
3	LOC_Os07g47720	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr7	28502067	28504502	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g17080	OsMPK15 - Putative MAPK based on amino acid sequence homology, expressed	gene	OsMPK15 - Putative MAPK based on amino acid sequence homology, expressed	chr11	9466098	9473932	+	three_prime_UTR,CDS,downstream
3	LOC_Os04g40080	leucine rich repeat containing protein, expressed	gene	leucine rich repeat containing protein, expressed	chr4	23679007	23682180	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g19340	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr3	10865216	10881763	-	CDS
3	LOC_Os10g19190	vesicle transport protein GOT1B, putative, expressed	gene	vesicle transport protein GOT1B, putative, expressed	chr10	9705797	9710450	-	CDS
3	LOC_Os02g55940	ribosomal protein S15 containing protein, expressed	gene	ribosomal protein S15 containing protein, expressed	chr2	34233060	34236233	+	three_prime_UTR
3	LOC_Os10g35450	serine/threonine-protein kinase, putative, expressed	gene	serine/threonine-protein kinase, putative, expressed	chr10	18899047	18903787	+	CDS,three_prime_UTR
3	LOC_Os08g33350	expressed protein	gene	expressed protein	chr8	20799763	20802487	-	CDS,promoter
3	LOC_Os07g05470	AIR9 protein, putative, expressed	gene	AIR9 protein, putative, expressed	chr7	2538294	2544734	+	CDS
3	LOC_Os04g44560	expressed protein	gene	expressed protein	chr4	26190577	26194946	+	CDS,three_prime_UTR,promoter
3	LOC_Os07g45280	Mo25, putative, expressed	gene	Mo25, putative, expressed	chr7	27013197	27018015	+	CDS,three_prime_UTR
3	LOC_Os02g14720	expressed protein	gene	expressed protein	chr2	8114960	8121924	+	CDS
3	LOC_Os03g22560	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr3	12960121	12964738	-	CDS,promoter
3	LOC_Os07g48430	nucleoside-triphosphatase, putative, expressed	gene	nucleoside-triphosphatase, putative, expressed	chr7	28962035	28966294	+	CDS,three_prime_UTR
3	LOC_Os08g10740	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr8	6318166	6323381	+	three_prime_UTR
3	LOC_Os02g05680	apoptosis-inducing factor 2, putative, expressed	gene	apoptosis-inducing factor 2, putative, expressed	chr2	2776405	2779384	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os01g54510	MAC/Perforin domain containing protein, putative, expressed	gene	MAC/Perforin domain containing protein, putative, expressed	chr1	31348568	31352117	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g41760	conserved hypothetical protein	gene	conserved hypothetical protein	chr12	25839963	25841948	-	CDS
3	LOC_Os08g34740	SGT1 protein, putative, expressed	gene	SGT1 protein, putative, expressed	chr8	21832329	21837885	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g51164	expressed protein	gene	expressed protein	chr2	31300465	31301918	+	five_prime_UTR,promoter,downstream
3	LOC_Os10g05530	OsFBX372 - F-box domain containing protein, expressed	gene	OsFBX372 - F-box domain containing protein, expressed	chr10	2736020	2740842	-	three_prime_UTR
3	LOC_Os08g08220	EDA16, putative, expressed	gene	EDA16, putative, expressed	chr8	4699665	4707413	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g35190	chloride channel protein, putative, expressed	gene	chloride channel protein, putative, expressed	chr2	21144834	21155502	-	CDS
3	LOC_Os02g34080	myosin, putative, expressed	gene	myosin, putative, expressed	chr2	20363499	20385770	+	CDS
3	LOC_Os01g66720	NADP-dependent oxidoreductase, putative, expressed	gene	NADP-dependent oxidoreductase, putative, expressed	chr1	38751568	38753927	+	CDS,downstream
3	LOC_Os08g07440	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr8	4174875	4177552	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g08530	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr2	4604009	4607663	-	CDS
3	LOC_Os03g49230	acetyltransferase, GNAT family, putative, expressed	gene	acetyltransferase, GNAT family, putative, expressed	chr3	28032400	28035432	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g40270	alpha-1,4-glucan-protein synthase, putative, expressed	gene	alpha-1,4-glucan-protein synthase, putative, expressed	chr3	22379809	22382422	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g29409	tRNA methyltransferase, putative, expressed	gene	tRNA methyltransferase, putative, expressed	chr1	16479337	16493309	+	CDS,three_prime_UTR
3	LOC_Os10g07340	expressed protein	gene	expressed protein	chr10	3867216	3870272	+	three_prime_UTR
3	LOC_Os12g42044	OsWAK127b - OsWAK short gene, expressed	gene	OsWAK127b - OsWAK short gene, expressed	chr12	26048058	26053235	-	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os03g19570	fip1 motif family protein, expressed	gene	fip1 motif family protein, expressed	chr3	10997718	11005098	-	CDS,promoter,downstream
3	LOC_Os03g06940	beta-galactosidase, putative, expressed	gene	beta-galactosidase, putative, expressed	chr3	3524074	3530353	-	CDS
3	LOC_Os12g07950	transcriptional regulator Sir2 family protein, putative, expressed	gene	transcriptional regulator Sir2 family protein, putative, expressed	chr12	4031200	4035956	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g21470	expressed protein	gene	expressed protein	chr9	12976782	12979465	-	three_prime_UTR,promoter
3	LOC_Os06g38730	receptor-like protein kinase precursor, putative, expressed	gene	receptor-like protein kinase precursor, putative, expressed	chr6	22991414	22994906	+	CDS,promoter
3	LOC_Os05g07680	KIP1, putative, expressed	gene	KIP1, putative, expressed	chr5	4129157	4134200	-	five_prime_UTR,CDS
3	LOC_Os10g29502	expressed protein	gene	expressed protein	chr10	15255442	15259105	+	CDS,three_prime_UTR
3	LOC_Os08g02210	expressed protein	gene	expressed protein	chr8	750274	752264	+	three_prime_UTR
3	LOC_Os06g01460	expressed protein	gene	expressed protein	chr6	275707	281180	-	CDS,three_prime_UTR
3	LOC_Os04g08350	cysteine synthase, chloroplast/chromoplast precursor, putative, expressed	gene	cysteine synthase, chloroplast/chromoplast precursor, putative, expressed	chr4	4453004	4457449	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g38990	OsWRKY30 - Superfamily of TFs having WRKY and zinc finger domains, expressed	gene	OsWRKY30 - Superfamily of TFs having WRKY and zinc finger domains, expressed	chr8	24643146	24647146	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g65350	deoxynucleoside kinase family, putative, expressed	gene	deoxynucleoside kinase family, putative, expressed	chr1	37913714	37917955	-	three_prime_UTR,CDS
3	LOC_Os12g42380	expressed protein	gene	expressed protein	chr12	26305856	26308219	-	CDS,promoter
3	LOC_Os02g33149	OR, putative, expressed	gene	OR, putative, expressed	chr2	19709002	19711814	-	CDS
3	LOC_Os09g39400	histidine-containing phosphotransfer protein, putative, expressed	gene	histidine-containing phosphotransfer protein, putative, expressed	chr9	22653368	22656565	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g58630	pentatricopeptide repeat, putative, expressed	gene	pentatricopeptide repeat, putative, expressed	chr1	33892663	33894955	+	three_prime_UTR
3	LOC_Os11g38800	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr11	22599816	22606695	+	CDS
3	LOC_Os01g50930	expressed protein	gene	expressed protein	chr1	29239019	29245832	-	three_prime_UTR,CDS,downstream
3	LOC_Os03g17510	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr3	9729350	9731909	-	three_prime_UTR,promoter,downstream
3	LOC_Os09g03610	flowering time control protein FCA, putative, expressed	gene	flowering time control protein FCA, putative, expressed	chr9	1789446	1798611	+	CDS,three_prime_UTR
3	LOC_Os07g42080	expressed protein	gene	expressed protein	chr7	25191306	25193956	+	three_prime_UTR,downstream
3	LOC_Os04g48730	expressed protein	gene	expressed protein	chr4	28880739	28884071	+	CDS,three_prime_UTR
3	LOC_Os05g02940	calcium-transporting ATPase 2, endoplasmic reticulum-type, putative, expressed	gene	calcium-transporting ATPase 2, endoplasmic reticulum-type, putative, expressed	chr5	1083889	1086151	+	CDS,three_prime_UTR,five_prime_UTR,promoter
3	LOC_Os01g39100	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	gene	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	chr1	21972642	21979437	+	CDS
3	LOC_Os04g08310	expressed protein	gene	expressed protein	chr4	4432460	4437261	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g03020	ZOS5-03 - C2H2 zinc finger protein, expressed	gene	ZOS5-03 - C2H2 zinc finger protein, expressed	chr5	1142011	1145736	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g30484	ZOS11-03 - C2H2 zinc finger protein, expressed	gene	ZOS11-03 - C2H2 zinc finger protein, expressed	chr11	17255936	17259298	+	CDS
3	LOC_Os01g70740	expressed protein	gene	expressed protein	chr1	40946028	40948550	-	three_prime_UTR
3	LOC_Os08g42640	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr8	26945858	26950801	+	CDS,three_prime_UTR
3	LOC_Os02g06120	Leucine Rich Repeat family protein	gene	Leucine Rich Repeat family protein	chr2	3048519	3055297	-	CDS,downstream
3	LOC_Os05g13950	eukaryotic translation initiation factor 3 subunit E-interacting protein, putative, expressed	gene	eukaryotic translation initiation factor 3 subunit E-interacting protein, putative, expressed	chr5	7762016	7768267	-	CDS,downstream
3	LOC_Os04g51786	containing DUF163, putative, expressed	gene	containing DUF163, putative, expressed	chr4	30500297	30502736	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os11g33240	citrate synthase, putative, expressed	gene	citrate synthase, putative, expressed	chr11	19182997	19189668	+	CDS,three_prime_UTR
3	LOC_Os09g38700	STRUBBELIG-RECEPTOR FAMILY 5 precursor, putative, expressed	gene	STRUBBELIG-RECEPTOR FAMILY 5 precursor, putative, expressed	chr9	22243412	22248821	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g55030	DNA-binding protein-related, putative, expressed	gene	DNA-binding protein-related, putative, expressed	chr1	31637545	31639441	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g50220	expressed protein	gene	expressed protein	chr6	30407648	30413578	+	CDS
3	LOC_Os06g33250	crooked neck, putative, expressed	gene	crooked neck, putative, expressed	chr6	19356235	19359928	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g32210	NAD kinase, putative, expressed	gene	NAD kinase, putative, expressed	chr5	18717177	18724304	+	CDS
3	LOC_Os09g36190	glycosyl transferase family 8, putative, expressed	gene	glycosyl transferase family 8, putative, expressed	chr9	20861992	20866280	-	CDS,three_prime_UTR
3	LOC_Os11g40510	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr11	23704511	23709491	-	CDS
3	LOC_Os01g68490	tetratricopeptide-like helical, putative, expressed	gene	tetratricopeptide-like helical, putative, expressed	chr1	39793183	39798298	-	three_prime_UTR
3	LOC_Os11g29230	pentatricopeptide repeat protein PPR986-12, putative, expressed	gene	pentatricopeptide repeat protein PPR986-12, putative, expressed	chr11	16478376	16481585	+	CDS,three_prime_UTR
3	LOC_Os02g26560	expressed protein	gene	expressed protein	chr2	15589114	15592265	+	CDS,three_prime_UTR
3	LOC_Os02g50100	SET domain-containing protein, putative, expressed	gene	SET domain-containing protein, putative, expressed	chr2	30587626	30590354	+	CDS,three_prime_UTR
3	LOC_Os10g04860	aldehyde oxidase, putative, expressed	gene	aldehyde oxidase, putative, expressed	chr10	2357767	2367709	+	CDS
3	LOC_Os08g42730	radical SAM enzyme, putative, expressed	gene	radical SAM enzyme, putative, expressed	chr8	27032215	27036145	+	CDS,three_prime_UTR
3	LOC_Os01g21450	expressed protein	gene	expressed protein	chr1	11973103	11980933	+	CDS,three_prime_UTR,promoter
3	LOC_Os10g04600	OsFBX359 - F-box domain containing protein, expressed	gene	OsFBX359 - F-box domain containing protein, expressed	chr10	2190931	2193580	+	three_prime_UTR,downstream
3	LOC_Os11g26910	SKP1-like protein 1B, putative, expressed	gene	SKP1-like protein 1B, putative, expressed	chr11	14995771	14998678	+	CDS,three_prime_UTR
3	LOC_Os09g30150	AGC_PVPK_like_kin82y.16 - ACG kinases include homologs to PKA, PKG and PKC, expressed	gene	AGC_PVPK_like_kin82y.16 - ACG kinases include homologs to PKA, PKG and PKC, expressed	chr9	18338633	18342613	+	CDS,three_prime_UTR
3	LOC_Os03g01250	expressed protein	gene	expressed protein	chr3	168854	174129	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g38590	pumilio-family RNA binding repeat containing protein, expressed	gene	pumilio-family RNA binding repeat containing protein, expressed	chr12	23669895	23679360	+	CDS
3	LOC_Os12g10180	NBS-LRR type disease resistance protein Rps1-k-2, putative, expressed	gene	NBS-LRR type disease resistance protein Rps1-k-2, putative, expressed	chr12	5375852	5382028	-	CDS
3	LOC_Os08g04170	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	gene	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	chr8	2018184	2025646	+	CDS,three_prime_UTR
3	LOC_Os05g37170	transcription factor, putative, expressed	gene	transcription factor, putative, expressed	chr5	21653158	21662007	+	CDS,five_prime_UTR
3	LOC_Os11g03734	alpha-N-arabinofuranosidase A precursor, putative, expressed	gene	alpha-N-arabinofuranosidase A precursor, putative, expressed	chr11	1461153	1466643	+	CDS,three_prime_UTR
3	LOC_Os07g07280	expressed protein	gene	expressed protein	chr7	3615171	3617203	+	CDS,three_prime_UTR
3	LOC_Os07g02630	expressed protein	gene	expressed protein	chr7	949862	952907	-	CDS
3	LOC_Os08g06470	transmembrane 9 superfamily member, putative, expressed	gene	transmembrane 9 superfamily member, putative, expressed	chr8	3629961	3634524	+	three_prime_UTR,downstream
3	LOC_Os07g04170	OsMADS90 - MADS-box family gene with M-beta type-box, expressed	gene	OsMADS90 - MADS-box family gene with M-beta type-box, expressed	chr7	1780626	1784427	+	five_prime_UTR,CDS,promoter
3	LOC_Os01g32660	STE_MEK_ste7_MAP2K.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	gene	STE_MEK_ste7_MAP2K.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	chr1	17903729	17909128	+	CDS,three_prime_UTR
3	LOC_Os02g45170	helix-loop-helix DNA-binding protein, putative, expressed	gene	helix-loop-helix DNA-binding protein, putative, expressed	chr2	27410657	27416092	+	CDS
3	LOC_Os07g14514	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr7	8263776	8277973	-	CDS,three_prime_UTR
3	LOC_Os04g48820	deoxyribonuclease tatD, putative, expressed	gene	deoxyribonuclease tatD, putative, expressed	chr4	28929803	28934526	-	CDS,three_prime_UTR
3	LOC_Os03g06720	expressed protein	gene	expressed protein	chr3	3416320	3423864	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g11820	GTPase-activating protein, putative, expressed	gene	GTPase-activating protein, putative, expressed	chr2	6110092	6118738	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g42110	semialdehyde dehydrogenase, NAD binding domain containing protein, putative, expressed	gene	semialdehyde dehydrogenase, NAD binding domain containing protein, putative, expressed	chr3	23436331	23440511	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g20520	endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed	gene	endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed	chr3	11620640	11626621	-	CDS,downstream
3	LOC_Os12g39620	disease resistance protein, putative, expressed	gene	disease resistance protein, putative, expressed	chr12	24421410	24426278	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g05710	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr8	3060869	3066861	+	CDS,promoter
3	LOC_Os01g47540	NLI interacting factor-like phosphatase, putative, expressed	gene	NLI interacting factor-like phosphatase, putative, expressed	chr1	27177637	27182798	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g15410	expressed protein	gene	expressed protein	chr3	8428248	8432469	+	CDS,three_prime_UTR
3	LOC_Os01g39800	esterase, putative, expressed	gene	esterase, putative, expressed	chr1	22445165	22448774	-	CDS,three_prime_UTR
3	LOC_Os04g51060	expressed protein	gene	expressed protein	chr4	30039360	30045380	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g21540	TKL_IRAK_CrRLK1L-1.8 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed	gene	TKL_IRAK_CrRLK1L-1.8 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed	chr3	12307324	12310587	+	three_prime_UTR,promoter,downstream
3	LOC_Os03g22540	jmjC domain containing protein, expressed	gene	jmjC domain containing protein, expressed	chr3	12944278	12951361	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g47340	glycosyltransferase family 43 protein, putative, expressed	gene	glycosyltransferase family 43 protein, putative, expressed	chr6	28693853	28697505	+	CDS,three_prime_UTR,promoter
3	LOC_Os06g45370	fructose-1,6-bisphosphatase, putative, expressed	gene	fructose-1,6-bisphosphatase, putative, expressed	chr6	27427890	27430111	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g19620	SFT2, putative, expressed	gene	SFT2, putative, expressed	chr6	11183910	11188424	-	three_prime_UTR,CDS
3	LOC_Os01g33090	expressed protein	gene	expressed protein	chr1	18204131	18207175	+	CDS,downstream
3	LOC_Os05g32600	cyclin-dependent kinase D-1, putative, expressed	gene	cyclin-dependent kinase D-1, putative, expressed	chr5	19021375	19027389	+	CDS,three_prime_UTR,promoter
3	LOC_Os07g47490	OsGH3.11 - Probable indole-3-acetic acid-amido synthetase, expressed	gene	OsGH3.11 - Probable indole-3-acetic acid-amido synthetase, expressed	chr7	28390706	28399315	-	CDS,three_prime_UTR
3	LOC_Os11g34350	ATP-binding cassette sub-family E member 1, putative, expressed	gene	ATP-binding cassette sub-family E member 1, putative, expressed	chr11	19662909	19668267	+	CDS,three_prime_UTR
3	LOC_Os02g36490	expressed protein	gene	expressed protein	chr2	22032735	22036152	-	CDS,three_prime_UTR
3	LOC_Os03g26360	expressed protein	gene	expressed protein	chr3	15069459	15073935	+	five_prime_UTR,CDS,promoter
3	LOC_Os03g10080	expressed protein	gene	expressed protein	chr3	5084626	5089355	-	CDS,three_prime_UTR
3	LOC_Os10g35990	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr10	19164919	19170486	-	CDS,three_prime_UTR
3	LOC_Os01g37500	hypothetical protein	gene	hypothetical protein	chr1	20951041	20952251	+	CDS,promoter
3	LOC_Os06g01650	expressed protein	gene	expressed protein	chr6	386203	392012	-	CDS,three_prime_UTR
3	LOC_Os05g38810	PWWP domain containing protein, expressed	gene	PWWP domain containing protein, expressed	chr5	22701884	22706777	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g27870	expressed protein	gene	expressed protein	chr2	16487690	16496351	-	CDS,five_prime_UTR
3	LOC_Os03g38520	expressed protein	gene	expressed protein	chr3	21376647	21380743	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g13940	expressed protein	gene	expressed protein	chr1	7805630	7809972	-	CDS,three_prime_UTR
3	LOC_Os08g44810	lactate/malate dehydrogenase, putative, expressed	gene	lactate/malate dehydrogenase, putative, expressed	chr8	28138328	28143556	+	CDS,three_prime_UTR
3	LOC_Os07g10540	peptidase, M24 family protein, putative, expressed	gene	peptidase, M24 family protein, putative, expressed	chr7	5690880	5698884	-	CDS
3	LOC_Os10g26140	CPuORF15 - conserved peptide uORF-containing transcript, expressed	gene	CPuORF15 - conserved peptide uORF-containing transcript, expressed	chr10	13472178	13480993	+	CDS,three_prime_UTR
3	LOC_Os02g18840	phosphatidylinositol 3- and 4-kinase family protein, putative, expressed	gene	phosphatidylinositol 3- and 4-kinase family protein, putative, expressed	chr2	10994200	10997635	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g33720	disease resistance protein, putative, expressed	gene	disease resistance protein, putative, expressed	chr7	20156467	20159911	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g55500	expressed protein	gene	expressed protein	chr4	32821210	32827888	+	CDS,three_prime_UTR
3	LOC_Os10g03680	hypothetical protein	gene	hypothetical protein	chr10	1645965	1649042	-	CDS,promoter
3	LOC_Os04g39210	agmatine deiminase, putative, expressed	gene	agmatine deiminase, putative, expressed	chr4	23129971	23133877	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g46310	metal transporter Nramp6, putative, expressed	gene	metal transporter Nramp6, putative, expressed	chr6	28058356	28064182	-	CDS,three_prime_UTR
3	LOC_Os02g49150	RNA polymerase Rpb4, putative, expressed	gene	RNA polymerase Rpb4, putative, expressed	chr2	30047595	30052674	-	CDS
3	LOC_Os03g08870	expressed protein	gene	expressed protein	chr3	4595021	4597262	+	CDS,promoter
3	LOC_Os01g73120	expressed protein	gene	expressed protein	chr1	42412294	42415546	-	CDS
3	LOC_Os10g43075	expressed protein	gene	expressed protein	chr10	23124212	23134516	-	CDS,three_prime_UTR
3	LOC_Os04g08410	ELM2 domain containing protein, putative, expressed	gene	ELM2 domain containing protein, putative, expressed	chr4	4504408	4509487	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g35560	kelch repeat protein, putative, expressed	gene	kelch repeat protein, putative, expressed	chr12	21586064	21591502	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g01090	B3 DNA binding domain containing protein, expressed	gene	B3 DNA binding domain containing protein, expressed	chr8	62574	66839	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g05140	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr6	2281573	2283864	+	CDS,downstream
3	LOC_Os04g46300	disease resistance protein RPM1, putative, expressed	gene	disease resistance protein RPM1, putative, expressed	chr4	27245706	27249493	-	CDS,promoter
3	LOC_Os11g39020	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr11	22763983	22767948	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g22894	expressed protein	gene	expressed protein	chr5	12949186	12953105	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os09g06230	serine/threonine-protein kinase 16, putative, expressed	gene	serine/threonine-protein kinase 16, putative, expressed	chr9	2913717	2919231	-	CDS
3	LOC_Os07g46180	PWWP domain containing protein, expressed	gene	PWWP domain containing protein, expressed	chr7	27554879	27566024	+	CDS,three_prime_UTR,promoter
3	LOC_Os05g22970	glyoxalase family protein, putative, expressed	gene	glyoxalase family protein, putative, expressed	chr5	13037091	13041794	-	CDS,three_prime_UTR
3	LOC_Os03g64030	receptor protein kinase, putative, expressed	gene	receptor protein kinase, putative, expressed	chr3	36177583	36179353	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g51830	ZOS5-12 - C2H2 zinc finger protein, expressed	gene	ZOS5-12 - C2H2 zinc finger protein, expressed	chr5	29690716	29693680	-	CDS,downstream
3	LOC_Os06g15990	aldehyde dehydrogenase, putative, expressed	gene	aldehyde dehydrogenase, putative, expressed	chr6	9090017	9095680	+	CDS
3	LOC_Os05g48855	GTP binding protein, putative, expressed	gene	GTP binding protein, putative, expressed	chr5	27942400	27944410	-	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os10g42700	CS domain containing protein, putative, expressed	gene	CS domain containing protein, putative, expressed	chr10	22960679	22963571	+	CDS,promoter,downstream
3	LOC_Os09g24954	double-stranded RNA binding motif containing protein, expressed	gene	double-stranded RNA binding motif containing protein, expressed	chr9	14895146	14900414	+	CDS,three_prime_UTR
3	LOC_Os10g18700	hypothetical protein	gene	hypothetical protein	chr10	9430619	9433872	+	CDS
3	LOC_Os03g01014	expressed protein	gene	expressed protein	chr3	12193	15729	+	CDS
3	LOC_Os09g34847	expressed protein	gene	expressed protein	chr9	20305341	20307858	+	three_prime_UTR,downstream
3	LOC_Os11g43510	lipase precursor, putative, expressed	gene	lipase precursor, putative, expressed	chr11	25792139	25795569	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g06490	STE_PAK_Ste20_Slob_Wnk.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	gene	STE_PAK_Ste20_Slob_Wnk.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	chr12	3127501	3130910	-	CDS,three_prime_UTR
3	LOC_Os12g34920	csAtPR5, putative, expressed	gene	csAtPR5, putative, expressed	chr12	21220560	21223932	+	CDS
3	LOC_Os09g31506	dihydroflavonol-4-reductase, putative, expressed	gene	dihydroflavonol-4-reductase, putative, expressed	chr9	19014610	19017754	-	CDS
3	LOC_Os08g29530	double-stranded RNA binding motif containing protein, expressed	gene	double-stranded RNA binding motif containing protein, expressed	chr8	18100548	18105647	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g22400	POLA3 - Putative DNA polymerase alpha complex subunit, expressed	gene	POLA3 - Putative DNA polymerase alpha complex subunit, expressed	chr7	12573587	12578672	-	CDS
3	LOC_Os03g12236	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr3	6420734	6425920	+	three_prime_UTR,five_prime_UTR,CDS
3	LOC_Os04g32560	ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B,chloroplast precursor, putative, expressed	gene	ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B,chloroplast precursor, putative, expressed	chr4	19429322	19435953	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g40200	Ser/Thr protein phosphatase family protein, putative, expressed	gene	Ser/Thr protein phosphatase family protein, putative, expressed	chr8	25434383	25438139	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g40860	aldehyde dehydrogenase, putative, expressed	gene	aldehyde dehydrogenase, putative, expressed	chr1	23096212	23105259	+	CDS
3	LOC_Os08g28730	NAD dependent epimerase/dehydratase family protein, putative, expressed	gene	NAD dependent epimerase/dehydratase family protein, putative, expressed	chr8	17567192	17573700	-	CDS
3	LOC_Os02g05950	phytosulfokine receptor precursor, putative, expressed	gene	phytosulfokine receptor precursor, putative, expressed	chr2	2958767	2962175	-	CDS,promoter
3	LOC_Os06g04390	expressed protein	gene	expressed protein	chr6	1875600	1879340	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g68830	expressed protein	gene	expressed protein	chr1	39990923	39994070	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g05500	zinc finger protein, putative, expressed	gene	zinc finger protein, putative, expressed	chr1	2598850	2611865	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g11950	disease resistance protein RPM1, putative, expressed	gene	disease resistance protein RPM1, putative, expressed	chr11	6627711	6630415	-	CDS,downstream
3	LOC_Os03g50510	threonine dehydratase biosynthetic, chloroplast precursor, putative, expressed	gene	threonine dehydratase biosynthetic, chloroplast precursor, putative, expressed	chr3	28832331	28837981	+	CDS,three_prime_UTR
3	LOC_Os10g42400	expressed protein	gene	expressed protein	chr10	22747691	22752388	-	CDS
3	LOC_Os02g04730	cycloartenol synthase, putative, expressed	gene	cycloartenol synthase, putative, expressed	chr2	2148473	2153358	-	CDS,three_prime_UTR
3	LOC_Os02g36380	FAD binding domain of DNA photolyase domain containing protein, expressed	gene	FAD binding domain of DNA photolyase domain containing protein, expressed	chr2	21970640	21974427	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g35410	expressed protein	gene	expressed protein	chr4	21367500	21371654	-	CDS,three_prime_UTR
3	LOC_Os09g22540	transcription factor jumonji, putative, expressed	gene	transcription factor jumonji, putative, expressed	chr9	13594421	13600888	+	CDS
3	LOC_Os01g67330	nucleotide-sugar transporter family protein, putative, expressed	gene	nucleotide-sugar transporter family protein, putative, expressed	chr1	39084038	39089986	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g07910	transmembrane 9 superfamily member, putative, expressed	gene	transmembrane 9 superfamily member, putative, expressed	chr11	4072807	4079376	+	CDS
3	LOC_Os06g23430	signal recognition particle 19 kDa protein, putative, expressed	gene	signal recognition particle 19 kDa protein, putative, expressed	chr6	13676378	13680876	-	CDS,three_prime_UTR
3	LOC_Os02g35080	T-complex protein 11, putative, expressed	gene	T-complex protein 11, putative, expressed	chr2	21048522	21057392	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g43840	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr6	26398279	26404234	+	CDS,three_prime_UTR
3	LOC_Os09g03620	wall-associated receptor kinase-like 20 precursor, putative, expressed	gene	wall-associated receptor kinase-like 20 precursor, putative, expressed	chr9	1802961	1809819	+	CDS
3	LOC_Os04g34940	protein of unknown function domain containing protein, expressed	gene	protein of unknown function domain containing protein, expressed	chr4	21060590	21063518	-	CDS,three_prime_UTR
3	LOC_Os04g33770	nucleoside-diphosphate-sugar epimerase, putative, expressed	gene	nucleoside-diphosphate-sugar epimerase, putative, expressed	chr4	20274911	20279199	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g01800	glycosyl hydrolases family 16, putative, expressed	gene	glycosyl hydrolases family 16, putative, expressed	chr3	491650	493091	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g19734	isochorismate synthase 1, chloroplast precursor, putative, expressed	gene	isochorismate synthase 1, chloroplast precursor, putative, expressed	chr9	11804570	11814327	+	CDS,three_prime_UTR
3	LOC_Os04g57780	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr4	34225319	34228081	-	three_prime_UTR,CDS,downstream
3	LOC_Os02g37120	expressed protein	gene	expressed protein	chr2	22430202	22435016	-	CDS
3	LOC_Os04g54870	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr4	32448052	32452726	-	CDS,three_prime_UTR
3	LOC_Os05g14194	glyoxalase family protein, putative, expressed	gene	glyoxalase family protein, putative, expressed	chr5	7959978	7966735	-	CDS,three_prime_UTR
3	LOC_Os03g20420	alpha-N-arabinofuranosidase A, putative, expressed	gene	alpha-N-arabinofuranosidase A, putative, expressed	chr3	11548224	11557058	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g49510	OsPOP3 - Putative Prolyl Oligopeptidase homologue, expressed	gene	OsPOP3 - Putative Prolyl Oligopeptidase homologue, expressed	chr1	28478229	28482614	+	CDS,three_prime_UTR
3	LOC_Os01g52710	glycosyl transferase 8 domain containing protein, putative, expressed	gene	glycosyl transferase 8 domain containing protein, putative, expressed	chr1	30310177	30314880	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g51030	wall-associated kinase 1, putative, expressed	gene	wall-associated kinase 1, putative, expressed	chr4	30024003	30028836	+	CDS
3	LOC_Os04g35590	thioesterase family protein, putative, expressed	gene	thioesterase family protein, putative, expressed	chr4	21523490	21526682	-	CDS,three_prime_UTR,downstream
3	LOC_Os02g30180	ZOS2-07 - C2H2 zinc finger protein, expressed	gene	ZOS2-07 - C2H2 zinc finger protein, expressed	chr2	17924817	17930547	+	CDS
3	LOC_Os01g26130	expressed protein	gene	expressed protein	chr1	14798274	14800906	+	three_prime_UTR,downstream
3	LOC_Os04g24410	kinesin heavy chain isolog, putative, expressed	gene	kinesin heavy chain isolog, putative, expressed	chr4	13979864	13988305	-	CDS
3	LOC_Os01g64820	POLA1 - Putative DNA polymerase alpha catalytic subunit, expressed	gene	POLA1 - Putative DNA polymerase alpha catalytic subunit, expressed	chr1	37624752	37634991	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g01550	OsFBL6 - F-box domain and LRR containing protein, expressed	gene	OsFBL6 - F-box domain and LRR containing protein, expressed	chr2	311537	316458	-	CDS,promoter,downstream
3	LOC_Os03g59160	elongation factor P, putative, expressed	gene	elongation factor P, putative, expressed	chr3	33681144	33685118	-	CDS,promoter
3	LOC_Os06g29630	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr6	16990723	16993088	-	CDS,three_prime_UTR
3	LOC_Os06g51290	phytoene synthase, chloroplast precursor, putative, expressed	gene	phytoene synthase, chloroplast precursor, putative, expressed	chr6	31050973	31054928	-	CDS
3	LOC_Os02g56270	ENTH domain containing protein, expressed	gene	ENTH domain containing protein, expressed	chr2	34422526	34428326	-	CDS
3	LOC_Os07g41720	nuclear transcription factor Y subunit, putative, expressed	gene	nuclear transcription factor Y subunit, putative, expressed	chr7	24995730	25000226	-	CDS,promoter
3	LOC_Os03g44580	DNA binding protein, putative, expressed	gene	DNA binding protein, putative, expressed	chr3	25099861	25102691	-	three_prime_UTR,promoter
3	LOC_Os10g42090	AGAP003819-PA, putative, expressed	gene	AGAP003819-PA, putative, expressed	chr10	22564559	22568580	+	three_prime_UTR,CDS
3	LOC_Os02g34580	ammonium transporter protein, putative, expressed	gene	ammonium transporter protein, putative, expressed	chr2	20728208	20731463	+	five_prime_UTR,promoter
3	LOC_Os01g08960	phosducin-like protein 3, putative, expressed	gene	phosducin-like protein 3, putative, expressed	chr1	4493598	4496627	-	CDS,three_prime_UTR
3	LOC_Os01g70810	homeobox domain containing protein, expressed	gene	homeobox domain containing protein, expressed	chr1	40983393	40991927	+	CDS,promoter
3	LOC_Os02g58480	sucrose synthase, putative, expressed	gene	sucrose synthase, putative, expressed	chr2	35749077	35755912	+	five_prime_UTR,CDS,promoter
3	LOC_Os07g05720	TCP family transcription factor, putative, expressed	gene	TCP family transcription factor, putative, expressed	chr7	2750214	2755701	+	three_prime_UTR,downstream
3	LOC_Os04g53200	exonuclease, putative, expressed	gene	exonuclease, putative, expressed	chr4	31493800	31498837	-	CDS,three_prime_UTR
3	LOC_Os08g02050	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr8	661168	666559	-	CDS,three_prime_UTR
3	LOC_Os01g32640	OsFBX9 - F-box domain containing protein, expressed	gene	OsFBX9 - F-box domain containing protein, expressed	chr1	17893866	17897564	+	CDS,three_prime_UTR
3	LOC_Os10g32030	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr10	16755361	16760181	-	CDS
3	LOC_Os08g30040	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr8	18459828	18462851	+	CDS
3	LOC_Os08g35710	expressed protein	gene	expressed protein	chr8	22527327	22529766	-	three_prime_UTR
3	LOC_Os08g10604	pectinesterase, putative, expressed	gene	pectinesterase, putative, expressed	chr8	6241164	6242728	-	five_prime_UTR,CDS,promoter,downstream
3	LOC_Os06g15420	asparagine synthetase, putative, expressed	gene	asparagine synthetase, putative, expressed	chr6	8757770	8764754	-	CDS,three_prime_UTR
3	LOC_Os11g44330	expressed protein	gene	expressed protein	chr11	26318911	26321908	-	CDS,three_prime_UTR
3	LOC_Os01g26000	expressed protein	gene	expressed protein	chr1	14741658	14747126	-	CDS
3	LOC_Os08g37960	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr8	24037435	24040588	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g50390	AGC_AGC_other_GWLd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed	gene	AGC_AGC_other_GWLd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed	chr3	28743097	28755351	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g13980	glucose-1-phosphate adenylyltransferase large subunit, putative, expressed	gene	glucose-1-phosphate adenylyltransferase large subunit, putative, expressed	chr7	7981506	7988288	-	CDS,three_prime_UTR
3	LOC_Os02g27340	riboflavin biosynthesis protein ribD, putative, expressed	gene	riboflavin biosynthesis protein ribD, putative, expressed	chr2	16098748	16104465	-	CDS
3	LOC_Os05g08790	MAR-binding filament-like protein 1, putative, expressed	gene	MAR-binding filament-like protein 1, putative, expressed	chr5	4831822	4835626	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g53140	expressed protein	gene	expressed protein	chr1	30532565	30535864	+	CDS,promoter
3	LOC_Os01g59440	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	gene	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	chr1	34378053	34382041	+	CDS,three_prime_UTR
3	LOC_Os02g03610	ADP-ribosylation factor, putative, expressed	gene	ADP-ribosylation factor, putative, expressed	chr2	1476335	1480287	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g51320	transcription factor TF2, putative, expressed	gene	transcription factor TF2, putative, expressed	chr4	30208059	30210653	-	CDS,three_prime_UTR,downstream
3	LOC_Os02g47650	universal stress protein domain containing protein, putative, expressed	gene	universal stress protein domain containing protein, putative, expressed	chr2	29107571	29111305	+	CDS,promoter
3	LOC_Os03g56830	ad-003, putative, expressed	gene	ad-003, putative, expressed	chr3	32372797	32376692	-	CDS,downstream
3	LOC_Os08g30060	proton pump interactor, putative, expressed	gene	proton pump interactor, putative, expressed	chr8	18471454	18478139	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g42540	expressed protein	gene	expressed protein	chr10	22867427	22869549	+	three_prime_UTR,downstream
3	LOC_Os01g34480	NAD dependent epimerase/dehydratase family protein, putative, expressed	gene	NAD dependent epimerase/dehydratase family protein, putative, expressed	chr1	19008663	19013140	+	CDS,three_prime_UTR
3	LOC_Os02g39560	non-receptor tyrosine kinase spore lysis A, putative, expressed	gene	non-receptor tyrosine kinase spore lysis A, putative, expressed	chr2	23870622	23875833	-	CDS
3	LOC_Os12g12170	cytochrome b5-like Heme/Steroid binding domain containing protein, expressed	gene	cytochrome b5-like Heme/Steroid binding domain containing protein, expressed	chr12	6676547	6678820	+	three_prime_UTR,downstream
3	LOC_Os01g07070	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr1	3321774	3327256	+	three_prime_UTR,downstream
3	LOC_Os08g04270	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr8	2076237	2082330	+	CDS,three_prime_UTR
3	LOC_Os03g06715	unknown	gene	unknown	chr3	3413477	3415714	+	five_prime_UTR,CDS
3	LOC_Os01g15630	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr1	8785512	8791386	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g73310	actin, putative, expressed	gene	actin, putative, expressed	chr1	42483029	42486407	-	CDS
3	LOC_Os02g02350	OsFBK2 - F-box domain and kelch repeat containing protein, expressed	gene	OsFBK2 - F-box domain and kelch repeat containing protein, expressed	chr2	780642	785676	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g43020	heat shock protein STI, putative, expressed	gene	heat shock protein STI, putative, expressed	chr2	25889585	25894062	+	CDS,three_prime_UTR,promoter
3	LOC_Os08g34950	chaperonin Cpn60/TCP-1, putative, expressed	gene	chaperonin Cpn60/TCP-1, putative, expressed	chr8	21998414	22009168	+	CDS,three_prime_UTR
3	LOC_Os03g63430	proteasome subunit, putative, expressed	gene	proteasome subunit, putative, expressed	chr3	35826843	35830877	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g12664	expressed protein	gene	expressed protein	chr12	6975799	6980990	-	three_prime_UTR
3	LOC_Os01g37470	asp/Glu racemase, putative, expressed	gene	asp/Glu racemase, putative, expressed	chr1	20937287	20940312	-	three_prime_UTR,downstream
3	LOC_Os07g47300	spo0B-associated GTP-binding protein, putative, expressed	gene	spo0B-associated GTP-binding protein, putative, expressed	chr7	28276528	28280071	+	CDS,three_prime_UTR
3	LOC_Os08g18150	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr8	11125806	11129618	-	CDS
3	LOC_Os02g10290	copper-transporting ATPase, putative, expressed	gene	copper-transporting ATPase, putative, expressed	chr2	5404703	5410764	+	CDS
3	LOC_Os02g06570	CAMK_KIN1/SNF1/Nim1_like.13 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_KIN1/SNF1/Nim1_like.13 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr2	3283210	3286406	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g66379	expressed protein	gene	expressed protein	chr1	38544536	38557338	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g37984	amino acid permease family protein, putative, expressed	gene	amino acid permease family protein, putative, expressed	chr3	21090447	21095519	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g48300	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr6	29207088	29209949	-	CDS,downstream
3	LOC_Os07g14090	domain of unknown function domain containing protein, expressed	gene	domain of unknown function domain containing protein, expressed	chr7	8036510	8041911	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g08110	expressed protein	gene	expressed protein	chr11	4248346	4251849	+	three_prime_UTR,promoter,downstream
3	LOC_Os03g14040	expressed protein	gene	expressed protein	chr3	7614856	7617866	+	three_prime_UTR
3	LOC_Os05g40320	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr5	23630248	23634816	+	CDS,three_prime_UTR
3	LOC_Os09g15420	NAD dependent epimerase/dehydratase family protein, putative, expressed	gene	NAD dependent epimerase/dehydratase family protein, putative, expressed	chr9	9436666	9441552	-	CDS,three_prime_UTR,downstream
3	LOC_Os02g31100	LITAF-domain-containing protein, putative, expressed	gene	LITAF-domain-containing protein, putative, expressed	chr2	18586647	18590540	-	CDS,three_prime_UTR
3	LOC_Os02g13965	lectin protein kinase family protein, putative, expressed	gene	lectin protein kinase family protein, putative, expressed	chr2	7618738	7621248	+	CDS,promoter
3	LOC_Os08g01070	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr8	53040	57330	+	CDS,promoter
3	LOC_Os06g49450	expressed protein	gene	expressed protein	chr6	29960038	29966491	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g16600	expressed protein	gene	expressed protein	chr1	9423532	9428172	+	CDS
3	LOC_Os01g49890	threonine synthase, chloroplast precursor, putative, expressed	gene	threonine synthase, chloroplast precursor, putative, expressed	chr1	28652918	28654903	-	three_prime_UTR,promoter,downstream
3	LOC_Os12g05590	RCN3  Centroradialis-like1 homogous to TFL1  gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed	gene	RCN3  Centroradialis-like1 homogous to TFL1  gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed	chr12	2564215	2565564	-	three_prime_UTR,promoter,downstream
3	LOC_Os01g53800	glutamate carboxypeptidase 2, putative, expressed	gene	glutamate carboxypeptidase 2, putative, expressed	chr1	30921725	30926382	-	CDS,three_prime_UTR
3	LOC_Os09g12270	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	chr9	6989893	6993473	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g53560	phosphoesterase, putative, expressed	gene	phosphoesterase, putative, expressed	chr1	30752175	30760175	+	CDS
3	LOC_Os03g49710	ribosomal protein S13p/S18e, putative, expressed	gene	ribosomal protein S13p/S18e, putative, expressed	chr3	28294342	28296300	+	three_prime_UTR,promoter,downstream
3	LOC_Os08g07790	CRS2-associated factor 2, mitochondrial precursor, putative, expressed	gene	CRS2-associated factor 2, mitochondrial precursor, putative, expressed	chr8	4362358	4364522	+	CDS,three_prime_UTR
3	LOC_Os04g41500	expressed protein	gene	expressed protein	chr4	24426207	24430038	+	CDS
3	LOC_Os02g26940	vegetative storage protein, putative, expressed	gene	vegetative storage protein, putative, expressed	chr2	15815608	15820107	-	three_prime_UTR
3	LOC_Os05g03610	phospholipase C, putative, expressed	gene	phospholipase C, putative, expressed	chr5	1535692	1541555	+	CDS,three_prime_UTR
3	LOC_Os07g22390	ankyrin repeat domain containing protein, expressed	gene	ankyrin repeat domain containing protein, expressed	chr7	12564825	12569201	+	three_prime_UTR
3	LOC_Os11g11070	mRNA-capping enzyme, putative, expressed	gene	mRNA-capping enzyme, putative, expressed	chr11	6110546	6123321	-	three_prime_UTR,CDS,promoter
3	LOC_Os12g41220	ubiquitin-conjugating enzyme, putative, expressed	gene	ubiquitin-conjugating enzyme, putative, expressed	chr12	25525210	25527495	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g30740	mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	gene	mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	chr4	18199647	18203601	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g48980	GPI transamidase component family protein, putative, expressed	gene	GPI transamidase component family protein, putative, expressed	chr1	28117011	28122264	-	CDS,three_prime_UTR
3	LOC_Os08g38980	chloride transporter, chloride channel family, putative, expressed	gene	chloride transporter, chloride channel family, putative, expressed	chr8	24636296	24642903	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os08g42010	nodulin, putative, expressed	gene	nodulin, putative, expressed	chr8	26534958	26540211	+	CDS,three_prime_UTR
3	LOC_Os03g62539	hypothetical protein	gene	hypothetical protein	chr3	35403292	35405491	+	CDS
3	LOC_Os03g48370	disease resistance RPP13-like protein 1, putative, expressed	gene	disease resistance RPP13-like protein 1, putative, expressed	chr3	27529787	27536134	+	CDS
3	LOC_Os09g10000	expressed protein	gene	expressed protein	chr9	5444591	5449231	-	CDS,three_prime_UTR
3	LOC_Os02g26850	rRNA-processing protein FCF, putative, expressed	gene	rRNA-processing protein FCF, putative, expressed	chr2	15756235	15760010	-	CDS,three_prime_UTR
3	LOC_Os04g52960	nucleolin, putative, expressed	gene	nucleolin, putative, expressed	chr4	31359023	31366140	+	CDS
3	LOC_Os03g51984	differentiation protein, putative, expressed	gene	differentiation protein, putative, expressed	chr3	29821740	29824718	+	CDS
3	LOC_Os01g33000	expressed protein	gene	expressed protein	chr1	18123883	18127848	+	CDS,three_prime_UTR
3	LOC_Os06g11440	transposon protein, putative, Mutator sub-class, expressed	gene	transposon protein, putative, Mutator sub-class, expressed	chr6	6035699	6049763	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g34880	zinc finger, C3HC4 type family protein, expressed	gene	zinc finger, C3HC4 type family protein, expressed	chr5	20658935	20663493	-	CDS,three_prime_UTR
3	LOC_Os01g16680	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr1	9469106	9474165	+	CDS,three_prime_UTR
3	LOC_Os03g24180	pleckstrin homology domain-containing protein, putative, expressed	gene	pleckstrin homology domain-containing protein, putative, expressed	chr3	13726043	13737569	-	CDS
3	LOC_Os05g01230	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr5	155313	160214	+	three_prime_UTR,downstream
3	LOC_Os01g36860	DEAD-box ATP-dependent RNA helicase 40, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase 40, putative, expressed	chr1	20521402	20527198	+	CDS
3	LOC_Os06g40120	SPX domain containing protein, putative, expressed	gene	SPX domain containing protein, putative, expressed	chr6	23874411	23878968	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g47300	CAMK_CAMK_like.26 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.26 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr4	27894371	27897186	-	CDS,three_prime_UTR
3	LOC_Os12g34320	S-locus-like receptor protein kinase, putative, expressed	gene	S-locus-like receptor protein kinase, putative, expressed	chr12	20767898	20772086	+	CDS,downstream
3	LOC_Os04g30800	ER lumen protein retaining receptor, putative, expressed	gene	ER lumen protein retaining receptor, putative, expressed	chr4	18242359	18245654	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g47920	ZOS2-16 - C2H2 zinc finger protein	gene	ZOS2-16 - C2H2 zinc finger protein	chr2	29312762	29314803	+	CDS,downstream
3	LOC_Os01g54240	nucleoporin, putative, expressed	gene	nucleoporin, putative, expressed	chr1	31202399	31210231	+	CDS,three_prime_UTR
3	LOC_Os06g46450	polyprenyl synthetase, putative, expressed	gene	polyprenyl synthetase, putative, expressed	chr6	28189959	28195207	-	CDS
3	LOC_Os10g02980	formin, putative, expressed	gene	formin, putative, expressed	chr10	1233044	1240749	+	CDS,three_prime_UTR
3	LOC_Os02g58090	PSP domain containing protein, expressed	gene	PSP domain containing protein, expressed	chr2	35547983	35553043	+	CDS,promoter
3	LOC_Os03g21370	expressed protein	gene	expressed protein	chr3	12218542	12221955	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g22860	receptor kinase, putative, expressed	gene	receptor kinase, putative, expressed	chr10	11808948	11812227	+	CDS,downstream
3	LOC_Os08g35480	cupin superfamily protein, putative, expressed	gene	cupin superfamily protein, putative, expressed	chr8	22355759	22358356	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g04200	metallo-beta-lactamase family protein, putative, expressed	gene	metallo-beta-lactamase family protein, putative, expressed	chr1	1848834	1855303	+	CDS,three_prime_UTR,promoter
3	LOC_Os07g30300	small G protein family protein, putative, expressed	gene	small G protein family protein, putative, expressed	chr7	17906348	17911305	+	CDS,three_prime_UTR
3	LOC_Os08g14195	expressed protein	gene	expressed protein	chr8	8478365	8480828	+	three_prime_UTR,downstream
3	LOC_Os07g38664	expressed protein	gene	expressed protein	chr7	23216102	23219958	+	five_prime_UTR,CDS
3	LOC_Os08g23100	cyclase family protein, putative, expressed	gene	cyclase family protein, putative, expressed	chr8	13909929	13917072	-	CDS,three_prime_UTR
3	LOC_Os01g13425	expressed protein	gene	expressed protein	chr1	7472173	7475391	-	CDS,promoter,downstream
3	LOC_Os02g15920	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	9011714	9016578	+	CDS,downstream
3	LOC_Os04g51710	expressed protein	gene	expressed protein	chr4	30456971	30460721	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g02890	phosphatidylserine synthase, putative	gene	phosphatidylserine synthase, putative	chr1	1045604	1052166	+	CDS,three_prime_UTR
3	LOC_Os06g33530	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr6	19525783	19528695	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g05830	expressed protein	gene	expressed protein	chr1	2790224	2794865	+	CDS,three_prime_UTR,promoter
3	LOC_Os05g33820	lipase, putative, expressed	gene	lipase, putative, expressed	chr5	19872089	19875720	-	CDS
3	LOC_Os01g37960	hydrolase, putative, expressed	gene	hydrolase, putative, expressed	chr1	21264599	21269794	-	CDS,three_prime_UTR
3	LOC_Os03g61990	glycine-rich RNA-binding protein 7, putative, expressed	gene	glycine-rich RNA-binding protein 7, putative, expressed	chr3	35126977	35130215	-	three_prime_UTR
3	LOC_Os01g19410	expressed protein	gene	expressed protein	chr1	10979715	10982319	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g32430	NLI interacting factor-like phosphatase, putative, expressed	gene	NLI interacting factor-like phosphatase, putative, expressed	chr5	18865690	18870793	+	CDS,three_prime_UTR
3	LOC_Os04g14450	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr4	8080452	8085986	-	three_prime_UTR,promoter
3	LOC_Os04g09580	expressed protein	gene	expressed protein	chr4	5130669	5137585	-	CDS,three_prime_UTR
3	LOC_Os10g03750	OsFBX349 - F-box domain containing protein, expressed	gene	OsFBX349 - F-box domain containing protein, expressed	chr10	1693897	1696831	-	CDS,three_prime_UTR
3	LOC_Os03g12150	serine/threonine-protein kinase receptor precursor, putative, expressed	gene	serine/threonine-protein kinase receptor precursor, putative, expressed	chr3	6376128	6379731	+	three_prime_UTR,downstream
3	LOC_Os07g23550	expressed protein	gene	expressed protein	chr7	13312560	13315601	+	CDS,three_prime_UTR
3	LOC_Os05g51540	expressed protein	gene	expressed protein	chr5	29489883	29491497	-	three_prime_UTR,promoter,downstream
3	LOC_Os07g12170	ADP-ribosylation factor, putative, expressed	gene	ADP-ribosylation factor, putative, expressed	chr7	6807792	6811108	+	CDS,downstream
3	LOC_Os03g58040	glutamate dehydrogenase protein, putative, expressed	gene	glutamate dehydrogenase protein, putative, expressed	chr3	33030911	33036205	-	CDS,downstream
3	LOC_Os02g38480	expressed protein	gene	expressed protein	chr2	23259034	23266081	+	CDS
3	LOC_Os02g03110	CDP-alcohol phosphatidyltransferase, putative, expressed	gene	CDP-alcohol phosphatidyltransferase, putative, expressed	chr2	1231020	1234484	-	CDS,three_prime_UTR
3	LOC_Os05g38980	respiratory burst oxidase, putative, expressed	gene	respiratory burst oxidase, putative, expressed	chr5	22797594	22802628	+	CDS
3	LOC_Os07g06960	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr7	3425281	3427468	-	CDS,promoter,downstream
3	LOC_Os12g41956	galactosyltransferase family protein, putative, expressed	gene	galactosyltransferase family protein, putative, expressed	chr12	25983062	25987159	+	CDS,three_prime_UTR
3	LOC_Os05g04630	retrotransposon protein, putative, SINE subclass, expressed	gene	retrotransposon protein, putative, SINE subclass, expressed	chr5	2174847	2179093	+	CDS,three_prime_UTR,promoter
3	LOC_Os05g07260	phosphatidylinositolglycan-related, putative, expressed	gene	phosphatidylinositolglycan-related, putative, expressed	chr5	3839659	3843146	+	CDS,three_prime_UTR
3	LOC_Os03g11100	vesicle transport protein GOT1B, putative, expressed	gene	vesicle transport protein GOT1B, putative, expressed	chr3	5706359	5709082	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g19590	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr12	11417316	11426516	+	CDS,three_prime_UTR
3	LOC_Os05g13300	helicase, putative, expressed	gene	helicase, putative, expressed	chr5	7367109	7374425	-	CDS,three_prime_UTR
3	LOC_Os12g32650	expressed protein	gene	expressed protein	chr12	19672480	19679518	+	CDS,three_prime_UTR
3	LOC_Os08g41390	peptidyl-prolyl isomerase, putative, expressed	gene	peptidyl-prolyl isomerase, putative, expressed	chr8	26135753	26141694	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os10g31900	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr10	16679518	16684010	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g17920	RNA pseudouridine synthase, putative, expressed	gene	RNA pseudouridine synthase, putative, expressed	chr3	9980175	9985613	+	five_prime_UTR,three_prime_UTR,promoter
3	LOC_Os03g42799	expressed protein	gene	expressed protein	chr3	23839883	23842782	+	three_prime_UTR,downstream
3	LOC_Os12g29660	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr12	17678734	17688870	-	CDS,downstream
3	LOC_Os07g06670	OsFBL35 - F-box domain and LRR containing protein	gene	OsFBL35 - F-box domain and LRR containing protein	chr7	3250101	3254282	+	CDS,downstream
3	LOC_Os01g55650	phospholipase, patatin family, putative, expressed	gene	phospholipase, patatin family, putative, expressed	chr1	32056339	32061785	-	CDS
3	LOC_Os01g58290	OsSub9 - Putative Subtilisin homologue, expressed	gene	OsSub9 - Putative Subtilisin homologue, expressed	chr1	33690729	33695702	+	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os11g46240	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr11	27526751	27533537	+	CDS
3	LOC_Os01g36390	MCM4 - Putative minichromosome maintenance MCM complex subunit 4, expressed	gene	MCM4 - Putative minichromosome maintenance MCM complex subunit 4, expressed	chr1	20190980	20195959	+	CDS
3	LOC_Os03g52780	expressed protein	gene	expressed protein	chr3	30251880	30255277	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g56530	ankyrin repeat domain containing protein, expressed	gene	ankyrin repeat domain containing protein, expressed	chr2	34613941	34617796	-	CDS,three_prime_UTR
3	LOC_Os09g38440	ATXR, putative, expressed	gene	ATXR, putative, expressed	chr9	22129956	22134764	+	CDS
3	LOC_Os09g31270	polygalacturonase, putative, expressed	gene	polygalacturonase, putative, expressed	chr9	18800144	18802450	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g33810	OsSPL9 - SBP-box gene family member, expressed	gene	OsSPL9 - SBP-box gene family member, expressed	chr5	19860643	19869938	+	CDS,three_prime_UTR
3	LOC_Os02g50270	ankyrin repeat-containing protein, putative, expressed	gene	ankyrin repeat-containing protein, putative, expressed	chr2	30689455	30692532	+	CDS,three_prime_UTR
3	LOC_Os02g35039	NAD dependent epimerase/dehydratase family protein, putative, expressed	gene	NAD dependent epimerase/dehydratase family protein, putative, expressed	chr2	21021861	21032995	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g24590	transposon protein, putative, Pong sub-class, expressed	gene	transposon protein, putative, Pong sub-class, expressed	chr11	13575223	13578820	+	CDS,three_prime_UTR
3	LOC_Os01g29230	expressed protein	gene	expressed protein	chr1	16376690	16388690	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g48240	dynamin family protein, putative, expressed	gene	dynamin family protein, putative, expressed	chr5	27585335	27591042	-	three_prime_UTR,CDS,promoter
3	LOC_Os02g32430	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr2	19171221	19174143	-	three_prime_UTR,promoter
3	LOC_Os09g24670	CAAX amino terminal protease family protein, putative, expressed	gene	CAAX amino terminal protease family protein, putative, expressed	chr9	14679806	14683521	+	three_prime_UTR,CDS,downstream
3	LOC_Os04g52730	NAD dependent epimerase/dehydratase family domain containing protein, expressed	gene	NAD dependent epimerase/dehydratase family domain containing protein, expressed	chr4	31218263	31222179	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g54030	NADP-dependent malic enzyme, putative, expressed	gene	NADP-dependent malic enzyme, putative, expressed	chr1	31075527	31080333	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g30620	dnaJ domain containing protein, expressed	gene	dnaJ domain containing protein, expressed	chr2	18221542	18225610	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g41650	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr1	23580099	23583716	+	CDS,three_prime_UTR,promoter
3	LOC_Os11g41170	disease resistance protein RPM1, putative, expressed	gene	disease resistance protein RPM1, putative, expressed	chr11	24204807	24208178	+	five_prime_UTR,CDS,promoter
3	LOC_Os05g49050	CobW/P47K family protein, putative, expressed	gene	CobW/P47K family protein, putative, expressed	chr5	28062566	28065757	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g40580	methyltransferase domain containing protein, expressed	gene	methyltransferase domain containing protein, expressed	chr8	25684906	25687913	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g30720	kinesin motor domain containing protein, putative, expressed	gene	kinesin motor domain containing protein, putative, expressed	chr4	18189234	18194245	-	CDS,three_prime_UTR
3	LOC_Os06g42430	expressed protein	gene	expressed protein	chr6	25497388	25500758	+	CDS,three_prime_UTR
3	LOC_Os01g62750	expressed protein	gene	expressed protein	chr1	36324640	36335518	-	CDS
3	LOC_Os04g38630	helicase conserved C-terminal domain containing protein, expressed	gene	helicase conserved C-terminal domain containing protein, expressed	chr4	22762697	22766767	-	CDS,three_prime_UTR
3	LOC_Os02g55540	F-box/LRR-repeat protein 14, putative, expressed	gene	F-box/LRR-repeat protein 14, putative, expressed	chr2	34001698	34004220	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g57310	rp1, putative, expressed	gene	rp1, putative, expressed	chr1	33115073	33123327	+	CDS
3	LOC_Os02g55420	aminotransferase, classes I and II, domain containing protein, expressed	gene	aminotransferase, classes I and II, domain containing protein, expressed	chr2	33936155	33940526	+	CDS
3	LOC_Os12g07260	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr12	3565985	3571002	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g03450	vesicle transport v-SNARE protein, putative, expressed	gene	vesicle transport v-SNARE protein, putative, expressed	chr2	1402571	1404566	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g04860	expressed protein	gene	expressed protein	chr2	2242926	2246169	-	CDS
3	LOC_Os01g59880	inositol-1, 4, 5-trisphosphate 5-phosphatase, putative, expressed	gene	inositol-1, 4, 5-trisphosphate 5-phosphatase, putative, expressed	chr1	34628316	34634162	-	three_prime_UTR
3	LOC_Os02g05030	sucrose-phosphatase, putative, expressed	gene	sucrose-phosphatase, putative, expressed	chr2	2388397	2394344	+	CDS
3	LOC_Os05g37884	50S ribosomal protein L33, putative, expressed	gene	50S ribosomal protein L33, putative, expressed	chr5	22135755	22136983	+	three_prime_UTR,promoter,downstream
3	LOC_Os07g40750	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr7	24418889	24421338	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g01280	glycosyltransferase family 43 protein, putative, expressed	gene	glycosyltransferase family 43 protein, putative, expressed	chr4	214929	218439	+	three_prime_UTR,downstream
3	LOC_Os08g01930	KH domain-containing protein, putative, expressed	gene	KH domain-containing protein, putative, expressed	chr8	571856	577417	+	CDS
3	LOC_Os05g49150	eukaryotic translation initiation factor 3 subunit D, putative, expressed	gene	eukaryotic translation initiation factor 3 subunit D, putative, expressed	chr5	28139439	28141582	-	three_prime_UTR,promoter,downstream
3	LOC_Os01g73880	eukaryotic translation initiation factor, putative, expressed	gene	eukaryotic translation initiation factor, putative, expressed	chr1	42810884	42814246	+	CDS,three_prime_UTR
3	LOC_Os01g39680	expressed protein	gene	expressed protein	chr1	22378014	22382004	+	three_prime_UTR,CDS,promoter
3	LOC_Os10g35930	OsPLIM2c - LIM domain protein, putative actin-binding protein and transcription factor, expressed	gene	OsPLIM2c - LIM domain protein, putative actin-binding protein and transcription factor, expressed	chr10	19127301	19129290	-	five_prime_UTR,CDS,downstream
3	LOC_Os04g51280	DAG protein, chloroplast precursor, putative, expressed	gene	DAG protein, chloroplast precursor, putative, expressed	chr4	30192139	30194407	+	CDS,three_prime_UTR,promoter
3	LOC_Os04g34670	tRNA-splicing endonuclease positive effector-related, putative, expressed	gene	tRNA-splicing endonuclease positive effector-related, putative, expressed	chr4	20795215	20801180	+	CDS,three_prime_UTR
3	LOC_Os12g32940	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr12	19867836	19870108	-	CDS,three_prime_UTR
3	LOC_Os01g67850	zinc finger, RING-type, putative, expressed	gene	zinc finger, RING-type, putative, expressed	chr1	39428021	39431453	+	CDS,three_prime_UTR
3	LOC_Os09g13870	lipid phosphatase protein, putative, expressed	gene	lipid phosphatase protein, putative, expressed	chr9	8150807	8157611	-	CDS,three_prime_UTR
3	LOC_Os03g56241	40S ribosomal protein S29, putative, expressed	gene	40S ribosomal protein S29, putative, expressed	chr3	32034414	32036285	-	three_prime_UTR,promoter,downstream
3	LOC_Os04g57890	oligosaccharyl transferase, putative, expressed	gene	oligosaccharyl transferase, putative, expressed	chr4	34306275	34311432	-	CDS,three_prime_UTR,downstream
3	LOC_Os04g52479	peptidase, trypsin-like serine and cysteine proteases, putative, expressed	gene	peptidase, trypsin-like serine and cysteine proteases, putative, expressed	chr4	31018415	31029631	+	CDS
3	LOC_Os01g35160	TKL_IRAK_DUF26-lh.4 - DUF26 kinases have homology to DUF26 containing loci, expressed	gene	TKL_IRAK_DUF26-lh.4 - DUF26 kinases have homology to DUF26 containing loci, expressed	chr1	19453095	19457269	-	CDS,three_prime_UTR
3	LOC_Os05g01630	OsFBX156 - F-box domain containing protein, expressed	gene	OsFBX156 - F-box domain containing protein, expressed	chr5	372754	375683	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g46080	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr1	26197016	26200666	+	CDS
3	LOC_Os01g55880	hemimethylated DNA binding domain containing protein	gene	hemimethylated DNA binding domain containing protein	chr1	32176846	32180748	-	CDS,promoter
3	LOC_Os03g24844	expressed protein	gene	expressed protein	chr3	14149180	14152372	+	three_prime_UTR,promoter,downstream
3	LOC_Os03g13560	hydroxyproline-rich glycoprotein family protein, putative, expressed	gene	hydroxyproline-rich glycoprotein family protein, putative, expressed	chr3	7328101	7334051	-	CDS,three_prime_UTR
3	LOC_Os01g32720	expressed protein	gene	expressed protein	chr1	17934843	17946034	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g45750	expressed protein	gene	expressed protein	chr4	26892239	26895467	-	three_prime_UTR,promoter
3	LOC_Os09g33690	Os9bglu32 - beta-glucosidase homologue, similar to G. max hydroxyisourate hydrolase, expressed	gene	Os9bglu32 - beta-glucosidase homologue, similar to G. max hydroxyisourate hydrolase, expressed	chr9	19900023	19904071	-	CDS,three_prime_UTR
3	LOC_Os04g56670	S4 domain containing protein, putative, expressed	gene	S4 domain containing protein, putative, expressed	chr4	33599250	33601358	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g37980	vesicle transport v-SNARE protein, putative, expressed	gene	vesicle transport v-SNARE protein, putative, expressed	chr1	21274573	21277770	+	CDS,three_prime_UTR
3	LOC_Os11g08080	SWIRM domain containing protein, expressed	gene	SWIRM domain containing protein, expressed	chr11	4216731	4225375	+	CDS
3	LOC_Os05g29974	lipase, putative, expressed	gene	lipase, putative, expressed	chr5	17276358	17283845	+	CDS
3	LOC_Os04g36054	auxin response factor 9, putative, expressed	gene	auxin response factor 9, putative, expressed	chr4	21834267	21840074	+	CDS,three_prime_UTR
3	LOC_Os12g04520	FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed	gene	FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed	chr12	1921206	1925697	-	CDS,three_prime_UTR
3	LOC_Os11g43600	peptide chain release factor protein, putative, expressed	gene	peptide chain release factor protein, putative, expressed	chr11	25834488	25838867	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g32810	expressed protein	gene	expressed protein	chr5	19154673	19156580	-	CDS,three_prime_UTR,downstream
3	LOC_Os09g14510	peroxin-3 family protein, putative, expressed	gene	peroxin-3 family protein, putative, expressed	chr9	8584969	8588948	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g56560	cyclase/dehydrase family protein, expressed	gene	cyclase/dehydrase family protein, expressed	chr1	32607637	32610001	+	CDS
3	LOC_Os03g54000	oligopeptide transporter, putative, expressed	gene	oligopeptide transporter, putative, expressed	chr3	30952485	30956661	-	three_prime_UTR,promoter
3	LOC_Os09g32526	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	chr9	19414912	19417619	-	CDS,three_prime_UTR,five_prime_UTR,promoter,downstream
3	LOC_Os11g03760	expressed protein	gene	expressed protein	chr11	1471832	1476591	-	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os04g31070	acyl-desaturase, chloroplast precursor, putative, expressed	gene	acyl-desaturase, chloroplast precursor, putative, expressed	chr4	18388222	18392462	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g24134	Sec1 family transport protein, putative, expressed	gene	Sec1 family transport protein, putative, expressed	chr2	13971739	13981560	-	CDS,three_prime_UTR
3	LOC_Os01g01170	expressed protein	gene	expressed protein	chr1	84337	87844	+	CDS,three_prime_UTR
3	LOC_Os03g53660	Myosin head domain containing protein, expressed	gene	Myosin head domain containing protein, expressed	chr3	30757473	30766834	+	CDS,promoter
3	LOC_Os08g10020	photosystem II 10 kDa polypeptide, chloroplast precursor, putative, expressed	gene	photosystem II 10 kDa polypeptide, chloroplast precursor, putative, expressed	chr8	5805461	5807461	-	three_prime_UTR,promoter,downstream
3	LOC_Os09g28110	hydroxyproline-rich glycoprotein family protein, putative, expressed	gene	hydroxyproline-rich glycoprotein family protein, putative, expressed	chr9	17061564	17066607	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g45500	copper-transporting ATPase, putative, expressed	gene	copper-transporting ATPase, putative, expressed	chr6	27516103	27522606	-	CDS
3	LOC_Os01g16090	RNA binding protein, putative, expressed	gene	RNA binding protein, putative, expressed	chr1	9062968	9065787	-	three_prime_UTR,promoter,downstream
3	LOC_Os06g03780	NUC153 domain containing protein, expressed	gene	NUC153 domain containing protein, expressed	chr6	1503212	1511123	+	CDS,three_prime_UTR
3	LOC_Os02g07800	transcription factor, putative, expressed	gene	transcription factor, putative, expressed	chr2	4083020	4086044	+	CDS
3	LOC_Os03g55890	ternary complex factor MIP1, putative, expressed	gene	ternary complex factor MIP1, putative, expressed	chr3	31818383	31822562	-	CDS
3	LOC_Os02g02460	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr2	866007	869292	-	three_prime_UTR,promoter
3	LOC_Os03g31750	pyruvate, phosphate dikinase, chloroplast precursor, putative, expressed	gene	pyruvate, phosphate dikinase, chloroplast precursor, putative, expressed	chr3	18151925	18158909	-	CDS,three_prime_UTR
3	LOC_Os09g36260	hypothetical protein	gene	hypothetical protein	chr9	20920528	20921690	-	CDS,downstream
3	LOC_Os11g34800	expressed protein	gene	expressed protein	chr11	19920173	19922880	-	three_prime_UTR,promoter
3	LOC_Os02g17304	resistance protein, putative, expressed	gene	resistance protein, putative, expressed	chr2	9922463	9928347	-	CDS,promoter,downstream
3	LOC_Os02g46740	RWD domain containing protein, expressed	gene	RWD domain containing protein, expressed	chr2	28539305	28542470	+	three_prime_UTR,downstream
3	LOC_Os03g17634	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr3	9796288	9821065	-	CDS,three_prime_UTR
3	LOC_Os02g01980	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr2	545700	548273	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g38790	expressed protein	gene	expressed protein	chr3	21540492	21543164	+	CDS,three_prime_UTR
3	LOC_Os05g01760	lysine ketoglutarate reductase trans-splicing related 1, putative, expressed	gene	lysine ketoglutarate reductase trans-splicing related 1, putative, expressed	chr5	453836	458282	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g15820	extra-large G-protein-related, putative, expressed	gene	extra-large G-protein-related, putative, expressed	chr2	8938126	8943649	-	CDS,three_prime_UTR
3	LOC_Os03g11140	pleckstrin homology domain-containing protein-related taxo, putative, expressed	gene	pleckstrin homology domain-containing protein-related taxo, putative, expressed	chr3	5734001	5745233	+	CDS,three_prime_UTR
3	LOC_Os11g40450	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr11	23654013	23666510	-	CDS,promoter
3	LOC_Os02g35100	DDT domain containing protein, putative, expressed	gene	DDT domain containing protein, putative, expressed	chr2	21058269	21063148	-	CDS,three_prime_UTR
3	LOC_Os06g27820	expressed protein	gene	expressed protein	chr6	15754162	15758168	-	CDS
3	LOC_Os05g19470	expressed protein	gene	expressed protein	chr5	11314263	11319925	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g18830	programmed cell death protein 2, putative, expressed	gene	programmed cell death protein 2, putative, expressed	chr3	10550657	10555088	-	CDS,three_prime_UTR
3	LOC_Os11g43860	sodium/calcium exchanger protein, putative, expressed	gene	sodium/calcium exchanger protein, putative, expressed	chr11	26016786	26020797	-	CDS,three_prime_UTR
3	LOC_Os09g13590	expressed protein	gene	expressed protein	chr9	7887126	7888225	-	CDS,downstream
3	LOC_Os01g33540	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr1	18458215	18462299	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g16914	expressed protein	gene	expressed protein	chr8	10359413	10363294	-	three_prime_UTR
3	LOC_Os03g31594	jmjC domain containing protein, expressed	gene	jmjC domain containing protein, expressed	chr3	18025522	18040655	+	CDS,three_prime_UTR
3	LOC_Os07g06450	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr7	3121612	3123605	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g26700	cation transport regulator-like protein 1, putative, expressed	gene	cation transport regulator-like protein 1, putative, expressed	chr2	15670353	15673819	-	CDS,three_prime_UTR,five_prime_UTR
3	LOC_Os12g03100	exostosin family domain containing protein, expressed	gene	exostosin family domain containing protein, expressed	chr12	1171671	1174788	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g27850	oxidoreductase, putative, expressed	gene	oxidoreductase, putative, expressed	chr4	16277538	16284558	+	CDS
3	LOC_Os11g39568	expressed protein	gene	expressed protein	chr11	23112708	23115462	+	CDS,three_prime_UTR
3	LOC_Os07g36600	universal stress protein domain containing protein, putative, expressed	gene	universal stress protein domain containing protein, putative, expressed	chr7	21893666	21897734	-	three_prime_UTR
3	LOC_Os02g27220	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr2	16003639	16008613	-	CDS,three_prime_UTR
3	LOC_Os04g55250	expressed protein	gene	expressed protein	chr4	32670511	32671999	+	three_prime_UTR,downstream
3	LOC_Os07g38760	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr7	23255431	23264301	-	CDS,three_prime_UTR
3	LOC_Os05g05830	bifunctional protein folD, putative, expressed	gene	bifunctional protein folD, putative, expressed	chr5	2925746	2928065	+	three_prime_UTR,CDS,downstream
3	LOC_Os04g43350	expressed protein	gene	expressed protein	chr4	25451928	25454285	+	three_prime_UTR,promoter
3	LOC_Os12g31820	phosphoserine phosphatase, chloroplast precursor, putative, expressed	gene	phosphoserine phosphatase, chloroplast precursor, putative, expressed	chr12	19118818	19122389	-	CDS,three_prime_UTR
3	LOC_Os01g47740	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr1	27302067	27311264	-	CDS
3	LOC_Os06g29690	dynein light chain type 1 domain containing protein, expressed	gene	dynein light chain type 1 domain containing protein, expressed	chr6	17034083	17035918	+	CDS,three_prime_UTR
3	LOC_Os04g56590	ATP/GTP binding protein, putative, expressed	gene	ATP/GTP binding protein, putative, expressed	chr4	33555252	33561853	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g53384	expressed protein	gene	expressed protein	chr2	32672888	32675300	+	three_prime_UTR
3	LOC_Os09g35810	NC domain-containing protein, putative, expressed	gene	NC domain-containing protein, putative, expressed	chr9	20605346	20608889	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os05g41880	mutS domain V family protein, expressed	gene	mutS domain V family protein, expressed	chr5	24460316	24469711	+	CDS,downstream
3	LOC_Os04g44320	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr4	26062602	26067144	+	CDS
3	LOC_Os03g27930	RNA cap guanine-N2 methyltransferase domain containing protein, expressed	gene	RNA cap guanine-N2 methyltransferase domain containing protein, expressed	chr3	16037640	16044185	+	CDS,three_prime_UTR
3	LOC_Os02g42730	expressed protein	gene	expressed protein	chr2	25688023	25690763	+	three_prime_UTR,downstream
3	LOC_Os02g29320	expressed protein	gene	expressed protein	chr2	17410513	17413493	+	CDS,three_prime_UTR
3	LOC_Os05g08900	expressed protein	gene	expressed protein	chr5	4925190	4928153	+	CDS,promoter,downstream
3	LOC_Os01g42500	zinc finger, C3HC4 type family protein, expressed	gene	zinc finger, C3HC4 type family protein, expressed	chr1	24162307	24165167	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g08560	DnaK family protein, putative, expressed	gene	DnaK family protein, putative, expressed	chr1	4252838	4258626	+	CDS
3	LOC_Os04g52790	hypothetical protein	gene	hypothetical protein	chr4	31247332	31247850	-	CDS,promoter
3	LOC_Os03g31550	aldehyde oxidase, putative, expressed	gene	aldehyde oxidase, putative, expressed	chr3	17984345	17997280	+	CDS,three_prime_UTR
3	LOC_Os01g66680	S-domain receptor-like protein kinase, putative, expressed	gene	S-domain receptor-like protein kinase, putative, expressed	chr1	38728771	38733981	+	CDS
3	LOC_Os04g53770	SDA1, putative, expressed	gene	SDA1, putative, expressed	chr4	31858426	31863600	+	CDS
3	LOC_Os03g28960	DNA-directed RNA polymerase subunit, putative, expressed	gene	DNA-directed RNA polymerase subunit, putative, expressed	chr3	16419681	16438241	+	CDS,three_prime_UTR
3	LOC_Os01g01130	snurportin-1, putative, expressed	gene	snurportin-1, putative, expressed	chr1	62244	65302	-	CDS,three_prime_UTR
3	LOC_Os05g41010	oxidoreductase, putative, expressed	gene	oxidoreductase, putative, expressed	chr5	23978390	23981326	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g13100	ariadne-1, putative, expressed	gene	ariadne-1, putative, expressed	chr3	7073682	7078258	+	CDS
3	LOC_Os05g06990	TKL_IRAK_CrRLK1L-1.10 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed	gene	TKL_IRAK_CrRLK1L-1.10 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed	chr5	3670980	3673754	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g23380	metallo-beta-lactamase, putative, expressed	gene	metallo-beta-lactamase, putative, expressed	chr9	13890776	13896440	+	CDS
3	LOC_Os02g19850	hAT dimerisation domain-containing protein, putative, expressed	gene	hAT dimerisation domain-containing protein, putative, expressed	chr2	11663432	11668032	-	CDS,three_prime_UTR
3	LOC_Os12g03260	MATE efflux family protein, putative, expressed	gene	MATE efflux family protein, putative, expressed	chr12	1250151	1255056	-	CDS
3	LOC_Os08g14610	DRD1, putative	gene	DRD1, putative	chr8	8783444	8792980	-	CDS
3	LOC_Os08g13644	unknown	gene	unknown	chr8	8116046	8119259	-	five_prime_UTR,three_prime_UTR,promoter
3	LOC_Os08g23470	B3 DNA binding domain containing protein, expressed	gene	B3 DNA binding domain containing protein, expressed	chr8	14207177	14210604	-	CDS
3	LOC_Os08g33670	no apical meristem protein, putative, expressed	gene	no apical meristem protein, putative, expressed	chr8	21022831	21026246	-	three_prime_UTR,promoter
3	LOC_Os06g45320	DEFL27 - Defensin and Defensin-like DEFL family	gene	DEFL27 - Defensin and Defensin-like DEFL family	chr6	27395212	27395879	-	CDS,downstream
3	LOC_Os01g36070	nodulin MtN3 family protein, putative, expressed	gene	nodulin MtN3 family protein, putative, expressed	chr1	19958622	19960947	+	CDS,downstream
3	LOC_Os10g29530	expressed protein	gene	expressed protein	chr10	15266979	15270031	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os10g42840	NADH dehydrogenase 1 alpha subcomplex subunit 12, putative, expressed	gene	NADH dehydrogenase 1 alpha subcomplex subunit 12, putative, expressed	chr10	23028838	23031774	-	CDS,three_prime_UTR
3	LOC_Os02g11830	coatomer subunit beta, putative, expressed	gene	coatomer subunit beta, putative, expressed	chr2	6119039	6129217	-	CDS,promoter
3	LOC_Os04g36730	PHD finger protein, putative, expressed	gene	PHD finger protein, putative, expressed	chr4	22003895	22006712	+	CDS,three_prime_UTR
3	LOC_Os01g09500	expressed protein	gene	expressed protein	chr1	4848901	4851193	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g58830	ribosome biogenesis regulatory protein, putative, expressed	gene	ribosome biogenesis regulatory protein, putative, expressed	chr4	34806845	34809687	-	three_prime_UTR,promoter
3	LOC_Os12g01910	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr12	530180	534127	+	CDS,downstream
3	LOC_Os05g01190	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr5	143838	147616	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g42150	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr10	22602833	22605062	-	CDS
3	LOC_Os03g03830	EF hand family protein, putative, expressed	gene	EF hand family protein, putative, expressed	chr3	1719030	1726903	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g05870	receptor kinase, putative, expressed	gene	receptor kinase, putative, expressed	chr1	2809313	2814017	+	CDS,promoter
3	LOC_Os07g07194	MAC/Perforin domain containing protein, putative, expressed	gene	MAC/Perforin domain containing protein, putative, expressed	chr7	3560089	3568184	-	CDS
3	LOC_Os11g35050	expressed protein	gene	expressed protein	chr11	20066958	20072111	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g10430	protein of unknown function DUF1296 domain containing protein, expressed	gene	protein of unknown function DUF1296 domain containing protein, expressed	chr6	5358509	5366121	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g22320	utp14 protein, putative, expressed	gene	utp14 protein, putative, expressed	chr3	12787096	12792139	+	CDS,three_prime_UTR
3	LOC_Os01g36229	expressed protein	gene	expressed protein	chr1	20040572	20043699	+	three_prime_UTR,downstream
3	LOC_Os04g11880	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr4	6507018	6514458	+	CDS,downstream
3	LOC_Os05g22920	digestive organ expansion factor, putative, expressed	gene	digestive organ expansion factor, putative, expressed	chr5	12970482	12989607	+	CDS,three_prime_UTR
3	LOC_Os06g07474	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr6	3587218	3594866	-	CDS
3	LOC_Os05g26926	chaperone protein dnaJ, putative, expressed	gene	chaperone protein dnaJ, putative, expressed	chr5	15577901	15581038	-	CDS,three_prime_UTR
3	LOC_Os04g57640	RCD1, putative, expressed	gene	RCD1, putative, expressed	chr4	34128980	34135044	-	CDS,three_prime_UTR
3	LOC_Os03g01150	palmitoyl-protein thioesterase 1 precursor, putative, expressed	gene	palmitoyl-protein thioesterase 1 precursor, putative, expressed	chr3	105514	109545	+	CDS
3	LOC_Os10g33855	expressed protein	gene	expressed protein	chr10	17896456	17900113	+	three_prime_UTR,CDS,downstream
3	LOC_Os01g51200	CK1_CaseinKinase_1.3 - CK1 includes the casein kinase 1 kinases, expressed	gene	CK1_CaseinKinase_1.3 - CK1 includes the casein kinase 1 kinases, expressed	chr1	29430556	29435421	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g62160	trp repressor/replication initiator, putative, expressed	gene	trp repressor/replication initiator, putative, expressed	chr1	35982776	35986549	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g14440	DRD1, putative, expressed	gene	DRD1, putative, expressed	chr6	8096282	8103473	+	CDS
3	LOC_Os01g05100	expressed protein	gene	expressed protein	chr1	2387208	2389483	-	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os09g07480	membrane associated DUF588 domain containing protein, putative, expressed	gene	membrane associated DUF588 domain containing protein, putative, expressed	chr9	3744683	3748470	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g47460	expressed protein	gene	expressed protein	chr7	28370583	28372368	+	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os01g62780	hypothetical protein	gene	hypothetical protein	chr1	36353661	36356984	+	CDS,downstream
3	LOC_Os01g01150	RNA recognition motif, putative, expressed	gene	RNA recognition motif, putative, expressed	chr1	71775	78938	+	three_prime_UTR
3	LOC_Os05g06700	expressed protein	gene	expressed protein	chr5	3489143	3492272	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g14270	expressed protein	gene	expressed protein	chr5	8014249	8017410	+	CDS,three_prime_UTR
3	LOC_Os03g26860	ribosomal protein, putative, expressed	gene	ribosomal protein, putative, expressed	chr3	15320509	15322640	-	three_prime_UTR,promoter
3	LOC_Os05g41750	RecF/RecN/SMC N terminal domain containing protein, expressed	gene	RecF/RecN/SMC N terminal domain containing protein, expressed	chr5	24360493	24363911	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g02400	OsFBO18 - F-box and other domain containing protein	gene	OsFBO18 - F-box and other domain containing protein	chr6	824522	828064	+	CDS,promoter
3	LOC_Os11g29190	40S ribosomal protein S5, putative, expressed	gene	40S ribosomal protein S5, putative, expressed	chr11	16452540	16454636	-	three_prime_UTR,promoter
3	LOC_Os02g01940	transcription factor jumonji, putative	gene	transcription factor jumonji, putative	chr2	509377	517148	-	CDS
3	LOC_Os10g25140	aminotransferase, classes I and II, domain containing protein, expressed	gene	aminotransferase, classes I and II, domain containing protein, expressed	chr10	12906212	12911293	+	CDS
3	LOC_Os09g38720	mTERF domain containing protein, expressed	gene	mTERF domain containing protein, expressed	chr9	22255518	22259443	+	CDS,downstream
3	LOC_Os04g58350	TFIIH basal transcription factor complex p52 subunit, putative, expressed	gene	TFIIH basal transcription factor complex p52 subunit, putative, expressed	chr4	34540331	34545281	+	CDS
3	LOC_Os01g71106	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr1	41154770	41159683	-	CDS,three_prime_UTR
3	LOC_Os08g42750	CAMK_CAMK_like.37 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.37 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr8	27051487	27056661	-	three_prime_UTR,promoter
3	LOC_Os03g47949	HECT-domain domain containing protein, expressed	gene	HECT-domain domain containing protein, expressed	chr3	27250721	27256542	-	CDS
3	LOC_Os05g07090	acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed	gene	acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed	chr5	3730289	3735218	-	five_prime_UTR,CDS,promoter
3	LOC_Os09g35880	B-box zinc finger family protein, putative, expressed	gene	B-box zinc finger family protein, putative, expressed	chr9	20645916	20649512	-	CDS,three_prime_UTR
3	LOC_Os03g44200	beclin-1, putative, expressed	gene	beclin-1, putative, expressed	chr3	24833619	24839417	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g44110	hydrolase, putative, expressed	gene	hydrolase, putative, expressed	chr4	25929676	25933001	+	CDS,promoter
3	LOC_Os09g21340	nucleobase-ascorbate transporter, putative, expressed	gene	nucleobase-ascorbate transporter, putative, expressed	chr9	12883070	12887676	+	CDS
3	LOC_Os04g36910	expressed protein	gene	expressed protein	chr4	22081967	22087217	-	CDS,three_prime_UTR
3	LOC_Os09g29780	expressed protein	gene	expressed protein	chr9	18095793	18099424	-	three_prime_UTR,promoter,downstream
3	LOC_Os10g11200	aminotransferase, classes I and II, domain containing protein, expressed	gene	aminotransferase, classes I and II, domain containing protein, expressed	chr10	6224621	6229850	-	CDS
3	LOC_Os07g43720	DCN1, putative, expressed	gene	DCN1, putative, expressed	chr7	26162641	26167101	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g08290	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr6	4014963	4018328	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g03550	expressed protein	gene	expressed protein	chr8	1648039	1651650	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g20340	dual specificity protein phosphatase, putative, expressed	gene	dual specificity protein phosphatase, putative, expressed	chr6	11683181	11686916	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g10220	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr2	5351467	5355147	+	CDS,three_prime_UTR
3	LOC_Os04g43922	exosome complex exonuclease rrp4, putative, expressed	gene	exosome complex exonuclease rrp4, putative, expressed	chr4	25851648	25856318	-	CDS,three_prime_UTR
3	LOC_Os05g50120	CGMC_MAPKCMGC_2.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	gene	CGMC_MAPKCMGC_2.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	chr5	28658367	28663877	+	CDS
3	LOC_Os08g33082	DNA-repair protein complementing XP-C cells, putative, expressed	gene	DNA-repair protein complementing XP-C cells, putative, expressed	chr8	20556308	20563505	+	CDS,three_prime_UTR,promoter
3	LOC_Os09g26420	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr9	15958323	15961974	+	CDS,three_prime_UTR
3	LOC_Os04g35240	CAMK_CAMK_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr4	21242549	21248009	+	CDS
3	LOC_Os08g37500	expressed protein	gene	expressed protein	chr8	23753435	23755551	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g48770	60S ribosomal protein L37a, putative, expressed	gene	60S ribosomal protein L37a, putative, expressed	chr1	27964489	27967073	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g70820	lumenal PsbP, putative, expressed	gene	lumenal PsbP, putative, expressed	chr1	40993260	40996089	+	CDS
3	LOC_Os07g48350	structural constituent of ribosome, putative, expressed	gene	structural constituent of ribosome, putative, expressed	chr7	28892105	28899970	+	CDS,three_prime_UTR
3	LOC_Os03g63090	actin-related protein 2/3 complex subunit 4, putative, expressed	gene	actin-related protein 2/3 complex subunit 4, putative, expressed	chr3	35662524	35665664	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g09630	homeobox domain containing protein, expressed	gene	homeobox domain containing protein, expressed	chr5	5437039	5445190	+	CDS,three_prime_UTR
3	LOC_Os01g22870	expressed protein	gene	expressed protein	chr1	12847886	12852384	+	CDS,three_prime_UTR
3	LOC_Os01g52540	B3 DNA binding domain containing protein, expressed	gene	B3 DNA binding domain containing protein, expressed	chr1	30184089	30188867	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g56790	actin-depolymerizing factor, putative, expressed	gene	actin-depolymerizing factor, putative, expressed	chr3	32353444	32356711	-	CDS,three_prime_UTR
3	LOC_Os08g05340	expressed protein	gene	expressed protein	chr8	2807276	2812029	+	CDS,downstream
3	LOC_Os07g43980	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr7	26291140	26295161	-	CDS,three_prime_UTR
3	LOC_Os10g23100	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr10	11976861	11981767	-	CDS,three_prime_UTR
3	LOC_Os05g06350	importin subunit alpha, putative, expressed	gene	importin subunit alpha, putative, expressed	chr5	3251056	3256018	-	three_prime_UTR
3	LOC_Os03g25720	GA20734-PA, putative, expressed	gene	GA20734-PA, putative, expressed	chr3	14719658	14723941	-	three_prime_UTR
3	LOC_Os02g05692	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr2	2791240	2795469	+	CDS
3	LOC_Os02g15610	40S ribosomal protein S15a, putative, expressed	gene	40S ribosomal protein S15a, putative, expressed	chr2	8766777	8769280	-	CDS,promoter
3	LOC_Os06g45050	clathrin assembly protein, putative, expressed	gene	clathrin assembly protein, putative, expressed	chr6	27256460	27260085	+	CDS,downstream
3	LOC_Os03g57950	type I inositol-1,4,5-trisphosphate 5-phosphatase, putative, expressed	gene	type I inositol-1,4,5-trisphosphate 5-phosphatase, putative, expressed	chr3	33003825	33007266	+	CDS,downstream
3	LOC_Os08g41550	ubiquitin carboxyl-terminal hydrolase, putative, expressed	gene	ubiquitin carboxyl-terminal hydrolase, putative, expressed	chr8	26242664	26248232	-	CDS,three_prime_UTR
3	LOC_Os11g43895	expressed protein	gene	expressed protein	chr11	26033906	26036190	-	three_prime_UTR,promoter
3	LOC_Os02g56320	glycogen synthase 1, putative, expressed	gene	glycogen synthase 1, putative, expressed	chr2	34470061	34477935	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g04630	muconate cycloisomerase, putative, expressed	gene	muconate cycloisomerase, putative, expressed	chr1	2073753	2076903	-	CDS
3	LOC_Os07g12140	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr7	6789691	6795636	+	CDS
3	LOC_Os10g13810	glycosyltransferase family 43 protein, putative, expressed	gene	glycosyltransferase family 43 protein, putative, expressed	chr10	7514938	7519076	-	three_prime_UTR,promoter
3	LOC_Os08g37444	signal recognition particle receptor, putative, expressed	gene	signal recognition particle receptor, putative, expressed	chr8	23714871	23719645	-	CDS,three_prime_UTR
3	LOC_Os02g35750	pentatricopeptide repeat domain containing protein, putative, expressed	gene	pentatricopeptide repeat domain containing protein, putative, expressed	chr2	21465862	21469764	+	three_prime_UTR
3	LOC_Os01g53660	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr1	30827727	30831214	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g58110	expressed protein	gene	expressed protein	chr2	35558808	35561676	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g53350	expressed protein	gene	expressed protein	chr4	31583801	31588066	-	CDS,three_prime_UTR
3	LOC_Os03g52430	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr3	30078480	30083146	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g34630	retrotransposon protein, putative, Ty1-copia subclass, expressed	gene	retrotransposon protein, putative, Ty1-copia subclass, expressed	chr1	19094472	19099112	-	three_prime_UTR,promoter
3	LOC_Os07g31280	casein kinase II subunit beta-4, putative, expressed	gene	casein kinase II subunit beta-4, putative, expressed	chr7	18518365	18522626	+	CDS,three_prime_UTR
3	LOC_Os12g07940	expressed protein	gene	expressed protein	chr12	4027015	4030556	+	three_prime_UTR,downstream
3	LOC_Os05g30980	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr5	17934689	17940498	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g48760	UTP--glucose-1-phosphate uridylyltransferase, putative, expressed	gene	UTP--glucose-1-phosphate uridylyltransferase, putative, expressed	chr6	29507826	29514311	-	CDS,three_prime_UTR
3	LOC_Os03g37970	ribosomal protein L13, putative, expressed	gene	ribosomal protein L13, putative, expressed	chr3	21084739	21087075	-	three_prime_UTR,promoter
3	LOC_Os02g58300	expressed protein	gene	expressed protein	chr2	35668928	35670562	-	three_prime_UTR
3	LOC_Os03g41530	single-stranded DNA-binding protein, putative, expressed	gene	single-stranded DNA-binding protein, putative, expressed	chr3	23091627	23094874	-	CDS,three_prime_UTR,five_prime_UTR,promoter
3	LOC_Os07g06060	expressed protein	gene	expressed protein	chr7	2939293	2941826	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g03820	C2 domain containing protein, putative, expressed	gene	C2 domain containing protein, putative, expressed	chr1	1596486	1603610	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g49570	domain of unknown function, DUF250 domain containing protein, expressed	gene	domain of unknown function, DUF250 domain containing protein, expressed	chr3	28222342	28227147	+	CDS,three_prime_UTR
3	LOC_Os11g40100	GRF-interacting factor 2, putative, expressed	gene	GRF-interacting factor 2, putative, expressed	chr11	23447472	23451072	-	CDS,promoter
3	LOC_Os08g05690	ABC transporter, ATP-binding protein, putative	gene	ABC transporter, ATP-binding protein, putative	chr8	3049171	3055076	+	CDS,promoter
3	LOC_Os02g35860	expressed protein	gene	expressed protein	chr2	21537741	21543073	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g04530	GYF domain containing protein, putative, expressed	gene	GYF domain containing protein, putative, expressed	chr7	1995747	2005000	+	CDS,three_prime_UTR
3	LOC_Os02g52860	phosphate carrier protein, mitochondrial precursor, putative, expressed	gene	phosphate carrier protein, mitochondrial precursor, putative, expressed	chr2	32313495	32317463	-	CDS,three_prime_UTR
3	LOC_Os01g72690	NAD kinase, putative, expressed	gene	NAD kinase, putative, expressed	chr1	42176788	42182683	+	CDS
3	LOC_Os02g44704	LYR motif containing protein, putative, expressed	gene	LYR motif containing protein, putative, expressed	chr2	27078493	27081633	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os05g01730	drought induced 19 protein, putative, expressed	gene	drought induced 19 protein, putative, expressed	chr5	446349	449268	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g39090	coiled-coil domain containing 49, putative, expressed	gene	coiled-coil domain containing 49, putative, expressed	chr8	24692973	24696185	-	CDS,promoter,downstream
3	LOC_Os06g46700	expressed protein	gene	expressed protein	chr6	28367889	28370714	-	CDS,promoter
3	LOC_Os02g32160	copine, putative, expressed	gene	copine, putative, expressed	chr2	18988145	18995211	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g68680	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr1	39879964	39889754	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g70380	serine palmitoyltransferase 2, putative, expressed	gene	serine palmitoyltransferase 2, putative, expressed	chr1	40773455	40777561	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g28590	bg55, putative, expressed	gene	bg55, putative, expressed	chr6	16263256	16269838	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os04g33300	amino acid kinase, putative, expressed	gene	amino acid kinase, putative, expressed	chr4	19966920	19969906	+	CDS,three_prime_UTR
3	LOC_Os02g13300	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr2	7083194	7087390	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g01550	leucine rich repeat domain containing protein, putative, expressed	gene	leucine rich repeat domain containing protein, putative, expressed	chr7	342926	349103	+	CDS
3	LOC_Os06g19730	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr6	11263737	11280719	+	CDS
3	LOC_Os06g36320	receptor-like protein kinase 5 precursor, putative, expressed	gene	receptor-like protein kinase 5 precursor, putative, expressed	chr6	21278313	21281211	+	five_prime_UTR,CDS,promoter
3	LOC_Os03g05760	transcription factor Dp, putative, expressed	gene	transcription factor Dp, putative, expressed	chr3	2869358	2874826	+	CDS
3	LOC_Os07g42820	ADP-ribosylation factor, putative, expressed	gene	ADP-ribosylation factor, putative, expressed	chr7	25644994	25648168	-	CDS,promoter
3	LOC_Os01g25920	expressed protein	gene	expressed protein	chr1	14701279	14704972	-	three_prime_UTR
3	LOC_Os02g14290	scramblase, putative, expressed	gene	scramblase, putative, expressed	chr2	7845553	7852176	-	CDS,three_prime_UTR
3	LOC_Os06g06960	S-locus-like receptor protein kinase, putative, expressed	gene	S-locus-like receptor protein kinase, putative, expressed	chr6	3304185	3306862	-	five_prime_UTR,CDS,downstream
3	LOC_Os07g18120	aldehyde oxidase, putative, expressed	gene	aldehyde oxidase, putative, expressed	chr7	10723605	10737025	+	CDS,three_prime_UTR
3	LOC_Os12g37400	MCM7 - Putative minichromosome maintenance MCM complex subunit 7, expressed	gene	MCM7 - Putative minichromosome maintenance MCM complex subunit 7, expressed	chr12	22920528	22925863	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g02720	SNARE domain containing protein, putative, expressed	gene	SNARE domain containing protein, putative, expressed	chr2	1022071	1024751	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g51390	mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed	gene	mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed	chr1	29543616	29547479	+	CDS
3	LOC_Os07g46430	expressed protein	gene	expressed protein	chr7	27700519	27704197	-	CDS,three_prime_UTR,downstream
3	LOC_Os04g52060	transposable element protein, putative, containing Pfam profile: PF03004, Transposase_24, expressed	gene	transposable element protein, putative, containing Pfam profile: PF03004, Transposase_24, expressed	chr4	30735433	30740453	-	CDS
3	LOC_Os02g43080	PPR repeat domain containing protein, putative	gene	PPR repeat domain containing protein, putative	chr2	25934472	25938241	+	CDS,downstream
3	LOC_Os12g43720	early-responsive to dehydration protein-related, putative, expressed	gene	early-responsive to dehydration protein-related, putative, expressed	chr12	27120849	27126861	-	CDS,three_prime_UTR
3	LOC_Os07g48760	CAMK_KIN1/SNF1/Nim1_like.32 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_KIN1/SNF1/Nim1_like.32 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr7	29189290	29193564	+	three_prime_UTR,downstream
3	LOC_Os08g29660	OsWRKY69 - Superfamily of TFs having WRKY and zinc finger domains, expressed	gene	OsWRKY69 - Superfamily of TFs having WRKY and zinc finger domains, expressed	chr8	18217328	18219695	+	three_prime_UTR
3	LOC_Os06g04810	leucine rich repeat protein, putative, expressed	gene	leucine rich repeat protein, putative, expressed	chr6	2094567	2097814	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g37770	RWD domain containing protein, expressed	gene	RWD domain containing protein, expressed	chr1	21123811	21127312	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g55420	leucine-rich repeat family protein, putative, expressed	gene	leucine-rich repeat family protein, putative, expressed	chr4	32778159	32781891	+	CDS
3	LOC_Os02g40000	trafficking protein particle complex subunit, putative, expressed	gene	trafficking protein particle complex subunit, putative, expressed	chr2	24190188	24195562	+	CDS,three_prime_UTR
3	LOC_Os01g06460	uncharacterized Cys-rich domain containing protein, putative, expressed	gene	uncharacterized Cys-rich domain containing protein, putative, expressed	chr1	3043483	3046221	+	CDS,three_prime_UTR
3	LOC_Os02g14980	calcium-binding EF hand family protein, putative, expressed	gene	calcium-binding EF hand family protein, putative, expressed	chr2	8358768	8362959	+	CDS,three_prime_UTR
3	LOC_Os01g72880	DNA mismatch repair protein Mlh1, putative, expressed	gene	DNA mismatch repair protein Mlh1, putative, expressed	chr1	42267836	42273869	+	CDS
3	LOC_Os06g16410	armadillo/beta-catenin repeat family protein, putative, expressed	gene	armadillo/beta-catenin repeat family protein, putative, expressed	chr6	9367197	9370952	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g57710	signal peptide peptidase-like 2B, putative, expressed	gene	signal peptide peptidase-like 2B, putative, expressed	chr2	35335850	35341588	+	CDS
3	LOC_Os05g05220	glioma tumor suppressor candidate region gene 2 protein, putative, expressed	gene	glioma tumor suppressor candidate region gene 2 protein, putative, expressed	chr5	2541317	2545952	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g38525	expressed protein	gene	expressed protein	chr4	22701532	22707395	+	CDS
3	LOC_Os07g05610	zinc ion binding protein, putative, expressed	gene	zinc ion binding protein, putative, expressed	chr7	2633332	2639491	-	CDS,three_prime_UTR
3	LOC_Os02g31290	AML1, putative, expressed	gene	AML1, putative, expressed	chr2	18763850	18772154	+	CDS,three_prime_UTR
3	LOC_Os04g42250	transferase family protein, putative, expressed	gene	transferase family protein, putative, expressed	chr4	24808692	24814461	+	CDS
3	LOC_Os01g58390	haloacid dehalogenase, putative, expressed	gene	haloacid dehalogenase, putative, expressed	chr1	33732078	33734556	-	three_prime_UTR,promoter
3	LOC_Os02g37090	hydrolase, alpha/beta fold family domain containing protein, expressed	gene	hydrolase, alpha/beta fold family domain containing protein, expressed	chr2	22420365	22423036	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os05g05240	serine/threonine protein phosphatase, putative, expressed	gene	serine/threonine protein phosphatase, putative, expressed	chr5	2564197	2573134	+	CDS,three_prime_UTR
3	LOC_Os03g50620	ATP binding protein, putative, expressed	gene	ATP binding protein, putative, expressed	chr3	28894097	28899981	+	CDS
3	LOC_Os06g47580	REV1, putative, expressed	gene	REV1, putative, expressed	chr6	28805703	28815146	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g68160	ZOS1-22 - C2H2 zinc finger protein, expressed	gene	ZOS1-22 - C2H2 zinc finger protein, expressed	chr1	39615154	39632811	-	three_prime_UTR,CDS
3	LOC_Os03g56410	expressed protein	gene	expressed protein	chr3	32146758	32150308	+	CDS,three_prime_UTR
3	LOC_Os04g57730	uracil-DNA glycosylase, putative, expressed	gene	uracil-DNA glycosylase, putative, expressed	chr4	34198553	34202791	-	CDS
3	LOC_Os06g46065	expressed protein	gene	expressed protein	chr6	27928737	27931435	-	CDS
3	LOC_Os01g10140	RNA-dependent RNA polymerase, putative, expressed	gene	RNA-dependent RNA polymerase, putative, expressed	chr1	5306412	5317623	-	CDS,five_prime_UTR
3	LOC_Os05g49470	THO complex subunit 7, putative, expressed	gene	THO complex subunit 7, putative, expressed	chr5	28294371	28296432	-	CDS
3	LOC_Os06g27790	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr6	15732747	15736720	+	three_prime_UTR,downstream
3	LOC_Os02g57760	O-methyltransferase, putative, expressed	gene	O-methyltransferase, putative, expressed	chr2	35364646	35367989	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os12g36910	calmodulin binding protein, putative, expressed	gene	calmodulin binding protein, putative, expressed	chr12	22595198	22599522	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g13350	25.3 kDa vesicle transport protein, putative, expressed	gene	25.3 kDa vesicle transport protein, putative, expressed	chr1	7436788	7442252	-	CDS,three_prime_UTR
3	LOC_Os07g22534	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr7	12675097	12683327	-	CDS,three_prime_UTR
3	LOC_Os01g63250	josephin, putative, expressed	gene	josephin, putative, expressed	chr1	36655297	36659725	-	CDS
3	LOC_Os03g60710	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr3	34495815	34501028	+	CDS,three_prime_UTR
3	LOC_Os05g18770	Sad1 / UNC-like C-terminal domain containing protein, putative, expressed	gene	Sad1 / UNC-like C-terminal domain containing protein, putative, expressed	chr5	10883292	10886698	-	CDS,three_prime_UTR
3	LOC_Os03g42820	LIM domain-containing protein, putative, expressed	gene	LIM domain-containing protein, putative, expressed	chr3	23853318	23860115	+	CDS
3	LOC_Os03g63670	expressed protein	gene	expressed protein	chr3	35957730	35961273	-	three_prime_UTR,promoter,downstream
3	LOC_Os07g37740	secretory carrier-associated membrane protein, putative, expressed	gene	secretory carrier-associated membrane protein, putative, expressed	chr7	22626703	22631264	-	CDS
3	LOC_Os08g30930	expressed protein	gene	expressed protein	chr8	19092012	19096227	+	CDS,three_prime_UTR
3	LOC_Os07g48290	AGC_AGC_other_RS6K_like.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed	gene	AGC_AGC_other_RS6K_like.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed	chr7	28854803	28858816	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g27610	conserved hypothetical protein	gene	conserved hypothetical protein	chr9	16780151	16783470	+	CDS,downstream
3	LOC_Os02g35160	ligatin, putative, expressed	gene	ligatin, putative, expressed	chr2	21109486	21116265	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g20890	expressed protein	gene	expressed protein	chr1	11661697	11665321	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os09g37580	conserved hypothetical protein	gene	conserved hypothetical protein	chr9	21655731	21663947	+	CDS,promoter
3	LOC_Os03g11970	tubulin/FtsZ domain containing protein, putative, expressed	gene	tubulin/FtsZ domain containing protein, putative, expressed	chr3	6274796	6278582	-	CDS
3	LOC_Os01g05090	expressed protein	gene	expressed protein	chr1	2385373	2387611	+	three_prime_UTR,downstream
3	LOC_Os05g28720	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr5	16785546	16787668	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g02390	vacuolar-sorting receptor precursor, putative, expressed	gene	vacuolar-sorting receptor precursor, putative, expressed	chr12	782540	787120	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g16110	Ser/Thr protein phosphatase family protein, putative, expressed	gene	Ser/Thr protein phosphatase family protein, putative, expressed	chr3	8883104	8888720	+	three_prime_UTR
3	LOC_Os01g72570	expressed protein	gene	expressed protein	chr1	42085432	42094847	+	CDS
3	LOC_Os11g42510	tyrosine aminotransferase, putative, expressed	gene	tyrosine aminotransferase, putative, expressed	chr11	25130276	25137328	-	CDS,three_prime_UTR
3	LOC_Os09g32500	60S ribosomal protein L32, putative, expressed	gene	60S ribosomal protein L32, putative, expressed	chr9	19398498	19400662	+	three_prime_UTR,downstream
3	LOC_Os02g55020	uncharacterized PPR-repeat protein, putative, expressed	gene	uncharacterized PPR-repeat protein, putative, expressed	chr2	33700647	33702979	+	three_prime_UTR,promoter,downstream
3	LOC_Os03g50885	actin, putative, expressed	gene	actin, putative, expressed	chr3	29067047	29068922	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g44400	POK1, putative, expressed	gene	POK1, putative, expressed	chr7	26526827	26529898	-	CDS,three_prime_UTR
3	LOC_Os03g46230	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr3	26132646	26135912	-	CDS
3	LOC_Os04g58020	MYB_Al protein, putative, expressed	gene	MYB_Al protein, putative, expressed	chr4	34370020	34374451	-	CDS,three_prime_UTR
3	LOC_Os01g39134	EF hand family protein, putative, expressed	gene	EF hand family protein, putative, expressed	chr1	22020802	22026224	-	CDS,three_prime_UTR
3	LOC_Os05g30350	Os5bglu22 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed	gene	Os5bglu22 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed	chr5	17534552	17540156	+	CDS
3	LOC_Os01g42030	mitochondrial chaperone BCS1, putative, expressed	gene	mitochondrial chaperone BCS1, putative, expressed	chr1	23837824	23839915	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g51154	single myb histone, putative, expressed	gene	single myb histone, putative, expressed	chr1	29404578	29410331	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g06250	tetraspanin family protein, putative, expressed	gene	tetraspanin family protein, putative, expressed	chr8	3442463	3446047	+	CDS,three_prime_UTR
3	LOC_Os11g09670	OsFBX409 - F-box domain containing protein, expressed	gene	OsFBX409 - F-box domain containing protein, expressed	chr11	5160243	5162497	-	CDS,three_prime_UTR
3	LOC_Os02g18820	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr2	10972700	10986656	-	CDS,three_prime_UTR
3	LOC_Os01g48760	THAP domain-containing protein 4, putative, expressed	gene	THAP domain-containing protein 4, putative, expressed	chr1	27960695	27964400	+	three_prime_UTR,downstream
3	LOC_Os10g26660	expressed protein	gene	expressed protein	chr10	13848692	13854411	+	CDS,three_prime_UTR
3	LOC_Os11g10420	phosphatidylinositol kinase, putative, expressed	gene	phosphatidylinositol kinase, putative, expressed	chr11	5648955	5659335	-	three_prime_UTR,CDS
3	LOC_Os04g41580	glycine-rich protein, putative, expressed	gene	glycine-rich protein, putative, expressed	chr4	24482123	24485845	-	CDS,three_prime_UTR
3	LOC_Os02g04680	OsSPL3 - SBP-box gene family member, expressed	gene	OsSPL3 - SBP-box gene family member, expressed	chr2	2105726	2110544	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g20470	MATE efflux family protein, putative, expressed	gene	MATE efflux family protein, putative, expressed	chr10	10230396	10233216	-	CDS,three_prime_UTR
3	LOC_Os03g07410	expressed protein	gene	expressed protein	chr3	3759439	3761376	-	three_prime_UTR
3	LOC_Os03g38730	peroxisomal membrane protein, putative, expressed	gene	peroxisomal membrane protein, putative, expressed	chr3	21496567	21499125	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g35990	RNAse P Rpr2/Rpp21 subunit domain containing protein, expressed	gene	RNAse P Rpr2/Rpp21 subunit domain containing protein, expressed	chr1	19910178	19913235	-	CDS
3	LOC_Os02g40784	WAX2, putative, expressed	gene	WAX2, putative, expressed	chr2	24712178	24718251	-	CDS
3	LOC_Os04g04320	expressed protein	gene	expressed protein	chr4	2014816	2022040	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g29600	OsWAK85 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK	gene	OsWAK85 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK	chr9	18001497	18007035	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g68010	TBC domain containing protein, expressed	gene	TBC domain containing protein, expressed	chr1	39537100	39540053	-	three_prime_UTR,CDS
3	LOC_Os08g23720	glucan endo-1,3-beta-glucosidase precursor, putative, expressed	gene	glucan endo-1,3-beta-glucosidase precursor, putative, expressed	chr8	14346632	14351923	+	CDS
3	LOC_Os10g25010	OsCML8 - Calmodulin-related calcium sensor protein, expressed	gene	OsCML8 - Calmodulin-related calcium sensor protein, expressed	chr10	12799700	12802902	-	CDS
3	LOC_Os05g51450	OsClp8 - Putative Clp protease homologue, expressed	gene	OsClp8 - Putative Clp protease homologue, expressed	chr5	29433152	29436834	-	CDS,three_prime_UTR
3	LOC_Os12g37770	RGH1A, putative, expressed	gene	RGH1A, putative, expressed	chr12	23157174	23162441	+	CDS,downstream
3	LOC_Os02g54790	hypothetical protein	gene	hypothetical protein	chr2	33546302	33550653	+	CDS,promoter
3	LOC_Os03g59700	peptidyl-prolyl cis-trans isomerase, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, putative, expressed	chr3	33988455	33991553	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g03060	cyclin-dependent kinase A-2, putative, expressed	gene	cyclin-dependent kinase A-2, putative, expressed	chr2	1207635	1211226	+	CDS,three_prime_UTR
3	LOC_Os03g29830	expressed protein	gene	expressed protein	chr3	16998014	17001186	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g01370	hypothetical protein	gene	hypothetical protein	chr2	207750	209337	+	CDS,promoter
3	LOC_Os08g13699	expressed protein	gene	expressed protein	chr8	8158955	8161764	-	CDS,three_prime_UTR
3	LOC_Os05g43230	oryzain alpha chain precursor, putative, expressed	gene	oryzain alpha chain precursor, putative, expressed	chr5	25091323	25095076	+	CDS
3	LOC_Os11g33090	amidase, putative, expressed	gene	amidase, putative, expressed	chr11	19106088	19110227	-	CDS
3	LOC_Os02g33400	OsFBL9 - F-box domain and LRR containing protein, expressed	gene	OsFBL9 - F-box domain and LRR containing protein, expressed	chr2	19836320	19839300	-	CDS,three_prime_UTR
3	LOC_Os09g32940	expressed protein	gene	expressed protein	chr9	19630152	19634285	+	CDS,three_prime_UTR
3	LOC_Os06g33330	powdery mildew resistant protein 5, putative, expressed	gene	powdery mildew resistant protein 5, putative, expressed	chr6	19414172	19417496	+	CDS,downstream
3	LOC_Os01g50760	polyprenyl synthetase, putative, expressed	gene	polyprenyl synthetase, putative, expressed	chr1	29157218	29161673	+	CDS,three_prime_UTR
3	LOC_Os06g49800	ubiquitin interaction motif family protein, expressed	gene	ubiquitin interaction motif family protein, expressed	chr6	30127199	30133099	-	CDS,promoter
3	LOC_Os10g31990	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr10	16734455	16739419	-	CDS,downstream
3	LOC_Os03g16740	protein kinase APK1A, chloroplast precursor, putative, expressed	gene	protein kinase APK1A, chloroplast precursor, putative, expressed	chr3	9268427	9272518	-	three_prime_UTR,promoter
3	LOC_Os04g50790	RNA recognition motif, putative, expressed	gene	RNA recognition motif, putative, expressed	chr4	29861624	29865478	-	CDS,three_prime_UTR
3	LOC_Os11g10340	OsFBX417 - F-box domain containing protein, expressed	gene	OsFBX417 - F-box domain containing protein, expressed	chr11	5611190	5614179	-	CDS,three_prime_UTR
3	LOC_Os01g69060	hydrolase, alpha/beta fold family domain containing protein, expressed	gene	hydrolase, alpha/beta fold family domain containing protein, expressed	chr1	40132019	40137308	+	three_prime_UTR,downstream
3	LOC_Os01g36870	phox domain-containing protein, putative, expressed	gene	phox domain-containing protein, putative, expressed	chr1	20534041	20537900	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g52750	cyclin, putative, expressed	gene	cyclin, putative, expressed	chr3	30228922	30234229	+	CDS,three_prime_UTR
3	LOC_Os10g39510	expressed protein	gene	expressed protein	chr10	21033588	21037518	+	CDS,downstream
3	LOC_Os04g47410	DHHC zinc finger domain containing protein, expressed	gene	DHHC zinc finger domain containing protein, expressed	chr4	27945970	27951649	+	CDS
3	LOC_Os01g48850	auxin-responsive protein, putative, expressed	gene	auxin-responsive protein, putative, expressed	chr1	28027694	28030987	-	CDS,three_prime_UTR
3	LOC_Os12g07120	GATA zinc finger domain containing protein, expressed	gene	GATA zinc finger domain containing protein, expressed	chr12	3494954	3496836	+	three_prime_UTR,downstream
3	LOC_Os05g32680	PAC, putative, expressed	gene	PAC, putative, expressed	chr5	19067808	19073426	+	CDS,three_prime_UTR
3	LOC_Os07g43530	helix-loop-helix DNA-binding domain containing protein, expressed	gene	helix-loop-helix DNA-binding domain containing protein, expressed	chr7	26038684	26041232	-	CDS
3	LOC_Os04g37810	expressed protein	gene	expressed protein	chr4	22287071	22294592	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g15730	S-RNase-binding protein, putative, expressed	gene	S-RNase-binding protein, putative, expressed	chr3	8672536	8675520	+	CDS
3	LOC_Os12g02570	expressed protein	gene	expressed protein	chr12	886161	889817	-	CDS,three_prime_UTR
3	LOC_Os07g10530	carboxyl-terminal peptidase, putative, expressed	gene	carboxyl-terminal peptidase, putative, expressed	chr7	5681012	5684299	+	three_prime_UTR,downstream
3	LOC_Os10g25487	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr10	13100007	13112357	+	five_prime_UTR,CDS
3	LOC_Os02g12490	expressed protein	gene	expressed protein	chr2	6529685	6533027	-	five_prime_UTR,CDS,downstream
3	LOC_Os02g50560	DSHCT domain containing protein, expressed	gene	DSHCT domain containing protein, expressed	chr2	30866902	30877002	+	CDS,three_prime_UTR
3	LOC_Os12g41715	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr12	25794758	25799294	-	CDS,three_prime_UTR
3	LOC_Os09g32660	expressed protein	gene	expressed protein	chr9	19478243	19481683	-	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os01g42080	zinc ion binding protein, putative, expressed	gene	zinc ion binding protein, putative, expressed	chr1	23854684	23860796	+	CDS,three_prime_UTR
3	LOC_Os04g35290	OsPDIL5-2  protein disulfide isomerase PDIL5-2, expressed	gene	OsPDIL5-2  protein disulfide isomerase PDIL5-2, expressed	chr4	21290084	21293095	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g10630	expressed protein	gene	expressed protein	chr1	5674585	5678551	-	three_prime_UTR,promoter
3	LOC_Os01g12340	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr1	6734758	6745298	-	CDS
3	LOC_Os05g43170	calreticulin precursor protein, putative, expressed	gene	calreticulin precursor protein, putative, expressed	chr5	24992126	24996606	+	CDS
3	LOC_Os09g36890	hydroxyproline-rich glycoprotein family protein, putative, expressed	gene	hydroxyproline-rich glycoprotein family protein, putative, expressed	chr9	21273156	21275826	-	three_prime_UTR,promoter
3	LOC_Os02g48460	NAD dependent epimerase/dehydratase family protein, putative, expressed	gene	NAD dependent epimerase/dehydratase family protein, putative, expressed	chr2	29664897	29668536	+	CDS
3	LOC_Os01g56510	periplasmic beta-glucosidase precursor, putative, expressed	gene	periplasmic beta-glucosidase precursor, putative, expressed	chr1	32579666	32585099	-	CDS,three_prime_UTR,downstream
3	LOC_Os08g04120	expressed protein	gene	expressed protein	chr8	1999180	2004230	-	CDS
3	LOC_Os06g21470	expressed protein	gene	expressed protein	chr6	12402413	12409356	+	CDS,three_prime_UTR
3	LOC_Os02g17990	Leucine Rich Repeat family protein, expressed	gene	Leucine Rich Repeat family protein, expressed	chr2	10437391	10440984	+	CDS,three_prime_UTR
3	LOC_Os02g51070	starch synthase, putative, expressed	gene	starch synthase, putative, expressed	chr2	31227019	31232341	-	CDS
3	LOC_Os05g06050	N-acetylglucosaminyltransferase, putative	gene	N-acetylglucosaminyltransferase, putative	chr5	3030900	3033189	+	CDS,downstream
3	LOC_Os01g07750	expressed protein	gene	expressed protein	chr1	3719115	3722166	-	CDS,three_prime_UTR,downstream
3	LOC_Os06g34040	DJ-1 family protein, putative, expressed	gene	DJ-1 family protein, putative, expressed	chr6	19823524	19828660	-	CDS,three_prime_UTR
3	LOC_Os09g05030	armadillo/beta-catenin-like repeat family protein, expressed	gene	armadillo/beta-catenin-like repeat family protein, expressed	chr9	2702211	2706348	-	three_prime_UTR,promoter
3	LOC_Os02g04010	cyclin-T1-1, putative, expressed	gene	cyclin-T1-1, putative, expressed	chr2	1733994	1737711	-	CDS,three_prime_UTR
3	LOC_Os05g37700	periplasmic beta-glucosidase precursor, putative, expressed	gene	periplasmic beta-glucosidase precursor, putative, expressed	chr5	22005853	22010347	+	three_prime_UTR,CDS
3	LOC_Os12g16480	conserved hypothetical protein	gene	conserved hypothetical protein	chr12	9433343	9435606	-	CDS,downstream
3	LOC_Os01g59270	unknown	gene	unknown	chr1	34259664	34260494	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os08g14580	haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed	gene	haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed	chr8	8766730	8770587	-	CDS,three_prime_UTR
3	LOC_Os06g36700	T-complex protein, putative, expressed	gene	T-complex protein, putative, expressed	chr6	21597232	21601690	-	CDS,three_prime_UTR
3	LOC_Os01g16290	DNA gyrase subunit B, chloroplast/mitochondrial precursor, putative, expressed	gene	DNA gyrase subunit B, chloroplast/mitochondrial precursor, putative, expressed	chr1	9224213	9236059	+	CDS,three_prime_UTR
3	LOC_Os05g38480	kinesin motor domain containing protein, putative, expressed	gene	kinesin motor domain containing protein, putative, expressed	chr5	22511494	22515134	+	three_prime_UTR,downstream
3	LOC_Os04g39130	conserved hypothetical protein	gene	conserved hypothetical protein	chr4	23087468	23090217	+	CDS
3	LOC_Os08g03560	chloroplast unusual positioning protein, putative, expressed	gene	chloroplast unusual positioning protein, putative, expressed	chr8	1652276	1657527	-	CDS,three_prime_UTR
3	LOC_Os07g41640	agenet domain-containing protein, putative, expressed	gene	agenet domain-containing protein, putative, expressed	chr7	24955207	24959658	+	CDS,three_prime_UTR
3	LOC_Os10g42780	lrgB-like family protein, expressed	gene	lrgB-like family protein, expressed	chr10	23003869	23007548	-	CDS,three_prime_UTR,downstream
3	LOC_Os06g49320	glycosyltransferase, putative, expressed	gene	glycosyltransferase, putative, expressed	chr6	29881899	29885730	-	three_prime_UTR,promoter
3	LOC_Os01g58240	OsSub6 - Putative Subtilisin homologue, expressed	gene	OsSub6 - Putative Subtilisin homologue, expressed	chr1	33658738	33671494	+	CDS
3	LOC_Os01g17070	OsDegp1 - Putative Deg protease homologue, expressed	gene	OsDegp1 - Putative Deg protease homologue, expressed	chr1	9815759	9821726	+	CDS
3	LOC_Os03g60800	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr3	34534427	34539021	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g16880	DnaK family protein, putative, expressed	gene	DnaK family protein, putative, expressed	chr3	9376828	9381528	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g14610	PSF2 - Putative GINS complex subunit, expressed	gene	PSF2 - Putative GINS complex subunit, expressed	chr1	8177899	8182108	-	CDS,three_prime_UTR
3	LOC_Os08g09310	hypothetical protein	gene	hypothetical protein	chr8	5399012	5399266	+	CDS,promoter,downstream
3	LOC_Os05g01060	expressed protein	gene	expressed protein	chr5	75185	83483	-	CDS
3	LOC_Os07g12830	cytochrome b5-like Heme/Steroid binding domain containing protein, expressed	gene	cytochrome b5-like Heme/Steroid binding domain containing protein, expressed	chr7	7346759	7350687	+	CDS,three_prime_UTR
3	LOC_Os12g23760	growth regulator related protein, putative, expressed	gene	growth regulator related protein, putative, expressed	chr12	13489373	13496616	+	CDS,three_prime_UTR
3	LOC_Os01g45620	CGMC_MAPKCMGC_2.5 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	gene	CGMC_MAPKCMGC_2.5 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	chr1	25916579	25921934	-	CDS,three_prime_UTR
3	LOC_Os02g36924	OsMADS27 - MADS-box family gene with MIKCc type-box, expressed	gene	OsMADS27 - MADS-box family gene with MIKCc type-box, expressed	chr2	22288788	22295939	+	CDS
3	LOC_Os10g33680	serine/threonine-protein phosphatase 2A regulatory subunit B subunitbeta, putative, expressed	gene	serine/threonine-protein phosphatase 2A regulatory subunit B subunitbeta, putative, expressed	chr10	17684562	17692423	+	CDS,three_prime_UTR
3	LOC_Os12g38780	diacylglycerol kinase 1, putative, expressed	gene	diacylglycerol kinase 1, putative, expressed	chr12	23790291	23795978	-	CDS,three_prime_UTR
3	LOC_Os03g54150	expressed protein	gene	expressed protein	chr3	31020366	31025454	+	CDS,three_prime_UTR
3	LOC_Os04g55080	cyclic nucleotide-gated ion channel, putative, expressed	gene	cyclic nucleotide-gated ion channel, putative, expressed	chr4	32568551	32573625	+	CDS
3	LOC_Os06g04300	tRNA 2-phosphotransferase 1, putative, expressed	gene	tRNA 2-phosphotransferase 1, putative, expressed	chr6	1821767	1825384	-	CDS
3	LOC_Os11g30370	OsSPL19 - SBP-box gene family member, expressed	gene	OsSPL19 - SBP-box gene family member, expressed	chr11	17165465	17175367	-	CDS,promoter
3	LOC_Os06g31210	methionyl-tRNA synthetase, putative, expressed	gene	methionyl-tRNA synthetase, putative, expressed	chr6	18144501	18153559	-	CDS,three_prime_UTR
3	LOC_Os07g15600	H-BTB6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed	gene	H-BTB6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed	chr7	9034966	9038231	-	CDS,three_prime_UTR
3	LOC_Os03g17120	arginine biosynthesis bifunctional protein argJ 1, putative, expressed	gene	arginine biosynthesis bifunctional protein argJ 1, putative, expressed	chr3	9505667	9509873	-	CDS,three_prime_UTR
3	LOC_Os05g37880	growth regulator related protein, putative, expressed	gene	growth regulator related protein, putative, expressed	chr5	22121621	22126564	+	CDS
3	LOC_Os08g05640	DUF1336 domain containing protein, expressed	gene	DUF1336 domain containing protein, expressed	chr8	3012721	3015333	-	three_prime_UTR,CDS,promoter
3	LOC_Os03g04100	expressed protein	gene	expressed protein	chr3	1872277	1877446	+	CDS,three_prime_UTR
3	LOC_Os10g36830	transmembrane and coiled-coil domain-containing protein 4, putative, expressed	gene	transmembrane and coiled-coil domain-containing protein 4, putative, expressed	chr10	19644238	19648615	-	CDS
3	LOC_Os04g03810	OsSub38 - Putative Subtilisin homologue, expressed	gene	OsSub38 - Putative Subtilisin homologue, expressed	chr4	1710201	1715904	+	CDS,three_prime_UTR
3	LOC_Os03g02150	adapitin protein, putative, expressed	gene	adapitin protein, putative, expressed	chr3	697191	707686	+	three_prime_UTR,CDS
3	LOC_Os01g16890	ribosomal protein L7Ae, putative, expressed	gene	ribosomal protein L7Ae, putative, expressed	chr1	9656956	9660255	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g27780	aminotransferase, putative, expressed	gene	aminotransferase, putative, expressed	chr7	16208154	16209662	-	three_prime_UTR,promoter
3	LOC_Os03g08370	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr3	4271872	4276476	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g34230	disease resistance protein RGA3, putative, expressed	gene	disease resistance protein RGA3, putative, expressed	chr5	20201134	20203954	-	three_prime_UTR,promoter
3	LOC_Os01g02420	protein kinase domain containing protein	gene	protein kinase domain containing protein	chr1	780442	783424	+	CDS,promoter
3	LOC_Os05g08370	CESA1 - cellulose synthase, expressed	gene	CESA1 - cellulose synthase, expressed	chr5	4565154	4571438	-	CDS
3	LOC_Os01g01390	expressed protein	gene	expressed protein	chr1	196647	199803	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g01610	FYVE zinc finger domain containing protein	gene	FYVE zinc finger domain containing protein	chr5	362500	365961	+	CDS
3	LOC_Os07g29220	Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed	gene	Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed	chr7	17114816	17119432	+	CDS
3	LOC_Os08g25390	bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor, putative, expressed	gene	bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor, putative, expressed	chr8	15436142	15447893	-	CDS
3	LOC_Os04g52520	APO, putative, expressed	gene	APO, putative, expressed	chr4	31040906	31045457	+	three_prime_UTR,CDS
3	LOC_Os02g35880	salt tolerant protein, putative, expressed	gene	salt tolerant protein, putative, expressed	chr2	21552903	21554894	-	three_prime_UTR,promoter,downstream
3	LOC_Os08g02360	exosome complex exonuclease, putative, expressed	gene	exosome complex exonuclease, putative, expressed	chr8	935011	939479	-	CDS,downstream
3	LOC_Os01g67740	chromosome segregation protein, putative, expressed	gene	chromosome segregation protein, putative, expressed	chr1	39364877	39373185	-	CDS,promoter,downstream
3	LOC_Os01g32790	expressed protein	gene	expressed protein	chr1	17993503	17996723	-	three_prime_UTR
3	LOC_Os11g06934	expressed protein	gene	expressed protein	chr11	3421725	3429337	+	CDS,three_prime_UTR
3	LOC_Os05g04560	expressed protein	gene	expressed protein	chr5	2122840	2127976	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g34480	expressed protein	gene	expressed protein	chr5	20380198	20383548	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g39840	expressed protein	gene	expressed protein	chr1	22470841	22473368	-	three_prime_UTR,promoter
3	LOC_Os04g58210	N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase, putative, expressed	gene	N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase, putative, expressed	chr4	34479826	34483597	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g51410	glycine dehydrogenase, putative, expressed	gene	glycine dehydrogenase, putative, expressed	chr1	29559305	29566020	+	CDS
3	LOC_Os06g16070	receptor-like protein kinase 2 precursor, putative	gene	receptor-like protein kinase 2 precursor, putative	chr6	9145960	9149342	-	CDS
3	LOC_Os03g10450	Sua5/YciO/YrdC/YwlC family protein, putative, expressed	gene	Sua5/YciO/YrdC/YwlC family protein, putative, expressed	chr3	5319785	5322970	-	CDS,three_prime_UTR,downstream
3	LOC_Os12g17880	armadillo/beta-catenin repeat protein-related, putative, expressed	gene	armadillo/beta-catenin repeat protein-related, putative, expressed	chr12	10251493	10254922	-	CDS
3	LOC_Os09g19150	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr9	11440885	11443550	-	CDS,three_prime_UTR
3	LOC_Os05g48880	expressed protein	gene	expressed protein	chr5	27977538	27980050	-	three_prime_UTR,CDS,promoter
3	LOC_Os08g43860	carrier, putative	gene	carrier, putative	chr8	27665622	27666329	+	CDS,promoter,downstream
3	LOC_Os03g59390	CAMK_CAMK_like.24 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.24 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr3	33798670	33802969	+	CDS
3	LOC_Os02g38300	SNF7 domain containing protein, putative, expressed	gene	SNF7 domain containing protein, putative, expressed	chr2	23153896	23157513	-	CDS,three_prime_UTR
3	LOC_Os03g60150	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr3	34195285	34199178	-	CDS,three_prime_UTR
3	LOC_Os01g57900	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr1	33477940	33480299	-	three_prime_UTR,promoter,downstream
3	LOC_Os11g22350	white-brown complex homolog protein, putative, expressed	gene	white-brown complex homolog protein, putative, expressed	chr11	12348280	12354622	-	CDS
3	LOC_Os11g05130	PHD-finger family protein, expressed	gene	PHD-finger family protein, expressed	chr11	2243564	2252027	-	CDS,three_prime_UTR,downstream
3	LOC_Os02g03850	glycosyltransferase, putative, expressed	gene	glycosyltransferase, putative, expressed	chr2	1631971	1636772	-	CDS,three_prime_UTR
3	LOC_Os02g55150	formin, putative, expressed	gene	formin, putative, expressed	chr2	33780355	33785117	-	CDS,promoter
3	LOC_Os05g06890	relA-SpoT like protein RSH4, putative, expressed	gene	relA-SpoT like protein RSH4, putative, expressed	chr5	3607479	3611348	+	CDS
3	LOC_Os05g19370	60S ribosomal protein L15, putative, expressed	gene	60S ribosomal protein L15, putative, expressed	chr5	11248070	11250178	+	CDS
3	LOC_Os02g17460	tesmin/TSO1-like CXC domain containing protein, expressed	gene	tesmin/TSO1-like CXC domain containing protein, expressed	chr2	10042476	10049189	-	CDS
3	LOC_Os04g54810	beta-D-xylosidase, putative, expressed	gene	beta-D-xylosidase, putative, expressed	chr4	32403831	32410784	-	CDS
3	LOC_Os03g50520	dynamin family protein, putative, expressed	gene	dynamin family protein, putative, expressed	chr3	28839875	28845822	+	CDS,three_prime_UTR
3	LOC_Os06g41040	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr6	24509258	24511552	-	CDS,promoter
3	LOC_Os09g32976	ribosomal protein L7Ae, putative, expressed	gene	ribosomal protein L7Ae, putative, expressed	chr9	19683131	19685463	-	CDS,three_prime_UTR
3	LOC_Os03g27320	steroid binding protein, putative, expressed	gene	steroid binding protein, putative, expressed	chr3	15647548	15650804	+	three_prime_UTR,CDS
3	LOC_Os11g43960	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr11	26078289	26080885	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os09g36420	hsp90 protein, expressed	gene	hsp90 protein, expressed	chr9	21011394	21019524	+	CDS
3	LOC_Os02g08090	LSM domain containing protein, expressed	gene	LSM domain containing protein, expressed	chr2	4270525	4274259	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os05g49380	OsDegp9 - Putative Deg protease homologue, expressed	gene	OsDegp9 - Putative Deg protease homologue, expressed	chr5	28251937	28256051	-	CDS,three_prime_UTR,downstream
3	LOC_Os12g02910	glycosyl transferase, family 8, putative, expressed	gene	glycosyl transferase, family 8, putative, expressed	chr12	1068974	1074419	-	CDS,three_prime_UTR
3	LOC_Os01g10340	expressed protein	gene	expressed protein	chr1	5434443	5441651	-	three_prime_UTR,promoter
3	LOC_Os05g34460	OsDegp7 - Putative Deg protease homologue, expressed	gene	OsDegp7 - Putative Deg protease homologue, expressed	chr5	20370838	20375404	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g03270	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr7	1312767	1315455	-	CDS,three_prime_UTR
3	LOC_Os03g15250	lectin-like receptor kinase, putative	gene	lectin-like receptor kinase, putative	chr3	8338879	8343579	-	CDS,promoter
3	LOC_Os06g16280	expressed protein	gene	expressed protein	chr6	9266069	9279990	-	CDS,promoter
3	LOC_Os03g08114	expressed protein	gene	expressed protein	chr3	4143022	4145641	-	three_prime_UTR
3	LOC_Os03g49720	PAP fibrillin family domain containing protein, expressed	gene	PAP fibrillin family domain containing protein, expressed	chr3	28298039	28300984	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os09g32800	peptidase, T1 family, putative, expressed	gene	peptidase, T1 family, putative, expressed	chr9	19561865	19565428	+	CDS,three_prime_UTR
3	LOC_Os01g55040	1,3-beta-glucan synthase component, putative, expressed	gene	1,3-beta-glucan synthase component, putative, expressed	chr1	31640187	31647712	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g49240	MRH1, putative, expressed	gene	MRH1, putative, expressed	chr7	29483529	29486446	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g35220	expressed protein	gene	expressed protein	chr4	21230441	21233439	-	CDS,three_prime_UTR
3	LOC_Os03g63730	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr3	35975421	35978691	+	CDS,three_prime_UTR
3	LOC_Os02g46510	adaptor complexes medium subunit family domain containing protein, expressed	gene	adaptor complexes medium subunit family domain containing protein, expressed	chr2	28349662	28354720	+	CDS,three_prime_UTR
3	LOC_Os01g27750	bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed	gene	bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed	chr1	15478942	15492523	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g35520	OsAPx7 - Stromal Ascorbate Peroxidase encoding gene 5,8, expressed	gene	OsAPx7 - Stromal Ascorbate Peroxidase encoding gene 5,8, expressed	chr4	21451003	21455365	-	CDS
3	LOC_Os07g04160	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	chr7	1776416	1779570	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g33514	expressed protein	gene	expressed protein	chr5	19622254	19624307	-	three_prime_UTR,promoter
3	LOC_Os04g37660	protein phosphotase protein, putative, expressed	gene	protein phosphotase protein, putative, expressed	chr4	22204186	22208714	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g42650	vegetative storage protein, putative, expressed	gene	vegetative storage protein, putative, expressed	chr3	23737059	23744313	+	three_prime_UTR
3	LOC_Os04g31900	calmodulin-binding transcription activator 4, putative, expressed	gene	calmodulin-binding transcription activator 4, putative, expressed	chr4	18933940	18941608	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g39960	dynamin family protein, putative, expressed	gene	dynamin family protein, putative, expressed	chr9	22911029	22916306	-	CDS
3	LOC_Os01g16960	pyruvate kinase, putative, expressed	gene	pyruvate kinase, putative, expressed	chr1	9693003	9698793	-	CDS,three_prime_UTR,five_prime_UTR
3	LOC_Os05g11550	serine/threonine protein phosphatase 5, putative, expressed	gene	serine/threonine protein phosphatase 5, putative, expressed	chr5	6529736	6537295	+	CDS,three_prime_UTR
3	LOC_Os02g57660	phosphatidylinositol-4-phosphate 5-kinase, putative, expressed	gene	phosphatidylinositol-4-phosphate 5-kinase, putative, expressed	chr2	35301523	35307766	-	CDS,promoter
3	LOC_Os03g62388	expressed protein	gene	expressed protein	chr3	35330798	35333453	-	CDS,promoter
3	LOC_Os10g31950	3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed	gene	3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed	chr10	16704034	16708457	+	CDS
3	LOC_Os10g35810	thylakoid lumenal protein, putative, expressed	gene	thylakoid lumenal protein, putative, expressed	chr10	19076172	19079469	-	CDS,three_prime_UTR
3	LOC_Os01g51250	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr1	29457599	29461990	+	CDS
3	LOC_Os12g01520	ubiquitin-activating enzyme, putative, expressed	gene	ubiquitin-activating enzyme, putative, expressed	chr12	311933	317602	-	CDS
3	LOC_Os12g43120	expressed protein	gene	expressed protein	chr12	26737124	26745515	-	CDS,three_prime_UTR
3	LOC_Os10g21020	expressed protein	gene	expressed protein	chr10	10582023	10583793	-	three_prime_UTR,promoter
3	LOC_Os08g06040	60S ribosomal protein L34, putative, expressed	gene	60S ribosomal protein L34, putative, expressed	chr8	3292126	3294912	+	CDS
3	LOC_Os12g38850	DUF1336 domain containing protein, expressed	gene	DUF1336 domain containing protein, expressed	chr12	23846311	23851435	+	CDS,three_prime_UTR
3	LOC_Os10g20240	syntaxin 6, N-terminal domain containing protein, expressed	gene	syntaxin 6, N-terminal domain containing protein, expressed	chr10	10099310	10103295	+	three_prime_UTR,downstream
3	LOC_Os02g20330	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	11969198	11976032	+	CDS,promoter,downstream
3	LOC_Os06g07080	pre-mRNA-processing-splicing factor 8, putative, expressed	gene	pre-mRNA-processing-splicing factor 8, putative, expressed	chr6	3362868	3367262	-	CDS,promoter
3	LOC_Os06g40240	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr6	23966711	23975390	+	CDS
3	LOC_Os04g58564	GA18008-PA, putative, expressed	gene	GA18008-PA, putative, expressed	chr4	34635436	34638142	-	CDS
3	LOC_Os01g14080	lipase class 3 family protein, putative, expressed	gene	lipase class 3 family protein, putative, expressed	chr1	7878931	7881632	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g04320	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr2	1902990	1905136	+	three_prime_UTR,downstream
3	LOC_Os05g40150	RGH2B, putative, expressed	gene	RGH2B, putative, expressed	chr5	23518396	23522821	-	CDS,downstream
3	LOC_Os01g27880	sucrose-phosphatase, putative, expressed	gene	sucrose-phosphatase, putative, expressed	chr1	15567750	15572351	-	CDS
3	LOC_Os03g48660	DUF1336 domain containing protein, expressed	gene	DUF1336 domain containing protein, expressed	chr3	27729344	27734566	-	CDS
3	LOC_Os02g46440	expressed protein	gene	expressed protein	chr2	28283896	28285814	-	three_prime_UTR,promoter
3	LOC_Os12g36760	expressed protein	gene	expressed protein	chr12	22485298	22495669	-	CDS,three_prime_UTR,downstream
3	LOC_Os09g35710	UBX domain-containing protein, putative, expressed	gene	UBX domain-containing protein, putative, expressed	chr9	20534789	20539776	-	CDS,three_prime_UTR
3	LOC_Os11g40140	peptidase, T1 family, putative, expressed	gene	peptidase, T1 family, putative, expressed	chr11	23472057	23476414	-	CDS,downstream
3	LOC_Os06g47940	nifU, putative, expressed	gene	nifU, putative, expressed	chr6	28992798	28994035	+	three_prime_UTR,downstream
3	LOC_Os08g34879	expressed protein	gene	expressed protein	chr8	21948926	21952845	-	three_prime_UTR
3	LOC_Os06g13000	ankyrin repeat domain-containing protein, chloroplast precursor, putative, expressed	gene	ankyrin repeat domain-containing protein, chloroplast precursor, putative, expressed	chr6	7120121	7122027	-	CDS,promoter
3	LOC_Os11g06810	expressed protein	gene	expressed protein	chr11	3328349	3334865	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g56550	transcription initiation factor IIF beta subunit, putative, expressed	gene	transcription initiation factor IIF beta subunit, putative, expressed	chr1	32597037	32600766	-	CDS,three_prime_UTR
3	LOC_Os07g40120	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr7	24070187	24072541	+	CDS,downstream
3	LOC_Os05g44922	6-phosphofructokinase, putative, expressed	gene	6-phosphofructokinase, putative, expressed	chr5	26044615	26049919	+	CDS,three_prime_UTR,promoter
3	LOC_Os08g21760	Rer1 protein, putative, expressed	gene	Rer1 protein, putative, expressed	chr8	13025880	13032040	-	CDS
3	LOC_Os07g01060	expressed protein	gene	expressed protein	chr7	35113	41299	+	CDS,three_prime_UTR
3	LOC_Os01g65900	chitin-inducible gibberellin-responsive protein, putative, expressed	gene	chitin-inducible gibberellin-responsive protein, putative, expressed	chr1	38260793	38264466	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g44550	CHCH domain containing protein, expressed	gene	CHCH domain containing protein, expressed	chr4	26186898	26190059	+	CDS,three_prime_UTR
3	LOC_Os01g40420	CBS domain containing membrane protein, putative, expressed	gene	CBS domain containing membrane protein, putative, expressed	chr1	22819176	22822138	-	CDS
3	LOC_Os05g02130	ankyrin repeat domain-containing protein 28, putative, expressed	gene	ankyrin repeat domain-containing protein 28, putative, expressed	chr5	639550	643320	-	three_prime_UTR,promoter
3	LOC_Os11g35870	RWD domain containing protein, expressed	gene	RWD domain containing protein, expressed	chr11	20584801	20590081	-	CDS,three_prime_UTR
3	LOC_Os03g04169	ATP phosphoribosyltransferase, putative, expressed	gene	ATP phosphoribosyltransferase, putative, expressed	chr3	1908197	1918537	+	CDS,three_prime_UTR
3	LOC_Os02g32860	poly synthetase 3, putative, expressed	gene	poly synthetase 3, putative, expressed	chr2	19503944	19509067	-	CDS
3	LOC_Os03g01970	THO complex subunit 1, putative, expressed	gene	THO complex subunit 1, putative, expressed	chr3	601459	608354	+	CDS,promoter
3	LOC_Os05g02400	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr5	788599	791693	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g55310	haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed	gene	haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed	chr1	31835451	31838592	-	CDS,promoter
3	LOC_Os03g63330	aspartokinase, chloroplast precursor, putative, expressed	gene	aspartokinase, chloroplast precursor, putative, expressed	chr3	35782916	35788365	+	CDS,three_prime_UTR
3	LOC_Os07g47350	potassium transporter, putative, expressed	gene	potassium transporter, putative, expressed	chr7	28311116	28316678	-	CDS
3	LOC_Os04g31910	expressed protein	gene	expressed protein	chr4	18941912	18944940	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g10190	DUF1680 domain containing protein, putative, expressed	gene	DUF1680 domain containing protein, putative, expressed	chr2	5339007	5344517	+	CDS,downstream
3	LOC_Os10g22370	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr10	11499817	11505384	-	CDS
3	LOC_Os01g35590	hypothetical protein	gene	hypothetical protein	chr1	19688414	19691909	+	CDS,downstream
3	LOC_Os02g48380	expressed protein	gene	expressed protein	chr2	29612661	29618595	+	CDS,three_prime_UTR
3	LOC_Os11g16310	expressed protein	gene	expressed protein	chr11	8984437	8989127	+	CDS
3	LOC_Os08g36840	glycoprotein 3-alpha-L-fucosyltransferase A, putative, expressed	gene	glycoprotein 3-alpha-L-fucosyltransferase A, putative, expressed	chr8	23270607	23278873	+	CDS
3	LOC_Os08g25720	pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed	gene	pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed	chr8	15655779	15661176	+	CDS
3	LOC_Os03g17900	hydrolase, alpha/beta fold family protein, putative, expressed	gene	hydrolase, alpha/beta fold family protein, putative, expressed	chr3	9971431	9976700	+	CDS,three_prime_UTR
3	LOC_Os01g54590	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr1	31402742	31406217	+	CDS,three_prime_UTR
3	LOC_Os07g28280	ubiquitin-related modifier 1, putative, expressed	gene	ubiquitin-related modifier 1, putative, expressed	chr7	16521451	16523094	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g04725	dolichol phosphate-mannose biosynthesis regulatory protein, putative, expressed	gene	dolichol phosphate-mannose biosynthesis regulatory protein, putative, expressed	chr2	2141637	2144272	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os04g25570	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr4	14811896	14817489	-	CDS,three_prime_UTR
3	LOC_Os04g42174	expressed protein	gene	expressed protein	chr4	24777696	24781406	+	three_prime_UTR
3	LOC_Os11g12750	unknown	gene	unknown	chr11	7195855	7210302	-	three_prime_UTR
3	LOC_Os07g45570	expressed protein	gene	expressed protein	chr7	27196505	27200421	+	CDS,three_prime_UTR
3	LOC_Os08g25060	BSD domain-containing protein, putative, expressed	gene	BSD domain-containing protein, putative, expressed	chr8	15200476	15209238	-	CDS,three_prime_UTR
3	LOC_Os03g49580	eukaryotic peptide chain release factor subunit 1-1, putative, expressed	gene	eukaryotic peptide chain release factor subunit 1-1, putative, expressed	chr3	28229247	28232431	+	CDS,three_prime_UTR
3	LOC_Os02g09130	palmitoyltransferase TIP1, putative, expressed	gene	palmitoyltransferase TIP1, putative, expressed	chr2	4681344	4689700	-	CDS,three_prime_UTR
3	LOC_Os01g33204	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr1	18283558	18287832	+	five_prime_UTR
3	LOC_Os05g23990	rp3 protein, putative, expressed	gene	rp3 protein, putative, expressed	chr5	13759681	13764820	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g48310	60S ribosomal protein L35a-3, putative, expressed	gene	60S ribosomal protein L35a-3, putative, expressed	chr5	27632664	27634880	+	three_prime_UTR
3	LOC_Os03g56610	expressed protein	gene	expressed protein	chr3	32237329	32239694	-	three_prime_UTR,promoter
3	LOC_Os06g02380	T-complex protein, putative, expressed	gene	T-complex protein, putative, expressed	chr6	810035	815535	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g34640	receptor-like protein kinase precursor, putative, expressed	gene	receptor-like protein kinase precursor, putative, expressed	chr8	21753813	21759439	-	CDS
3	LOC_Os10g30590	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr10	15847013	15852122	+	three_prime_UTR
3	LOC_Os07g22024	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr7	12312500	12324686	-	CDS,three_prime_UTR
3	LOC_Os11g24450	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr11	13477878	13481840	+	CDS,three_prime_UTR
3	LOC_Os03g16000	src homology-3 domain protein 3, putative, expressed	gene	src homology-3 domain protein 3, putative, expressed	chr3	8818082	8823271	+	CDS
3	LOC_Os01g22980	OsSCP3 - Putative Serine Carboxypeptidase homologue, expressed	gene	OsSCP3 - Putative Serine Carboxypeptidase homologue, expressed	chr1	12913922	12918184	-	CDS
3	LOC_Os09g07820	exosome complex exonuclease, putative, expressed	gene	exosome complex exonuclease, putative, expressed	chr9	3958855	3964192	+	CDS,three_prime_UTR
3	LOC_Os05g30250	Os5bglu19 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed	gene	Os5bglu19 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed	chr5	17469786	17474289	+	CDS,promoter
3	LOC_Os02g57870	expressed protein	gene	expressed protein	chr2	35427726	35429999	-	CDS,three_prime_UTR
3	LOC_Os02g52960	PHD-finger domain containing protein, putative, expressed	gene	PHD-finger domain containing protein, putative, expressed	chr2	32378762	32390225	+	CDS,three_prime_UTR
3	LOC_Os04g55810	expressed protein	gene	expressed protein	chr4	33040706	33045087	-	CDS
3	LOC_Os02g06910	auxin response factor 6, putative, expressed	gene	auxin response factor 6, putative, expressed	chr2	3486811	3492948	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g09500	hexokinase, putative, expressed	gene	hexokinase, putative, expressed	chr5	5337173	5341188	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g61800	polygalacturonase, putative, expressed	gene	polygalacturonase, putative, expressed	chr3	35030224	35034497	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g57510	SNARE domain containing protein, putative, expressed	gene	SNARE domain containing protein, putative, expressed	chr2	35228257	35232159	+	three_prime_UTR,downstream
3	LOC_Os01g53810	peptidase, putative, expressed	gene	peptidase, putative, expressed	chr1	30932190	30936331	-	CDS,three_prime_UTR
3	LOC_Os03g42050	exportin-7-A, putative, expressed	gene	exportin-7-A, putative, expressed	chr3	23367165	23380730	-	CDS,three_prime_UTR
3	LOC_Os06g02210	bark storage protein A precursor, putative, expressed	gene	bark storage protein A precursor, putative, expressed	chr6	677856	681798	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g30951	expressed protein	gene	expressed protein	chr10	16080172	16088862	-	three_prime_UTR,promoter,downstream
3	LOC_Os02g58500	phospholipase A2, putative, expressed	gene	phospholipase A2, putative, expressed	chr2	35764745	35766255	-	three_prime_UTR,downstream
3	LOC_Os02g07050	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr2	3614621	3617161	-	CDS,promoter
3	LOC_Os05g07040	PHD finger protein, putative, expressed	gene	PHD finger protein, putative, expressed	chr5	3697706	3702336	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g44440	multiple myeloma tumor-associated protein 2, putative, expressed	gene	multiple myeloma tumor-associated protein 2, putative, expressed	chr8	27956745	27960328	-	CDS
3	LOC_Os02g02530	signal peptide peptidase domain containing protein, expressed	gene	signal peptide peptidase domain containing protein, expressed	chr2	906564	911664	+	CDS,three_prime_UTR
3	LOC_Os07g33630	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr7	20086160	20092367	-	CDS,three_prime_UTR
3	LOC_Os04g02070	expressed protein	gene	expressed protein	chr4	660143	666571	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os03g15930	OTU-like cysteine protease family protein, putative, expressed	gene	OTU-like cysteine protease family protein, putative, expressed	chr3	8789685	8794676	+	CDS,three_prime_UTR
3	LOC_Os04g46620	T-complex protein, putative, expressed	gene	T-complex protein, putative, expressed	chr4	27452915	27458756	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g13720	expressed protein	gene	expressed protein	chr1	7676147	7677869	-	three_prime_UTR,promoter
3	LOC_Os03g18270	expressed protein	gene	expressed protein	chr3	10240165	10244955	-	CDS
3	LOC_Os06g30750	reticulon domain containing protein, putative, expressed	gene	reticulon domain containing protein, putative, expressed	chr6	17835889	17839922	+	CDS,three_prime_UTR
3	LOC_Os03g27260	40S ribosomal protein S6, putative, expressed	gene	40S ribosomal protein S6, putative, expressed	chr3	15620778	15623173	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g08260	pleiotropic drug resistance protein 4, putative, expressed	gene	pleiotropic drug resistance protein 4, putative, expressed	chr1	4032751	4036473	-	CDS,five_prime_UTR
3	LOC_Os09g36982	protein of unknown function DUF1279 domain containing protein, expressed	gene	protein of unknown function DUF1279 domain containing protein, expressed	chr9	21332768	21334623	-	three_prime_UTR,promoter
3	LOC_Os12g26850	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr12	15725852	15731668	-	CDS
3	LOC_Os05g49970	translation initiation factor IF-2, chloroplast precursor, putative, expressed	gene	translation initiation factor IF-2, chloroplast precursor, putative, expressed	chr5	28592085	28598718	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g38270	regulator of chromosome condensation, putative, expressed	gene	regulator of chromosome condensation, putative, expressed	chr5	22378004	22382773	-	CDS,three_prime_UTR
3	LOC_Os08g05830	transaldolase, putative, expressed	gene	transaldolase, putative, expressed	chr8	3127288	3131243	-	three_prime_UTR,CDS
3	LOC_Os04g25410	pentatricopeptide repeat domain containing protein, putative, expressed	gene	pentatricopeptide repeat domain containing protein, putative, expressed	chr4	14709246	14712836	-	CDS
3	LOC_Os10g31820	fluG, putative, expressed	gene	fluG, putative, expressed	chr10	16615599	16622388	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g28440	SNARE associated Golgi protein, putative, expressed	gene	SNARE associated Golgi protein, putative, expressed	chr7	16626506	16629925	-	CDS,promoter
3	LOC_Os07g28430	growth regulating factor protein, putative, expressed	gene	growth regulating factor protein, putative, expressed	chr7	16621554	16624299	+	three_prime_UTR,downstream
3	LOC_Os03g03640	expressed protein	gene	expressed protein	chr3	1608787	1610736	-	three_prime_UTR
3	LOC_Os07g44790	transport protein particle component, Bet3, domain containing protein, expressed	gene	transport protein particle component, Bet3, domain containing protein, expressed	chr7	26730012	26732361	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g32900	retinoblastoma-related protein-like, putative, expressed	gene	retinoblastoma-related protein-like, putative, expressed	chr11	18967142	18973591	+	CDS,three_prime_UTR
3	LOC_Os01g69090	CBS domain-containing protein, putative, expressed	gene	CBS domain-containing protein, putative, expressed	chr1	40152117	40156139	-	CDS
3	LOC_Os05g02790	KIP1, putative, expressed	gene	KIP1, putative, expressed	chr5	1004552	1007656	-	CDS,downstream
3	LOC_Os01g10130	RNA-dependent RNA polymerase, putative, expressed	gene	RNA-dependent RNA polymerase, putative, expressed	chr1	5287135	5292325	-	CDS,downstream
3	LOC_Os01g72230	stromal membrane-associated protein, putative, expressed	gene	stromal membrane-associated protein, putative, expressed	chr1	41881445	41885367	+	CDS
3	LOC_Os07g07950	type I inositol-1,4,5-trisphosphate 5-phosphatase, putative, expressed	gene	type I inositol-1,4,5-trisphosphate 5-phosphatase, putative, expressed	chr7	3990611	3995801	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g24220	villin protein, putative, expressed	gene	villin protein, putative, expressed	chr3	13775686	13787404	+	CDS,three_prime_UTR
3	LOC_Os12g32180	cornichon protein, putative, expressed	gene	cornichon protein, putative, expressed	chr12	19396282	19399935	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g17080	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr12	9775161	9779962	+	three_prime_UTR,downstream
3	LOC_Os08g41700	expressed protein	gene	expressed protein	chr8	26316559	26319811	-	CDS
3	LOC_Os02g47940	aminotransferase, classes I and II, domain containing protein, expressed	gene	aminotransferase, classes I and II, domain containing protein, expressed	chr2	29318842	29322756	-	CDS,three_prime_UTR
3	LOC_Os08g41690	expressed protein	gene	expressed protein	chr8	26312041	26315123	-	three_prime_UTR,promoter
3	LOC_Os08g29590	zinc finger, C3HC4 type family protein, expressed	gene	zinc finger, C3HC4 type family protein, expressed	chr8	18153994	18158268	+	CDS
3	LOC_Os02g14860	prefoldin subunit, putative, expressed	gene	prefoldin subunit, putative, expressed	chr2	8262545	8265722	+	CDS,three_prime_UTR
3	LOC_Os03g47070	RXW8, putative, expressed	gene	RXW8, putative, expressed	chr3	26616651	26619915	-	CDS
3	LOC_Os04g36800	3-oxoacyl-synthase, putative, expressed	gene	3-oxoacyl-synthase, putative, expressed	chr4	22031790	22036226	-	CDS,three_prime_UTR
3	LOC_Os04g52340	expressed protein	gene	expressed protein	chr4	30913363	30917919	-	CDS,three_prime_UTR
3	LOC_Os03g05200	DENN domain containing protein, expressed	gene	DENN domain containing protein, expressed	chr3	2515719	2524956	-	CDS,three_prime_UTR
3	LOC_Os03g17600	expressed protein	gene	expressed protein	chr3	9787809	9790798	+	CDS
3	LOC_Os09g19930	HOTHEAD precursor, putative, expressed	gene	HOTHEAD precursor, putative, expressed	chr9	11919506	11925038	-	five_prime_UTR,CDS,downstream
3	LOC_Os10g39200	expressed protein	gene	expressed protein	chr10	20858095	20863076	-	CDS
3	LOC_Os04g42420	nodulin, putative, expressed	gene	nodulin, putative, expressed	chr4	24916962	24922533	+	CDS,five_prime_UTR
3	LOC_Os12g31890	ureide permease, putative, expressed	gene	ureide permease, putative, expressed	chr12	19175442	19177772	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g45160	TENA/THI-4 family protein, putative, expressed	gene	TENA/THI-4 family protein, putative, expressed	chr8	28344523	28349037	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g46315	expressed protein	gene	expressed protein	chr7	27625775	27626791	+	CDS,promoter
3	LOC_Os10g32550	T-complex protein, putative, expressed	gene	T-complex protein, putative, expressed	chr10	16976813	16982217	+	CDS,promoter
3	LOC_Os01g62420	triosephosphate isomerase, cytosolic, putative, expressed	gene	triosephosphate isomerase, cytosolic, putative, expressed	chr1	36128267	36131677	+	CDS,three_prime_UTR,promoter
3	LOC_Os02g27960	expressed protein	gene	expressed protein	chr2	16544312	16547049	-	CDS,three_prime_UTR
3	LOC_Os09g15760	conserved hypothetical protein	gene	conserved hypothetical protein	chr9	9628853	9630895	+	CDS,promoter,downstream
3	LOC_Os09g38772	MOSC domain-containing protein, mitochondrial precursor, putative, expressed	gene	MOSC domain-containing protein, mitochondrial precursor, putative, expressed	chr9	22277811	22280568	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g38580	50S ribosomal protein L17, putative, expressed	gene	50S ribosomal protein L17, putative, expressed	chr5	22567710	22569937	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os11g47910	SCARECROW, putative	gene	SCARECROW, putative	chr11	28371966	28373753	+	CDS,promoter,downstream
3	LOC_Os09g20430	SCO1 protein homolog, mitochondrial precursor, putative, expressed	gene	SCO1 protein homolog, mitochondrial precursor, putative, expressed	chr9	12288591	12293954	-	CDS
3	LOC_Os10g36760	OsProCP3 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed	gene	OsProCP3 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed	chr10	19605667	19610994	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g18110	alpha-soluble NSF attachment protein, putative, expressed	gene	alpha-soluble NSF attachment protein, putative, expressed	chr8	11101728	11107281	+	CDS,three_prime_UTR
3	LOC_Os09g23350	trehalose synthase, putative, expressed	gene	trehalose synthase, putative, expressed	chr9	13874252	13878719	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g11240	expressed protein	gene	expressed protein	chr9	6242180	6244977	+	CDS,downstream
3	LOC_Os09g07510	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr9	3756920	3763491	-	CDS,three_prime_UTR
3	LOC_Os03g28410	ribosomal protein S2, putative	gene	ribosomal protein S2, putative	chr3	16362810	16365354	+	CDS,downstream
3	LOC_Os09g31280	OTU-like cysteine protease family protein, putative, expressed	gene	OTU-like cysteine protease family protein, putative, expressed	chr9	18804788	18807749	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g01140	AGC_PVPK_like_kin82y.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed	gene	AGC_PVPK_like_kin82y.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed	chr12	74281	88965	+	CDS,five_prime_UTR
3	LOC_Os11g31500	ATP binding protein, putative	gene	ATP binding protein, putative	chr11	17943595	17950401	-	CDS
3	LOC_Os06g09370	PTF1, putative, expressed	gene	PTF1, putative, expressed	chr6	4708744	4714553	-	CDS
3	LOC_Os12g16650	Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed	gene	Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed	chr12	9529283	9538466	+	CDS
3	LOC_Os07g49260	importin subunit beta, putative, expressed	gene	importin subunit beta, putative, expressed	chr7	29494922	29503041	+	CDS,downstream
3	LOC_Os12g40190	G-protein alpha subunit, putative, expressed	gene	G-protein alpha subunit, putative, expressed	chr12	24838937	24843804	-	CDS
3	LOC_Os01g74310	expressed protein	gene	expressed protein	chr1	43048118	43057805	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g51160	glycosyl transferase family 8, putative	gene	glycosyl transferase family 8, putative	chr6	30947621	30950472	-	CDS,promoter,downstream
3	LOC_Os02g04180	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr2	1826715	1829346	-	CDS,promoter
3	LOC_Os03g16450	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr3	9073249	9075799	+	three_prime_UTR,promoter
3	LOC_Os05g26914	chaperone protein dnaJ, putative, expressed	gene	chaperone protein dnaJ, putative, expressed	chr5	15569013	15575566	-	CDS,three_prime_UTR
3	LOC_Os01g69070	auxin efflux carrier component, putative, expressed	gene	auxin efflux carrier component, putative, expressed	chr1	40135182	40141721	-	CDS,three_prime_UTR
3	LOC_Os10g33874	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr10	17909066	17914228	+	three_prime_UTR
3	LOC_Os12g15470	OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed	gene	OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed	chr12	8826930	8832037	-	CDS,three_prime_UTR
3	LOC_Os12g27994	expressed protein	gene	expressed protein	chr12	16497492	16505181	-	CDS,three_prime_UTR
3	LOC_Os07g32340	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr7	19222935	19229487	+	CDS,downstream
3	LOC_Os02g57430	DNL zinc finger domain containing protein, putative, expressed	gene	DNL zinc finger domain containing protein, putative, expressed	chr2	35193546	35195059	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g10280	aquaporin protein, putative, expressed	gene	aquaporin protein, putative, expressed	chr12	5434949	5438531	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g36830	expressed protein	gene	expressed protein	chr11	21264689	21266932	-	CDS
3	LOC_Os03g39740	expressed protein	gene	expressed protein	chr3	22108925	22114984	-	CDS,three_prime_UTR
3	LOC_Os09g33630	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr9	19862703	19865820	+	CDS,three_prime_UTR
3	LOC_Os11g03380	expressed protein	gene	expressed protein	chr11	1273455	1278092	-	CDS,three_prime_UTR
3	LOC_Os12g09280	RNA polymerase subunit, putative, expressed	gene	RNA polymerase subunit, putative, expressed	chr12	4859177	4862153	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g41640	phosphoglycerate kinase protein, putative, expressed	gene	phosphoglycerate kinase protein, putative, expressed	chr5	24315782	24319183	-	three_prime_UTR,CDS,promoter
3	LOC_Os05g07860	uvrB/uvrC motif family protein, expressed	gene	uvrB/uvrC motif family protein, expressed	chr5	4243527	4246836	-	CDS,three_prime_UTR
3	LOC_Os07g27870	thioesterase family protein, putative, expressed	gene	thioesterase family protein, putative, expressed	chr7	16263716	16265604	+	three_prime_UTR,downstream
3	LOC_Os11g10240	OsFBX414 - F-box domain containing protein, expressed	gene	OsFBX414 - F-box domain containing protein, expressed	chr11	5553040	5555918	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g35340	TKL_IRAK_DUF26-lc.14 - DUF26 kinases have homology to DUF26 containing loci, expressed	gene	TKL_IRAK_DUF26-lc.14 - DUF26 kinases have homology to DUF26 containing loci, expressed	chr7	21145486	21148752	+	CDS,three_prime_UTR
3	LOC_Os06g49550	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr6	30007095	30009588	-	CDS,three_prime_UTR
3	LOC_Os01g09305	EMB1895, putative	gene	EMB1895, putative	chr1	4731052	4732048	-	five_prime_UTR,CDS,promoter,downstream
3	LOC_Os12g27370	expressed protein	gene	expressed protein	chr12	16089577	16100120	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os06g08110	nodulin, putative, expressed	gene	nodulin, putative, expressed	chr6	3933028	3936230	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g32910	expressed protein	gene	expressed protein	chr8	20399313	20403275	+	CDS,three_prime_UTR
3	LOC_Os08g05570	monodehydroascorbate reductase, putative, expressed	gene	monodehydroascorbate reductase, putative, expressed	chr8	2976383	2981703	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g49620	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	gene	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	chr3	28247473	28252934	-	CDS
3	LOC_Os01g53920	receptor-like protein kinase 5 precursor, putative, expressed	gene	receptor-like protein kinase 5 precursor, putative, expressed	chr1	31004982	31009379	+	three_prime_UTR,downstream
3	LOC_Os03g06330	tyrosine protein kinase domain containing protein, putative, expressed	gene	tyrosine protein kinase domain containing protein, putative, expressed	chr3	3164262	3167961	+	CDS
3	LOC_Os09g19560	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr9	11701887	11705371	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g14932	NAK-like ser/thr protein kinase, putative, expressed	gene	NAK-like ser/thr protein kinase, putative, expressed	chr1	8366184	8374401	-	CDS,three_prime_UTR
3	LOC_Os02g07250	peptidase, cysteine peptidase active site, putative, expressed	gene	peptidase, cysteine peptidase active site, putative, expressed	chr2	3720871	3724567	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g03690	beta-amylase, putative, expressed	gene	beta-amylase, putative, expressed	chr2	1539488	1548149	+	CDS
3	LOC_Os05g14300	ubiquitin-conjugating enzyme E2 O, putative, expressed	gene	ubiquitin-conjugating enzyme E2 O, putative, expressed	chr5	8034044	8039618	+	CDS
3	LOC_Os11g47710	SNF7 domain containing protein, putative, expressed	gene	SNF7 domain containing protein, putative, expressed	chr11	28262627	28265016	-	CDS,three_prime_UTR
3	LOC_Os12g07820	OsAPx6 - Stromal Ascorbate Peroxidase encoding gene 5,8, expressed	gene	OsAPx6 - Stromal Ascorbate Peroxidase encoding gene 5,8, expressed	chr12	3954967	3958804	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g46060	NUC189 domain containing protein, expressed	gene	NUC189 domain containing protein, expressed	chr1	26182839	26189151	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g42140	G-patch domain containing protein, putative, expressed	gene	G-patch domain containing protein, putative, expressed	chr12	26090367	26093235	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g34680	ZOS2-09 - C2H2 zinc finger protein, expressed	gene	ZOS2-09 - C2H2 zinc finger protein, expressed	chr2	20795085	20798606	+	CDS,three_prime_UTR
3	LOC_Os07g40030	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr7	24019383	24024151	+	CDS
3	LOC_Os10g41380	expressed protein	gene	expressed protein	chr10	22172492	22175664	+	CDS,three_prime_UTR
3	LOC_Os04g46700	ABC family transporter: toluene tolerance, putative, expressed	gene	ABC family transporter: toluene tolerance, putative, expressed	chr4	27505724	27509110	+	three_prime_UTR
3	LOC_Os01g39810	Alg9-like mannosyltransferase protein, putative, expressed	gene	Alg9-like mannosyltransferase protein, putative, expressed	chr1	22449453	22455188	+	CDS,three_prime_UTR
3	LOC_Os09g09330	expressed protein	gene	expressed protein	chr9	4991062	4996394	-	three_prime_UTR,promoter
3	LOC_Os09g36180	glycosyl transferase family 8 protein	gene	glycosyl transferase family 8 protein	chr9	20851801	20860490	-	CDS,downstream
3	LOC_Os05g47850	chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed	gene	chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed	chr5	27378116	27383308	-	CDS,three_prime_UTR
3	LOC_Os11g06234	conserved hypothetical protein	gene	conserved hypothetical protein	chr11	2979078	2980873	+	CDS,promoter
3	LOC_Os12g37850	expressed protein	gene	expressed protein	chr12	23222857	23224938	-	CDS,promoter
3	LOC_Os07g04700	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr7	2083107	2090654	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g44710	CAMK_CAMK_like.36 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.36 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr7	26682044	26687833	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g29260	elongation factor protein, putative, expressed	gene	elongation factor protein, putative, expressed	chr3	16652976	16657465	+	CDS,three_prime_UTR
3	LOC_Os03g15890	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr3	8766456	8769486	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g15840	glycosyl transferase, group 1 domain containing protein, expressed	gene	glycosyl transferase, group 1 domain containing protein, expressed	chr3	8736058	8740135	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g15480	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr3	8500302	8504614	+	CDS,three_prime_UTR
3	LOC_Os04g48860	expressed protein	gene	expressed protein	chr4	28964013	28965751	+	three_prime_UTR,downstream
3	LOC_Os08g05660	expressed protein	gene	expressed protein	chr8	3021575	3025788	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g20270	transcriptional regulator Sir2 family protein, putative, expressed	gene	transcriptional regulator Sir2 family protein, putative, expressed	chr4	11306929	11319334	-	CDS
3	LOC_Os02g55460	expressed protein	gene	expressed protein	chr2	33960214	33963689	+	CDS,downstream
3	LOC_Os06g45840	MYB transcription factor, putative, expressed	gene	MYB transcription factor, putative, expressed	chr6	27733724	27739733	-	CDS,three_prime_UTR
3	LOC_Os10g12130	retrotransposon protein, putative, Ty3-gypsy subclass, expressed	gene	retrotransposon protein, putative, Ty3-gypsy subclass, expressed	chr10	6748285	6755721	-	CDS
3	LOC_Os03g49640	STE_MEKK_ste11_MAP3K.14 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	gene	STE_MEKK_ste11_MAP3K.14 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	chr3	28262572	28268763	-	CDS,three_prime_UTR
3	LOC_Os12g18120	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	gene	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	chr12	10433501	10441439	-	CDS,three_prime_UTR
3	LOC_Os05g49230	ribosomal RNA large subunit methyltransferase J, putative, expressed	gene	ribosomal RNA large subunit methyltransferase J, putative, expressed	chr5	28182386	28186934	+	CDS,promoter,downstream
3	LOC_Os01g37837	seryl-tRNA synthetase, putative, expressed	gene	seryl-tRNA synthetase, putative, expressed	chr1	21174699	21178921	+	CDS,three_prime_UTR
3	LOC_Os01g22520	dihydrolipoyl dehydrogenase 1, mitochondrial precursor, putative, expressed	gene	dihydrolipoyl dehydrogenase 1, mitochondrial precursor, putative, expressed	chr1	12653826	12657449	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g20150	phosphoglucan, water dikinase, chloroplast precursor, putative, expressed	gene	phosphoglucan, water dikinase, chloroplast precursor, putative, expressed	chr12	11724731	11741867	-	CDS
3	LOC_Os02g45700	fringe-related protein, putative, expressed	gene	fringe-related protein, putative, expressed	chr2	27797529	27799762	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g53590	expressed protein	gene	expressed protein	chr3	30719800	30726409	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g59570	senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed	gene	senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed	chr1	34444700	34453396	-	CDS
3	LOC_Os06g46670	glutamate receptor, putative, expressed	gene	glutamate receptor, putative, expressed	chr6	28344312	28350246	+	CDS,three_prime_UTR
3	LOC_Os04g52290	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr4	30888266	30891233	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g65310	DUF803 domain containing, putative, expressed	gene	DUF803 domain containing, putative, expressed	chr1	37886562	37889476	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g40290	AAA-type ATPase family protein, putative, expressed	gene	AAA-type ATPase family protein, putative, expressed	chr4	23770328	23774833	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g34420	lysM domain containing protein, putative, expressed	gene	lysM domain containing protein, putative, expressed	chr10	18285892	18288493	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g52400	bacterial transferase hexapeptide domain containing protein, expressed	gene	bacterial transferase hexapeptide domain containing protein, expressed	chr1	30101740	30106316	+	three_prime_UTR,downstream
3	LOC_Os04g06770	argonaute, putative, expressed	gene	argonaute, putative, expressed	chr4	3550822	3558519	-	CDS
3	LOC_Os09g23660	ZIM motif family protein, expressed	gene	ZIM motif family protein, expressed	chr9	14054996	14059319	-	CDS,three_prime_UTR
3	LOC_Os05g02580	expressed protein	gene	expressed protein	chr5	898837	903052	+	three_prime_UTR,downstream
3	LOC_Os07g08000	expressed protein	gene	expressed protein	chr7	4048755	4053524	+	CDS
3	LOC_Os04g20200	hypothetical protein	gene	hypothetical protein	chr4	11248772	11252142	+	CDS,promoter
3	LOC_Os03g52490	nucleic acid binding protein, putative, expressed	gene	nucleic acid binding protein, putative, expressed	chr3	30112612	30116291	-	CDS,three_prime_UTR
3	LOC_Os12g21860	expressed protein	gene	expressed protein	chr12	12303451	12308348	+	CDS,downstream
3	LOC_Os01g48910	AMP-binding enzyme, putative, expressed	gene	AMP-binding enzyme, putative, expressed	chr1	28059366	28066115	-	CDS,three_prime_UTR
3	LOC_Os06g50110	expressed protein	gene	expressed protein	chr6	30351996	30356041	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g08660	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr6	4314694	4318250	-	three_prime_UTR
3	LOC_Os01g07960	acyl-protein thioesterase, putative, expressed	gene	acyl-protein thioesterase, putative, expressed	chr1	3845181	3849245	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g41770	expressed protein	gene	expressed protein	chr10	22406632	22412298	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g02150	tRNA methyltransferase, putative, expressed	gene	tRNA methyltransferase, putative, expressed	chr4	714760	721260	-	CDS,three_prime_UTR
3	LOC_Os03g05040	expressed protein	gene	expressed protein	chr3	2449604	2454272	-	CDS,promoter
3	LOC_Os05g45870	OsFBL25 - F-box domain and LRR containing protein, expressed	gene	OsFBL25 - F-box domain and LRR containing protein, expressed	chr5	26513034	26515804	+	three_prime_UTR,downstream
3	LOC_Os10g36880	kinesin motor domain containing protein, putative, expressed	gene	kinesin motor domain containing protein, putative, expressed	chr10	19685262	19696553	-	CDS,three_prime_UTR
3	LOC_Os12g19030	copine, putative, expressed	gene	copine, putative, expressed	chr12	11043061	11054480	-	CDS
3	LOC_Os06g16430	FHA domain containing protein, putative, expressed	gene	FHA domain containing protein, putative, expressed	chr6	9399936	9407387	+	CDS
3	LOC_Os02g57910	OsFBX73 - F-box domain containing protein, expressed	gene	OsFBX73 - F-box domain containing protein, expressed	chr2	35441726	35444096	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g62620	late embryogenesis abundant protein, putative, expressed	gene	late embryogenesis abundant protein, putative, expressed	chr3	35433844	35436546	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g27460	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr3	15749984	15754753	-	three_prime_UTR,promoter
3	LOC_Os03g53280	WD domain containing protein, putative, expressed	gene	WD domain containing protein, putative, expressed	chr3	30557073	30574933	-	CDS
3	LOC_Os12g03750	Leucine Rich Repeat family protein, expressed	gene	Leucine Rich Repeat family protein, expressed	chr12	1520080	1525548	+	CDS,downstream
3	LOC_Os02g22190	glycosyltransferase, putative, expressed	gene	glycosyltransferase, putative, expressed	chr2	13223107	13227348	-	CDS
3	LOC_Os10g39440	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr10	20976750	20981273	+	CDS,three_prime_UTR
3	LOC_Os05g05710	serine/threonine-protein phosphatase 2A regulatory subunit B subunitgamma, putative, expressed	gene	serine/threonine-protein phosphatase 2A regulatory subunit B subunitgamma, putative, expressed	chr5	2845642	2851635	+	CDS,three_prime_UTR
3	LOC_Os05g34180	hydrolase, NUDIX family, domain containing protein, expressed	gene	hydrolase, NUDIX family, domain containing protein, expressed	chr5	20147794	20151060	+	CDS
3	LOC_Os02g06920	zinc finger, C3HC4 type, domain containing protein, expressed	gene	zinc finger, C3HC4 type, domain containing protein, expressed	chr2	3495206	3500147	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g06910	nucleolar protein family 6, putative, expressed	gene	nucleolar protein family 6, putative, expressed	chr12	3359719	3368243	+	three_prime_UTR,CDS
3	LOC_Os10g39230	tRNA-splicing endonuclease positive effector-related, putative, expressed	gene	tRNA-splicing endonuclease positive effector-related, putative, expressed	chr10	20869241	20876442	-	CDS,promoter
3	LOC_Os02g57050	diphthamide biosynthesis protein, putative, expressed	gene	diphthamide biosynthesis protein, putative, expressed	chr2	34928662	34931108	-	three_prime_UTR,promoter
3	LOC_Os08g40900	auxin response factor, putative, expressed	gene	auxin response factor, putative, expressed	chr8	25867998	25874966	-	CDS,three_prime_UTR
3	LOC_Os03g14120	dihydrodipicolinate reductase, putative, expressed	gene	dihydrodipicolinate reductase, putative, expressed	chr3	7670539	7675792	+	CDS,three_prime_UTR
3	LOC_Os03g52000	BSD domain containing protein, expressed	gene	BSD domain containing protein, expressed	chr3	29831407	29836344	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g57100	endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed	gene	endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed	chr3	32547411	32553042	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g37520	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr8	23753237	23761032	-	CDS,three_prime_UTR
3	LOC_Os12g42600	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	gene	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	chr12	26421349	26427732	+	CDS
3	LOC_Os06g13570	expressed protein	gene	expressed protein	chr6	7487067	7495670	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g02920	cytochrome b561, putative, expressed	gene	cytochrome b561, putative, expressed	chr10	1188789	1190765	-	CDS,downstream
3	LOC_Os08g38890	expressed protein	gene	expressed protein	chr8	24578600	24581004	-	CDS
3	LOC_Os04g52050	TNP1, putative, expressed	gene	TNP1, putative, expressed	chr4	30729098	30734197	-	CDS,three_prime_UTR,downstream
3	LOC_Os07g33200	expressed protein	gene	expressed protein	chr7	19826237	19832202	+	CDS,three_prime_UTR
3	LOC_Os01g08430	expressed protein	gene	expressed protein	chr1	4142351	4149414	+	CDS
3	LOC_Os01g43410	CAMK_CAMK_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr1	24838080	24842574	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g21240	myb-like DNA-binding domain containing protein, expressed	gene	myb-like DNA-binding domain containing protein, expressed	chr3	12124960	12130061	+	CDS
3	LOC_Os07g38950	expressed protein	gene	expressed protein	chr7	23351960	23353788	+	five_prime_UTR,CDS,promoter
3	LOC_Os01g68030	expressed protein	gene	expressed protein	chr1	39548121	39549789	-	three_prime_UTR,promoter,downstream
3	LOC_Os04g42930	OsGrx_C2.2 - glutaredoxin subgroup I, expressed	gene	OsGrx_C2.2 - glutaredoxin subgroup I, expressed	chr4	25211800	25214688	+	CDS,promoter
3	LOC_Os03g19480	SET domain containing protein, expressed	gene	SET domain containing protein, expressed	chr3	10950851	10958553	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os08g10600	UTP--glucose-1-phosphate uridylyltransferase, putative, expressed	gene	UTP--glucose-1-phosphate uridylyltransferase, putative, expressed	chr8	6236454	6241128	+	three_prime_UTR,CDS,downstream
3	LOC_Os07g47201	adenyl cyclase, putative, expressed	gene	adenyl cyclase, putative, expressed	chr7	28214138	28220965	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g35550	expressed protein	gene	expressed protein	chr12	21581383	21584050	+	CDS,three_prime_UTR
3	LOC_Os03g27030	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr3	15473918	15476917	-	three_prime_UTR,promoter,downstream
3	LOC_Os03g59590	ATP/GTP/Ca++ binding protein, putative, expressed	gene	ATP/GTP/Ca++ binding protein, putative, expressed	chr3	33920457	33926735	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g43780	ESP1, putative, expressed	gene	ESP1, putative, expressed	chr5	25391178	25394218	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g57540	60S ribosomal protein L28-1, putative, expressed	gene	60S ribosomal protein L28-1, putative, expressed	chr2	35250270	35252366	-	three_prime_UTR,promoter
3	LOC_Os10g35210	expressed protein	gene	expressed protein	chr10	18736346	18740549	+	CDS
3	LOC_Os02g10430	1-5-phosphoribosyl-5-5-phosphoribosylaminomethylideneaminoimidazole-4-carboxamide isomerase, chloroplast precursor, putative, expressed	gene	1-5-phosphoribosyl-5-5-phosphoribosylaminomethylideneaminoimidazole-4-carboxamide isomerase, chloroplast precursor, putative, expressed	chr2	5478698	5480881	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g30156	starch synthase, putative, expressed	gene	starch synthase, putative, expressed	chr10	15601898	15609894	+	CDS
3	LOC_Os12g09580	leafbladeless1, putative, expressed	gene	leafbladeless1, putative, expressed	chr12	5034184	5039877	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os10g18364	ZOS10-03 - C2H2 zinc finger protein, expressed	gene	ZOS10-03 - C2H2 zinc finger protein, expressed	chr10	9259466	9265363	+	CDS,three_prime_UTR
3	LOC_Os01g67190	ribonuclease T2 family domain containing protein, expressed	gene	ribonuclease T2 family domain containing protein, expressed	chr1	38993426	38996480	-	CDS
3	LOC_Os03g32270	hydrolase, alpha/beta fold family domain containing protein, expressed	gene	hydrolase, alpha/beta fold family domain containing protein, expressed	chr3	18449778	18455094	-	CDS
3	LOC_Os06g04460	hypersensitive-induced response protein, putative, expressed	gene	hypersensitive-induced response protein, putative, expressed	chr6	1908664	1912031	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g42754	expressed protein	gene	expressed protein	chr6	25707680	25709722	+	five_prime_UTR,CDS,promoter,downstream
3	LOC_Os12g14110	expressed protein	gene	expressed protein	chr12	7997903	8001905	-	CDS,three_prime_UTR
3	LOC_Os11g27440	MLA7, putative	gene	MLA7, putative	chr11	15329437	15334090	+	CDS,downstream
3	LOC_Os08g10070	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr8	5839286	5842928	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g45830	expressed protein	gene	expressed protein	chr6	27727480	27732753	-	CDS,downstream
3	LOC_Os05g01010	expressed protein	gene	expressed protein	chr5	33369	36741	+	three_prime_UTR,downstream
3	LOC_Os06g49930	OsFBX207 - F-box domain containing protein, expressed	gene	OsFBX207 - F-box domain containing protein, expressed	chr6	30224220	30230312	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g48602	EMB1011, putative, expressed	gene	EMB1011, putative, expressed	chr7	29095536	29098868	-	CDS,three_prime_UTR
3	LOC_Os04g49220	mitochondrial import inner membrane translocase subunit Tim, putative	gene	mitochondrial import inner membrane translocase subunit Tim, putative	chr4	29163646	29168989	-	CDS
3	LOC_Os03g48090	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr3	27340131	27344269	-	CDS,three_prime_UTR
3	LOC_Os06g14490	calmodulin-binding heat-shock protein, putative, expressed	gene	calmodulin-binding heat-shock protein, putative, expressed	chr6	8141652	8146137	+	CDS
3	LOC_Os01g63230	growth regulator related protein, putative, expressed	gene	growth regulator related protein, putative, expressed	chr1	36642534	36646975	-	CDS,three_prime_UTR
3	LOC_Os06g01640	arginine N-methyltransferase 7, putative, expressed	gene	arginine N-methyltransferase 7, putative, expressed	chr6	374706	381683	+	CDS
3	LOC_Os03g09870	mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	gene	mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	chr3	4908640	4911360	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g15600	PUR ALPHA-1, putative, expressed	gene	PUR ALPHA-1, putative, expressed	chr1	8758370	8762491	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g16470	expressed protein	gene	expressed protein	chr3	9078538	9080480	+	three_prime_UTR
3	LOC_Os09g17750	oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed	gene	oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed	chr9	10848735	10852195	-	CDS,three_prime_UTR
3	LOC_Os02g53420	DnaK family protein, putative, expressed	gene	DnaK family protein, putative, expressed	chr2	32682736	32687175	-	CDS,three_prime_UTR
3	LOC_Os05g27660	expressed protein	gene	expressed protein	chr5	16050290	16054732	+	CDS,three_prime_UTR
3	LOC_Os07g01970	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr7	587674	588510	+	CDS,downstream
3	LOC_Os05g32670	pentatricopeptide repeat-containing protein, putative, expressed	gene	pentatricopeptide repeat-containing protein, putative, expressed	chr5	19061746	19065932	+	CDS,three_prime_UTR,promoter
3	LOC_Os07g39730	ZCW7, putative, expressed	gene	ZCW7, putative, expressed	chr7	23807868	23811512	-	three_prime_UTR,CDS,promoter
3	LOC_Os07g44730	expressed protein	gene	expressed protein	chr7	26699799	26704249	-	CDS,three_prime_UTR
3	LOC_Os12g04370	GRAS family transcription factor containing protein, expressed	gene	GRAS family transcription factor containing protein, expressed	chr12	1852598	1857136	-	CDS,downstream
3	LOC_Os07g10400	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr7	5581401	5586544	+	CDS
3	LOC_Os05g34550	MLO domain containing protein, putative, expressed	gene	MLO domain containing protein, putative, expressed	chr5	20422383	20427654	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g16890	N-acetylglucosaminyltransferase, putative, expressed	gene	N-acetylglucosaminyltransferase, putative, expressed	chr3	9381861	9386375	-	CDS
3	LOC_Os01g25320	auxilin, putative, expressed	gene	auxilin, putative, expressed	chr1	14291041	14302196	-	CDS,three_prime_UTR
3	LOC_Os09g22450	lipase, putative, expressed	gene	lipase, putative, expressed	chr9	13558547	13562070	+	CDS,three_prime_UTR,promoter
3	LOC_Os02g51030	methyltransferase domain containing protein, putative, expressed	gene	methyltransferase domain containing protein, putative, expressed	chr2	31204320	31206791	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g43610	oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed	gene	oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed	chr11	25839217	25841202	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g54860	glutaredoxin, putative, expressed	gene	glutaredoxin, putative, expressed	chr4	32447166	32449710	+	three_prime_UTR,downstream
3	LOC_Os03g09060	prenyltransferase, putative, expressed	gene	prenyltransferase, putative, expressed	chr3	4696227	4699188	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g05730	cell division control protein 48 homolog E, putative, expressed	gene	cell division control protein 48 homolog E, putative, expressed	chr3	2851289	2855678	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g07900	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr5	4266348	4270232	+	CDS,three_prime_UTR
3	LOC_Os02g02560	UTP--glucose-1-phosphate uridylyltransferase, putative, expressed	gene	UTP--glucose-1-phosphate uridylyltransferase, putative, expressed	chr2	926031	929945	-	CDS,downstream
3	LOC_Os06g08400	LIM domain-containing protein, putative, expressed	gene	LIM domain-containing protein, putative, expressed	chr6	4092232	4099937	+	CDS,promoter
3	LOC_Os07g46630	AMP deaminase, putative, expressed	gene	AMP deaminase, putative, expressed	chr7	27864033	27867239	+	CDS,downstream
3	LOC_Os04g33060	NAD dependent epimerase/dehydratase family protein, putative, expressed	gene	NAD dependent epimerase/dehydratase family protein, putative, expressed	chr4	19843786	19847670	+	CDS,three_prime_UTR,promoter
3	LOC_Os12g06560	expressed protein	gene	expressed protein	chr12	3178978	3183800	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g38020	GTPase of unknown function domain containing protein, putative, expressed	gene	GTPase of unknown function domain containing protein, putative, expressed	chr11	22089385	22094921	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g18410	hypothetical protein	gene	hypothetical protein	chr1	10345687	10348848	-	CDS,promoter
3	LOC_Os01g42490	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	gene	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	chr1	24154603	24161528	-	CDS,downstream
3	LOC_Os02g19860	pre-mRNA-splicing factor ATP-dependent RNA helicase, putative, expressed	gene	pre-mRNA-splicing factor ATP-dependent RNA helicase, putative, expressed	chr2	11668274	11673601	+	CDS,promoter
3	LOC_Os03g13130	ternary complex factor MIP1, putative, expressed	gene	ternary complex factor MIP1, putative, expressed	chr3	7087190	7091498	+	CDS
3	LOC_Os10g40020	oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed	gene	oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed	chr10	21363461	21367855	-	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os02g58410	expressed protein	gene	expressed protein	chr2	35712181	35724695	+	CDS,three_prime_UTR
3	LOC_Os12g04220	calcium-transporting ATPase, plasma membrane-type, putative	gene	calcium-transporting ATPase, plasma membrane-type, putative	chr12	1782572	1788562	+	CDS,downstream
3	LOC_Os02g58670	bZIP transcription factor domain containing protein, expressed	gene	bZIP transcription factor domain containing protein, expressed	chr2	35847478	35848862	-	three_prime_UTR,promoter
3	LOC_Os02g51140	N-rich protein, putative, expressed	gene	N-rich protein, putative, expressed	chr2	31284797	31293210	+	CDS,three_prime_UTR
3	LOC_Os07g15270	RNA-binding region RNP-1, putative, expressed	gene	RNA-binding region RNP-1, putative, expressed	chr7	8806278	8810512	+	CDS,downstream
3	LOC_Os02g52220	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr2	31969729	31972353	+	three_prime_UTR,downstream
3	LOC_Os06g04600	Brix domain containing protein, putative, expressed	gene	Brix domain containing protein, putative, expressed	chr6	1999611	2008077	-	CDS,three_prime_UTR
3	LOC_Os02g31070	expressed protein	gene	expressed protein	chr2	18558369	18562703	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g31490	expressed protein	gene	expressed protein	chr3	17938400	17941428	+	CDS,three_prime_UTR
3	LOC_Os02g55770	expressed protein	gene	expressed protein	chr2	34138131	34149733	-	five_prime_UTR
3	LOC_Os04g05080	vacuolar ATP synthase subunit F, putative, expressed	gene	vacuolar ATP synthase subunit F, putative, expressed	chr4	2507086	2510315	+	five_prime_UTR
3	LOC_Os01g50616	phosphatidylinositol transfer, putative, expressed	gene	phosphatidylinositol transfer, putative, expressed	chr1	29065612	29071151	-	CDS,three_prime_UTR,downstream
3	LOC_Os02g31874	DUF803 domain containing, putative, expressed	gene	DUF803 domain containing, putative, expressed	chr2	18821156	18825876	-	CDS,three_prime_UTR
3	LOC_Os09g31466	expressed protein	gene	expressed protein	chr9	18961060	18962967	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g21890	disease resistance protein RPM1, putative, expressed	gene	disease resistance protein RPM1, putative, expressed	chr4	12386832	12389630	+	CDS,downstream
3	LOC_Os05g31230	N-acetyltransferase ESCO1, putative, expressed	gene	N-acetyltransferase ESCO1, putative, expressed	chr5	18100803	18108547	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g74330	pectinacetylesterase domain containing protein, expressed	gene	pectinacetylesterase domain containing protein, expressed	chr1	43065636	43069122	-	CDS
3	LOC_Os06g05530	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr6	2504591	2508041	-	CDS,three_prime_UTR
3	LOC_Os01g52851	expressed protein	gene	expressed protein	chr1	30391695	30394428	+	three_prime_UTR,downstream
3	LOC_Os11g19720	recA protein, putative, expressed	gene	recA protein, putative, expressed	chr11	11356060	11362908	-	CDS,three_prime_UTR
3	LOC_Os04g23600	D-mannose binding lectin family protein	gene	D-mannose binding lectin family protein	chr4	13502415	13505262	-	CDS,promoter
3	LOC_Os05g30720	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr5	17727684	17730748	+	CDS,downstream
3	LOC_Os01g56780	plus-3 domain containing protein, expressed	gene	plus-3 domain containing protein, expressed	chr1	32758080	32763797	-	CDS
3	LOC_Os11g05556	signal recognition particle 54 kDa protein, putative, expressed	gene	signal recognition particle 54 kDa protein, putative, expressed	chr11	2513385	2517849	+	CDS,promoter
3	LOC_Os11g34160	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	gene	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	chr11	19535929	19539372	-	three_prime_UTR,promoter
3	LOC_Os04g39020	aldehyde dehydrogenase, putative, expressed	gene	aldehyde dehydrogenase, putative, expressed	chr4	22986281	22991224	-	CDS
3	LOC_Os02g03430	expressed protein	gene	expressed protein	chr2	1397688	1399034	+	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os09g36770	NTMC2Type1.2 protein, putative, expressed	gene	NTMC2Type1.2 protein, putative, expressed	chr9	21212817	21222868	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g64970	CAMK_CAMK_like.11 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.11 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr1	37709198	37714253	+	CDS,downstream
3	LOC_Os08g20090	expressed protein	gene	expressed protein	chr8	12042347	12044838	+	three_prime_UTR,downstream
3	LOC_Os01g58690	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	gene	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	chr1	33925487	33928770	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g38060	methyltransferase domain containing protein, expressed	gene	methyltransferase domain containing protein, expressed	chr2	22984747	22989519	+	CDS,three_prime_UTR
3	LOC_Os12g41180	LSTK-1-like kinase, putative, expressed	gene	LSTK-1-like kinase, putative, expressed	chr12	25484627	25488836	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g30200	expressed protein	gene	expressed protein	chr11	17092651	17094990	-	CDS,downstream
3	LOC_Os02g05930	phytosulfokine receptor precursor, putative, expressed	gene	phytosulfokine receptor precursor, putative, expressed	chr2	2945291	2949304	-	CDS
3	LOC_Os08g42870	expressed protein	gene	expressed protein	chr8	27100600	27106761	-	CDS
3	LOC_Os02g38804	protein phosphatase 2C containing protein, expressed	gene	protein phosphatase 2C containing protein, expressed	chr2	23449113	23454622	+	CDS,promoter
3	LOC_Os11g32759	expressed protein	gene	expressed protein	chr11	18888464	18891804	-	three_prime_UTR
3	LOC_Os03g63710	GTPase-activating protein, putative, expressed	gene	GTPase-activating protein, putative, expressed	chr3	35968164	35972134	-	CDS,three_prime_UTR
3	LOC_Os08g44150	transmembrane 9 superfamily member, putative	gene	transmembrane 9 superfamily member, putative	chr8	27791617	27794326	+	CDS,promoter
3	LOC_Os10g42790	cytidylyltransferase domain containing protein, expressed	gene	cytidylyltransferase domain containing protein, expressed	chr10	23007917	23010770	-	CDS,promoter
3	LOC_Os02g51700	expressed protein	gene	expressed protein	chr2	31667275	31669421	+	CDS,three_prime_UTR
3	LOC_Os04g54820	programmed cell death 2 C-terminal domain-containing protein, putative, expressed	gene	programmed cell death 2 C-terminal domain-containing protein, putative, expressed	chr4	32415200	32418279	+	CDS,three_prime_UTR
3	LOC_Os04g36859	signal peptidase complex subunit 2, putative, expressed	gene	signal peptidase complex subunit 2, putative, expressed	chr4	22061554	22064598	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g15550	spermidine synthase, putative, expressed	gene	spermidine synthase, putative, expressed	chr2	8726611	8730660	-	three_prime_UTR,CDS
3	LOC_Os01g07382	expressed protein	gene	expressed protein	chr1	3492219	3495598	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g45020	STRUBBELIG-RECEPTOR FAMILY 3 precursor, putative, expressed	gene	STRUBBELIG-RECEPTOR FAMILY 3 precursor, putative, expressed	chr6	27225622	27232109	+	CDS,three_prime_UTR
3	LOC_Os03g24940	proline-rich family protein, putative, expressed	gene	proline-rich family protein, putative, expressed	chr3	14211762	14219372	-	CDS,three_prime_UTR
3	LOC_Os10g42100	pyruvate kinase, putative, expressed	gene	pyruvate kinase, putative, expressed	chr10	22569397	22575266	+	CDS,promoter
3	LOC_Os09g19700	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr9	11788181	11792500	+	CDS,three_prime_UTR
3	LOC_Os01g34690	expressed protein	gene	expressed protein	chr1	19128923	19132838	-	CDS
3	LOC_Os12g42876	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative, expressed	gene	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative, expressed	chr12	26613088	26617173	+	CDS,downstream
3	LOC_Os09g28910	carbonic anhydrase, chloroplast precursor, putative, expressed	gene	carbonic anhydrase, chloroplast precursor, putative, expressed	chr9	17566631	17571391	-	CDS,three_prime_UTR
3	LOC_Os06g10290	OsFBX191 - F-box domain containing protein	gene	OsFBX191 - F-box domain containing protein	chr6	5287462	5292461	+	CDS
3	LOC_Os10g33800	lactate/malate dehydrogenase, putative, expressed	gene	lactate/malate dehydrogenase, putative, expressed	chr10	17842590	17846622	+	CDS,three_prime_UTR
3	LOC_Os05g15160	phosphate/phosphate translocator, putative, expressed	gene	phosphate/phosphate translocator, putative, expressed	chr5	8600384	8609754	+	CDS
3	LOC_Os12g30030	IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed	gene	IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed	chr12	17936172	17939184	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g17290	phosphatidylinositol 3- and 4-kinase family protein, putative, expressed	gene	phosphatidylinositol 3- and 4-kinase family protein, putative, expressed	chr6	10012742	10016980	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g57830	expressed protein	gene	expressed protein	chr2	35415546	35417818	-	three_prime_UTR
3	LOC_Os03g16090	LIM domain-containing protein, putative, expressed	gene	LIM domain-containing protein, putative, expressed	chr3	8869122	8874339	-	CDS,promoter
3	LOC_Os12g05170	expressed protein	gene	expressed protein	chr12	2285727	2286920	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g56230	transmembrane protein 56, putative, expressed	gene	transmembrane protein 56, putative, expressed	chr1	32380166	32384650	-	CDS,three_prime_UTR
3	LOC_Os03g41350	BTBN7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed	gene	BTBN7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed	chr3	22988653	22994959	-	CDS
3	LOC_Os02g32460	ThiF family domain containing protein, putative, expressed	gene	ThiF family domain containing protein, putative, expressed	chr2	19186632	19191259	+	three_prime_UTR
3	LOC_Os11g09280	OsPDIL1-1  protein disulfide isomerase PDIL1-1, expressed	gene	OsPDIL1-1  protein disulfide isomerase PDIL1-1, expressed	chr11	4967059	4970875	-	CDS,three_prime_UTR
3	LOC_Os03g51960	expressed protein	gene	expressed protein	chr3	29791672	29793568	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g05130	myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed	gene	myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed	chr6	2273693	2278530	+	CDS,three_prime_UTR
3	LOC_Os02g07490	glyceraldehyde-3-phosphate dehydrogenase, putative, expressed	gene	glyceraldehyde-3-phosphate dehydrogenase, putative, expressed	chr2	3868110	3872942	+	CDS
3	LOC_Os08g02190	expressed protein	gene	expressed protein	chr8	739821	744515	-	CDS,three_prime_UTR
3	LOC_Os07g42994	hydrolase, putative, expressed	gene	hydrolase, putative, expressed	chr7	25752350	25759625	-	CDS,downstream
3	LOC_Os03g30460	vacuolar protein sorting-associated protein 52, putative, expressed	gene	vacuolar protein sorting-associated protein 52, putative, expressed	chr3	17375291	17385695	-	CDS
3	LOC_Os06g34660	X8 domain containing protein, expressed	gene	X8 domain containing protein, expressed	chr6	20144121	20147102	-	three_prime_UTR,promoter
3	LOC_Os02g09440	expressed protein	gene	expressed protein	chr2	4843090	4847180	-	CDS
3	LOC_Os02g53140	COP1, putative, expressed	gene	COP1, putative, expressed	chr2	32522168	32527714	-	CDS,three_prime_UTR
3	LOC_Os02g40664	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr2	24639629	24645335	-	CDS,three_prime_UTR
3	LOC_Os11g12020	disease resistance protein, putative	gene	disease resistance protein, putative	chr11	6686038	6686434	+	CDS,promoter,downstream
3	LOC_Os01g72650	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr1	42148666	42155808	+	five_prime_UTR,CDS
3	LOC_Os01g51800	expressed protein	gene	expressed protein	chr1	29782502	29784913	-	three_prime_UTR,promoter
3	LOC_Os03g57090	arv1, putative, expressed	gene	arv1, putative, expressed	chr3	32543769	32547211	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g39300	conserved hypothetical protein	gene	conserved hypothetical protein	chr11	22932731	22935416	+	CDS,downstream
3	LOC_Os05g43790	DUF803 domain containing, putative, expressed	gene	DUF803 domain containing, putative, expressed	chr5	25396024	25399564	+	three_prime_UTR,CDS,promoter,downstream
3	LOC_Os07g44040	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr7	26320213	26323260	+	three_prime_UTR,downstream
3	LOC_Os06g10810	phosphate carrier protein, mitochondrial precursor, putative, expressed	gene	phosphate carrier protein, mitochondrial precursor, putative, expressed	chr6	5637273	5640661	+	CDS,three_prime_UTR
3	LOC_Os10g25300	expressed protein	gene	expressed protein	chr10	13009483	13012642	-	three_prime_UTR
3	LOC_Os10g05200	OsFBX367 - F-box domain containing protein, expressed	gene	OsFBX367 - F-box domain containing protein, expressed	chr10	2548359	2550478	+	three_prime_UTR,downstream
3	LOC_Os09g08670	protein of unknown function DUF1296 domain containing protein, expressed	gene	protein of unknown function DUF1296 domain containing protein, expressed	chr9	4553651	4567812	+	CDS
3	LOC_Os03g32590	transcription initiation factor, putative, expressed	gene	transcription initiation factor, putative, expressed	chr3	18637302	18646389	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g25864	expressed protein	gene	expressed protein	chr8	15752746	15755813	-	three_prime_UTR
3	LOC_Os09g30418	heat shock protein, putative	gene	heat shock protein, putative	chr9	18523286	18528649	-	CDS
3	LOC_Os01g08110	flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed	gene	flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed	chr1	3923363	3925556	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g45980	toprim domain-containing protein, putative, expressed	gene	toprim domain-containing protein, putative, expressed	chr6	27865743	27873408	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g58580	ICE-like protease p20 domain containing protein, putative, expressed	gene	ICE-like protease p20 domain containing protein, putative, expressed	chr1	33868098	33870796	+	CDS,three_prime_UTR
3	LOC_Os07g49510	expressed protein	gene	expressed protein	chr7	29652146	29655388	+	CDS
3	LOC_Os06g40850	IQ calmodulin-binding motif family protein, putative, expressed	gene	IQ calmodulin-binding motif family protein, putative, expressed	chr6	24362119	24365498	-	three_prime_UTR,promoter
3	LOC_Os01g67250	Rad21 / Rec8 like protein, putative, expressed	gene	Rad21 / Rec8 like protein, putative, expressed	chr1	39024052	39034007	-	CDS,three_prime_UTR
3	LOC_Os11g47400	hypothetical protein	gene	hypothetical protein	chr11	27992385	27993624	+	CDS,promoter
3	LOC_Os03g12450	nucleoporin, putative, expressed	gene	nucleoporin, putative, expressed	chr3	6572198	6579719	+	CDS,three_prime_UTR
3	LOC_Os10g35130	expressed protein	gene	expressed protein	chr10	18675822	18678846	+	CDS,three_prime_UTR
3	LOC_Os10g21910	acetyl-CoA carboxylase, putative, expressed	gene	acetyl-CoA carboxylase, putative, expressed	chr10	11202713	11213820	+	five_prime_UTR,CDS
3	LOC_Os11g08670	NAD kinase, putative, expressed	gene	NAD kinase, putative, expressed	chr11	4620972	4627154	+	CDS
3	LOC_Os12g38920	heparanase-like protein precursor, putative, expressed	gene	heparanase-like protein precursor, putative, expressed	chr12	23897768	23902181	+	CDS,downstream
3	LOC_Os07g02760	OsFBD13 - F-box and FBD domain containing protein, expressed	gene	OsFBD13 - F-box and FBD domain containing protein, expressed	chr7	1005786	1009139	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g43750	kinase, pfkB family, putative, expressed	gene	kinase, pfkB family, putative, expressed	chr4	25712972	25717240	-	CDS
3	LOC_Os04g22360	DUF647 domain containing protein, putative, expressed	gene	DUF647 domain containing protein, putative, expressed	chr4	12636530	12642451	+	CDS,three_prime_UTR
3	LOC_Os02g04520	AGG2, putative, expressed	gene	AGG2, putative, expressed	chr2	2007232	2009965	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g52540	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr4	31054075	31058323	+	CDS
3	LOC_Os03g44610	IQ calmodulin-binding motif domain containing protein, expressed	gene	IQ calmodulin-binding motif domain containing protein, expressed	chr3	25114235	25122340	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g10710	expressed protein	gene	expressed protein	chr6	5587197	5593758	+	three_prime_UTR,downstream
3	LOC_Os03g04830	expressed protein	gene	expressed protein	chr3	2294315	2298837	+	CDS
3	LOC_Os12g35950	transposon protein, putative, CACTA, En/Spm sub-class	gene	transposon protein, putative, CACTA, En/Spm sub-class	chr12	21939568	21942444	+	CDS
3	LOC_Os02g36990	dynein light chain type 1 family protein, putative, expressed	gene	dynein light chain type 1 family protein, putative, expressed	chr2	22333669	22337635	-	three_prime_UTR,promoter
3	LOC_Os03g18570	40S ribosomal protein S7, putative, expressed	gene	40S ribosomal protein S7, putative, expressed	chr3	10392570	10394745	+	three_prime_UTR,downstream
3	LOC_Os03g51710	homeobox protein knotted-1, putative, expressed	gene	homeobox protein knotted-1, putative, expressed	chr3	29619330	29625789	-	three_prime_UTR,promoter
3	LOC_Os01g59660	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr1	34507321	34511738	+	three_prime_UTR,CDS,downstream
3	LOC_Os05g06430	OsPDIL2-1  protein disulfide isomerase PDIL2-1, expressed	gene	OsPDIL2-1  protein disulfide isomerase PDIL2-1, expressed	chr5	3294672	3298031	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g17430	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr12	9992415	9993859	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g46890	pre-mRNA-processing factor 31, putative, expressed	gene	pre-mRNA-processing factor 31, putative, expressed	chr4	27606661	27611264	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g16255	transmembrane protein 167 precursor, putative, expressed	gene	transmembrane protein 167 precursor, putative, expressed	chr5	9194955	9198243	+	CDS,three_prime_UTR
3	LOC_Os07g36800	UPF0041 domain containing protein, putative, expressed	gene	UPF0041 domain containing protein, putative, expressed	chr7	22045001	22047323	+	CDS
3	LOC_Os02g47800	monodehydroascorbate reductase, putative, expressed	gene	monodehydroascorbate reductase, putative, expressed	chr2	29224095	29228326	-	CDS,three_prime_UTR
3	LOC_Os01g37825	M16 domain containing zinc peptidase, putative, expressed	gene	M16 domain containing zinc peptidase, putative, expressed	chr1	21158027	21166532	+	CDS,three_prime_UTR
3	LOC_Os04g56800	peptidyl-prolyl cis-trans isomerase, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, putative, expressed	chr4	33688349	33691006	-	CDS,promoter
3	LOC_Os01g23620	miro, putative, expressed	gene	miro, putative, expressed	chr1	13285077	13287440	+	three_prime_UTR
3	LOC_Os10g41790	type II intron maturase protein, putative, expressed	gene	type II intron maturase protein, putative, expressed	chr10	22417727	22420701	+	three_prime_UTR,downstream
3	LOC_Os02g09100	isoleucyl-tRNA synthetase, cytoplasmic, putative, expressed	gene	isoleucyl-tRNA synthetase, cytoplasmic, putative, expressed	chr2	4658133	4668899	-	CDS
3	LOC_Os04g56970	tubulin/FtsZ domain containing protein, putative, expressed	gene	tubulin/FtsZ domain containing protein, putative, expressed	chr4	33778560	33781641	-	CDS,three_prime_UTR
3	LOC_Os01g70200	exostosin family domain containing protein, expressed	gene	exostosin family domain containing protein, expressed	chr1	40632047	40635069	-	CDS
3	LOC_Os06g05380	OsWRKY73 - Superfamily of TFs having WRKY and zinc finger domains, expressed	gene	OsWRKY73 - Superfamily of TFs having WRKY and zinc finger domains, expressed	chr6	2428150	2432255	+	CDS,downstream
3	LOC_Os01g61190	exo70 exocyst complex subunit, putative, expressed	gene	exo70 exocyst complex subunit, putative, expressed	chr1	35411887	35416541	+	CDS,promoter
3	LOC_Os02g37470	tetratricopeptide repeat containing protein, putative, expressed	gene	tetratricopeptide repeat containing protein, putative, expressed	chr2	22611634	22614236	+	CDS,three_prime_UTR
3	LOC_Os06g02580	high-affinity nickel-transport family protein, putative, expressed	gene	high-affinity nickel-transport family protein, putative, expressed	chr6	907486	909323	-	three_prime_UTR,promoter
3	LOC_Os08g21350	cig3, putative, expressed	gene	cig3, putative, expressed	chr8	12722126	12730478	-	three_prime_UTR
3	LOC_Os01g01312	retrotransposon protein, putative, Ty1-copia subclass, expressed	gene	retrotransposon protein, putative, Ty1-copia subclass, expressed	chr1	150409	155500	+	CDS
3	LOC_Os01g62860	oxidoreductase, aldo/keto reductase family protein, putative, expressed	gene	oxidoreductase, aldo/keto reductase family protein, putative, expressed	chr1	36402399	36406337	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g39670	seryl-tRNA synthetase, putative, expressed	gene	seryl-tRNA synthetase, putative, expressed	chr11	23162052	23166458	+	CDS,three_prime_UTR
3	LOC_Os02g57780	expressed protein	gene	expressed protein	chr2	35373509	35379278	+	CDS,three_prime_UTR
3	LOC_Os02g22260	fruit protein PKIWI502, putative, expressed	gene	fruit protein PKIWI502, putative, expressed	chr2	13280845	13292529	+	three_prime_UTR
3	LOC_Os01g19480	kelch motif family protein, putative, expressed	gene	kelch motif family protein, putative, expressed	chr1	11057854	11062954	+	CDS,downstream
3	LOC_Os04g47290	amine oxidase, putative, expressed	gene	amine oxidase, putative, expressed	chr4	27890423	27896106	+	three_prime_UTR
3	LOC_Os11g04480	peflin, putative, expressed	gene	peflin, putative, expressed	chr11	1867962	1871288	-	CDS
3	LOC_Os03g50470	expressed protein	gene	expressed protein	chr3	28797898	28803350	-	three_prime_UTR
3	LOC_Os01g46020	TATA-binding protein-associated factor TAFII55 family protein, putative, expressed	gene	TATA-binding protein-associated factor TAFII55 family protein, putative, expressed	chr1	26162742	26165428	+	three_prime_UTR,CDS
3	LOC_Os02g37590	glycerophosphoryl diester phosphodiesterase family protein, putative, expressed	gene	glycerophosphoryl diester phosphodiesterase family protein, putative, expressed	chr2	22681409	22686411	+	CDS
3	LOC_Os09g30120	CSLE1 - cellulose synthase-like family E, expressed	gene	CSLE1 - cellulose synthase-like family E, expressed	chr9	18306886	18313233	-	CDS,five_prime_UTR
3	LOC_Os03g11890	potyvirus VPg interacting protein, putative, expressed	gene	potyvirus VPg interacting protein, putative, expressed	chr3	6226228	6231509	+	CDS,downstream
3	LOC_Os06g45100	FAD binding domain of DNA photolyase domain containing protein, expressed	gene	FAD binding domain of DNA photolyase domain containing protein, expressed	chr6	27274442	27277875	-	CDS,promoter,downstream
3	LOC_Os05g47980	ATP synthase, putative, expressed	gene	ATP synthase, putative, expressed	chr5	27447070	27450697	-	CDS,three_prime_UTR
3	LOC_Os02g12650	puromycin-sensitive aminopeptidase, putative, expressed	gene	puromycin-sensitive aminopeptidase, putative, expressed	chr2	6599222	6606542	+	CDS,three_prime_UTR
3	LOC_Os04g33050	HIRAN domain containing protein, putative, expressed	gene	HIRAN domain containing protein, putative, expressed	chr4	19837949	19843565	+	CDS,promoter
3	LOC_Os03g19190	TOPBP1C - Similar to DNA replication protein TOPBP1 from, expressed	gene	TOPBP1C - Similar to DNA replication protein TOPBP1 from, expressed	chr3	10751510	10758847	+	CDS
3	LOC_Os04g32970	OTU-like cysteine protease family protein, putative, expressed	gene	OTU-like cysteine protease family protein, putative, expressed	chr4	19761144	19765602	+	CDS,three_prime_UTR
3	LOC_Os05g42010	TraB family protein, putative, expressed	gene	TraB family protein, putative, expressed	chr5	24525744	24530679	-	CDS
3	LOC_Os03g27280	CAMK_CAMK_like.19 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.19 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr3	15626747	15631112	-	CDS,three_prime_UTR
3	LOC_Os08g03880	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr8	1847416	1852019	+	three_prime_UTR,promoter,downstream
3	LOC_Os12g33020	mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	gene	mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	chr12	19919558	19924688	+	CDS,three_prime_UTR
3	LOC_Os11g26594	expressed protein	gene	expressed protein	chr11	14772980	14775604	+	three_prime_UTR
3	LOC_Os02g44930	HMG1/2, putative, expressed	gene	HMG1/2, putative, expressed	chr2	27219406	27221344	+	three_prime_UTR,downstream
3	LOC_Os12g36400	transposon protein, putative, Pong sub-class	gene	transposon protein, putative, Pong sub-class	chr12	22250455	22251327	+	CDS,promoter
3	LOC_Os03g56950	phytochrome-interacting factor 4, putative, expressed	gene	phytochrome-interacting factor 4, putative, expressed	chr3	32425328	32428717	+	CDS,three_prime_UTR
3	LOC_Os01g51380	ATP synthase, putative, expressed	gene	ATP synthase, putative, expressed	chr1	29535638	29541364	+	CDS
3	LOC_Os04g39814	Os4bglu9 - beta-glucosidase homologue, similar to Os4Bglu12 exoglucanase/beta-glucosidase, expressed	gene	Os4bglu9 - beta-glucosidase homologue, similar to Os4Bglu12 exoglucanase/beta-glucosidase, expressed	chr4	23530300	23536588	-	three_prime_UTR,CDS
3	LOC_Os06g07350	RNA-binding motif protein, putative, expressed	gene	RNA-binding motif protein, putative, expressed	chr6	3535683	3539239	-	CDS,three_prime_UTR
3	LOC_Os04g59450	CAMK_CAMK_like.28 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.28 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr4	35159194	35161130	+	three_prime_UTR,downstream
3	LOC_Os12g18200	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	gene	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	chr12	10504246	10513219	-	CDS
3	LOC_Os01g45840	CRR2, putative, expressed	gene	CRR2, putative, expressed	chr1	26035598	26038114	+	three_prime_UTR,downstream
3	LOC_Os11g38170	notchless protein, putative, expressed	gene	notchless protein, putative, expressed	chr11	22164846	22171675	+	CDS,three_prime_UTR
3	LOC_Os09g20010	SNF1-related protein kinase regulatory subunit beta-2, putative, expressed	gene	SNF1-related protein kinase regulatory subunit beta-2, putative, expressed	chr9	11984970	11988562	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os01g13550	beta-amylase, putative, expressed	gene	beta-amylase, putative, expressed	chr1	7577091	7581923	-	CDS,promoter
3	LOC_Os07g30120	expressed protein	gene	expressed protein	chr7	17771001	17775691	+	three_prime_UTR,promoter
3	LOC_Os01g46950	aldose 1-epimerase, putative, expressed	gene	aldose 1-epimerase, putative, expressed	chr1	26790710	26794895	-	CDS
3	LOC_Os04g49990	AT hook motif domain containing protein, expressed	gene	AT hook motif domain containing protein, expressed	chr4	29628904	29633019	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g57650	No apical meristem protein, putative, expressed	gene	No apical meristem protein, putative, expressed	chr2	35297324	35301411	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g07420	splicing factor, arginine/serine-rich 12, putative, expressed	gene	splicing factor, arginine/serine-rich 12, putative, expressed	chr2	3830478	3832332	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g27720	E3 ubiquitin-protein ligase MGRN1, putative, expressed	gene	E3 ubiquitin-protein ligase MGRN1, putative, expressed	chr1	15452594	15456787	+	CDS
3	LOC_Os10g05540	OsFBX373 - F-box domain containing protein, expressed	gene	OsFBX373 - F-box domain containing protein, expressed	chr10	2742337	2747379	-	CDS,three_prime_UTR
3	LOC_Os03g16130	CAMK_CAMK_like_ULKh_APGy.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like_ULKh_APGy.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr3	8895124	8900917	-	CDS,three_prime_UTR,five_prime_UTR,downstream
3	LOC_Os05g04170	AMP-binding enzyme, putative, expressed	gene	AMP-binding enzyme, putative, expressed	chr5	1866860	1873305	-	CDS,promoter
3	LOC_Os08g37904	ZOS8-08 - C2H2 zinc finger protein, expressed	gene	ZOS8-08 - C2H2 zinc finger protein, expressed	chr8	24000153	24008404	+	three_prime_UTR,CDS
3	LOC_Os01g37040	retrotransposon protein, putative, Ty1-copia subclass, expressed	gene	retrotransposon protein, putative, Ty1-copia subclass, expressed	chr1	20661945	20664019	+	CDS,three_prime_UTR
3	LOC_Os04g04030	expressed protein	gene	expressed protein	chr4	1861915	1865693	+	CDS,promoter
3	LOC_Os03g52460	glucose-1-phosphate adenylyltransferase large subunit, putative, expressed	gene	glucose-1-phosphate adenylyltransferase large subunit, putative, expressed	chr3	30092408	30097635	-	CDS
3	LOC_Os06g29180	erythronate-4-phosphate dehydrogenase domain containing protein, expressed	gene	erythronate-4-phosphate dehydrogenase domain containing protein, expressed	chr6	16648546	16652298	+	CDS
3	LOC_Os04g45470	vacuolar-processing enzyme precursor, putative, expressed	gene	vacuolar-processing enzyme precursor, putative, expressed	chr4	26718739	26723552	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g14400	1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed	gene	1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed	chr6	8037364	8040832	-	CDS
3	LOC_Os03g14800	serine palmitoyltransferase 1, putative, expressed	gene	serine palmitoyltransferase 1, putative, expressed	chr3	8045899	8051505	-	CDS,three_prime_UTR
3	LOC_Os04g22950	hypothetical protein	gene	hypothetical protein	chr4	13018010	13019095	-	CDS,downstream
3	LOC_Os05g50800	expressed protein	gene	expressed protein	chr5	29074818	29077750	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g03670	Mpv17 / PMP22 family domain containing protein, expressed	gene	Mpv17 / PMP22 family domain containing protein, expressed	chr11	1428207	1431728	-	CDS
3	LOC_Os02g53500	RFC5 - Putative clamp loader of PCNA, replication factor C subunit 5, expressed	gene	RFC5 - Putative clamp loader of PCNA, replication factor C subunit 5, expressed	chr2	32717071	32721689	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g07730	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr5	4161029	4164758	-	CDS,three_prime_UTR
3	LOC_Os01g05710	expressed protein	gene	expressed protein	chr1	2721518	2723797	+	CDS,promoter
3	LOC_Os04g58180	WD-40 repeat family protein, putative, expressed	gene	WD-40 repeat family protein, putative, expressed	chr4	34464430	34470106	+	CDS
3	LOC_Os07g18944	expressed protein	gene	expressed protein	chr7	11221039	11224294	-	three_prime_UTR,promoter
3	LOC_Os08g02950	expressed protein	gene	expressed protein	chr8	1282080	1285548	-	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os02g07410	glycine cleavage system H protein, putative, expressed	gene	glycine cleavage system H protein, putative, expressed	chr2	3827671	3830181	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g33550	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr7	20044853	20048078	+	CDS,promoter
3	LOC_Os06g11910	expressed protein	gene	expressed protein	chr6	6343014	6346677	-	CDS,three_prime_UTR
3	LOC_Os04g46190	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	gene	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	chr4	27173063	27176097	+	CDS,promoter
3	LOC_Os02g24330	eukaryotic translation initiation factor 4B, putative, expressed	gene	eukaryotic translation initiation factor 4B, putative, expressed	chr2	14109885	14113516	+	CDS,three_prime_UTR
3	LOC_Os07g30980	uvrD/REP helicase family protein, putative, expressed	gene	uvrD/REP helicase family protein, putative, expressed	chr7	18337209	18350643	-	CDS
3	LOC_Os11g34190	expressed protein	gene	expressed protein	chr11	19552183	19558871	+	CDS,three_prime_UTR
3	LOC_Os12g18650	Regulator of chromosome condensation domain containing protein, expressed	gene	Regulator of chromosome condensation domain containing protein, expressed	chr12	10768321	10772796	+	CDS,three_prime_UTR,promoter
3	LOC_Os10g34580	FHA domain containing protein, putative, expressed	gene	FHA domain containing protein, putative, expressed	chr10	18362940	18366832	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g01640	Rer1 protein, putative, expressed	gene	Rer1 protein, putative, expressed	chr1	318713	321248	+	CDS,three_prime_UTR
3	LOC_Os01g16550	expressed protein	gene	expressed protein	chr1	9393337	9395436	-	CDS
3	LOC_Os01g53620	expressed protein	gene	expressed protein	chr1	30785059	30786980	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g06510	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr8	3685057	3687012	-	three_prime_UTR,promoter
3	LOC_Os06g50930	rhodanese-like domain containing protein, putative, expressed	gene	rhodanese-like domain containing protein, putative, expressed	chr6	30822394	30825116	-	three_prime_UTR,promoter
3	LOC_Os10g22869	expressed protein	gene	expressed protein	chr10	11807459	11814299	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os01g58680	apurinic endonuclease-redox protein, putative, expressed	gene	apurinic endonuclease-redox protein, putative, expressed	chr1	33918349	33923620	+	CDS
3	LOC_Os08g34750	serine esterase family protein, putative, expressed	gene	serine esterase family protein, putative, expressed	chr8	21839407	21844233	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g10190	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr12	5386776	5390694	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g04830	expressed protein	gene	expressed protein	chr8	2426448	2430185	-	three_prime_UTR
3	LOC_Os01g64370	expressed protein	gene	expressed protein	chr1	37359211	37362393	-	CDS,three_prime_UTR
3	LOC_Os03g01990	lysM domain containing protein, putative, expressed	gene	lysM domain containing protein, putative, expressed	chr3	620020	623072	+	CDS,three_prime_UTR
3	LOC_Os04g29424	retrotransposon protein, putative, LINE subclass	gene	retrotransposon protein, putative, LINE subclass	chr4	17319841	17324253	-	CDS,promoter
3	LOC_Os12g03460	mitochondrial import inner membrane translocase subunit Tim, putative	gene	mitochondrial import inner membrane translocase subunit Tim, putative	chr12	1350471	1355940	-	CDS
3	LOC_Os04g38420	oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed	gene	oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed	chr4	22652738	22655412	-	CDS,downstream
3	LOC_Os02g02120	OsWAK11 - OsWAK receptor-like protein kinase	gene	OsWAK11 - OsWAK receptor-like protein kinase	chr2	627342	630655	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g51010	hydrolase, alpha/beta fold family domain containing protein, expressed	gene	hydrolase, alpha/beta fold family domain containing protein, expressed	chr3	29143172	29146739	-	CDS
3	LOC_Os10g38630	glutathione S-transferase, putative, expressed	gene	glutathione S-transferase, putative, expressed	chr10	20528351	20530413	+	CDS,three_prime_UTR
3	LOC_Os03g05330	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr3	2592125	2604498	+	CDS
3	LOC_Os10g40030	short chain dehydrogenase/reductase protein, putative, expressed	gene	short chain dehydrogenase/reductase protein, putative, expressed	chr10	21368744	21372124	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g11370	verticillium wilt disease resistance protein, putative, expressed	gene	verticillium wilt disease resistance protein, putative, expressed	chr12	6137461	6141049	-	CDS,three_prime_UTR
3	LOC_Os02g50550	dynamin, putative, expressed	gene	dynamin, putative, expressed	chr2	30855622	30865302	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g36460	zinc RING finger protein, putative, expressed	gene	zinc RING finger protein, putative, expressed	chr9	21037633	21041162	+	CDS
3	LOC_Os05g23620	cytochrome c1-1, heme protein, mitochondrial precursor, putative, expressed	gene	cytochrome c1-1, heme protein, mitochondrial precursor, putative, expressed	chr5	13485529	13490084	-	CDS,three_prime_UTR
3	LOC_Os04g55290	G10 protein, putative, expressed	gene	G10 protein, putative, expressed	chr4	32683002	32686508	-	CDS,three_prime_UTR
3	LOC_Os01g53640	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr1	30817898	30822203	+	CDS,three_prime_UTR
3	LOC_Os02g09430	exostosin family domain containing protein, expressed	gene	exostosin family domain containing protein, expressed	chr2	4838489	4841902	-	CDS,three_prime_UTR,downstream
3	LOC_Os08g08860	CRS2-associated factor 2, mitochondrial precursor, putative, expressed	gene	CRS2-associated factor 2, mitochondrial precursor, putative, expressed	chr8	5145987	5149355	-	CDS,three_prime_UTR
3	LOC_Os02g43480	expressed protein	gene	expressed protein	chr2	26237795	26240371	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g03340	RNA polymerase II transcription factor B subunit 4, putative, expressed	gene	RNA polymerase II transcription factor B subunit 4, putative, expressed	chr2	1347132	1351335	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g12129	expressed protein	gene	expressed protein	chr6	6488415	6490712	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g19990	GPI-anchored protein, putative, expressed	gene	GPI-anchored protein, putative, expressed	chr6	11460524	11463903	+	CDS,three_prime_UTR,promoter
3	LOC_Os02g55950	ATMAK10, putative, expressed	gene	ATMAK10, putative, expressed	chr2	34236941	34245182	+	CDS,three_prime_UTR,promoter
3	LOC_Os08g41990	aminotransferase, putative, expressed	gene	aminotransferase, putative, expressed	chr8	26528677	26531360	-	CDS,three_prime_UTR,downstream
3	LOC_Os05g01120	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr5	101365	104149	-	CDS
3	LOC_Os01g04160	expressed protein	gene	expressed protein	chr1	1833110	1836733	+	CDS
3	LOC_Os02g10600	OsFBA1 - F-box and FBA domain containing protein, expressed	gene	OsFBA1 - F-box and FBA domain containing protein, expressed	chr2	5573182	5578016	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os07g41740	PHD finger protein, putative, expressed	gene	PHD finger protein, putative, expressed	chr7	25012512	25016820	+	CDS,promoter,downstream
3	LOC_Os06g08080	inorganic H+ pyrophosphatase, putative, expressed	gene	inorganic H+ pyrophosphatase, putative, expressed	chr6	3918502	3923410	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g11720	expressed protein	gene	expressed protein	chr8	6865439	6870590	-	CDS,three_prime_UTR
3	LOC_Os01g38480	GA18326-PA, putative, expressed	gene	GA18326-PA, putative, expressed	chr1	21622530	21625722	-	CDS,three_prime_UTR
3	LOC_Os02g53330	1-aminocyclopropane-1-carboxylate deaminase, putative, expressed	gene	1-aminocyclopropane-1-carboxylate deaminase, putative, expressed	chr2	32637483	32642635	-	CDS,three_prime_UTR
3	LOC_Os06g09450	sucrose synthase, putative, expressed	gene	sucrose synthase, putative, expressed	chr6	4795287	4803247	-	CDS,three_prime_UTR
3	LOC_Os10g25770	transcription initiation factor IIE subunit beta, putative, expressed	gene	transcription initiation factor IIE subunit beta, putative, expressed	chr10	13281766	13286147	-	CDS
3	LOC_Os01g72980	tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA, putative, expressed	gene	tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA, putative, expressed	chr1	42328202	42334710	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g38830	hydrolase, alpha/beta fold family domain containing protein, expressed	gene	hydrolase, alpha/beta fold family domain containing protein, expressed	chr7	23292338	23295811	+	CDS
3	LOC_Os03g29960	DEK C terminal domain containing protein, expressed	gene	DEK C terminal domain containing protein, expressed	chr3	17076668	17082854	+	CDS
3	LOC_Os02g47970	calpain, putative, expressed	gene	calpain, putative, expressed	chr2	29335385	29352022	+	CDS,three_prime_UTR
3	LOC_Os01g46932	vacuolar protein-sorting-associated protein 25, putative, expressed	gene	vacuolar protein-sorting-associated protein 25, putative, expressed	chr1	26784143	26787621	-	CDS,three_prime_UTR
3	LOC_Os09g31486	DnaK family protein, putative, expressed	gene	DnaK family protein, putative, expressed	chr9	18986942	18990156	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g07570	ferredoxin-thioredoxin reductase catalytic chain, chloroplast precursor, putative, expressed	gene	ferredoxin-thioredoxin reductase catalytic chain, chloroplast precursor, putative, expressed	chr9	3791262	3795371	+	CDS,three_prime_UTR
3	LOC_Os03g13790	myb/SANT domain protein, putative, expressed	gene	myb/SANT domain protein, putative, expressed	chr3	7468554	7474507	+	CDS,three_prime_UTR
3	LOC_Os02g03040	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr2	1193366	1197056	-	CDS,three_prime_UTR,five_prime_UTR,downstream
3	LOC_Os12g32620	OsWLIM1 - LIM domain protein, putative actin-binding protein and transcription factor, expressed	gene	OsWLIM1 - LIM domain protein, putative actin-binding protein and transcription factor, expressed	chr12	19651498	19653558	+	CDS,three_prime_UTR
3	LOC_Os12g03690	D-mannose binding lectin family protein	gene	D-mannose binding lectin family protein	chr12	1490359	1492845	-	CDS,downstream
3	LOC_Os10g30580	cell division control protein 48 homolog E, putative, expressed	gene	cell division control protein 48 homolog E, putative, expressed	chr10	15840174	15844740	+	CDS
3	LOC_Os05g40300	expressed protein	gene	expressed protein	chr5	23623138	23625714	+	three_prime_UTR
3	LOC_Os09g39490	histone-like transcription factor and archaeal histone, putative, expressed	gene	histone-like transcription factor and archaeal histone, putative, expressed	chr9	22689696	22691494	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g55590	expressed protein	gene	expressed protein	chr2	34035611	34040395	+	CDS
3	LOC_Os01g66350	DUF647 domain containing protein, putative, expressed	gene	DUF647 domain containing protein, putative, expressed	chr1	38533780	38539327	+	CDS,three_prime_UTR
3	LOC_Os02g31899	unknown	gene	unknown	chr2	18837161	18837769	+	CDS,promoter,downstream
3	LOC_Os03g22670	triacylglycerol Lipase, putative, expressed	gene	triacylglycerol Lipase, putative, expressed	chr3	13086115	13092520	-	CDS,three_prime_UTR
3	LOC_Os01g47550	kinase, pfkB family, putative, expressed	gene	kinase, pfkB family, putative, expressed	chr1	27184589	27190212	+	CDS
3	LOC_Os07g47340	expressed protein	gene	expressed protein	chr7	28307431	28310589	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os10g12354	endonuclease, putative, expressed	gene	endonuclease, putative, expressed	chr10	6884109	6893929	+	CDS,three_prime_UTR
3	LOC_Os04g52830	OsFBK15 - F-box domain and kelch repeat containing protein, expressed	gene	OsFBK15 - F-box domain and kelch repeat containing protein, expressed	chr4	31273842	31276977	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g38960	DNA-directed RNA polymerase subunit, putative, expressed	gene	DNA-directed RNA polymerase subunit, putative, expressed	chr3	21635800	21639743	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g43940	expressed protein	gene	expressed protein	chr6	26470722	26472970	-	five_prime_UTR,downstream
3	LOC_Os06g19660	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr6	11218922	11227577	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g08370	symbiosis-related disease resistance protein, putative, expressed	gene	symbiosis-related disease resistance protein, putative, expressed	chr1	4105828	4107541	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g06080	FAD dependent oxidoreductase domain containing protein, expressed	gene	FAD dependent oxidoreductase domain containing protein, expressed	chr7	2944228	2946296	+	three_prime_UTR,downstream
3	LOC_Os05g45900	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	gene	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	chr5	26533504	26538632	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g30060	prefoldin subunit, putative, expressed	gene	prefoldin subunit, putative, expressed	chr12	17973595	17976524	+	five_prime_UTR,CDS
3	LOC_Os05g02740	expressed protein	gene	expressed protein	chr5	986254	988504	+	CDS,three_prime_UTR
3	LOC_Os07g31260	expressed protein	gene	expressed protein	chr7	18503632	18506158	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g29780	ATROPGEF7/ROPGEF7, putative, expressed	gene	ATROPGEF7/ROPGEF7, putative, expressed	chr7	17504863	17507823	-	five_prime_UTR,CDS
3	LOC_Os02g38050	joka2, putative, expressed	gene	joka2, putative, expressed	chr2	22975964	22981727	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g42010	DNA-directed polymerase, putative, expressed	gene	DNA-directed polymerase, putative, expressed	chr3	23333152	23339088	+	CDS
3	LOC_Os01g72210	early-responsive to dehydration protein-related, putative, expressed	gene	early-responsive to dehydration protein-related, putative, expressed	chr1	41868887	41873513	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g45080	anthocyanidin 5,3-O-glucosyltransferase, putative, expressed	gene	anthocyanidin 5,3-O-glucosyltransferase, putative, expressed	chr5	26130293	26132141	+	three_prime_UTR,downstream
3	LOC_Os07g48820	transcription factor, putative, expressed	gene	transcription factor, putative, expressed	chr7	29212431	29216419	+	CDS,three_prime_UTR,promoter
3	LOC_Os12g07540	growth regulator related protein, putative, expressed	gene	growth regulator related protein, putative, expressed	chr12	3752427	3757550	+	CDS,three_prime_UTR
3	LOC_Os08g39740	expressed protein	gene	expressed protein	chr8	25154187	25157198	-	CDS,three_prime_UTR
3	LOC_Os06g08140	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr6	3946927	3951252	-	CDS,three_prime_UTR
3	LOC_Os08g40530	calcium-transporting ATPase 9, plasma membrane-type, putative, expressed	gene	calcium-transporting ATPase 9, plasma membrane-type, putative, expressed	chr8	25649304	25657011	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g65580	mitotic checkpoint family protein, putative, expressed	gene	mitotic checkpoint family protein, putative, expressed	chr1	38063396	38070653	+	CDS
3	LOC_Os02g13400	expressed protein	gene	expressed protein	chr2	7144545	7150537	+	CDS,three_prime_UTR
3	LOC_Os05g40280	B3 DNA binding domain containing protein, expressed	gene	B3 DNA binding domain containing protein, expressed	chr5	23599277	23604102	-	three_prime_UTR,promoter
3	LOC_Os12g41780	glycosyl transferase family 17 protein, putative, expressed	gene	glycosyl transferase family 17 protein, putative, expressed	chr12	25849371	25852316	+	three_prime_UTR,downstream
3	LOC_Os07g25420	26S proteasome non-ATPase regulatory subunit 8, putative, expressed	gene	26S proteasome non-ATPase regulatory subunit 8, putative, expressed	chr7	14526454	14529530	-	CDS,three_prime_UTR
3	LOC_Os06g45990	patellin-5, putative, expressed	gene	patellin-5, putative, expressed	chr6	27874116	27877505	+	three_prime_UTR,promoter
3	LOC_Os07g11280	pentatricopeptide containing protein, putative, expressed	gene	pentatricopeptide containing protein, putative, expressed	chr7	6221176	6230672	-	CDS,three_prime_UTR
3	LOC_Os01g53680	6-phosphofructokinase, putative, expressed	gene	6-phosphofructokinase, putative, expressed	chr1	30839085	30844186	-	CDS
3	LOC_Os10g04700	OsFBX361 - F-box domain containing protein, expressed	gene	OsFBX361 - F-box domain containing protein, expressed	chr10	2241979	2244950	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g39580	calmodulin-binding heat-shock protein, putative, expressed	gene	calmodulin-binding heat-shock protein, putative, expressed	chr9	22715573	22719449	-	three_prime_UTR,downstream
3	LOC_Os01g15260	dynein light chain type 1 domain containing protein, expressed	gene	dynein light chain type 1 domain containing protein, expressed	chr1	8539621	8543588	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g39910	pentatricopeptide repeat domain containing protein, putative	gene	pentatricopeptide repeat domain containing protein, putative	chr7	23932069	23934495	-	CDS,promoter
3	LOC_Os01g63060	phosphatidic acid phosphatase-related, putative, expressed	gene	phosphatidic acid phosphatase-related, putative, expressed	chr1	36539104	36544153	+	CDS,three_prime_UTR
3	LOC_Os12g36770	lipase class 3 family protein, putative, expressed	gene	lipase class 3 family protein, putative, expressed	chr12	22496653	22501413	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g44580	expressed protein	gene	expressed protein	chr5	25872850	25876317	+	five_prime_UTR,CDS
3	LOC_Os02g35130	AIG1, putative, expressed	gene	AIG1, putative, expressed	chr2	21076774	21082545	+	CDS
3	LOC_Os11g38260	PAP fibrillin family domain containing protein, expressed	gene	PAP fibrillin family domain containing protein, expressed	chr11	22194341	22196213	+	three_prime_UTR,promoter
3	LOC_Os08g07890	NB-ARC domain containing protein	gene	NB-ARC domain containing protein	chr8	4439184	4447194	+	CDS
3	LOC_Os06g19480	expressed protein	gene	expressed protein	chr6	11093772	11096269	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g22960	hydrolase protein, putative, expressed	gene	hydrolase protein, putative, expressed	chr10	11875980	11880168	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g10940	metal cation transporter, putative, expressed	gene	metal cation transporter, putative, expressed	chr5	6090740	6094081	+	three_prime_UTR
3	LOC_Os12g26060	bifunctional dihydrofolate reductase-thymidylate synthase, putative, expressed	gene	bifunctional dihydrofolate reductase-thymidylate synthase, putative, expressed	chr12	15131743	15137531	+	CDS,promoter
3	LOC_Os08g21700	DCL, chloroplast precursor, putative, expressed	gene	DCL, chloroplast precursor, putative, expressed	chr8	12998589	13003403	-	CDS
3	LOC_Os05g37830	expressed protein	gene	expressed protein	chr5	22097671	22099834	-	three_prime_UTR,promoter
3	LOC_Os03g03700	MLO domain containing protein, putative, expressed	gene	MLO domain containing protein, putative, expressed	chr3	1643666	1647760	-	three_prime_UTR,promoter
3	LOC_Os12g37870	ATP-grasp domain containing protein, expressed	gene	ATP-grasp domain containing protein, expressed	chr12	23241555	23245606	+	CDS
3	LOC_Os03g10340	40S ribosomal protein S3a, putative, expressed	gene	40S ribosomal protein S3a, putative, expressed	chr3	5273923	5277012	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g63354	ELM2 domain containing protein, putative, expressed	gene	ELM2 domain containing protein, putative, expressed	chr1	36716931	36722118	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g35220	expressed protein	gene	expressed protein	chr2	21164661	21168014	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os11g37300	OsFBDUF53 - F-box and DUF domain containing protein, expressed	gene	OsFBDUF53 - F-box and DUF domain containing protein, expressed	chr11	21559631	21563619	+	three_prime_UTR
3	LOC_Os02g39950	EF hand family protein, putative, expressed	gene	EF hand family protein, putative, expressed	chr2	24152608	24157216	+	CDS,three_prime_UTR
3	LOC_Os05g45340	ATP binding protein, putative, expressed	gene	ATP binding protein, putative, expressed	chr5	26237770	26243058	+	CDS
3	LOC_Os01g61860	TBC domain containing protein, expressed	gene	TBC domain containing protein, expressed	chr1	35783419	35792885	-	CDS,three_prime_UTR
3	LOC_Os02g01710	peptidase family C78 domain containing protein, expressed	gene	peptidase family C78 domain containing protein, expressed	chr2	391819	395803	+	three_prime_UTR,downstream
3	LOC_Os03g20100	S1 RNA binding domain containing protein, expressed	gene	S1 RNA binding domain containing protein, expressed	chr3	11350149	11354491	-	CDS,three_prime_UTR
3	LOC_Os06g25294	60S ribosomal protein L18a-1, putative, expressed	gene	60S ribosomal protein L18a-1, putative, expressed	chr6	14808930	14814857	-	CDS,three_prime_UTR
3	LOC_Os11g22396	expressed protein	gene	expressed protein	chr11	12385535	12389741	+	three_prime_UTR,downstream
3	LOC_Os01g28150	OsFBX6 - F-box domain containing protein, expressed	gene	OsFBX6 - F-box domain containing protein, expressed	chr1	15776275	15779970	+	CDS,three_prime_UTR,five_prime_UTR
3	LOC_Os06g43630	sucrose-phosphate synthase, putative, expressed	gene	sucrose-phosphate synthase, putative, expressed	chr6	26241008	26249272	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g01660	mago nashi, putative, expressed	gene	mago nashi, putative, expressed	chr8	383088	387246	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g40780	keratinocytes-associated protein 2, putative, expressed	gene	keratinocytes-associated protein 2, putative, expressed	chr5	23845217	23848018	-	CDS,three_prime_UTR
3	LOC_Os07g30100	RIN3, putative, expressed	gene	RIN3, putative, expressed	chr7	17743008	17754353	-	three_prime_UTR,CDS
3	LOC_Os12g30314	conserved hypothetical protein	gene	conserved hypothetical protein	chr12	18165775	18167851	+	CDS,downstream
3	LOC_Os05g48320	60S ribosomal protein L37a, putative, expressed	gene	60S ribosomal protein L37a, putative, expressed	chr5	27637100	27639217	+	three_prime_UTR,CDS
3	LOC_Os03g57210	glycine-rich protein, putative, expressed	gene	glycine-rich protein, putative, expressed	chr3	32617483	32620757	+	CDS,three_prime_UTR
3	LOC_Os03g18550	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr3	10386907	10389839	+	three_prime_UTR,CDS,downstream
3	LOC_Os03g03510	CAMK_KIN1/SNF1/Nim1_like.15 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_KIN1/SNF1/Nim1_like.15 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr3	1513619	1518294	-	CDS
3	LOC_Os07g42660	OsCML13 - Calmodulin-related calcium sensor protein, expressed	gene	OsCML13 - Calmodulin-related calcium sensor protein, expressed	chr7	25539453	25541736	+	CDS,three_prime_UTR,promoter
3	LOC_Os05g07130	6PF-2-K/Fru-2,6-P2ASE liver isozyme, putative, expressed	gene	6PF-2-K/Fru-2,6-P2ASE liver isozyme, putative, expressed	chr5	3763090	3771440	+	CDS
3	LOC_Os07g06440	deoxyribonuclease tatD, putative, expressed	gene	deoxyribonuclease tatD, putative, expressed	chr7	3117816	3121519	+	CDS,downstream
3	LOC_Os09g14450	pollen signalling protein with adenylyl cyclase activity, putative, expressed	gene	pollen signalling protein with adenylyl cyclase activity, putative, expressed	chr9	8536184	8540653	+	CDS,downstream
3	LOC_Os01g01400	expressed protein	gene	expressed protein	chr1	200944	205743	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g31420	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr7	18609781	18613708	+	CDS,three_prime_UTR
3	LOC_Os02g13960	spotted leaf 11, putative, expressed	gene	spotted leaf 11, putative, expressed	chr2	7612541	7615851	+	CDS,three_prime_UTR
3	LOC_Os09g24200	RAD23 DNA repair protein, putative, expressed	gene	RAD23 DNA repair protein, putative, expressed	chr9	14361992	14365948	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g51770	expressed protein	gene	expressed protein	chr4	30493681	30496675	-	three_prime_UTR
3	LOC_Os01g20940	PHS1, putative, expressed	gene	PHS1, putative, expressed	chr1	11692783	11698999	+	CDS,three_prime_UTR
3	LOC_Os08g03590	expressed protein	gene	expressed protein	chr8	1676842	1679337	+	CDS,three_prime_UTR
3	LOC_Os01g68320	DEAD-box ATP-dependent RNA helicase 30, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase 30, putative, expressed	chr1	39687217	39692116	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g46480	ranBP1 domain containing protein, expressed	gene	ranBP1 domain containing protein, expressed	chr3	26286248	26291580	-	CDS,three_prime_UTR
3	LOC_Os04g37600	phosphate carrier protein, mitochondrial precursor, putative, expressed	gene	phosphate carrier protein, mitochondrial precursor, putative, expressed	chr4	22177122	22182087	+	CDS,three_prime_UTR
3	LOC_Os06g38470	histone deacetylase 19, putative, expressed	gene	histone deacetylase 19, putative, expressed	chr6	22793326	22799224	-	CDS,three_prime_UTR
3	LOC_Os04g58250	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr4	34495491	34500093	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g06380	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr12	3058458	3062810	+	CDS,three_prime_UTR
3	LOC_Os03g61140	expressed protein	gene	expressed protein	chr3	34721087	34724403	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g04110	expressed protein	gene	expressed protein	chr2	1788746	1792598	+	CDS,promoter
3	LOC_Os06g40040	protein of unknown function domain containing protein, expressed	gene	protein of unknown function domain containing protein, expressed	chr6	23820375	23822342	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g49580	nucleolar complex protein, putative, expressed	gene	nucleolar complex protein, putative, expressed	chr4	29386485	29392546	-	CDS,downstream
3	LOC_Os08g10570	bifunctional purine biosynthesis protein purH, putative, expressed	gene	bifunctional purine biosynthesis protein purH, putative, expressed	chr8	6217691	6223058	+	CDS
3	LOC_Os02g04510	UOS1, putative, expressed	gene	UOS1, putative, expressed	chr2	2001887	2005972	+	CDS,promoter
3	LOC_Os04g33950	E2F family transcription factor protein, putative, expressed	gene	E2F family transcription factor protein, putative, expressed	chr4	20377617	20383348	-	CDS,three_prime_UTR
3	LOC_Os01g36920	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr1	20569908	20575176	+	CDS,three_prime_UTR
3	LOC_Os07g47860	tRNA synthetase, putative, expressed	gene	tRNA synthetase, putative, expressed	chr7	28583757	28592374	-	CDS,three_prime_UTR
3	LOC_Os03g46440	BTBA4 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed	gene	BTBA4 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed	chr3	26257756	26265292	-	CDS,three_prime_UTR
3	LOC_Os02g40430	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr2	24483246	24495968	-	CDS,promoter
3	LOC_Os07g35870	basic helix-loop-helix DND-binding domain containing protein, expressed	gene	basic helix-loop-helix DND-binding domain containing protein, expressed	chr7	21465743	21468864	-	CDS
3	LOC_Os12g03630	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	gene	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	chr12	1451167	1455276	+	CDS
3	LOC_Os09g10750	rhodanese-like, putative, expressed	gene	rhodanese-like, putative, expressed	chr9	5865442	5869676	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g13800	ufm1-conjugating enzyme 1, putative, expressed	gene	ufm1-conjugating enzyme 1, putative, expressed	chr10	7511694	7514609	+	three_prime_UTR,downstream
3	LOC_Os03g19020	PHD-finger family protein, expressed	gene	PHD-finger family protein, expressed	chr3	10650108	10654572	+	CDS,three_prime_UTR,promoter
3	LOC_Os04g57940	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr4	34330295	34332403	-	three_prime_UTR,promoter
3	LOC_Os12g42850	amino acid permease, putative, expressed	gene	amino acid permease, putative, expressed	chr12	26587454	26592524	-	CDS,three_prime_UTR
3	LOC_Os11g38810	mannose-6-phosphate isomerase, putative, expressed	gene	mannose-6-phosphate isomerase, putative, expressed	chr11	22611390	22615553	+	CDS,three_prime_UTR
3	LOC_Os09g14019	expressed protein	gene	expressed protein	chr9	8281691	8285162	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os01g33040	kinesin motor domain containing protein, expressed	gene	kinesin motor domain containing protein, expressed	chr1	18149848	18156798	+	CDS,downstream
3	LOC_Os01g74650	cysteine synthase, mitochondrial precursor, putative, expressed	gene	cysteine synthase, mitochondrial precursor, putative, expressed	chr1	43230891	43237462	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g01690	expressed protein	gene	expressed protein	chr5	411095	419540	+	CDS
3	LOC_Os10g35520	hydrolase, alpha/beta fold family domain containing protein, expressed	gene	hydrolase, alpha/beta fold family domain containing protein, expressed	chr10	18927356	18929594	+	CDS,three_prime_UTR
3	LOC_Os04g58980	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr4	34899372	34903900	-	CDS,promoter,downstream
3	LOC_Os08g41420	expressed protein	gene	expressed protein	chr8	26151303	26155149	-	CDS,promoter
3	LOC_Os07g15280	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	8811242	8814253	-	CDS,promoter
3	LOC_Os06g48940	GHMP kinases ATP-binding protein, putative, expressed	gene	GHMP kinases ATP-binding protein, putative, expressed	chr6	29625218	29633691	+	CDS,three_prime_UTR
3	LOC_Os08g38880	WD-40 repeat family protein, putative, expressed	gene	WD-40 repeat family protein, putative, expressed	chr8	24572848	24576644	+	CDS
3	LOC_Os03g43730	tesmin/TSO1-like CXC domain containing protein, expressed	gene	tesmin/TSO1-like CXC domain containing protein, expressed	chr3	24453032	24459741	-	CDS,promoter
3	LOC_Os02g56520	expressed protein	gene	expressed protein	chr2	34608701	34612854	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g43420	expressed protein	gene	expressed protein	chr1	24842686	24845871	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g36520	OsFBK9 - F-box domain and kelch repeat containing protein, expressed	gene	OsFBK9 - F-box domain and kelch repeat containing protein, expressed	chr2	22054931	22058307	+	CDS,three_prime_UTR
3	LOC_Os01g39060	expressed protein	gene	expressed protein	chr1	21954848	21962308	+	three_prime_UTR
3	LOC_Os01g25760	powdery mildew resistance protein PM3F, putative, expressed	gene	powdery mildew resistance protein PM3F, putative, expressed	chr1	14596764	14601950	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g51520	fip1 motif family protein, expressed	gene	fip1 motif family protein, expressed	chr3	29460597	29471080	+	CDS,three_prime_UTR,promoter
3	LOC_Os08g41340	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr8	26117860	26120789	-	three_prime_UTR,promoter
3	LOC_Os08g39150	expressed protein	gene	expressed protein	chr8	24724231	24728509	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g44860	aminopeptidase, putative, expressed	gene	aminopeptidase, putative, expressed	chr8	28170517	28179029	-	CDS,downstream
3	LOC_Os06g37610	Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed	gene	Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed	chr6	22265803	22270152	+	three_prime_UTR,CDS,downstream
3	LOC_Os05g39690	oxidoreductase, aldo/keto reductase family protein, putative, expressed	gene	oxidoreductase, aldo/keto reductase family protein, putative, expressed	chr5	23234878	23237893	+	CDS,three_prime_UTR,promoter
3	LOC_Os10g25060	expressed protein	gene	expressed protein	chr10	12828154	12830940	-	CDS,three_prime_UTR
3	LOC_Os01g68390	Uncharacterized ACR, COG1565 containing protein, putative, expressed	gene	Uncharacterized ACR, COG1565 containing protein, putative, expressed	chr1	39736063	39740721	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g50000	LYR motif containing protein, putative, expressed	gene	LYR motif containing protein, putative, expressed	chr6	30278365	30280772	-	CDS,three_prime_UTR
3	LOC_Os11g08100	eukaryotic aspartyl protease domain containing protein, expressed	gene	eukaryotic aspartyl protease domain containing protein, expressed	chr11	4243201	4247908	+	CDS,three_prime_UTR
3	LOC_Os04g38950	class I glutamine amidotransferase, putative, expressed	gene	class I glutamine amidotransferase, putative, expressed	chr4	22954013	22957676	-	CDS,three_prime_UTR
3	LOC_Os02g07780	OsSPL4 - SBP-box gene family member, expressed	gene	OsSPL4 - SBP-box gene family member, expressed	chr2	4073880	4077946	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g48880	expressed protein	gene	expressed protein	chr6	29595076	29597297	-	five_prime_UTR,CDS
3	LOC_Os01g21940	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr1	12302144	12308409	-	CDS
3	LOC_Os07g46460	ferredoxin-dependent glutamate synthase, chloroplast precursor, putative, expressed	gene	ferredoxin-dependent glutamate synthase, chloroplast precursor, putative, expressed	chr7	27722022	27737546	-	CDS,promoter
3	LOC_Os01g50830	expressed protein	gene	expressed protein	chr1	29190789	29193689	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g06100	TLD family protein, putative, expressed	gene	TLD family protein, putative, expressed	chr12	2850824	2855294	-	CDS,three_prime_UTR
3	LOC_Os07g39114	expressed protein	gene	expressed protein	chr7	23434753	23436333	-	three_prime_UTR
3	LOC_Os11g15520	OsSub62 - Putative Subtilisin homologue, expressed	gene	OsSub62 - Putative Subtilisin homologue, expressed	chr11	8784529	8792759	-	CDS
3	LOC_Os09g27420	formate--tetrahydrofolate ligase, putative, expressed	gene	formate--tetrahydrofolate ligase, putative, expressed	chr9	16653463	16657666	+	CDS
3	LOC_Os08g21541	expressed protein	gene	expressed protein	chr8	12828707	12833874	+	three_prime_UTR,downstream
3	LOC_Os02g49360	RNA methyltransferase domain-containing protein 2, putative, expressed	gene	RNA methyltransferase domain-containing protein 2, putative, expressed	chr2	30153263	30155849	+	CDS
3	LOC_Os02g54580	serine esterase family protein, putative, expressed	gene	serine esterase family protein, putative, expressed	chr2	33424080	33427884	+	CDS,three_prime_UTR
3	LOC_Os02g49050	transmembrane 9 superfamily member, putative, expressed	gene	transmembrane 9 superfamily member, putative, expressed	chr2	29978685	29981790	+	three_prime_UTR,downstream
3	LOC_Os05g26954	saposin-like type B, region 1 family protein, putative, expressed	gene	saposin-like type B, region 1 family protein, putative, expressed	chr5	15599198	15605034	-	CDS,three_prime_UTR
3	LOC_Os06g01630	2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed	gene	2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed	chr6	369059	374155	-	CDS,three_prime_UTR
3	LOC_Os11g05394	nucampholin, putative, expressed	gene	nucampholin, putative, expressed	chr11	2414381	2419269	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os02g56360	expressed protein	gene	expressed protein	chr2	34494718	34498687	+	CDS,three_prime_UTR
3	LOC_Os08g34070	DCN1, putative, expressed	gene	DCN1, putative, expressed	chr8	21352670	21358025	+	CDS,three_prime_UTR
3	LOC_Os02g02500	remorin family protein, putative, expressed	gene	remorin family protein, putative, expressed	chr2	890263	894233	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g56520	double-stranded RNA binding motif containing protein, expressed	gene	double-stranded RNA binding motif containing protein, expressed	chr1	32585829	32591002	-	CDS,three_prime_UTR
3	LOC_Os02g08120	calmodulin binding protein, putative, expressed	gene	calmodulin binding protein, putative, expressed	chr2	4293245	4299056	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g45590	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr11	27119365	27124615	+	CDS
3	LOC_Os08g43920	carrier, putative, expressed	gene	carrier, putative, expressed	chr8	27678526	27679419	+	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g39270	NAD binding domain of 6-phosphogluconate dehydrogenase containing protein, expressed	gene	NAD binding domain of 6-phosphogluconate dehydrogenase containing protein, expressed	chr1	22087159	22089975	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g01820	expressed protein	gene	expressed protein	chr10	528404	532578	+	three_prime_UTR,downstream
3	LOC_Os11g47160	receptor kinase 1, putative	gene	receptor kinase 1, putative	chr11	27848036	27850764	+	CDS,downstream
3	LOC_Os08g41500	ubiquitin-associated protein, putative, expressed	gene	ubiquitin-associated protein, putative, expressed	chr8	26211688	26216530	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g20670	ELMO/CED-12 family protein, putative, expressed	gene	ELMO/CED-12 family protein, putative, expressed	chr3	11692311	11695864	+	CDS
3	LOC_Os06g01850	ferredoxin--NADP reductase, chloroplast precursor, putative, expressed	gene	ferredoxin--NADP reductase, chloroplast precursor, putative, expressed	chr6	478179	480670	-	three_prime_UTR
3	LOC_Os02g09359	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	gene	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	chr2	4808231	4817116	-	CDS
3	LOC_Os01g44280	expressed protein	gene	expressed protein	chr1	25407788	25410995	-	CDS
3	LOC_Os08g44530	dihydroxy-acid dehydratase, putative, expressed	gene	dihydroxy-acid dehydratase, putative, expressed	chr8	28002137	28006667	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g21610	uncharacterized aarF domain-containing protein kinase 4, putative, expressed	gene	uncharacterized aarF domain-containing protein kinase 4, putative, expressed	chr1	12107843	12109691	+	CDS,three_prime_UTR
3	LOC_Os03g02440	WD repeat-containing protein 44, putative, expressed	gene	WD repeat-containing protein 44, putative, expressed	chr3	869489	875535	+	CDS
3	LOC_Os01g59160	UBA/TS-N domain containing protein, expressed	gene	UBA/TS-N domain containing protein, expressed	chr1	34174877	34178754	-	CDS,promoter
3	LOC_Os05g08990	glutaminyl-tRNA synthetase, putative, expressed	gene	glutaminyl-tRNA synthetase, putative, expressed	chr5	4976688	4981840	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g36660	calmodulin binding protein, putative, expressed	gene	calmodulin binding protein, putative, expressed	chr4	21964640	21970277	+	CDS
3	LOC_Os01g33762	expressed protein	gene	expressed protein	chr1	18584499	18586649	+	CDS,promoter,downstream
3	LOC_Os02g15950	OsFBK5 - F-box domain and kelch repeat containing protein, expressed	gene	OsFBK5 - F-box domain and kelch repeat containing protein, expressed	chr2	9042074	9046139	+	three_prime_UTR
3	LOC_Os05g41100	protein kri1, putative, expressed	gene	protein kri1, putative, expressed	chr5	24013013	24015304	-	three_prime_UTR,promoter
3	LOC_Os01g42480	Yip1 domain containing protein, expressed	gene	Yip1 domain containing protein, expressed	chr1	24149939	24153057	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g12040	receptor-like protein kinase precursor, putative	gene	receptor-like protein kinase precursor, putative	chr2	6254346	6256373	-	CDS,promoter,downstream
3	LOC_Os01g34614	DNA directed RNA polymerase, 7 kDa subunit domain containing protein, expressed	gene	DNA directed RNA polymerase, 7 kDa subunit domain containing protein, expressed	chr1	19084787	19087245	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g51780	auxin efflux carrier component, putative, expressed	gene	auxin efflux carrier component, putative, expressed	chr1	29774744	29777428	-	CDS
3	LOC_Os03g10200	ethylene-responsive element-binding protein, putative, expressed	gene	ethylene-responsive element-binding protein, putative, expressed	chr3	5174140	5178234	+	CDS,three_prime_UTR
3	LOC_Os08g37260	expressed protein	gene	expressed protein	chr8	23549151	23553632	-	CDS,three_prime_UTR
3	LOC_Os05g48422	60S ribosomal protein-related, putative, expressed	gene	60S ribosomal protein-related, putative, expressed	chr5	27702214	27704017	-	three_prime_UTR,promoter
3	LOC_Os01g10150	CK1_CaseinKinase_1a.1 - CK1 includes the casein kinase 1 kinases, expressed	gene	CK1_CaseinKinase_1a.1 - CK1 includes the casein kinase 1 kinases, expressed	chr1	5327818	5334518	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g36170	cytokinesis negative regulator RCP1, putative, expressed	gene	cytokinesis negative regulator RCP1, putative, expressed	chr8	22805752	22811723	+	three_prime_UTR,downstream
3	LOC_Os10g41180	expressed protein	gene	expressed protein	chr10	22050260	22052443	-	three_prime_UTR,promoter,downstream
3	LOC_Os03g23020	expressed protein	gene	expressed protein	chr3	13288043	13290181	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g55990	homeobox domain containing protein, expressed	gene	homeobox domain containing protein, expressed	chr3	31862024	31864398	+	CDS,three_prime_UTR
3	LOC_Os01g49120	MATE efflux family protein, putative, expressed	gene	MATE efflux family protein, putative, expressed	chr1	28233658	28237590	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g16690	expressed protein	gene	expressed protein	chr2	9539378	9542538	+	CDS
3	LOC_Os01g70140	ubiquitin-conjugating enzyme E2-22 kDa, putative, expressed	gene	ubiquitin-conjugating enzyme E2-22 kDa, putative, expressed	chr1	40594809	40598068	-	CDS,three_prime_UTR
3	LOC_Os02g06930	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr2	3504419	3508754	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os12g39710	expressed protein	gene	expressed protein	chr12	24493118	24496426	+	three_prime_UTR
3	LOC_Os08g13780	U-box domain-containing protein, putative	gene	U-box domain-containing protein, putative	chr8	8215431	8218051	+	CDS,downstream
3	LOC_Os03g13250	peptide transporter PTR2, putative, expressed	gene	peptide transporter PTR2, putative, expressed	chr3	7146276	7150338	-	CDS
3	LOC_Os01g55890	amino acid kinase, putative, expressed	gene	amino acid kinase, putative, expressed	chr1	32184362	32188712	-	CDS,three_prime_UTR
3	LOC_Os02g12420	receptor-like protein kinase precursor, putative, expressed	gene	receptor-like protein kinase precursor, putative, expressed	chr2	6476660	6480097	-	CDS
3	LOC_Os07g15440	alanyl-tRNA synthetase family protein, expressed	gene	alanyl-tRNA synthetase family protein, expressed	chr7	8929415	8942864	-	CDS,promoter
3	LOC_Os12g36940	calmodulin binding protein, putative, expressed	gene	calmodulin binding protein, putative, expressed	chr12	22614559	22622709	+	CDS,downstream
3	LOC_Os10g21470	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr10	10920080	10926205	-	three_prime_UTR
3	LOC_Os04g52410	OsMADS31 - MADS-box family gene with MIKCc type-box, expressed	gene	OsMADS31 - MADS-box family gene with MIKCc type-box, expressed	chr4	30957972	30959777	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g32710	40S ribosomal protein S27, putative, expressed	gene	40S ribosomal protein S27, putative, expressed	chr4	19540752	19545000	+	CDS,three_prime_UTR
3	LOC_Os10g10190	ATP-binding region, ATPase-like domain containing protein, expressed	gene	ATP-binding region, ATPase-like domain containing protein, expressed	chr10	5611556	5626984	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g24190	cyclin-T1-2, putative, expressed	gene	cyclin-T1-2, putative, expressed	chr2	14001044	14012253	+	CDS,three_prime_UTR
3	LOC_Os03g58400	C-5 cytosine-specific DNA methylase, putative, expressed	gene	C-5 cytosine-specific DNA methylase, putative, expressed	chr3	33271792	33274036	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g52280	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr1	30054522	30055994	+	CDS,downstream
3	LOC_Os03g21810	insulin-degrading enzyme, putative, expressed	gene	insulin-degrading enzyme, putative, expressed	chr3	12457160	12467751	+	CDS
3	LOC_Os03g48180	peptide transporter PTR2, putative, expressed	gene	peptide transporter PTR2, putative, expressed	chr3	27406523	27411830	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g48310	inactive receptor kinase At2g26730 precursor, putative, expressed	gene	inactive receptor kinase At2g26730 precursor, putative, expressed	chr7	28862565	28867637	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os10g40650	holliday junction resolvase, putative, expressed	gene	holliday junction resolvase, putative, expressed	chr10	21730215	21732829	-	three_prime_UTR,promoter
3	LOC_Os02g06370	whirly transcription factor domain containing protein, expressed	gene	whirly transcription factor domain containing protein, expressed	chr2	3182866	3187036	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g15910	potassium transporter, putative, expressed	gene	potassium transporter, putative, expressed	chr6	9032863	9036776	-	CDS,promoter
3	LOC_Os04g33490	neutral/alkaline invertase, putative, expressed	gene	neutral/alkaline invertase, putative, expressed	chr4	20084182	20087562	+	CDS,promoter
3	LOC_Os02g20190	Leucine Rich Repeat family protein	gene	Leucine Rich Repeat family protein	chr2	11895621	11896751	-	CDS
3	LOC_Os07g36260	transposon protein, putative, Pong sub-class, expressed	gene	transposon protein, putative, Pong sub-class, expressed	chr7	21673784	21677263	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os05g48750	3-deoxy-manno-octulosonate cytidylyltransferase, putative, expressed	gene	3-deoxy-manno-octulosonate cytidylyltransferase, putative, expressed	chr5	27873483	27876701	-	CDS,three_prime_UTR
3	LOC_Os07g48300	eukaryotic translation initiation factor 2 subunit beta, putative, expressed	gene	eukaryotic translation initiation factor 2 subunit beta, putative, expressed	chr7	28858016	28862215	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os10g30750	appr-1-p processing enzyme family protein, putative, expressed	gene	appr-1-p processing enzyme family protein, putative, expressed	chr10	15945600	15950152	+	CDS,three_prime_UTR
3	LOC_Os05g48030	anti-silencing protein, ASF1-like domain containing protein, expressed	gene	anti-silencing protein, ASF1-like domain containing protein, expressed	chr5	27471637	27476843	+	CDS,promoter
3	LOC_Os01g01920	HD domain containing protein 2, putative, expressed	gene	HD domain containing protein 2, putative, expressed	chr1	497454	505264	+	CDS,three_prime_UTR
3	LOC_Os02g39530	expressed protein	gene	expressed protein	chr2	23849986	23852647	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g12660	AAA-type ATPase family protein, putative, expressed	gene	AAA-type ATPase family protein, putative, expressed	chr1	6969861	6975710	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g11300	expressed protein	gene	expressed protein	chr7	6233812	6235854	-	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os05g41530	ZOS5-11 - C2H2 zinc finger protein, expressed	gene	ZOS5-11 - C2H2 zinc finger protein, expressed	chr5	24250272	24254486	+	CDS
3	LOC_Os11g14950	ACT domain containing protein, expressed	gene	ACT domain containing protein, expressed	chr11	8412094	8417311	-	CDS
3	LOC_Os11g37070	expressed protein	gene	expressed protein	chr11	21417039	21422620	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g60190	oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed	gene	oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed	chr3	34227316	34231276	+	CDS,three_prime_UTR
3	LOC_Os10g39670	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr10	21128241	21133260	+	CDS
3	LOC_Os01g06510	arginyl-tRNA synthetase, putative, expressed	gene	arginyl-tRNA synthetase, putative, expressed	chr1	3059994	3065189	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g08569	cycloartenol synthase, putative, expressed	gene	cycloartenol synthase, putative, expressed	chr11	4518241	4553918	+	three_prime_UTR,downstream
3	LOC_Os08g07760	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	gene	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	chr8	4343174	4349505	+	CDS,three_prime_UTR
3	LOC_Os02g35230	expressed protein	gene	expressed protein	chr2	21169120	21174303	-	CDS,three_prime_UTR
3	LOC_Os01g43020	CTP synthase, putative, expressed	gene	CTP synthase, putative, expressed	chr1	24497747	24503812	-	CDS,three_prime_UTR
3	LOC_Os03g15190	expressed protein	gene	expressed protein	chr3	8306234	8310495	-	CDS
3	LOC_Os10g40100	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr10	21396085	21401245	-	CDS,downstream
3	LOC_Os01g41190	glycine-rich protein, putative, expressed	gene	glycine-rich protein, putative, expressed	chr1	23315172	23321871	+	CDS,three_prime_UTR
3	LOC_Os02g05440	expressed protein	gene	expressed protein	chr2	2614245	2619025	+	CDS,three_prime_UTR,promoter
3	LOC_Os04g46370	L-asparaginase precursor protein, putative, expressed	gene	L-asparaginase precursor protein, putative, expressed	chr4	27309326	27312878	-	CDS,three_prime_UTR
3	LOC_Os05g11850	glycosyl hydrolase family 47 domain contain protein, expressed	gene	glycosyl hydrolase family 47 domain contain protein, expressed	chr5	6752164	6756336	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g39310	SEY1, putative, expressed	gene	SEY1, putative, expressed	chr1	22119272	22127682	+	CDS,three_prime_UTR
3	LOC_Os02g44890	RNA-binding region RNP-1, putative, expressed	gene	RNA-binding region RNP-1, putative, expressed	chr2	27182150	27186029	-	CDS
3	LOC_Os02g28040	lipase, putative, expressed	gene	lipase, putative, expressed	chr2	16596798	16606368	-	CDS
3	LOC_Os05g46260	exostosin, putative, expressed	gene	exostosin, putative, expressed	chr5	26761830	26766539	+	CDS,promoter,downstream
3	LOC_Os07g06890	FAD-linked oxidoreductase protein, putative, expressed	gene	FAD-linked oxidoreductase protein, putative, expressed	chr7	3362009	3369021	-	three_prime_UTR,promoter
3	LOC_Os01g51280	5-nucleotidase surE, putative, expressed	gene	5-nucleotidase surE, putative, expressed	chr1	29478063	29481820	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g18880	UBX domain-containing protein, putative, expressed	gene	UBX domain-containing protein, putative, expressed	chr11	10732841	10742083	-	CDS
3	LOC_Os09g21000	potassium transporter, putative, expressed	gene	potassium transporter, putative, expressed	chr9	12661737	12666522	-	CDS,three_prime_UTR
3	LOC_Os06g08170	transporter, major facilitator family, putative, expressed	gene	transporter, major facilitator family, putative, expressed	chr6	3960924	3963855	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g12794	elongation factor 1-gamma, putative, expressed	gene	elongation factor 1-gamma, putative, expressed	chr2	6716994	6720424	+	CDS,three_prime_UTR
3	LOC_Os01g13390	expressed protein	gene	expressed protein	chr1	7456835	7458959	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g68790	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr1	39953486	39955641	+	three_prime_UTR
3	LOC_Os08g34190	stromal cell-derived factor 2-like protein precursor, putative, expressed	gene	stromal cell-derived factor 2-like protein precursor, putative, expressed	chr8	21430885	21434022	-	CDS,three_prime_UTR
3	LOC_Os02g45320	OsFBX58 - F-box domain containing protein, expressed	gene	OsFBX58 - F-box domain containing protein, expressed	chr2	27542530	27545723	+	CDS,three_prime_UTR
3	LOC_Os11g33330	peptidase, M24 family protein, putative, expressed	gene	peptidase, M24 family protein, putative, expressed	chr11	19243631	19251986	-	CDS,promoter
3	LOC_Os07g07150	expressed protein	gene	expressed protein	chr7	3538487	3541192	-	CDS
3	LOC_Os04g38840	LTPL81 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	gene	LTPL81 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	chr4	22908007	22908930	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g29280	disease resistance protein RGA3, putative, expressed	gene	disease resistance protein RGA3, putative, expressed	chr12	17348789	17351185	+	CDS,promoter
3	LOC_Os03g23909	vegetative incompatibility protein HET-E-1, putative	gene	vegetative incompatibility protein HET-E-1, putative	chr3	13569721	13576074	+	CDS,three_prime_UTR
3	LOC_Os03g55820	thioredoxin, putative, expressed	gene	thioredoxin, putative, expressed	chr3	31771148	31774295	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g08290	expressed protein	gene	expressed protein	chr3	4221085	4222995	+	three_prime_UTR,downstream
3	LOC_Os02g12900	cysteine synthase, putative, expressed	gene	cysteine synthase, putative, expressed	chr2	6810648	6814112	+	CDS,three_prime_UTR,five_prime_UTR,downstream
3	LOC_Os12g33080	2-oxoglutarate/malate translocator, chloroplast precursor, putative, expressed	gene	2-oxoglutarate/malate translocator, chloroplast precursor, putative, expressed	chr12	19976814	19980331	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g29110	thioredoxin, putative, expressed	gene	thioredoxin, putative, expressed	chr8	17815710	17817807	-	CDS,downstream
3	LOC_Os02g10040	guanine nucleotide-exchange protein like, putative, expressed	gene	guanine nucleotide-exchange protein like, putative, expressed	chr2	5220249	5221797	-	five_prime_UTR,CDS,downstream
3	LOC_Os01g56400	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr1	32512649	32515984	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g48330	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr1	27691513	27701432	-	CDS
3	LOC_Os11g35400	AMP-binding enzyme, putative, expressed	gene	AMP-binding enzyme, putative, expressed	chr11	20277617	20282385	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g47020	genetic modifier, putative, expressed	gene	genetic modifier, putative, expressed	chr4	27682940	27685232	+	CDS,three_prime_UTR
3	LOC_Os01g29430	tetratricopeptide-like helical, putative, expressed	gene	tetratricopeptide-like helical, putative, expressed	chr1	16494331	16502303	+	three_prime_UTR,promoter
3	LOC_Os01g74250	plant-specific domain TIGR01615 family protein, expressed	gene	plant-specific domain TIGR01615 family protein, expressed	chr1	43015882	43018083	+	three_prime_UTR
3	LOC_Os02g48330	3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed	gene	3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed	chr2	29581069	29586122	-	CDS,three_prime_UTR
3	LOC_Os01g67560	Divergent PAP2 family domain containing protein, expressed	gene	Divergent PAP2 family domain containing protein, expressed	chr1	39265662	39268576	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g03480	alpha-N-arabinofuranosidase, putative, expressed	gene	alpha-N-arabinofuranosidase, putative, expressed	chr12	1367900	1374574	+	CDS,three_prime_UTR
3	LOC_Os03g06620	1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase protein, putative, expressed	gene	1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase protein, putative, expressed	chr3	3337265	3340256	+	CDS,three_prime_UTR
3	LOC_Os08g06800	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr8	3791101	3794541	-	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os05g05160	CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	gene	CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	chr5	2511518	2518081	+	CDS
3	LOC_Os04g35300	SLL1 protein, putative, expressed	gene	SLL1 protein, putative, expressed	chr4	21294536	21296663	-	three_prime_UTR,promoter,downstream
3	LOC_Os04g44610	white-brown complex homolog protein 11, putative, expressed	gene	white-brown complex homolog protein 11, putative, expressed	chr4	26210785	26216535	+	CDS,downstream
3	LOC_Os07g46039	expressed protein	gene	expressed protein	chr7	27473819	27478862	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os03g54091	OsTOP6A1 - Topoisomerase 6 subunit A homolog 1, expressed	gene	OsTOP6A1 - Topoisomerase 6 subunit A homolog 1, expressed	chr3	31002865	31006827	+	CDS,promoter,downstream
3	LOC_Os01g68324	dolichyl-diphosphooligosaccharide--protein glycosyltransferase 63 kDasubunit precursor, putative, expressed	gene	dolichyl-diphosphooligosaccharide--protein glycosyltransferase 63 kDasubunit precursor, putative, expressed	chr1	39694920	39702164	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g32050	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr4	19048842	19053417	+	CDS,three_prime_UTR
3	LOC_Os01g41990	OsCML12 - Calmodulin-related calcium sensor protein, expressed	gene	OsCML12 - Calmodulin-related calcium sensor protein, expressed	chr1	23809104	23810513	-	three_prime_UTR,promoter
3	LOC_Os02g52314	BTB1 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain, expressed	gene	BTB1 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain, expressed	chr2	32017446	32021283	-	three_prime_UTR
3	LOC_Os01g53670	ENTH domain containing protein, expressed	gene	ENTH domain containing protein, expressed	chr1	30831752	30835690	+	CDS,promoter
3	LOC_Os03g02540	proteasome subunit, putative, expressed	gene	proteasome subunit, putative, expressed	chr3	934041	938212	-	CDS,three_prime_UTR
3	LOC_Os10g39830	expressed protein	gene	expressed protein	chr10	21244829	21247831	+	CDS
3	LOC_Os02g30140	expressed protein	gene	expressed protein	chr2	17899248	17903831	+	three_prime_UTR,downstream
3	LOC_Os11g29390	bifunctional dihydrofolate reductase-thymidylate synthase, putative, expressed	gene	bifunctional dihydrofolate reductase-thymidylate synthase, putative, expressed	chr11	16587878	16595301	+	CDS,three_prime_UTR,promoter
3	LOC_Os06g49040	Myb-like DNA-binding domain containing protein, putative, expressed	gene	Myb-like DNA-binding domain containing protein, putative, expressed	chr6	29722459	29726124	+	CDS
3	LOC_Os02g37862	60S ribosomal protein L6, putative, expressed	gene	60S ribosomal protein L6, putative, expressed	chr2	22876233	22878287	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g18200	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr3	10203735	10209222	+	CDS,three_prime_UTR
3	LOC_Os09g35670	expressed protein	gene	expressed protein	chr9	20518754	20522095	+	three_prime_UTR,downstream
3	LOC_Os09g29470	AGAP005770-PA, putative, expressed	gene	AGAP005770-PA, putative, expressed	chr9	17917677	17922875	+	three_prime_UTR,CDS
3	LOC_Os01g07410	growth regulator related protein, putative, expressed	gene	growth regulator related protein, putative, expressed	chr1	3510835	3514902	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g39130	zinc finger, C3HC4 type family protein, expressed	gene	zinc finger, C3HC4 type family protein, expressed	chr11	22824924	22828433	+	three_prime_UTR,CDS
3	LOC_Os04g31030	nitrate-induced NOI protein, expressed	gene	nitrate-induced NOI protein, expressed	chr4	18375323	18379027	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g33940	protein of unknown function DUF1279 domain containing protein, expressed	gene	protein of unknown function DUF1279 domain containing protein, expressed	chr4	20376899	20379003	+	three_prime_UTR,downstream
3	LOC_Os02g39520	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr2	23843870	23849372	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g27430	NB-ARC domain containing protein	gene	NB-ARC domain containing protein	chr11	15323054	15327578	-	CDS
3	LOC_Os11g26130	receptor protein kinase TMK1 precursor, putative, expressed	gene	receptor protein kinase TMK1 precursor, putative, expressed	chr11	14497283	14504802	+	CDS,three_prime_UTR
3	LOC_Os03g39710	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr3	22090506	22093879	-	CDS
3	LOC_Os01g58459	expressed protein	gene	expressed protein	chr1	33789246	33793056	+	CDS,five_prime_UTR
3	LOC_Os11g11780	cysteine-rich receptor-like protein kinase 21 precursor, putative, expressed	gene	cysteine-rich receptor-like protein kinase 21 precursor, putative, expressed	chr11	6534826	6537442	+	CDS,three_prime_UTR
3	LOC_Os06g05580	OsFBDUF30 - F-box and DUF domain containing protein, expressed	gene	OsFBDUF30 - F-box and DUF domain containing protein, expressed	chr6	2528061	2530720	+	five_prime_UTR,CDS
3	LOC_Os07g35960	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	21512069	21516018	+	CDS
3	LOC_Os04g37750	expressed protein	gene	expressed protein	chr4	22260207	22262308	+	three_prime_UTR,downstream
3	LOC_Os02g13170	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr2	7016805	7024341	+	CDS
3	LOC_Os04g46460	amino acid kinase, putative, expressed	gene	amino acid kinase, putative, expressed	chr4	27378091	27381445	+	three_prime_UTR,downstream
3	LOC_Os09g25860	expressed protein	gene	expressed protein	chr9	15497414	15505057	-	CDS,downstream
3	LOC_Os05g39680	PX domain containing protein, expressed	gene	PX domain containing protein, expressed	chr5	23225291	23234818	+	CDS,promoter,downstream
3	LOC_Os02g03220	protein binding protein, putative, expressed	gene	protein binding protein, putative, expressed	chr2	1283155	1288182	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g44330	DJ-1 family protein, putative, expressed	gene	DJ-1 family protein, putative, expressed	chr5	25733718	25740657	+	CDS,three_prime_UTR
3	LOC_Os04g42430	EF hand family protein, putative, expressed	gene	EF hand family protein, putative, expressed	chr4	24925896	24930049	+	CDS,three_prime_UTR
3	LOC_Os08g28230	IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed	gene	IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed	chr8	17222457	17225319	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g30730	holocarboxylase synthetase, putative, expressed	gene	holocarboxylase synthetase, putative, expressed	chr8	18954090	18958383	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g03600	OsFBX343 - F-box domain containing protein, expressed	gene	OsFBX343 - F-box domain containing protein, expressed	chr10	1555725	1559589	+	CDS,three_prime_UTR
3	LOC_Os06g06920	S-locus-like receptor protein kinase, putative	gene	S-locus-like receptor protein kinase, putative	chr6	3280883	3284653	-	CDS,promoter,downstream
3	LOC_Os11g46980	receptor-like protein kinase 2 precursor, putative	gene	receptor-like protein kinase 2 precursor, putative	chr11	27712793	27717820	+	CDS,promoter
3	LOC_Os02g50990	RING-H2 finger protein ATL1Q, putative, expressed	gene	RING-H2 finger protein ATL1Q, putative, expressed	chr2	31184873	31189372	+	three_prime_UTR,CDS
3	LOC_Os08g39490	expressed protein	gene	expressed protein	chr8	24983369	24988506	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g01620	RNA pseudouridine synthase, putative, expressed	gene	RNA pseudouridine synthase, putative, expressed	chr9	436172	442033	+	CDS
3	LOC_Os01g34700	dienelactone hydrolase family protein, expressed	gene	dienelactone hydrolase family protein, expressed	chr1	19134757	19138850	+	CDS,three_prime_UTR
3	LOC_Os02g48610	mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	gene	mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	chr2	29750142	29752721	+	CDS,three_prime_UTR
3	LOC_Os08g20636	expressed protein	gene	expressed protein	chr8	12394042	12396311	-	three_prime_UTR
3	LOC_Os06g41880	OsSub51 - Putative Subtilisin homologue, expressed	gene	OsSub51 - Putative Subtilisin homologue, expressed	chr6	25117152	25125145	+	CDS,downstream
3	LOC_Os02g04700	tRNA synthetases class II domain containing protein, expressed	gene	tRNA synthetases class II domain containing protein, expressed	chr2	2124896	2128770	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g54160	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr2	33193935	33196815	-	three_prime_UTR,promoter
3	LOC_Os02g01490	expressed protein	gene	expressed protein	chr2	279583	285795	+	CDS,downstream
3	LOC_Os01g61880	respiratory burst oxidase, putative, expressed	gene	respiratory burst oxidase, putative, expressed	chr1	35812105	35816641	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g33970	expressed protein	gene	expressed protein	chr9	20053294	20057236	+	CDS,promoter
3	LOC_Os01g68330	antigen peptide transporter-like 1, chloroplast precursor, putative, expressed	gene	antigen peptide transporter-like 1, chloroplast precursor, putative, expressed	chr1	39702262	39707007	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g40340	EXS family protein, putative, expressed	gene	EXS family protein, putative, expressed	chr12	24942252	24947537	-	CDS
3	LOC_Os02g35870	galactosyltransferase, putative, expressed	gene	galactosyltransferase, putative, expressed	chr2	21543948	21549151	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g50370	dnaJ domain containing protein, expressed	gene	dnaJ domain containing protein, expressed	chr5	28801407	28808457	+	CDS,downstream
3	LOC_Os02g52250	SKIP/SNW domain containing protein, expressed	gene	SKIP/SNW domain containing protein, expressed	chr2	31989349	31991828	-	three_prime_UTR
3	LOC_Os07g32890	3'-5' exonuclease, putative, expressed	gene	3'-5' exonuclease, putative, expressed	chr7	19657126	19667113	-	CDS
3	LOC_Os07g07580	ROOT HAIRLESS 1, putative, expressed	gene	ROOT HAIRLESS 1, putative, expressed	chr7	3796311	3799844	+	CDS,three_prime_UTR
3	LOC_Os05g42350	ferredoxin--nitrite reductase, putative, expressed	gene	ferredoxin--nitrite reductase, putative, expressed	chr5	24714778	24719467	-	CDS
3	LOC_Os03g62700	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr3	35473453	35479216	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g04110	coatomer alpha subunit, putative, expressed	gene	coatomer alpha subunit, putative, expressed	chr9	2125232	2131704	-	CDS,three_prime_UTR
3	LOC_Os07g43900	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr7	26244525	26249370	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g24704	acyl-coenzyme A oxidase, putative, expressed	gene	acyl-coenzyme A oxidase, putative, expressed	chr6	14503078	14511951	-	CDS
3	LOC_Os08g28180	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr8	17196596	17200370	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g13340	harpin-induced protein 1 domain containing protein, expressed	gene	harpin-induced protein 1 domain containing protein, expressed	chr1	7436894	7438704	+	CDS,downstream
3	LOC_Os06g45430	cell cycle control protein, putative, expressed	gene	cell cycle control protein, putative, expressed	chr6	27465368	27468867	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g27970	FKBP12-interacting protein of 37 kDa, putative, expressed	gene	FKBP12-interacting protein of 37 kDa, putative, expressed	chr6	15862216	15871706	-	CDS
3	LOC_Os07g36940	eukaryotic translation initiation factor 4G, putative, expressed	gene	eukaryotic translation initiation factor 4G, putative, expressed	chr7	22113968	22122136	+	CDS,three_prime_UTR
3	LOC_Os12g07180	transposon protein, putative, Pong sub-class, expressed	gene	transposon protein, putative, Pong sub-class, expressed	chr12	3524514	3527009	-	CDS,three_prime_UTR
3	LOC_Os04g46750	glycosyl transferase 8 domain containing protein, putative, expressed	gene	glycosyl transferase 8 domain containing protein, putative, expressed	chr4	27534923	27539974	-	CDS,three_prime_UTR
3	LOC_Os05g37890	hypothetical protein	gene	hypothetical protein	chr5	22136885	22137346	-	CDS,promoter,downstream
3	LOC_Os06g39900	agenet domain containing protein, putative, expressed	gene	agenet domain containing protein, putative, expressed	chr6	23720776	23725850	-	CDS,three_prime_UTR
3	LOC_Os01g51220	transport protein particle component, Bet3, domain containing protein, expressed	gene	transport protein particle component, Bet3, domain containing protein, expressed	chr1	29441605	29446099	+	CDS
3	LOC_Os03g07990	acetyltransferase, GNAT family, putative, expressed	gene	acetyltransferase, GNAT family, putative, expressed	chr3	4080580	4084038	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g54920	heat- and acid-stable phosphoprotein, putative, expressed	gene	heat- and acid-stable phosphoprotein, putative, expressed	chr1	31584054	31588091	-	CDS,promoter
3	LOC_Os03g11040	cyclin, putative, expressed	gene	cyclin, putative, expressed	chr3	5676634	5679112	+	CDS,promoter,downstream
3	LOC_Os02g37856	expressed protein	gene	expressed protein	chr2	22866244	22874372	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g47450	OsCttP1 - Putative C-terminal processing peptidase homologue, expressed	gene	OsCttP1 - Putative C-terminal processing peptidase homologue, expressed	chr1	27114618	27120134	+	CDS,three_prime_UTR
3	LOC_Os04g56720	RCC2, putative, expressed	gene	RCC2, putative, expressed	chr4	33637302	33643686	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g21120	nucleoside-triphosphatase, putative, expressed	gene	nucleoside-triphosphatase, putative, expressed	chr3	12020500	12026047	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g60750	ribosomal RNA large subunit methyltransferase J, putative, expressed	gene	ribosomal RNA large subunit methyltransferase J, putative, expressed	chr3	34522046	34524701	+	three_prime_UTR
3	LOC_Os03g24380	glutathione peroxidase domain containing protein, expressed	gene	glutathione peroxidase domain containing protein, expressed	chr3	13877771	13881243	+	CDS,three_prime_UTR
3	LOC_Os12g07300	N-acetyltransferase 10, putative, expressed	gene	N-acetyltransferase 10, putative, expressed	chr12	3590141	3596521	+	CDS,three_prime_UTR
3	LOC_Os10g04780	OsFBX363 - F-box domain containing protein, expressed	gene	OsFBX363 - F-box domain containing protein, expressed	chr10	2295683	2299692	-	three_prime_UTR
3	LOC_Os11g29200	protein transport protein, putative, expressed	gene	protein transport protein, putative, expressed	chr11	16460663	16472036	+	CDS,three_prime_UTR
3	LOC_Os04g14410	expressed protein	gene	expressed protein	chr4	8059923	8067558	-	CDS,three_prime_UTR
3	LOC_Os04g38450	gamma-glutamyltranspeptidase 1 precursor, putative, expressed	gene	gamma-glutamyltranspeptidase 1 precursor, putative, expressed	chr4	22670244	22675891	-	CDS
3	LOC_Os03g03410	serine/threonine-protein kinase, putative, expressed	gene	serine/threonine-protein kinase, putative, expressed	chr3	1456460	1460714	+	CDS,three_prime_UTR
3	LOC_Os05g50660	PX domain containing protein, putative, expressed	gene	PX domain containing protein, putative, expressed	chr5	28975904	28983664	+	CDS,three_prime_UTR,promoter
3	LOC_Os02g33000	glycosyl hydrolases family 17, putative, expressed	gene	glycosyl hydrolases family 17, putative, expressed	chr2	19613375	19617976	+	three_prime_UTR,downstream
3	LOC_Os03g25260	HIT zinc finger domain containing protein, expressed	gene	HIT zinc finger domain containing protein, expressed	chr3	14423318	14426558	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g02500	glutamyl-tRNA amidotransferase, putative	gene	glutamyl-tRNA amidotransferase, putative	chr1	806850	808721	+	CDS,promoter,downstream
3	LOC_Os12g07830	OsAPx5 - Stromal Ascorbate Peroxidase encoding gene 5,8	gene	OsAPx5 - Stromal Ascorbate Peroxidase encoding gene 5,8	chr12	3959511	3963000	-	CDS,three_prime_UTR
3	LOC_Os09g26870	BRCA1 C Terminus domain containing protein, expressed	gene	BRCA1 C Terminus domain containing protein, expressed	chr9	16324946	16328925	+	CDS,downstream
3	LOC_Os01g08770	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr1	4396652	4401081	+	CDS
3	LOC_Os02g47020	phosphoribulokinase/Uridine kinase family protein, expressed	gene	phosphoribulokinase/Uridine kinase family protein, expressed	chr2	28695935	28698540	+	three_prime_UTR,promoter,downstream
3	LOC_Os05g27950	DUF538 domain containing protein, putative, expressed	gene	DUF538 domain containing protein, putative, expressed	chr5	16248989	16253030	+	CDS,three_prime_UTR
3	LOC_Os09g27970	expressed protein	gene	expressed protein	chr9	16990404	16995016	-	three_prime_UTR
3	LOC_Os07g09400	RNA ligase isoform 1, putative, expressed	gene	RNA ligase isoform 1, putative, expressed	chr7	4948774	4962399	+	CDS
3	LOC_Os04g27950	expressed protein	gene	expressed protein	chr4	16323031	16325797	+	five_prime_UTR
3	LOC_Os12g02490	expressed protein	gene	expressed protein	chr12	843198	847289	-	CDS,three_prime_UTR
3	LOC_Os02g48880	chloride transporter, chloride channel family, putative, expressed	gene	chloride transporter, chloride channel family, putative, expressed	chr2	29893379	29898211	-	CDS,three_prime_UTR
3	LOC_Os04g32930	DNA cross-link repair 1A protein, putative, expressed	gene	DNA cross-link repair 1A protein, putative, expressed	chr4	19721420	19724747	-	CDS
3	LOC_Os09g11890	expressed protein	gene	expressed protein	chr9	6672037	6677975	+	three_prime_UTR
3	LOC_Os04g41450	TGF-beta receptor, type I/II extracellular region, putative, expressed	gene	TGF-beta receptor, type I/II extracellular region, putative, expressed	chr4	24375848	24381318	-	CDS,downstream
3	LOC_Os04g53310	soluble starch synthase 3, chloroplast precursor, putative, expressed	gene	soluble starch synthase 3, chloroplast precursor, putative, expressed	chr4	31565847	31574474	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g07630	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	gene	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	chr1	3666439	3672065	-	CDS
3	LOC_Os03g54160	OsMADS14 - MADS-box family gene with MIKCc type-box, expressed	gene	OsMADS14 - MADS-box family gene with MIKCc type-box, expressed	chr3	31024033	31034456	-	three_prime_UTR,promoter
3	LOC_Os11g46210	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr11	27513083	27517520	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g01780	F-box/LRR-repeat protein 3, putative, expressed	gene	F-box/LRR-repeat protein 3, putative, expressed	chr11	416567	420229	+	CDS,three_prime_UTR
3	LOC_Os02g10590	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	chr2	5567952	5569801	-	CDS,three_prime_UTR
3	LOC_Os02g01070	FG-GAP repeat-containing protein, putative, expressed	gene	FG-GAP repeat-containing protein, putative, expressed	chr2	34262	41100	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g11524	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr4	6301663	6304947	+	CDS
3	LOC_Os11g36070	expressed protein	gene	expressed protein	chr11	20735593	20741205	+	CDS,three_prime_UTR
3	LOC_Os07g25410	peptidase, M24 family protein, putative, expressed	gene	peptidase, M24 family protein, putative, expressed	chr7	14519338	14523576	-	CDS
3	LOC_Os03g50100	expressed protein	gene	expressed protein	chr3	28565835	28570170	-	CDS,three_prime_UTR
3	LOC_Os05g07210	metal cation transporter, putative, expressed	gene	metal cation transporter, putative, expressed	chr5	3807951	3810783	-	CDS
3	LOC_Os01g70410	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr1	40785123	40789569	-	CDS,three_prime_UTR
3	LOC_Os09g21796	OsFBX327 - F-box domain containing protein, expressed	gene	OsFBX327 - F-box domain containing protein, expressed	chr9	13207108	13208474	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os05g06500	universal stress protein domain containing protein, putative, expressed	gene	universal stress protein domain containing protein, putative, expressed	chr5	3345073	3347248	-	three_prime_UTR,promoter,downstream
3	LOC_Os03g04470	expressed protein	gene	expressed protein	chr3	2072414	2074025	+	three_prime_UTR,promoter,downstream
3	LOC_Os09g01290	hhH-GPD superfamily base excision DNA repair protein, putative, expressed	gene	hhH-GPD superfamily base excision DNA repair protein, putative, expressed	chr9	243491	247908	-	CDS,three_prime_UTR
3	LOC_Os06g13010	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr6	7124667	7126893	+	three_prime_UTR,downstream
3	LOC_Os08g16840	OsFBL45 - F-box domain and LRR containing protein, expressed	gene	OsFBL45 - F-box domain and LRR containing protein, expressed	chr8	10295776	10299735	-	CDS
3	LOC_Os04g03990	3-5 exonuclease domain-containing protein, putative, expressed	gene	3-5 exonuclease domain-containing protein, putative, expressed	chr4	1831057	1835198	-	three_prime_UTR
3	LOC_Os04g47260	expressed protein	gene	expressed protein	chr4	27879858	27881842	+	three_prime_UTR,downstream
3	LOC_Os10g35250	vacuolar protein-sorting protein bro1, putative, expressed	gene	vacuolar protein-sorting protein bro1, putative, expressed	chr10	18766286	18771760	-	CDS,downstream
3	LOC_Os12g40480	H-BTB9 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed	gene	H-BTB9 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed	chr12	25011653	25015051	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g02510	ribosomal protein L13, putative, expressed	gene	ribosomal protein L13, putative, expressed	chr6	866365	868825	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g05780	transporter-related, putative, expressed	gene	transporter-related, putative, expressed	chr12	2660960	2665741	-	CDS,three_prime_UTR
3	LOC_Os06g50350	expressed protein	gene	expressed protein	chr6	30478412	30479800	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os03g02410	GHMP kinases ATP-binding protein, putative, expressed	gene	GHMP kinases ATP-binding protein, putative, expressed	chr3	851257	856158	-	CDS,three_prime_UTR,downstream
3	LOC_Os02g03090	expressed protein	gene	expressed protein	chr2	1223211	1226876	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g34570	exosome complex exonuclease, putative, expressed	gene	exosome complex exonuclease, putative, expressed	chr2	20722404	20725780	-	CDS
3	LOC_Os01g57550	nodulation protein-related, putative, expressed	gene	nodulation protein-related, putative, expressed	chr1	33243660	33247364	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g40480	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr7	24251929	24257024	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g17480	MLA12, putative	gene	MLA12, putative	chr12	10007910	10011703	-	CDS,downstream
3	LOC_Os08g02120	kinase, pfkB family, putative, expressed	gene	kinase, pfkB family, putative, expressed	chr8	700246	703015	+	three_prime_UTR,downstream
3	LOC_Os12g24170	beta-galactosidase precursor, putative, expressed	gene	beta-galactosidase precursor, putative, expressed	chr12	13758872	13779716	-	CDS,three_prime_UTR
3	LOC_Os02g42700	thioredoxin, putative, expressed	gene	thioredoxin, putative, expressed	chr2	25673843	25677732	-	CDS
3	LOC_Os09g31370	expressed protein	gene	expressed protein	chr9	18851327	18854646	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g47860	expressed protein	gene	expressed protein	chr6	28961561	28964942	+	CDS,three_prime_UTR
3	LOC_Os09g32220	pob, putative, expressed	gene	pob, putative, expressed	chr9	19234783	19238306	+	CDS
3	LOC_Os12g05000	expressed protein	gene	expressed protein	chr12	2170590	2173958	+	CDS,three_prime_UTR
3	LOC_Os02g51760	expressed protein	gene	expressed protein	chr2	31698299	31701526	+	CDS
3	LOC_Os06g21710	retrotransposon protein, putative, Ty3-gypsy subclass, expressed	gene	retrotransposon protein, putative, Ty3-gypsy subclass, expressed	chr6	12548752	12552502	-	CDS
3	LOC_Os01g68610	pentatricopeptide repeat protein PPR1106-17, putative, expressed	gene	pentatricopeptide repeat protein PPR1106-17, putative, expressed	chr1	39848602	39850383	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g07480	plant protein of unknown function DUF869 domain containing protein, expressed	gene	plant protein of unknown function DUF869 domain containing protein, expressed	chr10	3978105	3982432	+	CDS,three_prime_UTR
3	LOC_Os10g40640	glycosyl transferase 8 domain containing protein, putative, expressed	gene	glycosyl transferase 8 domain containing protein, putative, expressed	chr10	21727396	21731462	+	CDS,three_prime_UTR
3	LOC_Os02g13560	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr2	7273033	7278272	+	CDS,downstream
3	LOC_Os07g12320	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr7	6948939	6951175	+	three_prime_UTR,downstream
3	LOC_Os07g46370	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr7	27654963	27664885	+	CDS,three_prime_UTR
3	LOC_Os07g18510	OsFBLD5 - F-box, LRR and FBD domain containing protein, expressed	gene	OsFBLD5 - F-box, LRR and FBD domain containing protein, expressed	chr7	10952976	10954891	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g42910	expressed protein	gene	expressed protein	chr2	25800084	25807696	-	CDS
3	LOC_Os12g01680	macrophage migration inhibitory factor, putative	gene	macrophage migration inhibitory factor, putative	chr12	410252	412211	+	three_prime_UTR,downstream
3	LOC_Os05g37910	phosphatidic acid phosphatase-related, putative, expressed	gene	phosphatidic acid phosphatase-related, putative, expressed	chr5	22152010	22157058	-	CDS
3	LOC_Os04g21650	expressed protein	gene	expressed protein	chr4	12233637	12241986	+	three_prime_UTR,downstream
3	LOC_Os09g37620	flavin-containing monooxygenase family protein, putative, expressed	gene	flavin-containing monooxygenase family protein, putative, expressed	chr9	21685567	21688286	-	three_prime_UTR,promoter
3	LOC_Os03g50440	ubiquitin-conjugating enzyme, putative, expressed	gene	ubiquitin-conjugating enzyme, putative, expressed	chr3	28774514	28779868	+	CDS,three_prime_UTR
3	LOC_Os06g09570	nucleolar GTP-binding protein 1, putative, expressed	gene	nucleolar GTP-binding protein 1, putative, expressed	chr6	4869861	4873712	-	CDS,three_prime_UTR
3	LOC_Os08g31810	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr8	19718494	19723283	-	CDS
3	LOC_Os01g72960	expressed protein	gene	expressed protein	chr1	42314220	42316635	+	CDS,three_prime_UTR
3	LOC_Os03g37010	glycosyltransferase, putative, expressed	gene	glycosyltransferase, putative, expressed	chr3	20513950	20517749	-	CDS,three_prime_UTR
3	LOC_Os02g57690	kelch repeat protein, putative, expressed	gene	kelch repeat protein, putative, expressed	chr2	35319742	35326051	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g03170	expressed protein	gene	expressed protein	chr12	1210834	1211679	+	three_prime_UTR,downstream
3	LOC_Os06g49010	OsSPL12 - SBP-box gene family member, expressed	gene	OsSPL12 - SBP-box gene family member, expressed	chr6	29702532	29707689	-	CDS
3	LOC_Os05g33290	uncharacterized conserved membrane protein specific to cyanobacteria, putative, expressed	gene	uncharacterized conserved membrane protein specific to cyanobacteria, putative, expressed	chr5	19447457	19451646	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g07260	glutamine-dependent NAD, putative, expressed	gene	glutamine-dependent NAD, putative, expressed	chr7	3599678	3609797	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g38290	expressed protein	gene	expressed protein	chr4	22599620	22606210	-	CDS
3	LOC_Os01g43170	polypyrimidine tract-binding protein, putative, expressed	gene	polypyrimidine tract-binding protein, putative, expressed	chr1	24632700	24638232	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g43510	40S ribosomal protein S9, putative, expressed	gene	40S ribosomal protein S9, putative, expressed	chr7	26035094	26038323	-	CDS,three_prime_UTR,downstream
3	LOC_Os07g03025	expressed protein	gene	expressed protein	chr7	1139062	1141002	-	five_prime_UTR,downstream
3	LOC_Os06g03770	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr6	1491884	1501598	-	CDS
3	LOC_Os05g34680	expressed protein	gene	expressed protein	chr5	20518483	20520599	-	three_prime_UTR,promoter
3	LOC_Os08g01640	Rf1, mitochondrial precursor, putative, expressed	gene	Rf1, mitochondrial precursor, putative, expressed	chr8	373091	375752	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g45310	ER lumen protein retaining receptor, putative, expressed	gene	ER lumen protein retaining receptor, putative, expressed	chr5	26226271	26229353	-	CDS,three_prime_UTR,downstream
3	LOC_Os10g39520	MLO domain containing protein, putative, expressed	gene	MLO domain containing protein, putative, expressed	chr10	21037936	21042627	-	CDS,promoter
3	LOC_Os01g26174	OsWAK5 - OsWAK receptor-like protein kinase, expressed	gene	OsWAK5 - OsWAK receptor-like protein kinase, expressed	chr1	14824118	14827241	+	CDS,promoter
3	LOC_Os01g53450	aminotransferase, classes I and II, domain containing protein, expressed	gene	aminotransferase, classes I and II, domain containing protein, expressed	chr1	30711113	30716644	+	CDS,downstream
3	LOC_Os02g46750	expressed protein	gene	expressed protein	chr2	28542482	28546015	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g05180	expressed protein	gene	expressed protein	chr11	2274578	2277474	+	five_prime_UTR,three_prime_UTR
3	LOC_Os07g19190	ribosomal protein L24, putative, expressed	gene	ribosomal protein L24, putative, expressed	chr7	11358291	11361418	+	CDS,three_prime_UTR
3	LOC_Os05g03460	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr5	1461346	1463764	+	CDS,downstream
3	LOC_Os04g40880	nucleotide-binding protein 1, putative, expressed	gene	nucleotide-binding protein 1, putative, expressed	chr4	24082746	24085030	-	three_prime_UTR,promoter
3	LOC_Os02g13150	pollen-specific protein SF21, putative, expressed	gene	pollen-specific protein SF21, putative, expressed	chr2	7006064	7010651	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g03570	RGH1A, putative, expressed	gene	RGH1A, putative, expressed	chr10	1539540	1545380	-	CDS,downstream
3	LOC_Os01g03914	cation efflux family protein, putative, expressed	gene	cation efflux family protein, putative, expressed	chr1	1672010	1679632	-	CDS
3	LOC_Os09g39390	oxidoreductase, aldo/keto reductase family protein, putative, expressed	gene	oxidoreductase, aldo/keto reductase family protein, putative, expressed	chr9	22648606	22651604	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g61380	lactate/malate dehydrogenase, putative, expressed	gene	lactate/malate dehydrogenase, putative, expressed	chr1	35497974	35500722	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g50300	CASP, putative, expressed	gene	CASP, putative, expressed	chr3	28664349	28672103	+	CDS
3	LOC_Os04g57590	DJ-1 family protein, putative, expressed	gene	DJ-1 family protein, putative, expressed	chr4	34082628	34085742	-	CDS,three_prime_UTR
3	LOC_Os04g49520	pentatricopeptide repeat protein PPR868-14, putative, expressed	gene	pentatricopeptide repeat protein PPR868-14, putative, expressed	chr4	29349752	29353406	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g17470	RNA-binding protein-related, putative, expressed	gene	RNA-binding protein-related, putative, expressed	chr2	10051103	10056495	+	CDS,three_prime_UTR,five_prime_UTR
3	LOC_Os11g13810	non-lysosomal glucosylceramidase, putative, expressed	gene	non-lysosomal glucosylceramidase, putative, expressed	chr11	7591019	7602615	+	CDS,three_prime_UTR
3	LOC_Os03g22350	Brix domain containing protein, putative, expressed	gene	Brix domain containing protein, putative, expressed	chr3	12800859	12803872	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g11130	conserved hypothetical protein	gene	conserved hypothetical protein	chr3	5728595	5732497	+	CDS,promoter
3	LOC_Os09g32270	expressed protein	gene	expressed protein	chr9	19259837	19265264	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os02g45920	expressed protein	gene	expressed protein	chr2	27979068	27983487	+	CDS
3	LOC_Os10g26130	phenylalanyl-tRNA synthetase, putative, expressed	gene	phenylalanyl-tRNA synthetase, putative, expressed	chr10	13466315	13471233	-	CDS,three_prime_UTR
3	LOC_Os04g47190	aminotransferase domain containing protein, putative, expressed	gene	aminotransferase domain containing protein, putative, expressed	chr4	27841315	27845423	-	CDS,three_prime_UTR
3	LOC_Os07g32430	pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16, putative, expressed	gene	pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16, putative, expressed	chr7	19289890	19298101	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g45650	peptidase, putative, expressed	gene	peptidase, putative, expressed	chr2	27758690	27764916	+	CDS,downstream
3	LOC_Os08g44400	glutathione S-transferase, N-terminal domain containing protein, expressed	gene	glutathione S-transferase, N-terminal domain containing protein, expressed	chr8	27935497	27938447	+	CDS,three_prime_UTR
3	LOC_Os05g23740	DnaK family protein, putative, expressed	gene	DnaK family protein, putative, expressed	chr5	13564323	13569714	+	CDS
3	LOC_Os01g60309	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr1	34887270	34891764	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g02640	expressed protein	gene	expressed protein	chr11	844154	847344	-	CDS,three_prime_UTR
3	LOC_Os02g21230	F-box domain containing protein, expressed	gene	F-box domain containing protein, expressed	chr2	12594757	12596683	+	three_prime_UTR,downstream
3	LOC_Os03g22330	blue-light photoreceptor PHR2, putative, expressed	gene	blue-light photoreceptor PHR2, putative, expressed	chr3	12793222	12796662	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g11520	expressed protein	gene	expressed protein	chr3	5966188	5972722	+	CDS,three_prime_UTR
3	LOC_Os05g35980	expressed protein	gene	expressed protein	chr5	21253271	21257901	-	three_prime_UTR
3	LOC_Os01g72000	armadillo repeat-containing protein, putative, expressed	gene	armadillo repeat-containing protein, putative, expressed	chr1	41721381	41725209	-	CDS,three_prime_UTR
3	LOC_Os06g08730	expressed protein	gene	expressed protein	chr6	4361698	4369854	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g34640	pyruvate Pi dikinase regulatory protein, putative, expressed	gene	pyruvate Pi dikinase regulatory protein, putative, expressed	chr7	20763659	20768592	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g12880	VHS and GAT domain containing protein, expressed	gene	VHS and GAT domain containing protein, expressed	chr1	7128149	7136330	+	CDS
3	LOC_Os05g34670	KH domain containing protein, putative, expressed	gene	KH domain containing protein, putative, expressed	chr5	20506360	20511108	-	CDS
3	LOC_Os01g32964	protein phosphotase protein, putative, expressed	gene	protein phosphotase protein, putative, expressed	chr1	18086555	18094140	-	CDS,three_prime_UTR
3	LOC_Os01g63280	tyrosine protein kinase domain containing protein, putative, expressed	gene	tyrosine protein kinase domain containing protein, putative, expressed	chr1	36682666	36686111	-	five_prime_UTR,downstream
3	LOC_Os07g15490	C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed	gene	C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed	chr7	8988130	8991858	+	CDS,downstream
3	LOC_Os01g25386	multidrug resistance-associated protein, putative, expressed	gene	multidrug resistance-associated protein, putative, expressed	chr1	14339107	14356423	-	CDS
3	LOC_Os07g32450	protein kinase PKN/PRK1, effector, putative, expressed	gene	protein kinase PKN/PRK1, effector, putative, expressed	chr7	19303792	19308490	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g02720	expressed protein	gene	expressed protein	chr3	1020456	1023670	+	three_prime_UTR,downstream
3	LOC_Os07g02710	expressed protein	gene	expressed protein	chr7	977442	980851	+	CDS
3	LOC_Os05g12300	expressed protein	gene	expressed protein	chr5	7061933	7066094	+	three_prime_UTR
3	LOC_Os02g51790	ribosomal protein L29, putative, expressed	gene	ribosomal protein L29, putative, expressed	chr2	31713852	31716630	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g22494	expressed protein	gene	expressed protein	chr7	12651923	12655462	-	three_prime_UTR
3	LOC_Os04g53240	autophagy-related protein, putative, expressed	gene	autophagy-related protein, putative, expressed	chr4	31531261	31534066	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g34050	phosphofructokinase, putative	gene	phosphofructokinase, putative	chr8	21322256	21326036	-	CDS,promoter
3	LOC_Os11g14300	la domain containing protein, expressed	gene	la domain containing protein, expressed	chr11	8014101	8022418	-	CDS
3	LOC_Os03g21460	metallo-beta-lactamase family protein, putative, expressed	gene	metallo-beta-lactamase family protein, putative, expressed	chr3	12262167	12265201	-	CDS,three_prime_UTR
3	LOC_Os06g42060	expressed protein	gene	expressed protein	chr6	25267635	25269620	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g49410	uncharacterized ACR, YagE family COG1723 containing protein, expressed	gene	uncharacterized ACR, YagE family COG1723 containing protein, expressed	chr7	29588764	29592820	-	CDS,three_prime_UTR
3	LOC_Os11g06760	protein of unknown function domain containing protein, expressed	gene	protein of unknown function domain containing protein, expressed	chr11	3293833	3299239	+	five_prime_UTR,CDS
3	LOC_Os12g17910	T-complex protein, putative, expressed	gene	T-complex protein, putative, expressed	chr12	10290980	10295325	+	CDS,three_prime_UTR
3	LOC_Os01g50690	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr1	29108891	29118317	+	CDS
3	LOC_Os12g08740	exonuclease, putative, expressed	gene	exonuclease, putative, expressed	chr12	4468455	4474419	+	CDS,three_prime_UTR
3	LOC_Os12g03400	expressed protein	gene	expressed protein	chr12	1316605	1318925	+	CDS,three_prime_UTR
3	LOC_Os01g48390	expressed protein	gene	expressed protein	chr1	27732365	27738800	+	CDS
3	LOC_Os05g33040	cyclin, putative, expressed	gene	cyclin, putative, expressed	chr5	19301116	19304360	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g39710	NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor, putative, expressed	gene	NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor, putative, expressed	chr7	23796960	23801662	-	CDS
3	LOC_Os11g13850	rieske domain containing protein, expressed	gene	rieske domain containing protein, expressed	chr11	7635181	7638729	-	CDS,three_prime_UTR
3	LOC_Os03g11580	expressed protein	gene	expressed protein	chr3	6005673	6010719	-	CDS,three_prime_UTR,downstream
3	LOC_Os10g17770	chromo domain-containing protein LHP1, putative, expressed	gene	chromo domain-containing protein LHP1, putative, expressed	chr10	8921155	8925965	+	CDS,three_prime_UTR
3	LOC_Os03g41419	serpin domain containing protein, putative, expressed	gene	serpin domain containing protein, putative, expressed	chr3	23046710	23051987	+	CDS
3	LOC_Os03g09180	trpH, putative, expressed	gene	trpH, putative, expressed	chr3	4785020	4788367	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g06580	formin, putative, expressed	gene	formin, putative, expressed	chr2	3291233	3295478	+	CDS,three_prime_UTR
3	LOC_Os09g12730	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr9	7292011	7299555	-	three_prime_UTR,promoter
3	LOC_Os06g31220	mitogen-activated protein kinase 17, putative, expressed	gene	mitogen-activated protein kinase 17, putative, expressed	chr6	18157737	18164299	-	three_prime_UTR
3	LOC_Os03g21830	appr-1-p processing enzyme family protein, putative, expressed	gene	appr-1-p processing enzyme family protein, putative, expressed	chr3	12476735	12478853	+	three_prime_UTR,downstream
3	LOC_Os11g34910	expressed protein	gene	expressed protein	chr11	19989256	19994245	-	three_prime_UTR
3	LOC_Os04g28090	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr4	16407910	16415223	+	CDS,three_prime_UTR
3	LOC_Os11g34140	expressed protein	gene	expressed protein	chr11	19522352	19524981	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os10g11870	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr10	6597856	6605547	-	CDS,promoter
3	LOC_Os03g62490	prohibitin-2, putative, expressed	gene	prohibitin-2, putative, expressed	chr3	35375558	35378061	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g45910	plastidic ATP/ADP-transporter, putative, expressed	gene	plastidic ATP/ADP-transporter, putative, expressed	chr1	26076984	26081154	-	CDS,three_prime_UTR
3	LOC_Os09g32710	expressed protein	gene	expressed protein	chr9	19508826	19512264	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g12600	OsFBX226 - F-box domain containing protein, expressed	gene	OsFBX226 - F-box domain containing protein, expressed	chr7	7197126	7200917	-	CDS,three_prime_UTR
3	LOC_Os05g46270	FEN1A - Putative flap endonuclease protein, expressed	gene	FEN1A - Putative flap endonuclease protein, expressed	chr5	26767528	26771558	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os09g12710	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr9	7270228	7275920	+	CDS
3	LOC_Os01g23380	stripe rust resistance protein Yr10, putative, expressed	gene	stripe rust resistance protein Yr10, putative, expressed	chr1	13140906	13143915	-	CDS
3	LOC_Os03g03400	diacylglycerol kinase, putative, expressed	gene	diacylglycerol kinase, putative, expressed	chr3	1448061	1451021	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g02030	folylpolyglutamate synthase, mitochondrial precursor, putative, expressed	gene	folylpolyglutamate synthase, mitochondrial precursor, putative, expressed	chr3	639595	644673	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g47380	coiled-coil domain-containing protein 139, putative, expressed	gene	coiled-coil domain-containing protein 139, putative, expressed	chr4	27932843	27937510	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g66940	kinase, pfkB family, putative, expressed	gene	kinase, pfkB family, putative, expressed	chr1	38883698	38886680	-	three_prime_UTR
3	LOC_Os12g42884	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative, expressed	gene	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative, expressed	chr12	26623587	26629389	+	CDS,three_prime_UTR
3	LOC_Os01g54010	peptidase, putative, expressed	gene	peptidase, putative, expressed	chr1	31064077	31069104	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g17760	expressed protein	gene	expressed protein	chr9	10855522	10861760	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g38980	T-complex protein, putative, expressed	gene	T-complex protein, putative, expressed	chr9	22382443	22386560	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g04940	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr3	2379022	2383648	-	CDS
3	LOC_Os08g07430	expressed protein	gene	expressed protein	chr8	4171149	4174559	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g24910	expressed protein	gene	expressed protein	chr6	14601719	14604946	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g42620	zinc finger DHHC domain-containing protein, putative, expressed	gene	zinc finger DHHC domain-containing protein, putative, expressed	chr8	26936062	26939455	-	CDS
3	LOC_Os10g36350	MSP domain containing protein, putative, expressed	gene	MSP domain containing protein, putative, expressed	chr10	19344115	19347295	-	CDS,promoter
3	LOC_Os03g40700	presenilin, putative, expressed	gene	presenilin, putative, expressed	chr3	22627283	22628832	+	three_prime_UTR,promoter,downstream
3	LOC_Os01g55360	phosphatidate cytidylyltransferase, putative, expressed	gene	phosphatidate cytidylyltransferase, putative, expressed	chr1	31869888	31876563	-	CDS,three_prime_UTR
3	LOC_Os05g29090	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr5	17019850	17023427	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g57160	 ELMO/CED-12 family protein, putative, expressed	gene	 ELMO/CED-12 family protein, putative, expressed	chr2	34999045	35003669	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os09g01640	CAX-interacting protein 4, putative, expressed	gene	CAX-interacting protein 4, putative, expressed	chr9	455236	456840	+	three_prime_UTR,downstream
3	LOC_Os06g22820	cyclin-dependent kinase F-1, putative, expressed	gene	cyclin-dependent kinase F-1, putative, expressed	chr6	13301547	13305575	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g02330	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr8	891846	898108	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g74350	soluble inorganic pyrophosphatase, putative, expressed	gene	soluble inorganic pyrophosphatase, putative, expressed	chr1	43071704	43075497	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g48760	protein of unknown function DUF1421 domain containing protein, expressed	gene	protein of unknown function DUF1421 domain containing protein, expressed	chr5	27881370	27885360	+	CDS,three_prime_UTR
3	LOC_Os10g20600	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr10	10311690	10317107	+	CDS,three_prime_UTR
3	LOC_Os12g36180	auxilin, putative, expressed	gene	auxilin, putative, expressed	chr12	22139829	22147048	-	CDS,three_prime_UTR
3	LOC_Os01g32800	proteasome subunit, putative, expressed	gene	proteasome subunit, putative, expressed	chr1	17998253	18001832	-	CDS
3	LOC_Os02g35760	STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed	gene	STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed	chr2	21468864	21471763	-	three_prime_UTR,promoter
3	LOC_Os04g14654	Sec1 family transport protein, putative, expressed	gene	Sec1 family transport protein, putative, expressed	chr4	8211787	8228558	-	CDS
3	LOC_Os08g42450	annexin A7, putative, expressed	gene	annexin A7, putative, expressed	chr8	26817299	26819453	+	CDS,three_prime_UTR
3	LOC_Os04g37960	synaptonemal complex protein 2, putative, expressed	gene	synaptonemal complex protein 2, putative, expressed	chr4	22398339	22407816	+	CDS
3	LOC_Os03g34310	expressed protein	gene	expressed protein	chr3	19526546	19530225	+	three_prime_UTR
3	LOC_Os09g35960	TBC domain containing protein, expressed	gene	TBC domain containing protein, expressed	chr9	20715932	20720655	-	CDS,three_prime_UTR
3	LOC_Os08g44510	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY, putative, expressed	gene	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY, putative, expressed	chr8	27988842	27996711	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g60920	Methyltransferase small domain containing protein, expressed	gene	Methyltransferase small domain containing protein, expressed	chr3	34607441	34609845	+	three_prime_UTR
3	LOC_Os03g15880	coronatine-insensitive protein, putative, expressed	gene	coronatine-insensitive protein, putative, expressed	chr3	8760436	8765947	+	three_prime_UTR,downstream
3	LOC_Os01g67570	PDE312/PTAC10, putative, expressed	gene	PDE312/PTAC10, putative, expressed	chr1	39269489	39273953	-	CDS
3	LOC_Os03g25400	kinase, putative, expressed	gene	kinase, putative, expressed	chr3	14524854	14529539	+	CDS,three_prime_UTR
3	LOC_Os07g46440	ribosomal protein, putative, expressed	gene	ribosomal protein, putative, expressed	chr7	27705366	27708962	-	three_prime_UTR,promoter
3	LOC_Os03g58700	vacuolar protein sorting-associated protein 35, putative, expressed	gene	vacuolar protein sorting-associated protein 35, putative, expressed	chr3	33417776	33425958	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g53670	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr2	32821972	32826905	+	CDS,downstream
3	LOC_Os08g37490	14-3-3 protein, putative, expressed	gene	14-3-3 protein, putative, expressed	chr8	23747618	23749865	+	three_prime_UTR,downstream
3	LOC_Os03g51380	expressed protein	gene	expressed protein	chr3	29390634	29394446	+	CDS
3	LOC_Os01g09890	translation initiation factor SUI1, putative, expressed	gene	translation initiation factor SUI1, putative, expressed	chr1	5137463	5139925	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g54130	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr2	33163974	33169743	-	five_prime_UTR,three_prime_UTR,CDS
3	LOC_Os02g10130	tubulin binding cofactor C, putative, expressed	gene	tubulin binding cofactor C, putative, expressed	chr2	5297643	5306435	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g56000	26S protease regulatory subunit 6A, putative, expressed	gene	26S protease regulatory subunit 6A, putative, expressed	chr2	34260095	34264066	-	CDS,three_prime_UTR
3	LOC_Os06g49629	unknown	gene	unknown	chr6	30032716	30032851	+	CDS,promoter,downstream
3	LOC_Os03g37130	ATPAP18/PAP18, putative, expressed	gene	ATPAP18/PAP18, putative, expressed	chr3	20572752	20577898	-	CDS
3	LOC_Os09g39700	expressed protein	gene	expressed protein	chr9	22778277	22783254	+	CDS,three_prime_UTR,promoter
3	LOC_Os10g19334	alpha-1,2-fucosidase, putative, expressed	gene	alpha-1,2-fucosidase, putative, expressed	chr10	9789965	9796853	-	five_prime_UTR,CDS
3	LOC_Os02g50350	dihydroorotate dihydrogenase protein, putative, expressed	gene	dihydroorotate dihydrogenase protein, putative, expressed	chr2	30739467	30743502	-	CDS,downstream
3	LOC_Os11g07060	receptor protein kinase CLAVATA1 precursor, putative, expressed	gene	receptor protein kinase CLAVATA1 precursor, putative, expressed	chr11	3512916	3518114	+	CDS
3	LOC_Os06g50910	Phosphatidylinositol kinase and FAT containing domain protein, putative, expressed	gene	Phosphatidylinositol kinase and FAT containing domain protein, putative, expressed	chr6	30796114	30814785	-	CDS,three_prime_UTR
3	LOC_Os12g37550	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr12	23008571	23011527	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g02730	tRNA-dihydrouridine synthase 3-like, putative, expressed	gene	tRNA-dihydrouridine synthase 3-like, putative, expressed	chr4	1042454	1049555	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g21020	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr3	11923186	11928435	-	CDS,three_prime_UTR
3	LOC_Os04g50060	GRAS family transcription factor domain containing protein, expressed	gene	GRAS family transcription factor domain containing protein, expressed	chr4	29672408	29675429	+	CDS
3	LOC_Os02g54780	CYPRO4, putative, expressed	gene	CYPRO4, putative, expressed	chr2	33541425	33544576	+	CDS,three_prime_UTR
3	LOC_Os06g49880	B-box zinc finger family protein, putative, expressed	gene	B-box zinc finger family protein, putative, expressed	chr6	30195099	30196607	+	three_prime_UTR
3	LOC_Os02g40450	DEAD/DEAH box helicase domain containing protein, expressed	gene	DEAD/DEAH box helicase domain containing protein, expressed	chr2	24512358	24521364	+	CDS,downstream
3	LOC_Os11g42540	oxidoreductase, aldo/keto reductase family protein, putative, expressed	gene	oxidoreductase, aldo/keto reductase family protein, putative, expressed	chr11	25148345	25151223	+	CDS
3	LOC_Os06g40200	calcium-binding mitochondrial carrier CBG00135, putative, expressed	gene	calcium-binding mitochondrial carrier CBG00135, putative, expressed	chr6	23934978	23941396	+	three_prime_UTR
3	LOC_Os07g06610	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	gene	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	chr7	3206123	3213060	+	CDS,three_prime_UTR
3	LOC_Os01g33420	glycosyl hydrolase family protein 27, putative, expressed	gene	glycosyl hydrolase family protein 27, putative, expressed	chr1	18393196	18400653	-	CDS
3	LOC_Os05g50910	extra-large G-protein-related, putative, expressed	gene	extra-large G-protein-related, putative, expressed	chr5	29150911	29157589	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g35620	expressed protein	gene	expressed protein	chr12	21621490	21625751	+	CDS,three_prime_UTR
3	LOC_Os07g09000	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr7	4681481	4686655	+	CDS
3	LOC_Os03g42770	expressed protein	gene	expressed protein	chr3	23815815	23822403	-	CDS,three_prime_UTR
3	LOC_Os11g07440	plant neutral invertase domain containing protein, expressed	gene	plant neutral invertase domain containing protein, expressed	chr11	3735532	3739523	-	CDS
3	LOC_Os12g03340	protein of unknown function, DUF618 domain containing protein, expressed	gene	protein of unknown function, DUF618 domain containing protein, expressed	chr12	1291669	1299969	-	CDS,three_prime_UTR
3	LOC_Os06g22030	AT hook motif domain containing protein, expressed	gene	AT hook motif domain containing protein, expressed	chr6	12757359	12763137	-	CDS
3	LOC_Os12g36920	calmodulin binding protein, putative, expressed	gene	calmodulin binding protein, putative, expressed	chr12	22602273	22606636	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g70570	acyltransferase, putative, expressed	gene	acyltransferase, putative, expressed	chr1	40863865	40867313	-	CDS,three_prime_UTR,downstream
3	LOC_Os12g31350	SSXT protein, putative, expressed	gene	SSXT protein, putative, expressed	chr12	18827072	18832082	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g43560	TKL_IRAK_DUF26-lc.24 - DUF26 kinases have homology to DUF26 containing loci, expressed	gene	TKL_IRAK_DUF26-lc.24 - DUF26 kinases have homology to DUF26 containing loci, expressed	chr7	26051228	26055133	-	CDS
3	LOC_Os06g05670	expressed protein	gene	expressed protein	chr6	2564182	2566639	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g18594	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr9	11386144	11395235	+	CDS,five_prime_UTR
3	LOC_Os09g39870	2-phosphoglycerate kinase-related, putative, expressed	gene	2-phosphoglycerate kinase-related, putative, expressed	chr9	22854836	22858602	+	CDS,three_prime_UTR
3	LOC_Os05g50970	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr5	29181377	29186443	-	CDS,three_prime_UTR
3	LOC_Os01g14790	expressed protein	gene	expressed protein	chr1	8268588	8271646	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os04g43440	NB-ARC/LRR disease resistance protein, putative, expressed	gene	NB-ARC/LRR disease resistance protein, putative, expressed	chr4	25523161	25527409	-	CDS
3	LOC_Os01g36640	disease resistance protein RPM1, putative, expressed	gene	disease resistance protein RPM1, putative, expressed	chr1	20326945	20333788	+	three_prime_UTR,promoter,downstream
3	LOC_Os10g41749	crcB-like protein, expressed	gene	crcB-like protein, expressed	chr10	22395473	22401624	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g04330	expressed protein	gene	expressed protein	chr6	1837558	1841841	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g16470	MLA10, putative, expressed	gene	MLA10, putative, expressed	chr11	9103052	9107353	+	CDS,downstream
3	LOC_Os04g57870	expressed protein	gene	expressed protein	chr4	34271961	34278670	-	CDS,three_prime_UTR
3	LOC_Os09g38750	expressed protein	gene	expressed protein	chr9	22265120	22268377	-	CDS,three_prime_UTR
3	LOC_Os01g42810	leaf senescence related protein, putative, expressed	gene	leaf senescence related protein, putative, expressed	chr1	24363102	24366677	+	three_prime_UTR,downstream
3	LOC_Os08g38620	expressed protein	gene	expressed protein	chr8	24404993	24410104	+	CDS,three_prime_UTR,promoter
3	LOC_Os02g33710	decarboxylase, putative, expressed	gene	decarboxylase, putative, expressed	chr2	20103135	20106588	+	CDS
3	LOC_Os07g44290	CAMK_KIN1/SNF1/Nim1_like.29 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_KIN1/SNF1/Nim1_like.29 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr7	26463182	26467865	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g43500	NBS-LRR type disease resistance protein, putative	gene	NBS-LRR type disease resistance protein, putative	chr11	25788555	25789829	-	CDS,promoter,downstream
3	LOC_Os09g39594	expressed protein	gene	expressed protein	chr9	22727156	22728719	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g02680	hypothetical protein	gene	hypothetical protein	chr12	934256	936422	+	CDS
3	LOC_Os04g47240	STE_MEKK_ste11_MAP3K.17 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	gene	STE_MEKK_ste11_MAP3K.17 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	chr4	27864107	27871972	-	CDS,three_prime_UTR
3	LOC_Os04g23830	exonuclease, putative	gene	exonuclease, putative	chr4	13601732	13606764	-	CDS,promoter
3	LOC_Os02g04480	cleavage and polyadenylation specificity factor, putative, expressed	gene	cleavage and polyadenylation specificity factor, putative, expressed	chr2	1979693	1983630	+	CDS,three_prime_UTR
3	LOC_Os02g26984	expressed protein	gene	expressed protein	chr2	15837028	15850353	+	CDS,three_prime_UTR
3	LOC_Os03g01760	exostosin family domain containing protein, expressed	gene	exostosin family domain containing protein, expressed	chr3	478165	481006	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g24250	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr12	13813000	13827130	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g27003	expressed protein	gene	expressed protein	chr3	15451911	15456259	+	three_prime_UTR,downstream
3	LOC_Os12g03290	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr12	1268561	1273766	-	CDS,promoter
3	LOC_Os03g51610	Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed	gene	Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed	chr3	29529011	29536314	+	CDS
3	LOC_Os12g36750	expressed protein	gene	expressed protein	chr12	22477928	22481346	-	CDS,promoter
3	LOC_Os09g15250	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr9	9263205	9268415	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os07g27320	glycosyl hydrolase family 10 protein, putative, expressed	gene	glycosyl hydrolase family 10 protein, putative, expressed	chr7	15883364	15889039	+	CDS
3	LOC_Os01g47660	60S ribosomal protein L18a, putative, expressed	gene	60S ribosomal protein L18a, putative, expressed	chr1	27265540	27267409	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g61050	FG-GAP repeat-containing protein, putative, expressed	gene	FG-GAP repeat-containing protein, putative, expressed	chr3	34672847	34680951	+	CDS,downstream
3	LOC_Os01g66920	Ser/Thr protein phosphatase family protein, putative, expressed	gene	Ser/Thr protein phosphatase family protein, putative, expressed	chr1	38862977	38866906	+	CDS,three_prime_UTR
3	LOC_Os09g16330	pleiotropic drug resistance protein, putative, expressed	gene	pleiotropic drug resistance protein, putative, expressed	chr9	9969564	9978282	-	CDS
3	LOC_Os02g03760	expressed protein	gene	expressed protein	chr2	1575431	1579232	-	CDS,three_prime_UTR
3	LOC_Os06g37620	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr6	22270190	22274545	-	CDS,promoter
3	LOC_Os04g39660	OsFBDUF22 - F-box and DUF domain containing protein, expressed	gene	OsFBDUF22 - F-box and DUF domain containing protein, expressed	chr4	23444907	23446847	-	three_prime_UTR,promoter
3	LOC_Os03g55570	upstream activation factor subunit spp27, putative, expressed	gene	upstream activation factor subunit spp27, putative, expressed	chr3	31615746	31622998	+	CDS
3	LOC_Os03g08430	SAC domain containing protein, putative, expressed	gene	SAC domain containing protein, putative, expressed	chr3	4326388	4335227	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g15900	50S ribosomal protein L21, chloroplast precursor, putative, expressed	gene	50S ribosomal protein L21, chloroplast precursor, putative, expressed	chr2	9005185	9007484	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g34209	unknown	gene	unknown	chr4	20554616	20555195	-	CDS,promoter,downstream
3	LOC_Os02g42940	MSP domain containing protein, expressed	gene	MSP domain containing protein, expressed	chr2	25822491	25825767	-	CDS,three_prime_UTR
3	LOC_Os08g27850	endothelial differentiation-related factor 1, putative, expressed	gene	endothelial differentiation-related factor 1, putative, expressed	chr8	16979546	16982790	+	CDS,three_prime_UTR
3	LOC_Os11g05930	response regulator receiver domain containing protein, expressed	gene	response regulator receiver domain containing protein, expressed	chr11	2784900	2789639	+	CDS,three_prime_UTR
3	LOC_Os08g06640	stress-induced protein, putative, expressed	gene	stress-induced protein, putative, expressed	chr8	3739164	3744429	+	five_prime_UTR,CDS
3	LOC_Os02g14840	potassium channel KAT1, putative, expressed	gene	potassium channel KAT1, putative, expressed	chr2	8244346	8248443	-	CDS
3	LOC_Os12g41230	tesmin/TSO1-like CXC domain containing protein, expressed	gene	tesmin/TSO1-like CXC domain containing protein, expressed	chr12	25528145	25535447	-	CDS,three_prime_UTR
3	LOC_Os03g59040	squalene synthetase, putative, expressed	gene	squalene synthetase, putative, expressed	chr3	33598142	33605325	+	CDS,downstream
3	LOC_Os01g52550	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr1	30188214	30194414	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g39840	expressed protein	gene	expressed protein	chr12	24594281	24597403	-	CDS,three_prime_UTR
3	LOC_Os03g22570	MIF4G domain containing protein, putative, expressed	gene	MIF4G domain containing protein, putative, expressed	chr3	12974849	12986966	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g08890	glutamate receptor 3.4 precursor, putative, expressed	gene	glutamate receptor 3.4 precursor, putative, expressed	chr6	4471343	4475669	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os05g06510	4Fe-4S binding domain containing protein, expressed	gene	4Fe-4S binding domain containing protein, expressed	chr5	3348786	3352825	-	CDS,three_prime_UTR
3	LOC_Os04g31971	expressed protein	gene	expressed protein	chr4	18976803	18980057	+	five_prime_UTR
3	LOC_Os09g21280	hypothetical protein	gene	hypothetical protein	chr9	12834965	12837614	-	CDS
3	LOC_Os07g23990	tetratricopeptide repeat domain containing protein, putative, expressed	gene	tetratricopeptide repeat domain containing protein, putative, expressed	chr7	13588498	13603630	+	CDS,three_prime_UTR
3	LOC_Os03g07190	expressed protein	gene	expressed protein	chr3	3680096	3682313	+	CDS
3	LOC_Os11g14390	expressed protein	gene	expressed protein	chr11	8078613	8080570	-	three_prime_UTR,promoter
3	LOC_Os09g07830	acetyl-CoA acetyltransferase, cytosolic, putative, expressed	gene	acetyl-CoA acetyltransferase, cytosolic, putative, expressed	chr9	3969052	3974828	+	CDS,three_prime_UTR
3	LOC_Os11g03530	ELMO/CED-12 family protein, putative, expressed	gene	ELMO/CED-12 family protein, putative, expressed	chr11	1359724	1363128	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g21420	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr9	12934735	12943506	-	CDS
3	LOC_Os06g22829	expressed protein	gene	expressed protein	chr6	13313351	13317311	-	three_prime_UTR
3	LOC_Os03g61200	expressed protein	gene	expressed protein	chr3	34748881	34751867	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g32090	expressed protein	gene	expressed protein	chr4	19068418	19074009	-	CDS,promoter
3	LOC_Os05g06280	ATKINESIN-13A/KINESIN-13A, putative, expressed	gene	ATKINESIN-13A/KINESIN-13A, putative, expressed	chr5	3203018	3214092	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g44960	nodulation protein-related, putative, expressed	gene	nodulation protein-related, putative, expressed	chr7	26815008	26818200	+	CDS,downstream
3	LOC_Os05g26990	phospholipid-transporting ATPase 2, putative, expressed	gene	phospholipid-transporting ATPase 2, putative, expressed	chr5	15624097	15631259	-	three_prime_UTR
3	LOC_Os02g39370	tRNA methyltransferase, putative	gene	tRNA methyltransferase, putative	chr2	23755253	23760009	-	CDS
3	LOC_Os03g52730	magnesium-dependent phosphatase 1, putative, expressed	gene	magnesium-dependent phosphatase 1, putative, expressed	chr3	30221260	30223294	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g01060	RNase P subunit p30, putative	gene	RNase P subunit p30, putative	chr12	34977	38954	+	CDS,downstream
3	LOC_Os07g31194	expressed protein	gene	expressed protein	chr7	18463719	18465447	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g53300	polyphenol oxidase, putative, expressed	gene	polyphenol oxidase, putative, expressed	chr4	31563995	31567166	+	three_prime_UTR,downstream
3	LOC_Os12g43590	FAD dependent oxidoreductase domain containing protein, expressed	gene	FAD dependent oxidoreductase domain containing protein, expressed	chr12	27018316	27023371	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g52360	peptidyl-prolyl cis-trans isomerase CYP40, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase CYP40, putative, expressed	chr2	32041897	32046456	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g29760	membrane protein, putative, expressed	gene	membrane protein, putative, expressed	chr8	18289102	18297017	+	CDS
3	LOC_Os03g60200	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr3	34231344	34234517	+	three_prime_UTR,promoter
3	LOC_Os06g13820	dynamin, putative, expressed	gene	dynamin, putative, expressed	chr6	7660692	7669036	+	CDS,three_prime_UTR
3	LOC_Os11g40160	expressed protein	gene	expressed protein	chr11	23480910	23483180	+	three_prime_UTR,promoter,downstream
3	LOC_Os12g06335	expressed protein	gene	expressed protein	chr12	3023384	3028053	+	CDS,downstream
3	LOC_Os11g47800	spo0B-associated GTP-binding protein, putative, expressed	gene	spo0B-associated GTP-binding protein, putative, expressed	chr11	28297544	28301024	+	CDS,three_prime_UTR
3	LOC_Os05g08854	expressed protein	gene	expressed protein	chr5	4886608	4890220	-	CDS,three_prime_UTR
3	LOC_Os07g05040	cadmium-induced protein, putative, expressed	gene	cadmium-induced protein, putative, expressed	chr7	2221929	2223917	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g50860	hydrolase, acting on carbon-nitrogen, putative, expressed	gene	hydrolase, acting on carbon-nitrogen, putative, expressed	chr6	30769704	30772822	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g28290	ranBP1 domain containing protein, expressed	gene	ranBP1 domain containing protein, expressed	chr5	16502227	16505012	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g03720	expressed protein	gene	expressed protein	chr11	1444412	1447909	+	CDS,promoter
3	LOC_Os10g41110	autophagy-related protein 3, putative, expressed	gene	autophagy-related protein 3, putative, expressed	chr10	22008240	22011794	-	three_prime_UTR,promoter
3	LOC_Os04g56654	BSD domain-containing protein, putative, expressed	gene	BSD domain-containing protein, putative, expressed	chr4	33597055	33598966	+	three_prime_UTR,promoter,downstream
3	LOC_Os02g57610	expressed protein	gene	expressed protein	chr2	35274664	35278671	+	CDS,three_prime_UTR
3	LOC_Os03g63300	NLI interacting factor-like phosphatase, putative, expressed	gene	NLI interacting factor-like phosphatase, putative, expressed	chr3	35765491	35770329	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g30530	expressed protein	gene	expressed protein	chr3	17420893	17425570	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g10680	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr4	5797494	5806590	+	CDS,downstream
3	LOC_Os03g29470	transcription initiation factor IID, putative, expressed	gene	transcription initiation factor IID, putative, expressed	chr3	16793108	16798360	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g61690	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr3	34953837	34957232	+	CDS,three_prime_UTR
3	LOC_Os06g06210	expressed protein	gene	expressed protein	chr6	2873351	2876068	+	CDS,three_prime_UTR
3	LOC_Os11g35210	NB-ARC domain containing protein	gene	NB-ARC domain containing protein	chr11	20177305	20181551	+	CDS,promoter
3	LOC_Os03g50290	14-3-3 protein, putative, expressed	gene	14-3-3 protein, putative, expressed	chr3	28656820	28661023	+	CDS,three_prime_UTR
3	LOC_Os03g17560	expressed protein	gene	expressed protein	chr3	9755942	9758267	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g07300	BIG, putative, expressed	gene	BIG, putative, expressed	chr9	3589118	3606830	-	CDS,promoter
3	LOC_Os05g30870	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr5	17862323	17869803	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g07120	DNA-directed RNA polymerase 1B, mitochondrial precursor, putative, expressed	gene	DNA-directed RNA polymerase 1B, mitochondrial precursor, putative, expressed	chr9	3455030	3466826	-	CDS,three_prime_UTR
3	LOC_Os04g38520	CPuORF18 - conserved peptide uORF-containing transcript, expressed	gene	CPuORF18 - conserved peptide uORF-containing transcript, expressed	chr4	22705180	22707629	+	CDS
3	LOC_Os11g29790	receptor kinase, putative	gene	receptor kinase, putative	chr11	16824952	16828140	+	CDS,promoter,downstream
3	LOC_Os05g46395	expressed protein	gene	expressed protein	chr5	26829156	26834188	+	CDS,three_prime_UTR
3	LOC_Os07g28644	expressed protein	gene	expressed protein	chr7	16765304	16768647	+	CDS,three_prime_UTR
3	LOC_Os07g41250	peptide transporter PTR2, putative, expressed	gene	peptide transporter PTR2, putative, expressed	chr7	24719073	24722899	+	CDS,three_prime_UTR
3	LOC_Os03g11030	cyclin, putative	gene	cyclin, putative	chr3	5672158	5675258	+	CDS,promoter,downstream
3	LOC_Os08g37700	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr8	23868481	23873526	-	CDS,three_prime_UTR
3	LOC_Os06g50480	bZIP transcription factor domain containing protein	gene	bZIP transcription factor domain containing protein	chr6	30563133	30566038	+	CDS,downstream
3	LOC_Os03g36830	expressed protein	gene	expressed protein	chr3	20442684	20445782	-	three_prime_UTR
3	LOC_Os01g59620	histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed	gene	histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed	chr1	34479508	34483941	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g16010	BCAS2 protein, putative, expressed	gene	BCAS2 protein, putative, expressed	chr1	9012002	9015711	+	CDS,three_prime_UTR
3	LOC_Os10g30860	nicotiana lesion-inducing like, putative, expressed	gene	nicotiana lesion-inducing like, putative, expressed	chr10	16021545	16025196	+	CDS,downstream
3	LOC_Os08g36020	Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed	gene	Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed	chr8	22699312	22704835	+	CDS,three_prime_UTR
3	LOC_Os05g07000	splicing factor, arginine/serine-rich 7, putative, expressed	gene	splicing factor, arginine/serine-rich 7, putative, expressed	chr5	3673988	3678224	-	CDS,promoter
3	LOC_Os11g03910	zinc finger DHHC domain-containing protein, putative, expressed	gene	zinc finger DHHC domain-containing protein, putative, expressed	chr11	1561203	1564097	+	CDS
3	LOC_Os05g08970	SSRP1-like FACT complex subunit, putative, expressed	gene	SSRP1-like FACT complex subunit, putative, expressed	chr5	4965403	4971007	+	CDS,promoter
3	LOC_Os08g39820	pre-rRNA-processing protein TSR2, putative, expressed	gene	pre-rRNA-processing protein TSR2, putative, expressed	chr8	25204044	25207388	+	CDS
3	LOC_Os09g38060	nicotinate-nucleotide pyrophosphorylase, putative, expressed	gene	nicotinate-nucleotide pyrophosphorylase, putative, expressed	chr9	21930510	21934482	+	CDS,three_prime_UTR
3	LOC_Os11g01439	chloroplast unusual positioning protein, putative, expressed	gene	chloroplast unusual positioning protein, putative, expressed	chr11	255829	261013	-	CDS
3	LOC_Os02g49760	potassium transporter, putative, expressed	gene	potassium transporter, putative, expressed	chr2	30412584	30417535	+	CDS,three_prime_UTR
3	LOC_Os12g20144	expressed protein	gene	expressed protein	chr12	11713222	11721956	+	three_prime_UTR
3	LOC_Os03g19920	expressed protein	gene	expressed protein	chr3	11198068	11203840	-	CDS
3	LOC_Os03g23980	NAD dependent epimerase/dehydratase family protein, putative, expressed	gene	NAD dependent epimerase/dehydratase family protein, putative, expressed	chr3	13607613	13610800	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g54090	expressed protein	gene	expressed protein	chr2	33123662	33128279	-	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os01g64980	ion channel DMI1, chloroplast precursor, putative, expressed	gene	ion channel DMI1, chloroplast precursor, putative, expressed	chr1	37713253	37719609	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g11000	agenet domain containing protein, putative, expressed	gene	agenet domain containing protein, putative, expressed	chr2	5841781	5847597	+	three_prime_UTR,downstream
3	LOC_Os05g30730	expressed protein	gene	expressed protein	chr5	17733182	17734612	-	CDS,promoter
3	LOC_Os05g46220	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr5	26743216	26747137	+	three_prime_UTR,promoter,downstream
3	LOC_Os03g10510	outer mitochondrial membrane porin, putative, expressed	gene	outer mitochondrial membrane porin, putative, expressed	chr3	5347254	5351016	-	CDS,three_prime_UTR
3	LOC_Os12g36194	nucleoside diphosphate kinase, putative, expressed	gene	nucleoside diphosphate kinase, putative, expressed	chr12	22149432	22156455	+	CDS,three_prime_UTR
3	LOC_Os03g20630	histidine triad family protein, putative, expressed	gene	histidine triad family protein, putative, expressed	chr3	11671498	11676235	+	CDS,three_prime_UTR
3	LOC_Os03g39640	CBS domain containing protein, expressed	gene	CBS domain containing protein, expressed	chr3	22014658	22028247	-	CDS
3	LOC_Os03g18160	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr3	10170705	10173430	+	CDS,three_prime_UTR
3	LOC_Os11g36960	dnaJ domain containing protein, expressed	gene	dnaJ domain containing protein, expressed	chr11	21339976	21343407	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g39800	SET domain containing protein	gene	SET domain containing protein	chr2	24044257	24047199	-	CDS,promoter
3	LOC_Os01g68710	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	chr1	39912847	39915451	-	CDS
3	LOC_Os03g29950	glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed	gene	glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed	chr3	17066602	17071063	+	CDS
3	LOC_Os09g28770	patatin, putative, expressed	gene	patatin, putative, expressed	chr9	17475730	17478575	+	CDS,promoter,downstream
3	LOC_Os07g13234	expressed protein	gene	expressed protein	chr7	7579980	7582782	-	three_prime_UTR
3	LOC_Os03g62379	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr3	35328439	35329973	-	CDS,promoter,downstream
3	LOC_Os02g58650	expressed protein	gene	expressed protein	chr2	35834220	35839312	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g08030	expressed protein	gene	expressed protein	chr12	4081206	4084391	+	three_prime_UTR,downstream
3	LOC_Os12g02420	WRKY DNA-binding domain containing protein, expressed	gene	WRKY DNA-binding domain containing protein, expressed	chr12	801489	805097	-	CDS
3	LOC_Os01g37380	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr1	20868919	20871802	+	CDS
3	LOC_Os01g71960	endonuclease, putative, expressed	gene	endonuclease, putative, expressed	chr1	41690131	41697663	+	CDS
3	LOC_Os11g11770	disease resistance protein RPM1, putative, expressed	gene	disease resistance protein RPM1, putative, expressed	chr11	6528613	6531678	-	CDS
3	LOC_Os06g50679	expressed protein	gene	expressed protein	chr6	30669851	30676152	-	three_prime_UTR,promoter
3	LOC_Os07g29794	calmodulin binding heat shock protein, putative, expressed	gene	calmodulin binding heat shock protein, putative, expressed	chr7	17513089	17519858	+	CDS
3	LOC_Os04g41490	DNA-directed RNA polymerase III subunit RPC1, putative, expressed	gene	DNA-directed RNA polymerase III subunit RPC1, putative, expressed	chr4	24408096	24419738	+	CDS,three_prime_UTR
3	LOC_Os10g02760	hydroxyproline-rich glycoprotein family protein, putative, expressed	gene	hydroxyproline-rich glycoprotein family protein, putative, expressed	chr10	1084145	1088524	-	CDS,three_prime_UTR
3	LOC_Os07g05740	receptor-like protein kinase 2 precursor, putative, expressed	gene	receptor-like protein kinase 2 precursor, putative, expressed	chr7	2756220	2760926	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g54530	hydrolase, acting on carbon-nitrogen, putative, expressed	gene	hydrolase, acting on carbon-nitrogen, putative, expressed	chr1	31361590	31364550	+	CDS,three_prime_UTR
3	LOC_Os02g40080	tic20, putative, expressed	gene	tic20, putative, expressed	chr2	24262282	24264152	+	three_prime_UTR,downstream
3	LOC_Os05g37160	tubulin/FtsZ domain containing protein, putative, expressed	gene	tubulin/FtsZ domain containing protein, putative, expressed	chr5	21649362	21653096	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os08g04390	basic helix-loop-helix DND-binding domain containing protein, expressed	gene	basic helix-loop-helix DND-binding domain containing protein, expressed	chr8	2147786	2150534	-	CDS
3	LOC_Os01g12250	expressed protein	gene	expressed protein	chr1	6693004	6695795	-	CDS
3	LOC_Os01g65560	snRK1-interacting protein 1, putative, expressed	gene	snRK1-interacting protein 1, putative, expressed	chr1	38054590	38056799	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g04010	M-phase phosphoprotein 10, putative, expressed	gene	M-phase phosphoprotein 10, putative, expressed	chr12	1662763	1667987	-	CDS,three_prime_UTR
3	LOC_Os03g27780	protein phosphotase protein, putative, expressed	gene	protein phosphotase protein, putative, expressed	chr3	15931171	15935518	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g39470	expressed protein	gene	expressed protein	chr10	20994783	21003560	+	five_prime_UTR,CDS,promoter
3	LOC_Os07g08840	thioredoxin, putative, expressed	gene	thioredoxin, putative, expressed	chr7	4573246	4575235	-	three_prime_UTR,promoter
3	LOC_Os02g38680	EMB2423, putative	gene	EMB2423, putative	chr2	23372186	23378771	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g64490	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr1	37415987	37422331	-	CDS,three_prime_UTR
3	LOC_Os04g39280	ATPOT1, putative, expressed	gene	ATPOT1, putative, expressed	chr4	23182031	23187596	-	CDS
3	LOC_Os02g21260	OsFBL8 - F-box domain and LRR containing protein, expressed	gene	OsFBL8 - F-box domain and LRR containing protein, expressed	chr2	12613764	12618499	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g02480	basic helix-loop-helix DND-binding domain containing protein, expressed	gene	basic helix-loop-helix DND-binding domain containing protein, expressed	chr2	874691	878615	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g40590	oxysterol-binding protein, putative, expressed	gene	oxysterol-binding protein, putative, expressed	chr10	21677897	21683338	+	CDS,three_prime_UTR
3	LOC_Os03g17730	P-protein, putative, expressed	gene	P-protein, putative, expressed	chr3	9862751	9867713	+	CDS,three_prime_UTR
3	LOC_Os09g31438	OsSPL17 - SBP-box gene family member, expressed	gene	OsSPL17 - SBP-box gene family member, expressed	chr9	18917260	18920656	-	CDS
3	LOC_Os01g59140	DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative, expressed	gene	DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative, expressed	chr1	34162475	34165339	-	CDS,three_prime_UTR
3	LOC_Os07g01880	VIP4, putative, expressed	gene	VIP4, putative, expressed	chr7	525111	533343	-	CDS,three_prime_UTR,downstream
3	LOC_Os11g36150	receptor-like protein kinase 2 precursor, putative, expressed	gene	receptor-like protein kinase 2 precursor, putative, expressed	chr11	20784733	20788561	-	CDS,three_prime_UTR
3	LOC_Os05g04070	expressed protein	gene	expressed protein	chr5	1830722	1833309	-	CDS
3	LOC_Os02g51850	OsAPRL3  adenosine 5'-phosphosulfate reductase-like OsAPRL3, expressed	gene	OsAPRL3  adenosine 5'-phosphosulfate reductase-like OsAPRL3, expressed	chr2	31753149	31755693	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g11110	expressed protein	gene	expressed protein	chr10	6161131	6167051	+	CDS,three_prime_UTR
3	LOC_Os05g40970	hypothetical protein	gene	hypothetical protein	chr5	23957512	23959053	-	CDS,promoter
3	LOC_Os10g05010	expressed protein	gene	expressed protein	chr10	2444634	2447025	+	three_prime_UTR,downstream
3	LOC_Os06g39624	transposon protein, putative, Pong sub-class, expressed	gene	transposon protein, putative, Pong sub-class, expressed	chr6	23520939	23525722	+	three_prime_UTR
3	LOC_Os06g08180	expressed protein	gene	expressed protein	chr6	3965031	3968600	-	CDS,three_prime_UTR
3	LOC_Os03g13550	oxidoreductase, putative, expressed	gene	oxidoreductase, putative, expressed	chr3	7322973	7327864	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g52780	HVA22, putative, expressed	gene	HVA22, putative, expressed	chr1	30362018	30369168	-	CDS
3	LOC_Os05g47560	serine/threonine-protein kinase SNT7, chloroplast precursor, putative, expressed	gene	serine/threonine-protein kinase SNT7, chloroplast precursor, putative, expressed	chr5	27182602	27186804	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g27300	expressed protein	gene	expressed protein	chr10	14331792	14335948	+	three_prime_UTR
3	LOC_Os05g46770	expressed protein	gene	expressed protein	chr5	27022588	27026670	+	three_prime_UTR,downstream
3	LOC_Os07g36180	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr7	21620449	21623428	+	CDS,three_prime_UTR
3	LOC_Os03g10990	retinoblastoma-binding protein-like, putative, expressed	gene	retinoblastoma-binding protein-like, putative, expressed	chr3	5645147	5649212	-	CDS,three_prime_UTR
3	LOC_Os04g49420	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	gene	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	chr4	29302844	29304425	-	three_prime_UTR,promoter
3	LOC_Os06g01840	nodulin, putative, expressed	gene	nodulin, putative, expressed	chr6	476099	478492	+	three_prime_UTR
3	LOC_Os10g04050	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr10	1857210	1865049	+	five_prime_UTR
3	LOC_Os11g06740	syntaxin 6, putative, expressed	gene	syntaxin 6, putative, expressed	chr11	3286709	3289470	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g31690	expressed protein	gene	expressed protein	chr5	18387486	18391692	+	CDS,three_prime_UTR
3	LOC_Os05g32360	cyclin-dependent kinase C-1, putative, expressed	gene	cyclin-dependent kinase C-1, putative, expressed	chr5	18805965	18809719	+	CDS,promoter
3	LOC_Os03g21890	potassium transporter, putative, expressed	gene	potassium transporter, putative, expressed	chr3	12523194	12527601	+	CDS
3	LOC_Os02g03940	expressed protein	gene	expressed protein	chr2	1672928	1676493	-	CDS
3	LOC_Os09g25580	monogalactosyldiacylglycerol synthase, putative, expressed	gene	monogalactosyldiacylglycerol synthase, putative, expressed	chr9	15348071	15354639	-	CDS,three_prime_UTR
3	LOC_Os01g72820	CRS1/YhbY domain containing protein, putative, expressed	gene	CRS1/YhbY domain containing protein, putative, expressed	chr1	42239742	42244204	+	CDS,three_prime_UTR
3	LOC_Os12g06740	OsFBX440 - F-box domain containing protein, expressed	gene	OsFBX440 - F-box domain containing protein, expressed	chr12	3279334	3282712	+	CDS,three_prime_UTR
3	LOC_Os09g19890	expressed protein	gene	expressed protein	chr9	11903340	11907231	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g73670	expressed protein	gene	expressed protein	chr1	42683824	42688382	+	CDS,three_prime_UTR,promoter
3	LOC_Os09g19160	serine/threonine-protein kinase, putative, expressed	gene	serine/threonine-protein kinase, putative, expressed	chr9	11448826	11457901	+	CDS,promoter
3	LOC_Os10g35030	IAP100, putative, expressed	gene	IAP100, putative, expressed	chr10	18616080	18622210	-	CDS,three_prime_UTR
3	LOC_Os01g02020	acetyl-CoA acetyltransferase, cytosolic, putative, expressed	gene	acetyl-CoA acetyltransferase, cytosolic, putative, expressed	chr1	548108	552287	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g45040	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr4	26458896	26465142	+	three_prime_UTR
3	LOC_Os03g63040	expressed protein	gene	expressed protein	chr3	35640538	35646451	+	CDS,three_prime_UTR
3	LOC_Os09g24220	MSH-like DNA mismatch repair protein, putative	gene	MSH-like DNA mismatch repair protein, putative	chr9	14377099	14385812	+	CDS,downstream
3	LOC_Os11g24560	protein transport protein, putative, expressed	gene	protein transport protein, putative, expressed	chr11	13551101	13558781	+	CDS
3	LOC_Os03g62340	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr3	35305320	35310228	-	CDS
3	LOC_Os01g55020	expressed protein	gene	expressed protein	chr1	31634521	31637386	+	three_prime_UTR,downstream
3	LOC_Os12g19350	expressed protein	gene	expressed protein	chr12	11215946	11230320	-	CDS
3	LOC_Os04g55210	chloride channel protein, putative, expressed	gene	chloride channel protein, putative, expressed	chr4	32635532	32640318	+	CDS,three_prime_UTR
3	LOC_Os08g43730	DUF630/DUF632 domains containing protein, putative, expressed	gene	DUF630/DUF632 domains containing protein, putative, expressed	chr8	27632257	27636933	+	three_prime_UTR,downstream
3	LOC_Os01g31110	CRS2-associated factor 1, chloroplast precursor, putative, expressed	gene	CRS2-associated factor 1, chloroplast precursor, putative, expressed	chr1	17011475	17015278	+	CDS
3	LOC_Os08g34140	vesicle transport v-SNARE protein, putative, expressed	gene	vesicle transport v-SNARE protein, putative, expressed	chr8	21397365	21400789	-	CDS,three_prime_UTR
3	LOC_Os07g07220	LSM domain containing protein, expressed	gene	LSM domain containing protein, expressed	chr7	3573405	3575954	+	three_prime_UTR
3	LOC_Os02g51810	expressed protein	gene	expressed protein	chr2	31733624	31741517	+	CDS,downstream
3	LOC_Os03g04300	ankyrin repeat domain containing protein, expressed	gene	ankyrin repeat domain containing protein, expressed	chr3	1969292	1978563	-	three_prime_UTR
3	LOC_Os07g42800	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr7	25635709	25638900	+	three_prime_UTR,downstream
3	LOC_Os08g05560	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr8	2971600	2975417	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g38410	sialin, putative, expressed	gene	sialin, putative, expressed	chr9	22106871	22111218	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os12g11500	resistance protein SlVe1 precursor, putative	gene	resistance protein SlVe1 precursor, putative	chr12	6223134	6226115	+	CDS
3	LOC_Os02g01500	2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed	gene	2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed	chr2	287571	293886	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g21510	inactive receptor kinase At2g26730 precursor, putative, expressed	gene	inactive receptor kinase At2g26730 precursor, putative, expressed	chr3	12285393	12290347	+	CDS,downstream
3	LOC_Os09g25420	ZOS9-06 - C2H2 zinc finger protein, expressed	gene	ZOS9-06 - C2H2 zinc finger protein, expressed	chr9	15233822	15236823	-	CDS,three_prime_UTR
3	LOC_Os06g42030	potassium transporter, putative, expressed	gene	potassium transporter, putative, expressed	chr6	25234284	25241968	-	CDS,promoter
3	LOC_Os05g47930	OsQSOXL1  quiescin-sulfhydryl oxidase-like OsQSOXL1, expressed	gene	OsQSOXL1  quiescin-sulfhydryl oxidase-like OsQSOXL1, expressed	chr5	27411401	27416420	-	CDS,three_prime_UTR
3	LOC_Os07g17260	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr7	10177623	10187435	+	five_prime_UTR,CDS,promoter
3	LOC_Os08g40260	OsSPL15 - SBP-box gene family member, expressed	gene	OsSPL15 - SBP-box gene family member, expressed	chr8	25479205	25484831	+	three_prime_UTR
3	LOC_Os07g37230	inositol-1-monophosphatase, putative, expressed	gene	inositol-1-monophosphatase, putative, expressed	chr7	22308421	22312598	-	CDS,three_prime_UTR
3	LOC_Os10g31856	midasin-related, putative, expressed	gene	midasin-related, putative, expressed	chr10	16638950	16644310	-	CDS
3	LOC_Os11g01869	double-stranded RNA binding motif containing protein, expressed	gene	double-stranded RNA binding motif containing protein, expressed	chr11	456107	460681	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g48980	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr5	28030180	28031935	-	three_prime_UTR,promoter
3	LOC_Os11g10530	expressed protein	gene	expressed protein	chr11	5766400	5767822	-	CDS
3	LOC_Os02g13140	xaa-Pro dipeptidase, putative, expressed	gene	xaa-Pro dipeptidase, putative, expressed	chr2	6985223	6993606	+	CDS,three_prime_UTR,promoter
3	LOC_Os02g21190	expressed protein	gene	expressed protein	chr2	12569875	12588377	+	three_prime_UTR,downstream
3	LOC_Os12g06670	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr12	3235060	3242709	-	CDS
3	LOC_Os03g08460	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr3	4342727	4344718	-	three_prime_UTR
3	LOC_Os12g02385	outer membrane protein, OMP85 family, putative	gene	outer membrane protein, OMP85 family, putative	chr12	779039	782513	-	CDS,promoter,downstream
3	LOC_Os09g06560	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr9	3117920	3124244	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g23720	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr5	13553095	13556987	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g53220	signal recognition particle 14 kDa protein, putative, expressed	gene	signal recognition particle 14 kDa protein, putative, expressed	chr4	31512103	31515182	+	CDS,three_prime_UTR,promoter
3	LOC_Os07g12110	eukaryotic translation initiation factor 3 subunit E, putative, expressed	gene	eukaryotic translation initiation factor 3 subunit E, putative, expressed	chr7	6762485	6766334	-	CDS,three_prime_UTR
3	LOC_Os01g73990	cytochrome b5-like Heme/Steroid binding domain containing protein, expressed	gene	cytochrome b5-like Heme/Steroid binding domain containing protein, expressed	chr1	42857720	42859542	+	three_prime_UTR,downstream
3	LOC_Os09g33940	expressed protein	gene	expressed protein	chr9	20027642	20037159	+	three_prime_UTR,CDS,promoter,downstream
3	LOC_Os06g28630	expressed protein	gene	expressed protein	chr6	16301036	16304080	+	five_prime_UTR,CDS,promoter
3	LOC_Os02g24080	SNARE domain containing protein, putative, expressed	gene	SNARE domain containing protein, putative, expressed	chr2	13943553	13946014	-	CDS,three_prime_UTR
3	LOC_Os09g02650	kinesin motor domain containing protein, putative, expressed	gene	kinesin motor domain containing protein, putative, expressed	chr9	1157082	1166873	+	CDS,three_prime_UTR
3	LOC_Os01g64250	hemerythrin family protein, expressed	gene	hemerythrin family protein, expressed	chr1	37302474	37306915	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g55690	CCB4, putative, expressed	gene	CCB4, putative, expressed	chr4	32962276	32965398	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g10590	expressed protein	gene	expressed protein	chr5	5763711	5767435	+	CDS,three_prime_UTR
3	LOC_Os05g23610	protein phosphatase inhibitor 2 containing protein, expressed	gene	protein phosphatase inhibitor 2 containing protein, expressed	chr5	13478884	13483624	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g27350	cysteine protease ATG4, putative, expressed	gene	cysteine protease ATG4, putative, expressed	chr3	15660498	15664317	+	CDS
3	LOC_Os01g36080	protein phosphatase 2C containing protein, expressed	gene	protein phosphatase 2C containing protein, expressed	chr1	19961412	19969066	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g08090	expressed protein	gene	expressed protein	chr5	4401839	4408248	+	CDS,three_prime_UTR
3	LOC_Os06g03560	oligopeptide transporter, putative, expressed	gene	oligopeptide transporter, putative, expressed	chr6	1370829	1374477	-	CDS
3	LOC_Os02g05310	splicing factor 3B subunit 1, putative, expressed	gene	splicing factor 3B subunit 1, putative, expressed	chr2	2545982	2551238	+	CDS,three_prime_UTR
3	LOC_Os06g06940	S-locus-like receptor protein kinase, putative, expressed	gene	S-locus-like receptor protein kinase, putative, expressed	chr6	3293198	3295359	-	CDS
3	LOC_Os04g28480	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr4	16691801	16698133	-	three_prime_UTR
3	LOC_Os01g46590	expressed protein	gene	expressed protein	chr1	26521671	26526261	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g34976	SET domain containing protein, expressed	gene	SET domain containing protein, expressed	chr4	21086102	21090883	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g03560	FHA domain containing protein, putative, expressed	gene	FHA domain containing protein, putative, expressed	chr3	1551689	1558149	-	CDS
3	LOC_Os09g36350	endoglucanase, putative, expressed	gene	endoglucanase, putative, expressed	chr9	20975967	20980195	-	CDS,three_prime_UTR,downstream
3	LOC_Os04g57880	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr4	34304812	34307618	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g16010	acetyltransferase, GNAT family, putative, expressed	gene	acetyltransferase, GNAT family, putative, expressed	chr8	9756403	9759711	+	CDS,three_prime_UTR
3	LOC_Os01g60700	serine/threonine-protein kinase NAK, putative, expressed	gene	serine/threonine-protein kinase NAK, putative, expressed	chr1	35095134	35099658	-	CDS,three_prime_UTR
3	LOC_Os03g12630	expressed protein	gene	expressed protein	chr3	6715365	6719197	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g35000	ARID/BRIGHT DNA-binding domain containing protein, expressed	gene	ARID/BRIGHT DNA-binding domain containing protein, expressed	chr8	22036137	22045964	-	CDS,three_prime_UTR
3	LOC_Os02g57060	OsCttP2 - Putative C-terminal processing peptidase homologue, expressed	gene	OsCttP2 - Putative C-terminal processing peptidase homologue, expressed	chr2	34932239	34935747	+	CDS,three_prime_UTR
3	LOC_Os02g07070	RNA recognition motif family protein, expressed	gene	RNA recognition motif family protein, expressed	chr2	3623605	3631548	-	three_prime_UTR,CDS,promoter
3	LOC_Os03g56800	CBS domain containing membrane protein, putative, expressed	gene	CBS domain containing membrane protein, putative, expressed	chr3	32358614	32364146	+	CDS,three_prime_UTR
3	LOC_Os11g03990	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr11	1609887	1614246	-	CDS,three_prime_UTR
3	LOC_Os10g05730	armadillo/beta-catenin repeat family protein, putative, expressed	gene	armadillo/beta-catenin repeat family protein, putative, expressed	chr10	2884270	2888758	-	three_prime_UTR
3	LOC_Os06g36650	ABC transporter family protein, putative, expressed	gene	ABC transporter family protein, putative, expressed	chr6	21537701	21543238	+	CDS,downstream
3	LOC_Os02g12360	nuclear protein ZAP-related, putative, expressed	gene	nuclear protein ZAP-related, putative, expressed	chr2	6433220	6441715	-	CDS,three_prime_UTR
3	LOC_Os11g06390	actin, putative, expressed	gene	actin, putative, expressed	chr11	3074762	3078115	+	three_prime_UTR
3	LOC_Os01g53930	hexokinase, putative, expressed	gene	hexokinase, putative, expressed	chr1	31007962	31012957	-	three_prime_UTR,CDS
3	LOC_Os05g18540	transposon protein, putative, CACTA, En/Spm sub-class	gene	transposon protein, putative, CACTA, En/Spm sub-class	chr5	10728700	10736134	+	CDS
3	LOC_Os08g40850	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr8	25845914	25850407	-	CDS,three_prime_UTR
3	LOC_Os10g35640	Rf1, mitochondrial precursor, putative, expressed	gene	Rf1, mitochondrial precursor, putative, expressed	chr10	18985444	18988240	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g44030	myb/SANT domain protein, putative	gene	myb/SANT domain protein, putative	chr7	26312200	26313858	-	CDS,downstream
3	LOC_Os03g27040	heavy metal-associated domain containing protein, expressed	gene	heavy metal-associated domain containing protein, expressed	chr3	15478390	15480786	-	CDS,three_prime_UTR
3	LOC_Os08g03310	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr8	1535571	1539379	+	CDS,three_prime_UTR
3	LOC_Os04g10690	inorganic phosphate transporter, putative, expressed	gene	inorganic phosphate transporter, putative, expressed	chr4	5806762	5808521	-	three_prime_UTR,promoter
3	LOC_Os02g52950	expressed protein	gene	expressed protein	chr2	32371945	32375649	-	three_prime_UTR,promoter
3	LOC_Os06g33360	RGH1A, putative, expressed	gene	RGH1A, putative, expressed	chr6	19433825	19438090	+	three_prime_UTR,downstream
3	LOC_Os06g30470	expressed protein	gene	expressed protein	chr6	17608751	17612595	+	three_prime_UTR
3	LOC_Os11g45750	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr11	27212027	27223457	-	CDS
3	LOC_Os05g06320	ethylene receptor, putative, expressed	gene	ethylene receptor, putative, expressed	chr5	3232986	3237359	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g08100	DNA replication licensing factor MCM3 homolog 3, putative, expressed	gene	DNA replication licensing factor MCM3 homolog 3, putative, expressed	chr5	4413410	4414811	+	three_prime_UTR,downstream
3	LOC_Os11g37060	OsFBDUF52 - F-box and DUF domain containing protein, expressed	gene	OsFBDUF52 - F-box and DUF domain containing protein, expressed	chr11	21415487	21416850	+	CDS,downstream
3	LOC_Os09g30462	expressed protein	gene	expressed protein	chr9	18563833	18564736	+	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os08g01650	Rf1, mitochondrial precursor, putative, expressed	gene	Rf1, mitochondrial precursor, putative, expressed	chr8	380307	382986	-	CDS,three_prime_UTR
3	LOC_Os11g12050	NBS-LRR type disease resistance protein, putative, expressed	gene	NBS-LRR type disease resistance protein, putative, expressed	chr11	6698873	6704990	+	five_prime_UTR,CDS
3	LOC_Os09g34110	expressed protein	gene	expressed protein	chr9	20127673	20133970	-	three_prime_UTR
3	LOC_Os04g20230	neighbor of COX4, putative, expressed	gene	neighbor of COX4, putative, expressed	chr4	11280545	11284891	-	CDS
3	LOC_Os08g27150	chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed	gene	chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed	chr8	16579912	16583707	-	CDS,three_prime_UTR
3	LOC_Os03g61110	RNA-binding motif protein, putative, expressed	gene	RNA-binding motif protein, putative, expressed	chr3	34705667	34707976	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g11840	coatomer subunit beta-2, putative, expressed	gene	coatomer subunit beta-2, putative, expressed	chr2	6131748	6138158	-	CDS,three_prime_UTR
3	LOC_Os03g01100	endonuclease, putative, expressed	gene	endonuclease, putative, expressed	chr3	65406	70798	+	CDS,three_prime_UTR,promoter
3	LOC_Os12g33210	OsFBL59 - F-box domain and LRR containing protein, expressed	gene	OsFBL59 - F-box domain and LRR containing protein, expressed	chr12	20055654	20059554	+	CDS,three_prime_UTR,promoter
3	LOC_Os06g12460	CSLA3 - cellulose synthase-like family A; mannan synthase, expressed	gene	CSLA3 - cellulose synthase-like family A; mannan synthase, expressed	chr6	6757182	6761996	+	CDS
3	LOC_Os07g47260	H-BTB7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed	gene	H-BTB7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed	chr7	28246349	28248715	+	three_prime_UTR,downstream
3	LOC_Os06g20390	expressed protein	gene	expressed protein	chr6	11711593	11716066	+	CDS,downstream
3	LOC_Os06g50706	expressed protein	gene	expressed protein	chr6	30681364	30683924	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g46600	DnaK family protein, putative, expressed	gene	DnaK family protein, putative, expressed	chr6	28285536	28292451	+	CDS
3	LOC_Os03g09220	stage II sporulation protein E, putative, expressed	gene	stage II sporulation protein E, putative, expressed	chr3	4814466	4819419	+	CDS
3	LOC_Os01g42010	expressed protein	gene	expressed protein	chr1	23813778	23818245	-	CDS,three_prime_UTR
3	LOC_Os11g06450	hypothetical protein	gene	hypothetical protein	chr11	3108856	3109796	-	CDS,promoter
3	LOC_Os01g65090	aminotransferase, classes I and II, domain containing protein, expressed	gene	aminotransferase, classes I and II, domain containing protein, expressed	chr1	37778466	37781841	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g20960	expressed protein	gene	expressed protein	chr4	11755414	11788691	+	CDS
3	LOC_Os01g29830	expressed protein	gene	expressed protein	chr1	16715629	16718398	+	three_prime_UTR,downstream
3	LOC_Os07g19060	transport protein particle component, Bet3, domain containing protein, expressed	gene	transport protein particle component, Bet3, domain containing protein, expressed	chr7	11279309	11284331	-	CDS
3	LOC_Os03g58970	expressed protein	gene	expressed protein	chr3	33572355	33578108	+	CDS,three_prime_UTR
3	LOC_Os09g31360	expressed protein	gene	expressed protein	chr9	18848755	18852448	+	CDS,three_prime_UTR
3	LOC_Os05g16250	expressed protein	gene	expressed protein	chr5	9188299	9192319	+	CDS
3	LOC_Os05g46440	hypothetical protein	gene	hypothetical protein	chr5	26844562	26844959	-	CDS,downstream
3	LOC_Os06g30970	ubiquitin-conjugating enzyme, putative, expressed	gene	ubiquitin-conjugating enzyme, putative, expressed	chr6	18014323	18016700	-	CDS,three_prime_UTR
3	LOC_Os01g09020	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr1	4533021	4539216	+	CDS
3	LOC_Os06g14412	expressed protein	gene	expressed protein	chr6	8054255	8066365	+	CDS
3	LOC_Os12g03740	OsFBX438 - F-box domain containing protein, expressed	gene	OsFBX438 - F-box domain containing protein, expressed	chr12	1513456	1518357	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g63840	3-deoxy-D-manno-octulosonic-acid transferase, putative, expressed	gene	3-deoxy-D-manno-octulosonic-acid transferase, putative, expressed	chr1	37038513	37042191	-	CDS,three_prime_UTR
3	LOC_Os08g40420	ternary complex factor MIP1, putative, expressed	gene	ternary complex factor MIP1, putative, expressed	chr8	25582066	25587508	+	CDS,downstream
3	LOC_Os03g60790	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr3	34532387	34534186	+	five_prime_UTR,three_prime_UTR,promoter,downstream
3	LOC_Os02g26550	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	gene	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	chr2	15578247	15584666	+	three_prime_UTR,promoter
3	LOC_Os06g36940	expressed protein	gene	expressed protein	chr6	21762121	21764047	-	CDS
3	LOC_Os04g40400	eukaryotic translation initiation factor 4B, putative, expressed	gene	eukaryotic translation initiation factor 4B, putative, expressed	chr4	23827935	23831738	+	CDS,three_prime_UTR
3	LOC_Os03g53110	CorA-like magnesium transporter protein, putative, expressed	gene	CorA-like magnesium transporter protein, putative, expressed	chr3	30446648	30451961	-	CDS,three_prime_UTR
3	LOC_Os06g39260	solute carrier family 35 member B1, putative, expressed	gene	solute carrier family 35 member B1, putative, expressed	chr6	23302671	23306064	+	CDS,three_prime_UTR
3	LOC_Os02g39830	enhancer of rudimentary protein, putative, expressed	gene	enhancer of rudimentary protein, putative, expressed	chr2	24057253	24060620	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g03420	pentatricopeptide repeat-containing protein, putative, expressed	gene	pentatricopeptide repeat-containing protein, putative, expressed	chr2	1394865	1397141	+	three_prime_UTR,promoter,downstream
3	LOC_Os03g47980	expressed protein	gene	expressed protein	chr3	27269436	27275327	-	CDS,three_prime_UTR
3	LOC_Os09g36660	conserved hypothetical protein	gene	conserved hypothetical protein	chr9	21149216	21150900	-	CDS,promoter
3	LOC_Os09g38740	expressed protein	gene	expressed protein	chr9	22261731	22263897	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g16920	embryonic protein DC-8, putative, expressed	gene	embryonic protein DC-8, putative, expressed	chr1	9678804	9679872	+	three_prime_UTR,downstream
3	LOC_Os03g02762	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr3	1075129	1078380	+	three_prime_UTR,promoter
3	LOC_Os11g22404	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr11	12391337	12398235	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g45960	hydrolase, alpha/beta fold family domain containing protein, expressed	gene	hydrolase, alpha/beta fold family domain containing protein, expressed	chr1	26105792	26110178	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g23430	starch binding domain containing protein, putative, expressed	gene	starch binding domain containing protein, putative, expressed	chr8	14164996	14176175	-	CDS,three_prime_UTR
3	LOC_Os02g15660	tetratricopeptide repeat, putative, expressed	gene	tetratricopeptide repeat, putative, expressed	chr2	8809965	8813974	-	five_prime_UTR,CDS,downstream
3	LOC_Os01g60230	auxin efflux carrier component, putative, expressed	gene	auxin efflux carrier component, putative, expressed	chr1	34833329	34838781	+	CDS,three_prime_UTR
3	LOC_Os08g39350	glycerophosphoryl diester phosphodiesterase family protein, putative, expressed	gene	glycerophosphoryl diester phosphodiesterase family protein, putative, expressed	chr8	24863225	24869446	+	CDS,three_prime_UTR
3	LOC_Os09g27660	OsFBO21 - F-box and other domain containing protein, expressed	gene	OsFBO21 - F-box and other domain containing protein, expressed	chr9	16827921	16837597	+	three_prime_UTR
3	LOC_Os09g37020	expressed protein	gene	expressed protein	chr9	21354321	21357373	-	CDS,three_prime_UTR
3	LOC_Os03g42220	T-complex protein, putative, expressed	gene	T-complex protein, putative, expressed	chr3	23483665	23488915	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g45880	phosphotransferase, putative, expressed	gene	phosphotransferase, putative, expressed	chr5	26521988	26525724	+	CDS,promoter,downstream
3	LOC_Os08g14230	villin, putative, expressed	gene	villin, putative, expressed	chr8	8507453	8515439	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g33850	nucleoside-triphosphatase, putative, expressed	gene	nucleoside-triphosphatase, putative, expressed	chr8	21187494	21191710	+	CDS,three_prime_UTR
3	LOC_Os02g47880	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr2	29281836	29285765	-	three_prime_UTR,promoter
3	LOC_Os02g44690	HSPC171 protein, putative, expressed	gene	HSPC171 protein, putative, expressed	chr2	27073416	27076784	-	CDS,downstream
3	LOC_Os06g28970	bolA, putative, expressed	gene	bolA, putative, expressed	chr6	16508330	16511904	+	CDS
3	LOC_Os02g47310	Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed	gene	Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed	chr2	28888092	28891679	+	CDS,three_prime_UTR
3	LOC_Os06g08440	two-component response regulator, putative, expressed	gene	two-component response regulator, putative, expressed	chr6	4136249	4141664	+	CDS
3	LOC_Os02g19150	AAA family ATPase, putative, expressed	gene	AAA family ATPase, putative, expressed	chr2	11162260	11171490	-	CDS,three_prime_UTR
3	LOC_Os07g23480	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr7	13260125	13270509	-	CDS
3	LOC_Os06g17970	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr6	10444053	10450153	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os09g38755	E3 ubiquitin-protein ligase HERC2, putative, expressed	gene	E3 ubiquitin-protein ligase HERC2, putative, expressed	chr9	22268621	22272199	+	CDS,three_prime_UTR
3	LOC_Os01g69230	exo70 exocyst complex subunit domain containing protein, expressed	gene	exo70 exocyst complex subunit domain containing protein, expressed	chr1	40234047	40237403	+	three_prime_UTR,promoter,downstream
3	LOC_Os03g13810	expressed protein	gene	expressed protein	chr3	7479315	7482739	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g33514	expressed protein	gene	expressed protein	chr1	18445944	18447907	+	three_prime_UTR
3	LOC_Os02g50780	glycosyl hydrolase family 47 domain contain protein, expressed	gene	glycosyl hydrolase family 47 domain contain protein, expressed	chr2	30998090	31002834	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g01990	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr5	562876	566821	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g10760	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr2	5688698	5689806	+	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g62370	WD40-like Beta Propeller Repeat family protein, expressed	gene	WD40-like Beta Propeller Repeat family protein, expressed	chr3	35324921	35327291	+	three_prime_UTR,downstream
3	LOC_Os01g01689	phosphatidylinositol 3- and 4-kinase family protein, expressed	gene	phosphatidylinositol 3- and 4-kinase family protein, expressed	chr1	334809	370191	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g57330	IQ calmodulin-binding motif domain containing protein, expressed	gene	IQ calmodulin-binding motif domain containing protein, expressed	chr3	32693475	32697370	-	CDS
3	LOC_Os03g15700	splicing factor 3A subunit 2, putative, expressed	gene	splicing factor 3A subunit 2, putative, expressed	chr3	8659062	8661959	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g27040	lipid phosphatase protein, putative, expressed	gene	lipid phosphatase protein, putative, expressed	chr8	16516705	16521252	-	CDS,three_prime_UTR,downstream
3	LOC_Os02g57290	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr2	35085325	35093422	-	CDS
3	LOC_Os01g34430	expressed protein	gene	expressed protein	chr1	18978396	18988498	+	CDS
3	LOC_Os02g56970	uncharacterized protein yqjG, putative, expressed	gene	uncharacterized protein yqjG, putative, expressed	chr2	34907845	34909617	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os12g07110	acyl-CoA synthetase protein, putative, expressed	gene	acyl-CoA synthetase protein, putative, expressed	chr12	3482864	3488371	+	CDS
3	LOC_Os03g49380	lipoxygenase, putative, expressed	gene	lipoxygenase, putative, expressed	chr3	28099957	28106354	+	CDS
3	LOC_Os09g25960	glutamate receptor, putative	gene	glutamate receptor, putative	chr9	15587269	15593377	-	CDS,downstream
3	LOC_Os06g23370	expressed protein	gene	expressed protein	chr6	13634896	13639071	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g42540	ubiquitin thioesterase otubain-like, putative, expressed	gene	ubiquitin thioesterase otubain-like, putative, expressed	chr8	26880241	26884649	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g07030	expressed protein	gene	expressed protein	chr7	3464224	3468087	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g09914	expressed protein	gene	expressed protein	chr7	5275943	5278197	+	three_prime_UTR,downstream
3	LOC_Os01g05744	expressed protein	gene	expressed protein	chr1	2741507	2746439	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os03g11110	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr3	5709186	5714012	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g50230	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr3	28631355	28636690	-	CDS,three_prime_UTR
3	LOC_Os01g71220	zinc finger protein, putative, expressed	gene	zinc finger protein, putative, expressed	chr1	41202804	41207669	-	CDS,three_prime_UTR
3	LOC_Os03g02320	STE_PAK_Ste20_STLK.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	gene	STE_PAK_Ste20_STLK.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	chr3	799025	808300	+	CDS,three_prime_UTR
3	LOC_Os07g43030	calmodulin-binding transcription activator, putative, expressed	gene	calmodulin-binding transcription activator, putative, expressed	chr7	25775204	25782380	-	CDS
3	LOC_Os11g01280	expressed protein	gene	expressed protein	chr11	151112	154483	+	five_prime_UTR,CDS
3	LOC_Os05g50170	ATPCME, putative, expressed	gene	ATPCME, putative, expressed	chr5	28682644	28689164	-	CDS
3	LOC_Os10g39860	expressed protein	gene	expressed protein	chr10	21256152	21259130	+	three_prime_UTR,CDS
3	LOC_Os08g02690	MA3 domain containing protein, expressed	gene	MA3 domain containing protein, expressed	chr8	1120129	1125443	-	CDS
3	LOC_Os09g30230	disease resistance protein RPM1, putative, expressed	gene	disease resistance protein RPM1, putative, expressed	chr9	18401207	18403263	-	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os09g02700	polyadenylate-binding protein, putative, expressed	gene	polyadenylate-binding protein, putative, expressed	chr9	1211856	1217011	-	CDS
3	LOC_Os08g10590	expressed protein	gene	expressed protein	chr8	6231072	6233138	+	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os05g16640	DUF630/DUF632 domains containing protein, putative, expressed	gene	DUF630/DUF632 domains containing protein, putative, expressed	chr5	9438655	9443610	+	CDS,three_prime_UTR
3	LOC_Os10g42720	acyltransferase, putative, expressed	gene	acyltransferase, putative, expressed	chr10	22973166	22979213	+	three_prime_UTR
3	LOC_Os06g45440	haloacid dehalogenase-like hydrolase domain-containing protein 3, putative, expressed	gene	haloacid dehalogenase-like hydrolase domain-containing protein 3, putative, expressed	chr6	27468977	27470851	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g01490	outer membrane protein, OMP85 family, putative, expressed	gene	outer membrane protein, OMP85 family, putative, expressed	chr11	285980	292679	-	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os07g03140	ternary complex factor MIP1, putative	gene	ternary complex factor MIP1, putative	chr7	1201595	1205344	-	CDS
3	LOC_Os07g29480	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr7	17305817	17308592	-	five_prime_UTR,CDS
3	LOC_Os06g13170	expressed protein	gene	expressed protein	chr6	7220750	7223411	+	three_prime_UTR
3	LOC_Os03g19390	TENA/THI-4 family protein, putative, expressed	gene	TENA/THI-4 family protein, putative, expressed	chr3	10910411	10912329	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g14120	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	gene	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	chr2	7710511	7715738	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g31980	trehalose-6-phosphate synthase, putative, expressed	gene	trehalose-6-phosphate synthase, putative, expressed	chr8	19827615	19833374	-	CDS,promoter
3	LOC_Os02g04440	transducin family protein, putative, expressed	gene	transducin family protein, putative, expressed	chr2	1955268	1965696	+	CDS,three_prime_UTR
3	LOC_Os10g42630	expressed protein	gene	expressed protein	chr10	22915315	22918373	-	CDS
3	LOC_Os02g49310	AGC_PVPK_like_kin82y.7 - ACG kinases include homologs to PKA, PKG and PKC, expressed	gene	AGC_PVPK_like_kin82y.7 - ACG kinases include homologs to PKA, PKG and PKC, expressed	chr2	30129487	30132860	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g51410	OsPOP15 - Putative Prolyl Oligopeptidase homologue, expressed	gene	OsPOP15 - Putative Prolyl Oligopeptidase homologue, expressed	chr6	31135654	31144707	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g51840	expressed protein	gene	expressed protein	chr2	31748756	31752491	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g07800	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr3	3969212	3973528	+	CDS,three_prime_UTR
3	LOC_Os08g27824	NOL1/NOP2/sun family protein, putative, expressed	gene	NOL1/NOP2/sun family protein, putative, expressed	chr8	16943771	16957279	-	CDS
3	LOC_Os09g25320	ubiquitin family protein, putative, expressed	gene	ubiquitin family protein, putative, expressed	chr9	15159889	15161889	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g24870	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr3	14164238	14169097	-	CDS,downstream
3	LOC_Os06g36050	expressed protein	gene	expressed protein	chr6	21065262	21068933	-	CDS
3	LOC_Os01g11920	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr1	6470718	6484507	+	CDS
3	LOC_Os07g39800	transcription repressor HOTR, putative, expressed	gene	transcription repressor HOTR, putative, expressed	chr7	23841495	23844464	-	CDS
3	LOC_Os01g60190	2,3-bisphosphoglycerate-independent phosphoglycerate mutase, putative, expressed	gene	2,3-bisphosphoglycerate-independent phosphoglycerate mutase, putative, expressed	chr1	34803241	34807052	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g41520	casein kinase II subunit beta-4, putative, expressed	gene	casein kinase II subunit beta-4, putative, expressed	chr10	22237363	22242357	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g47120	CBS domain containing protein, expressed	gene	CBS domain containing protein, expressed	chr3	26644652	26650901	+	CDS,three_prime_UTR
3	LOC_Os04g48800	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr4	28924953	28927680	+	CDS,promoter
3	LOC_Os07g13540	pentatricopeptide repeat domain containing protein, putative, expressed	gene	pentatricopeptide repeat domain containing protein, putative, expressed	chr7	7752934	7756884	-	CDS,three_prime_UTR
3	LOC_Os07g42890	GRAM domain containing protein, expressed	gene	GRAM domain containing protein, expressed	chr7	25676801	25678854	+	three_prime_UTR,downstream
3	LOC_Os06g38940	RMD5 homolog A, putative, expressed	gene	RMD5 homolog A, putative, expressed	chr6	23097860	23101040	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g44810	expressed protein	gene	expressed protein	chr3	25266278	25271096	-	CDS,three_prime_UTR,five_prime_UTR,promoter
3	LOC_Os03g21250	glycosyl transferase, family 8, putative, expressed	gene	glycosyl transferase, family 8, putative, expressed	chr3	12132187	12137424	-	CDS,three_prime_UTR
3	LOC_Os05g08600	splicing factor, putative, expressed	gene	splicing factor, putative, expressed	chr5	4704620	4708634	+	CDS,three_prime_UTR
3	LOC_Os09g34310	expressed protein	gene	expressed protein	chr9	20251792	20254084	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g08730	uroporphyrinogen III synthase, putative, expressed	gene	uroporphyrinogen III synthase, putative, expressed	chr3	4495731	4499875	+	CDS
3	LOC_Os02g12810	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr2	6726340	6733499	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g36160	40S ribosomal protein S24, putative, expressed	gene	40S ribosomal protein S24, putative, expressed	chr6	21162221	21166195	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g24095	unknown	gene	unknown	chr2	13956195	13960112	-	five_prime_UTR
3	LOC_Os06g02180	CSLD2 - cellulose synthase-like family D, expressed	gene	CSLD2 - cellulose synthase-like family D, expressed	chr6	659149	664407	-	CDS,promoter
3	LOC_Os03g42230	B3 DNA binding domain containing protein, expressed	gene	B3 DNA binding domain containing protein, expressed	chr3	23490169	23494498	+	CDS,promoter
3	LOC_Os01g41250	OsFBX17 - F-box domain containing protein, expressed	gene	OsFBX17 - F-box domain containing protein, expressed	chr1	23346706	23348350	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g34650	hypothetical protein	gene	hypothetical protein	chr11	19811958	19815370	-	CDS
3	LOC_Os03g46410	transmembrane protein 56, putative, expressed	gene	transmembrane protein 56, putative, expressed	chr3	26238794	26242309	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g04890	hypothetical protein	gene	hypothetical protein	chr7	2158554	2159289	+	CDS,promoter,downstream
3	LOC_Os10g41740	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr10	22395508	22397097	+	CDS,promoter,downstream
3	LOC_Os06g41440	expressed protein	gene	expressed protein	chr6	24830693	24839135	+	CDS,three_prime_UTR
3	LOC_Os08g38086	heat shock protein, putative, expressed	gene	heat shock protein, putative, expressed	chr8	24122121	24126774	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g08080	expressed protein	gene	expressed protein	chr2	4264386	4268842	-	CDS,downstream
3	LOC_Os09g19274	expressed protein	gene	expressed protein	chr9	11537243	11540190	+	three_prime_UTR
3	LOC_Os06g36740	pollen-specific protein SF21, putative, expressed	gene	pollen-specific protein SF21, putative, expressed	chr6	21636462	21640998	-	CDS
3	LOC_Os03g08450	eukaryotic translation initiation factor 3 subunit K, putative, expressed	gene	eukaryotic translation initiation factor 3 subunit K, putative, expressed	chr3	4338452	4341738	-	CDS,three_prime_UTR,downstream
3	LOC_Os10g28009	expressed protein	gene	expressed protein	chr10	14441914	14449209	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g57870	RFC3 - Putative clamp loader of PCNA, replication factor C subunit 3, expressed	gene	RFC3 - Putative clamp loader of PCNA, replication factor C subunit 3, expressed	chr3	32956881	32960647	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g47780	WD repeat-containing protein, putative, expressed	gene	WD repeat-containing protein, putative, expressed	chr3	27113082	27116866	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g36000	FabA-like domain containing protein, expressed	gene	FabA-like domain containing protein, expressed	chr5	21260263	21262617	+	CDS,three_prime_UTR
3	LOC_Os02g36340	riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed	gene	riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed	chr2	21924748	21929696	-	CDS
3	LOC_Os05g32710	Alpha amylase, catalytic domain containing protein, expressed	gene	Alpha amylase, catalytic domain containing protein, expressed	chr5	19092454	19095084	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g37310	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr9	21550279	21556824	-	CDS,downstream
3	LOC_Os05g40270	expressed protein	gene	expressed protein	chr5	23590818	23600327	+	CDS,three_prime_UTR,five_prime_UTR
3	LOC_Os03g11670	pentatricopeptide repeat domain containing protein, putative, expressed	gene	pentatricopeptide repeat domain containing protein, putative, expressed	chr3	6088248	6090523	-	three_prime_UTR,promoter,downstream
3	LOC_Os04g58504	choline transporter-related, putative, expressed	gene	choline transporter-related, putative, expressed	chr4	34606738	34615646	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g56310	radical SAM enzyme, putative, expressed	gene	radical SAM enzyme, putative, expressed	chr1	32439127	32442274	+	CDS,promoter
3	LOC_Os01g50010	clathrin assembly protein, putative, expressed	gene	clathrin assembly protein, putative, expressed	chr1	28727932	28734027	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g37100	phospholipase D, putative, expressed	gene	phospholipase D, putative, expressed	chr9	21391293	21397468	+	CDS,three_prime_UTR
3	LOC_Os07g27960	thioesterase family protein, putative, expressed	gene	thioesterase family protein, putative, expressed	chr7	16305869	16308649	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g03740	OsFBX348 - F-box domain containing protein, expressed	gene	OsFBX348 - F-box domain containing protein, expressed	chr10	1687299	1690218	-	CDS
3	LOC_Os01g73450	amino acid kinase, putative, expressed	gene	amino acid kinase, putative, expressed	chr1	42561773	42565949	+	CDS,three_prime_UTR
3	LOC_Os02g49270	NOL1/NOP2/sun family protein, putative, expressed	gene	NOL1/NOP2/sun family protein, putative, expressed	chr2	30104372	30109766	+	CDS,three_prime_UTR
3	LOC_Os12g30510	DNA-directed RNA polymerase III subunit RPC9, putative, expressed	gene	DNA-directed RNA polymerase III subunit RPC9, putative, expressed	chr12	18282345	18284538	-	CDS,three_prime_UTR
3	LOC_Os03g53960	transcriptional adaptor, putative, expressed	gene	transcriptional adaptor, putative, expressed	chr3	30928473	30935894	-	CDS
3	LOC_Os03g11490	expressed protein	gene	expressed protein	chr3	5945380	5954641	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g01480	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	gene	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	chr4	320281	328266	+	CDS
3	LOC_Os04g32670	exostosin family domain containing protein, expressed	gene	exostosin family domain containing protein, expressed	chr4	19518587	19522713	+	three_prime_UTR,downstream
3	LOC_Os11g10980	pyruvate kinase, putative, expressed	gene	pyruvate kinase, putative, expressed	chr11	6055097	6061635	+	CDS,three_prime_UTR
3	LOC_Os05g39070	NLI interacting factor-like phosphatase, putative, expressed	gene	NLI interacting factor-like phosphatase, putative, expressed	chr5	22845379	22848151	+	three_prime_UTR,CDS
3	LOC_Os01g42234	amino acid permease family protein, putative, expressed	gene	amino acid permease family protein, putative, expressed	chr1	23922674	23932407	+	three_prime_UTR,promoter
3	LOC_Os01g56100	BSD domain containing protein, expressed	gene	BSD domain containing protein, expressed	chr1	32297811	32301991	+	CDS
3	LOC_Os03g11400	targeting protein-related, putative, expressed	gene	targeting protein-related, putative, expressed	chr3	5864076	5868280	+	CDS,three_prime_UTR,promoter
3	LOC_Os08g43380	TBC domain containing protein, expressed	gene	TBC domain containing protein, expressed	chr8	27406262	27411172	+	CDS
3	LOC_Os03g08480	rho termination factor, N-terminal domain containing protein, expressed	gene	rho termination factor, N-terminal domain containing protein, expressed	chr3	4355631	4362326	-	three_prime_UTR
3	LOC_Os01g51700	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr1	29729083	29734069	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g55210	TKL_IRAK_CrRLK1L-1.1 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed	gene	TKL_IRAK_CrRLK1L-1.1 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed	chr3	31407399	31410302	-	CDS
3	LOC_Os03g03880	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr3	1764296	1769689	+	CDS,three_prime_UTR
3	LOC_Os03g06420	expressed protein	gene	expressed protein	chr3	3207852	3210594	+	three_prime_UTR,promoter,downstream
3	LOC_Os11g14980	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr11	8434371	8436166	-	three_prime_UTR,promoter,downstream
3	LOC_Os04g34370	serine/threonine-protein kinase receptor precursor, putative, expressed	gene	serine/threonine-protein kinase receptor precursor, putative, expressed	chr4	20645951	20648698	+	CDS,three_prime_UTR
3	LOC_Os03g58390	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr3	33260062	33265172	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g01740	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr1	391081	395651	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g44780	elongation factor Tu family protein, putative, expressed	gene	elongation factor Tu family protein, putative, expressed	chr3	25249048	25252404	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g61100	GDP-mannose transporter, putative	gene	GDP-mannose transporter, putative	chr3	34701273	34703915	-	CDS,promoter
3	LOC_Os06g43660	inorganic H+ pyrophosphatase, putative, expressed	gene	inorganic H+ pyrophosphatase, putative, expressed	chr6	26271900	26277669	+	CDS
3	LOC_Os04g45600	NDH-M H PLASTOQUINONE DEHY, putative, expressed	gene	NDH-M H PLASTOQUINONE DEHY, putative, expressed	chr4	26792277	26793663	+	three_prime_UTR,downstream
3	LOC_Os05g46450	fiber protein Fb11, putative, expressed	gene	fiber protein Fb11, putative, expressed	chr5	26845080	26848310	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g03900	WRKY DNA-binding domain containing protein, expressed	gene	WRKY DNA-binding domain containing protein, expressed	chr5	1743351	1745266	+	three_prime_UTR,downstream
3	LOC_Os05g43380	tesmin/TSO1-like CXC domain containing protein, expressed	gene	tesmin/TSO1-like CXC domain containing protein, expressed	chr5	25162243	25164824	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g44050	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr5	25557972	25560773	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g09490	peptidase, T1 family, putative, expressed	gene	peptidase, T1 family, putative, expressed	chr5	5333704	5336883	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g69930	dnaJ domain containing protein, expressed	gene	dnaJ domain containing protein, expressed	chr1	40437190	40441401	+	CDS,downstream
3	LOC_Os01g53900	elongation factor, putative, expressed	gene	elongation factor, putative, expressed	chr1	30991367	30996138	+	five_prime_UTR,CDS
3	LOC_Os01g43380	glycosyltransferase family protein 1, putative, expressed	gene	glycosyltransferase family protein 1, putative, expressed	chr1	24812502	24817441	-	CDS,promoter
3	LOC_Os07g34964	TKL_IRAK_DUF26-lh.8 - DUF26 kinases have homology to DUF26 containing loci, expressed	gene	TKL_IRAK_DUF26-lh.8 - DUF26 kinases have homology to DUF26 containing loci, expressed	chr7	20943309	20946886	-	three_prime_UTR
3	LOC_Os06g36360	expressed protein	gene	expressed protein	chr6	21342400	21349396	-	CDS,three_prime_UTR
3	LOC_Os08g01880	synaptobrevin-related family protein, putative, expressed	gene	synaptobrevin-related family protein, putative, expressed	chr8	538637	540617	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g28820	ribonuclease 2-5A family protein, expressed	gene	ribonuclease 2-5A family protein, expressed	chr7	16869475	16874362	+	CDS
3	LOC_Os07g39780	SUMO-activating enzyme subunit 2, putative, expressed	gene	SUMO-activating enzyme subunit 2, putative, expressed	chr7	23832298	23839109	+	three_prime_UTR,CDS,downstream
3	LOC_Os05g05810	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr5	2906204	2913756	-	CDS
3	LOC_Os01g06520	verticillium wilt disease resistance protein, putative, expressed	gene	verticillium wilt disease resistance protein, putative, expressed	chr1	3066323	3070243	-	CDS,promoter
3	LOC_Os04g33500	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr4	20086862	20090663	-	three_prime_UTR,promoter
3	LOC_Os06g13215	growth regulator related protein, putative, expressed	gene	growth regulator related protein, putative, expressed	chr6	7255822	7258222	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g49310	MATE efflux family protein, putative, expressed	gene	MATE efflux family protein, putative, expressed	chr6	29876101	29884251	+	CDS,three_prime_UTR
3	LOC_Os04g42000	6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor, putative, expressed	gene	6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor, putative, expressed	chr4	24693002	24696589	-	CDS,promoter,downstream
3	LOC_Os06g27360	hypothetical protein	gene	hypothetical protein	chr6	15493555	15493989	+	CDS,promoter,downstream
3	LOC_Os01g27940	cyclin-L1-1, putative, expressed	gene	cyclin-L1-1, putative, expressed	chr1	15617195	15623540	-	CDS
3	LOC_Os04g23890	AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed	gene	AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed	chr4	13632299	13645569	-	CDS
3	LOC_Os01g15900	expressed protein	gene	expressed protein	chr1	8948249	8951712	-	CDS,promoter
3	LOC_Os02g48740	fimbrin-like protein 2, putative, expressed	gene	fimbrin-like protein 2, putative, expressed	chr2	29827376	29832174	+	CDS,three_prime_UTR
3	LOC_Os12g15400	CXE carboxylesterase, putative, expressed	gene	CXE carboxylesterase, putative, expressed	chr12	8789721	8794641	+	CDS
3	LOC_Os07g35540	TKL_IRAK_DUF26-lc.19 - DUF26 kinases have homology to DUF26 containing loci, expressed	gene	TKL_IRAK_DUF26-lc.19 - DUF26 kinases have homology to DUF26 containing loci, expressed	chr7	21264840	21268398	+	CDS
3	LOC_Os09g27030	oryzain gamma chain precursor, putative, expressed	gene	oryzain gamma chain precursor, putative, expressed	chr9	16438140	16442630	+	CDS
3	LOC_Os03g10790	cytochrome b5-like Heme/Steroid binding domain containing protein, expressed	gene	cytochrome b5-like Heme/Steroid binding domain containing protein, expressed	chr3	5516532	5521391	+	CDS,promoter
3	LOC_Os01g60270	homeobox domain containing protein, expressed	gene	homeobox domain containing protein, expressed	chr1	34861444	34865102	+	CDS,three_prime_UTR
3	LOC_Os09g26004	expressed protein	gene	expressed protein	chr9	15627324	15630558	-	three_prime_UTR
3	LOC_Os08g44770	copper/zinc superoxide dismutase, putative, expressed	gene	copper/zinc superoxide dismutase, putative, expressed	chr8	28129623	28132848	+	CDS
3	LOC_Os03g39129	frigida, putative, expressed	gene	frigida, putative, expressed	chr3	21731498	21736595	+	CDS
3	LOC_Os07g41620	hypothetical protein	gene	hypothetical protein	chr7	24949491	24952804	-	CDS
3	LOC_Os06g07130	SHR5-receptor-like kinase, putative, expressed	gene	SHR5-receptor-like kinase, putative, expressed	chr6	3407661	3417592	+	CDS,three_prime_UTR,promoter
3	LOC_Os09g27580	potassium transporter, putative, expressed	gene	potassium transporter, putative, expressed	chr9	16753448	16758733	+	CDS
3	LOC_Os03g14540	UDP-glucuronate 4-epimerase, putative, expressed	gene	UDP-glucuronate 4-epimerase, putative, expressed	chr3	7888180	7890296	+	three_prime_UTR,downstream
3	LOC_Os03g40110	nop14-like family protein, expressed	gene	nop14-like family protein, expressed	chr3	22284190	22291069	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g53250	expressed protein	gene	expressed protein	chr3	30541696	30546622	-	CDS,three_prime_UTR
3	LOC_Os01g35050	early-responsive to dehydration protein-related, putative, expressed	gene	early-responsive to dehydration protein-related, putative, expressed	chr1	19393417	19404435	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g51880	GHMP kinases ATP-binding protein, putative, expressed	gene	GHMP kinases ATP-binding protein, putative, expressed	chr4	30579358	30585595	-	CDS,five_prime_UTR,three_prime_UTR
3	LOC_Os02g45240	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr2	27474394	27478618	-	CDS,three_prime_UTR
3	LOC_Os03g22610	peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed	gene	peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed	chr3	13029882	13034730	+	three_prime_UTR,CDS
3	LOC_Os05g26660	NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed	gene	NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed	chr5	15424841	15430762	-	CDS
3	LOC_Os03g01660	SKP1, putative, expressed	gene	SKP1, putative, expressed	chr3	404706	409150	-	CDS,three_prime_UTR
3	LOC_Os03g21620	AGC_AGC_other_RS6K_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed	gene	AGC_AGC_other_RS6K_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed	chr3	12338898	12343059	-	CDS
3	LOC_Os02g03100	oxidoreductase, aldo/keto reductase family protein, putative, expressed	gene	oxidoreductase, aldo/keto reductase family protein, putative, expressed	chr2	1227308	1230217	-	CDS,downstream
3	LOC_Os11g14020	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr11	7782233	7784192	-	CDS,promoter
3	LOC_Os02g12670	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr2	6616308	6623374	+	CDS
3	LOC_Os10g38020	expressed protein	gene	expressed protein	chr10	20289427	20293635	+	CDS,downstream
3	LOC_Os08g15030	aspartate carbamoyltransferase, putative, expressed	gene	aspartate carbamoyltransferase, putative, expressed	chr8	9070643	9074887	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g17820	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr8	10924222	10935214	+	CDS,promoter
3	LOC_Os02g48830	microtubule associated protein, putative, expressed	gene	microtubule associated protein, putative, expressed	chr2	29871380	29875589	+	CDS,promoter
3	LOC_Os07g37570	expressed protein	gene	expressed protein	chr7	22505557	22508213	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g15850	Leucine Rich Repeat family protein, expressed	gene	Leucine Rich Repeat family protein, expressed	chr9	9680879	9688737	+	CDS,downstream
3	LOC_Os04g41410	expressed protein	gene	expressed protein	chr4	24365407	24368261	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g06040	expressed protein	gene	expressed protein	chr6	2773438	2778880	-	CDS,three_prime_UTR
3	LOC_Os08g39050	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr8	24670416	24674030	+	three_prime_UTR,downstream
3	LOC_Os01g37870	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr1	21194353	21201916	+	CDS,three_prime_UTR
3	LOC_Os01g48444	OsIAA5 - Auxin-responsive Aux/IAA gene family member, expressed	gene	OsIAA5 - Auxin-responsive Aux/IAA gene family member, expressed	chr1	27776462	27779934	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g54910	GTP-binding protein typA/bipA, putative, expressed	gene	GTP-binding protein typA/bipA, putative, expressed	chr1	31574664	31582561	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g25624	expressed protein	gene	expressed protein	chr2	14973229	14976858	-	three_prime_UTR,promoter
3	LOC_Os09g25770	auxin-induced protein 5NG4, putative, expressed	gene	auxin-induced protein 5NG4, putative, expressed	chr9	15446548	15449011	-	CDS,three_prime_UTR
3	LOC_Os05g04550	CAMK_KIN1/SNF1/Nim1_like.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_KIN1/SNF1/Nim1_like.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr5	2113568	2117279	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g10480	expressed protein	gene	expressed protein	chr6	5392252	5405652	+	five_prime_UTR,CDS
3	LOC_Os10g28410	GA19388-PA, putative, expressed	gene	GA19388-PA, putative, expressed	chr10	14705187	14707814	-	CDS,three_prime_UTR
3	LOC_Os12g34860	phenylalanyl-tRNA synthetase, putative, expressed	gene	phenylalanyl-tRNA synthetase, putative, expressed	chr12	21187343	21192780	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g19331	expressed protein	gene	expressed protein	chr10	9789069	9791179	+	three_prime_UTR,downstream
3	LOC_Os05g30210	expressed protein	gene	expressed protein	chr5	17446304	17450405	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g49510	CAMK_CAMK_like.27 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.27 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr4	29346091	29351360	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g48770	OsSBeL1 - Putative Serine Beta-Lactamase homologue, expressed	gene	OsSBeL1 - Putative Serine Beta-Lactamase homologue, expressed	chr6	29515245	29522985	-	CDS
3	LOC_Os05g25850	superoxide dismutase, mitochondrial precursor, putative, expressed	gene	superoxide dismutase, mitochondrial precursor, putative, expressed	chr5	14989272	14994057	+	CDS,three_prime_UTR
3	LOC_Os09g36300	OsLonP4 - Putative Lon protease homologue, expressed	gene	OsLonP4 - Putative Lon protease homologue, expressed	chr9	20945434	20952455	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g51320	GASR8 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed	gene	GASR8 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed	chr6	31081748	31083113	+	three_prime_UTR,downstream
3	LOC_Os08g15590	Leucine rich repeat N-terminal domain containing protein, putative	gene	Leucine rich repeat N-terminal domain containing protein, putative	chr8	9474623	9480070	-	CDS
3	LOC_Os01g21440	expressed protein	gene	expressed protein	chr1	11969702	11971542	+	three_prime_UTR,downstream
3	LOC_Os01g11040	SCAR-like protein 2, putative, expressed	gene	SCAR-like protein 2, putative, expressed	chr1	5889605	5897224	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g32630	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr5	19046046	19050269	-	CDS,three_prime_UTR
3	LOC_Os11g11370	expressed protein	gene	expressed protein	chr11	6304253	6306549	+	CDS,three_prime_UTR
3	LOC_Os05g24930	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr5	14370510	14374947	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g47834	expressed protein	gene	expressed protein	chr6	28949825	28952458	+	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g17170	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr3	9552121	9554167	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g01110	translation initiation factor IF-3, putative, expressed	gene	translation initiation factor IF-3, putative, expressed	chr2	59280	64726	+	CDS
3	LOC_Os03g51510	ribosomal protein L6, putative, expressed	gene	ribosomal protein L6, putative, expressed	chr3	29455962	29458858	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os02g32490	AMP-binding enzyme, putative, expressed	gene	AMP-binding enzyme, putative, expressed	chr2	19213151	19219283	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g22484	RGH2B, putative, expressed	gene	RGH2B, putative, expressed	chr10	11578484	11588141	-	CDS,three_prime_UTR
3	LOC_Os08g20270	MEMO1, putative, expressed	gene	MEMO1, putative, expressed	chr8	12169587	12176366	+	CDS
3	LOC_Os02g54500	WD40-like, putative, expressed	gene	WD40-like, putative, expressed	chr2	33366546	33374960	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os12g39340	glycosyl transferase, group 1 domain containing protein, expressed	gene	glycosyl transferase, group 1 domain containing protein, expressed	chr12	24171221	24174729	-	CDS,three_prime_UTR
3	LOC_Os01g15979	gb protein, putative, expressed	gene	gb protein, putative, expressed	chr1	8987867	8991581	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g45810	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr2	27900420	27903520	-	three_prime_UTR
3	LOC_Os01g37670	OsFBX15 - F-box domain containing protein, expressed	gene	OsFBX15 - F-box domain containing protein, expressed	chr1	21067462	21069172	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g58050	expressed protein	gene	expressed protein	chr4	34388308	34389954	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g67054	calreticulin precursor protein, putative, expressed	gene	calreticulin precursor protein, putative, expressed	chr1	38929326	38933727	-	CDS,three_prime_UTR
3	LOC_Os04g59394	expressed protein	gene	expressed protein	chr4	35125144	35130958	+	CDS,three_prime_UTR
3	LOC_Os06g04040	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr6	1647596	1653301	+	CDS,three_prime_UTR
3	LOC_Os07g39870	eukaryotic peptide chain release factor subunit 1-1, putative, expressed	gene	eukaryotic peptide chain release factor subunit 1-1, putative, expressed	chr7	23903926	23908021	-	CDS,three_prime_UTR
3	LOC_Os03g55380	oxidoreductase, putative, expressed	gene	oxidoreductase, putative, expressed	chr3	31496588	31500631	+	CDS,downstream
3	LOC_Os05g45850	expressed protein	gene	expressed protein	chr5	26498297	26504006	+	three_prime_UTR,promoter
3	LOC_Os06g02028	eyes absent homolog 4, putative, expressed	gene	eyes absent homolog 4, putative, expressed	chr6	586544	591230	+	CDS,three_prime_UTR
3	LOC_Os02g49060	amino acid transporter, putative, expressed	gene	amino acid transporter, putative, expressed	chr2	29985917	29992936	+	three_prime_UTR,downstream
3	LOC_Os09g19820	aminopeptidase, putative, expressed	gene	aminopeptidase, putative, expressed	chr9	11861270	11865458	+	CDS,three_prime_UTR
3	LOC_Os10g17510	transposon protein, putative, Ac/Ds sub-class	gene	transposon protein, putative, Ac/Ds sub-class	chr10	8761255	8765553	+	CDS
3	LOC_Os08g44820	no apical meristem protein, putative, expressed	gene	no apical meristem protein, putative, expressed	chr8	28141867	28146558	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g44520	OsSub19 - Putative Subtilisin homologue, expressed	gene	OsSub19 - Putative Subtilisin homologue, expressed	chr2	26946987	26964397	+	CDS,promoter
3	LOC_Os05g03174	glycosyltransferase family 43 protein, putative, expressed	gene	glycosyltransferase family 43 protein, putative, expressed	chr5	1278875	1285588	+	CDS
3	LOC_Os01g66280	transcriptional regulator, putative, expressed	gene	transcriptional regulator, putative, expressed	chr1	38490228	38493091	-	CDS,three_prime_UTR
3	LOC_Os02g32110	exostosin family domain containing protein, expressed	gene	exostosin family domain containing protein, expressed	chr2	18966946	18970500	-	CDS
3	LOC_Os06g19640	39S ribosomal protein L46, mitochondrial precursor, putative, expressed	gene	39S ribosomal protein L46, mitochondrial precursor, putative, expressed	chr6	11203784	11207080	-	CDS,three_prime_UTR
3	LOC_Os11g34950	expressed protein	gene	expressed protein	chr11	20016546	20021977	-	CDS
3	LOC_Os10g41534	ICE-like protease p20 domain containing protein, expressed	gene	ICE-like protease p20 domain containing protein, expressed	chr10	22244483	22248770	+	three_prime_UTR
3	LOC_Os04g54410	expressed protein	gene	expressed protein	chr4	32185338	32193156	-	CDS,three_prime_UTR,downstream
3	LOC_Os09g06970	transport protein particle component, Bet3, domain containing protein, expressed	gene	transport protein particle component, Bet3, domain containing protein, expressed	chr9	3368499	3375004	+	three_prime_UTR
3	LOC_Os05g36184	expressed protein	gene	expressed protein	chr5	21388949	21393276	-	CDS,three_prime_UTR
3	LOC_Os02g21520	chalcone isomerase 3, putative, expressed	gene	chalcone isomerase 3, putative, expressed	chr2	12765278	12772118	+	CDS,three_prime_UTR
3	LOC_Os01g73230	syntaxin 6, putative, expressed	gene	syntaxin 6, putative, expressed	chr1	42446860	42449879	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g50500	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr3	28823880	28829889	+	three_prime_UTR
3	LOC_Os03g51050	peptide transporter PTR2, putative, expressed	gene	peptide transporter PTR2, putative, expressed	chr3	29178058	29183413	-	CDS
3	LOC_Os06g01360	homogentisate 1,2-dioxygenase, putative, expressed	gene	homogentisate 1,2-dioxygenase, putative, expressed	chr6	213967	217294	-	CDS,three_prime_UTR
3	LOC_Os05g25840	 ELMO/CED-12 family protein, putative, expressed	gene	 ELMO/CED-12 family protein, putative, expressed	chr5	14983339	14987301	+	CDS,three_prime_UTR
3	LOC_Os01g55950	acetamidase, putative, expressed	gene	acetamidase, putative, expressed	chr1	32225841	32228588	-	CDS,promoter
3	LOC_Os01g08830	OsFBDUF1 - F-box and DUF domain containing protein, expressed	gene	OsFBDUF1 - F-box and DUF domain containing protein, expressed	chr1	4433089	4436971	+	CDS,three_prime_UTR,five_prime_UTR
3	LOC_Os07g40460	prefoldin, putative, expressed	gene	prefoldin, putative, expressed	chr7	24242952	24246480	+	CDS,three_prime_UTR
3	LOC_Os10g14180	expressed protein	gene	expressed protein	chr10	7700830	7712452	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g42740	IBR domain containing protein, putative, expressed	gene	IBR domain containing protein, putative, expressed	chr8	27044655	27052936	+	CDS,three_prime_UTR
3	LOC_Os05g44210	trehalose-6-phosphate synthase, putative, expressed	gene	trehalose-6-phosphate synthase, putative, expressed	chr5	25651141	25659510	+	five_prime_UTR,CDS
3	LOC_Os08g43040	transferase family protein, putative, expressed	gene	transferase family protein, putative, expressed	chr8	27199557	27202200	+	CDS,three_prime_UTR
3	LOC_Os12g05370	RING-H2 finger protein, putative, expressed	gene	RING-H2 finger protein, putative, expressed	chr12	2425130	2428788	-	CDS
3	LOC_Os11g35200	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr11	20171544	20176506	-	CDS,promoter,downstream
3	LOC_Os04g33260	expressed protein	gene	expressed protein	chr4	19945307	19950265	-	CDS,promoter
3	LOC_Os07g49320	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr7	29533477	29544706	+	CDS,downstream
3	LOC_Os01g19760	expressed protein	gene	expressed protein	chr1	11210821	11220376	+	CDS,three_prime_UTR
3	LOC_Os01g49380	lipase, putative, expressed	gene	lipase, putative, expressed	chr1	28382976	28386114	-	CDS,three_prime_UTR
3	LOC_Os03g60650	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr3	34467564	34471240	-	CDS,three_prime_UTR
3	LOC_Os05g34640	PHD finger protein, putative, expressed	gene	PHD finger protein, putative, expressed	chr5	20479811	20484555	+	CDS,downstream
3	LOC_Os02g35700	nucleoside diphosphate kinase, putative, expressed	gene	nucleoside diphosphate kinase, putative, expressed	chr2	21447248	21450026	+	three_prime_UTR,CDS
3	LOC_Os03g62280	expressed protein	gene	expressed protein	chr3	35277867	35280258	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os02g10350	MLO domain containing protein, putative, expressed	gene	MLO domain containing protein, putative, expressed	chr2	5442079	5447380	+	CDS
3	LOC_Os06g16140	expressed protein	gene	expressed protein	chr6	9185473	9188864	+	CDS
3	LOC_Os07g19530	peptidase, putative, expressed	gene	peptidase, putative, expressed	chr7	11550095	11569308	-	CDS
3	LOC_Os09g02710	CBS domain containing membrane protein, putative, expressed	gene	CBS domain containing membrane protein, putative, expressed	chr9	1220088	1223778	-	CDS
3	LOC_Os03g52470	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr3	30102948	30107881	+	CDS,three_prime_UTR
3	LOC_Os02g42860	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr2	25761340	25768594	+	CDS,three_prime_UTR
3	LOC_Os04g37520	extracellular ligand-gated ion channel, putative, expressed	gene	extracellular ligand-gated ion channel, putative, expressed	chr4	22149894	22152309	+	three_prime_UTR,downstream
3	LOC_Os02g52290	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	chr2	32011864	32014026	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g37006	protein of unknown function domain containing protein, expressed	gene	protein of unknown function domain containing protein, expressed	chr9	21343051	21346171	-	CDS,three_prime_UTR,downstream
3	LOC_Os12g08210	expressed protein	gene	expressed protein	chr12	4190337	4192710	-	three_prime_UTR,promoter
3	LOC_Os05g28630	leaf senescence related protein, putative, expressed	gene	leaf senescence related protein, putative, expressed	chr5	16721528	16726293	-	CDS
3	LOC_Os02g57120	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr2	34975175	34984010	+	five_prime_UTR,CDS
3	LOC_Os04g39950	expressed protein	gene	expressed protein	chr4	23600365	23602848	-	three_prime_UTR,promoter
3	LOC_Os05g05200	O-acyltransferase, putative, expressed	gene	O-acyltransferase, putative, expressed	chr5	2528880	2536229	-	CDS,three_prime_UTR
3	LOC_Os11g06420	OsFBT13 - F-box and tubby domain containing protein, expressed	gene	OsFBT13 - F-box and tubby domain containing protein, expressed	chr11	3094367	3098579	+	CDS
3	LOC_Os09g32944	OsSPL18 - SBP-box gene family member, expressed	gene	OsSPL18 - SBP-box gene family member, expressed	chr9	19643053	19647823	+	CDS,downstream
3	LOC_Os09g32040	no apical meristem protein, putative, expressed	gene	no apical meristem protein, putative, expressed	chr9	19121415	19124621	-	CDS,three_prime_UTR,downstream
3	LOC_Os07g01860	expressed protein	gene	expressed protein	chr7	514825	520967	+	CDS,downstream
3	LOC_Os02g56980	cytidylyltransferase domain containing protein, expressed	gene	cytidylyltransferase domain containing protein, expressed	chr2	34909922	34912117	-	three_prime_UTR,promoter,downstream
3	LOC_Os04g41380	Leucine Rich Repeat family protein, expressed	gene	Leucine Rich Repeat family protein, expressed	chr4	24356816	24360498	+	CDS,promoter
3	LOC_Os02g48400	expressed protein	gene	expressed protein	chr2	29629988	29633482	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g13694	expressed protein	gene	expressed protein	chr10	7450715	7457638	+	CDS
3	LOC_Os12g05680	transcription factor, putative, expressed	gene	transcription factor, putative, expressed	chr12	2604717	2611492	-	CDS
3	LOC_Os02g04420	expressed protein	gene	expressed protein	chr2	1946071	1949419	-	three_prime_UTR
3	LOC_Os01g43130	DEAD/DEAH box helicase, putative, expressed	gene	DEAD/DEAH box helicase, putative, expressed	chr1	24601181	24604484	+	CDS,promoter
3	LOC_Os03g11210	DUF538 domain containing protein, putative, expressed	gene	DUF538 domain containing protein, putative, expressed	chr3	5768927	5771647	+	three_prime_UTR,downstream
3	LOC_Os01g65400	DNA polymerase I, putative, expressed	gene	DNA polymerase I, putative, expressed	chr1	37954045	37957958	-	three_prime_UTR
3	LOC_Os02g28830	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr2	17040591	17046161	-	CDS
3	LOC_Os02g50620	dehydrogenase E1 component domain containing protein, expressed	gene	dehydrogenase E1 component domain containing protein, expressed	chr2	30912888	30917095	-	CDS,three_prime_UTR
3	LOC_Os08g05790	caffeoyl-CoA O-methyltransferase, putative, expressed	gene	caffeoyl-CoA O-methyltransferase, putative, expressed	chr8	3100982	3104450	+	three_prime_UTR,CDS,downstream
3	LOC_Os11g04220	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr11	1717965	1734148	-	CDS,promoter
3	LOC_Os09g17830	protein transport protein Sec61 subunit alpha, putative	gene	protein transport protein Sec61 subunit alpha, putative	chr9	10905211	10907525	-	CDS,promoter
3	LOC_Os07g45194	expressed protein	gene	expressed protein	chr7	26994081	27000032	-	CDS
3	LOC_Os10g30370	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr10	15709240	15716786	+	CDS
3	LOC_Os06g12539	hypothetical protein	gene	hypothetical protein	chr6	6795599	6797470	+	five_prime_UTR,CDS,promoter
3	LOC_Os04g28100	spotted leaf 11, putative, expressed	gene	spotted leaf 11, putative, expressed	chr4	16418512	16421967	-	CDS,three_prime_UTR
3	LOC_Os01g01700	anaphase-promoting complex subunit 11, putative, expressed	gene	anaphase-promoting complex subunit 11, putative, expressed	chr1	370831	373470	+	three_prime_UTR,promoter,downstream
3	LOC_Os06g05368	expressed protein	gene	expressed protein	chr6	2417702	2421486	+	three_prime_UTR
3	LOC_Os03g06710	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr3	3406985	3412954	+	CDS,downstream
3	LOC_Os07g32900	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr7	19667385	19672215	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g41370	WD repeat-containing protein 8, putative, expressed	gene	WD repeat-containing protein 8, putative, expressed	chr10	22165361	22170551	-	CDS
3	LOC_Os01g42060	expressed protein	gene	expressed protein	chr1	23845997	23849282	+	CDS,promoter
3	LOC_Os02g24354	pyridoxal-dependent decarboxylase protein, putative, expressed	gene	pyridoxal-dependent decarboxylase protein, putative, expressed	chr2	14118563	14126214	-	CDS
3	LOC_Os03g30000	glycosyl transferase 8 domain containing protein, putative, expressed	gene	glycosyl transferase 8 domain containing protein, putative, expressed	chr3	17107939	17112585	-	CDS,three_prime_UTR
3	LOC_Os07g39630	calcium-binding protein, putative, expressed	gene	calcium-binding protein, putative, expressed	chr7	23752114	23759713	+	CDS,three_prime_UTR
3	LOC_Os02g53210	expressed protein	gene	expressed protein	chr2	32569441	32574848	-	CDS,three_prime_UTR
3	LOC_Os12g03470	alpha-N-arabinofuranosidase A, putative, expressed	gene	alpha-N-arabinofuranosidase A, putative, expressed	chr12	1358572	1365649	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g20640	expressed protein	gene	expressed protein	chr3	11676608	11678929	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g32930	bile acid sodium symporter, putative, expressed	gene	bile acid sodium symporter, putative, expressed	chr2	19543855	19550635	+	CDS
3	LOC_Os07g06570	receptor protein kinase CRINKLY4 precursor, putative, expressed	gene	receptor protein kinase CRINKLY4 precursor, putative, expressed	chr7	3189111	3191321	-	three_prime_UTR,promoter
3	LOC_Os01g21320	NAD dependent epimerase/dehydratase family domain containing protein, expressed	gene	NAD dependent epimerase/dehydratase family domain containing protein, expressed	chr1	11905838	11909890	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g29420	queuine tRNA-ribosyltransferase, putative, expressed	gene	queuine tRNA-ribosyltransferase, putative, expressed	chr9	17873475	17879226	+	CDS,three_prime_UTR
3	LOC_Os02g42370	receptor-like protein kinase 2 precursor, putative, expressed	gene	receptor-like protein kinase 2 precursor, putative, expressed	chr2	25482215	25485863	+	CDS,three_prime_UTR
3	LOC_Os05g33310	oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed	gene	oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed	chr5	19463126	19466464	-	CDS,downstream
3	LOC_Os08g31750	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr8	19670019	19673915	-	CDS,three_prime_UTR
3	LOC_Os06g14450	exo70 exocyst complex subunit family protein, putative, expressed	gene	exo70 exocyst complex subunit family protein, putative, expressed	chr6	8115250	8118851	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os03g51240	glycosyl hydrolases family 17, putative, expressed	gene	glycosyl hydrolases family 17, putative, expressed	chr3	29305774	29308847	+	three_prime_UTR,promoter,downstream
3	LOC_Os06g05880	profilin domain containing protein, expressed	gene	profilin domain containing protein, expressed	chr6	2689214	2692053	+	CDS,three_prime_UTR
3	LOC_Os01g33070	pentatricopeptide repeat protein PPR868-14, putative	gene	pentatricopeptide repeat protein PPR868-14, putative	chr1	18175489	18176830	+	CDS,downstream
3	LOC_Os11g14180	expressed protein	gene	expressed protein	chr11	7927355	7931543	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g41730	OsPOP16 - Putative Prolyl Oligopeptidase homologue, expressed	gene	OsPOP16 - Putative Prolyl Oligopeptidase homologue, expressed	chr7	25006229	25011600	+	CDS
3	LOC_Os02g04230	CGMC_MAPKCMGC_2.7 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	gene	CGMC_MAPKCMGC_2.7 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	chr2	1850954	1858237	-	five_prime_UTR,CDS
3	LOC_Os02g17250	expressed protein	gene	expressed protein	chr2	9888493	9893606	-	CDS,three_prime_UTR
3	LOC_Os09g39690	protein binding protein, putative, expressed	gene	protein binding protein, putative, expressed	chr9	22773034	22777111	+	CDS,three_prime_UTR
3	LOC_Os09g25900	CSLC2 - cellulose synthase-like family C, expressed	gene	CSLC2 - cellulose synthase-like family C, expressed	chr9	15545365	15548202	-	CDS,three_prime_UTR
3	LOC_Os04g42520	phosphoribosyl transferase, putative, expressed	gene	phosphoribosyl transferase, putative, expressed	chr4	24980551	24985625	+	CDS,three_prime_UTR
3	LOC_Os02g44642	STE_MEKK_ste11_MAP3K.10 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	gene	STE_MEKK_ste11_MAP3K.10 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	chr2	27043019	27056086	-	CDS,three_prime_UTR
3	LOC_Os08g10250	SHR5-receptor-like kinase, putative, expressed	gene	SHR5-receptor-like kinase, putative, expressed	chr8	5950167	5957765	+	five_prime_UTR,CDS,promoter
3	LOC_Os01g17279	exonuclease, putative, expressed	gene	exonuclease, putative, expressed	chr1	9935729	9946916	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g06020	homeobox domain containing protein, expressed	gene	homeobox domain containing protein, expressed	chr11	2833894	2840422	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g39280	C2 domain containing protein, putative	gene	C2 domain containing protein, putative	chr2	23714568	23720311	+	CDS
3	LOC_Os09g20910	conserved hypothetical protein	gene	conserved hypothetical protein	chr9	12581818	12589856	-	CDS,promoter
3	LOC_Os08g23730	class I glutamine amidotransferase, putative, expressed	gene	class I glutamine amidotransferase, putative, expressed	chr8	14354255	14358335	+	CDS
3	LOC_Os11g38900	histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed	gene	histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed	chr11	22692343	22698129	+	CDS,three_prime_UTR
3	LOC_Os01g03160	xylosyltransferase, putative, expressed	gene	xylosyltransferase, putative, expressed	chr1	1231473	1235942	+	CDS,three_prime_UTR
3	LOC_Os02g48110	DnaK family protein, putative, expressed	gene	DnaK family protein, putative, expressed	chr2	29446070	29451999	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os11g43934	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr11	26053323	26059421	-	three_prime_UTR
3	LOC_Os10g35436	Rf1, mitochondrial precursor, putative	gene	Rf1, mitochondrial precursor, putative	chr10	18864247	18871130	+	three_prime_UTR,downstream
3	LOC_Os02g54650	diacylglycerol kinase, putative, expressed	gene	diacylglycerol kinase, putative, expressed	chr2	33470359	33478149	-	CDS,three_prime_UTR
3	LOC_Os02g21460	uncharacterized protein yqjG, putative, expressed	gene	uncharacterized protein yqjG, putative, expressed	chr2	12731575	12735310	-	CDS,three_prime_UTR
3	LOC_Os06g18900	cadmium tolerance factor, putative, expressed	gene	cadmium tolerance factor, putative, expressed	chr6	10737693	10741349	-	CDS
3	LOC_Os03g61710	GHMP kinases ATP-binding protein, putative, expressed	gene	GHMP kinases ATP-binding protein, putative, expressed	chr3	34967575	34973282	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g36070	signal peptide peptidase domain containing protein, expressed	gene	signal peptide peptidase domain containing protein, expressed	chr5	21307597	21314046	+	CDS,three_prime_UTR
3	LOC_Os02g09740	STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed	gene	STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed	chr2	5019762	5028025	+	CDS
3	LOC_Os03g62720	exosome complex exonuclease, putative, expressed	gene	exosome complex exonuclease, putative, expressed	chr3	35486927	35490653	+	CDS,three_prime_UTR
3	LOC_Os09g15590	OsFBX316 - F-box domain containing protein, expressed	gene	OsFBX316 - F-box domain containing protein, expressed	chr9	9517483	9523803	+	CDS,three_prime_UTR
3	LOC_Os09g26190	CBS domain containing protein, expressed	gene	CBS domain containing protein, expressed	chr9	15789767	15799950	+	CDS
3	LOC_Os03g14580	expressed protein	gene	expressed protein	chr3	7910631	7913227	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g06590	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr1	3098428	3104235	-	CDS,five_prime_UTR
3	LOC_Os01g18800	CAMK_KIN1/SNF1/Nim1_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_KIN1/SNF1/Nim1_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr1	10621771	10626528	+	CDS,three_prime_UTR
3	LOC_Os04g51970	synaptic vesicle 2-related protein, putative, expressed	gene	synaptic vesicle 2-related protein, putative, expressed	chr4	30667167	30670929	-	five_prime_UTR,CDS,promoter
3	LOC_Os06g39640	PINHEAD, putative, expressed	gene	PINHEAD, putative, expressed	chr6	23539785	23546202	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g51230	conserved hypothetical protein	gene	conserved hypothetical protein	chr6	30996881	31002886	+	CDS,downstream
3	LOC_Os02g54490	nucleotide binding protein, putative, expressed	gene	nucleotide binding protein, putative, expressed	chr2	33358394	33365118	+	CDS,downstream
3	LOC_Os10g24070	expressed protein	gene	expressed protein	chr10	12256253	12265651	+	CDS,three_prime_UTR
3	LOC_Os03g64219	OTU-like cysteine protease family protein, putative, expressed	gene	OTU-like cysteine protease family protein, putative, expressed	chr3	36279222	36282085	-	three_prime_UTR,CDS,promoter
3	LOC_Os01g15850	expressed protein	gene	expressed protein	chr1	8924072	8928646	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g02690	expressed protein	gene	expressed protein	chr2	1008399	1011875	-	CDS,three_prime_UTR
3	LOC_Os01g39820	conserved hypothetical protein	gene	conserved hypothetical protein	chr1	22454095	22455302	-	CDS,promoter
3	LOC_Os03g24020	ribosomal protein L6, putative, expressed	gene	ribosomal protein L6, putative, expressed	chr3	13626278	13629059	-	CDS
3	LOC_Os02g42330	nitrilase, putative, expressed	gene	nitrilase, putative, expressed	chr2	25453528	25456861	+	CDS,three_prime_UTR,promoter
3	LOC_Os10g37330	oxidoreductase, aldo/keto reductase family protein, putative, expressed	gene	oxidoreductase, aldo/keto reductase family protein, putative, expressed	chr10	19926268	19930456	+	CDS,three_prime_UTR
3	LOC_Os02g52780	bZIP transcription factor, putative, expressed	gene	bZIP transcription factor, putative, expressed	chr2	32270722	32275784	-	CDS,three_prime_UTR
3	LOC_Os08g02860	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr8	1204879	1208753	-	three_prime_UTR
3	LOC_Os02g13570	kinesin motor protein-related, putative, expressed	gene	kinesin motor protein-related, putative, expressed	chr2	7278420	7280993	-	CDS,promoter,downstream
3	LOC_Os03g29180	ubiquinone biosynthesis protein COQ9, mitochondrial precursor, putative, expressed	gene	ubiquinone biosynthesis protein COQ9, mitochondrial precursor, putative, expressed	chr3	16578796	16584798	+	CDS
3	LOC_Os01g05430	OsRhmbd1 - Putative Rhomboid homologue, expressed	gene	OsRhmbd1 - Putative Rhomboid homologue, expressed	chr1	2567051	2569029	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g01420	expressed protein	gene	expressed protein	chr1	208771	213229	+	CDS,three_prime_UTR
3	LOC_Os06g42640	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr6	25640391	25644230	-	CDS,three_prime_UTR
3	LOC_Os09g08710	expressed protein	gene	expressed protein	chr9	4576706	4579686	+	three_prime_UTR,downstream
3	LOC_Os07g31540	ubiquitin family protein, putative, expressed	gene	ubiquitin family protein, putative, expressed	chr7	18716041	18724775	-	CDS
3	LOC_Os05g32270	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr5	18749873	18755182	+	CDS,three_prime_UTR
3	LOC_Os04g51380	protein-S-isoprenylcysteine O-methyltransferase. tax, putative, expressed	gene	protein-S-isoprenylcysteine O-methyltransferase. tax, putative, expressed	chr4	30243065	30246622	+	three_prime_UTR
3	LOC_Os10g40130	Mur ligase family protein, putative, expressed	gene	Mur ligase family protein, putative, expressed	chr10	21411210	21414793	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g46450	helicase conserved C-terminal domain containing protein, expressed	gene	helicase conserved C-terminal domain containing protein, expressed	chr2	28288126	28294011	-	CDS,three_prime_UTR
3	LOC_Os10g26520	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr10	13752245	13758304	+	CDS,three_prime_UTR
3	LOC_Os01g70090	enoyl-CoA hydratase/isomerase family protein, putative, expressed	gene	enoyl-CoA hydratase/isomerase family protein, putative, expressed	chr1	40562487	40565397	+	CDS,three_prime_UTR
3	LOC_Os01g73300	VAMP-like protein YKT62, putative, expressed	gene	VAMP-like protein YKT62, putative, expressed	chr1	42478619	42482328	-	CDS,downstream
3	LOC_Os12g43940	ankyrin repeat domain-containing protein, putative, expressed	gene	ankyrin repeat domain-containing protein, putative, expressed	chr12	27232877	27237841	+	CDS,promoter,downstream
3	LOC_Os08g04420	tyrosine protein kinase domain containing protein, putative, expressed	gene	tyrosine protein kinase domain containing protein, putative, expressed	chr8	2158515	2163022	-	CDS,promoter
3	LOC_Os12g32210	autophagy-related protein 10, putative, expressed	gene	autophagy-related protein 10, putative, expressed	chr12	19412188	19418666	+	CDS,three_prime_UTR
3	LOC_Os01g51890	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	gene	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	chr1	29829077	29835193	+	CDS
3	LOC_Os05g43360	NADH dehydrogenase flavoprotein 2, mitochondrial precursor, putative, expressed	gene	NADH dehydrogenase flavoprotein 2, mitochondrial precursor, putative, expressed	chr5	25151953	25155281	+	CDS,three_prime_UTR
3	LOC_Os09g19136	conserved hypothetical protein	gene	conserved hypothetical protein	chr9	11416019	11422569	+	CDS
3	LOC_Os03g25770	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr3	14750052	14753600	-	CDS,three_prime_UTR
3	LOC_Os01g45520	D-mannose binding lectin family protein	gene	D-mannose binding lectin family protein	chr1	25835107	25838939	+	CDS,downstream
3	LOC_Os07g03160	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr7	1227871	1237133	-	CDS
3	LOC_Os06g44540	HOTHEAD precursor, putative, expressed	gene	HOTHEAD precursor, putative, expressed	chr6	26903394	26907178	+	CDS
3	LOC_Os07g33300	expressed protein	gene	expressed protein	chr7	19904032	19908635	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g28980	GPI transamidase component Gpi16 subunit family protein, putative, expressed	gene	GPI transamidase component Gpi16 subunit family protein, putative, expressed	chr11	16301344	16307108	+	CDS,three_prime_UTR
3	LOC_Os04g42920	dehydrogenase, putative, expressed	gene	dehydrogenase, putative, expressed	chr4	25204198	25210406	+	CDS,three_prime_UTR,promoter
3	LOC_Os04g53530	expressed protein	gene	expressed protein	chr4	31710147	31715587	+	CDS,three_prime_UTR
3	LOC_Os04g08034	ZOS4-02 - C2H2 zinc finger protein, expressed	gene	ZOS4-02 - C2H2 zinc finger protein, expressed	chr4	4270491	4286303	+	CDS,three_prime_UTR
3	LOC_Os02g03000	division protein, putative, expressed	gene	division protein, putative, expressed	chr2	1178839	1182756	-	CDS,three_prime_UTR
3	LOC_Os04g56450	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr4	33463829	33468767	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g40290	KH domain-containing protein, putative, expressed	gene	KH domain-containing protein, putative, expressed	chr5	23610169	23614751	-	CDS,three_prime_UTR
3	LOC_Os08g38092	abhydrolase domain-containing protein FAM108C1, putative, expressed	gene	abhydrolase domain-containing protein FAM108C1, putative, expressed	chr8	24127214	24132002	-	CDS
3	LOC_Os05g05720	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr5	2852821	2859249	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g17000	NAD dependent epimerase/dehydratase family domain containing protein, expressed	gene	NAD dependent epimerase/dehydratase family domain containing protein, expressed	chr3	9444209	9447639	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g46420	expressed protein	gene	expressed protein	chr5	26837484	26838894	+	five_prime_UTR,CDS,downstream
3	LOC_Os03g36920	disease resistance protein, putative, expressed	gene	disease resistance protein, putative, expressed	chr3	20484416	20489746	-	CDS,downstream
3	LOC_Os03g23050	expressed protein	gene	expressed protein	chr3	13318646	13325546	+	CDS
3	LOC_Os09g30220	disease resistance protein RPM1, putative, expressed	gene	disease resistance protein RPM1, putative, expressed	chr9	18390868	18396838	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os01g70250	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr1	40673848	40676798	-	CDS,promoter
3	LOC_Os10g32840	enzyme of the cupin superfamily protein, putative, expressed	gene	enzyme of the cupin superfamily protein, putative, expressed	chr10	17119921	17120891	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g33300	tat pathway signal sequence family protein, expressed	gene	tat pathway signal sequence family protein, expressed	chr5	19451786	19454906	+	CDS,three_prime_UTR
3	LOC_Os03g11650	ATMAP70 protein, putative, expressed	gene	ATMAP70 protein, putative, expressed	chr3	6078158	6083525	+	CDS,three_prime_UTR,promoter
3	LOC_Os12g12110	hypothetical protein	gene	hypothetical protein	chr12	6639548	6642074	+	CDS,promoter
3	LOC_Os01g71240	calcium-transporting ATPase, plasma membrane-type, putative, expressed	gene	calcium-transporting ATPase, plasma membrane-type, putative, expressed	chr1	41218994	41226768	+	three_prime_UTR,promoter,downstream
3	LOC_Os12g01950	expressed protein	gene	expressed protein	chr12	561988	564823	+	CDS,three_prime_UTR
3	LOC_Os12g08670	C2 domain containing protein	gene	C2 domain containing protein	chr12	4396140	4399628	+	CDS
3	LOC_Os07g07240	ubiquitin-conjugating enzyme, putative, expressed	gene	ubiquitin-conjugating enzyme, putative, expressed	chr7	3585108	3592894	-	three_prime_UTR
3	LOC_Os08g01030	metal cation transporter, putative, expressed	gene	metal cation transporter, putative, expressed	chr8	17912	23200	-	CDS,downstream
3	LOC_Os07g08120	BTBT2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed	gene	BTBT2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed	chr7	4117355	4122593	+	CDS,three_prime_UTR
3	LOC_Os01g13770	DUF250 domain containing protein, putative, expressed	gene	DUF250 domain containing protein, putative, expressed	chr1	7717189	7721451	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g67920	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr1	39466253	39472795	-	CDS,three_prime_UTR
3	LOC_Os05g34210	expressed protein	gene	expressed protein	chr5	20181432	20185134	-	CDS
3	LOC_Os08g30634	DC1 domain containing protein, expressed	gene	DC1 domain containing protein, expressed	chr8	18873687	18889601	-	CDS,three_prime_UTR
3	LOC_Os01g42820	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr1	24367680	24371160	-	three_prime_UTR,promoter
3	LOC_Os01g68800	expressed protein	gene	expressed protein	chr1	39957505	39958579	+	three_prime_UTR,promoter,downstream
3	LOC_Os08g40560	ZOS8-11 - C2H2 zinc finger protein, expressed	gene	ZOS8-11 - C2H2 zinc finger protein, expressed	chr8	25673972	25679697	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g46980	vacuolar ATP synthase subunit E, putative, expressed	gene	vacuolar ATP synthase subunit E, putative, expressed	chr1	26810805	26815683	+	CDS
3	LOC_Os07g36770	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr7	22028092	22033867	-	CDS,downstream
3	LOC_Os07g37890	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr7	22724808	22730328	-	CDS,three_prime_UTR
3	LOC_Os08g13930	mannose-1-phosphate guanyltransferase, putative, expressed	gene	mannose-1-phosphate guanyltransferase, putative, expressed	chr8	8341185	8345671	-	CDS,three_prime_UTR
3	LOC_Os06g06170	expressed protein	gene	expressed protein	chr6	2858721	2860407	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g67100	expressed protein	gene	expressed protein	chr1	38952620	38959188	+	CDS,downstream
3	LOC_Os02g13660	meiosis 5, putative, expressed	gene	meiosis 5, putative, expressed	chr2	7323776	7325175	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g35720	expressed protein	gene	expressed protein	chr7	21390480	21392567	-	five_prime_UTR,three_prime_UTR,CDS
3	LOC_Os04g41220	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr4	24270087	24273911	+	three_prime_UTR
3	LOC_Os04g39970	vacuolar sorting protein 9 domain-containing protein, putative, expressed	gene	vacuolar sorting protein 9 domain-containing protein, putative, expressed	chr4	23605646	23607728	-	three_prime_UTR
3	LOC_Os07g33690	NBS-LRR type disease resistance protein Hom-F, putative, expressed	gene	NBS-LRR type disease resistance protein Hom-F, putative, expressed	chr7	20128655	20134328	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g58920	galactosyltransferase family protein, putative, expressed	gene	galactosyltransferase family protein, putative, expressed	chr3	33539333	33543934	-	CDS,three_prime_UTR
3	LOC_Os05g10580	cullin family domain containing protein, putative, expressed	gene	cullin family domain containing protein, putative, expressed	chr5	5756442	5760541	-	CDS,promoter
3	LOC_Os03g50570	expressed protein	gene	expressed protein	chr3	28868627	28873907	+	CDS,downstream
3	LOC_Os08g21330	formamidopyrimidine-DNA glycosylase, putative, expressed	gene	formamidopyrimidine-DNA glycosylase, putative, expressed	chr8	12708698	12717296	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g51480	cleavage and polyadenylation specificity factor, putative, expressed	gene	cleavage and polyadenylation specificity factor, putative, expressed	chr5	29449210	29457409	+	CDS,promoter
3	LOC_Os06g07200	syntaxin, putative, expressed	gene	syntaxin, putative, expressed	chr6	3444020	3447345	-	CDS
3	LOC_Os01g19548	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr1	11088027	11092963	-	CDS,three_prime_UTR
3	LOC_Os04g48030	heat stress transcription factor B-1, putative, expressed	gene	heat stress transcription factor B-1, putative, expressed	chr4	28389262	28391099	+	three_prime_UTR,downstream
3	LOC_Os06g36090	ABC-2 type transporter, putative, expressed	gene	ABC-2 type transporter, putative, expressed	chr6	21112222	21119651	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g47620	universal stress protein domain containing protein, putative, expressed	gene	universal stress protein domain containing protein, putative, expressed	chr7	28467396	28469581	+	three_prime_UTR,downstream
3	LOC_Os04g54330	acetyltransferase, GNAT family, putative, expressed	gene	acetyltransferase, GNAT family, putative, expressed	chr4	32153958	32157315	-	three_prime_UTR
3	LOC_Os07g38400	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr7	23080184	23084161	-	CDS,three_prime_UTR
3	LOC_Os07g46170	OsRhmbd13 - Putative Rhomboid homologue, expressed	gene	OsRhmbd13 - Putative Rhomboid homologue, expressed	chr7	27549838	27554222	+	CDS,three_prime_UTR,promoter
3	LOC_Os12g29580	AGC_PVPK_like_kin82y.19 - ACG kinases include homologs to PKA, PKG and PKC, expressed	gene	AGC_PVPK_like_kin82y.19 - ACG kinases include homologs to PKA, PKG and PKC, expressed	chr12	17622017	17626381	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g35360	vesicle tethering family protein, putative, expressed	gene	vesicle tethering family protein, putative, expressed	chr12	21460370	21467391	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g41130	osFTL6  FT-Like6 homologous to Flowering Locus T  gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed	gene	osFTL6  FT-Like6 homologous to Flowering Locus T  gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed	chr4	24205863	24210616	-	five_prime_UTR,downstream
3	LOC_Os01g32170	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr1	17604126	17606530	+	three_prime_UTR,downstream
3	LOC_Os11g24170	CC-NBS-LRR protein, putative	gene	CC-NBS-LRR protein, putative	chr11	13280265	13285901	-	CDS,promoter
3	LOC_Os01g06020	aspartyl-tRNA synthetase, putative, expressed	gene	aspartyl-tRNA synthetase, putative, expressed	chr1	2876647	2881686	+	CDS,three_prime_UTR
3	LOC_Os02g06430	DUF292 domain containing protein, expressed	gene	DUF292 domain containing protein, expressed	chr2	3212390	3216643	+	CDS,three_prime_UTR
3	LOC_Os04g54200	diacylglycerol kinase, putative, expressed	gene	diacylglycerol kinase, putative, expressed	chr4	32101553	32106351	+	CDS
3	LOC_Os06g49090	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr6	29743302	29749638	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g15350	Sel1 repeat domain containing protein, putative, expressed	gene	Sel1 repeat domain containing protein, putative, expressed	chr3	8397755	8404805	+	CDS,three_prime_UTR
3	LOC_Os03g21210	endoglucanase, putative, expressed	gene	endoglucanase, putative, expressed	chr3	12102799	12107152	-	CDS
3	LOC_Os07g12520	zinc ion binding protein, putative, expressed	gene	zinc ion binding protein, putative, expressed	chr7	7144544	7148832	+	CDS,three_prime_UTR
3	LOC_Os01g02860	expressed protein	gene	expressed protein	chr1	1001459	1006068	-	CDS
3	LOC_Os01g37910	vacuolar-processing enzyme precursor, putative, expressed	gene	vacuolar-processing enzyme precursor, putative, expressed	chr1	21229348	21233884	+	CDS,three_prime_UTR
3	LOC_Os11g32260	lysosomal alpha-mannosidase precursor, putative, expressed	gene	lysosomal alpha-mannosidase precursor, putative, expressed	chr11	18592038	18601536	+	CDS,three_prime_UTR
3	LOC_Os02g07200	protein-O-fucosyltransferase 1, putative, expressed	gene	protein-O-fucosyltransferase 1, putative, expressed	chr2	3702928	3705407	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g54200	expressed protein	gene	expressed protein	chr3	31070463	31072788	-	three_prime_UTR,promoter
3	LOC_Os03g27250	OsFBO14 - F-box and other domain containing protein, expressed	gene	OsFBO14 - F-box and other domain containing protein, expressed	chr3	15612874	15620237	+	CDS,downstream
3	LOC_Os03g01120	E1-E2 ATPase domain containing protein, expressed	gene	E1-E2 ATPase domain containing protein, expressed	chr3	88042	98403	+	CDS
3	LOC_Os02g46730	expressed protein	gene	expressed protein	chr2	28532789	28537155	+	CDS,promoter
3	LOC_Os02g57380	thioredoxin, putative, expressed	gene	thioredoxin, putative, expressed	chr2	35153086	35155675	+	CDS,three_prime_UTR,promoter
3	LOC_Os07g40260	eukaryotic aspartyl protease domain containing protein, expressed	gene	eukaryotic aspartyl protease domain containing protein, expressed	chr7	24128006	24136327	-	CDS,three_prime_UTR,downstream
3	LOC_Os11g10384	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr11	5627583	5636140	-	CDS,promoter
3	LOC_Os10g41760	chlorophyllide a oxygenase, chloroplast precursor, putative, expressed	gene	chlorophyllide a oxygenase, chloroplast precursor, putative, expressed	chr10	22401974	22405680	-	CDS
3	LOC_Os05g28190	ranBP1 domain containing protein, expressed	gene	ranBP1 domain containing protein, expressed	chr5	16445417	16449106	-	CDS
3	LOC_Os11g01270	mitochondrial substrate carrier family protein, putative, expressed	gene	mitochondrial substrate carrier family protein, putative, expressed	chr11	143166	148106	-	CDS
3	LOC_Os02g57370	DHHC zinc finger domain containing protein, expressed	gene	DHHC zinc finger domain containing protein, expressed	chr2	35149792	35152853	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g03180	Mad3/BUB1 homology region 1 domain containing protein, expressed	gene	Mad3/BUB1 homology region 1 domain containing protein, expressed	chr12	1211877	1215296	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g09360	glycine-rich protein, putative, expressed	gene	glycine-rich protein, putative, expressed	chr5	5238234	5250014	+	CDS
3	LOC_Os06g10580	cyclic nucleotide-gated ion channel, putative, expressed	gene	cyclic nucleotide-gated ion channel, putative, expressed	chr6	5460002	5470944	-	CDS
3	LOC_Os01g54424	expressed protein	gene	expressed protein	chr1	31312352	31316516	-	five_prime_UTR
3	LOC_Os01g21860	AGAP010768-PA, putative, expressed	gene	AGAP010768-PA, putative, expressed	chr1	12263885	12268059	+	CDS
3	LOC_Os01g46926	ubiquitin-conjugating enzyme, putative, expressed	gene	ubiquitin-conjugating enzyme, putative, expressed	chr1	26779995	26783497	-	CDS,downstream
3	LOC_Os02g19140	seven in absentia protein family domain containing protein, expressed	gene	seven in absentia protein family domain containing protein, expressed	chr2	11156869	11161165	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g36780	elongation factor, putative, expressed	gene	elongation factor, putative, expressed	chr3	20401513	20416037	+	CDS
3	LOC_Os12g37160	expressed protein	gene	expressed protein	chr12	22748693	22752214	-	three_prime_UTR
3	LOC_Os10g28510	expressed protein	gene	expressed protein	chr10	14760230	14768117	-	five_prime_UTR
3	LOC_Os04g54840	DNA-directed RNA polymerase subunit, putative, expressed	gene	DNA-directed RNA polymerase subunit, putative, expressed	chr4	32424772	32433840	+	CDS,three_prime_UTR
3	LOC_Os01g24010	pleiotropic drug resistance protein, putative, expressed	gene	pleiotropic drug resistance protein, putative, expressed	chr1	13516492	13527454	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g10850	hhH-GPD superfamily base excision DNA repair protein, putative	gene	hhH-GPD superfamily base excision DNA repair protein, putative	chr12	5848741	5851370	+	CDS
3	LOC_Os01g22090	expressed protein	gene	expressed protein	chr1	12402499	12406977	-	three_prime_UTR
3	LOC_Os06g49810	glycosyl transferase family 8, putative, expressed	gene	glycosyl transferase family 8, putative, expressed	chr6	30135549	30140162	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g13030	OsIAA3 - Auxin-responsive Aux/IAA gene family member, expressed	gene	OsIAA3 - Auxin-responsive Aux/IAA gene family member, expressed	chr1	7248761	7253629	+	CDS,three_prime_UTR
3	LOC_Os01g40570	outer mitochondrial membrane porin, putative, expressed	gene	outer mitochondrial membrane porin, putative, expressed	chr1	22907136	22909643	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g22810	copper/zinc superoxide dismutase, putative, expressed	gene	copper/zinc superoxide dismutase, putative, expressed	chr3	13177888	13183309	+	CDS
3	LOC_Os11g09160	B3 DNA binding domain containing protein, expressed	gene	B3 DNA binding domain containing protein, expressed	chr11	4890449	4897025	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g41400	peptide methionine sulfoxide reductase, putative, expressed	gene	peptide methionine sulfoxide reductase, putative, expressed	chr10	22183248	22185736	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g39650	receptor protein kinase CLAVATA1 precursor, putative, expressed	gene	receptor protein kinase CLAVATA1 precursor, putative, expressed	chr4	23441590	23444842	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g07250	saposin-like type B, region 1 family protein, putative, expressed	gene	saposin-like type B, region 1 family protein, putative, expressed	chr1	3421011	3424559	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g32020	ubiquitin fusion degradation protein, putative, expressed	gene	ubiquitin fusion degradation protein, putative, expressed	chr9	19114579	19117606	-	CDS,promoter,downstream
3	LOC_Os08g45210	Mpv17 / PMP22 family domain containing protein, expressed	gene	Mpv17 / PMP22 family domain containing protein, expressed	chr8	28385439	28388371	+	CDS
3	LOC_Os12g13570	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr12	7609706	7617485	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g48990	phosphatidylinositol transfer, putative, expressed	gene	phosphatidylinositol transfer, putative, expressed	chr2	29944792	29950956	-	CDS
3	LOC_Os08g14050	expressed protein	gene	expressed protein	chr8	8414409	8417569	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os11g48040	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr11	28437935	28441880	+	CDS,downstream
3	LOC_Os03g15560	wibg, putative, expressed	gene	wibg, putative, expressed	chr3	8567383	8571001	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g32750	TATA binding protein-associated factor, putative, expressed	gene	TATA binding protein-associated factor, putative, expressed	chr1	17959819	17967556	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g02130	expressed protein	gene	expressed protein	chr9	798487	805530	+	CDS
3	LOC_Os08g31228	ribosomal protein L27, putative, expressed	gene	ribosomal protein L27, putative, expressed	chr8	19304609	19308797	+	five_prime_UTR,CDS
3	LOC_Os05g48960	splicing factor U2AF, putative, expressed	gene	splicing factor U2AF, putative, expressed	chr5	28017567	28020318	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g03130	ubiquitin-conjugating enzyme, putative, expressed	gene	ubiquitin-conjugating enzyme, putative, expressed	chr3	1317242	1320663	+	CDS,three_prime_UTR
3	LOC_Os03g39830	expressed protein	gene	expressed protein	chr3	22148830	22150119	-	three_prime_UTR,promoter
3	LOC_Os02g26400	nuclease, EndA/NucM family protein, expressed	gene	nuclease, EndA/NucM family protein, expressed	chr2	15496629	15501406	-	CDS
3	LOC_Os02g48790	AML1, putative, expressed	gene	AML1, putative, expressed	chr2	29853368	29861584	+	CDS,three_prime_UTR
3	LOC_Os01g42260	transcriptional corepressor LEUNIG, putative, expressed	gene	transcriptional corepressor LEUNIG, putative, expressed	chr1	23937325	23948851	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g04850	pre-mRNA-processing factor 31, putative, expressed	gene	pre-mRNA-processing factor 31, putative, expressed	chr7	2143151	2150825	+	three_prime_UTR
3	LOC_Os07g48700	expressed protein	gene	expressed protein	chr7	29154989	29161638	-	CDS
3	LOC_Os01g68560	OsMADS98 - MADS-box family gene with M-beta type-box, expressed	gene	OsMADS98 - MADS-box family gene with M-beta type-box, expressed	chr1	39825751	39827689	-	three_prime_UTR,promoter
3	LOC_Os01g68810	expressed protein	gene	expressed protein	chr1	39959242	39974874	-	three_prime_UTR,promoter
3	LOC_Os02g39580	ZOS2-12 - C2H2 zinc finger protein, expressed	gene	ZOS2-12 - C2H2 zinc finger protein, expressed	chr2	23885097	23887066	+	CDS,three_prime_UTR,promoter
3	LOC_Os05g08560	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr5	4669083	4672362	-	CDS
3	LOC_Os07g10600	cycloartenol-C-24-methyltransferase 1, putative, expressed	gene	cycloartenol-C-24-methyltransferase 1, putative, expressed	chr7	5749882	5755708	-	CDS,three_prime_UTR
3	LOC_Os02g05710	expressed protein	gene	expressed protein	chr2	2804120	2807633	-	three_prime_UTR,promoter
3	LOC_Os06g14460	chromosome condensation protein like, putative, expressed	gene	chromosome condensation protein like, putative, expressed	chr6	8126438	8128381	+	CDS,downstream
3	LOC_Os03g42040	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr3	23351406	23358854	-	CDS
3	LOC_Os02g53060	peptidase, T1 family, putative, expressed	gene	peptidase, T1 family, putative, expressed	chr2	32458900	32462724	-	CDS,three_prime_UTR,downstream
3	LOC_Os04g46010	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr4	27071114	27073811	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os08g28190	actin, putative, expressed	gene	actin, putative, expressed	chr8	17201864	17206657	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g54990	TMS membrane protein/tumour differentially expressed protein, putative, expressed	gene	TMS membrane protein/tumour differentially expressed protein, putative, expressed	chr2	33684870	33688279	-	three_prime_UTR,promoter,downstream
3	LOC_Os02g47744	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr2	29184451	29189704	+	five_prime_UTR,CDS
3	LOC_Os01g66560	signal recognition particle 72 kDa protein, putative, expressed	gene	signal recognition particle 72 kDa protein, putative, expressed	chr1	38649475	38653685	+	CDS
3	LOC_Os04g57610	auxin response factor, putative, expressed	gene	auxin response factor, putative, expressed	chr4	34093306	34100763	-	CDS,three_prime_UTR
3	LOC_Os05g46630	expressed protein	gene	expressed protein	chr5	26933090	26936528	-	CDS,five_prime_UTR
3	LOC_Os02g32750	glycosyltransferase, putative, expressed	gene	glycosyltransferase, putative, expressed	chr2	19444491	19447715	-	three_prime_UTR,promoter,downstream
3	LOC_Os11g02620	BTBN21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed	gene	BTBN21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed	chr11	826667	830855	-	CDS
3	LOC_Os05g35060	DUF803 domain containing, putative, expressed	gene	DUF803 domain containing, putative, expressed	chr5	20744498	20748759	-	CDS,three_prime_UTR
3	LOC_Os10g30090	amino acid permease, putative, expressed	gene	amino acid permease, putative, expressed	chr10	15558083	15564670	-	CDS,three_prime_UTR
3	LOC_Os02g57530	ethylene receptor, putative, expressed	gene	ethylene receptor, putative, expressed	chr2	35245524	35250174	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g41010	zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed	gene	zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed	chr6	24490982	24493241	+	three_prime_UTR,downstream
3	LOC_Os05g43950	expressed protein	gene	expressed protein	chr5	25513060	25517181	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g11960	copper/zinc superoxide dismutase, putative, expressed	gene	copper/zinc superoxide dismutase, putative, expressed	chr3	6270895	6274728	-	CDS,three_prime_UTR,downstream
3	LOC_Os09g33470	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr9	19727928	19735060	-	CDS,downstream
3	LOC_Os01g09000	glutaminyl-tRNA synthetase, putative, expressed	gene	glutaminyl-tRNA synthetase, putative, expressed	chr1	4513298	4519613	-	CDS,three_prime_UTR
3	LOC_Os02g10740	calcium-binding mitochondrial carrier CBG00135, putative, expressed	gene	calcium-binding mitochondrial carrier CBG00135, putative, expressed	chr2	5663004	5668429	-	CDS,three_prime_UTR
3	LOC_Os04g34620	expressed protein	gene	expressed protein	chr4	20777669	20780861	-	CDS
3	LOC_Os10g07978	disease resistance protein RPM1, putative, expressed	gene	disease resistance protein RPM1, putative, expressed	chr10	4279053	4282971	+	CDS
3	LOC_Os09g29890	phosphatidylinositol 3- and 4-kinase family protein, putative, expressed	gene	phosphatidylinositol 3- and 4-kinase family protein, putative, expressed	chr9	18173531	18177938	-	CDS
3	LOC_Os09g04890	histone-lysine N-methyltransferase, H3 lysine-4 specific ATX1, putative, expressed	gene	histone-lysine N-methyltransferase, H3 lysine-4 specific ATX1, putative, expressed	chr9	2600650	2614934	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g03950	zinc finger, C3HC4 type family protein, expressed	gene	zinc finger, C3HC4 type family protein, expressed	chr2	1680213	1689438	+	three_prime_UTR
3	LOC_Os03g13240	peptide transporter, putative, expressed	gene	peptide transporter, putative, expressed	chr3	7138070	7142556	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g49610	ribosomal protein L7Ae, putative, expressed	gene	ribosomal protein L7Ae, putative, expressed	chr2	30317371	30319797	-	CDS,three_prime_UTR
3	LOC_Os03g55920	hydrolase, acting on carbon-nitrogen, putative, expressed	gene	hydrolase, acting on carbon-nitrogen, putative, expressed	chr3	31833015	31837368	-	CDS,downstream
3	LOC_Os04g50960	expressed protein	gene	expressed protein	chr4	29982105	29986782	+	CDS
3	LOC_Os06g38320	expressed protein	gene	expressed protein	chr6	22698044	22704081	+	CDS
3	LOC_Os02g38580	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr2	23320467	23326027	+	five_prime_UTR,CDS,promoter
3	LOC_Os02g33490	inorganic H+ pyrophosphatase, putative, expressed	gene	inorganic H+ pyrophosphatase, putative, expressed	chr2	19906424	19915239	-	CDS,three_prime_UTR
3	LOC_Os03g58890	oxidoreductase, putative, expressed	gene	oxidoreductase, putative, expressed	chr3	33515389	33517395	-	three_prime_UTR,promoter,downstream
3	LOC_Os10g39800	conserved hypothetical protein	gene	conserved hypothetical protein	chr10	21230487	21234139	+	CDS
3	LOC_Os03g07350	CSLA4 - cellulose synthase-like family A; mannan synthase, expressed	gene	CSLA4 - cellulose synthase-like family A; mannan synthase, expressed	chr3	3728189	3732480	+	CDS,promoter
3	LOC_Os02g48350	diacylglycerol O-acyltransferase, putative, expressed	gene	diacylglycerol O-acyltransferase, putative, expressed	chr2	29593105	29595977	-	CDS,promoter
3	LOC_Os01g42250	expressed protein	gene	expressed protein	chr1	23933104	23936188	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g35740	subtilisin N-terminal Region family protein, expressed	gene	subtilisin N-terminal Region family protein, expressed	chr5	21152255	21154373	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g39630	CAMK_CAMK_like.49 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.49 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr12	24424607	24428455	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g53270	expressed protein	gene	expressed protein	chr2	32596270	32605203	+	CDS,three_prime_UTR,promoter
3	LOC_Os02g03050	dimethyladenosine transferase, putative, expressed	gene	dimethyladenosine transferase, putative, expressed	chr2	1198096	1202330	-	CDS,three_prime_UTR
3	LOC_Os03g04380	LYR motif containing protein, putative, expressed	gene	LYR motif containing protein, putative, expressed	chr3	2013773	2015853	+	three_prime_UTR
3	LOC_Os02g02990	translation initiation factor eIF3 subunit, putative, expressed	gene	translation initiation factor eIF3 subunit, putative, expressed	chr2	1173896	1177018	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g34610	expressed protein	gene	expressed protein	chr1	19078203	19082440	+	CDS,three_prime_UTR
3	LOC_Os12g34900	expressed protein	gene	expressed protein	chr12	21214115	21216773	+	three_prime_UTR,downstream
3	LOC_Os04g36560	chloride channel protein, putative, expressed	gene	chloride channel protein, putative, expressed	chr4	21886259	21895282	-	CDS
3	LOC_Os01g73790	NAD dependent epimerase/dehydratase family protein, putative, expressed	gene	NAD dependent epimerase/dehydratase family protein, putative, expressed	chr1	42737623	42741130	-	CDS,three_prime_UTR
3	LOC_Os01g41610	mitochondrial ATP synthase g subunit family protein, putative, expressed	gene	mitochondrial ATP synthase g subunit family protein, putative, expressed	chr1	23552639	23556610	-	CDS,three_prime_UTR
3	LOC_Os06g13720	dehydrogenase E1 component domain containing protein, expressed	gene	dehydrogenase E1 component domain containing protein, expressed	chr6	7601365	7604813	+	CDS
3	LOC_Os03g25380	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr3	14511168	14513280	+	three_prime_UTR,downstream
3	LOC_Os01g05470	transcription factor X1, putative, expressed	gene	transcription factor X1, putative, expressed	chr1	2578552	2582575	-	CDS
3	LOC_Os06g05080	cytochrome c oxidase subunit 5B, mitochondrial precursor, putative, expressed	gene	cytochrome c oxidase subunit 5B, mitochondrial precursor, putative, expressed	chr6	2242717	2245729	-	CDS
3	LOC_Os02g20310	hypothetical protein	gene	hypothetical protein	chr2	11965480	11967583	+	CDS,downstream
3	LOC_Os06g02120	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr6	628681	632784	-	three_prime_UTR,downstream
3	LOC_Os09g24650	zinc finger, C3HC4 type, putative, expressed	gene	zinc finger, C3HC4 type, putative, expressed	chr9	14670542	14675772	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g44132	expressed protein	gene	expressed protein	chr2	26692684	26695432	+	CDS,five_prime_UTR
3	LOC_Os02g02850	bifunctional protein folD, putative, expressed	gene	bifunctional protein folD, putative, expressed	chr2	1086158	1089626	-	CDS,three_prime_UTR,downstream
3	LOC_Os02g55200	expressed protein	gene	expressed protein	chr2	33801136	33809546	-	CDS,three_prime_UTR
3	LOC_Os06g32194	unknown	gene	unknown	chr6	18746281	18749276	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g17260	transcription factor, putative, expressed	gene	transcription factor, putative, expressed	chr1	9927842	9934957	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g36810	beta-galactosidase precursor, putative, expressed	gene	beta-galactosidase precursor, putative, expressed	chr9	21229822	21236330	+	CDS
3	LOC_Os02g14520	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr2	7998421	8002013	-	CDS
3	LOC_Os06g02170	DNAJ heat shock N-terminal domain-containing protein, putative, expressed	gene	DNAJ heat shock N-terminal domain-containing protein, putative, expressed	chr6	656278	658074	+	three_prime_UTR,promoter,downstream
3	LOC_Os03g63870	expressed protein	gene	expressed protein	chr3	36075285	36089498	+	CDS,three_prime_UTR
3	LOC_Os02g58590	N-acetylglucosaminyltransferase I, putative, expressed	gene	N-acetylglucosaminyltransferase I, putative, expressed	chr2	35806734	35812310	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g60260	KH domain containing protein, putative, expressed	gene	KH domain containing protein, putative, expressed	chr1	34851265	34854877	+	CDS,three_prime_UTR
3	LOC_Os08g28200	expressed protein	gene	expressed protein	chr8	17209001	17210493	+	three_prime_UTR,downstream
3	LOC_Os06g33810	zinc finger protein, putative, expressed	gene	zinc finger protein, putative, expressed	chr6	19662230	19668716	+	CDS
3	LOC_Os02g16630	tryptophan biosynthesis protein trpCF, putative, expressed	gene	tryptophan biosynthesis protein trpCF, putative, expressed	chr2	9502440	9505460	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g51754	alpha-amylase precursor, putative, expressed	gene	alpha-amylase precursor, putative, expressed	chr1	29759674	29768992	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g58610	phosphoglycerate kinase protein, putative, expressed	gene	phosphoglycerate kinase protein, putative, expressed	chr1	33883876	33886369	+	CDS,downstream
3	LOC_Os08g24946	EDM2, putative, expressed	gene	EDM2, putative, expressed	chr8	15112706	15127537	+	CDS
3	LOC_Os07g48840	Ser/Thr protein phosphatase family protein, putative, expressed	gene	Ser/Thr protein phosphatase family protein, putative, expressed	chr7	29224284	29227512	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g33480	DAG protein, chloroplast precursor, putative, expressed	gene	DAG protein, chloroplast precursor, putative, expressed	chr9	19736638	19739784	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g50530	expressed protein	gene	expressed protein	chr3	28845156	28847652	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os10g28640	RIO1 family protein, expressed	gene	RIO1 family protein, expressed	chr10	14854501	14858544	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g65320	expressed protein	gene	expressed protein	chr1	37889587	37896404	-	CDS,promoter,downstream
3	LOC_Os02g19210	WD repeat-containing protein, putative, expressed	gene	WD repeat-containing protein, putative, expressed	chr2	11199422	11205878	+	CDS,three_prime_UTR
3	LOC_Os07g23110	poly synthetase 1, putative, expressed	gene	poly synthetase 1, putative, expressed	chr7	13025447	13036168	+	CDS
3	LOC_Os08g10608	ribosomal protein S17, putative, expressed	gene	ribosomal protein S17, putative, expressed	chr8	6242952	6246152	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g34100	metallo-beta-lactamase family protein, putative, expressed	gene	metallo-beta-lactamase family protein, putative, expressed	chr9	20121858	20126936	-	CDS
3	LOC_Os04g41260	amine oxidase, flavin-containing, domain containing protein, expressed	gene	amine oxidase, flavin-containing, domain containing protein, expressed	chr4	24295618	24303724	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g11180	OsPOP12 - Putative Prolyl Oligopeptidase homologue, expressed	gene	OsPOP12 - Putative Prolyl Oligopeptidase homologue, expressed	chr6	5861164	5868597	-	CDS,three_prime_UTR,downstream
3	LOC_Os02g50790	nuclear-pore anchor, putative, expressed	gene	nuclear-pore anchor, putative, expressed	chr2	31003292	31017324	-	CDS,promoter
3	LOC_Os05g36110	protein of unknown function DUF502 domain containing protein, expressed	gene	protein of unknown function DUF502 domain containing protein, expressed	chr5	21347444	21351792	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g56320	AAA-type ATPase family protein, putative, expressed	gene	AAA-type ATPase family protein, putative, expressed	chr4	33390036	33394539	-	CDS
3	LOC_Os08g09350	gar2, putative, expressed	gene	gar2, putative, expressed	chr8	5421261	5425677	-	CDS,promoter
3	LOC_Os03g01910	transcription factor BTF3, putative, expressed	gene	transcription factor BTF3, putative, expressed	chr3	559208	561683	-	three_prime_UTR,promoter
3	LOC_Os06g49510	zinc knuckle family protein, putative, expressed	gene	zinc knuckle family protein, putative, expressed	chr6	29988932	29993453	-	CDS,five_prime_UTR
3	LOC_Os03g10780	flap endonuclease, putative, expressed	gene	flap endonuclease, putative, expressed	chr3	5507792	5515943	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g03100	protein binding protein, putative, expressed	gene	protein binding protein, putative, expressed	chr1	1185260	1190013	-	three_prime_UTR,promoter
3	LOC_Os03g60600	zinc knuckle domain containing protein, expressed	gene	zinc knuckle domain containing protein, expressed	chr3	34427867	34431322	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os12g02630	cytochrome P450 72A1, putative, expressed	gene	cytochrome P450 72A1, putative, expressed	chr12	909825	911396	+	five_prime_UTR,promoter
3	LOC_Os04g49410	expansin precursor, putative, expressed	gene	expansin precursor, putative, expressed	chr4	29300009	29304425	+	CDS,three_prime_UTR
3	LOC_Os03g44210	expressed protein	gene	expressed protein	chr3	24840122	24843738	-	three_prime_UTR,promoter
3	LOC_Os09g36090	plus-3 domain containing protein, expressed	gene	plus-3 domain containing protein, expressed	chr9	20777988	20786462	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g03430	ATSIZ1/SIZ1, putative, expressed	gene	ATSIZ1/SIZ1, putative, expressed	chr5	1426913	1438451	+	three_prime_UTR,downstream
3	LOC_Os05g23340	expressed protein	gene	expressed protein	chr5	13263366	13266364	-	CDS
3	LOC_Os07g38100	HVA22, putative, expressed	gene	HVA22, putative, expressed	chr7	22844052	22848803	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os10g33910	mitochondrial import inner membrane translocase subunit Tim16, putative, expressed	gene	mitochondrial import inner membrane translocase subunit Tim16, putative, expressed	chr10	17935715	17938518	+	CDS
3	LOC_Os03g03570	leucine-rich repeat transmembrane protein kinase, putative, expressed	gene	leucine-rich repeat transmembrane protein kinase, putative, expressed	chr3	1561040	1565902	+	three_prime_UTR,downstream
3	LOC_Os02g19220	expressed protein	gene	expressed protein	chr2	11209033	11217765	-	CDS,three_prime_UTR
3	LOC_Os03g58250	bZIP transcription factor domain containing protein, expressed	gene	bZIP transcription factor domain containing protein, expressed	chr3	33180183	33184675	-	CDS,promoter
3	LOC_Os03g10850	FAD-linked sulfhydryl oxidase ALR, putative, expressed	gene	FAD-linked sulfhydryl oxidase ALR, putative, expressed	chr3	5572283	5575434	-	three_prime_UTR,CDS,promoter
3	LOC_Os04g42580	carboxyvinyl-carboxyphosphonate phosphorylmutase, putative, expressed	gene	carboxyvinyl-carboxyphosphonate phosphorylmutase, putative, expressed	chr4	25002712	25007606	+	CDS,three_prime_UTR
3	LOC_Os06g15779	aluminum-activated malate transporter, putative, expressed	gene	aluminum-activated malate transporter, putative, expressed	chr6	8959002	8963690	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g13700	DNA-binding protein-related, putative, expressed	gene	DNA-binding protein-related, putative, expressed	chr1	7669066	7671762	+	CDS,three_prime_UTR
3	LOC_Os08g20500	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr8	12308600	12313805	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g32800	autophagy-related protein, putative, expressed	gene	autophagy-related protein, putative, expressed	chr7	19624532	19627300	-	CDS,three_prime_UTR
3	LOC_Os02g03860	mitochondrial ATP synthase precursor, putative, expressed	gene	mitochondrial ATP synthase precursor, putative, expressed	chr2	1637578	1641859	+	CDS,three_prime_UTR
3	LOC_Os11g04570	GRAS family transcription factor containing protein, expressed	gene	GRAS family transcription factor containing protein, expressed	chr11	1932914	1938818	-	CDS
3	LOC_Os01g52170	expressed protein	gene	expressed protein	chr1	30007236	30011049	+	CDS
3	LOC_Os01g61560	phosphatidate cytidylyltransferase, putative, expressed	gene	phosphatidate cytidylyltransferase, putative, expressed	chr1	35599988	35602986	-	CDS,three_prime_UTR
3	LOC_Os01g42710	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr1	24291493	24298653	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g03540	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr11	1363211	1368690	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g09100	calmodulin-binding transcription activator, putative, expressed	gene	calmodulin-binding transcription activator, putative, expressed	chr3	4725141	4733013	-	CDS
3	LOC_Os09g32330	expressed protein	gene	expressed protein	chr9	19302482	19304610	-	three_prime_UTR,promoter
3	LOC_Os01g49000	katanin p60 ATPase-containing subunit, putative, expressed	gene	katanin p60 ATPase-containing subunit, putative, expressed	chr1	28135323	28142316	+	CDS,three_prime_UTR
3	LOC_Os08g19470	hypothetical protein	gene	hypothetical protein	chr8	11629395	11630405	+	CDS,downstream
3	LOC_Os03g19410	OsPOP7 - Putative Prolyl Oligopeptidase homologue, expressed	gene	OsPOP7 - Putative Prolyl Oligopeptidase homologue, expressed	chr3	10917037	10924706	+	CDS,promoter
3	LOC_Os12g37380	RNA pseudouridine synthase, putative, expressed	gene	RNA pseudouridine synthase, putative, expressed	chr12	22914824	22917555	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g07739	expressed protein	gene	expressed protein	chr3	3928681	3934723	-	three_prime_UTR,downstream
3	LOC_Os04g31390	vacuolar protein sorting-associated protein 11, putative, expressed	gene	vacuolar protein sorting-associated protein 11, putative, expressed	chr4	18598758	18604205	+	CDS,three_prime_UTR
3	LOC_Os05g50280	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr5	28756797	28761720	-	CDS
3	LOC_Os11g25130	expressed protein	gene	expressed protein	chr11	13848521	13850962	-	CDS,three_prime_UTR
3	LOC_Os11g31640	serine palmitoyltransferase 2, putative, expressed	gene	serine palmitoyltransferase 2, putative, expressed	chr11	18037377	18041613	+	CDS,three_prime_UTR
3	LOC_Os02g35830	extracellular ligand-gated ion channel, putative, expressed	gene	extracellular ligand-gated ion channel, putative, expressed	chr2	21520020	21523108	+	three_prime_UTR,downstream
3	LOC_Os04g22870	rpp14 family protein, expressed	gene	rpp14 family protein, expressed	chr4	12946476	12950628	-	CDS,promoter
3	LOC_Os06g47000	external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor, putative, expressed	gene	external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor, putative, expressed	chr6	28503140	28507824	-	CDS
3	LOC_Os02g03740	pyridoxal biosynthesis protein PDX2, putative, expressed	gene	pyridoxal biosynthesis protein PDX2, putative, expressed	chr2	1566087	1569573	-	CDS
3	LOC_Os11g43820	myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed	gene	myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed	chr11	25996832	26001671	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g09030	2-aminoethanethiol dioxygenase, putative, expressed	gene	2-aminoethanethiol dioxygenase, putative, expressed	chr1	4541296	4545560	+	CDS,three_prime_UTR
3	LOC_Os07g41180	RNA-binding protein-like, putative, expressed	gene	RNA-binding protein-like, putative, expressed	chr7	24653819	24658854	-	CDS,downstream
3	LOC_Os12g07720	RFC4 - Putative clamp loader of PCNA, replication factor C subunit 4, expressed	gene	RFC4 - Putative clamp loader of PCNA, replication factor C subunit 4, expressed	chr12	3872349	3876348	+	CDS
3	LOC_Os04g35900	translocon Tic40, putative, expressed	gene	translocon Tic40, putative, expressed	chr4	21715049	21721038	-	CDS,downstream
3	LOC_Os12g05420	calmodulin-binding protein, putative, expressed	gene	calmodulin-binding protein, putative, expressed	chr12	2450777	2454624	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g38959	40S ribosomal protein S9-2, putative, expressed	gene	40S ribosomal protein S9-2, putative, expressed	chr11	22718318	22721505	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os08g36330	POLE2B - Putative DNA polymerase epsilon complex subunit, expressed	gene	POLE2B - Putative DNA polymerase epsilon complex subunit, expressed	chr8	22885934	22890337	+	CDS,three_prime_UTR
3	LOC_Os03g14000	acyl CoA binding protein, putative, expressed	gene	acyl CoA binding protein, putative, expressed	chr3	7590806	7596385	+	CDS
3	LOC_Os11g04880	ubiquitin-like protein 5, putative, expressed	gene	ubiquitin-like protein 5, putative, expressed	chr11	2070410	2073046	+	three_prime_UTR,downstream
3	LOC_Os12g35290	conserved oligomeric Golgi complex component 8, putative, expressed	gene	conserved oligomeric Golgi complex component 8, putative, expressed	chr12	21407812	21414263	+	CDS
3	LOC_Os07g28460	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr7	16649384	16656253	+	three_prime_UTR,CDS
3	LOC_Os06g39690	SOUL heme-binding protein, putative, expressed	gene	SOUL heme-binding protein, putative, expressed	chr6	23558645	23562077	+	CDS,promoter
3	LOC_Os06g40950	DNA-directed RNA polymerase I subunit RPA1, putative, expressed	gene	DNA-directed RNA polymerase I subunit RPA1, putative, expressed	chr6	24424495	24426135	+	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os02g01450	expressed protein	gene	expressed protein	chr2	265783	268915	+	CDS,promoter
3	LOC_Os06g23274	zinc finger, C3HC4 type, domain containing protein, expressed	gene	zinc finger, C3HC4 type, domain containing protein, expressed	chr6	13583734	13590993	-	CDS,three_prime_UTR
3	LOC_Os02g45690	uncharacterized mscS family protein, putative, expressed	gene	uncharacterized mscS family protein, putative, expressed	chr2	27792179	27798074	+	CDS,three_prime_UTR
3	LOC_Os10g27274	expressed protein	gene	expressed protein	chr10	14323739	14327284	+	CDS,three_prime_UTR
3	LOC_Os02g51490	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr2	31526241	31529049	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os11g34460	OsFBO10 - F-box and other domain containing protein, expressed	gene	OsFBO10 - F-box and other domain containing protein, expressed	chr11	19716399	19721249	-	five_prime_UTR,three_prime_UTR,promoter
3	LOC_Os01g24020	expressed protein	gene	expressed protein	chr1	13522446	13530751	-	three_prime_UTR,promoter
3	LOC_Os02g10900	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr2	5785295	5788769	-	CDS
3	LOC_Os08g41480	SAM domain containing protein, putative, expressed	gene	SAM domain containing protein, putative, expressed	chr8	26195467	26198859	+	three_prime_UTR
3	LOC_Os04g39190	cell division protease ftsH homolog 4, putative, expressed	gene	cell division protease ftsH homolog 4, putative, expressed	chr4	23120546	23126202	-	three_prime_UTR
3	LOC_Os12g39970	expressed protein	gene	expressed protein	chr12	24664170	24667260	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g17500	expressed protein	gene	expressed protein	chr6	10148827	10151293	-	three_prime_UTR,promoter
3	LOC_Os09g34960	hydroxymethylglutaryl-CoA synthase, putative, expressed	gene	hydroxymethylglutaryl-CoA synthase, putative, expressed	chr9	20366837	20370878	+	CDS,downstream
3	LOC_Os02g57590	rRNA 2-O-methyltransferase fibrillarin 2, putative, expressed	gene	rRNA 2-O-methyltransferase fibrillarin 2, putative, expressed	chr2	35265718	35268913	+	CDS,three_prime_UTR
3	LOC_Os05g30800	26S proteasome non-ATPase regulatory subunit 14, putative, expressed	gene	26S proteasome non-ATPase regulatory subunit 14, putative, expressed	chr5	17809534	17813167	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g03230	eukaryotic translation initiation factor 3 subunit C, putative, expressed	gene	eukaryotic translation initiation factor 3 subunit C, putative, expressed	chr7	1273555	1277738	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g23190	receptor-like protein kinase 5 precursor, putative, expressed	gene	receptor-like protein kinase 5 precursor, putative, expressed	chr6	13540655	13543835	+	CDS,promoter
3	LOC_Os09g32250	DNA repair ATPase-related, putative, expressed	gene	DNA repair ATPase-related, putative, expressed	chr9	19244505	19249914	+	CDS,three_prime_UTR
3	LOC_Os06g43640	Ser/Thr protein phosphatase family protein, putative, expressed	gene	Ser/Thr protein phosphatase family protein, putative, expressed	chr6	26253122	26258284	-	CDS
3	LOC_Os03g21630	PRC-barrel domain protein, putative, expressed	gene	PRC-barrel domain protein, putative, expressed	chr3	12346277	12351803	+	CDS,three_prime_UTR
3	LOC_Os02g55520	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr2	33984751	33990985	-	CDS
3	LOC_Os04g18010	cleavage and polyadenylation specificity factor subunit 1, putative, expressed	gene	cleavage and polyadenylation specificity factor subunit 1, putative, expressed	chr4	9879475	9906954	-	three_prime_UTR
3	LOC_Os01g12400	S-locus lectin protein kinase family protein, putative, expressed	gene	S-locus lectin protein kinase family protein, putative, expressed	chr1	6773200	6776805	-	five_prime_UTR,CDS
3	LOC_Os08g01610	DUF250 domain containing protein, putative, expressed	gene	DUF250 domain containing protein, putative, expressed	chr8	360152	365564	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g07910	fiber protein Fb15, putative, expressed	gene	fiber protein Fb15, putative, expressed	chr2	4141488	4143678	+	three_prime_UTR,downstream
3	LOC_Os07g36590	serine/threonine-protein kinase receptor precursor, putative, expressed	gene	serine/threonine-protein kinase receptor precursor, putative, expressed	chr7	21875897	21882379	-	CDS
3	LOC_Os12g02640	cytochrome P450 72A1, putative, expressed	gene	cytochrome P450 72A1, putative, expressed	chr12	911504	915531	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g07730	phosphate/phosphoenolpyruvate translocator-related protein, putative, expressed	gene	phosphate/phosphoenolpyruvate translocator-related protein, putative, expressed	chr1	3710212	3712653	+	CDS,downstream
3	LOC_Os01g56969	homeobox-leucine zipper protein ATHB-54, putative, expressed	gene	homeobox-leucine zipper protein ATHB-54, putative, expressed	chr1	32906199	32907936	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g49700	SNARE associated Golgi protein, putative, expressed	gene	SNARE associated Golgi protein, putative, expressed	chr3	28290196	28293344	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g08160	hypothetical protein	gene	hypothetical protein	chr3	4160554	4164012	+	CDS
3	LOC_Os04g39840	Os4bglu10 - beta-glucosidase homologue, similar to Os4Bglu12 exoglucanase/beta-glucosidase, expressed	gene	Os4bglu10 - beta-glucosidase homologue, similar to Os4Bglu12 exoglucanase/beta-glucosidase, expressed	chr4	23542777	23548804	-	CDS
3	LOC_Os04g39160	RNA-dependent RNA polymerase, putative, expressed	gene	RNA-dependent RNA polymerase, putative, expressed	chr4	23099662	23105392	+	CDS
3	LOC_Os02g53110	expressed protein	gene	expressed protein	chr2	32489362	32493246	+	CDS,three_prime_UTR,five_prime_UTR,downstream
3	LOC_Os05g02410	expressed protein	gene	expressed protein	chr5	791873	794655	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g64400	oxidoreductase/ transition metal ion binding protein, putative, expressed	gene	oxidoreductase/ transition metal ion binding protein, putative, expressed	chr3	36387643	36394575	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g48626	expressed protein	gene	expressed protein	chr3	27716807	27722107	-	CDS,three_prime_UTR
3	LOC_Os11g48020	fatty acid hydroxylase, putative, expressed	gene	fatty acid hydroxylase, putative, expressed	chr11	28430686	28433978	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g17190	OsCam3 - Calmodulin, expressed	gene	OsCam3 - Calmodulin, expressed	chr1	9886602	9888304	+	three_prime_UTR,downstream
3	LOC_Os04g20210	expressed protein	gene	expressed protein	chr4	11254598	11262273	-	three_prime_UTR
3	LOC_Os11g10060	transcriptional corepressor SEUSS, putative	gene	transcriptional corepressor SEUSS, putative	chr11	5395866	5403248	+	CDS,downstream
3	LOC_Os08g25050	PIF-like orf1, putative, expressed	gene	PIF-like orf1, putative, expressed	chr8	15197015	15199104	-	three_prime_UTR,downstream
3	LOC_Os10g41710	chaperonin, putative, expressed	gene	chaperonin, putative, expressed	chr10	22381537	22385110	+	CDS,three_prime_UTR
3	LOC_Os11g29920	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr11	16919155	16927553	-	CDS,promoter
3	LOC_Os07g34510	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr7	20680161	20689974	+	CDS
3	LOC_Os05g31040	cytokinin dehydrogenase precursor, putative, expressed	gene	cytokinin dehydrogenase precursor, putative, expressed	chr5	17972737	17974885	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g54910	atATG18b, putative, expressed	gene	atATG18b, putative, expressed	chr2	33623458	33627745	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g35000	G-patch domain containing protein, expressed	gene	G-patch domain containing protein, expressed	chr10	18595733	18597890	+	CDS,downstream
3	LOC_Os01g31870	natural resistance-associated macrophage protein, putative, expressed	gene	natural resistance-associated macrophage protein, putative, expressed	chr1	17452977	17464003	-	CDS,three_prime_UTR
3	LOC_Os05g33570	pyruvate, phosphate dikinase, chloroplast precursor, putative, expressed	gene	pyruvate, phosphate dikinase, chloroplast precursor, putative, expressed	chr5	19655990	19675341	-	CDS
3	LOC_Os03g07226	thioredoxin, putative, expressed	gene	thioredoxin, putative, expressed	chr3	3693437	3697196	-	CDS,five_prime_UTR,downstream
3	LOC_Os03g50090	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr3	28560049	28564373	-	three_prime_UTR
3	LOC_Os02g07680	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr2	3995977	4006895	+	CDS,promoter
3	LOC_Os02g33830	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	20163722	20166287	-	CDS
3	LOC_Os11g35220	OsWAK117 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed	gene	OsWAK117 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed	chr11	20184951	20188025	-	CDS,three_prime_UTR
3	LOC_Os12g20324	cyclin-A1, putative, expressed	gene	cyclin-A1, putative, expressed	chr12	11864235	11868970	-	three_prime_UTR,promoter
3	LOC_Os01g54900	lipid-A-disaccharide synthase family protein, expressed	gene	lipid-A-disaccharide synthase family protein, expressed	chr1	31567864	31574567	-	CDS
3	LOC_Os03g15010	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr3	8190832	8194118	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g55320	two-component response regulator, putative, expressed	gene	two-component response regulator, putative, expressed	chr2	33853956	33858973	-	CDS,promoter
3	LOC_Os01g60040	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr1	34704427	34721518	-	CDS,three_prime_UTR
3	LOC_Os05g14930	conserved hypothetical protein	gene	conserved hypothetical protein	chr5	8475331	8478030	+	CDS,downstream
3	LOC_Os01g06450	glycosyltransferase family 43 protein, putative, expressed	gene	glycosyltransferase family 43 protein, putative, expressed	chr1	3038298	3040232	+	CDS,downstream
3	LOC_Os02g27740	expressed protein	gene	expressed protein	chr2	16420239	16424704	+	CDS
3	LOC_Os06g42730	OsPOP14 - Putative Prolyl Oligopeptidase homologue, expressed	gene	OsPOP14 - Putative Prolyl Oligopeptidase homologue, expressed	chr6	25697744	25701804	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g57040	dehydrogenase, putative, expressed	gene	dehydrogenase, putative, expressed	chr2	34924401	34928315	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os09g10960	SWP, putative, expressed	gene	SWP, putative, expressed	chr9	6036880	6048276	-	CDS,three_prime_UTR
3	LOC_Os07g43470	GTP-binding protein, putative, expressed	gene	GTP-binding protein, putative, expressed	chr7	26018545	26023762	-	CDS,three_prime_UTR
3	LOC_Os07g38940	ubiquitin-conjugating enzyme, putative, expressed	gene	ubiquitin-conjugating enzyme, putative, expressed	chr7	23348429	23351495	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os10g33290	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr10	17413156	17419578	-	CDS,three_prime_UTR
3	LOC_Os07g45350	zinc finger, RING-type, putative, expressed	gene	zinc finger, RING-type, putative, expressed	chr7	27049725	27053794	-	CDS,three_prime_UTR
3	LOC_Os06g08770	ruvB-like 2, putative, expressed	gene	ruvB-like 2, putative, expressed	chr6	4387210	4390754	-	CDS,three_prime_UTR
3	LOC_Os01g16900	dehydrogenase, putative, expressed	gene	dehydrogenase, putative, expressed	chr1	9664385	9669213	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g43519	expressed protein	gene	expressed protein	chr2	26256778	26259955	+	three_prime_UTR,downstream
3	LOC_Os10g39540	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr10	21054681	21058573	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os04g59320	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr4	35085833	35091686	+	CDS
3	LOC_Os03g01016	expressed protein	gene	expressed protein	chr3	18876	22618	-	CDS,three_prime_UTR
3	LOC_Os04g44770	expressed protein	gene	expressed protein	chr4	26326223	26330281	-	CDS
3	LOC_Os05g41150	expressed protein	gene	expressed protein	chr5	24041065	24043972	-	CDS,three_prime_UTR
3	LOC_Os04g55090	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr4	32573743	32577339	+	three_prime_UTR,promoter,downstream
3	LOC_Os08g06520	expressed protein	gene	expressed protein	chr8	3689679	3692370	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g10070	transcription initiation factor IIB, putative, expressed	gene	transcription initiation factor IIB, putative, expressed	chr3	5081308	5084041	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os08g39160	formyl transferase, putative, expressed	gene	formyl transferase, putative, expressed	chr8	24728878	24731389	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g55900	holliday junction resolvase, putative, expressed	gene	holliday junction resolvase, putative, expressed	chr1	32188887	32192418	+	CDS,three_prime_UTR
3	LOC_Os03g04990	expressed protein	gene	expressed protein	chr3	2414602	2418804	+	CDS
3	LOC_Os09g03600	immunoglobulin/major histocompatibility complex, putative, expressed	gene	immunoglobulin/major histocompatibility complex, putative, expressed	chr9	1779097	1785142	+	CDS,three_prime_UTR
3	LOC_Os01g44230	transcription factor X1, putative, expressed	gene	transcription factor X1, putative, expressed	chr1	25361992	25366117	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g49610	Os3bglu8 - beta-glucosidase, exo-beta-glucansase, high similarity to Os3bglu7, expressed	gene	Os3bglu8 - beta-glucosidase, exo-beta-glucansase, high similarity to Os3bglu7, expressed	chr3	28241785	28247101	-	CDS,downstream
3	LOC_Os04g59580	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr4	35245220	35247716	-	CDS,promoter
3	LOC_Os10g25200	expressed protein	gene	expressed protein	chr10	12934964	12942941	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g55590	AMP-binding enzyme, putative, expressed	gene	AMP-binding enzyme, putative, expressed	chr1	32025261	32031643	+	CDS
3	LOC_Os01g03070	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr1	1170809	1178372	-	CDS,three_prime_UTR
3	LOC_Os07g03849	expressed protein	gene	expressed protein	chr7	1605096	1607996	+	CDS,three_prime_UTR
3	LOC_Os08g05350	expressed protein	gene	expressed protein	chr8	2815400	2817081	-	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os04g21830	hypothetical protein	gene	hypothetical protein	chr4	12366414	12368102	-	CDS,promoter
3	LOC_Os01g42880	transferase family protein, putative, expressed	gene	transferase family protein, putative, expressed	chr1	24396464	24399661	-	CDS,three_prime_UTR
3	LOC_Os05g33850	UBA/TS-N domain containing protein, expressed	gene	UBA/TS-N domain containing protein, expressed	chr5	19906349	19911025	-	CDS,three_prime_UTR
3	LOC_Os04g44830	thioredoxin, putative, expressed	gene	thioredoxin, putative, expressed	chr4	26355331	26357839	-	CDS,downstream
3	LOC_Os12g28100	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr12	16586355	16593295	-	CDS
3	LOC_Os07g06660	glyoxalase family protein, putative, expressed	gene	glyoxalase family protein, putative, expressed	chr7	3243730	3246324	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g04590	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr12	1937981	1940120	-	three_prime_UTR,downstream
3	LOC_Os01g16190	26S proteasome non-ATPase regulatory subunit 14, putative, expressed	gene	26S proteasome non-ATPase regulatory subunit 14, putative, expressed	chr1	9165353	9168971	+	CDS,promoter
3	LOC_Os05g13390	expressed protein	gene	expressed protein	chr5	7432266	7438245	+	CDS
3	LOC_Os01g05060	mitochondrial glycoprotein, putative, expressed	gene	mitochondrial glycoprotein, putative, expressed	chr1	2373472	2375768	-	CDS,three_prime_UTR
3	LOC_Os04g35620	conserved hypothetical protein	gene	conserved hypothetical protein	chr4	21534510	21539011	-	CDS
3	LOC_Os10g30870	expressed protein	gene	expressed protein	chr10	16025088	16027322	-	three_prime_UTR,promoter
3	LOC_Os02g45250	homeobox and START domains containing protein, putative, expressed	gene	homeobox and START domains containing protein, putative, expressed	chr2	27481996	27489045	-	CDS
3	LOC_Os09g32810	ribulose-phosphate 3-epimerase, putative, expressed	gene	ribulose-phosphate 3-epimerase, putative, expressed	chr9	19565734	19568514	+	CDS,three_prime_UTR,promoter
3	LOC_Os04g53410	MBTB7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed	gene	MBTB7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed	chr4	31626911	31628011	+	CDS,downstream
3	LOC_Os08g10649	GTPase of unknown function domain containing protein, putative, expressed	gene	GTPase of unknown function domain containing protein, putative, expressed	chr8	6271219	6279927	+	CDS,three_prime_UTR
3	LOC_Os01g72480	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr1	42024629	42026943	+	CDS,three_prime_UTR
3	LOC_Os01g56730	expressed protein	gene	expressed protein	chr1	32734312	32738789	+	CDS
3	LOC_Os01g48380	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr1	27724280	27731437	+	CDS
3	LOC_Os04g54002	serine/threonine-protein kinase receptor precursor, putative, expressed	gene	serine/threonine-protein kinase receptor precursor, putative, expressed	chr4	32004297	32008081	-	CDS
3	LOC_Os03g33012	WRKY DNA-binding domain containing protein, expressed	gene	WRKY DNA-binding domain containing protein, expressed	chr3	18881133	18892135	+	CDS
3	LOC_Os07g18720	tetratricopeptide repeat containing protein, putative, expressed	gene	tetratricopeptide repeat containing protein, putative, expressed	chr7	11063796	11075999	+	CDS,promoter
3	LOC_Os05g50560	CGMC_MAPKCMGC_2.9 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	gene	CGMC_MAPKCMGC_2.9 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	chr5	28927141	28933027	+	CDS,three_prime_UTR,promoter
3	LOC_Os02g36390	nucleotide-sugar transporter family protein, putative, expressed	gene	nucleotide-sugar transporter family protein, putative, expressed	chr2	21975112	21980700	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os11g38920	HVA22, putative, expressed	gene	HVA22, putative, expressed	chr11	22705768	22710219	+	CDS,three_prime_UTR,five_prime_UTR
3	LOC_Os09g39980	ubiquitin family protein, putative, expressed	gene	ubiquitin family protein, putative, expressed	chr9	22924984	22928257	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g51630	XIE, putative, expressed	gene	XIE, putative, expressed	chr1	29651535	29654580	-	five_prime_UTR,CDS
3	LOC_Os11g01154	dehydrogenase, putative, expressed	gene	dehydrogenase, putative, expressed	chr11	93456	98908	+	CDS,three_prime_UTR,promoter
3	LOC_Os04g02050	bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase, putative, expressed	gene	bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase, putative, expressed	chr4	645156	649133	-	CDS
3	LOC_Os03g58800	ATPase, putative, expressed	gene	ATPase, putative, expressed	chr3	33480523	33482811	+	three_prime_UTR,downstream
3	LOC_Os02g31150	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr2	18643428	18649402	-	CDS
3	LOC_Os09g40000	AGAP005770-PA, putative, expressed	gene	AGAP005770-PA, putative, expressed	chr9	22933500	22938707	+	three_prime_UTR,CDS
3	LOC_Os02g51780	ribonuclease protein, putative, expressed	gene	ribonuclease protein, putative, expressed	chr2	31705483	31710525	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g17020	glycosyl hydrolases family 17 protein, putative, expressed	gene	glycosyl hydrolases family 17 protein, putative, expressed	chr1	9749056	9752746	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g08690	holocarboxylase synthetase, putative, expressed	gene	holocarboxylase synthetase, putative, expressed	chr1	4325578	4327863	+	three_prime_UTR,downstream
3	LOC_Os08g44930	SNARE domain containing protein, putative, expressed	gene	SNARE domain containing protein, putative, expressed	chr8	28206036	28208962	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os09g33790	snRK1-interacting protein 1, putative, expressed	gene	snRK1-interacting protein 1, putative, expressed	chr9	19950223	19953474	+	CDS,three_prime_UTR
3	LOC_Os10g06130	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr10	3112799	3117851	-	three_prime_UTR,CDS
3	LOC_Os06g04450	Sec1 family transport protein, putative, expressed	gene	Sec1 family transport protein, putative, expressed	chr6	1899863	1908009	-	CDS,downstream
3	LOC_Os12g07670	transmembrane 9 superfamily member, putative, expressed	gene	transmembrane 9 superfamily member, putative, expressed	chr12	3854769	3860044	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g46555	F-box domain containing protein	gene	F-box domain containing protein	chr7	27802485	27804663	+	CDS,downstream
3	LOC_Os01g69110	expressed protein	gene	expressed protein	chr1	40169828	40172247	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g37130	FUR1, putative, expressed	gene	FUR1, putative, expressed	chr7	22242932	22245497	-	CDS,three_prime_UTR
3	LOC_Os09g26999	keratin-associated protein 5-4, putative, expressed	gene	keratin-associated protein 5-4, putative, expressed	chr9	16410150	16414861	+	CDS,three_prime_UTR
3	LOC_Os08g40440	dihydroflavonol-4-reductase, putative, expressed	gene	dihydroflavonol-4-reductase, putative, expressed	chr8	25588370	25590329	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g70580	thiamin pyrophosphokinase 1, putative, expressed	gene	thiamin pyrophosphokinase 1, putative, expressed	chr1	40867665	40870841	-	CDS
3	LOC_Os06g40940	glycine dehydrogenase, putative, expressed	gene	glycine dehydrogenase, putative, expressed	chr6	24398541	24405053	-	CDS
3	LOC_Os03g38970	metal ion binding protein, putative, expressed	gene	metal ion binding protein, putative, expressed	chr3	21645910	21658739	-	CDS
3	LOC_Os09g25950	regulator protein, putative, expressed	gene	regulator protein, putative, expressed	chr9	15582139	15585501	+	CDS
3	LOC_Os01g45530	single-stranded DNA-binding protein, putative, expressed	gene	single-stranded DNA-binding protein, putative, expressed	chr1	25840482	25842473	-	three_prime_UTR,promoter
3	LOC_Os02g58250	expressed protein	gene	expressed protein	chr2	35650923	35654667	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g38572	EMB2423, putative, expressed	gene	EMB2423, putative, expressed	chr2	23316906	23318250	+	three_prime_UTR,downstream
3	LOC_Os02g33230	nucleoside-diphosphate-sugar epimerase, putative, expressed	gene	nucleoside-diphosphate-sugar epimerase, putative, expressed	chr2	19744245	19749295	+	CDS,three_prime_UTR
3	LOC_Os03g63150	powdery mildew resistance protein PM3b, putative, expressed	gene	powdery mildew resistance protein PM3b, putative, expressed	chr3	35686155	35691879	-	CDS,promoter
3	LOC_Os07g37180	ABC1 family domain containing protein, putative, expressed	gene	ABC1 family domain containing protein, putative, expressed	chr7	22266756	22272623	-	CDS,three_prime_UTR
3	LOC_Os05g04220	nitrogen regulatory protein P-II, putative, expressed	gene	nitrogen regulatory protein P-II, putative, expressed	chr5	1924048	1927224	-	CDS,three_prime_UTR
3	LOC_Os04g46310	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr4	27259326	27274951	+	CDS,downstream
3	LOC_Os10g17454	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr10	8715810	8725381	-	CDS,three_prime_UTR
3	LOC_Os05g49640	expressed protein	gene	expressed protein	chr5	28415652	28417742	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g56280	lactate/malate dehydrogenase, putative, expressed	gene	lactate/malate dehydrogenase, putative, expressed	chr3	32078878	32082562	-	CDS
3	LOC_Os03g18680	membrane associated DUF588 domain containing protein, putative, expressed	gene	membrane associated DUF588 domain containing protein, putative, expressed	chr3	10455900	10458586	+	three_prime_UTR,downstream
3	LOC_Os06g05250	GTP-binding protein GUF1, putative, expressed	gene	GTP-binding protein GUF1, putative, expressed	chr6	2365603	2371122	-	CDS,three_prime_UTR
3	LOC_Os11g35320	BSD domain-containing protein, putative, expressed	gene	BSD domain-containing protein, putative, expressed	chr11	20243441	20248107	-	CDS,three_prime_UTR
3	LOC_Os10g39120	ubiquitin-conjugating enzyme, putative, expressed	gene	ubiquitin-conjugating enzyme, putative, expressed	chr10	20776384	20779798	-	CDS,three_prime_UTR
3	LOC_Os01g36630	jmjC domain-containing protein 4, putative, expressed	gene	jmjC domain-containing protein 4, putative, expressed	chr1	20321653	20325331	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g19350	OsLonP1 - Putative Lon protease homologue, expressed	gene	OsLonP1 - Putative Lon protease homologue, expressed	chr3	10886434	10897707	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g33420	DNA-binding protein S1FA, putative, expressed	gene	DNA-binding protein S1FA, putative, expressed	chr4	20057268	20058859	-	CDS,promoter
3	LOC_Os08g33630	uncharacterized protein family UPF0016 domain containing protein, expressed	gene	uncharacterized protein family UPF0016 domain containing protein, expressed	chr8	20997347	21001233	-	CDS,three_prime_UTR
3	LOC_Os12g40790	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr12	25214104	25220346	-	CDS,three_prime_UTR
3	LOC_Os03g22700	cyclin-dependent kinase C-2, putative, expressed	gene	cyclin-dependent kinase C-2, putative, expressed	chr3	13109630	13114454	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g47605	expressed protein	gene	expressed protein	chr2	29082664	29088201	-	CDS
3	LOC_Os03g44230	transmembrane amino acid transporter protein, putative, expressed	gene	transmembrane amino acid transporter protein, putative, expressed	chr3	24848251	24852456	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g20630	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr2	12155721	12158217	-	CDS
3	LOC_Os05g27930	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr5	16239396	16242867	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g52420	peptidase, M24 family protein, putative, expressed	gene	peptidase, M24 family protein, putative, expressed	chr2	32075413	32079700	-	CDS,three_prime_UTR
3	LOC_Os02g08490	chaperone protein clpB 1, putative, expressed	gene	chaperone protein clpB 1, putative, expressed	chr2	4567614	4573046	-	CDS,promoter,downstream
3	LOC_Os08g09730	OsFBX273 - F-box domain containing protein, expressed	gene	OsFBX273 - F-box domain containing protein, expressed	chr8	5622666	5625690	+	CDS
3	LOC_Os01g64750	sterol 3-beta-glucosyltransferase, putative, expressed	gene	sterol 3-beta-glucosyltransferase, putative, expressed	chr1	37565008	37574949	+	CDS
3	LOC_Os10g37260	fringe-related protein, putative, expressed	gene	fringe-related protein, putative, expressed	chr10	19880935	19885862	-	three_prime_UTR,promoter
3	LOC_Os02g43370	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr2	26164518	26169101	-	CDS,three_prime_UTR
3	LOC_Os05g41460	cysteine proteinase inhibitor precursor protein, putative, expressed	gene	cysteine proteinase inhibitor precursor protein, putative, expressed	chr5	24217021	24219275	-	three_prime_UTR,promoter
3	LOC_Os03g08700	expressed protein	gene	expressed protein	chr3	4481884	4488524	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g16080	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr3	8864902	8868158	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g42770	type II intron maturase protein, putative, expressed	gene	type II intron maturase protein, putative, expressed	chr6	25710871	25713684	-	CDS,promoter
3	LOC_Os02g34690	transmembrane 9 superfamily member, putative, expressed	gene	transmembrane 9 superfamily member, putative, expressed	chr2	20805472	20809764	+	CDS,three_prime_UTR
3	LOC_Os11g05090	peptidyl-prolyl isomerase, putative, expressed	gene	peptidyl-prolyl isomerase, putative, expressed	chr11	2225663	2229801	+	CDS,three_prime_UTR,promoter
3	LOC_Os12g38560	expressed protein	gene	expressed protein	chr12	23640982	23643848	+	CDS,three_prime_UTR
3	LOC_Os01g64262	hydrolase, alpha/beta fold family, putative, expressed	gene	hydrolase, alpha/beta fold family, putative, expressed	chr1	37309786	37313693	-	three_prime_UTR,downstream
3	LOC_Os11g04930	ASH-like SPRY domain containing protein, putative, expressed	gene	ASH-like SPRY domain containing protein, putative, expressed	chr11	2099707	2103064	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g57220	secretory carrier-associated membrane protein, putative, expressed	gene	secretory carrier-associated membrane protein, putative, expressed	chr1	33058143	33064348	+	CDS,three_prime_UTR,promoter
3	LOC_Os02g10810	protein of unknown function domain containing protein, expressed	gene	protein of unknown function domain containing protein, expressed	chr2	5740408	5742520	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g48810	PHD-finger family protein, expressed	gene	PHD-finger family protein, expressed	chr2	29865499	29869486	+	CDS,three_prime_UTR
3	LOC_Os01g67000	membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed	gene	membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed	chr1	38909949	38914449	-	CDS,three_prime_UTR
3	LOC_Os09g23640	ABC-2 type transporter domain containing protein	gene	ABC-2 type transporter domain containing protein	chr9	14045753	14049423	+	CDS,downstream
3	LOC_Os06g30060	expressed protein	gene	expressed protein	chr6	17310239	17317697	+	CDS,three_prime_UTR
3	LOC_Os06g05740	expressed protein	gene	expressed protein	chr6	2588009	2591268	-	CDS,three_prime_UTR
3	LOC_Os02g37910	expressed protein	gene	expressed protein	chr2	22905090	22909939	-	CDS,downstream
3	LOC_Os12g07450	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr12	3671804	3678298	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g56230	polyprenyl synthetase, putative, expressed	gene	polyprenyl synthetase, putative, expressed	chr4	33339619	33343343	-	CDS
3	LOC_Os08g28030	retrotransposon protein, putative, Ty1-copia subclass, expressed	gene	retrotransposon protein, putative, Ty1-copia subclass, expressed	chr8	17072117	17074494	-	three_prime_UTR
3	LOC_Os01g55290	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr1	31824922	31829138	-	CDS,three_prime_UTR
3	LOC_Os12g03990	dual specificity protein phosphatase, putative, expressed	gene	dual specificity protein phosphatase, putative, expressed	chr12	1651554	1654465	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g02050	expressed protein	gene	expressed protein	chr12	609165	611434	+	CDS,downstream
3	LOC_Os08g31110	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr8	19213116	19215096	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g43060	retrotransposon, putative, centromere-specific, expressed	gene	retrotransposon, putative, centromere-specific, expressed	chr5	24940543	24952473	+	CDS
3	LOC_Os03g62500	CGMC_GSK.5 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	gene	CGMC_GSK.5 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	chr3	35378651	35384931	-	CDS,three_prime_UTR,downstream
3	LOC_Os08g31830	UPF0041 domain containing protein, putative, expressed	gene	UPF0041 domain containing protein, putative, expressed	chr8	19733006	19736518	-	CDS,downstream
3	LOC_Os07g40620	saccharopine dehydrogenase, putative, expressed	gene	saccharopine dehydrogenase, putative, expressed	chr7	24340197	24344977	+	CDS
3	LOC_Os06g46570	galactosyltransferase, putative, expressed	gene	galactosyltransferase, putative, expressed	chr6	28274645	28278477	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g51084	1,4-alpha-glucan-branching enzyme, chloroplast precursor, putative, expressed	gene	1,4-alpha-glucan-branching enzyme, chloroplast precursor, putative, expressed	chr6	30896378	30904817	-	CDS,downstream
3	LOC_Os01g61930	SAC3/GANP family protein, putative, expressed	gene	SAC3/GANP family protein, putative, expressed	chr1	35843632	35853936	+	CDS,three_prime_UTR
3	LOC_Os02g04970	expressed protein	gene	expressed protein	chr2	2331667	2345503	+	CDS
3	LOC_Os01g51430	green ripe-like, putative, expressed	gene	green ripe-like, putative, expressed	chr1	29571608	29574661	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g13730	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr1	7678030	7684923	+	CDS,promoter
3	LOC_Os03g21740	valyl-tRNA synthetase, putative, expressed	gene	valyl-tRNA synthetase, putative, expressed	chr3	12421200	12431416	-	three_prime_UTR
3	LOC_Os01g16110	la domain containing protein, putative, expressed	gene	la domain containing protein, putative, expressed	chr1	9073613	9082795	+	CDS
3	LOC_Os11g07510	growth regulator related protein, putative, expressed	gene	growth regulator related protein, putative, expressed	chr11	3804819	3812603	+	CDS,three_prime_UTR
3	LOC_Os01g03710	mannose-6-phosphate isomerase, putative, expressed	gene	mannose-6-phosphate isomerase, putative, expressed	chr1	1533135	1538627	+	CDS,three_prime_UTR
3	LOC_Os10g42800	AMP-binding enzyme, putative	gene	AMP-binding enzyme, putative	chr10	23011693	23015058	-	CDS,downstream
3	LOC_Os08g41270	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	gene	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	chr8	26059752	26067127	+	CDS,three_prime_UTR
3	LOC_Os09g27570	OsFBA3 - F-box and FBA domain containing protein, expressed	gene	OsFBA3 - F-box and FBA domain containing protein, expressed	chr9	16747246	16750290	-	CDS,three_prime_UTR
3	LOC_Os09g06499	sulfate transporter 4.1, chloroplast precursor, putative, expressed	gene	sulfate transporter 4.1, chloroplast precursor, putative, expressed	chr9	3072884	3091870	+	CDS
3	LOC_Os02g50280	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr2	30693121	30695746	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g08560	multidrug resistance-associated protein 11, putative, expressed	gene	multidrug resistance-associated protein 11, putative, expressed	chr6	4249729	4263344	+	CDS,downstream
3	LOC_Os01g70120	expressed protein	gene	expressed protein	chr1	40583340	40585037	+	three_prime_UTR,downstream
3	LOC_Os08g09900	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr8	5712948	5718163	-	CDS,three_prime_UTR
3	LOC_Os03g01365	protein phosphatase-2c, putative	gene	protein phosphatase-2c, putative	chr3	276183	277705	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g10460	expressed protein	gene	expressed protein	chr3	5323622	5327327	+	CDS,three_prime_UTR
3	LOC_Os02g42920	DTA2, putative, expressed	gene	DTA2, putative, expressed	chr2	25810059	25815011	+	CDS
3	LOC_Os01g56640	transcription factor jumonji, putative, expressed	gene	transcription factor jumonji, putative, expressed	chr1	32674396	32680363	-	three_prime_UTR,CDS,promoter
3	LOC_Os11g13420	RNA binding protein, putative, expressed	gene	RNA binding protein, putative, expressed	chr11	7342010	7344570	-	three_prime_UTR,promoter,downstream
3	LOC_Os04g01990	pentatricopeptide domain containing protein, putative, expressed	gene	pentatricopeptide domain containing protein, putative, expressed	chr4	612779	615346	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g44740	chaperonin, putative, expressed	gene	chaperonin, putative, expressed	chr7	26704898	26706893	+	three_prime_UTR,downstream
3	LOC_Os08g44650	expressed protein	gene	expressed protein	chr8	28072155	28074422	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g31210	bile acid sodium symporter family protein, putative, expressed	gene	bile acid sodium symporter family protein, putative, expressed	chr4	18503977	18509124	+	CDS,three_prime_UTR
3	LOC_Os06g39040	dehydrogenase/reductase SDR family member 12, putative, expressed	gene	dehydrogenase/reductase SDR family member 12, putative, expressed	chr6	23180237	23183510	+	CDS,three_prime_UTR
3	LOC_Os11g15010	transposon protein, putative, Mutator sub-class, expressed	gene	transposon protein, putative, Mutator sub-class, expressed	chr11	8442183	8444190	-	three_prime_UTR,promoter,downstream
3	LOC_Os02g19510	lysine ketoglutarate reductase trans-splicing related 1, putative, expressed	gene	lysine ketoglutarate reductase trans-splicing related 1, putative, expressed	chr2	11399631	11404043	+	CDS,three_prime_UTR
3	LOC_Os04g42290	methyladenine glycosylase, putative, expressed	gene	methyladenine glycosylase, putative, expressed	chr4	24832075	24835417	+	CDS,three_prime_UTR
3	LOC_Os10g10130	OsWAK112d - OsWAK receptor-like protein kinase, expressed	gene	OsWAK112d - OsWAK receptor-like protein kinase, expressed	chr10	5554559	5561117	-	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os08g34210	aldehyde dehydrogenase, putative, expressed	gene	aldehyde dehydrogenase, putative, expressed	chr8	21443074	21448120	+	CDS,downstream
3	LOC_Os05g08850	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr5	4885372	4887988	+	three_prime_UTR,downstream
3	LOC_Os07g32420	bromodomain domain containing protein, expressed	gene	bromodomain domain containing protein, expressed	chr7	19280745	19288780	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g12840	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr2	6771313	6778383	+	CDS
3	LOC_Os06g21600	selenoprotein O, putative, expressed	gene	selenoprotein O, putative, expressed	chr6	12455760	12461589	-	CDS
3	LOC_Os07g48160	alpha-galactosidase precursor, putative, expressed	gene	alpha-galactosidase precursor, putative, expressed	chr7	28763431	28768267	+	CDS,three_prime_UTR
3	LOC_Os08g05510	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr8	2933789	2939200	+	CDS,three_prime_UTR
3	LOC_Os12g40510	calcineurin B, putative, expressed	gene	calcineurin B, putative, expressed	chr12	25029621	25034667	+	CDS,three_prime_UTR
3	LOC_Os07g44950	bZIP transcription factor domain containing protein, expressed	gene	bZIP transcription factor domain containing protein, expressed	chr7	26808802	26812258	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g49900	ABC transporter family protein, putative, expressed	gene	ABC transporter family protein, putative, expressed	chr4	29569807	29576987	+	five_prime_UTR,CDS,promoter
3	LOC_Os05g05320	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr5	2618143	2624275	-	CDS,three_prime_UTR
3	LOC_Os08g36980	AGAP010609-PA, putative, expressed	gene	AGAP010609-PA, putative, expressed	chr8	23384173	23386009	+	three_prime_UTR,downstream
3	LOC_Os05g08440	OsFBX163 - F-box domain containing protein, expressed	gene	OsFBX163 - F-box domain containing protein, expressed	chr5	4610847	4612733	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g19160	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr1	10818327	10821389	-	five_prime_UTR,CDS
3	LOC_Os07g06950	ubiquitin carboxyl-terminal hydrolase, putative, expressed	gene	ubiquitin carboxyl-terminal hydrolase, putative, expressed	chr7	3410720	3423508	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g05280	oxidoreductase family, NAD-binding Rossmann fold containing protein, expressed	gene	oxidoreductase family, NAD-binding Rossmann fold containing protein, expressed	chr8	2755969	2764158	-	CDS
3	LOC_Os03g12530	cation efflux family protein, putative, expressed	gene	cation efflux family protein, putative, expressed	chr3	6635576	6640550	+	CDS,three_prime_UTR
3	LOC_Os04g42120	N-acetyltransferase ESCO2, putative, expressed	gene	N-acetyltransferase ESCO2, putative, expressed	chr4	24750318	24753643	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g29464	RecF/RecN/SMC N terminal domain containing protein, expressed	gene	RecF/RecN/SMC N terminal domain containing protein, expressed	chr2	17484104	17501916	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g27030	lipid phosphatase protein, putative, expressed	gene	lipid phosphatase protein, putative, expressed	chr8	16511012	16515182	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os11g01550	DUF260 domain containing protein, putative, expressed	gene	DUF260 domain containing protein, putative, expressed	chr11	313532	314457	+	five_prime_UTR,promoter
3	LOC_Os03g07130	RING finger protein 13, putative, expressed	gene	RING finger protein 13, putative, expressed	chr3	3645869	3650576	+	CDS,three_prime_UTR
3	LOC_Os05g30010	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr5	17301154	17308569	-	CDS,three_prime_UTR
3	LOC_Os01g44050	siroheme synthase, putative, expressed	gene	siroheme synthase, putative, expressed	chr1	25233617	25237121	+	CDS,three_prime_UTR,promoter
3	LOC_Os11g34320	regulator of chromosome condensation, putative, expressed	gene	regulator of chromosome condensation, putative, expressed	chr11	19653041	19659157	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g14430	APOBEC1 complementation factor, putative, expressed	gene	APOBEC1 complementation factor, putative, expressed	chr11	8096480	8101158	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g42395	DNA-directed RNA polymerase II subunit RPB9, putative, expressed	gene	DNA-directed RNA polymerase II subunit RPB9, putative, expressed	chr7	25368227	25370862	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g13404	ATP binding protein, putative, expressed	gene	ATP binding protein, putative, expressed	chr1	7459348	7464534	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g02620	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr12	905322	907669	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g51400	AAA family ATPase, putative, expressed	gene	AAA family ATPase, putative, expressed	chr2	31467100	31477165	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g53120	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr4	31452992	31459688	+	CDS
3	LOC_Os02g44510	UDP-glucose glycoprotein glucosyltransferase 1 precursor, putative, expressed	gene	UDP-glucose glycoprotein glucosyltransferase 1 precursor, putative, expressed	chr2	26937222	26945574	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os07g41810	stress responsive A/B Barrel domain containing protein, expressed	gene	stress responsive A/B Barrel domain containing protein, expressed	chr7	25044262	25047478	+	three_prime_UTR,promoter
3	LOC_Os03g25940	cystathionine gamma-synthase, putative, expressed	gene	cystathionine gamma-synthase, putative, expressed	chr3	14848933	14853141	-	CDS,three_prime_UTR
3	LOC_Os01g46380	ketol-acid reductoisomerase, chloroplast precursor, putative, expressed	gene	ketol-acid reductoisomerase, chloroplast precursor, putative, expressed	chr1	26391120	26395304	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g06760	exocyst complex component 6, putative, expressed	gene	exocyst complex component 6, putative, expressed	chr3	3434020	3438540	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os09g37280	peroxisomal multifunctional enzyme type 2, putative, expressed	gene	peroxisomal multifunctional enzyme type 2, putative, expressed	chr9	21537399	21542468	-	CDS
3	LOC_Os06g02560	growth-regulating factor, putative, expressed	gene	growth-regulating factor, putative, expressed	chr6	892103	895377	-	three_prime_UTR,promoter
3	LOC_Os03g58620	small multi-drug export protein, putative, expressed	gene	small multi-drug export protein, putative, expressed	chr3	33380960	33384027	-	CDS,downstream
3	LOC_Os09g27860	expressed protein	gene	expressed protein	chr9	16944129	16947034	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g21360	N-dimethylguanosine tRNA methyltransferase, putative, expressed	gene	N-dimethylguanosine tRNA methyltransferase, putative, expressed	chr10	10861001	10868295	+	three_prime_UTR,CDS
3	LOC_Os08g43230	TraB family protein, putative, expressed	gene	TraB family protein, putative, expressed	chr8	27326727	27328642	+	CDS,three_prime_UTR
3	LOC_Os02g57220	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr2	35051061	35056660	-	CDS,three_prime_UTR
3	LOC_Os02g34600	CAMK_CAMK_like.13 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.13 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr2	20740394	20745511	-	CDS,three_prime_UTR
3	LOC_Os03g60130	transcription elongation factor protein, putative, expressed	gene	transcription elongation factor protein, putative, expressed	chr3	34187752	34190862	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g19240	AMP-binding enzyme, putative, expressed	gene	AMP-binding enzyme, putative, expressed	chr3	10814725	10819043	-	CDS
3	LOC_Os04g44290	expressed protein	gene	expressed protein	chr4	26047729	26052380	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g14510	glucose-6-phosphate isomerase, putative, expressed	gene	glucose-6-phosphate isomerase, putative, expressed	chr6	8151236	8158386	+	CDS,three_prime_UTR
3	LOC_Os06g12120	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	gene	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	chr6	6483044	6487554	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g20120	expressed protein	gene	expressed protein	chr1	11425312	11429972	-	CDS,three_prime_UTR
3	LOC_Os10g25090	STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed	gene	STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed	chr10	12851773	12857280	-	CDS
3	LOC_Os07g35920	expressed protein	gene	expressed protein	chr7	21485611	21503551	-	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os01g19470	nodal modulator 1 precursor, putative, expressed	gene	nodal modulator 1 precursor, putative, expressed	chr1	11024419	11037846	-	CDS
3	LOC_Os05g45750	ATP-dependent Clp protease ATP-binding subunit clpX, putative, expressed	gene	ATP-dependent Clp protease ATP-binding subunit clpX, putative, expressed	chr5	26437930	26441628	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g45160	SAC3/GANP family protein, expressed	gene	SAC3/GANP family protein, expressed	chr7	26951452	26961733	+	CDS,downstream
3	LOC_Os10g26280	ORC3 - Putative origin recognition complex subunit 3, expressed	gene	ORC3 - Putative origin recognition complex subunit 3, expressed	chr10	13529267	13535201	-	CDS
3	LOC_Os06g05660	NAP domain containing protein, putative, expressed	gene	NAP domain containing protein, putative, expressed	chr6	2557016	2561243	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g57210	katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed	gene	katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed	chr1	33049591	33057453	+	CDS,three_prime_UTR
3	LOC_Os05g38160	prenylated rab acceptor, putative, expressed	gene	prenylated rab acceptor, putative, expressed	chr5	22321579	22325248	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g22050	CAMK_KIN1/SNF1/Nim1_like.16 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_KIN1/SNF1/Nim1_like.16 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr3	12629423	12633900	-	CDS
3	LOC_Os01g65220	XRN 5'-3' exonuclease N-terminus domain containing protein, expressed	gene	XRN 5'-3' exonuclease N-terminus domain containing protein, expressed	chr1	37843880	37851756	-	CDS,three_prime_UTR,downstream
3	LOC_Os02g26390	expressed protein	gene	expressed protein	chr2	15490019	15493184	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os01g01484	light-mediated development protein DET1, putative, expressed	gene	light-mediated development protein DET1, putative, expressed	chr1	247706	255878	-	CDS,three_prime_UTR
3	LOC_Os02g03260	3-isopropylmalate dehydratase large subunit 2, putative, expressed	gene	3-isopropylmalate dehydratase large subunit 2, putative, expressed	chr2	1304820	1309845	-	CDS,promoter
3	LOC_Os05g15150	leucyl-tRNA synthetase, cytoplasmic, putative, expressed	gene	leucyl-tRNA synthetase, cytoplasmic, putative, expressed	chr5	8590857	8596945	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os02g09180	CUE domain containing protein, expressed	gene	CUE domain containing protein, expressed	chr2	4717662	4720655	+	CDS,three_prime_UTR,promoter
3	LOC_Os12g06640	homeodomain, putative, expressed	gene	homeodomain, putative, expressed	chr12	3217986	3221910	-	three_prime_UTR
3	LOC_Os02g53740	XI-I, putative, expressed	gene	XI-I, putative, expressed	chr2	32898712	32907903	+	CDS,three_prime_UTR
3	LOC_Os09g14880	transposon protein, putative, Pong sub-class, expressed	gene	transposon protein, putative, Pong sub-class, expressed	chr9	8878453	8882844	-	five_prime_UTR,CDS
3	LOC_Os12g03410	expressed protein	gene	expressed protein	chr12	1322539	1325834	-	CDS
3	LOC_Os10g35090	Rf1, mitochondrial precursor, putative, expressed	gene	Rf1, mitochondrial precursor, putative, expressed	chr10	18646625	18650911	-	three_prime_UTR,promoter
3	LOC_Os12g42020	AGC_PVPK_like_kin82y.20 - ACG kinases include homologs to PKA, PKG and PKC, expressed	gene	AGC_PVPK_like_kin82y.20 - ACG kinases include homologs to PKA, PKG and PKC, expressed	chr12	26021615	26023396	+	three_prime_UTR,downstream
3	LOC_Os05g49910	expressed protein	gene	expressed protein	chr5	28566215	28569547	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g01222	formyl transferase, putative, expressed	gene	formyl transferase, putative, expressed	chr3	143603	146769	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g25560	OsSCP23 - Putative Serine Carboxypeptidase homologue, expressed	gene	OsSCP23 - Putative Serine Carboxypeptidase homologue, expressed	chr4	14803984	14809994	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g09384	expressed protein	gene	expressed protein	chr7	4939555	4943599	+	CDS,three_prime_UTR
3	LOC_Os05g45860	glucan endo-1,3-beta-glucosidase precursor, putative, expressed	gene	glucan endo-1,3-beta-glucosidase precursor, putative, expressed	chr5	26507791	26511323	-	CDS,three_prime_UTR
3	LOC_Os12g41430	expressed protein	gene	expressed protein	chr12	25630350	25632961	-	three_prime_UTR
3	LOC_Os10g40570	flavin-containing monooxygenase family protein, putative, expressed	gene	flavin-containing monooxygenase family protein, putative, expressed	chr10	21652892	21655657	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g43582	tRNA methyltran, putative, expressed	gene	tRNA methyltran, putative, expressed	chr5	25284155	25286807	+	CDS,three_prime_UTR
3	LOC_Os01g07100	expressed protein	gene	expressed protein	chr1	3335250	3342223	+	CDS,downstream
3	LOC_Os01g70960	cytochrome c1-1, heme protein, mitochondrial precursor, putative, expressed	gene	cytochrome c1-1, heme protein, mitochondrial precursor, putative, expressed	chr1	41073386	41078269	+	three_prime_UTR,CDS
3	LOC_Os03g18380	ubiquitin-activating enzyme, putative, expressed	gene	ubiquitin-activating enzyme, putative, expressed	chr3	10297887	10304329	-	CDS
3	LOC_Os04g54950	hypothetical protein	gene	hypothetical protein	chr4	32502951	32503924	-	CDS,promoter
3	LOC_Os09g12570	ubiquitin-conjugating enzyme, putative, expressed	gene	ubiquitin-conjugating enzyme, putative, expressed	chr9	7204126	7207212	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g53900	universal stress protein domain containing protein, putative, expressed	gene	universal stress protein domain containing protein, putative, expressed	chr3	30894186	30895922	-	three_prime_UTR,CDS,downstream
3	LOC_Os12g33160	RGH1A, putative, expressed	gene	RGH1A, putative, expressed	chr12	20033006	20038372	-	CDS,three_prime_UTR
3	LOC_Os08g25700	expressed protein	gene	expressed protein	chr8	15635045	15639286	+	CDS,three_prime_UTR
3	LOC_Os01g34660	RNAse P Rpr2/Rpp21 subunit domain containing protein, expressed	gene	RNAse P Rpr2/Rpp21 subunit domain containing protein, expressed	chr1	19109863	19112270	-	CDS
3	LOC_Os11g45050	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr11	26789480	26792581	+	CDS,downstream
3	LOC_Os03g63500	ATPase, AFG1 family domain containing protein, expressed	gene	ATPase, AFG1 family domain containing protein, expressed	chr3	35861567	35868360	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os08g26870	wound responsive protein, putative, expressed	gene	wound responsive protein, putative, expressed	chr8	16337619	16342573	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g13370	expressed protein	gene	expressed protein	chr2	7131235	7133480	-	three_prime_UTR,promoter,downstream
3	LOC_Os12g34330	protein binding protein, putative, expressed	gene	protein binding protein, putative, expressed	chr12	20772629	20779912	-	CDS,three_prime_UTR
3	LOC_Os03g02560	cyclin-like F-box, putative, expressed	gene	cyclin-like F-box, putative, expressed	chr3	944957	948060	+	CDS,three_prime_UTR
3	LOC_Os07g48690	DUF630/DUF632 domains containing protein, putative, expressed	gene	DUF630/DUF632 domains containing protein, putative, expressed	chr7	29161424	29165582	+	CDS
3	LOC_Os04g20220	elongation factor Tu, putative, expressed	gene	elongation factor Tu, putative, expressed	chr4	11263197	11277079	+	CDS
3	LOC_Os10g36710	CAMK_CAMK_like.40 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.40 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr10	19569294	19574450	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g11020	DAG protein, chloroplast precursor, putative, expressed	gene	DAG protein, chloroplast precursor, putative, expressed	chr11	6083731	6087234	-	CDS,three_prime_UTR
3	LOC_Os07g07690	PHD-finger domain containing protein, expressed	gene	PHD-finger domain containing protein, expressed	chr7	3858756	3867365	+	CDS,three_prime_UTR
3	LOC_Os01g08814	expressed protein	gene	expressed protein	chr1	4422892	4425884	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g33620	Leucine Rich Repeat domain containing protein, expressed	gene	Leucine Rich Repeat domain containing protein, expressed	chr9	19853812	19856904	-	CDS,promoter
3	LOC_Os04g51180	GPR89A, putative, expressed	gene	GPR89A, putative, expressed	chr4	30126393	30131177	-	three_prime_UTR,CDS
3	LOC_Os02g52744	DCL, chloroplast precursor, putative, expressed	gene	DCL, chloroplast precursor, putative, expressed	chr2	32255707	32261665	-	CDS,three_prime_UTR
3	LOC_Os08g01360	RING finger protein 13, putative, expressed	gene	RING finger protein 13, putative, expressed	chr8	227213	231453	+	CDS,three_prime_UTR
3	LOC_Os06g06400	NBS-LRR type disease resistance protein, putative, expressed	gene	NBS-LRR type disease resistance protein, putative, expressed	chr6	2984095	2989868	-	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os02g58560	1,3-beta-glucan synthase component, putative, expressed	gene	1,3-beta-glucan synthase component, putative, expressed	chr2	35792480	35798631	+	CDS,downstream
3	LOC_Os11g04420	AIG2-like family domain containing protein, expressed	gene	AIG2-like family domain containing protein, expressed	chr11	1837509	1846870	-	three_prime_UTR
3	LOC_Os10g22890	receptor-like kinase, putative, expressed	gene	receptor-like kinase, putative, expressed	chr10	11822490	11828731	+	CDS,downstream
3	LOC_Os03g17710	splicing factor, arginine/serine-rich, putative, expressed	gene	splicing factor, arginine/serine-rich, putative, expressed	chr3	9851647	9854979	-	CDS,three_prime_UTR
3	LOC_Os02g57640	KH domain containing protein, putative, expressed	gene	KH domain containing protein, putative, expressed	chr2	35291687	35296394	+	CDS,three_prime_UTR,promoter
3	LOC_Os06g46372	dehydrogenase, putative, expressed	gene	dehydrogenase, putative, expressed	chr6	28138177	28141557	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g50020	hypothetical protein	gene	hypothetical protein	chr1	28734704	28737178	-	CDS,promoter
3	LOC_Os06g17950	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr6	10434817	10440908	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os07g01540	Ser/Thr protein phosphatase family protein, putative, expressed	gene	Ser/Thr protein phosphatase family protein, putative, expressed	chr7	334223	342722	-	CDS,three_prime_UTR
3	LOC_Os04g35480	CDK5RAP1, putative, expressed	gene	CDK5RAP1, putative, expressed	chr4	21419690	21423379	-	CDS,three_prime_UTR
3	LOC_Os05g32580	glycine-rich protein, putative, expressed	gene	glycine-rich protein, putative, expressed	chr5	19008936	19015795	+	CDS,three_prime_UTR
3	LOC_Os01g69120	uncharacterized RNA methyltransferase pc1998, putative, expressed	gene	uncharacterized RNA methyltransferase pc1998, putative, expressed	chr1	40174606	40180590	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g10710	R-interacting factor 1, putative, expressed	gene	R-interacting factor 1, putative, expressed	chr9	5835661	5842910	-	CDS,three_prime_UTR
3	LOC_Os09g20550	zinc finger protein-related, putative, expressed	gene	zinc finger protein-related, putative, expressed	chr9	12380751	12386954	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g48410	copper chaperone for superoxide dismutase, putative, expressed	gene	copper chaperone for superoxide dismutase, putative, expressed	chr4	28689210	28693706	+	CDS,three_prime_UTR
3	LOC_Os05g15510	cellulase, putative, expressed	gene	cellulase, putative, expressed	chr5	8766671	8774314	-	CDS,three_prime_UTR
3	LOC_Os01g14810	5-nucleotidase domain-containing protein, putative, expressed	gene	5-nucleotidase domain-containing protein, putative, expressed	chr1	8274474	8282966	+	CDS,three_prime_UTR
3	LOC_Os03g58240	GTP binding protein, putative, expressed	gene	GTP binding protein, putative, expressed	chr3	33173868	33180099	+	CDS,downstream
3	LOC_Os11g09170	hydrolase, acting on carbon-nitrogen, putative, expressed	gene	hydrolase, acting on carbon-nitrogen, putative, expressed	chr11	4914681	4919536	+	CDS,three_prime_UTR
3	LOC_Os03g15240	hypothetical protein	gene	hypothetical protein	chr3	8336531	8338435	+	CDS,downstream
3	LOC_Os07g05560	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	2598063	2599841	-	CDS,promoter,downstream
3	LOC_Os03g30300	6-phosphogluconolactonase, putative, expressed	gene	6-phosphogluconolactonase, putative, expressed	chr3	17286839	17291936	-	CDS,three_prime_UTR
3	LOC_Os02g01280	T-complex protein, putative, expressed	gene	T-complex protein, putative, expressed	chr2	158662	163732	+	CDS,three_prime_UTR
3	LOC_Os05g35360	beta-galactosidase 7 precursor, putative, expressed	gene	beta-galactosidase 7 precursor, putative, expressed	chr5	20926970	20935753	-	CDS
3	LOC_Os03g40930	expressed protein	gene	expressed protein	chr3	22742817	22745405	-	three_prime_UTR,promoter
3	LOC_Os08g29170	dehydrogenase, putative, expressed	gene	dehydrogenase, putative, expressed	chr8	17852801	17854975	-	three_prime_UTR,promoter
3	LOC_Os11g44660	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr11	26535916	26538083	+	CDS,promoter
3	LOC_Os03g01216	phosphatidylserine decarboxylase, putative, expressed	gene	phosphatidylserine decarboxylase, putative, expressed	chr3	138453	143463	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g30550	tRNA methyltransferase, putative, expressed	gene	tRNA methyltransferase, putative, expressed	chr10	15813497	15822378	-	CDS
3	LOC_Os03g46910	pyruvate kinase, putative, expressed	gene	pyruvate kinase, putative, expressed	chr3	26519674	26523770	-	CDS,three_prime_UTR
3	LOC_Os07g49230	ubiquitin-activating enzyme, putative, expressed	gene	ubiquitin-activating enzyme, putative, expressed	chr7	29477766	29482667	+	CDS,three_prime_UTR
3	LOC_Os07g32230	domain of unknown function domain containing protein, expressed	gene	domain of unknown function domain containing protein, expressed	chr7	19160255	19164074	-	CDS,three_prime_UTR
3	LOC_Os08g02850	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr8	1196179	1199094	-	CDS
3	LOC_Os10g26400	uncharacterized oxidoreductase, putative, expressed	gene	uncharacterized oxidoreductase, putative, expressed	chr10	13640032	13642913	+	CDS,three_prime_UTR
3	LOC_Os08g30790	hypersensitive-induced response protein, putative, expressed	gene	hypersensitive-induced response protein, putative, expressed	chr8	19009071	19013287	+	CDS
3	LOC_Os01g33784	lipase family protein, putative, expressed	gene	lipase family protein, putative, expressed	chr1	18592244	18597044	+	CDS,three_prime_UTR
3	LOC_Os01g16520	glutamyl-tRNA synthetase, cytoplasmic, putative, expressed	gene	glutamyl-tRNA synthetase, cytoplasmic, putative, expressed	chr1	9372692	9377180	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g29350	von Willebrand factor type A domain containing protein, expressed	gene	von Willebrand factor type A domain containing protein, expressed	chr3	16694568	16703263	-	CDS
3	LOC_Os12g08800	las1-like family protein, putative, expressed	gene	las1-like family protein, putative, expressed	chr12	4526350	4531878	+	CDS,downstream
3	LOC_Os04g46390	chaperone protein dnaJ, putative, expressed	gene	chaperone protein dnaJ, putative, expressed	chr4	27320348	27324909	+	CDS,three_prime_UTR
3	LOC_Os04g09800	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A, putative	gene	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A, putative	chr4	5250182	5255975	-	CDS
3	LOC_Os10g36250	tetratricopeptide repeat, putative, expressed	gene	tetratricopeptide repeat, putative, expressed	chr10	19302674	19308068	-	CDS,downstream
3	LOC_Os06g03800	pollen ankyrin, putative, expressed	gene	pollen ankyrin, putative, expressed	chr6	1519744	1525082	+	CDS,three_prime_UTR
3	LOC_Os05g45220	50S ribosomal protein L20, putative, expressed	gene	50S ribosomal protein L20, putative, expressed	chr5	26186931	26188716	-	CDS
3	LOC_Os10g03620	OsFBX344 - F-box domain containing protein, expressed	gene	OsFBX344 - F-box domain containing protein, expressed	chr10	1561567	1564312	-	CDS
3	LOC_Os06g29400	surp module family protein, putative, expressed	gene	surp module family protein, putative, expressed	chr6	16824603	16835212	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g17550	conserved hypothetical protein	gene	conserved hypothetical protein	chr12	10056128	10065032	-	CDS,promoter
3	LOC_Os09g13940	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr9	8198884	8202350	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os05g01360	expressed protein	gene	expressed protein	chr5	218992	226339	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g07080	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr1	3327533	3330963	-	CDS,promoter,downstream
3	LOC_Os01g56960	acid phosphatase, putative	gene	acid phosphatase, putative	chr1	32902866	32904619	-	CDS,promoter
3	LOC_Os03g55310	SWIB/MDM2 domain containing protein, expressed	gene	SWIB/MDM2 domain containing protein, expressed	chr3	31462804	31464654	-	three_prime_UTR,promoter
3	LOC_Os02g44910	transmembrane protein, putative, expressed	gene	transmembrane protein, putative, expressed	chr2	27202333	27206778	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g33240	endoribonuclease, putative, expressed	gene	endoribonuclease, putative, expressed	chr7	19860616	19863550	+	CDS,three_prime_UTR
3	LOC_Os05g49750	expressed protein	gene	expressed protein	chr5	28477013	28481204	-	three_prime_UTR,CDS
3	LOC_Os03g11320	heparanase-like protein precursor, putative, expressed	gene	heparanase-like protein precursor, putative, expressed	chr3	5822515	5827114	+	CDS,downstream
3	LOC_Os02g15880	CPuORF16 - conserved peptide uORF-containing transcript, expressed	gene	CPuORF16 - conserved peptide uORF-containing transcript, expressed	chr2	8984105	8989570	-	CDS
3	LOC_Os08g33720	lactate/malate dehydrogenase, putative, expressed	gene	lactate/malate dehydrogenase, putative, expressed	chr8	21051946	21054848	-	CDS,three_prime_UTR
3	LOC_Os06g33570	cyclic nucleotide-gated ion channel 1, putative, expressed	gene	cyclic nucleotide-gated ion channel 1, putative, expressed	chr6	19543570	19552017	+	CDS
3	LOC_Os01g73290	hypothetical protein	gene	hypothetical protein	chr1	42473625	42474327	-	CDS,promoter
3	LOC_Os09g19980	GTP binding protein, putative, expressed	gene	GTP binding protein, putative, expressed	chr9	11957027	11960144	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g45670	src homology-3 domain protein 3, putative, expressed	gene	src homology-3 domain protein 3, putative, expressed	chr4	26830435	26834469	-	CDS
3	LOC_Os09g23160	annexin, putative, expressed	gene	annexin, putative, expressed	chr9	13705487	13710510	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g33730	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr7	20163256	20169168	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g28170	nucleobase-ascorbate transporter, putative, expressed	gene	nucleobase-ascorbate transporter, putative, expressed	chr8	17190657	17193187	+	CDS
3	LOC_Os03g58710	riboflavin biosynthesis protein-related, putative, expressed	gene	riboflavin biosynthesis protein-related, putative, expressed	chr3	33426092	33429585	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g13490	expressed protein	gene	expressed protein	chr1	7518617	7523433	+	three_prime_UTR
3	LOC_Os08g37605	riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed	gene	riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed	chr8	23826602	23831038	+	CDS,three_prime_UTR
3	LOC_Os02g20870	SNI1, putative, expressed	gene	SNI1, putative, expressed	chr2	12339725	12348539	-	CDS,three_prime_UTR
3	LOC_Os02g57070	3-5 exoribonuclease CSL4, putative, expressed	gene	3-5 exoribonuclease CSL4, putative, expressed	chr2	34935184	34938213	-	three_prime_UTR,promoter,downstream
3	LOC_Os07g10820	transporter-related, putative, expressed	gene	transporter-related, putative, expressed	chr7	5879067	5883359	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os08g08140	receptor-like kinase, putative, expressed	gene	receptor-like kinase, putative, expressed	chr8	4630723	4637682	+	CDS
3	LOC_Os11g38440	expressed protein	gene	expressed protein	chr11	22297664	22301551	+	CDS,downstream
3	LOC_Os08g01760	dehydrogenase, putative, expressed	gene	dehydrogenase, putative, expressed	chr8	457533	460415	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os09g33980	bromodomain protein 103, putative, expressed	gene	bromodomain protein 103, putative, expressed	chr9	20059107	20066133	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g42412	F-box/LRR-repeat protein 2, putative, expressed	gene	F-box/LRR-repeat protein 2, putative, expressed	chr2	25508639	25509778	-	CDS,three_prime_UTR
3	LOC_Os10g21930	OsFBK21 - F-box domain and kelch repeat containing protein, expressed	gene	OsFBK21 - F-box domain and kelch repeat containing protein, expressed	chr10	11229550	11232484	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g33876	expressed protein	gene	expressed protein	chr9	20000609	20006083	+	CDS,three_prime_UTR
3	LOC_Os07g10410	AP2 domain containing protein	gene	AP2 domain containing protein	chr7	5592911	5593711	+	CDS,promoter,downstream
3	LOC_Os06g09280	ATP-dependent RNA helicase, putative, expressed	gene	ATP-dependent RNA helicase, putative, expressed	chr6	4658378	4666062	+	CDS
3	LOC_Os06g49390	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr6	29925772	29930823	-	CDS
3	LOC_Os09g38730	26S protease regulatory subunit 6B, putative	gene	26S protease regulatory subunit 6B, putative	chr9	22260127	22261473	+	CDS,promoter,downstream
3	LOC_Os08g39310	SWIB/MDM2 domain containing protein, expressed	gene	SWIB/MDM2 domain containing protein, expressed	chr8	24834927	24839384	+	three_prime_UTR,downstream
3	LOC_Os10g33275	DEAD/DEAH box helicase domain containing protein, expressed	gene	DEAD/DEAH box helicase domain containing protein, expressed	chr10	17404236	17412971	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g39700	60S ribosomal protein L6, putative, expressed	gene	60S ribosomal protein L6, putative, expressed	chr4	23475690	23477898	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g19830	histone-lysine N-methyltransferase, putative, expressed	gene	histone-lysine N-methyltransferase, putative, expressed	chr9	11868806	11873416	+	CDS
3	LOC_Os02g57766	expressed protein	gene	expressed protein	chr2	35367235	35370007	-	CDS,three_prime_UTR
3	LOC_Os04g53520	expressed protein	gene	expressed protein	chr4	31695388	31709470	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os06g43590	SNF7 domain containing protein, putative, expressed	gene	SNF7 domain containing protein, putative, expressed	chr6	26214485	26217669	+	three_prime_UTR
3	LOC_Os01g24920	poly synthetase 2-B, putative, expressed	gene	poly synthetase 2-B, putative, expressed	chr1	14030338	14037762	+	CDS,downstream
3	LOC_Os03g22550	cation efflux family protein, putative, expressed	gene	cation efflux family protein, putative, expressed	chr3	12953310	12957139	+	CDS,promoter,downstream
3	LOC_Os04g20280	expressed protein	gene	expressed protein	chr4	11326129	11329523	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g23684	tyrosine aminotransferase, putative, expressed	gene	tyrosine aminotransferase, putative, expressed	chr6	13834594	13843082	+	CDS
3	LOC_Os12g22744	expressed protein	gene	expressed protein	chr12	12831166	12836584	+	three_prime_UTR
3	LOC_Os01g13150	metallo-beta-lactamase family protein, putative, expressed	gene	metallo-beta-lactamase family protein, putative, expressed	chr1	7324145	7331536	+	CDS
3	LOC_Os03g04410	aconitate hydratase protein, putative, expressed	gene	aconitate hydratase protein, putative, expressed	chr3	2025673	2032637	-	CDS
3	LOC_Os04g12920	hypothetical protein	gene	hypothetical protein	chr4	7132486	7132921	-	CDS,promoter,downstream
3	LOC_Os01g59320	expressed protein	gene	expressed protein	chr1	34292034	34294531	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os05g50830	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr5	29091980	29094792	+	three_prime_UTR,downstream
3	LOC_Os12g22810	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr12	12870771	12874418	+	CDS,three_prime_UTR
3	LOC_Os06g14030	potassium channel SKOR, putative, expressed	gene	potassium channel SKOR, putative, expressed	chr6	7798074	7805572	-	CDS
3	LOC_Os05g17849	expressed protein	gene	expressed protein	chr5	10266379	10269300	-	three_prime_UTR
3	LOC_Os09g32030	expressed protein	gene	expressed protein	chr9	19118866	19120831	-	three_prime_UTR,downstream
3	LOC_Os12g10640	uncharacterized protein ycf45, putative, expressed	gene	uncharacterized protein ycf45, putative, expressed	chr12	5683582	5688883	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g08730	early fruit mRNA, putative, expressed	gene	early fruit mRNA, putative, expressed	chr5	4786561	4789670	+	CDS
3	LOC_Os08g07880	phosphopantothenate--cysteine ligase, putative, expressed	gene	phosphopantothenate--cysteine ligase, putative, expressed	chr8	4429199	4433316	+	CDS,three_prime_UTR
3	LOC_Os09g01690	expressed protein	gene	expressed protein	chr9	489930	492986	+	three_prime_UTR,CDS
3	LOC_Os01g13430	importin-alpha re-exporter, putative, expressed	gene	importin-alpha re-exporter, putative, expressed	chr1	7476641	7481824	-	three_prime_UTR
3	LOC_Os05g09400	30S ribosomal protein S31, chloroplast precursor, putative, expressed	gene	30S ribosomal protein S31, chloroplast precursor, putative, expressed	chr5	5274177	5277743	-	three_prime_UTR,promoter,downstream
3	LOC_Os04g57154	expressed protein	gene	expressed protein	chr4	33873918	33879031	-	five_prime_UTR,CDS
3	LOC_Os03g13730	translocase of chloroplast 34, putative, expressed	gene	translocase of chloroplast 34, putative, expressed	chr3	7432977	7437020	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g51390	expressed protein	gene	expressed protein	chr2	31461526	31465694	+	three_prime_UTR
3	LOC_Os09g34870	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr9	20321406	20325291	+	CDS,promoter
3	LOC_Os06g12824	unknown	gene	unknown	chr6	7014818	7016181	+	three_prime_UTR
3	LOC_Os01g01295	expressed protein	gene	expressed protein	chr1	140936	143554	+	three_prime_UTR,downstream
3	LOC_Os01g34390	prenyltransferase, putative, expressed	gene	prenyltransferase, putative, expressed	chr1	18960273	18967960	-	CDS,three_prime_UTR
3	LOC_Os06g51400	expressed protein	gene	expressed protein	chr6	31131835	31135058	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g21880	coiled-coil domain-containing protein, putative, expressed	gene	coiled-coil domain-containing protein, putative, expressed	chr2	13006947	13013156	+	CDS
3	LOC_Os02g13770	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr2	7431305	7433852	+	CDS,three_prime_UTR
3	LOC_Os02g42314	ubiquitin-conjugating enzyme, putative, expressed	gene	ubiquitin-conjugating enzyme, putative, expressed	chr2	25444345	25448241	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g23810	enoyl-acyl-carrier-protein reductase NADH, chloroplast precursor, expressed	gene	enoyl-acyl-carrier-protein reductase NADH, chloroplast precursor, expressed	chr8	14411622	14416282	+	CDS,three_prime_UTR
3	LOC_Os02g53070	HYS1, putative, expressed	gene	HYS1, putative, expressed	chr2	32463689	32466790	-	three_prime_UTR,promoter
3	LOC_Os03g04450	expressed protein	gene	expressed protein	chr3	2064039	2066733	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g28870	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr5	16867801	16871840	+	CDS,three_prime_UTR
3	LOC_Os05g06420	expressed protein	gene	expressed protein	chr5	3291004	3294001	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g05150	expressed protein	gene	expressed protein	chr6	2284894	2285795	-	three_prime_UTR,promoter
3	LOC_Os12g40890	OsIAA30 - Auxin-responsive Aux/IAA gene family member, expressed	gene	OsIAA30 - Auxin-responsive Aux/IAA gene family member, expressed	chr12	25277210	25282627	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g28940	ATGRIP/GRIP, putative, expressed	gene	ATGRIP/GRIP, putative, expressed	chr7	16970966	16984080	+	CDS
3	LOC_Os03g06290	OsSub27 - Putative Subtilisin homologue, expressed	gene	OsSub27 - Putative Subtilisin homologue, expressed	chr3	3150509	3164234	-	CDS,downstream
3	LOC_Os03g03930	tRNA nucleotidyltransferase/polyA polymerase family protein, putative, expressed	gene	tRNA nucleotidyltransferase/polyA polymerase family protein, putative, expressed	chr3	1797692	1803322	-	CDS
3	LOC_Os09g15810	bifunctional protein folD, putative, expressed	gene	bifunctional protein folD, putative, expressed	chr9	9651177	9653971	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g41810	ribosomal protein L22, putative, expressed	gene	ribosomal protein L22, putative, expressed	chr8	26403291	26405813	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g66520	serine/threonine-protein kinase RIO-like, putative, expressed	gene	serine/threonine-protein kinase RIO-like, putative, expressed	chr1	38630300	38634608	-	CDS,three_prime_UTR
3	LOC_Os08g42440	CCT/B-box zinc finger protein, putative, expressed	gene	CCT/B-box zinc finger protein, putative, expressed	chr8	26790110	26794467	-	CDS,promoter
3	LOC_Os06g08390	Ser/Thr protein phosphatase family protein, putative, expressed	gene	Ser/Thr protein phosphatase family protein, putative, expressed	chr6	4086965	4091246	+	CDS
3	LOC_Os02g47110	ADP-ribosylation factor, putative, expressed	gene	ADP-ribosylation factor, putative, expressed	chr2	28749301	28752996	+	CDS,three_prime_UTR
3	LOC_Os08g18920	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr8	11273674	11278214	-	three_prime_UTR
3	LOC_Os02g08520	peptidase, T1 family, putative, expressed	gene	peptidase, T1 family, putative, expressed	chr2	4598610	4601379	-	CDS,three_prime_UTR
3	LOC_Os04g53160	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr4	31471584	31477586	+	CDS,downstream
3	LOC_Os05g46710	expressed protein	gene	expressed protein	chr5	26974274	26976576	-	CDS
3	LOC_Os11g37520	BTBT3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed	gene	BTBT3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed	chr11	21684096	21689475	+	CDS
3	LOC_Os08g19114	expressed protein	gene	expressed protein	chr8	11403704	11408813	+	five_prime_UTR
3	LOC_Os01g72940	phosphatidylserine decarboxylase, putative, expressed	gene	phosphatidylserine decarboxylase, putative, expressed	chr1	42302410	42310133	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g17610	OsTOP6A3 - Topoisomerase 6 subunit A homolog 3, expressed	gene	OsTOP6A3 - Topoisomerase 6 subunit A homolog 3, expressed	chr3	9796288	9798851	+	three_prime_UTR,downstream
3	LOC_Os10g41030	agenet domain containing protein, putative, expressed	gene	agenet domain containing protein, putative, expressed	chr10	21952642	21964727	-	CDS
3	LOC_Os03g54860	60S ribosomal protein L13a-2, putative, expressed	gene	60S ribosomal protein L13a-2, putative, expressed	chr3	31173475	31183715	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g40650	metalloprotease ATP23, putative, expressed	gene	metalloprotease ATP23, putative, expressed	chr4	23944368	23948161	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g57820	AT hook motif domain containing protein, expressed	gene	AT hook motif domain containing protein, expressed	chr2	35409302	35413615	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g40990	expressed protein	gene	expressed protein	chr1	23188318	23212677	+	CDS
3	LOC_Os01g52760	expressed protein	gene	expressed protein	chr1	30350785	30357213	+	three_prime_UTR,downstream
3	LOC_Os08g28860	hydrolase, NUDIX family, domain containing protein, expressed	gene	hydrolase, NUDIX family, domain containing protein, expressed	chr8	17640790	17644064	+	CDS,three_prime_UTR
3	LOC_Os05g04190	growth regulator related protein, putative, expressed	gene	growth regulator related protein, putative, expressed	chr5	1889818	1895893	-	CDS,three_prime_UTR
3	LOC_Os06g45690	symbiosis-related disease resistance protein, putative, expressed	gene	symbiosis-related disease resistance protein, putative, expressed	chr6	27665207	27669509	+	CDS
3	LOC_Os01g66730	exosome complex exonuclease RRP40, putative, expressed	gene	exosome complex exonuclease RRP40, putative, expressed	chr1	38754015	38758470	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g17650	tocopherol cyclase, chloroplast precursor, putative, expressed	gene	tocopherol cyclase, chloroplast precursor, putative, expressed	chr2	10155841	10164745	-	CDS,three_prime_UTR
3	LOC_Os07g08440	BHLH transcription factor, putative, expressed	gene	BHLH transcription factor, putative, expressed	chr7	4337515	4341220	+	three_prime_UTR,downstream
3	LOC_Os02g17330	aminotransferase domain containing protein, putative, expressed	gene	aminotransferase domain containing protein, putative, expressed	chr2	9950652	9954958	-	CDS
3	LOC_Os05g19970	ZOS5-06 - C2H2 zinc finger protein, expressed	gene	ZOS5-06 - C2H2 zinc finger protein, expressed	chr5	11660486	11666311	+	CDS,three_prime_UTR
3	LOC_Os10g01550	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr10	359616	365843	-	CDS,three_prime_UTR
3	LOC_Os01g65230	AGC_AGC_other_PDK1_Pk61C.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed	gene	AGC_AGC_other_PDK1_Pk61C.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed	chr1	37852361	37856480	-	CDS,three_prime_UTR
3	LOC_Os03g03390	G-patch domain containing protein, expressed	gene	G-patch domain containing protein, expressed	chr3	1443994	1447725	+	CDS,three_prime_UTR
3	LOC_Os01g67500	armadillo/beta-catenin repeat family protein, putative, expressed	gene	armadillo/beta-catenin repeat family protein, putative, expressed	chr1	39221225	39225530	-	CDS,three_prime_UTR
3	LOC_Os10g40580	expressed protein	gene	expressed protein	chr10	21659590	21665486	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g05380	ATPase BadF/BadG/BcrA/BcrD type, putative, expressed	gene	ATPase BadF/BadG/BcrA/BcrD type, putative, expressed	chr7	2464580	2467072	+	five_prime_UTR,CDS,promoter
3	LOC_Os03g17660	expressed protein	gene	expressed protein	chr3	9821652	9825915	+	CDS,three_prime_UTR
3	LOC_Os11g29350	ELMO/CED-12 family protein, putative, expressed	gene	ELMO/CED-12 family protein, putative, expressed	chr11	16562058	16566458	+	CDS,three_prime_UTR
3	LOC_Os05g06814	expressed protein	gene	expressed protein	chr5	3560962	3571357	-	CDS
3	LOC_Os07g42700	paramyosin, putative, expressed	gene	paramyosin, putative, expressed	chr7	25562432	25566849	+	CDS
3	LOC_Os11g02159	expressed protein	gene	expressed protein	chr11	594327	599872	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os12g01220	expressed protein	gene	expressed protein	chr12	126749	132489	-	CDS
3	LOC_Os09g39310	expressed protein	gene	expressed protein	chr9	22594006	22597000	-	CDS,three_prime_UTR
3	LOC_Os10g25660	OsFBX385 - F-box domain containing protein, expressed	gene	OsFBX385 - F-box domain containing protein, expressed	chr10	13212778	13214442	-	three_prime_UTR,promoter
3	LOC_Os05g35190	powdery mildew resistant protein 5, putative, expressed	gene	powdery mildew resistant protein 5, putative, expressed	chr5	20831542	20835332	+	CDS,three_prime_UTR
3	LOC_Os05g05560	expressed protein	gene	expressed protein	chr5	2763231	2764946	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g46340	pleckstrin homology domain-containing protein, putative, expressed	gene	pleckstrin homology domain-containing protein, putative, expressed	chr3	26204588	26209741	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g35050	ARID/BRIGHT DNA-binding domain containing protein, expressed	gene	ARID/BRIGHT DNA-binding domain containing protein, expressed	chr8	22079859	22091044	-	three_prime_UTR
3	LOC_Os02g34884	SacI homology domain containing protein, expressed	gene	SacI homology domain containing protein, expressed	chr2	20915568	20926938	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g37680	expressed protein	gene	expressed protein	chr7	22589913	22593648	+	CDS
3	LOC_Os06g17440	microtubule-associated protein, putative, expressed	gene	microtubule-associated protein, putative, expressed	chr6	10119876	10123423	+	CDS,three_prime_UTR
3	LOC_Os03g47790	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr3	27117475	27123747	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g05660	expressed protein	gene	expressed protein	chr1	2697928	2703553	-	CDS
3	LOC_Os07g46590	SNF2 family N-terminal domain containing protein, expressed	gene	SNF2 family N-terminal domain containing protein, expressed	chr7	27824786	27833222	-	CDS,three_prime_UTR
3	LOC_Os11g29340	SAP domain containing protein, expressed	gene	SAP domain containing protein, expressed	chr11	16544222	16550034	+	CDS,three_prime_UTR
3	LOC_Os06g38550	expressed protein	gene	expressed protein	chr6	22835857	22838543	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g51260	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr6	31024939	31028134	-	CDS,three_prime_UTR
3	LOC_Os02g58030	leucine-rich repeat-containing protein 40, putative, expressed	gene	leucine-rich repeat-containing protein 40, putative, expressed	chr2	35520718	35527222	-	CDS
3	LOC_Os07g02300	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr7	752654	762372	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g11220	expressed protein	gene	expressed protein	chr8	6597212	6602411	+	CDS,five_prime_UTR
3	LOC_Os07g40800	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr7	24450624	24454580	+	CDS,promoter,downstream
3	LOC_Os03g16570	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr3	9131732	9135634	+	CDS,three_prime_UTR
3	LOC_Os03g58780	expressed protein	gene	expressed protein	chr3	33467213	33473076	-	CDS
3	LOC_Os06g05800	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr6	2634899	2640380	-	CDS,downstream
3	LOC_Os08g19170	G-patch domain containing protein, expressed	gene	G-patch domain containing protein, expressed	chr8	11462121	11467811	-	CDS,three_prime_UTR
3	LOC_Os01g03060	splicing factor, putative, expressed	gene	splicing factor, putative, expressed	chr1	1167647	1170130	-	three_prime_UTR,promoter,downstream
3	LOC_Os03g63690	BCCIP, putative, expressed	gene	BCCIP, putative, expressed	chr3	35963655	35966203	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g22400	OsFBDUF2 - F-box and DUF domain containing protein, expressed	gene	OsFBDUF2 - F-box and DUF domain containing protein, expressed	chr1	12594906	12596354	-	CDS,promoter
3	LOC_Os03g45410	TATA-binding protein, putative	gene	TATA-binding protein, putative	chr3	25632817	25636328	+	CDS,downstream
3	LOC_Os11g41140	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr11	24181887	24185637	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g05020	PIR, putative, expressed	gene	PIR, putative, expressed	chr3	2431918	2448211	+	CDS,downstream
3	LOC_Os04g44100	expressed protein	gene	expressed protein	chr4	25926512	25928788	+	three_prime_UTR
3	LOC_Os03g10360	SURF1, putative, expressed	gene	SURF1, putative, expressed	chr3	5282453	5285844	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g53500	helicase conserved C-terminal domain containing protein, expressed	gene	helicase conserved C-terminal domain containing protein, expressed	chr3	30672572	30682117	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g09780	hypothetical protein	gene	hypothetical protein	chr10	5306515	5307618	+	CDS
3	LOC_Os02g05700	OsFBO8 - F-box and other domain containing protein, expressed	gene	OsFBO8 - F-box and other domain containing protein, expressed	chr2	2798802	2803829	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g43940	carrier, putative	gene	carrier, putative	chr8	27682081	27682785	+	CDS,promoter,downstream
3	LOC_Os03g52840	serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed	gene	serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed	chr3	30292590	30297288	+	CDS,promoter
3	LOC_Os02g49070	ZAC, putative, expressed	gene	ZAC, putative, expressed	chr2	29991699	29996944	-	CDS,three_prime_UTR
3	LOC_Os03g55050	UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed	gene	UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed	chr3	31295593	31298112	+	five_prime_UTR,promoter
3	LOC_Os09g12230	ubiquitin-conjugating enzyme, putative, expressed	gene	ubiquitin-conjugating enzyme, putative, expressed	chr9	6946839	6950237	+	five_prime_UTR,CDS
3	LOC_Os05g07050	pre-mRNA-processing-splicing factor 8, putative, expressed	gene	pre-mRNA-processing-splicing factor 8, putative, expressed	chr5	3704156	3714490	-	CDS
3	LOC_Os03g10430	hypothetical protein	gene	hypothetical protein	chr3	5309119	5310109	+	CDS,downstream
3	LOC_Os01g08410	early fruit mRNA, putative, expressed	gene	early fruit mRNA, putative, expressed	chr1	4122420	4125379	+	three_prime_UTR,promoter,downstream
3	LOC_Os05g33390	cation-transporting ATPase, putative, expressed	gene	cation-transporting ATPase, putative, expressed	chr5	19546956	19562189	-	CDS,promoter
3	LOC_Os03g58180	basic proline-rich protein precursor, putative	gene	basic proline-rich protein precursor, putative	chr3	33130446	33130889	-	CDS,downstream
3	LOC_Os02g52640	xyloglucan fucosyltransferase, putative, expressed	gene	xyloglucan fucosyltransferase, putative, expressed	chr2	32191175	32193619	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g20050	NBS type disease resistance protein, putative	gene	NBS type disease resistance protein, putative	chr6	11497993	11502824	+	CDS,downstream
3	LOC_Os01g18210	peptidyl-prolyl cis-trans isomerase, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, putative, expressed	chr1	10192619	10195751	+	CDS,three_prime_UTR
3	LOC_Os11g43620	LSM domain containing protein, expressed	gene	LSM domain containing protein, expressed	chr11	25841490	25843568	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g14980	lissencephaly type-1-like homology motif, putative, expressed	gene	lissencephaly type-1-like homology motif, putative, expressed	chr3	8164764	8173843	-	CDS,three_prime_UTR
3	LOC_Os11g16280	F-box domain containing protein, expressed	gene	F-box domain containing protein, expressed	chr11	8960019	8964642	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os01g41600	Sad1 / UNC-like C-terminal domain containing protein, putative, expressed	gene	Sad1 / UNC-like C-terminal domain containing protein, putative, expressed	chr1	23550926	23553208	+	three_prime_UTR,downstream
3	LOC_Os04g56939	expressed protein	gene	expressed protein	chr4	33762191	33764657	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g08050	expressed protein	gene	expressed protein	chr7	4076505	4084523	+	three_prime_UTR,downstream
3	LOC_Os06g40600	elongation factor, putative, expressed	gene	elongation factor, putative, expressed	chr6	24205618	24211572	-	CDS,three_prime_UTR
3	LOC_Os11g45809	expressed protein	gene	expressed protein	chr11	27245838	27249486	+	three_prime_UTR
3	LOC_Os07g14850	CESA6 - cellulose synthase, expressed	gene	CESA6 - cellulose synthase, expressed	chr7	8495194	8500911	+	CDS
3	LOC_Os04g45970	glutamate dehydrogenase protein, putative, expressed	gene	glutamate dehydrogenase protein, putative, expressed	chr4	27048230	27052974	+	CDS,three_prime_UTR
3	LOC_Os07g44610	pyrrolidone-carboxylate peptidase, putative, expressed	gene	pyrrolidone-carboxylate peptidase, putative, expressed	chr7	26617655	26621034	-	CDS
3	LOC_Os12g36270	expressed protein	gene	expressed protein	chr12	22180427	22185525	+	five_prime_UTR,CDS
3	LOC_Os08g38240	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr8	24235552	24239398	-	three_prime_UTR
3	LOC_Os04g38900	prohibitin, putative, expressed	gene	prohibitin, putative, expressed	chr4	22930974	22932817	-	three_prime_UTR,promoter
3	LOC_Os09g14670	phosphoenolpyruvate carboxylase, putative, expressed	gene	phosphoenolpyruvate carboxylase, putative, expressed	chr9	8691190	8696572	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g06920	resistance protein SlVe1 precursor, putative, expressed	gene	resistance protein SlVe1 precursor, putative, expressed	chr1	3281976	3285357	+	CDS
3	LOC_Os12g36630	universal stress protein domain containing protein, putative, expressed	gene	universal stress protein domain containing protein, putative, expressed	chr12	22394625	22395537	-	CDS,downstream
3	LOC_Os07g02960	expressed protein	gene	expressed protein	chr7	1100847	1104391	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os01g66330	ATP-dependent Clp protease ATP-binding subunit clpX, putative, expressed	gene	ATP-dependent Clp protease ATP-binding subunit clpX, putative, expressed	chr1	38519589	38525366	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g49180	plant-specific domain TIGR01589 family protein, putative, expressed	gene	plant-specific domain TIGR01589 family protein, putative, expressed	chr6	29797152	29800549	-	CDS,three_prime_UTR,downstream
3	LOC_Os06g48960	AIG2-like family domain containing protein, expressed	gene	AIG2-like family domain containing protein, expressed	chr6	29664221	29666374	-	CDS,promoter
3	LOC_Os02g54710	expressed protein	gene	expressed protein	chr2	33490106	33492293	-	three_prime_UTR,promoter
3	LOC_Os01g08970	SSRP1-like FACT complex subunit, putative, expressed	gene	SSRP1-like FACT complex subunit, putative, expressed	chr1	4496719	4503407	+	CDS
3	LOC_Os01g11250	potassium channel KAT1, putative, expressed	gene	potassium channel KAT1, putative, expressed	chr1	6016742	6021156	-	five_prime_UTR,CDS,downstream
3	LOC_Os08g32570	expressed protein	gene	expressed protein	chr8	20168481	20171959	+	three_prime_UTR
3	LOC_Os12g07160	plant protein of unknown function DUF869 domain containing protein, expressed	gene	plant protein of unknown function DUF869 domain containing protein, expressed	chr12	3513865	3520715	-	CDS
3	LOC_Os01g53060	peroxisomal membrane protein, putative, expressed	gene	peroxisomal membrane protein, putative, expressed	chr1	30487130	30489457	+	three_prime_UTR,downstream
3	LOC_Os07g48750	alpha-N-arabinofuranosidase, putative, expressed	gene	alpha-N-arabinofuranosidase, putative, expressed	chr7	29181955	29187678	+	CDS
3	LOC_Os02g38440	oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed	gene	oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed	chr2	23235758	23238771	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g43710	CSLA7 - cellulose synthase-like family A; mannan synthase, expressed	gene	CSLA7 - cellulose synthase-like family A; mannan synthase, expressed	chr7	26157356	26162538	+	CDS,downstream
3	LOC_Os07g01320	expressed protein	gene	expressed protein	chr7	194763	198857	-	CDS,three_prime_UTR
3	LOC_Os11g35240	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr11	20194159	20195777	-	CDS,promoter
3	LOC_Os05g03140	tetraspanin family protein, putative, expressed	gene	tetraspanin family protein, putative, expressed	chr5	1254551	1258802	+	CDS,three_prime_UTR
3	LOC_Os01g65094	expressed protein	gene	expressed protein	chr1	37781884	37784369	-	three_prime_UTR,promoter
3	LOC_Os06g49440	serine esterase, putative, expressed	gene	serine esterase, putative, expressed	chr6	29954440	29959779	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g37890	expressed protein	gene	expressed protein	chr12	23250365	23259189	+	CDS,promoter
3	LOC_Os09g31300	helix-loop-helix DNA-binding domain containing protein, expressed	gene	helix-loop-helix DNA-binding domain containing protein, expressed	chr9	18813008	18816017	+	three_prime_UTR
3	LOC_Os12g43664	FGGY family of carbohydrate kinases, putative, expressed	gene	FGGY family of carbohydrate kinases, putative, expressed	chr12	27094405	27098358	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g33590	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr5	19679775	19682335	-	CDS
3	LOC_Os11g04160	dehydrogenase-phosphopantetheinyltransferase, putative	gene	dehydrogenase-phosphopantetheinyltransferase, putative	chr11	1688435	1690341	+	CDS,downstream
3	LOC_Os03g49150	yippee zinc-binding protein, putative, expressed	gene	yippee zinc-binding protein, putative, expressed	chr3	27990869	27994434	+	CDS,three_prime_UTR
3	LOC_Os12g38420	hypothetical protein	gene	hypothetical protein	chr12	23550936	23551541	-	CDS,downstream
3	LOC_Os01g43580	kinesin motor domain containing protein, putative, expressed	gene	kinesin motor domain containing protein, putative, expressed	chr1	24957467	24961806	+	CDS
3	LOC_Os04g39560	expressed protein	gene	expressed protein	chr4	23368559	23375551	-	three_prime_UTR,promoter
3	LOC_Os07g34950	uncharacterized membrane protein, putative, expressed	gene	uncharacterized membrane protein, putative, expressed	chr7	20935098	20940661	+	CDS,three_prime_UTR
3	LOC_Os03g18720	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr3	10477051	10481542	-	CDS,three_prime_UTR
3	LOC_Os05g49800	ketol-acid reductoisomerase, chloroplast precursor, putative, expressed	gene	ketol-acid reductoisomerase, chloroplast precursor, putative, expressed	chr5	28516549	28519970	-	CDS,three_prime_UTR
3	LOC_Os05g41210	OsCam2 - Calmodulin, expressed	gene	OsCam2 - Calmodulin, expressed	chr5	24069860	24072318	-	CDS,three_prime_UTR
3	LOC_Os05g35710	coiled-coil domain-containing protein 47 precursor, putative, expressed	gene	coiled-coil domain-containing protein 47 precursor, putative, expressed	chr5	21139306	21142456	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g43670	TKL_IRAK_CR4L.1 - The CR4L subfamily has homology with Crinkly4, expressed	gene	TKL_IRAK_CR4L.1 - The CR4L subfamily has homology with Crinkly4, expressed	chr3	24413962	24418152	+	CDS
3	LOC_Os07g01250	tobamovirus multiplication protein, putative, expressed	gene	tobamovirus multiplication protein, putative, expressed	chr7	145967	149184	-	CDS,three_prime_UTR
3	LOC_Os04g55920	zinc-finger protein, putative, expressed	gene	zinc-finger protein, putative, expressed	chr4	33121351	33125122	+	CDS,downstream
3	LOC_Os02g52270	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr2	31995777	31997987	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g56950	expressed protein	gene	expressed protein	chr2	34899565	34904953	-	three_prime_UTR,promoter,downstream
3	LOC_Os07g07620	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr7	3816982	3819730	-	CDS,three_prime_UTR
3	LOC_Os10g22590	POEI24 - Pollen Ole e I allergen and extensin family protein precursor, expressed	gene	POEI24 - Pollen Ole e I allergen and extensin family protein precursor, expressed	chr10	11652234	11655241	+	three_prime_UTR,downstream
3	LOC_Os01g71230	nascent polypeptide-associated complex subunit alpha-like protein 3, putative, expressed	gene	nascent polypeptide-associated complex subunit alpha-like protein 3, putative, expressed	chr1	41213268	41216026	+	three_prime_UTR,downstream
3	LOC_Os10g05220	queuine tRNA-ribosyltransferase, putative, expressed	gene	queuine tRNA-ribosyltransferase, putative, expressed	chr10	2557819	2563251	+	CDS,three_prime_UTR,promoter
3	LOC_Os08g03620	tetratricopeptide repeat domain containing protein	gene	tetratricopeptide repeat domain containing protein	chr8	1709029	1714016	-	CDS
3	LOC_Os05g45930	IQ calmodulin-binding motif family protein, putative, expressed	gene	IQ calmodulin-binding motif family protein, putative, expressed	chr5	26553899	26558284	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g12870	eukaryotic translation initiation factor 3 subunit E-interacting protein, putative, expressed	gene	eukaryotic translation initiation factor 3 subunit E-interacting protein, putative, expressed	chr1	7124360	7127912	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g37050	expressed protein	gene	expressed protein	chr11	21405934	21410956	+	CDS,three_prime_UTR
3	LOC_Os06g13950	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr6	7767091	7768905	-	CDS,promoter
3	LOC_Os07g30200	tRNA synthetases class II domain containing protein, expressed	gene	tRNA synthetases class II domain containing protein, expressed	chr7	17837532	17844002	+	CDS,three_prime_UTR
3	LOC_Os03g01940	expressed protein	gene	expressed protein	chr3	573189	579702	-	CDS,three_prime_UTR
3	LOC_Os05g39110	selT-like protein precursor, putative, expressed	gene	selT-like protein precursor, putative, expressed	chr5	22870089	22873279	+	CDS,three_prime_UTR
3	LOC_Os11g23880	expressed protein	gene	expressed protein	chr11	13057647	13062587	+	CDS,three_prime_UTR
3	LOC_Os12g04020	hydroxymethylglutaryl-CoA lyase, putative, expressed	gene	hydroxymethylglutaryl-CoA lyase, putative, expressed	chr12	1670493	1674232	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g43040	expressed protein	gene	expressed protein	chr2	25906943	25911158	-	CDS,three_prime_UTR
3	LOC_Os03g50740	retrotransposon protein, putative, SINE subclass, expressed	gene	retrotransposon protein, putative, SINE subclass, expressed	chr3	28956889	28968333	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g27470	importin-7, putative, expressed	gene	importin-7, putative, expressed	chr2	16202461	16210607	+	CDS
3	LOC_Os05g11090	thioredoxin, putative, expressed	gene	thioredoxin, putative, expressed	chr5	6233758	6237852	-	CDS,three_prime_UTR
3	LOC_Os04g20810	receptor protein kinase, putative, expressed	gene	receptor protein kinase, putative, expressed	chr4	11671679	11675856	-	CDS,three_prime_UTR
3	LOC_Os05g16670	SHR5-receptor-like kinase, putative, expressed	gene	SHR5-receptor-like kinase, putative, expressed	chr5	9461569	9474035	+	CDS,three_prime_UTR
3	LOC_Os07g40790	COBW domain containing protein, putative, expressed	gene	COBW domain containing protein, putative, expressed	chr7	24445295	24450356	+	CDS,three_prime_UTR
3	LOC_Os11g06680	expressed protein	gene	expressed protein	chr11	3246004	3250412	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g61540	lipase class 3 family protein, putative, expressed	gene	lipase class 3 family protein, putative, expressed	chr3	34889202	34893800	-	CDS
3	LOC_Os08g09740	OsFBX274 - F-box domain containing protein, expressed	gene	OsFBX274 - F-box domain containing protein, expressed	chr8	5627899	5631269	+	CDS,three_prime_UTR
3	LOC_Os02g22084	expressed protein	gene	expressed protein	chr2	13137865	13141339	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os04g41100	cyclin-dependent kinase G-2, putative, expressed	gene	cyclin-dependent kinase G-2, putative, expressed	chr4	24186653	24192932	+	three_prime_UTR
3	LOC_Os09g18320	bystin, putative, expressed	gene	bystin, putative, expressed	chr9	11235536	11239953	-	CDS,three_prime_UTR
3	LOC_Os05g05840	tRNA synthetase class II core domain containing protein, expressed	gene	tRNA synthetase class II core domain containing protein, expressed	chr5	2928098	2931958	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g12460	Leucine Rich Repeat family protein, expressed	gene	Leucine Rich Repeat family protein, expressed	chr4	6884305	6889427	-	CDS
3	LOC_Os03g36750	cbbY, putative, expressed	gene	cbbY, putative, expressed	chr3	20378127	20385586	+	CDS
3	LOC_Os01g43700	cytochrome P450 72A1, putative, expressed	gene	cytochrome P450 72A1, putative, expressed	chr1	25039170	25043006	+	CDS
3	LOC_Os12g09610	expressed protein	gene	expressed protein	chr12	5060125	5067398	+	CDS,downstream
3	LOC_Os01g47840	S-locus-like receptor protein kinase, putative, expressed	gene	S-locus-like receptor protein kinase, putative, expressed	chr1	27385527	27387872	+	CDS,promoter
3	LOC_Os06g06530	proline-rich cell wall protein-like, putative, expressed	gene	proline-rich cell wall protein-like, putative, expressed	chr6	3059005	3062608	-	CDS,three_prime_UTR
3	LOC_Os11g43890	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr11	26030032	26032725	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g10290	autophagy-related protein 3, putative, expressed	gene	autophagy-related protein 3, putative, expressed	chr1	5412599	5415935	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g52230	coronatine-insensitive protein 1, putative, expressed	gene	coronatine-insensitive protein 1, putative, expressed	chr2	31980085	31983554	+	CDS,three_prime_UTR
3	LOC_Os05g42210	serine/threonine-protein kinase receptor precursor, putative, expressed	gene	serine/threonine-protein kinase receptor precursor, putative, expressed	chr5	24614194	24620048	+	CDS
3	LOC_Os04g51360	oxidoreductase, 2OG-Fe oxygenase family protein, putative	gene	oxidoreductase, 2OG-Fe oxygenase family protein, putative	chr4	30228661	30230565	-	CDS,promoter,downstream
3	LOC_Os06g46240	BTB/POZ domain containing protein, putative, expressed	gene	BTB/POZ domain containing protein, putative, expressed	chr6	28006287	28016492	+	CDS
3	LOC_Os07g41900	expressed protein	gene	expressed protein	chr7	25099406	25103606	+	CDS,three_prime_UTR
3	LOC_Os02g43710	enoyl-CoA hydratase/isomerase family protein, putative, expressed	gene	enoyl-CoA hydratase/isomerase family protein, putative, expressed	chr2	26376063	26379814	+	CDS
3	LOC_Os09g07500	expressed protein	gene	expressed protein	chr9	3750007	3753991	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g38210	mitochondrial glycoprotein, putative, expressed	gene	mitochondrial glycoprotein, putative, expressed	chr5	22341731	22343668	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g03020	L11 domain containing ribosomal protein, putative, expressed	gene	L11 domain containing ribosomal protein, putative, expressed	chr3	1231212	1233474	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g05880	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr5	2952630	2956060	+	five_prime_UTR,CDS
3	LOC_Os02g27850	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr2	16481976	16487633	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g23150	indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed	gene	indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed	chr8	13951738	13955701	+	CDS
3	LOC_Os01g04900	peptidase M50 family protein, putative, expressed	gene	peptidase M50 family protein, putative, expressed	chr1	2264477	2270051	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g55480	BRCA1-associated protein, putative, expressed	gene	BRCA1-associated protein, putative, expressed	chr4	32809185	32814668	-	CDS
3	LOC_Os04g27250	expressed protein	gene	expressed protein	chr4	15927483	15930445	+	CDS,five_prime_UTR
3	LOC_Os10g20630	vacuolar-sorting receptor precursor, putative, expressed	gene	vacuolar-sorting receptor precursor, putative, expressed	chr10	10339965	10347332	-	CDS,three_prime_UTR
3	LOC_Os05g27940	40S ribosomal protein S7, putative, expressed	gene	40S ribosomal protein S7, putative, expressed	chr5	16245171	16248617	-	CDS,three_prime_UTR
3	LOC_Os07g20420	tetratricopeptide-like helical, putative, expressed	gene	tetratricopeptide-like helical, putative, expressed	chr7	11787925	11791500	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g14010	PHD finger protein, putative, expressed	gene	PHD finger protein, putative, expressed	chr11	7772391	7779939	-	CDS,three_prime_UTR
3	LOC_Os05g38830	HECT-domain domain containing protein, expressed	gene	HECT-domain domain containing protein, expressed	chr5	22713478	22716547	-	CDS,three_prime_UTR
3	LOC_Os09g36110	OsSub59 - Putative Subtilisin homologue, expressed	gene	OsSub59 - Putative Subtilisin homologue, expressed	chr9	20793975	20797285	+	CDS,downstream
3	LOC_Os08g18079	expressed protein	gene	expressed protein	chr8	11073059	11077784	+	five_prime_UTR
3	LOC_Os08g14640	syntaxin 6, N-terminal domain containing protein, expressed	gene	syntaxin 6, N-terminal domain containing protein, expressed	chr8	8801822	8805886	-	CDS,three_prime_UTR
3	LOC_Os12g38630	asparagine synthase family protein, expressed	gene	asparagine synthase family protein, expressed	chr12	23696353	23701349	-	CDS
3	LOC_Os03g49500	ethylene receptor, putative, expressed	gene	ethylene receptor, putative, expressed	chr3	28162861	28167304	-	CDS
3	LOC_Os01g53600	farnesyltransferase subunit beta, putative, expressed	gene	farnesyltransferase subunit beta, putative, expressed	chr1	30774058	30778229	-	CDS
3	LOC_Os05g33520	expressed protein	gene	expressed protein	chr5	19628827	19631772	-	CDS,three_prime_UTR
3	LOC_Os03g02830	cell cycle control protein, putative, expressed	gene	cell cycle control protein, putative, expressed	chr3	1101445	1105644	-	three_prime_UTR,promoter
3	LOC_Os03g63750	HSF-type DNA-binding domain containing protein, expressed	gene	HSF-type DNA-binding domain containing protein, expressed	chr3	35981880	35985504	+	three_prime_UTR,downstream
3	LOC_Os06g47130	C2 domain containing protein, expressed	gene	C2 domain containing protein, expressed	chr6	28557294	28563764	+	CDS
3	LOC_Os11g10400	OsFBX419 - F-box domain containing protein, expressed	gene	OsFBX419 - F-box domain containing protein, expressed	chr11	5641353	5644168	-	three_prime_UTR
3	LOC_Os01g51040	transmembrane protein 16K, putative, expressed	gene	transmembrane protein 16K, putative, expressed	chr1	29317147	29321524	-	CDS
3	LOC_Os10g36550	CRP3 - Cysteine-rich family protein precursor, expressed	gene	CRP3 - Cysteine-rich family protein precursor, expressed	chr10	19483609	19487021	+	three_prime_UTR
3	LOC_Os07g05370	TKL_IRAK_CrRLK1L-1.15 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed	gene	TKL_IRAK_CrRLK1L-1.15 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed	chr7	2457241	2461078	-	three_prime_UTR,promoter
3	LOC_Os01g55780	glycerophosphoryl diester phosphodiesterase family protein, putative, expressed	gene	glycerophosphoryl diester phosphodiesterase family protein, putative, expressed	chr1	32129542	32135960	+	CDS
3	LOC_Os02g04660	arginine N-methyltransferase 5, putative, expressed	gene	arginine N-methyltransferase 5, putative, expressed	chr2	2087063	2093051	-	CDS
3	LOC_Os12g37419	cytochrome c oxidase polypeptide Vc, putative, expressed	gene	cytochrome c oxidase polypeptide Vc, putative, expressed	chr12	22935846	22938776	-	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os05g05910	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr5	2964502	2966664	+	CDS
3	LOC_Os02g51860	dehydration response related protein, putative, expressed	gene	dehydration response related protein, putative, expressed	chr2	31757146	31762913	-	CDS,three_prime_UTR
3	LOC_Os09g17730	proton pump interactor, putative, expressed	gene	proton pump interactor, putative, expressed	chr9	10833935	10843000	+	CDS
3	LOC_Os06g43270	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr6	26002184	26006063	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g15020	lissencephaly type-1-like homology motif, putative, expressed	gene	lissencephaly type-1-like homology motif, putative, expressed	chr1	8419923	8429280	-	CDS,three_prime_UTR
3	LOC_Os09g38777	MOSC domain-containing protein, mitochondrial precursor, putative, expressed	gene	MOSC domain-containing protein, mitochondrial precursor, putative, expressed	chr9	22281008	22283731	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g52630	leucine-rich repeat-containing protein kinase family protein, putative, expressed	gene	leucine-rich repeat-containing protein kinase family protein, putative, expressed	chr4	31123643	31131193	-	CDS
3	LOC_Os01g37560	chaperone protein dnaJ 49, putative, expressed	gene	chaperone protein dnaJ 49, putative, expressed	chr1	20986715	20991489	+	three_prime_UTR
3	LOC_Os01g33050	ribosomal protein L24, putative, expressed	gene	ribosomal protein L24, putative, expressed	chr1	18157595	18162503	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g27060	PPR repeat domain containing protein, putative	gene	PPR repeat domain containing protein, putative	chr12	15839771	15843124	+	CDS,downstream
3	LOC_Os11g04240	TFIIE-alpha 2, putative, expressed	gene	TFIIE-alpha 2, putative, expressed	chr11	1743100	1747825	+	CDS,three_prime_UTR
3	LOC_Os01g12840	expressed protein	gene	expressed protein	chr1	7103273	7108141	-	CDS
3	LOC_Os09g15284	expressed protein	gene	expressed protein	chr9	9318982	9321012	-	three_prime_UTR,promoter
3	LOC_Os08g39970	ENT domain containing protein, expressed	gene	ENT domain containing protein, expressed	chr8	25318818	25322923	+	CDS,downstream
3	LOC_Os05g25974	expressed protein	gene	expressed protein	chr5	15034686	15037669	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os04g31240	hydrolase, alpha/beta fold family protein, putative, expressed	gene	hydrolase, alpha/beta fold family protein, putative, expressed	chr4	18518693	18522794	+	CDS
3	LOC_Os07g39070	5-formyltetrahydrofolate cyclo-ligase, putative, expressed	gene	5-formyltetrahydrofolate cyclo-ligase, putative, expressed	chr7	23418025	23421461	+	CDS
3	LOC_Os09g07764	hypothetical protein	gene	hypothetical protein	chr9	3928804	3929561	+	five_prime_UTR,CDS,promoter
3	LOC_Os12g43830	NUC189 domain containing protein, expressed	gene	NUC189 domain containing protein, expressed	chr12	27176739	27179569	-	CDS,three_prime_UTR
3	LOC_Os03g56900	reticulon domain containing protein, putative, expressed	gene	reticulon domain containing protein, putative, expressed	chr3	32394810	32397624	-	three_prime_UTR,promoter
3	LOC_Os05g48370	expressed protein	gene	expressed protein	chr5	27666839	27668767	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g39840	expressed protein	gene	expressed protein	chr7	23887296	23890645	-	CDS,three_prime_UTR
3	LOC_Os02g12850	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr2	6784169	6788332	-	CDS,three_prime_UTR
3	LOC_Os08g25130	enhancer of polycomb, putative, expressed	gene	enhancer of polycomb, putative, expressed	chr8	15253314	15264729	-	CDS,three_prime_UTR
3	LOC_Os10g42439	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr10	22789814	22804428	-	CDS
3	LOC_Os04g56520	alpha-1,4-glucan-protein synthase, putative, expressed	gene	alpha-1,4-glucan-protein synthase, putative, expressed	chr4	33519766	33522228	+	three_prime_UTR,downstream
3	LOC_Os10g35190	ZOS10-06 - C2H2 zinc finger protein, expressed	gene	ZOS10-06 - C2H2 zinc finger protein, expressed	chr10	18723094	18727119	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g44840	choline transporter-related, putative, expressed	gene	choline transporter-related, putative, expressed	chr3	25295741	25299961	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g08740	expressed protein	gene	expressed protein	chr6	4369967	4375384	-	CDS,promoter
3	LOC_Os04g51900	expressed protein	gene	expressed protein	chr4	30605950	30613049	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g02460	outer membrane protein, OMP85 family, putative, expressed	gene	outer membrane protein, OMP85 family, putative, expressed	chr11	736421	741793	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g55340	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr3	31473033	31476173	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g11740	plastidic ATP/ADP-transporter, putative, expressed	gene	plastidic ATP/ADP-transporter, putative, expressed	chr2	6057100	6060286	+	CDS,three_prime_UTR
3	LOC_Os11g35410	expressed protein	gene	expressed protein	chr11	20282506	20285821	-	CDS,promoter
3	LOC_Os02g39880	expressed protein	gene	expressed protein	chr2	24089985	24091843	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g34870	expressed protein	gene	expressed protein	chr1	19251623	19256359	+	CDS
3	LOC_Os05g31770	tetratricopeptide repeat containing protein, putative, expressed	gene	tetratricopeptide repeat containing protein, putative, expressed	chr5	18442132	18445377	-	CDS
3	LOC_Os01g08450	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr1	4159946	4164165	-	CDS
3	LOC_Os10g35220	KH domain containing protein, putative, expressed	gene	KH domain containing protein, putative, expressed	chr10	18742175	18748246	+	CDS,three_prime_UTR
3	LOC_Os03g53300	expressed protein	gene	expressed protein	chr3	30586354	30588948	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g41360	ARABIDILLO-1, putative, expressed	gene	ARABIDILLO-1, putative, expressed	chr10	22156100	22163731	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g04990	cytoskeletal protein, putative, expressed	gene	cytoskeletal protein, putative, expressed	chr9	2684727	2687382	+	CDS,downstream
3	LOC_Os07g28930	expressed protein	gene	expressed protein	chr7	16965940	16968971	+	CDS
3	LOC_Os03g02110	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr3	673685	680879	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g67550	FAD binding domain containing protein, expressed	gene	FAD binding domain containing protein, expressed	chr1	39261813	39265628	+	CDS,promoter,downstream
3	LOC_Os01g31580	BZIP protein, putative, expressed	gene	BZIP protein, putative, expressed	chr1	17265113	17273794	-	CDS,downstream
3	LOC_Os03g44760	SWI1, putative, expressed	gene	SWI1, putative, expressed	chr3	25232115	25238300	+	CDS
3	LOC_Os03g53950	strictosidine synthase, putative, expressed	gene	strictosidine synthase, putative, expressed	chr3	30920110	30922710	-	three_prime_UTR,promoter
3	LOC_Os02g14800	expressed protein	gene	expressed protein	chr2	8209594	8223355	+	CDS,three_prime_UTR
3	LOC_Os04g52550	PAZ domain-containing protein, putative, expressed	gene	PAZ domain-containing protein, putative, expressed	chr4	31059338	31064566	+	three_prime_UTR,downstream
3	LOC_Os07g22600	spermidine synthase, putative, expressed	gene	spermidine synthase, putative, expressed	chr7	12715463	12721918	-	CDS
3	LOC_Os02g52370	armadillo/beta-catenin repeat family protein, putative, expressed	gene	armadillo/beta-catenin repeat family protein, putative, expressed	chr2	32046697	32050028	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g53214	hydroxyacid oxidase 1, putative, expressed	gene	hydroxyacid oxidase 1, putative, expressed	chr4	31508009	31511540	+	CDS,three_prime_UTR
3	LOC_Os02g32780	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr2	19460445	19463492	-	CDS,three_prime_UTR
3	LOC_Os06g11520	LMBR1 integral membrane protein, putative, expressed	gene	LMBR1 integral membrane protein, putative, expressed	chr6	6101124	6107980	-	CDS
3	LOC_Os07g10850	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr7	5910830	5923367	-	CDS
3	LOC_Os04g45821	expressed protein	gene	expressed protein	chr4	26947904	26950465	+	CDS,three_prime_UTR
3	LOC_Os05g11428	expressed protein	gene	expressed protein	chr5	6468075	6476395	-	CDS
3	LOC_Os11g43950	dnaJ domain containing protein, expressed	gene	dnaJ domain containing protein, expressed	chr11	26071252	26077719	+	CDS,three_prime_UTR
3	LOC_Os03g46400	UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed	gene	UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed	chr3	26235188	26237465	-	five_prime_UTR,CDS,downstream
3	LOC_Os02g37580	fimbrin-like protein 2, putative, expressed	gene	fimbrin-like protein 2, putative, expressed	chr2	22660586	22665610	-	CDS
3	LOC_Os01g31220	expressed protein	gene	expressed protein	chr1	17065889	17069786	-	CDS,three_prime_UTR
3	LOC_Os01g01710	1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor, putative, expressed	gene	1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor, putative, expressed	chr1	373728	379716	-	three_prime_UTR,CDS,promoter
3	LOC_Os07g29320	rRNA-processing protein EBP2, putative, expressed	gene	rRNA-processing protein EBP2, putative, expressed	chr7	17194216	17195995	-	three_prime_UTR,promoter
3	LOC_Os04g37630	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr4	22191917	22194231	+	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os03g43684	KIP1, putative, expressed	gene	KIP1, putative, expressed	chr3	24424802	24433681	-	CDS
3	LOC_Os03g02980	CAMK_CAMK_like_ULKh_APGy.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like_ULKh_APGy.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr3	1210677	1216859	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g41795	zinc finger C3HC4 type family protein, putative, expressed	gene	zinc finger C3HC4 type family protein, putative, expressed	chr5	24410557	24416292	+	CDS,three_prime_UTR
3	LOC_Os09g12560	ferrochelatase-2, chloroplast precursor, putative, expressed	gene	ferrochelatase-2, chloroplast precursor, putative, expressed	chr9	7197633	7203750	+	CDS,downstream
3	LOC_Os04g33480	histone deacetylase, putative, expressed	gene	histone deacetylase, putative, expressed	chr4	20078135	20083870	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g01730	WD-40 repeat family protein, putative, expressed	gene	WD-40 repeat family protein, putative, expressed	chr7	431084	436658	+	CDS,three_prime_UTR,promoter
3	LOC_Os12g42930	hypothetical protein	gene	hypothetical protein	chr12	26641060	26644749	-	CDS
3	LOC_Os04g52370	UTP--glucose-1-phosphate uridylyltransferase, putative, expressed	gene	UTP--glucose-1-phosphate uridylyltransferase, putative, expressed	chr4	30923809	30928362	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g57330	expressed protein	gene	expressed protein	chr4	33942870	33946059	-	CDS,three_prime_UTR
3	LOC_Os01g48680	two pore calcium channel protein 1, putative, expressed	gene	two pore calcium channel protein 1, putative, expressed	chr1	27905564	27919936	-	CDS,three_prime_UTR
3	LOC_Os09g15340	hydrolase, NUDIX family, domain containing protein, expressed	gene	hydrolase, NUDIX family, domain containing protein, expressed	chr9	9378744	9382837	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g32986	heat shock protein, putative, expressed	gene	heat shock protein, putative, expressed	chr12	19893046	19899236	-	CDS,downstream
3	LOC_Os10g39780	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr10	21221362	21225978	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g42030	expressed protein	gene	expressed protein	chr4	24709218	24711363	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g32010	ternary complex factor MIP1, putative, expressed	gene	ternary complex factor MIP1, putative, expressed	chr9	19103531	19108509	+	CDS
3	LOC_Os02g38690	protein phosphatase 2C containing protein	gene	protein phosphatase 2C containing protein	chr2	23379495	23385971	+	CDS,promoter,downstream
3	LOC_Os12g41920	single myb histone, putative, expressed	gene	single myb histone, putative, expressed	chr12	25950892	25954381	-	CDS,three_prime_UTR
3	LOC_Os02g39300	RNA-binding protein Luc7-like, putative, expressed	gene	RNA-binding protein Luc7-like, putative, expressed	chr2	23723380	23728528	+	CDS,three_prime_UTR
3	LOC_Os06g47550	cadmium/zinc-transporting ATPase, putative, expressed	gene	cadmium/zinc-transporting ATPase, putative, expressed	chr6	28788017	28796547	-	three_prime_UTR,CDS
3	LOC_Os02g04810	auxin response factor 5, putative, expressed	gene	auxin response factor 5, putative, expressed	chr2	2207419	2214632	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g33310	cyclin-dependent kinase inhibitor, putative, expressed	gene	cyclin-dependent kinase inhibitor, putative, expressed	chr10	17428412	17431977	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g19680	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr9	11777331	11784465	+	CDS
3	LOC_Os03g51140	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr3	29253570	29265334	+	CDS
3	LOC_Os02g04240	wee1-like protein kinase, putative, expressed	gene	wee1-like protein kinase, putative, expressed	chr2	1859994	1864612	-	CDS
3	LOC_Os03g12804	expressed protein	gene	expressed protein	chr3	6862023	6870196	-	five_prime_UTR,CDS,downstream
3	LOC_Os01g12890	expressed protein	gene	expressed protein	chr1	7156780	7163385	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g04590	OsFBX358 - F-box domain containing protein, expressed	gene	OsFBX358 - F-box domain containing protein, expressed	chr10	2184203	2187524	+	three_prime_UTR
3	LOC_Os10g35010	ATTIC110/TIC110, putative, expressed	gene	ATTIC110/TIC110, putative, expressed	chr10	18598535	18607372	-	CDS,promoter
3	LOC_Os06g17870	nitrate-induced NOI protein, putative	gene	nitrate-induced NOI protein, putative	chr6	10371361	10373625	+	CDS,downstream
3	LOC_Os06g19370	cadmium tolerance factor, putative, expressed	gene	cadmium tolerance factor, putative, expressed	chr6	11021312	11026885	+	three_prime_UTR,downstream
3	LOC_Os12g03360	EMB1379, putative, expressed	gene	EMB1379, putative, expressed	chr12	1304139	1306108	+	CDS,three_prime_UTR
3	LOC_Os05g43560	AGAP007115-PA, putative, expressed	gene	AGAP007115-PA, putative, expressed	chr5	25258716	25268285	-	CDS,three_prime_UTR,downstream
3	LOC_Os07g48360	helicase conserved C-terminal domain containing protein, expressed	gene	helicase conserved C-terminal domain containing protein, expressed	chr7	28900456	28907706	+	CDS,promoter
3	LOC_Os03g56320	expressed protein	gene	expressed protein	chr3	32099915	32103284	+	three_prime_UTR
3	LOC_Os06g43190	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr6	25962876	25966414	-	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g41090	CAMK_CAMK_like_CG18020d.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like_CG18020d.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr5	24008595	24012509	-	CDS,three_prime_UTR,downstream
3	LOC_Os08g44390	EF hand family protein, putative, expressed	gene	EF hand family protein, putative, expressed	chr8	27928735	27931662	-	three_prime_UTR,CDS,promoter
3	LOC_Os06g46940	Os6bglu25 - beta-glucosidase homologue, similar to Os3bglu6, expressed	gene	Os6bglu25 - beta-glucosidase homologue, similar to Os3bglu6, expressed	chr6	28474575	28480090	+	CDS,three_prime_UTR,promoter
3	LOC_Os04g43770	expressed protein	gene	expressed protein	chr4	25726993	25729961	-	CDS,promoter
3	LOC_Os02g21250	clathrin adaptor complex small chain domain containing protein, expressed	gene	clathrin adaptor complex small chain domain containing protein, expressed	chr2	12609019	12613257	+	CDS,downstream
3	LOC_Os11g06220	expressed protein	gene	expressed protein	chr11	2967019	2970351	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os07g44320	expressed protein	gene	expressed protein	chr7	26473152	26477334	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g54120	CCR4-NOT transcription factor, putative, expressed	gene	CCR4-NOT transcription factor, putative, expressed	chr2	33153352	33163156	-	CDS,downstream
3	LOC_Os07g01930	2Fe-2S iron-sulfur cluster binding domain containing protein, expressed	gene	2Fe-2S iron-sulfur cluster binding domain containing protein, expressed	chr7	562346	565055	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g26820	exo70 exocyst complex subunit, putative, expressed	gene	exo70 exocyst complex subunit, putative, expressed	chr9	16293641	16296228	+	three_prime_UTR,downstream
3	LOC_Os11g29690	oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed	gene	oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed	chr11	16742015	16744015	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g14530	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr7	8280894	8285289	-	CDS,three_prime_UTR
3	LOC_Os11g09329	VHS and GAT domain containing protein, expressed	gene	VHS and GAT domain containing protein, expressed	chr11	4989236	5002099	-	CDS,three_prime_UTR
3	LOC_Os10g35560	expressed protein	gene	expressed protein	chr10	18944376	18953973	+	CDS,three_prime_UTR
3	LOC_Os01g64760	Yip1 domain containing protein, expressed	gene	Yip1 domain containing protein, expressed	chr1	37575844	37578066	+	three_prime_UTR,promoter,downstream
3	LOC_Os09g29404	glycogen operon protein glgX, putative, expressed	gene	glycogen operon protein glgX, putative, expressed	chr9	17850429	17867668	-	CDS
3	LOC_Os04g21340	expressed protein	gene	expressed protein	chr4	12037731	12039406	+	five_prime_UTR,promoter
3	LOC_Os06g08530	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	gene	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	chr6	4212120	4217604	-	CDS,three_prime_UTR
3	LOC_Os02g37020	expressed protein	gene	expressed protein	chr2	22349305	22356188	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g58880	exo70 exocyst complex subunit, putative, expressed	gene	exo70 exocyst complex subunit, putative, expressed	chr4	34836503	34843057	-	CDS
3	LOC_Os04g31950	LSM domain containing protein, expressed	gene	LSM domain containing protein, expressed	chr4	18962287	18967624	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g01620	shwachman-Bodian-Diamond syndrome protein, putative, expressed	gene	shwachman-Bodian-Diamond syndrome protein, putative, expressed	chr8	366761	369986	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g40934	flavonol synthase/flavanone 3-hydroxylase, putative, expressed	gene	flavonol synthase/flavanone 3-hydroxylase, putative, expressed	chr10	21916998	21922166	-	CDS,three_prime_UTR,five_prime_UTR,promoter
3	LOC_Os06g41710	CW-type Zinc Finger, putative, expressed	gene	CW-type Zinc Finger, putative, expressed	chr6	24985841	24997107	-	CDS
3	LOC_Os07g39400	polyol transporter 5, putative, expressed	gene	polyol transporter 5, putative, expressed	chr7	23597400	23603373	-	CDS
3	LOC_Os04g44890	tRNA-dihydrouridine synthase, putative, expressed	gene	tRNA-dihydrouridine synthase, putative, expressed	chr4	26380394	26386558	+	CDS,three_prime_UTR
3	LOC_Os06g12669	unknown	gene	unknown	chr6	6920622	6921359	+	CDS,promoter,downstream
3	LOC_Os03g11530	nucleotide pyrophosphatase/phosphodiesterase, putative, expressed	gene	nucleotide pyrophosphatase/phosphodiesterase, putative, expressed	chr3	5972868	5978082	+	CDS,promoter
3	LOC_Os01g57440	DNA repair metallo-beta-lactamase, putative, expressed	gene	DNA repair metallo-beta-lactamase, putative, expressed	chr1	33194284	33196841	-	CDS,downstream
3	LOC_Os10g17280	ATP synthase gamma chain, putative, expressed	gene	ATP synthase gamma chain, putative, expressed	chr10	8620714	8626090	+	CDS
3	LOC_Os01g19940	expressed protein	gene	expressed protein	chr1	11315577	11319173	+	CDS
3	LOC_Os02g47225	hypothetical protein	gene	hypothetical protein	chr2	28817200	28820732	+	CDS
3	LOC_Os05g42280	expressed protein	gene	expressed protein	chr5	24666899	24670366	-	CDS
3	LOC_Os12g08810	VTC2, putative, expressed	gene	VTC2, putative, expressed	chr12	4531910	4536219	-	CDS,promoter
3	LOC_Os11g17014	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr11	9418198	9427172	+	CDS
3	LOC_Os06g30230	expressed protein	gene	expressed protein	chr6	17443589	17445408	-	CDS,promoter
3	LOC_Os02g22374	expressed protein	gene	expressed protein	chr2	13361030	13364224	-	CDS,three_prime_UTR,five_prime_UTR,promoter
3	LOC_Os06g22070	mitochondrial glycoprotein, putative, expressed	gene	mitochondrial glycoprotein, putative, expressed	chr6	12800433	12803045	+	CDS,three_prime_UTR,promoter
3	LOC_Os05g08930	chloroplast lumen common family protein, putative, expressed	gene	chloroplast lumen common family protein, putative, expressed	chr5	4938236	4940937	-	CDS
3	LOC_Os12g40500	expressed protein	gene	expressed protein	chr12	25023540	25027733	+	CDS,three_prime_UTR,promoter
3	LOC_Os11g06210	conserved hypothetical protein	gene	conserved hypothetical protein	chr11	2962130	2963611	+	CDS,promoter
3	LOC_Os01g73960	drought induced 19 protein, putative, expressed	gene	drought induced 19 protein, putative, expressed	chr1	42844713	42847107	+	three_prime_UTR,CDS,downstream
3	LOC_Os03g16400	expressed protein	gene	expressed protein	chr3	9046492	9050394	+	CDS,three_prime_UTR
3	LOC_Os01g67340	STRUBBELIG-RECEPTOR FAMILY 8 precursor, putative, expressed	gene	STRUBBELIG-RECEPTOR FAMILY 8 precursor, putative, expressed	chr1	39090685	39094296	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g10755	expressed protein	gene	expressed protein	chr3	5490325	5493424	-	three_prime_UTR,promoter
3	LOC_Os01g17250	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	gene	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	chr1	9916450	9920571	-	three_prime_UTR,promoter
3	LOC_Os11g12800	glycerophosphoryl diester phosphodiesterase family protein, putative, expressed	gene	glycerophosphoryl diester phosphodiesterase family protein, putative, expressed	chr11	7246180	7250281	-	CDS,three_prime_UTR
3	LOC_Os12g07810	aldehyde dehydrogenase, putative, expressed	gene	aldehyde dehydrogenase, putative, expressed	chr12	3946119	3954921	+	CDS,downstream
3	LOC_Os09g36320	tyrosine protein kinase domain containing protein, putative, expressed	gene	tyrosine protein kinase domain containing protein, putative, expressed	chr9	20961549	20967113	-	CDS
3	LOC_Os06g12220	HVA22, putative, expressed	gene	HVA22, putative, expressed	chr6	6558754	6562395	-	CDS,three_prime_UTR
3	LOC_Os10g35470	oxidoreductase, putative, expressed	gene	oxidoreductase, putative, expressed	chr10	18909883	18913769	+	CDS,three_prime_UTR
3	LOC_Os03g26200	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr3	14991464	14996060	+	CDS,three_prime_UTR
3	LOC_Os03g18370	MRH1, putative, expressed	gene	MRH1, putative, expressed	chr3	10291207	10294586	-	CDS,promoter
3	LOC_Os01g16000	CRAL/TRIO domain containing protein, expressed	gene	CRAL/TRIO domain containing protein, expressed	chr1	9003101	9007221	-	CDS,three_prime_UTR
3	LOC_Os09g12770	Myb-like DNA-binding domain containing protein, putative, expressed	gene	Myb-like DNA-binding domain containing protein, putative, expressed	chr9	7328540	7332290	+	CDS,three_prime_UTR
3	LOC_Os02g53780	expressed protein	gene	expressed protein	chr2	32939790	32945136	+	CDS,three_prime_UTR,promoter
3	LOC_Os06g45710	phosphoglycerate kinase protein, putative, expressed	gene	phosphoglycerate kinase protein, putative, expressed	chr6	27675320	27678787	-	CDS
3	LOC_Os02g17280	gamma-secretase subunit APH-1B, putative, expressed	gene	gamma-secretase subunit APH-1B, putative, expressed	chr2	9902627	9907886	+	CDS
3	LOC_Os03g62240	expressed protein	gene	expressed protein	chr3	35246003	35247071	-	CDS,promoter,downstream
3	LOC_Os01g46580	actin-related protein 2/3 complex subunit 2, putative, expressed	gene	actin-related protein 2/3 complex subunit 2, putative, expressed	chr1	26526432	26531523	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g09550	expressed protein	gene	expressed protein	chr12	5019929	5027364	+	three_prime_UTR
3	LOC_Os04g51910	proteasome/cyclosome repeat containing protein, expressed	gene	proteasome/cyclosome repeat containing protein, expressed	chr4	30613598	30617938	-	CDS,promoter
3	LOC_Os05g42330	secretory carrier-associated membrane protein, putative, expressed	gene	secretory carrier-associated membrane protein, putative, expressed	chr5	24699576	24705184	-	CDS,three_prime_UTR
3	LOC_Os09g32740	ubiquitin carboxyl-terminal hydrolase family protein, expressed	gene	ubiquitin carboxyl-terminal hydrolase family protein, expressed	chr9	19521702	19527377	-	CDS,three_prime_UTR
3	LOC_Os01g50060	1-aminocyclopropane-1-carboxylate deaminase, putative, expressed	gene	1-aminocyclopropane-1-carboxylate deaminase, putative, expressed	chr1	28755002	28758249	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g39650	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr6	23546465	23548624	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g06970	HEN1, putative, expressed	gene	HEN1, putative, expressed	chr7	3428444	3433748	-	CDS,downstream
3	LOC_Os04g16940	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr4	9257969	9260643	-	CDS
3	LOC_Os10g03730	OsFBX347 - F-box domain containing protein, expressed	gene	OsFBX347 - F-box domain containing protein, expressed	chr10	1680057	1683255	-	CDS
3	LOC_Os06g06490	U-box domain containing heat shock protein, putative, expressed	gene	U-box domain containing heat shock protein, putative, expressed	chr6	3050105	3054710	+	CDS
3	LOC_Os07g05190	leucine-rich repeat family protein, putative, expressed	gene	leucine-rich repeat family protein, putative, expressed	chr7	2312397	2318010	-	CDS,three_prime_UTR
3	LOC_Os05g37950	guanylyl cyclase, putative, expressed	gene	guanylyl cyclase, putative, expressed	chr5	22200473	22204448	-	CDS,three_prime_UTR
3	LOC_Os05g48040	MATE efflux family protein, putative, expressed	gene	MATE efflux family protein, putative, expressed	chr5	27479483	27483430	+	three_prime_UTR,CDS,downstream
3	LOC_Os09g07160	expressed protein	gene	expressed protein	chr9	3499534	3504050	-	CDS,three_prime_UTR
3	LOC_Os12g41680	No apical meristem protein, putative, expressed	gene	No apical meristem protein, putative, expressed	chr12	25767338	25772947	+	CDS
3	LOC_Os01g52480	senescence-associated protein, putative, expressed	gene	senescence-associated protein, putative, expressed	chr1	30154620	30156720	+	three_prime_UTR,downstream
3	LOC_Os12g40830	kinase, pfkB family, putative, expressed	gene	kinase, pfkB family, putative, expressed	chr12	25237928	25243437	+	CDS
3	LOC_Os05g38219	expressed protein	gene	expressed protein	chr5	22343880	22349853	+	three_prime_UTR,promoter
3	LOC_Os08g35210	ferric reductase, putative, expressed	gene	ferric reductase, putative, expressed	chr8	22207968	22217639	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g40890	GLTP domain containing protein, putative, expressed	gene	GLTP domain containing protein, putative, expressed	chr2	24774022	24776955	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g40050	receptor-like protein kinase 2 precursor, putative, expressed	gene	receptor-like protein kinase 2 precursor, putative, expressed	chr5	23461508	23465119	+	CDS,three_prime_UTR
3	LOC_Os12g01360	expressed protein	gene	expressed protein	chr12	219456	224846	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g27174	40S ribosomal protein S28, putative, expressed	gene	40S ribosomal protein S28, putative, expressed	chr10	14252266	14253635	-	three_prime_UTR,promoter,downstream
3	LOC_Os03g54970	expressed protein	gene	expressed protein	chr3	31243411	31246136	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g56560	CK1_CaseinKinase_1.6 - CK1 includes the casein kinase 1 kinases, expressed	gene	CK1_CaseinKinase_1.6 - CK1 includes the casein kinase 1 kinases, expressed	chr2	34638997	34643317	+	CDS
3	LOC_Os11g04730	DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative, expressed	gene	DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative, expressed	chr11	2011134	2013681	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g25260	protein binding protein, putative, expressed	gene	protein binding protein, putative, expressed	chr9	15125249	15128036	+	three_prime_UTR,CDS
3	LOC_Os07g07560	CK1_CaseinKinase_1a.6 - CK1 includes the casein kinase 1 kinases, expressed	gene	CK1_CaseinKinase_1a.6 - CK1 includes the casein kinase 1 kinases, expressed	chr7	3772301	3778798	+	CDS
3	LOC_Os01g63780	nsp1-like C-terminal region family protein, expressed	gene	nsp1-like C-terminal region family protein, expressed	chr1	37004703	37010313	-	CDS,three_prime_UTR
3	LOC_Os01g53020	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr1	30471549	30474161	+	CDS
3	LOC_Os03g50730	transmembrane anterior posterior transformation 1, putative, expressed	gene	transmembrane anterior posterior transformation 1, putative, expressed	chr3	28952097	28957518	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g02520	OsMan09 - Endo-Beta-Mannanase, expressed	gene	OsMan09 - Endo-Beta-Mannanase, expressed	chr12	857268	859498	-	CDS,promoter
3	LOC_Os01g38950	CK1_CaseinKinase_1.2 - CK1 includes the casein kinase 1 kinases, expressed	gene	CK1_CaseinKinase_1.2 - CK1 includes the casein kinase 1 kinases, expressed	chr1	21877943	21882992	+	CDS,three_prime_UTR
3	LOC_Os12g44000	ubiquitin-conjugating enzyme E2 W, putative, expressed	gene	ubiquitin-conjugating enzyme E2 W, putative, expressed	chr12	27261821	27265138	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g32130	expressed protein	gene	expressed protein	chr9	19179626	19182733	+	CDS,three_prime_UTR
3	LOC_Os04g15660	receptor kinase, putative	gene	receptor kinase, putative	chr4	8510504	8513273	+	CDS
3	LOC_Os06g48340	hypothetical protein	gene	hypothetical protein	chr6	29233082	29233404	-	CDS,promoter,downstream
3	LOC_Os12g24080	HECT-domain domain containing protein, expressed	gene	HECT-domain domain containing protein, expressed	chr12	13694406	13699917	+	CDS,three_prime_UTR
3	LOC_Os02g08350	expressed protein	gene	expressed protein	chr2	4432871	4438113	-	CDS,three_prime_UTR
3	LOC_Os12g01830	staphylococcal nuclease homologue, putative, expressed	gene	staphylococcal nuclease homologue, putative, expressed	chr12	493925	498354	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g18860	OsPOP23 - Putative Prolyl Oligopeptidase homologue, expressed	gene	OsPOP23 - Putative Prolyl Oligopeptidase homologue, expressed	chr12	10932940	10939812	-	CDS,three_prime_UTR
3	LOC_Os06g20610	seven in absentia protein family domain containing protein, expressed	gene	seven in absentia protein family domain containing protein, expressed	chr6	11866807	11869631	+	five_prime_UTR,CDS
3	LOC_Os06g03860	uncharacterized membrane protein, putative, expressed	gene	uncharacterized membrane protein, putative, expressed	chr6	1553862	1560164	+	CDS,three_prime_UTR
3	LOC_Os10g37899	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr10	20221686	20227951	+	CDS
3	LOC_Os01g07260	expressed protein	gene	expressed protein	chr1	3424737	3428654	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g33620	ubiquitin family protein, putative, expressed	gene	ubiquitin family protein, putative, expressed	chr10	17651240	17653776	+	CDS
3	LOC_Os03g38000	40S ribosomal protein S3-1, putative, expressed	gene	40S ribosomal protein S3-1, putative, expressed	chr3	21096017	21098553	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g20400	DHHC zinc finger domain containing protein, expressed	gene	DHHC zinc finger domain containing protein, expressed	chr6	11717879	11721903	-	three_prime_UTR,promoter
3	LOC_Os06g47840	ZOS6-08 - C2H2 zinc finger protein, expressed	gene	ZOS6-08 - C2H2 zinc finger protein, expressed	chr6	28953543	28956842	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g63550	expressed protein	gene	expressed protein	chr3	35890102	35892262	-	three_prime_UTR
3	LOC_Os04g23820	methionyl-tRNA synthetase, putative, expressed	gene	methionyl-tRNA synthetase, putative, expressed	chr4	13598671	13601147	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g28720	expressed protein	gene	expressed protein	chr7	16814752	16815839	-	three_prime_UTR,promoter
3	LOC_Os03g50900	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr3	29069758	29072949	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g32830	kinase, pfkB family, putative	gene	kinase, pfkB family, putative	chr10	17115379	17118666	+	CDS,downstream
3	LOC_Os05g28090	expressed protein	gene	expressed protein	chr5	16363939	16365703	-	three_prime_UTR
3	LOC_Os12g38800	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr12	23807761	23811674	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g31970	3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed	gene	3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed	chr9	19073643	19078358	+	CDS
3	LOC_Os07g37800	bromodomain domain containing protein, expressed	gene	bromodomain domain containing protein, expressed	chr7	22665043	22669159	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g41370	OsMADS18 - MADS-box family gene with MIKCc type-box, expressed	gene	OsMADS18 - MADS-box family gene with MIKCc type-box, expressed	chr7	24787482	24792890	+	CDS,five_prime_UTR
3	LOC_Os02g49780	expressed protein	gene	expressed protein	chr2	30426274	30428217	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g33710	spermidine synthase, putative, expressed	gene	spermidine synthase, putative, expressed	chr6	19613275	19618692	+	CDS
3	LOC_Os11g12000	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr11	6664260	6676912	+	five_prime_UTR,CDS
3	LOC_Os03g50430	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr3	28767642	28770302	+	CDS
3	LOC_Os07g41090	histone deacetylase, putative, expressed	gene	histone deacetylase, putative, expressed	chr7	24591010	24597360	+	CDS,three_prime_UTR
3	LOC_Os07g10350	S1 RNA binding domain containing protein, expressed	gene	S1 RNA binding domain containing protein, expressed	chr7	5550586	5556153	+	CDS,three_prime_UTR
3	LOC_Os07g07480	HNH endonuclease domain-containing protein, putative, expressed	gene	HNH endonuclease domain-containing protein, putative, expressed	chr7	3723447	3725493	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g10930	NL0E, putative	gene	NL0E, putative	chr12	5903561	5906601	-	CDS,promoter
3	LOC_Os03g61930	ACBP4, putative, expressed	gene	ACBP4, putative, expressed	chr3	35098013	35105403	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g06240	YT521-B-like family domain containing protein, expressed	gene	YT521-B-like family domain containing protein, expressed	chr3	3124929	3129479	-	CDS
3	LOC_Os04g50660	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr4	29796471	29803056	-	CDS,three_prime_UTR
3	LOC_Os06g49430	CGMC_MAPKCMGC_2.11 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	gene	CGMC_MAPKCMGC_2.11 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	chr6	29948831	29953876	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g37434	arginyl-tRNA--protein transferase 1, putative, expressed	gene	arginyl-tRNA--protein transferase 1, putative, expressed	chr5	21840673	21848770	-	CDS,three_prime_UTR
3	LOC_Os09g21460	expressed protein	gene	expressed protein	chr9	12974275	12976292	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g61340	hydrolase, alpha/beta fold family domain containing protein, expressed	gene	hydrolase, alpha/beta fold family domain containing protein, expressed	chr3	34813555	34816399	-	CDS
3	LOC_Os01g61710	coatomer subunit delta, putative, expressed	gene	coatomer subunit delta, putative, expressed	chr1	35699391	35707614	-	CDS,three_prime_UTR,downstream
3	LOC_Os05g12380	expressed protein	gene	expressed protein	chr5	7123812	7127094	+	CDS
3	LOC_Os12g37060	expressed protein	gene	expressed protein	chr12	22677249	22679788	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g33370	expressed protein	gene	expressed protein	chr6	19437628	19440383	-	CDS,three_prime_UTR
3	LOC_Os11g16480	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr11	9108378	9113049	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g03920	TKL_IRAK_DUF26-lf.3 - DUF26 kinases have homology to DUF26 containing loci, expressed	gene	TKL_IRAK_DUF26-lf.3 - DUF26 kinases have homology to DUF26 containing loci, expressed	chr5	1752371	1755712	+	CDS
3	LOC_Os10g26060	glutelin, putative, expressed	gene	glutelin, putative, expressed	chr10	13426009	13428205	-	five_prime_UTR,CDS,promoter,downstream
3	LOC_Os12g05650	ACT domain containing protein, expressed	gene	ACT domain containing protein, expressed	chr12	2594369	2599080	-	CDS
3	LOC_Os02g58450	uncharacterized ACR, COG1399 family protein, expressed	gene	uncharacterized ACR, COG1399 family protein, expressed	chr2	35734936	35738793	-	CDS,three_prime_UTR
3	LOC_Os02g33540	translational activator family protein, putative, expressed	gene	translational activator family protein, putative, expressed	chr2	19936642	19942502	+	CDS,downstream
3	LOC_Os09g36240	deoxyribodipyrimidine photolyase family protein, expressed	gene	deoxyribodipyrimidine photolyase family protein, expressed	chr9	20897098	20903034	+	CDS,three_prime_UTR
3	LOC_Os03g16210	tropinone reductase, putative, expressed	gene	tropinone reductase, putative, expressed	chr3	8937286	8940257	-	CDS,three_prime_UTR
3	LOC_Os06g11380	geminivirus Rep-interacting motor protein, putative, expressed	gene	geminivirus Rep-interacting motor protein, putative, expressed	chr6	5981670	5986672	-	CDS,three_prime_UTR
3	LOC_Os06g41480	vrga1, putative, expressed	gene	vrga1, putative, expressed	chr6	24865900	24870213	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g21460	expressed protein	gene	expressed protein	chr10	10917068	10921497	+	three_prime_UTR,downstream
3	LOC_Os06g06810	OsSub49 - Putative Subtilisin homologue, expressed	gene	OsSub49 - Putative Subtilisin homologue, expressed	chr6	3212519	3218043	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g49380	PWWP domain containing protein, expressed	gene	PWWP domain containing protein, expressed	chr7	29575595	29578597	+	three_prime_UTR,downstream
3	LOC_Os10g32348	PsbP, putative	gene	PsbP, putative	chr10	16900432	16905520	-	CDS
3	LOC_Os02g37140	expressed protein	gene	expressed protein	chr2	22446828	22451878	-	three_prime_UTR,downstream
3	LOC_Os04g31340	CBS domain containing membrane protein, putative, expressed	gene	CBS domain containing membrane protein, putative, expressed	chr4	18574946	18580105	-	CDS,promoter
3	LOC_Os08g30740	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr8	18957411	18963625	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g50380	glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed	gene	glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed	chr5	28809149	28814632	-	CDS,promoter
3	LOC_Os03g20949	phospholipid-transporting ATPase, putative, expressed	gene	phospholipid-transporting ATPase, putative, expressed	chr3	11882514	11887605	-	CDS
3	LOC_Os01g66160	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr1	38434417	38436031	+	CDS,downstream
3	LOC_Os01g04870	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr1	2249820	2254073	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g14510	expressed protein	gene	expressed protein	chr4	8112708	8121585	-	CDS,three_prime_UTR
3	LOC_Os02g21240	OsFBX48 - F-box domain containing protein, expressed	gene	OsFBX48 - F-box domain containing protein, expressed	chr2	12600448	12604232	-	CDS,three_prime_UTR
3	LOC_Os12g37360	miro, putative, expressed	gene	miro, putative, expressed	chr12	22906205	22910181	-	CDS
3	LOC_Os08g09520	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr8	5518882	5522437	-	three_prime_UTR
3	LOC_Os01g56540	histone-lysine N-methyltransferase SUVR3, putative, expressed	gene	histone-lysine N-methyltransferase SUVR3, putative, expressed	chr1	32593316	32596221	-	CDS,downstream
3	LOC_Os01g59760	bZIP transcription factor, putative, expressed	gene	bZIP transcription factor, putative, expressed	chr1	34564249	34567247	-	three_prime_UTR
3	LOC_Os11g06010	helix-loop-helix DNA-binding protein, putative, expressed	gene	helix-loop-helix DNA-binding protein, putative, expressed	chr11	2827505	2833611	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g42320	AT hook motif family protein, expressed	gene	AT hook motif family protein, expressed	chr4	24853782	24860663	-	CDS
3	LOC_Os08g17680	stromal cell-derived factor 2-like protein precursor, putative, expressed	gene	stromal cell-derived factor 2-like protein precursor, putative, expressed	chr8	10809316	10812338	-	CDS,three_prime_UTR
3	LOC_Os11g09640	OsFBX408 - F-box domain containing protein, expressed	gene	OsFBX408 - F-box domain containing protein, expressed	chr11	5148493	5152230	-	CDS,three_prime_UTR
3	LOC_Os11g06580	OsFBX397 - F-box domain containing protein, expressed	gene	OsFBX397 - F-box domain containing protein, expressed	chr11	3174843	3177529	+	three_prime_UTR,downstream
3	LOC_Os02g45590	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr2	27729978	27735070	-	CDS
3	LOC_Os02g02970	expressed protein	gene	expressed protein	chr2	1162143	1165062	+	CDS,downstream
3	LOC_Os09g30105	conserved hypothetical protein	gene	conserved hypothetical protein	chr9	18300263	18303036	-	CDS,downstream
3	LOC_Os05g06690	HECT-domain domain containing protein, expressed	gene	HECT-domain domain containing protein, expressed	chr5	3472282	3485083	+	CDS,three_prime_UTR
3	LOC_Os10g32850	hypothetical protein	gene	hypothetical protein	chr10	17121587	17123849	-	CDS,promoter
3	LOC_Os09g26580	expressed protein	gene	expressed protein	chr9	16096464	16101820	+	three_prime_UTR,promoter
3	LOC_Os10g37730	pollen ankyrin, putative, expressed	gene	pollen ankyrin, putative, expressed	chr10	20113367	20118129	-	CDS,three_prime_UTR
3	LOC_Os10g33130	leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed	gene	leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed	chr10	17286511	17290692	-	CDS
3	LOC_Os10g41780	chlorophyllide a oxygenase, chloroplast precursor, putative, expressed	gene	chlorophyllide a oxygenase, chloroplast precursor, putative, expressed	chr10	22410672	22415011	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g58570	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr3	33338979	33342857	+	CDS,three_prime_UTR
3	LOC_Os01g07140	kelch repeat-containing protein, putative, expressed	gene	kelch repeat-containing protein, putative, expressed	chr1	3360963	3366663	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g36830	Skp1 family, dimerisation domain containing protein, expressed	gene	Skp1 family, dimerisation domain containing protein, expressed	chr9	21242708	21245347	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g33020	trafficking protein particle complex subunit 1, putative, expressed	gene	trafficking protein particle complex subunit 1, putative, expressed	chr1	18134242	18137289	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g53610	selenium-binding protein, related, putative, expressed	gene	selenium-binding protein, related, putative, expressed	chr1	30778349	30781683	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g25624	phosphate/phosphate translocator, putative, expressed	gene	phosphate/phosphate translocator, putative, expressed	chr8	15589545	15596404	+	CDS,three_prime_UTR
3	LOC_Os01g49340	arginine/serine-rich coiled-coil protein 1, putative, expressed	gene	arginine/serine-rich coiled-coil protein 1, putative, expressed	chr1	28366932	28369488	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g02424	ZOS2-02 - C2H2 zinc finger protein, expressed	gene	ZOS2-02 - C2H2 zinc finger protein, expressed	chr2	853767	859880	-	CDS,three_prime_UTR
3	LOC_Os06g38650	receptor-like protein kinase precursor, putative, expressed	gene	receptor-like protein kinase precursor, putative, expressed	chr6	22950399	22953848	+	CDS
3	LOC_Os11g06190	expressed protein	gene	expressed protein	chr11	2948973	2954715	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g19540	expressed protein	gene	expressed protein	chr7	11581849	11583822	+	CDS,three_prime_UTR,promoter
3	LOC_Os10g30100	3-5 exonuclease family protein, putative, expressed	gene	3-5 exonuclease family protein, putative, expressed	chr10	15566673	15573135	-	CDS
3	LOC_Os04g58330	expressed protein	gene	expressed protein	chr4	34532651	34536140	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g06460	dnaJ domain containing protein, expressed	gene	dnaJ domain containing protein, expressed	chr8	3621707	3624002	-	CDS,three_prime_UTR
3	LOC_Os01g50970	expressed protein	gene	expressed protein	chr1	29284327	29287673	+	three_prime_UTR,downstream
3	LOC_Os03g51950	expressed protein	gene	expressed protein	chr3	29787738	29790840	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g57460	frataxin, putative, expressed	gene	frataxin, putative, expressed	chr1	33204133	33207642	+	CDS
3	LOC_Os05g19270	MSH-like DNA mismatch repair protein, putative, expressed	gene	MSH-like DNA mismatch repair protein, putative, expressed	chr5	11189344	11198004	+	CDS
3	LOC_Os12g03870	major facilitator superfamily antiporter, putative	gene	major facilitator superfamily antiporter, putative	chr12	1593733	1599962	-	CDS,downstream
3	LOC_Os04g32550	defender against cell death 1, putative, expressed	gene	defender against cell death 1, putative, expressed	chr4	19426228	19428944	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g06880	EMB2758, putative, expressed	gene	EMB2758, putative, expressed	chr2	3465968	3469077	+	CDS,three_prime_UTR
3	LOC_Os09g28310	bZIP transcription factor, putative, expressed	gene	bZIP transcription factor, putative, expressed	chr9	17188975	17193012	+	CDS
3	LOC_Os11g45924	OsWRKY41 - Superfamily of TFs having WRKY and zinc finger domains	gene	OsWRKY41 - Superfamily of TFs having WRKY and zinc finger domains	chr11	27318004	27320329	-	CDS,promoter
3	LOC_Os08g44370	inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed	gene	inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed	chr8	27920112	27924100	-	CDS,three_prime_UTR
3	LOC_Os12g18880	mago nashi, putative, expressed	gene	mago nashi, putative, expressed	chr12	10956867	10960042	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g26814	UDP-N-acetylglucosamine transferase subunit ALG13, putative, expressed	gene	UDP-N-acetylglucosamine transferase subunit ALG13, putative, expressed	chr2	15734254	15737106	+	five_prime_UTR,CDS
3	LOC_Os01g05670	3-oxo-5-alpha-steroid 4-dehydrogenase, putative, expressed	gene	3-oxo-5-alpha-steroid 4-dehydrogenase, putative, expressed	chr1	2706498	2710428	-	CDS
3	LOC_Os07g02910	OsFBL33 - F-box domain and LRR containing protein, expressed	gene	OsFBL33 - F-box domain and LRR containing protein, expressed	chr7	1086388	1088210	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g44800	DUF593 domain containing protein, expressed	gene	DUF593 domain containing protein, expressed	chr3	25262343	25266039	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g36710	transposon protein, putative, Pong sub-class	gene	transposon protein, putative, Pong sub-class	chr1	20378372	20382323	-	CDS,downstream
3	LOC_Os01g73430	RNA polymerase IV largest subunit, putative	gene	RNA polymerase IV largest subunit, putative	chr1	42548799	42555818	-	CDS,downstream
3	LOC_Os10g41170	dehydrogenase, putative, expressed	gene	dehydrogenase, putative, expressed	chr10	22045610	22048695	+	CDS,downstream
3	LOC_Os06g21099	expressed protein	gene	expressed protein	chr6	12185509	12189659	+	three_prime_UTR
3	LOC_Os01g49630	proteophosphoglycan ppg4, putative, expressed	gene	proteophosphoglycan ppg4, putative, expressed	chr1	28533776	28535455	+	CDS
3	LOC_Os01g40700	expressed protein	gene	expressed protein	chr1	22998947	23001414	+	three_prime_UTR,downstream
3	LOC_Os07g29360	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr7	17229241	17244365	-	CDS,three_prime_UTR
3	LOC_Os01g16100	translin, putative, expressed	gene	translin, putative, expressed	chr1	9066360	9070396	-	CDS,three_prime_UTR
3	LOC_Os01g57930	CDP-alcohol phosphatidyltransferase, putative, expressed	gene	CDP-alcohol phosphatidyltransferase, putative, expressed	chr1	33488241	33491915	-	CDS,three_prime_UTR
3	LOC_Os09g07294	purity of essence, putative, expressed	gene	purity of essence, putative, expressed	chr9	3585600	3588801	-	CDS,downstream
3	LOC_Os07g44800	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A, putative, expressed	gene	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A, putative, expressed	chr7	26733665	26737540	+	CDS,promoter
3	LOC_Os07g35410	TKL_IRAK_DUF26-lc.18 - DUF26 kinases have homology to DUF26 containing loci, expressed	gene	TKL_IRAK_DUF26-lc.18 - DUF26 kinases have homology to DUF26 containing loci, expressed	chr7	21174059	21177570	+	CDS
3	LOC_Os08g06490	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr8	3676034	3679204	+	three_prime_UTR,promoter
3	LOC_Os03g48450	SCARECROW, putative, expressed	gene	SCARECROW, putative, expressed	chr3	27580772	27585885	-	three_prime_UTR,promoter
3	LOC_Os02g03580	transcription factor, putative, expressed	gene	transcription factor, putative, expressed	chr2	1457113	1461449	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os11g35030	growth regulating factor protein, putative, expressed	gene	growth regulating factor protein, putative, expressed	chr11	20055691	20059291	+	CDS
3	LOC_Os02g46120	regulatory protein, putative, expressed	gene	regulatory protein, putative, expressed	chr2	28102763	28107558	-	three_prime_UTR
3	LOC_Os10g34310	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr10	18226390	18228785	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g45950	outer mitochondrial membrane porin, putative, expressed	gene	outer mitochondrial membrane porin, putative, expressed	chr5	26565524	26569025	+	CDS,promoter
3	LOC_Os03g26210	helix-loop-helix DNA-binding domain containing protein, expressed	gene	helix-loop-helix DNA-binding domain containing protein, expressed	chr3	14998709	15000852	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g23430	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr5	13327498	13333610	-	CDS
3	LOC_Os07g29390	peptidyl-prolyl cis-trans isomerase, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, putative, expressed	chr7	17253916	17259682	-	CDS
3	LOC_Os04g02900	dehydrogenase E1 component domain containing protein, expressed	gene	dehydrogenase E1 component domain containing protein, expressed	chr4	1131429	1135489	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g48810	transcription initiation factor TFIID subunit 11, putative, expressed	gene	transcription initiation factor TFIID subunit 11, putative, expressed	chr1	28007982	28010851	+	CDS,three_prime_UTR
3	LOC_Os10g36200	heavy metal-associated domain containing protein, expressed	gene	heavy metal-associated domain containing protein, expressed	chr10	19281533	19282642	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g03810	CAMK_KIN1/SNF1/Nim1_like.37 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_KIN1/SNF1/Nim1_like.37 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr12	1553888	1559308	+	CDS,three_prime_UTR
3	LOC_Os03g02680	cyclin-dependent kinase A-1, putative, expressed	gene	cyclin-dependent kinase A-1, putative, expressed	chr3	996598	1000241	+	CDS
3	LOC_Os07g38300	ribosome recycling factor, putative, expressed	gene	ribosome recycling factor, putative, expressed	chr7	23002387	23007504	+	CDS,three_prime_UTR
3	LOC_Os03g31839	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr3	18210154	18221427	+	CDS
3	LOC_Os12g41200	KIP1, putative, expressed	gene	KIP1, putative, expressed	chr12	25502480	25511306	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g41710	Protein kinase domain containing protein, expressed	gene	Protein kinase domain containing protein, expressed	chr12	25787143	25791093	-	CDS,promoter
3	LOC_Os02g02520	expressed protein	gene	expressed protein	chr2	896074	900377	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g27740	dnaJ domain containing protein, expressed	gene	dnaJ domain containing protein, expressed	chr1	15473258	15477296	-	three_prime_UTR,promoter
3	LOC_Os12g35350	kelch repeat protein, putative, expressed	gene	kelch repeat protein, putative, expressed	chr12	21454588	21460248	+	CDS,downstream
3	LOC_Os04g58490	conserved hypothetical protein	gene	conserved hypothetical protein	chr4	34605676	34606279	-	CDS,promoter,downstream
3	LOC_Os05g09620	SCC3, putative, expressed	gene	SCC3, putative, expressed	chr5	5424284	5433068	+	CDS
3	LOC_Os01g63240	reticulon domain containing protein, putative, expressed	gene	reticulon domain containing protein, putative, expressed	chr1	36651362	36654671	-	CDS,downstream
3	LOC_Os08g15040	ADP-ribosylation factor, putative, expressed	gene	ADP-ribosylation factor, putative, expressed	chr8	9080490	9085618	+	CDS,three_prime_UTR
3	LOC_Os04g51960	expressed protein	gene	expressed protein	chr4	30657619	30661227	+	CDS,three_prime_UTR
3	LOC_Os03g10750	CUE domain containing protein, expressed	gene	CUE domain containing protein, expressed	chr3	5482359	5488241	-	CDS,downstream
3	LOC_Os12g42230	transketolase, putative, expressed	gene	transketolase, putative, expressed	chr12	26166573	26170025	+	CDS,three_prime_UTR
3	LOC_Os03g03590	transporter, monovalent cation:proton antiporter-2 family, putative, expressed	gene	transporter, monovalent cation:proton antiporter-2 family, putative, expressed	chr3	1566978	1570983	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g15930	expressed protein	gene	expressed protein	chr2	9021452	9023137	+	CDS,promoter
3	LOC_Os02g20170	drought induced 19 protein, putative, expressed	gene	drought induced 19 protein, putative, expressed	chr2	11882273	11885859	-	CDS,three_prime_UTR
3	LOC_Os07g38640	inactive receptor kinase At2g26730 precursor, putative, expressed	gene	inactive receptor kinase At2g26730 precursor, putative, expressed	chr7	23207461	23209647	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g66200	expressed protein	gene	expressed protein	chr1	38453743	38459521	-	CDS,three_prime_UTR
3	LOC_Os01g18100	OsRhmbd3 - Putative Rhomboid homologue, expressed	gene	OsRhmbd3 - Putative Rhomboid homologue, expressed	chr1	10136191	10139135	-	three_prime_UTR
3	LOC_Os08g06130	expressed protein	gene	expressed protein	chr8	3381474	3386012	-	CDS,three_prime_UTR
3	LOC_Os06g44840	prenyltransferase, putative, expressed	gene	prenyltransferase, putative, expressed	chr6	27086458	27091922	+	CDS,three_prime_UTR
3	LOC_Os06g03990	aminotransferase, classes I and II, domain containing protein, expressed	gene	aminotransferase, classes I and II, domain containing protein, expressed	chr6	1628718	1632630	+	CDS,three_prime_UTR
3	LOC_Os01g08550	aminoacyl-tRNA synthetase, putative, expressed	gene	aminoacyl-tRNA synthetase, putative, expressed	chr1	4244417	4248851	-	CDS
3	LOC_Os02g05890	EMB1303, putative, expressed	gene	EMB1303, putative, expressed	chr2	2922352	2925071	-	CDS,three_prime_UTR
3	LOC_Os08g19374	expressed protein	gene	expressed protein	chr8	11586798	11589918	+	three_prime_UTR,downstream
3	LOC_Os12g40419	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr12	24981489	24992915	+	CDS,downstream
3	LOC_Os01g48300	ATP synthase protein I related, putative, expressed	gene	ATP synthase protein I related, putative, expressed	chr1	27676150	27680516	-	three_prime_UTR,downstream
3	LOC_Os12g16220	nmrA-like family domain containing protein, expressed	gene	nmrA-like family domain containing protein, expressed	chr12	9275595	9280952	-	CDS
3	LOC_Os01g60350	hypothetical protein	gene	hypothetical protein	chr1	34907036	34911559	-	CDS
3	LOC_Os04g35510	CENP-E-like kinetochore protein, putative, expressed	gene	CENP-E-like kinetochore protein, putative, expressed	chr4	21437423	21439583	-	five_prime_UTR,CDS
3	LOC_Os08g03650	BTBN17 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed	gene	BTBN17 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed	chr8	1722632	1728998	-	CDS,three_prime_UTR
3	LOC_Os02g25880	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr2	15155277	15160482	+	CDS,promoter
3	LOC_Os01g15580	disease resistance protein RGA2, putative, expressed	gene	disease resistance protein RGA2, putative, expressed	chr1	8750071	8754448	+	CDS
3	LOC_Os01g56290	expressed protein	gene	expressed protein	chr1	32423398	32426465	+	CDS,three_prime_UTR
3	LOC_Os03g46650	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr3	26391617	26399638	-	CDS
3	LOC_Os02g42520	dehydrogenase, putative, expressed	gene	dehydrogenase, putative, expressed	chr2	25559991	25563167	-	CDS,three_prime_UTR,downstream
3	LOC_Os11g36440	amine oxidase, flavin-containing, domain containing protein, expressed	gene	amine oxidase, flavin-containing, domain containing protein, expressed	chr11	21019779	21023971	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g44150	CorA-like magnesium transporter protein, putative, expressed	gene	CorA-like magnesium transporter protein, putative, expressed	chr6	26634635	26638760	-	CDS,three_prime_UTR
3	LOC_Os03g38010	nuf2 family protein, expressed	gene	nuf2 family protein, expressed	chr3	21100638	21104522	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g06070	conserved hypothetical protein	gene	conserved hypothetical protein	chr12	2829046	2830938	+	CDS,promoter
3	LOC_Os12g40520	MATH domain containing protein, expressed	gene	MATH domain containing protein, expressed	chr12	25036052	25044093	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g56250	LRR receptor-like protein kinase, putative, expressed	gene	LRR receptor-like protein kinase, putative, expressed	chr3	32036720	32041291	-	CDS
3	LOC_Os02g04690	cycloartenol synthase, putative, expressed	gene	cycloartenol synthase, putative, expressed	chr2	2110921	2120419	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g31860	ureide permease, putative, expressed	gene	ureide permease, putative, expressed	chr12	19152104	19157387	-	CDS,three_prime_UTR
3	LOC_Os06g06380	NBS-LRR type disease resistance protein, putative, expressed	gene	NBS-LRR type disease resistance protein, putative, expressed	chr6	2972522	2978497	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g04990	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr1	2348919	2352502	-	CDS,three_prime_UTR
3	LOC_Os04g29920	reticulon domain containing protein, putative, expressed	gene	reticulon domain containing protein, putative, expressed	chr4	17666046	17667942	+	CDS,three_prime_UTR
3	LOC_Os01g53700	mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed	gene	mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed	chr1	30849545	30855183	-	CDS
3	LOC_Os09g38040	hydrolase, NUDIX family protein, expressed	gene	hydrolase, NUDIX family protein, expressed	chr9	21922408	21925576	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g25700	UDP-glucose 6-dehydrogenase, putative, expressed	gene	UDP-glucose 6-dehydrogenase, putative, expressed	chr12	14890511	14893771	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os02g04325	expressed protein	gene	expressed protein	chr2	1905767	1908082	+	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g43160	expressed protein	gene	expressed protein	chr4	25363238	25365463	-	three_prime_UTR,promoter,downstream
3	LOC_Os03g16460	expressed protein	gene	expressed protein	chr3	9074559	9078345	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os09g38320	phytoene synthase, chloroplast precursor, putative, expressed	gene	phytoene synthase, chloroplast precursor, putative, expressed	chr9	22041486	22044912	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g07400	cullin, putative, expressed	gene	cullin, putative, expressed	chr8	4152346	4156254	-	CDS
3	LOC_Os01g12670	expressed protein	gene	expressed protein	chr1	6978613	6984778	+	three_prime_UTR
3	LOC_Os07g46780	tyrosine-specific transport protein, putative, expressed	gene	tyrosine-specific transport protein, putative, expressed	chr7	27949869	27956494	-	CDS
3	LOC_Os05g23880	lipoxygenase, putative, expressed	gene	lipoxygenase, putative, expressed	chr5	13676611	13683112	+	CDS
3	LOC_Os12g44360	sodium/hydrogen exchanger 7, putative, expressed	gene	sodium/hydrogen exchanger 7, putative, expressed	chr12	27460759	27475209	-	CDS,three_prime_UTR
3	LOC_Os02g28810	ribosomal protein, putative, expressed	gene	ribosomal protein, putative, expressed	chr2	17029705	17032328	+	CDS
3	LOC_Os05g49240	homeodomain-related, putative, expressed	gene	homeodomain-related, putative, expressed	chr5	28190869	28192436	+	five_prime_UTR,CDS,promoter,downstream
3	LOC_Os07g42880	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr7	25671207	25673081	+	CDS,downstream
3	LOC_Os08g32690	expressed protein	gene	expressed protein	chr8	20245934	20251868	-	CDS,three_prime_UTR
3	LOC_Os01g48720	RNA polymerase III subunit RPC82 family protein, putative, expressed	gene	RNA polymerase III subunit RPC82 family protein, putative, expressed	chr1	27937724	27946003	+	CDS,three_prime_UTR
3	LOC_Os03g50940	cytochrome c oxidase assembly protein COX11, mitochondrial precursor, putative, expressed	gene	cytochrome c oxidase assembly protein COX11, mitochondrial precursor, putative, expressed	chr3	29093647	29096638	-	three_prime_UTR,CDS
3	LOC_Os02g07350	inositol-1-monophosphatase, putative, expressed	gene	inositol-1-monophosphatase, putative, expressed	chr2	3792677	3796759	-	CDS,promoter
3	LOC_Os10g42830	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr10	23023744	23028285	-	CDS,downstream
3	LOC_Os04g44700	WD-40 repeat family protein, putative, expressed	gene	WD-40 repeat family protein, putative, expressed	chr4	26290131	26296095	+	three_prime_UTR,CDS
3	LOC_Os01g05600	NBS-LRR disease resistance protein, putative	gene	NBS-LRR disease resistance protein, putative	chr1	2668952	2671924	-	CDS,promoter,downstream
3	LOC_Os12g06870	OsNucAP2 - Putative Nucleoporin Autopeptidase homologue, expressed	gene	OsNucAP2 - Putative Nucleoporin Autopeptidase homologue, expressed	chr12	3337064	3343345	+	CDS
3	LOC_Os07g17250	disease resistance RPP13-like protein 1, putative, expressed	gene	disease resistance RPP13-like protein 1, putative, expressed	chr7	10172163	10175833	+	three_prime_UTR,downstream
3	LOC_Os07g20410	expressed protein	gene	expressed protein	chr7	11779176	11785274	+	CDS,three_prime_UTR
3	LOC_Os05g44320	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr5	25726174	25731059	-	CDS,three_prime_UTR
3	LOC_Os03g03900	NIN, putative, expressed	gene	NIN, putative, expressed	chr3	1775267	1779895	-	CDS,three_prime_UTR
3	LOC_Os02g49320	sucrase-related, putative, expressed	gene	sucrase-related, putative, expressed	chr2	30133786	30137583	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g35700	Leucine Rich Repeat family protein, expressed	gene	Leucine Rich Repeat family protein, expressed	chr8	22519606	22526169	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g29620	OsSCP39 - Putative Serine Carboxypeptidase homologue, expressed	gene	OsSCP39 - Putative Serine Carboxypeptidase homologue, expressed	chr7	17409030	17412856	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g25210	OsFBX384 - F-box domain containing protein, expressed	gene	OsFBX384 - F-box domain containing protein, expressed	chr10	12943935	12946762	-	three_prime_UTR,promoter
3	LOC_Os08g38970	transmembrane receptor, putative, expressed	gene	transmembrane receptor, putative, expressed	chr8	24630694	24634480	+	CDS,three_prime_UTR
3	LOC_Os10g02220	peptide transporter PTR2, putative, expressed	gene	peptide transporter PTR2, putative, expressed	chr10	770655	775323	-	five_prime_UTR,CDS
3	LOC_Os04g02820	elongation factor, putative, expressed	gene	elongation factor, putative, expressed	chr4	1088887	1094214	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g54830	expressed protein	gene	expressed protein	chr4	32419983	32423541	+	CDS,promoter
3	LOC_Os05g48680	expressed protein	gene	expressed protein	chr5	27833403	27834076	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g38040	expressed protein	gene	expressed protein	chr11	22099741	22102468	-	three_prime_UTR,promoter
3	LOC_Os05g03200	expressed protein	gene	expressed protein	chr5	1295600	1298596	-	CDS,promoter
3	LOC_Os08g09920	OsFBX277 - F-box domain containing protein, expressed	gene	OsFBX277 - F-box domain containing protein, expressed	chr8	5727028	5731223	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g57280	rp1, putative, expressed	gene	rp1, putative, expressed	chr1	33097028	33103506	+	CDS
3	LOC_Os08g05630	expressed protein	gene	expressed protein	chr8	3008603	3011530	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g01365	expressed protein	gene	expressed protein	chr2	199224	207221	+	CDS,downstream
3	LOC_Os04g36830	DUF567 domain containing protein, putative, expressed	gene	DUF567 domain containing protein, putative, expressed	chr4	22046127	22053892	+	five_prime_UTR,CDS
3	LOC_Os01g49250	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr1	28311010	28316230	+	CDS,three_prime_UTR
3	LOC_Os11g33100	SNARE associated Golgi protein, putative, expressed	gene	SNARE associated Golgi protein, putative, expressed	chr11	19113994	19119232	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g27590	transposon protein, putative, Pong sub-class, expressed	gene	transposon protein, putative, Pong sub-class, expressed	chr1	15388706	15391047	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g47200	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr2	28806522	28808209	-	three_prime_UTR,promoter
3	LOC_Os01g12730	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr1	7042932	7046559	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g43890	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr3	24619371	24627583	-	CDS,three_prime_UTR,downstream
3	LOC_Os08g03676	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr8	1748853	1751471	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g04500	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr3	2096600	2101011	+	CDS,downstream
3	LOC_Os12g30020	cyclin-T1-4, putative, expressed	gene	cyclin-T1-4, putative, expressed	chr12	17927216	17935779	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g28280	peptidase, M24 family protein, putative, expressed	gene	peptidase, M24 family protein, putative, expressed	chr5	16494700	16498454	+	CDS,three_prime_UTR
3	LOC_Os05g01250	SNF7 domain containing protein, putative, expressed	gene	SNF7 domain containing protein, putative, expressed	chr5	174438	177600	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g32320	integral membrane transporter family protein, putative, expressed	gene	integral membrane transporter family protein, putative, expressed	chr5	18780235	18783318	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g47140	CCT/B-box zinc finger protein, putative, expressed	gene	CCT/B-box zinc finger protein, putative, expressed	chr7	28183868	28186917	-	CDS,three_prime_UTR
3	LOC_Os01g73220	peroxidase precursor, putative, expressed	gene	peroxidase precursor, putative, expressed	chr1	42444957	42446610	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g32660	leucine-rich repeat family protein, putative, expressed	gene	leucine-rich repeat family protein, putative, expressed	chr5	19055587	19060582	+	CDS,three_prime_UTR
3	LOC_Os06g09660	auxin response factor, putative, expressed	gene	auxin response factor, putative, expressed	chr6	4925493	4931178	+	CDS,downstream
3	LOC_Os04g30180	F-box/LRR-repeat protein 14, putative, expressed	gene	F-box/LRR-repeat protein 14, putative, expressed	chr4	17840240	17843143	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os01g12950	ubiquitin-conjugating enzyme, putative, expressed	gene	ubiquitin-conjugating enzyme, putative, expressed	chr1	7196022	7213143	+	three_prime_UTR
3	LOC_Os01g32840	expressed protein	gene	expressed protein	chr1	18020962	18023704	+	CDS,downstream
3	LOC_Os05g24601	coatomer subunit delta, putative, expressed	gene	coatomer subunit delta, putative, expressed	chr5	14134083	14139934	+	CDS,three_prime_UTR
3	LOC_Os07g06710	tetratricopeptide repeat, putative, expressed	gene	tetratricopeptide repeat, putative, expressed	chr7	3269361	3274945	-	CDS,three_prime_UTR
3	LOC_Os07g15680	phospholipase D, putative, expressed	gene	phospholipase D, putative, expressed	chr7	9104501	9111925	-	CDS,three_prime_UTR
3	LOC_Os12g43363	fatty acid hydroxylase, putative, expressed	gene	fatty acid hydroxylase, putative, expressed	chr12	26868551	26872324	+	CDS,three_prime_UTR
3	LOC_Os07g43330	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr7	25939614	25942195	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g68770	selenium-binding protein, putative, expressed	gene	selenium-binding protein, putative, expressed	chr1	39947019	39950491	+	CDS
3	LOC_Os04g57560	amine oxidase, flavin-containing, domain containing protein, expressed	gene	amine oxidase, flavin-containing, domain containing protein, expressed	chr4	34059143	34063219	-	CDS
3	LOC_Os01g06000	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr1	2861560	2866272	-	CDS,three_prime_UTR
3	LOC_Os04g52280	dehydrogenase, putative, expressed	gene	dehydrogenase, putative, expressed	chr4	30884431	30890487	+	CDS,three_prime_UTR
3	LOC_Os03g59320	expressed protein	gene	expressed protein	chr3	33764626	33766494	+	three_prime_UTR,downstream
3	LOC_Os03g63770	RCD1, putative, expressed	gene	RCD1, putative, expressed	chr3	35994788	36000409	-	CDS,three_prime_UTR
3	LOC_Os09g07660	 ELMO/CED-12 family protein, putative, expressed	gene	 ELMO/CED-12 family protein, putative, expressed	chr9	3854216	3861968	+	CDS
3	LOC_Os01g74470	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr1	43124919	43133458	-	CDS,three_prime_UTR
3	LOC_Os11g47330	ATP-grasp domain containing protein, expressed	gene	ATP-grasp domain containing protein, expressed	chr11	27951240	27954911	+	CDS,three_prime_UTR
3	LOC_Os08g25290	conserved hypothetical protein	gene	conserved hypothetical protein	chr8	15356632	15358797	+	CDS,promoter
3	LOC_Os02g52470	ATP-binding domain-containing protein, putative, expressed	gene	ATP-binding domain-containing protein, putative, expressed	chr2	32093217	32097106	-	CDS,three_prime_UTR
3	LOC_Os01g47620	expressed protein	gene	expressed protein	chr1	27242399	27245001	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g50890	OsGH3.5 - Probable indole-3-acetic acid-amido synthetase, expressed	gene	OsGH3.5 - Probable indole-3-acetic acid-amido synthetase, expressed	chr5	29137553	29143072	+	CDS,three_prime_UTR
3	LOC_Os01g40470	vacuolar ATP synthase subunit d, putative, expressed	gene	vacuolar ATP synthase subunit d, putative, expressed	chr1	22854414	22858709	-	CDS,three_prime_UTR
3	LOC_Os01g19450	ATP-citrate synthase subunit 1, putative, expressed	gene	ATP-citrate synthase subunit 1, putative, expressed	chr1	10998292	11004989	-	CDS
3	LOC_Os06g36920	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr6	21754621	21757567	-	CDS,promoter
3	LOC_Os01g66180	cytochrome c, putative, expressed	gene	cytochrome c, putative, expressed	chr1	38442584	38445388	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g20860	paramyosin, putative, expressed	gene	paramyosin, putative, expressed	chr6	12049704	12052626	-	CDS,downstream
3	LOC_Os04g42470	regulatory subunit, putative, expressed	gene	regulatory subunit, putative, expressed	chr4	24941576	24949223	-	CDS,three_prime_UTR
3	LOC_Os10g22560	peptide transporter PTR2, putative, expressed	gene	peptide transporter PTR2, putative, expressed	chr10	11619957	11623854	-	CDS
3	LOC_Os06g15410	angel, putative	gene	angel, putative	chr6	8753367	8756479	-	CDS,promoter,downstream
3	LOC_Os01g19850	amino acid permease family protein, putative	gene	amino acid permease family protein, putative	chr1	11253120	11260660	-	CDS
3	LOC_Os04g48140	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr4	28460648	28464310	-	CDS,promoter
3	LOC_Os05g28960	acyltransferase, putative, expressed	gene	acyltransferase, putative, expressed	chr5	16916929	16921833	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g19870	ATP binding protein, putative, expressed	gene	ATP binding protein, putative, expressed	chr3	11170363	11176725	+	CDS,three_prime_UTR
3	LOC_Os03g08620	B3 DNA binding domain containing protein, expressed	gene	B3 DNA binding domain containing protein, expressed	chr3	4436525	4438876	-	three_prime_UTR,promoter
3	LOC_Os12g07730	SWIRM domain containing protein, expressed	gene	SWIRM domain containing protein, expressed	chr12	3878353	3884324	+	CDS,downstream
3	LOC_Os12g05110	pyruvate kinase, putative, expressed	gene	pyruvate kinase, putative, expressed	chr12	2244321	2248835	-	CDS,three_prime_UTR
3	LOC_Os05g49180	protein of unknown function DUF1296 domain containing protein, expressed	gene	protein of unknown function DUF1296 domain containing protein, expressed	chr5	28157463	28166155	+	CDS
3	LOC_Os03g62690	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr3	35466961	35472846	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g44102	remorin C-terminal domain containing protein, putative, expressed	gene	remorin C-terminal domain containing protein, putative, expressed	chr2	26619151	26622001	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g27019	expressed protein	gene	expressed protein	chr3	15466478	15472489	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g14204	expressed protein	gene	expressed protein	chr4	7956287	7959716	-	three_prime_UTR
3	LOC_Os06g35730	ribosomal protein L5, putative, expressed	gene	ribosomal protein L5, putative, expressed	chr6	20850111	20852752	-	CDS,three_prime_UTR
3	LOC_Os07g01950	expressed protein	gene	expressed protein	chr7	582516	585787	+	CDS,three_prime_UTR,promoter
3	LOC_Os12g03270	ELMO/CED-12 family protein, putative, expressed	gene	ELMO/CED-12 family protein, putative, expressed	chr12	1264812	1268154	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g32470	expressed protein	gene	expressed protein	chr4	19307829	19312508	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g58750	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr4	34757870	34764641	+	CDS,three_prime_UTR
3	LOC_Os03g45730	DNA-binding protein-like, putative, expressed	gene	DNA-binding protein-like, putative, expressed	chr3	25803339	25808857	-	CDS
3	LOC_Os04g57220	ubiquitin-conjugating enzyme, putative, expressed	gene	ubiquitin-conjugating enzyme, putative, expressed	chr4	33902638	33905573	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g62100	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr1	35939197	35948428	+	CDS,downstream
3	LOC_Os07g39430	mTERF family protein, expressed	gene	mTERF family protein, expressed	chr7	23618644	23622185	+	CDS,three_prime_UTR
3	LOC_Os03g51900	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr3	29759172	29767224	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g18820	serine threonine kinase, putative, expressed	gene	serine threonine kinase, putative, expressed	chr6	10684597	10689033	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g12464	CHCH domain containing protein, expressed	gene	CHCH domain containing protein, expressed	chr1	6832050	6834300	+	three_prime_UTR,downstream
3	LOC_Os03g39010	possible lysine decarboxylase domain containing protein, expressed	gene	possible lysine decarboxylase domain containing protein, expressed	chr3	21683803	21686306	+	three_prime_UTR,promoter,downstream
3	LOC_Os06g33320	extra-large G-protein-related, putative, expressed	gene	extra-large G-protein-related, putative, expressed	chr6	19400019	19405763	+	CDS,three_prime_UTR
3	LOC_Os02g35480	expressed protein	gene	expressed protein	chr2	21319447	21324077	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g31110	expressed protein	gene	expressed protein	chr11	17640814	17647049	-	CDS
3	LOC_Os02g47570	phosphatase, putative, expressed	gene	phosphatase, putative, expressed	chr2	29063571	29066255	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g48000	CorA-like magnesium transporter protein, putative, expressed	gene	CorA-like magnesium transporter protein, putative, expressed	chr3	27280906	27287559	+	CDS,three_prime_UTR
3	LOC_Os12g04740	OsDegp13 - Putative Deg protease homologue, expressed	gene	OsDegp13 - Putative Deg protease homologue, expressed	chr12	2011782	2015391	-	five_prime_UTR,CDS,downstream
3	LOC_Os12g10670	AAA-type ATPase family protein, putative, expressed	gene	AAA-type ATPase family protein, putative, expressed	chr12	5702034	5707190	-	CDS,promoter
3	LOC_Os01g08700	GIGANTEA, putative, expressed	gene	GIGANTEA, putative, expressed	chr1	4328152	4337486	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g57790	ubiquinone biosynthesis protein COQ4, putative, expressed	gene	ubiquinone biosynthesis protein COQ4, putative, expressed	chr4	34228335	34230538	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os09g12530	glycosyl transferase, group 1 domain containing protein, expressed	gene	glycosyl transferase, group 1 domain containing protein, expressed	chr9	7178963	7180868	+	three_prime_UTR,downstream
3	LOC_Os02g05686	expressed protein	gene	expressed protein	chr2	2786757	2789073	+	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os06g25500	hypothetical protein	gene	hypothetical protein	chr6	14896117	14912395	-	three_prime_UTR
3	LOC_Os08g10780	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr8	6333294	6338672	+	CDS,three_prime_UTR
3	LOC_Os07g39560	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr7	23703161	23707935	+	CDS,three_prime_UTR
3	LOC_Os08g14570	NADPH reductase, putative, expressed	gene	NADPH reductase, putative, expressed	chr8	8759077	8764212	+	CDS
3	LOC_Os02g21970	26S protease regulatory subunit 6B, putative, expressed	gene	26S protease regulatory subunit 6B, putative, expressed	chr2	13059098	13063964	+	CDS,three_prime_UTR
3	LOC_Os01g09420	expressed protein	gene	expressed protein	chr1	4795155	4797479	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g23790	expressed protein	gene	expressed protein	chr11	12996849	13003130	-	CDS,three_prime_UTR
3	LOC_Os02g32370	inositol hexaphosphate kinase, putative, expressed	gene	inositol hexaphosphate kinase, putative, expressed	chr2	19116035	19119974	+	three_prime_UTR,downstream
3	LOC_Os03g26630	SAP domain containing protein, expressed	gene	SAP domain containing protein, expressed	chr3	15212844	15217717	-	CDS,three_prime_UTR
3	LOC_Os07g43890	emp24/gp25L/p24 family protein, putative, expressed	gene	emp24/gp25L/p24 family protein, putative, expressed	chr7	26241466	26244144	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g15000	lipase, putative, expressed	gene	lipase, putative, expressed	chr1	8403247	8407377	+	CDS
3	LOC_Os12g40279	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr12	24891645	24916694	+	CDS,downstream
3	LOC_Os08g38720	cytochrome c oxidase assembly protein COX15, putative, expressed	gene	cytochrome c oxidase assembly protein COX15, putative, expressed	chr8	24479638	24483344	+	CDS,three_prime_UTR
3	LOC_Os07g38240	ZOS7-05 - C2H2 zinc finger protein, expressed	gene	ZOS7-05 - C2H2 zinc finger protein, expressed	chr7	22929770	22932290	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g47590	niemann-Pick C1 protein precursor, putative, expressed	gene	niemann-Pick C1 protein precursor, putative, expressed	chr4	28039361	28055686	-	CDS,three_prime_UTR
3	LOC_Os05g48600	glycosyltransferase family 43 protein, putative, expressed	gene	glycosyltransferase family 43 protein, putative, expressed	chr5	27797932	27802412	+	CDS,three_prime_UTR
3	LOC_Os01g66890	BTBZ1 - Bric-a-Brac, Tramtrack, and Broad Complex BTB domain with TAZ zinc finger and Calmodulin-binding domains, expressed	gene	BTBZ1 - Bric-a-Brac, Tramtrack, and Broad Complex BTB domain with TAZ zinc finger and Calmodulin-binding domains, expressed	chr1	38842682	38845493	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g36670	expressed protein	gene	expressed protein	chr1	20350479	20363409	-	three_prime_UTR,promoter
3	LOC_Os07g01904	expressed protein	gene	expressed protein	chr7	547480	553208	+	three_prime_UTR,five_prime_UTR,CDS,downstream
3	LOC_Os07g43350	expressed protein	gene	expressed protein	chr7	25944925	25949568	-	CDS,three_prime_UTR
3	LOC_Os04g55190	SPOC domain containing protein, putative, expressed	gene	SPOC domain containing protein, putative, expressed	chr4	32622756	32628041	-	CDS
3	LOC_Os06g51310	PAZ domain containing protein, putative, expressed	gene	PAZ domain containing protein, putative, expressed	chr6	31068078	31076483	+	CDS
3	LOC_Os06g51430	signal peptide peptidase-like 2B, putative, expressed	gene	signal peptide peptidase-like 2B, putative, expressed	chr6	31150347	31155636	+	CDS,promoter
3	LOC_Os05g34760	expressed protein	gene	expressed protein	chr5	20558362	20565806	+	CDS,three_prime_UTR
3	LOC_Os02g18320	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	gene	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	chr2	10634658	10641096	+	CDS
3	LOC_Os01g71280	glycerol-3-phosphate dehydrogenase, putative, expressed	gene	glycerol-3-phosphate dehydrogenase, putative, expressed	chr1	41244527	41248884	+	CDS,three_prime_UTR
3	LOC_Os04g14190	TRAF-type zinc finger family protein, expressed	gene	TRAF-type zinc finger family protein, expressed	chr4	7942842	7945050	+	five_prime_UTR,CDS
3	LOC_Os01g11120	CID11, putative, expressed	gene	CID11, putative, expressed	chr1	5933573	5938527	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g44360	oligosaccharyl transferase, putative, expressed	gene	oligosaccharyl transferase, putative, expressed	chr5	25748605	25754597	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g07190	RNA polymerase Rpb7, N-terminal domain containing protein, expressed	gene	RNA polymerase Rpb7, N-terminal domain containing protein, expressed	chr6	3439105	3442077	+	CDS,three_prime_UTR
3	LOC_Os10g27090	expressed protein	gene	expressed protein	chr10	14207497	14212080	+	three_prime_UTR
3	LOC_Os09g32532	60S ribosomal protein L32, putative, expressed	gene	60S ribosomal protein L32, putative, expressed	chr9	19418500	19420674	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g37120	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr1	20715989	20721209	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g26560	expressed protein	gene	expressed protein	chr9	16077755	16083153	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g34870	hypothetical protein	gene	hypothetical protein	chr8	21940631	21941783	-	CDS,downstream
3	LOC_Os09g19910	expressed protein	gene	expressed protein	chr9	11912653	11915295	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g37340	cystathionine gamma-synthase, putative, expressed	gene	cystathionine gamma-synthase, putative, expressed	chr10	19929290	19933098	-	three_prime_UTR,promoter
3	LOC_Os12g28250	disease resistance protein RPM1, putative, expressed	gene	disease resistance protein RPM1, putative, expressed	chr12	16680936	16685599	-	CDS,promoter
3	LOC_Os09g37270	ATROPGEF7/ROPGEF7, putative, expressed	gene	ATROPGEF7/ROPGEF7, putative, expressed	chr9	21525469	21529385	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g50208	phosphoenolpyruvate carboxykinase, putative, expressed	gene	phosphoenolpyruvate carboxykinase, putative, expressed	chr4	29784101	29787563	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g11360	leucine rich repeat containing protein, expressed	gene	leucine rich repeat containing protein, expressed	chr3	5852906	5856465	+	CDS,three_prime_UTR
3	LOC_Os03g57270	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	gene	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	chr3	32655126	32656682	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g02060	mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	gene	mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	chr5	600302	603321	+	CDS,three_prime_UTR,promoter
3	LOC_Os07g46700	zinc finger, RING-type, putative, expressed	gene	zinc finger, RING-type, putative, expressed	chr7	27914328	27920199	-	CDS,three_prime_UTR,downstream
3	LOC_Os06g09830	cupin superfamily protein, putative, expressed	gene	cupin superfamily protein, putative, expressed	chr6	5004410	5007059	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g58070	aspartic proteinase nepenthesin precursor, putative, expressed	gene	aspartic proteinase nepenthesin precursor, putative, expressed	chr4	34401258	34403124	-	three_prime_UTR,promoter
3	LOC_Os12g21784	expressed protein	gene	expressed protein	chr12	12255770	12259405	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os07g38120	CAMK_CAMK_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr7	22857602	22861589	-	CDS,three_prime_UTR
3	LOC_Os02g42600	double-stranded RNA binding motif containing protein, expressed	gene	double-stranded RNA binding motif containing protein, expressed	chr2	25620879	25630203	+	CDS,promoter
3	LOC_Os08g43480	zinc finger, C3HC4 type family protein, expressed	gene	zinc finger, C3HC4 type family protein, expressed	chr8	27499575	27502258	+	CDS,promoter
3	LOC_Os11g38580	NBS-LRR type disease resistance protein, putative, expressed	gene	NBS-LRR type disease resistance protein, putative, expressed	chr11	22396318	22401139	+	CDS,downstream
3	LOC_Os03g39910	XH domain containing protein, expressed	gene	XH domain containing protein, expressed	chr3	22182706	22186450	-	five_prime_UTR,CDS
3	LOC_Os08g19370	expressed protein	gene	expressed protein	chr8	11582457	11586234	-	CDS,three_prime_UTR
3	LOC_Os06g42790	hydrolase, NUDIX family, domain containing protein, expressed	gene	hydrolase, NUDIX family, domain containing protein, expressed	chr6	25717154	25721195	-	CDS
3	LOC_Os06g40750	expressed protein	gene	expressed protein	chr6	24292281	24294707	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os11g29110	Leucine Rich Repeat family protein, expressed	gene	Leucine Rich Repeat family protein, expressed	chr11	16395114	16399095	+	CDS,downstream
3	LOC_Os09g12660	glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed	gene	glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed	chr9	7244359	7248816	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g45580	expressed protein	gene	expressed protein	chr5	26351001	26353724	-	three_prime_UTR
3	LOC_Os04g30210	OsFBL15 - F-box domain and LRR containing protein, expressed	gene	OsFBL15 - F-box domain and LRR containing protein, expressed	chr4	17855729	17858536	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os07g32761	hypothetical protein	gene	hypothetical protein	chr7	19592349	19594226	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os06g41384	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	gene	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	chr6	24807760	24810963	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g30934	UDP-N-acetylglucosamine transferase subunit ALG14, putative, expressed	gene	UDP-N-acetylglucosamine transferase subunit ALG14, putative, expressed	chr3	17615013	17621125	-	CDS,three_prime_UTR
3	LOC_Os03g12590	coatomer subunit gamma-1, putative, expressed	gene	coatomer subunit gamma-1, putative, expressed	chr3	6675289	6682848	+	CDS
3	LOC_Os01g51330	expressed protein	gene	expressed protein	chr1	29520032	29522231	-	CDS,three_prime_UTR
3	LOC_Os01g03090	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr1	1182394	1185707	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g50360	anaphase-promoting complex subunit 10, putative, expressed	gene	anaphase-promoting complex subunit 10, putative, expressed	chr5	28792160	28795173	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g02120	pectinacetylesterase domain containing protein, expressed	gene	pectinacetylesterase domain containing protein, expressed	chr5	633689	638855	+	CDS,downstream
3	LOC_Os09g25314	cytochrome c oxidase copper chaperone, putative, expressed	gene	cytochrome c oxidase copper chaperone, putative, expressed	chr9	15155994	15158085	+	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g47610	thiamine biosynthesis protein thiC, putative, expressed	gene	thiamine biosynthesis protein thiC, putative, expressed	chr3	26945101	26952253	+	CDS,three_prime_UTR
3	LOC_Os08g06200	stomatin-like protein 2, putative, expressed	gene	stomatin-like protein 2, putative, expressed	chr8	3419572	3423755	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g34670	prefoldin, putative, expressed	gene	prefoldin, putative, expressed	chr10	18403580	18413435	+	CDS,three_prime_UTR,promoter
3	LOC_Os05g18280	kelch domain containing protein, putative	gene	kelch domain containing protein, putative	chr5	10526783	10534223	-	CDS,promoter
3	LOC_Os09g36820	MCM10 - Putative minichromosome maintenance MCM protein 10, expressed	gene	MCM10 - Putative minichromosome maintenance MCM protein 10, expressed	chr9	21239269	21242101	+	CDS,downstream
3	LOC_Os01g53720	expressed protein	gene	expressed protein	chr1	30877956	30885294	+	CDS
3	LOC_Os11g19250	AARP2CN domain containing protein, expressed	gene	AARP2CN domain containing protein, expressed	chr11	11007324	11017615	+	CDS,three_prime_UTR
3	LOC_Os03g55560	STE_MEKK_ste11_MAP3K.15 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	gene	STE_MEKK_ste11_MAP3K.15 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	chr3	31605282	31612424	-	CDS
3	LOC_Os09g29830	helix-loop-helix DNA-binding domain containing protein, expressed	gene	helix-loop-helix DNA-binding domain containing protein, expressed	chr9	18140108	18143523	+	CDS,five_prime_UTR,promoter
3	LOC_Os10g02930	helicase SEN1, putative, expressed	gene	helicase SEN1, putative, expressed	chr10	1191776	1193836	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g02780	amidase family protein, putative, expressed	gene	amidase family protein, putative, expressed	chr4	1068952	1072006	+	CDS,three_prime_UTR
3	LOC_Os06g19444	CCT/B-box zinc finger protein, putative, expressed	gene	CCT/B-box zinc finger protein, putative, expressed	chr6	11069109	11075722	-	CDS,three_prime_UTR
3	LOC_Os02g40490	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	24554307	24557377	+	CDS,downstream
3	LOC_Os12g37920	unc-93 homolog A, putative	gene	unc-93 homolog A, putative	chr12	23269146	23272653	-	CDS
3	LOC_Os05g24970	LSM domain containing protein, expressed	gene	LSM domain containing protein, expressed	chr5	14392046	14394854	-	CDS,three_prime_UTR
3	LOC_Os10g35670	zinc finger, RING-type, putative, expressed	gene	zinc finger, RING-type, putative, expressed	chr10	19007217	19010162	+	three_prime_UTR,downstream
3	LOC_Os06g43930	OsProCP2 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed	gene	OsProCP2 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed	chr6	26455230	26460809	-	CDS,three_prime_UTR
3	LOC_Os09g25310	26S proteasome non-ATPase regulatory subunit 9, putative, expressed	gene	26S proteasome non-ATPase regulatory subunit 9, putative, expressed	chr9	15152761	15156001	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g65530	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr1	38030455	38034513	+	CDS
3	LOC_Os01g11580	bromodomain containing protein, expressed	gene	bromodomain containing protein, expressed	chr1	6246411	6252398	+	three_prime_UTR
3	LOC_Os12g32290	expressed protein	gene	expressed protein	chr12	19466661	19467473	-	five_prime_UTR,CDS,downstream
3	LOC_Os10g33690	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr10	17695637	17700804	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g06110	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr8	3364733	3372437	+	CDS,three_prime_UTR
3	LOC_Os03g01600	aminotransferase domain containing protein, putative, expressed	gene	aminotransferase domain containing protein, putative, expressed	chr3	374274	379044	-	CDS,three_prime_UTR
3	LOC_Os05g41590	glycerol-3-phosphate dehydrogenase, putative, expressed	gene	glycerol-3-phosphate dehydrogenase, putative, expressed	chr5	24295329	24298611	+	CDS,three_prime_UTR
3	LOC_Os02g30310	ThiF family domain containing protein, putative, expressed	gene	ThiF family domain containing protein, putative, expressed	chr2	18033211	18044014	+	CDS,three_prime_UTR
3	LOC_Os12g27070	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr12	15845914	15848854	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g11480	expressed protein	gene	expressed protein	chr3	5940787	5943063	+	three_prime_UTR,downstream
3	LOC_Os07g11010	protein Kinase-associated protein phosphatase, putative, expressed	gene	protein Kinase-associated protein phosphatase, putative, expressed	chr7	6050252	6059516	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g45090	expressed protein	gene	expressed protein	chr2	27346200	27351144	-	three_prime_UTR,CDS,promoter
3	LOC_Os12g40560	KH domain containing protein, putative, expressed	gene	KH domain containing protein, putative, expressed	chr12	25058216	25065293	+	CDS
3	LOC_Os05g14550	Phosphatidylinositol kinase and FAT containing domain protein, putative, expressed	gene	Phosphatidylinositol kinase and FAT containing domain protein, putative, expressed	chr5	8276900	8290913	+	CDS
3	LOC_Os02g40180	receptor-like protein kinase 5 precursor, putative, expressed	gene	receptor-like protein kinase 5 precursor, putative, expressed	chr2	24309891	24312994	+	CDS
3	LOC_Os06g06900	helix-loop-helix DNA-binding domain containing protein, expressed	gene	helix-loop-helix DNA-binding domain containing protein, expressed	chr6	3272374	3275891	+	CDS,three_prime_UTR
3	LOC_Os02g57924	expressed protein	gene	expressed protein	chr2	35454794	35456238	-	five_prime_UTR,CDS,downstream
3	LOC_Os12g40860	Leucine Rich Repeat family protein, expressed	gene	Leucine Rich Repeat family protein, expressed	chr12	25264464	25269052	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g51890	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr2	31775456	31782023	+	three_prime_UTR,CDS
3	LOC_Os10g38030	per1-like family protein, putative, expressed	gene	per1-like family protein, putative, expressed	chr10	20293802	20296767	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g19970	CAS1 domain-containing protein 1 precursor, putative, expressed	gene	CAS1 domain-containing protein 1 precursor, putative, expressed	chr3	11240975	11246198	-	CDS,promoter
3	LOC_Os03g11470	DEAD/DEAH box helicase domain containing protein, expressed	gene	DEAD/DEAH box helicase domain containing protein, expressed	chr3	5918915	5930373	-	CDS,three_prime_UTR
3	LOC_Os07g48720	MAG2, putative, expressed	gene	MAG2, putative, expressed	chr7	29173000	29177478	+	CDS
3	LOC_Os07g47090	KIP1, putative, expressed	gene	KIP1, putative, expressed	chr7	28145506	28148608	-	CDS
3	LOC_Os11g39350	expressed protein	gene	expressed protein	chr11	22955587	22960560	-	five_prime_UTR,CDS
3	LOC_Os03g08630	NAD-dependent epimerase/dehydratase, putative, expressed	gene	NAD-dependent epimerase/dehydratase, putative, expressed	chr3	4443017	4445474	+	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os10g32540	SAP domain containing protein, expressed	gene	SAP domain containing protein, expressed	chr10	16968814	16976405	+	CDS
3	LOC_Os06g04880	serine threonine kinase, putative, expressed	gene	serine threonine kinase, putative, expressed	chr6	2139039	2145620	-	CDS,three_prime_UTR
3	LOC_Os01g03110	expressed protein	gene	expressed protein	chr1	1197687	1202506	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g03910	hydrolase, NUDIX family, domain containing protein, expressed	gene	hydrolase, NUDIX family, domain containing protein, expressed	chr6	1573485	1576177	-	CDS
3	LOC_Os02g02740	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr2	1036857	1039710	-	three_prime_UTR
3	LOC_Os03g57170	cell cycle control protein, putative, expressed	gene	cell cycle control protein, putative, expressed	chr3	32592062	32595455	+	CDS,three_prime_UTR
3	LOC_Os08g30820	cleavage and polyadenylation specificity factor subunit 5, putative, expressed	gene	cleavage and polyadenylation specificity factor subunit 5, putative, expressed	chr8	19028422	19030594	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g13190	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr3	7109942	7114126	-	CDS
3	LOC_Os02g40860	CK1_CaseinKinase_1.5 - CK1 includes the casein kinase 1 kinases, expressed	gene	CK1_CaseinKinase_1.5 - CK1 includes the casein kinase 1 kinases, expressed	chr2	24760938	24766881	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g29380	MCM2 - Putative minichromosome maintenance MCM complex subunit 2, expressed	gene	MCM2 - Putative minichromosome maintenance MCM complex subunit 2, expressed	chr11	16580800	16586767	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g07310	transporter-related, putative, expressed	gene	transporter-related, putative, expressed	chr1	3445936	3449222	-	CDS,three_prime_UTR
3	LOC_Os02g20640	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr2	12161799	12163679	-	CDS
3	LOC_Os07g06550	expressed protein	gene	expressed protein	chr7	3182274	3186278	-	CDS,three_prime_UTR
3	LOC_Os10g35070	alpha-galactosidase precursor, putative, expressed	gene	alpha-galactosidase precursor, putative, expressed	chr10	18636316	18640121	+	CDS
3	LOC_Os07g18930	expressed protein	gene	expressed protein	chr7	11217027	11220336	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g41460	expressed protein	gene	expressed protein	chr8	26171300	26182431	+	CDS,three_prime_UTR
3	LOC_Os05g43550	Eukaryotic aspartyl protease domain containing protein	gene	Eukaryotic aspartyl protease domain containing protein	chr5	25254465	25255763	+	CDS,promoter
3	LOC_Os02g51590	phosphoglycerate mutase, putative, expressed	gene	phosphoglycerate mutase, putative, expressed	chr2	31591755	31594771	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g34220	vrga1, putative, expressed	gene	vrga1, putative, expressed	chr5	20196134	20199947	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g49220	GTP-binding protein, putative, expressed	gene	GTP-binding protein, putative, expressed	chr5	28179359	28182127	-	CDS,three_prime_UTR
3	LOC_Os05g43840	CAMK_KIN1/SNF1/Nim1_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_KIN1/SNF1/Nim1_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr5	25426736	25429024	+	three_prime_UTR,downstream
3	LOC_Os12g06520	bZIP transcription factor domain containing protein, expressed	gene	bZIP transcription factor domain containing protein, expressed	chr12	3152018	3155798	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g70490	potassium transporter, putative, expressed	gene	potassium transporter, putative, expressed	chr1	40824638	40829258	+	five_prime_UTR,CDS,promoter
3	LOC_Os11g47370	expressed protein	gene	expressed protein	chr11	27973482	27976937	+	three_prime_UTR
3	LOC_Os12g07230	CAMK_CAMK_like.45 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.45 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr12	3552395	3557399	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g06160	BTBP1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with pentapeptide repeats, expressed	gene	BTBP1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with pentapeptide repeats, expressed	chr3	3090853	3094659	+	CDS,three_prime_UTR
3	LOC_Os03g37260	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr3	20648763	20651804	+	three_prime_UTR,downstream
3	LOC_Os08g37600	citrate transporter, putative, expressed	gene	citrate transporter, putative, expressed	chr8	23817506	23822419	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g02530	glutathione S-transferase, N-terminal domain containing protein, expressed	gene	glutathione S-transferase, N-terminal domain containing protein, expressed	chr5	876932	880610	-	CDS,three_prime_UTR
3	LOC_Os12g42120	PPR repeat containing protein	gene	PPR repeat containing protein	chr12	26084259	26086439	+	CDS,downstream
3	LOC_Os11g07450	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr11	3745176	3751103	+	CDS
3	LOC_Os12g24550	expressed protein	gene	expressed protein	chr12	14024035	14034695	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g23040	transposon protein, putative, Mutator sub-class	gene	transposon protein, putative, Mutator sub-class	chr12	13019266	13027074	+	CDS
3	LOC_Os04g38750	plastid-specific 30S ribosomal protein 3, chloroplast precursor, putative, expressed	gene	plastid-specific 30S ribosomal protein 3, chloroplast precursor, putative, expressed	chr4	22842231	22843975	+	CDS,three_prime_UTR
3	LOC_Os07g09060	aldehyde dehydrogenase, putative, expressed	gene	aldehyde dehydrogenase, putative, expressed	chr7	4733627	4740455	+	CDS,three_prime_UTR
3	LOC_Os03g21664	expressed protein	gene	expressed protein	chr3	12364759	12366217	-	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os01g56880	purple acid phosphatase precursor, putative, expressed	gene	purple acid phosphatase precursor, putative, expressed	chr1	32847192	32851566	-	CDS
3	LOC_Os04g56309	expressed protein	gene	expressed protein	chr4	33384628	33388560	-	three_prime_UTR,promoter,downstream
3	LOC_Os11g46070	MLA10, putative, expressed	gene	MLA10, putative, expressed	chr11	27412979	27419322	+	CDS,three_prime_UTR
3	LOC_Os01g37800	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr1	21142348	21145394	-	CDS,promoter
3	LOC_Os06g05890	B-box zinc finger family protein, putative, expressed	gene	B-box zinc finger family protein, putative, expressed	chr6	2694461	2698504	+	CDS,three_prime_UTR
3	LOC_Os06g47210	oligopeptidase, putative, expressed	gene	oligopeptidase, putative, expressed	chr6	28619995	28627008	+	CDS,three_prime_UTR,promoter
3	LOC_Os06g49080	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	gene	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	chr6	29737882	29741505	+	CDS,three_prime_UTR,promoter
3	LOC_Os05g01994	rab5-interacting protein like, putative, expressed	gene	rab5-interacting protein like, putative, expressed	chr5	566502	568229	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os09g29970	TMV-MP30 binding protein 2C, putative, expressed	gene	TMV-MP30 binding protein 2C, putative, expressed	chr9	18236699	18239535	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g22550	transducin family protein, putative, expressed	gene	transducin family protein, putative, expressed	chr6	13100545	13111982	-	CDS,three_prime_UTR
3	LOC_Os02g27480	membrane attack complex component/perforin/complement C9, putative, expressed	gene	membrane attack complex component/perforin/complement C9, putative, expressed	chr2	16253680	16258619	+	CDS,three_prime_UTR
3	LOC_Os06g09850	25.3 kDa vesicle transport protein, putative, expressed	gene	25.3 kDa vesicle transport protein, putative, expressed	chr6	5011362	5015658	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g45320	ubiquitin domain-containing protein 1, putative, expressed	gene	ubiquitin domain-containing protein 1, putative, expressed	chr5	26229716	26232146	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g38570	multidrug resistance protein, putative, expressed	gene	multidrug resistance protein, putative, expressed	chr4	22729632	22736206	-	CDS
3	LOC_Os11g42000	FRA10AC1, putative, expressed	gene	FRA10AC1, putative, expressed	chr11	24791724	24796413	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g32280	acetyltransferase, GNAT family, putative, expressed	gene	acetyltransferase, GNAT family, putative, expressed	chr11	18609967	18613000	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g11140	pyridine nucleotide-disulphide oxidoreductase domain containing protein, expressed	gene	pyridine nucleotide-disulphide oxidoreductase domain containing protein, expressed	chr6	5839076	5843551	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g44800	expressed protein	gene	expressed protein	chr4	26339131	26343252	-	CDS,three_prime_UTR,downstream
3	LOC_Os10g32960	peroxisome assembly protein 12, putative, expressed	gene	peroxisome assembly protein 12, putative, expressed	chr10	17179539	17184438	+	CDS
3	LOC_Os07g36780	S-domain receptor-like protein kinase, putative, expressed	gene	S-domain receptor-like protein kinase, putative, expressed	chr7	22035915	22038731	-	three_prime_UTR,promoter
3	LOC_Os03g18410	DNA-directed RNA polymerase subunit, putative, expressed	gene	DNA-directed RNA polymerase subunit, putative, expressed	chr3	10319138	10323773	-	CDS,three_prime_UTR
3	LOC_Os03g01360	expressed protein	gene	expressed protein	chr3	267599	276405	+	three_prime_UTR,downstream
3	LOC_Os07g30800	immunophilin, putative, expressed	gene	immunophilin, putative, expressed	chr7	18227567	18231371	+	three_prime_UTR,downstream
3	LOC_Os02g21630	SEC14 cytosolic factor family protein, putative, expressed	gene	SEC14 cytosolic factor family protein, putative, expressed	chr2	12846467	12851439	+	CDS,three_prime_UTR
3	LOC_Os07g22950	adenylate kinase isoenzyme 6, putative, expressed	gene	adenylate kinase isoenzyme 6, putative, expressed	chr7	12925455	12929718	+	CDS,three_prime_UTR
3	LOC_Os04g42990	suppressor of stem-loop protein 1, putative, expressed	gene	suppressor of stem-loop protein 1, putative, expressed	chr4	25250147	25253800	-	CDS,three_prime_UTR
3	LOC_Os09g14680	expressed protein	gene	expressed protein	chr9	8709148	8715891	-	CDS
3	LOC_Os04g33750	ribosomal protein, putative, expressed	gene	ribosomal protein, putative, expressed	chr4	20260404	20263822	-	CDS,three_prime_UTR
3	LOC_Os06g30820	expressed protein	gene	expressed protein	chr6	17870087	17873269	-	three_prime_UTR
3	LOC_Os02g30210	OsFBK7 - F-box domain and kelch repeat containing protein, expressed	gene	OsFBK7 - F-box domain and kelch repeat containing protein, expressed	chr2	17952627	17955854	-	three_prime_UTR
3	LOC_Os09g07360	frigida, putative, expressed	gene	frigida, putative, expressed	chr9	3655769	3664430	-	CDS,three_prime_UTR
3	LOC_Os09g19750	expressed protein	gene	expressed protein	chr9	11817397	11820424	-	CDS,three_prime_UTR
3	LOC_Os11g02710	retrotransposon protein, putative, Ty1-copia subclass, expressed	gene	retrotransposon protein, putative, Ty1-copia subclass, expressed	chr11	875097	878247	+	CDS
3	LOC_Os09g27080	growth regulator related protein, putative, expressed	gene	growth regulator related protein, putative, expressed	chr9	16475942	16480748	+	CDS,three_prime_UTR
3	LOC_Os08g29780	expressed protein	gene	expressed protein	chr8	18306113	18309429	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g43090	bZIP family transcription factor, putative, expressed	gene	bZIP family transcription factor, putative, expressed	chr8	27234570	27238733	+	CDS,three_prime_UTR
3	LOC_Os01g52304	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr1	30061671	30065301	+	five_prime_UTR,CDS
3	LOC_Os10g42950	cyclin-dependent kinase E-1, putative, expressed	gene	cyclin-dependent kinase E-1, putative, expressed	chr10	23077202	23081732	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g04470	expressed protein	gene	expressed protein	chr6	1913142	1917056	-	CDS,three_prime_UTR
3	LOC_Os09g04440	DNA-binding protein, putative, expressed	gene	DNA-binding protein, putative, expressed	chr9	2353824	2361285	-	CDS,three_prime_UTR
3	LOC_Os01g66640	S-domain receptor-like protein kinase, putative	gene	S-domain receptor-like protein kinase, putative	chr1	38703658	38706430	+	CDS,promoter
3	LOC_Os05g49250	hhH-GPD superfamily base excision DNA repair protein, putative, expressed	gene	hhH-GPD superfamily base excision DNA repair protein, putative, expressed	chr5	28188668	28194113	-	three_prime_UTR,promoter
3	LOC_Os04g39220	expressed protein	gene	expressed protein	chr4	23133221	23141636	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g03650	sufB/sufD domain containing protein, putative, expressed	gene	sufB/sufD domain containing protein, putative, expressed	chr1	1502993	1507057	-	CDS,three_prime_UTR
3	LOC_Os06g14550	signal recognition particle 9 kDa protein, putative, expressed	gene	signal recognition particle 9 kDa protein, putative, expressed	chr6	8193484	8197053	-	CDS
3	LOC_Os05g48500	expressed protein	gene	expressed protein	chr5	27730799	27735738	+	CDS
3	LOC_Os07g38930	glucan endo-1,3-beta-glucosidase precursor, putative, expressed	gene	glucan endo-1,3-beta-glucosidase precursor, putative, expressed	chr7	23343096	23347865	+	CDS,three_prime_UTR
3	LOC_Os03g14380	autophagy protein 9, putative, expressed	gene	autophagy protein 9, putative, expressed	chr3	7818836	7826359	-	CDS
3	LOC_Os01g68860	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	gene	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	chr1	40005024	40009898	-	CDS
3	LOC_Os05g04340	CGMC_GSK.6 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	gene	CGMC_GSK.6 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	chr5	1974008	1977856	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g31230	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr3	17779196	17782933	+	three_prime_UTR
3	LOC_Os02g29480	RNA-binding protein-like, putative, expressed	gene	RNA-binding protein-like, putative, expressed	chr2	17504445	17509864	-	CDS,three_prime_UTR
3	LOC_Os06g10560	leaf senescence related protein, putative, expressed	gene	leaf senescence related protein, putative, expressed	chr6	5448105	5452125	+	CDS,three_prime_UTR
3	LOC_Os02g01100	transmembrane amino acid transporter protein, putative, expressed	gene	transmembrane amino acid transporter protein, putative, expressed	chr2	50256	55886	-	CDS,three_prime_UTR
3	LOC_Os05g48970	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr5	28022475	28029783	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g16410	oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed	gene	oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed	chr11	9068391	9073491	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g47590	expressed protein	gene	expressed protein	chr7	28451730	28455577	-	CDS,three_prime_UTR
3	LOC_Os03g17340	expressed protein	gene	expressed protein	chr3	9645686	9650623	-	CDS,three_prime_UTR
3	LOC_Os03g50880	class I glutamine amidotransferase, putative, expressed	gene	class I glutamine amidotransferase, putative, expressed	chr3	29060799	29064604	-	CDS,promoter
3	LOC_Os10g07538	expressed protein	gene	expressed protein	chr10	4033651	4037058	-	CDS
3	LOC_Os01g05105	expressed protein	gene	expressed protein	chr1	2392480	2397292	+	five_prime_UTR,promoter
3	LOC_Os01g52390	plasminogen activator inhibitor 1 RNA-binding protein, putative, expressed	gene	plasminogen activator inhibitor 1 RNA-binding protein, putative, expressed	chr1	30094375	30097752	-	CDS,three_prime_UTR
3	LOC_Os02g07240	expressed protein	gene	expressed protein	chr2	3718306	3720152	-	CDS,three_prime_UTR,downstream
3	LOC_Os06g22330	expressed protein	gene	expressed protein	chr6	12961818	12965526	+	CDS,three_prime_UTR
3	LOC_Os09g38540	plastocyanin-like domain containing protein, putative, expressed	gene	plastocyanin-like domain containing protein, putative, expressed	chr9	22172359	22173921	+	three_prime_UTR,promoter,downstream
3	LOC_Os08g12820	proteasome/cyclosome repeat containing protein, expressed	gene	proteasome/cyclosome repeat containing protein, expressed	chr8	7590562	7596019	+	CDS,three_prime_UTR
3	LOC_Os03g53050	WRKY transcription factor, putative, expressed	gene	WRKY transcription factor, putative, expressed	chr3	30415080	30418432	+	CDS,three_prime_UTR
3	LOC_Os06g02130	G-protein alpha subunit, putative, expressed	gene	G-protein alpha subunit, putative, expressed	chr6	633143	639480	-	CDS,three_prime_UTR
3	LOC_Os11g46250	expressed protein	gene	expressed protein	chr11	27533882	27542156	+	CDS,promoter
3	LOC_Os06g01290	expressed protein	gene	expressed protein	chr6	181104	183623	+	three_prime_UTR
3	LOC_Os09g38690	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr9	22238918	22243013	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os06g40840	microtubule associated protein, putative, expressed	gene	microtubule associated protein, putative, expressed	chr6	24358243	24363077	+	CDS,three_prime_UTR
3	LOC_Os05g22930	CAAX amino terminal protease family protein, putative, expressed	gene	CAAX amino terminal protease family protein, putative, expressed	chr5	13000022	13003228	-	CDS
3	LOC_Os01g35850	Ras family domain containing protein	gene	Ras family domain containing protein	chr1	19850626	19853220	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g21660	L1P family of ribosomal proteins domain containing protein, expressed	gene	L1P family of ribosomal proteins domain containing protein, expressed	chr2	12869457	12872468	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g47670	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr5	27254769	27257911	+	CDS,three_prime_UTR
3	LOC_Os03g27340	expressed protein	gene	expressed protein	chr3	15657432	15660056	-	three_prime_UTR,promoter
3	LOC_Os08g44550	expressed protein	gene	expressed protein	chr8	28008344	28010604	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g49890	multidrug resistance-associated protein, putative, expressed	gene	multidrug resistance-associated protein, putative, expressed	chr4	29557179	29565106	+	CDS
3	LOC_Os03g59680	PAPA-1-like conserved region family protein, expressed	gene	PAPA-1-like conserved region family protein, expressed	chr3	33981086	33984964	-	CDS,three_prime_UTR
3	LOC_Os02g27060	high mobility group, putative, expressed	gene	high mobility group, putative, expressed	chr2	15904822	15909714	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g60180	GTPase of unknown function domain containing protein, putative, expressed	gene	GTPase of unknown function domain containing protein, putative, expressed	chr3	34220398	34225003	-	CDS,three_prime_UTR
3	LOC_Os01g50320	surp module family protein, putative, expressed	gene	surp module family protein, putative, expressed	chr1	28884364	28889897	+	CDS
3	LOC_Os06g02100	OsFBX181 - F-box domain containing protein, expressed	gene	OsFBX181 - F-box domain containing protein, expressed	chr6	622463	625096	-	CDS
3	LOC_Os01g12550	expressed protein	gene	expressed protein	chr1	6903506	6908594	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g03620	seven in absentia protein family domain containing protein, expressed	gene	seven in absentia protein family domain containing protein, expressed	chr2	1481233	1485113	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g13670	expressed protein	gene	expressed protein	chr12	7686375	7696616	-	CDS
3	LOC_Os08g19105	expressed protein	gene	expressed protein	chr8	11398716	11401867	-	three_prime_UTR
3	LOC_Os08g06020	MSP domain containing protein, expressed	gene	MSP domain containing protein, expressed	chr8	3284009	3288877	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g37500	expressed protein	gene	expressed protein	chr5	21880486	21897228	-	CDS,three_prime_UTR
3	LOC_Os02g21705	unknown	gene	unknown	chr2	12903022	12905510	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os11g40439	unknown	gene	unknown	chr11	23649440	23651118	-	CDS,promoter
3	LOC_Os07g10730	polygalacturonase, putative	gene	polygalacturonase, putative	chr7	5821835	5823008	+	CDS,promoter,downstream
3	LOC_Os03g25390	novel plant SNARE 11, putative, expressed	gene	novel plant SNARE 11, putative, expressed	chr3	14512384	14517236	-	CDS,three_prime_UTR
3	LOC_Os03g02010	DNA methyltransferase protein, putative, expressed	gene	DNA methyltransferase protein, putative, expressed	chr3	631632	635458	+	CDS
3	LOC_Os07g03240	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr7	1280379	1284075	+	three_prime_UTR
3	LOC_Os12g06810	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr12	3304192	3315497	-	CDS,three_prime_UTR
3	LOC_Os03g53770	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr3	30818070	30822157	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g31310	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr7	18535379	18540361	-	three_prime_UTR
3	LOC_Os01g67160	cyclin-dependent kinase B1-1, putative, expressed	gene	cyclin-dependent kinase B1-1, putative, expressed	chr1	38980259	38983035	-	CDS,three_prime_UTR
3	LOC_Os06g51520	lysine ketoglutarate reductase trans-splicing related 1, putative, expressed	gene	lysine ketoglutarate reductase trans-splicing related 1, putative, expressed	chr6	31211405	31216601	+	CDS,downstream
3	LOC_Os03g49420	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr3	28121731	28130190	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g02910	membrane related protein CP5, putative, expressed	gene	membrane related protein CP5, putative, expressed	chr4	1144348	1147769	-	CDS,three_prime_UTR
3	LOC_Os12g38310	mitochondrial import inner membrane translocase subunit Tim, putative, expressed	gene	mitochondrial import inner membrane translocase subunit Tim, putative, expressed	chr12	23483112	23484957	+	CDS,three_prime_UTR
3	LOC_Os09g31462	hypothetical protein	gene	hypothetical protein	chr9	18959794	18960195	-	CDS,promoter,downstream
3	LOC_Os12g04030	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr12	1674882	1681837	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g62522	hypothetical protein	gene	hypothetical protein	chr3	35396259	35398421	+	CDS,downstream
3	LOC_Os09g39590	metallo-beta-lactamase, putative, expressed	gene	metallo-beta-lactamase, putative, expressed	chr9	22719809	22727019	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g57210	actin-6, putative, expressed	gene	actin-6, putative, expressed	chr4	33898328	33902478	+	CDS,downstream
3	LOC_Os01g63910	AT hook motif family protein, expressed	gene	AT hook motif family protein, expressed	chr1	37079246	37087904	-	CDS,promoter
3	LOC_Os05g43770	NLI interacting factor-like phosphatase, putative, expressed	gene	NLI interacting factor-like phosphatase, putative, expressed	chr5	25384307	25389991	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g42490	sucrose synthase, putative, expressed	gene	sucrose synthase, putative, expressed	chr7	25428645	25434188	+	five_prime_UTR,CDS,promoter
3	LOC_Os09g32240	OsFBX332 - F-box domain containing protein, expressed	gene	OsFBX332 - F-box domain containing protein, expressed	chr9	19240592	19244076	-	CDS,three_prime_UTR
3	LOC_Os04g32590	transcription factor, putative, expressed	gene	transcription factor, putative, expressed	chr4	19441153	19443818	-	CDS,promoter
3	LOC_Os07g14270	calreticulin precursor protein, putative, expressed	gene	calreticulin precursor protein, putative, expressed	chr7	8135970	8140319	+	CDS,three_prime_UTR
3	LOC_Os02g01960	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr2	534930	538203	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g04890	expressed protein	gene	expressed protein	chr5	2351548	2354851	-	CDS,downstream
3	LOC_Os03g54890	ribosomal protein L13, putative, expressed	gene	ribosomal protein L13, putative, expressed	chr3	31196201	31198292	+	three_prime_UTR,downstream
3	LOC_Os10g34710	myosin-2 heavy chain, non muscle, putative, expressed	gene	myosin-2 heavy chain, non muscle, putative, expressed	chr10	18459629	18468400	+	CDS
3	LOC_Os01g45370	radical SAM enzyme, putative, expressed	gene	radical SAM enzyme, putative, expressed	chr1	25751178	25754739	-	CDS,three_prime_UTR
3	LOC_Os03g23030	aberrant pollen transmission 1, putative, expressed	gene	aberrant pollen transmission 1, putative, expressed	chr3	13292673	13308441	+	CDS,three_prime_UTR
3	LOC_Os01g01570	kinesin heavy chain, putative, expressed	gene	kinesin heavy chain, putative, expressed	chr1	287372	291296	+	five_prime_UTR,CDS
3	LOC_Os07g07230	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr7	3582173	3587395	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g38950	CGMC_MAPKCMGC_2_ERK.14 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	gene	CGMC_MAPKCMGC_2_ERK.14 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	chr10	20684568	20688500	+	CDS
3	LOC_Os01g47770	CS domain containing protein, putative, expressed	gene	CS domain containing protein, putative, expressed	chr1	27335216	27338319	+	CDS,three_prime_UTR
3	LOC_Os01g45439	expressed protein	gene	expressed protein	chr1	25776409	25781375	-	CDS
3	LOC_Os04g31090	expressed protein	gene	expressed protein	chr4	18416964	18423997	-	three_prime_UTR
3	LOC_Os10g21890	glycosyl transferase family 8, putative, expressed	gene	glycosyl transferase family 8, putative, expressed	chr10	11179697	11184409	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g39560	genetic modifier, putative, expressed	gene	genetic modifier, putative, expressed	chr9	22707142	22709078	+	three_prime_UTR,promoter,downstream
3	LOC_Os03g05660	appr-1-p processing enzyme family protein, putative, expressed	gene	appr-1-p processing enzyme family protein, putative, expressed	chr3	2821925	2827092	-	three_prime_UTR,promoter
3	LOC_Os12g12300	EDM2, putative, expressed	gene	EDM2, putative, expressed	chr12	6758950	6761923	-	CDS,three_prime_UTR
3	LOC_Os12g40880	phosphoribulokinase/Uridine kinase family protein, expressed	gene	phosphoribulokinase/Uridine kinase family protein, expressed	chr12	25272204	25276178	+	three_prime_UTR,CDS,downstream
3	LOC_Os02g28870	U-box domain-containing protein, putative, expressed	gene	U-box domain-containing protein, putative, expressed	chr2	17079515	17083056	+	CDS
3	LOC_Os02g24750	expressed protein	gene	expressed protein	chr2	14351273	14355991	-	CDS,promoter
3	LOC_Os07g46710	expressed protein	gene	expressed protein	chr7	27921249	27923665	-	CDS,three_prime_UTR
3	LOC_Os08g31690	OsFBX291 - F-box domain containing protein, expressed	gene	OsFBX291 - F-box domain containing protein, expressed	chr8	19641222	19642758	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g07850	tRNA methyltransferase, putative, expressed	gene	tRNA methyltransferase, putative, expressed	chr3	3989101	3996811	+	CDS
3	LOC_Os04g41700	expressed protein	gene	expressed protein	chr4	24534431	24537580	-	three_prime_UTR
3	LOC_Os08g01850	esterase, putative, expressed	gene	esterase, putative, expressed	chr8	518658	522877	-	CDS,three_prime_UTR
3	LOC_Os08g04770	AMP-binding domain containing protein, expressed	gene	AMP-binding domain containing protein, expressed	chr8	2381158	2384164	+	CDS,downstream
3	LOC_Os01g41930	leucine rich repeat protein, putative, expressed	gene	leucine rich repeat protein, putative, expressed	chr1	23774817	23778703	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os04g01300	OsRhmbd10 - Putative Rhomboid homologue, expressed	gene	OsRhmbd10 - Putative Rhomboid homologue, expressed	chr4	225838	229061	-	CDS,three_prime_UTR
3	LOC_Os08g24390	expressed protein	gene	expressed protein	chr8	14722203	14729357	-	CDS,three_prime_UTR
3	LOC_Os03g43910	expressed protein	gene	expressed protein	chr3	24636250	24639549	-	CDS
3	LOC_Os08g04620	MSP domain containing protein, putative, expressed	gene	MSP domain containing protein, putative, expressed	chr8	2304812	2307578	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g07030	arginyl-tRNA synthetase, putative, expressed	gene	arginyl-tRNA synthetase, putative, expressed	chr5	3689931	3697604	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g47780	60S ribosomal protein L18-3, putative, expressed	gene	60S ribosomal protein L18-3, putative, expressed	chr7	28536594	28539133	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g08020	hypothetical protein	gene	hypothetical protein	chr12	4073907	4074511	-	CDS,downstream
3	LOC_Os03g03949	electron carrier/ protein disulfide oxidoreductase, putative, expressed	gene	electron carrier/ protein disulfide oxidoreductase, putative, expressed	chr3	1803456	1812290	+	CDS,three_prime_UTR
3	LOC_Os05g01090	pex14, putative, expressed	gene	pex14, putative, expressed	chr5	91680	95793	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g29750	ZOS9-15 - C2H2 zinc finger protein, expressed	gene	ZOS9-15 - C2H2 zinc finger protein, expressed	chr9	18084523	18089863	-	CDS
3	LOC_Os02g04040	RecF/RecN/SMC N terminal domain containing protein, expressed	gene	RecF/RecN/SMC N terminal domain containing protein, expressed	chr2	1754546	1757790	-	CDS,three_prime_UTR
3	LOC_Os08g08360	expressed protein	gene	expressed protein	chr8	4816899	4819790	+	CDS,three_prime_UTR
3	LOC_Os04g42010	RNA binding protein, putative, expressed	gene	RNA binding protein, putative, expressed	chr4	24697637	24701572	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g29700	expressed protein	gene	expressed protein	chr11	16744495	16746677	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g10380	glycine-rich protein, putative, expressed	gene	glycine-rich protein, putative, expressed	chr4	5604181	5625718	+	CDS,three_prime_UTR
3	LOC_Os03g09920	RNase L inhibitor protein-related, putative, expressed	gene	RNase L inhibitor protein-related, putative, expressed	chr3	4940065	4944560	-	CDS,downstream
3	LOC_Os06g33980	tRNA-splicing endonuclease subunit Sen2, putative, expressed	gene	tRNA-splicing endonuclease subunit Sen2, putative, expressed	chr6	19782166	19784261	-	CDS,three_prime_UTR
3	LOC_Os03g15110	expressed protein	gene	expressed protein	chr3	8250082	8252354	-	three_prime_UTR,promoter
3	LOC_Os01g74280	TGD2, putative, expressed	gene	TGD2, putative, expressed	chr1	43038940	43042947	+	CDS,three_prime_UTR
3	LOC_Os07g43322	expressed protein	gene	expressed protein	chr7	25935867	25939385	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g06840	galactosyltransferase, putative, expressed	gene	galactosyltransferase, putative, expressed	chr2	3453297	3457586	+	CDS,three_prime_UTR
3	LOC_Os05g02490	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr5	851735	858051	+	CDS,downstream
3	LOC_Os02g10260	outer membrane protein, OMP85 family protein, expressed	gene	outer membrane protein, OMP85 family protein, expressed	chr2	5373056	5380164	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g47294	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr6	28662487	28666857	-	CDS
3	LOC_Os09g38310	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr9	22036476	22040207	-	CDS,three_prime_UTR,downstream
3	LOC_Os08g43800	carrier, putative	gene	carrier, putative	chr8	27650784	27651488	+	CDS,promoter,downstream
3	LOC_Os01g16040	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr1	9023897	9027876	-	CDS,three_prime_UTR
3	LOC_Os06g01410	glutamine cyclotransferase precursor, putative, expressed	gene	glutamine cyclotransferase precursor, putative, expressed	chr6	243855	246799	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g14830	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr7	8476408	8481674	+	CDS,three_prime_UTR
3	LOC_Os04g45460	cysteine-rich repeat secretory protein precursor, putative, expressed	gene	cysteine-rich repeat secretory protein precursor, putative, expressed	chr4	26715764	26719556	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g16670	BSD domain-containing protein, putative, expressed	gene	BSD domain-containing protein, putative, expressed	chr1	9453952	9455899	+	three_prime_UTR,downstream
3	LOC_Os09g04924	expressed protein	gene	expressed protein	chr9	2639763	2642481	-	three_prime_UTR
3	LOC_Os04g20930	conserved hypothetical protein	gene	conserved hypothetical protein	chr4	11737907	11738326	-	CDS,promoter
3	LOC_Os09g39620	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr9	22736078	22740681	+	CDS,downstream
3	LOC_Os01g32184	tetratricopeptide repeat protein 5, putative, expressed	gene	tetratricopeptide repeat protein 5, putative, expressed	chr1	17611281	17625929	-	CDS,three_prime_UTR
3	LOC_Os01g70130	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr1	40583928	40590259	-	CDS,three_prime_UTR
3	LOC_Os08g15840	ankyrin repeat-rich protein, putative, expressed	gene	ankyrin repeat-rich protein, putative, expressed	chr8	9627599	9632218	-	CDS
3	LOC_Os02g36770	galactosyltransferase family protein, putative, expressed	gene	galactosyltransferase family protein, putative, expressed	chr2	22168446	22172832	+	CDS
3	LOC_Os09g39034	expressed protein	gene	expressed protein	chr9	22404974	22413889	-	CDS,three_prime_UTR
3	LOC_Os11g04990	expressed protein	gene	expressed protein	chr11	2141080	2143972	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g34700	ZOS11-04 - C2H2 zinc finger protein, expressed	gene	ZOS11-04 - C2H2 zinc finger protein, expressed	chr11	19861153	19866059	+	CDS,downstream
3	LOC_Os05g48800	drought induced 19 protein, putative, expressed	gene	drought induced 19 protein, putative, expressed	chr5	27904917	27908444	-	CDS,three_prime_UTR
3	LOC_Os02g13110	serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed	gene	serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed	chr2	6963959	6971934	-	CDS
3	LOC_Os03g02640	methylthioribose kinase, putative, expressed	gene	methylthioribose kinase, putative, expressed	chr3	973602	977413	+	CDS
3	LOC_Os07g47650	OsFBK19 - F-box domain and kelch repeat containing protein, expressed	gene	OsFBK19 - F-box domain and kelch repeat containing protein, expressed	chr7	28475429	28478711	+	three_prime_UTR
3	LOC_Os03g06890	DUF593 domain containing protein	gene	DUF593 domain containing protein	chr3	3482349	3484704	-	CDS,promoter,downstream
3	LOC_Os04g42889	hypothetical protein	gene	hypothetical protein	chr4	25195129	25195737	-	CDS,promoter,downstream
3	LOC_Os05g25870	N-dimethylguanosine tRNA methyltransferase, putative, expressed	gene	N-dimethylguanosine tRNA methyltransferase, putative, expressed	chr5	14997250	14999014	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os02g38250	EMB1745, putative, expressed	gene	EMB1745, putative, expressed	chr2	23126159	23134470	-	CDS,three_prime_UTR
3	LOC_Os03g51264	hypothetical protein	gene	hypothetical protein	chr3	29319335	29319768	-	CDS,promoter
3	LOC_Os01g69130	dynamin family protein, putative, expressed	gene	dynamin family protein, putative, expressed	chr1	40181673	40189878	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g43360	MYST-like histone acetyltransferase 1, putative, expressed	gene	MYST-like histone acetyltransferase 1, putative, expressed	chr7	25957775	25962658	-	CDS
3	LOC_Os04g52330	expressed protein	gene	expressed protein	chr4	30910487	30912614	-	three_prime_UTR,downstream
3	LOC_Os04g53195	expressed protein	gene	expressed protein	chr4	31484485	31488631	-	CDS
3	LOC_Os11g41900	acyltransferase, putative, expressed	gene	acyltransferase, putative, expressed	chr11	24733671	24739878	-	CDS,three_prime_UTR
3	LOC_Os12g19530	ATP-binding region, ATPase-like domain-containing protein, putative, expressed	gene	ATP-binding region, ATPase-like domain-containing protein, putative, expressed	chr12	11347144	11354572	+	three_prime_UTR
3	LOC_Os12g01530	ferritin-1, chloroplast precursor, putative, expressed	gene	ferritin-1, chloroplast precursor, putative, expressed	chr12	319214	322923	-	CDS
3	LOC_Os06g44374	protein transport protein SEC61 subunit gamma, putative, expressed	gene	protein transport protein SEC61 subunit gamma, putative, expressed	chr6	26781835	26783853	-	three_prime_UTR,promoter,downstream
3	LOC_Os05g03000	inner membrane protein alx, putative, expressed	gene	inner membrane protein alx, putative, expressed	chr5	1126995	1132412	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g39590	spotted leaf 11, putative, expressed	gene	spotted leaf 11, putative, expressed	chr7	23720779	23723802	+	three_prime_UTR
3	LOC_Os02g11980	receptor-like protein kinase precursor, putative, expressed	gene	receptor-like protein kinase precursor, putative, expressed	chr2	6208684	6212210	-	CDS,downstream
3	LOC_Os10g08550	enolase, putative, expressed	gene	enolase, putative, expressed	chr10	4656228	4660848	-	CDS
3	LOC_Os01g12900	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr1	7163594	7166419	-	three_prime_UTR,CDS,promoter
3	LOC_Os06g45390	expressed protein	gene	expressed protein	chr6	27440355	27443897	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g38570	riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed	gene	riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed	chr5	22562569	22566471	-	CDS,downstream
3	LOC_Os04g56620	molybdopterin biosynthesis protein CNX1, putative, expressed	gene	molybdopterin biosynthesis protein CNX1, putative, expressed	chr4	33576258	33579456	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g25680	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr7	14722116	14730584	+	CDS,three_prime_UTR
3	LOC_Os09g12650	pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed	gene	pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed	chr9	7239238	7244003	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g46520	hydrolase, putative, expressed	gene	hydrolase, putative, expressed	chr2	28356954	28361066	+	CDS
3	LOC_Os01g57630	pentatricopeptide containing protein, putative, expressed	gene	pentatricopeptide containing protein, putative, expressed	chr1	33316991	33321866	+	three_prime_UTR
3	LOC_Os01g13460	helix-loop-helix DNA-binding domain containing protein, expressed	gene	helix-loop-helix DNA-binding domain containing protein, expressed	chr1	7494057	7497391	-	CDS,three_prime_UTR
3	LOC_Os03g07300	ribulose-phosphate 3-epimerase, chloroplast precursor, putative, expressed	gene	ribulose-phosphate 3-epimerase, chloroplast precursor, putative, expressed	chr3	3712487	3716954	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os08g41830	sulfite oxidase, putative, expressed	gene	sulfite oxidase, putative, expressed	chr8	26415029	26419984	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g23950	adapitin protein, putative, expressed	gene	adapitin protein, putative, expressed	chr3	13585459	13591809	-	CDS,three_prime_UTR
3	LOC_Os01g55870	chorismate mutase, chloroplast precursor, putative, expressed	gene	chorismate mutase, chloroplast precursor, putative, expressed	chr1	32170678	32173974	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g38630	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr5	22586733	22589966	-	CDS,three_prime_UTR
3	LOC_Os06g45510	thioredoxin, putative, expressed	gene	thioredoxin, putative, expressed	chr6	27529120	27531906	+	three_prime_UTR,CDS
3	LOC_Os08g05530	LSM domain containing protein, expressed	gene	LSM domain containing protein, expressed	chr8	2964361	2967018	+	CDS
3	LOC_Os11g01010	autophagy-related protein 8D, putative, expressed	gene	autophagy-related protein 8D, putative, expressed	chr11	162	3165	-	CDS,downstream
3	LOC_Os10g35020	glycosyltransferase, putative, expressed	gene	glycosyltransferase, putative, expressed	chr10	18611534	18614128	-	three_prime_UTR,promoter
3	LOC_Os01g43390	uroporphyrinogen decarboxylase, putative, expressed	gene	uroporphyrinogen decarboxylase, putative, expressed	chr1	24822953	24827119	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g05900	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr6	2698911	2704118	+	CDS,promoter
3	LOC_Os07g24230	integral membrane transporter family protein, putative, expressed	gene	integral membrane transporter family protein, putative, expressed	chr7	13775874	13779346	-	CDS
3	LOC_Os04g49954	expressed protein	gene	expressed protein	chr4	29613091	29616627	+	three_prime_UTR,downstream
3	LOC_Os08g01390	phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed	gene	phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed	chr8	249589	257794	+	CDS,three_prime_UTR
3	LOC_Os06g45870	expressed protein	gene	expressed protein	chr6	27755426	27759085	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g11040	expressed protein	gene	expressed protein	chr6	5783167	5787999	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g28850	Kinesin motor domain domain containing protein, expressed	gene	Kinesin motor domain domain containing protein, expressed	chr2	17068331	17076353	+	CDS
3	LOC_Os03g33580	mitotic checkpoint protein, putative, expressed	gene	mitotic checkpoint protein, putative, expressed	chr3	19182591	19190098	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g25750	SNARE associated Golgi protein, putative, expressed	gene	SNARE associated Golgi protein, putative, expressed	chr3	14727459	14736997	+	CDS
3	LOC_Os08g01600	polygalacturonase, putative, expressed	gene	polygalacturonase, putative, expressed	chr8	356115	359795	+	CDS,downstream
3	LOC_Os03g17520	CDP-alcohol phosphatidyltransferase, putative, expressed	gene	CDP-alcohol phosphatidyltransferase, putative, expressed	chr3	9732082	9736501	-	CDS,three_prime_UTR
3	LOC_Os11g32470	NEF1, putative, expressed	gene	NEF1, putative, expressed	chr11	18699703	18706319	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g47630	expressed protein	gene	expressed protein	chr1	27245185	27246972	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g65450	ubiquitin-like domain-containing CTD phosphatase 1, putative, expressed	gene	ubiquitin-like domain-containing CTD phosphatase 1, putative, expressed	chr1	37985764	37990752	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g03670	expressed protein	gene	expressed protein	chr2	1531654	1535776	-	CDS,three_prime_UTR
3	LOC_Os01g68870	leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed	gene	leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed	chr1	40015558	40022818	+	CDS,five_prime_UTR
3	LOC_Os08g15080	proline rich protein 3, putative, expressed	gene	proline rich protein 3, putative, expressed	chr8	9122564	9126613	+	three_prime_UTR,downstream
3	LOC_Os07g04230	mTERF domain containing protein, expressed	gene	mTERF domain containing protein, expressed	chr7	1855680	1860031	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os09g29810	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr9	18114124	18120106	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g11790	OsFBX79 - F-box domain containing protein, expressed	gene	OsFBX79 - F-box domain containing protein, expressed	chr3	6166004	6173031	+	CDS,three_prime_UTR
3	LOC_Os06g43210	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr6	25966863	25973647	-	CDS,three_prime_UTR
3	LOC_Os08g09230	starch synthase III, putative, expressed	gene	starch synthase III, putative, expressed	chr8	5351108	5362370	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g23823	helix-loop-helix DNA-binding domain containing protein, expressed	gene	helix-loop-helix DNA-binding domain containing protein, expressed	chr2	13753341	13761401	+	CDS
3	LOC_Os07g36390	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr7	21752829	21756329	+	three_prime_UTR
3	LOC_Os02g19040	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr2	11116174	11120331	+	CDS
3	LOC_Os08g33154	expressed protein	gene	expressed protein	chr8	20616285	20620067	-	three_prime_UTR,promoter
3	LOC_Os12g39860	phosphoribosyl transferase, putative, expressed	gene	phosphoribosyl transferase, putative, expressed	chr12	24603362	24606304	-	CDS,three_prime_UTR
3	LOC_Os03g58120	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr3	33084324	33088004	+	CDS
3	LOC_Os01g12650	reticulon domain containing protein, putative, expressed	gene	reticulon domain containing protein, putative, expressed	chr1	6966620	6969164	+	three_prime_UTR,downstream
3	LOC_Os05g02250	expressed protein	gene	expressed protein	chr5	716223	718904	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g56270	receptor protein kinase CLAVATA1 precursor, putative, expressed	gene	receptor protein kinase CLAVATA1 precursor, putative, expressed	chr3	32071519	32076517	+	three_prime_UTR
3	LOC_Os02g39180	expressed protein	gene	expressed protein	chr2	23658876	23661294	+	CDS,three_prime_UTR
3	LOC_Os03g22950	acyl carrier protein, putative, expressed	gene	acyl carrier protein, putative, expressed	chr3	13256950	13259356	-	three_prime_UTR
3	LOC_Os03g52040	OsSCP19 - Putative Serine Carboxypeptidase homologue, expressed	gene	OsSCP19 - Putative Serine Carboxypeptidase homologue, expressed	chr3	29851944	29857635	+	CDS,three_prime_UTR
3	LOC_Os07g47250	lipase precursor, putative, expressed	gene	lipase precursor, putative, expressed	chr7	28239473	28244457	+	CDS,three_prime_UTR
3	LOC_Os04g53502	expressed protein	gene	expressed protein	chr4	31679078	31682304	+	CDS
3	LOC_Os05g01040	serine/threonine-protein kinase, putative, expressed	gene	serine/threonine-protein kinase, putative, expressed	chr5	64497	69949	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g16880	protein of unknown function DUF502 domain containing protein, expressed	gene	protein of unknown function DUF502 domain containing protein, expressed	chr2	9617781	9623833	-	CDS,three_prime_UTR
3	LOC_Os12g07800	S-locus-like receptor protein kinase, putative, expressed	gene	S-locus-like receptor protein kinase, putative, expressed	chr12	3937881	3942935	+	CDS
3	LOC_Os03g27840	splicing factor, arginine/serine-rich 16, putative, expressed	gene	splicing factor, arginine/serine-rich 16, putative, expressed	chr3	15985072	15991482	+	CDS
3	LOC_Os06g49980	expressed protein	gene	expressed protein	chr6	30268921	30271803	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g37640	MATE efflux family protein, putative, expressed	gene	MATE efflux family protein, putative, expressed	chr3	20866835	20874227	-	CDS
3	LOC_Os06g40460	expressed protein	gene	expressed protein	chr6	24101952	24107384	+	CDS,three_prime_UTR
3	LOC_Os01g54390	S4 domain containing protein, putative, expressed	gene	S4 domain containing protein, putative, expressed	chr1	31287126	31291754	+	three_prime_UTR,promoter,downstream
3	LOC_Os05g41310	disease resistance protein RGA2, putative, expressed	gene	disease resistance protein RGA2, putative, expressed	chr5	24134633	24137962	+	CDS,promoter,downstream
3	LOC_Os07g44700	expressed protein	gene	expressed protein	chr7	26676064	26679142	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g02490	expressed protein	gene	expressed protein	chr1	803084	805932	-	five_prime_UTR,CDS
3	LOC_Os11g01190	expressed protein	gene	expressed protein	chr11	109158	115986	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g45950	amino acid permease family protein, putative, expressed	gene	amino acid permease family protein, putative, expressed	chr4	27028960	27033710	-	three_prime_UTR,promoter
3	LOC_Os10g36530	mutS domain V family protein, expressed	gene	mutS domain V family protein, expressed	chr10	19469831	19477621	+	three_prime_UTR
3	LOC_Os01g70920	cullin-1, putative, expressed	gene	cullin-1, putative, expressed	chr1	41051305	41055606	+	CDS,three_prime_UTR
3	LOC_Os03g53530	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr3	30694125	30697548	-	CDS
3	LOC_Os06g47770	expressed protein	gene	expressed protein	chr6	28909277	28913946	-	CDS
3	LOC_Os08g33920	60S ribosomal protein L34, putative, expressed	gene	60S ribosomal protein L34, putative, expressed	chr8	21218484	21220339	-	three_prime_UTR,promoter
3	LOC_Os09g13740	SET domain containing protein, expressed	gene	SET domain containing protein, expressed	chr9	8038176	8045950	-	CDS,three_prime_UTR
3	LOC_Os01g54860	enoyl-CoA hydratase/isomerase family protein, putative, expressed	gene	enoyl-CoA hydratase/isomerase family protein, putative, expressed	chr1	31551413	31555793	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g09270	ubiquitin carboxyl-terminal hydrolase 26, putative, expressed	gene	ubiquitin carboxyl-terminal hydrolase 26, putative, expressed	chr3	4839903	4843357	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os12g01940	expressed protein	gene	expressed protein	chr12	558262	561829	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g17060	expressed protein	gene	expressed protein	chr1	9792935	9795805	-	three_prime_UTR,five_prime_UTR,CDS,downstream
3	LOC_Os09g08420	AGC_PVPK_like_kin82y.15 - ACG kinases include homologs to PKA, PKG and PKC, expressed	gene	AGC_PVPK_like_kin82y.15 - ACG kinases include homologs to PKA, PKG and PKC, expressed	chr9	4381992	4385627	-	CDS,three_prime_UTR
3	LOC_Os12g39320	DUF221 domain containing protein, expressed	gene	DUF221 domain containing protein, expressed	chr12	24157894	24164087	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g51480	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr2	31523730	31525990	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g15850	josephin, putative, expressed	gene	josephin, putative, expressed	chr3	8740809	8743068	-	three_prime_UTR,promoter
3	LOC_Os03g58080	BT1 family protein, putative, expressed	gene	BT1 family protein, putative, expressed	chr3	33058247	33063744	-	CDS,promoter,downstream
3	LOC_Os02g02770	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr2	1047595	1050120	-	three_prime_UTR,promoter
3	LOC_Os03g38330	disease resistance RPP13-like protein 1, putative, expressed	gene	disease resistance RPP13-like protein 1, putative, expressed	chr3	21266919	21270922	+	CDS,three_prime_UTR
3	LOC_Os07g44770	expressed protein	gene	expressed protein	chr7	26718129	26721218	-	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os07g39460	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr7	23632885	23642207	-	CDS,promoter
3	LOC_Os03g13860	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr3	7513040	7516490	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g02720	elongation factor Tu, putative, expressed	gene	elongation factor Tu, putative, expressed	chr1	928883	933914	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g21320	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	12652063	12654527	-	CDS,downstream
3	LOC_Os10g26050	methionyl-tRNA synthetase, putative, expressed	gene	methionyl-tRNA synthetase, putative, expressed	chr10	13421554	13425542	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g38580	cyclic nucleotide-gated ion channel, putative, expressed	gene	cyclic nucleotide-gated ion channel, putative, expressed	chr9	22192244	22196706	+	CDS,three_prime_UTR,promoter
3	LOC_Os11g05120	expressed protein	gene	expressed protein	chr11	2240903	2243075	-	three_prime_UTR,promoter,downstream
3	LOC_Os01g36840	ATP-binding region, ATPase-like domain containing protein, expressed	gene	ATP-binding region, ATPase-like domain containing protein, expressed	chr1	20488109	20500721	-	CDS,three_prime_UTR
3	LOC_Os12g25494	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr12	14751646	14755330	-	three_prime_UTR
3	LOC_Os10g30180	hsp20/alpha crystallin family protein, putative, expressed	gene	hsp20/alpha crystallin family protein, putative, expressed	chr10	15617543	15618620	+	CDS,downstream
3	LOC_Os05g45210	respiratory burst oxidase, putative, expressed	gene	respiratory burst oxidase, putative, expressed	chr5	26174822	26183256	-	CDS,three_prime_UTR
3	LOC_Os06g07230	tyrosine protein kinase domain containing protein, putative, expressed	gene	tyrosine protein kinase domain containing protein, putative, expressed	chr6	3459179	3464374	-	CDS
3	LOC_Os10g17990	phosphatidate cytidylyltransferase, putative, expressed	gene	phosphatidate cytidylyltransferase, putative, expressed	chr10	9049394	9055387	-	CDS
3	LOC_Os06g46000	tubulin/FtsZ domain containing protein, putative, expressed	gene	tubulin/FtsZ domain containing protein, putative, expressed	chr6	27876524	27879147	-	CDS,three_prime_UTR
3	LOC_Os04g52270	coatomer subunit epsilon, putative, expressed	gene	coatomer subunit epsilon, putative, expressed	chr4	30878731	30883760	-	CDS
3	LOC_Os12g21798	40S ribosomal protein S3a, putative, expressed	gene	40S ribosomal protein S3a, putative, expressed	chr12	12267718	12271708	-	CDS,three_prime_UTR
3	LOC_Os07g07010	glucosyltransferase, putative, expressed	gene	glucosyltransferase, putative, expressed	chr7	3452912	3456174	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g06760	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr6	3174776	3180763	-	CDS,three_prime_UTR
3	LOC_Os01g12410	receptor-like protein kinase, putative	gene	receptor-like protein kinase, putative	chr1	6780919	6783207	-	CDS,downstream
3	LOC_Os05g01110	ribosomal protein L28 protein, putative, expressed	gene	ribosomal protein L28 protein, putative, expressed	chr5	97343	99802	-	three_prime_UTR,promoter
3	LOC_Os06g46754	RIC10, putative, expressed	gene	RIC10, putative, expressed	chr6	28389333	28395009	-	five_prime_UTR,CDS
3	LOC_Os07g44070	pectinacetylesterase domain containing protein, expressed	gene	pectinacetylesterase domain containing protein, expressed	chr7	26339134	26343363	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g41890	microtubule associated protein, putative, expressed	gene	microtubule associated protein, putative, expressed	chr8	26445704	26450247	+	five_prime_UTR,CDS,promoter
3	LOC_Os08g06010	transporter, major facilitator family, putative, expressed	gene	transporter, major facilitator family, putative, expressed	chr8	3280100	3283503	+	three_prime_UTR,downstream
3	LOC_Os03g55850	cold acclimation protein WCOR413, putative, expressed	gene	cold acclimation protein WCOR413, putative, expressed	chr3	31783354	31786233	+	CDS
3	LOC_Os03g61810	tRNA-specific adenosine deaminase, putative, expressed	gene	tRNA-specific adenosine deaminase, putative, expressed	chr3	35034824	35037524	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g38040	leucine-rich repeat family protein, putative, expressed	gene	leucine-rich repeat family protein, putative, expressed	chr2	22972961	22975702	+	three_prime_UTR,downstream
3	LOC_Os01g16430	cysteine proteinase inhibitor precursor protein, putative, expressed	gene	cysteine proteinase inhibitor precursor protein, putative, expressed	chr1	9324521	9328310	-	CDS,three_prime_UTR
3	LOC_Os02g12130	cysteine-rich receptor-like protein kinase 35 precursor, putative, expressed	gene	cysteine-rich receptor-like protein kinase 35 precursor, putative, expressed	chr2	6311211	6313776	+	CDS,promoter,downstream
3	LOC_Os10g31970	SNF2 family N-terminal domain containing protein, expressed	gene	SNF2 family N-terminal domain containing protein, expressed	chr10	16716390	16729888	+	CDS
3	LOC_Os03g02690	dihydrodipicolinate reductase, putative, expressed	gene	dihydrodipicolinate reductase, putative, expressed	chr3	1003297	1006267	+	CDS,three_prime_UTR
3	LOC_Os03g12750	hypothetical protein	gene	hypothetical protein	chr3	6815149	6818144	+	CDS
3	LOC_Os01g25820	respiratory burst oxidase, putative, expressed	gene	respiratory burst oxidase, putative, expressed	chr1	14620269	14626911	-	CDS
3	LOC_Os03g63420	OsGrx_S14 - glutaredoxin subgroup II, expressed	gene	OsGrx_S14 - glutaredoxin subgroup II, expressed	chr3	35823228	35825439	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g37580	cation transport regulator-like protein 1, putative, expressed	gene	cation transport regulator-like protein 1, putative, expressed	chr4	22169830	22172882	-	CDS
3	LOC_Os05g02020	protein kinase APK1A, chloroplast precursor, putative, expressed	gene	protein kinase APK1A, chloroplast precursor, putative, expressed	chr5	577144	580488	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g53000	XRCC4, putative, expressed	gene	XRCC4, putative, expressed	chr3	30388542	30391303	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g60330	inactive receptor kinase At2g26730 precursor, putative, expressed	gene	inactive receptor kinase At2g26730 precursor, putative, expressed	chr1	34898113	34900690	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g47410	aspartic proteinase oryzasin-1 precursor, putative, expressed	gene	aspartic proteinase oryzasin-1 precursor, putative, expressed	chr1	27084701	27091196	-	CDS
3	LOC_Os03g59050	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr3	33605332	33610651	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g26890	G-protein alpha subunit, putative, expressed	gene	G-protein alpha subunit, putative, expressed	chr5	15552385	15556024	-	CDS,promoter
3	LOC_Os12g37840	boron transporter protein, putative, expressed	gene	boron transporter protein, putative, expressed	chr12	23215284	23219805	+	CDS,three_prime_UTR
3	LOC_Os05g45700	hypothetical protein	gene	hypothetical protein	chr5	26412006	26415125	-	CDS,downstream
3	LOC_Os02g32230	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr2	19030106	19035150	+	CDS,three_prime_UTR
3	LOC_Os09g36290	Ser/Thr protein phosphatase family protein, putative, expressed	gene	Ser/Thr protein phosphatase family protein, putative, expressed	chr9	20942009	20945432	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g11050	26S protease regulatory subunit, putative, expressed	gene	26S protease regulatory subunit, putative, expressed	chr2	5918931	5923654	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g27010	APE1, putative, expressed	gene	APE1, putative, expressed	chr8	16503401	16507612	+	CDS,three_prime_UTR
3	LOC_Os12g09000	phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase, putative, expressed	gene	phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase, putative, expressed	chr12	4705832	4710321	+	CDS,three_prime_UTR
3	LOC_Os03g13760	LSM domain containing protein, expressed	gene	LSM domain containing protein, expressed	chr3	7448720	7451976	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g22640	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr1	12733072	12737086	+	CDS
3	LOC_Os01g73580	glycosyl hydrolases, putative, expressed	gene	glycosyl hydrolases, putative, expressed	chr1	42625277	42629396	+	CDS,promoter
3	LOC_Os10g41820	dynamin family protein, putative, expressed	gene	dynamin family protein, putative, expressed	chr10	22431907	22438605	-	CDS,three_prime_UTR
3	LOC_Os04g39170	expressed protein	gene	expressed protein	chr4	23106132	23110048	+	three_prime_UTR,downstream
3	LOC_Os12g09700	Jacalin-like lectin domain containing protein, putative, expressed	gene	Jacalin-like lectin domain containing protein, putative, expressed	chr12	5115331	5117084	-	five_prime_UTR,CDS,downstream
3	LOC_Os03g08640	ORC2 - Putative origin recognition complex subunit 2, expressed	gene	ORC2 - Putative origin recognition complex subunit 2, expressed	chr3	4445712	4448165	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g08000	DNA binding protein, putative, expressed	gene	DNA binding protein, putative, expressed	chr8	4522654	4531059	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g59510	chloroplast ribonuclease III domain protein, putative, expressed	gene	chloroplast ribonuclease III domain protein, putative, expressed	chr1	34411810	34415945	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g39480	OsWRKY78 - Superfamily of TFs having WRKY and zinc finger domains, expressed	gene	OsWRKY78 - Superfamily of TFs having WRKY and zinc finger domains, expressed	chr7	23653083	23658632	-	CDS,three_prime_UTR
3	LOC_Os01g67220	Os1bglu4 - beta-glucosidase-like protein without signal sequence, expressed	gene	Os1bglu4 - beta-glucosidase-like protein without signal sequence, expressed	chr1	39003945	39009583	+	CDS,three_prime_UTR
3	LOC_Os09g23334	expressed protein	gene	expressed protein	chr9	13849910	13853114	+	CDS
3	LOC_Os02g49530	AGAP000425-PA, putative, expressed	gene	AGAP000425-PA, putative, expressed	chr2	30270471	30273458	-	CDS,promoter
3	LOC_Os05g43680	expressed protein	gene	expressed protein	chr5	25330284	25333475	-	CDS
3	LOC_Os07g07060	prolyl-tRNA synthetase, putative, expressed	gene	prolyl-tRNA synthetase, putative, expressed	chr7	3482094	3485795	+	CDS
3	LOC_Os10g30190	BTBP2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with pentapeptide repeats, expressed	gene	BTBP2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with pentapeptide repeats, expressed	chr10	15618435	15621874	-	CDS,three_prime_UTR
3	LOC_Os08g03380	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr8	1579879	1583991	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g06190	phytosulfokine receptor precursor, putative, expressed	gene	phytosulfokine receptor precursor, putative, expressed	chr2	3092568	3095182	-	five_prime_UTR,CDS,downstream
3	LOC_Os04g43490	CK1_CaseinKinase_1.7 - CK1 includes the casein kinase 1 kinases, expressed	gene	CK1_CaseinKinase_1.7 - CK1 includes the casein kinase 1 kinases, expressed	chr4	25542145	25546665	-	CDS
3	LOC_Os04g53380	expressed protein	gene	expressed protein	chr4	31603302	31615895	-	CDS,three_prime_UTR
3	LOC_Os06g43680	palmitoyltransferase TIP1, putative, expressed	gene	palmitoyltransferase TIP1, putative, expressed	chr6	26295682	26302263	+	CDS
3	LOC_Os03g58430	40S ribosomal protein S15, putative, expressed	gene	40S ribosomal protein S15, putative, expressed	chr3	33283565	33286179	-	CDS,three_prime_UTR
3	LOC_Os06g19680	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr6	11236430	11241835	-	CDS,three_prime_UTR
3	LOC_Os01g01120	enolase-phosphatase E1, putative, expressed	gene	enolase-phosphatase E1, putative, expressed	chr1	61059	62576	+	three_prime_UTR,promoter,downstream
3	LOC_Os09g34290	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr9	20240979	20242597	-	CDS,promoter,downstream
3	LOC_Os01g61620	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr1	35652143	35657363	+	CDS,three_prime_UTR
3	LOC_Os09g38010	no apical meristem protein, putative, expressed	gene	no apical meristem protein, putative, expressed	chr9	21907156	21909734	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g55570	expressed protein	gene	expressed protein	chr1	32013354	32015234	+	three_prime_UTR,downstream
3	LOC_Os06g47650	phytosulfokine receptor precursor, putative, expressed	gene	phytosulfokine receptor precursor, putative, expressed	chr6	28852373	28855938	+	CDS
3	LOC_Os01g52500	NADP-dependent malic enzyme, putative, expressed	gene	NADP-dependent malic enzyme, putative, expressed	chr1	30164972	30170614	+	CDS
3	LOC_Os11g18947	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr11	10781211	10786283	-	CDS,three_prime_UTR
3	LOC_Os12g42430	IQ calmodulin-binding motif domain containing protein, expressed	gene	IQ calmodulin-binding motif domain containing protein, expressed	chr12	26335618	26341045	-	CDS
3	LOC_Os01g60790	40S ribosomal protein S26, putative, expressed	gene	40S ribosomal protein S26, putative, expressed	chr1	35152651	35154861	+	CDS,three_prime_UTR,promoter
3	LOC_Os04g38340	endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed	gene	endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed	chr4	22621585	22627044	-	CDS,three_prime_UTR
3	LOC_Os02g33010	expressed protein	gene	expressed protein	chr2	19617165	19622906	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g24540	signal peptide peptidase-like 2B, putative, expressed	gene	signal peptide peptidase-like 2B, putative, expressed	chr11	13532777	13543738	+	CDS,three_prime_UTR
3	LOC_Os09g33680	Os9bglu31 - beta-glucosidase, dhurrinase, similar to G. max hydroxyisourate hydrolase, expressed	gene	Os9bglu31 - beta-glucosidase, dhurrinase, similar to G. max hydroxyisourate hydrolase, expressed	chr9	19882167	19887643	-	CDS,promoter
3	LOC_Os11g39190	NB-ARC domain containing protein, putative, expressed	gene	NB-ARC domain containing protein, putative, expressed	chr11	22867533	22871307	+	CDS
3	LOC_Os02g30460	uncharacterized protein MJ0304, putative, expressed	gene	uncharacterized protein MJ0304, putative, expressed	chr2	18133195	18136884	-	CDS
3	LOC_Os08g40450	uvrB/uvrC motif family protein, expressed	gene	uvrB/uvrC motif family protein, expressed	chr8	25590406	25594230	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g35560	glutathione S-transferase, putative, expressed	gene	glutathione S-transferase, putative, expressed	chr4	21490128	21492410	-	three_prime_UTR,promoter
3	LOC_Os02g42710	C2 domain containing protein, putative, expressed	gene	C2 domain containing protein, putative, expressed	chr2	25678175	25681280	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g46750	elongation factor protein, putative, expressed	gene	elongation factor protein, putative, expressed	chr7	27940763	27943320	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g12690	transposon protein, putative, Pong sub-class, expressed	gene	transposon protein, putative, Pong sub-class, expressed	chr12	6983873	6986516	-	CDS
3	LOC_Os05g50840	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr5	29093682	29099023	-	CDS,three_prime_UTR
3	LOC_Os03g12560	expressed protein	gene	expressed protein	chr3	6653500	6655681	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g22800	OsFBT5 - F-box and tubby domain containing protein, expressed	gene	OsFBT5 - F-box and tubby domain containing protein, expressed	chr3	13163212	13168094	-	CDS,three_prime_UTR
3	LOC_Os05g51040	tesmin/TSO1-like CXC domain containing protein, expressed	gene	tesmin/TSO1-like CXC domain containing protein, expressed	chr5	29229791	29231001	+	CDS,downstream
3	LOC_Os05g01310	ankyrin repeat family protein, putative, expressed	gene	ankyrin repeat family protein, putative, expressed	chr5	197718	201631	-	CDS,three_prime_UTR,downstream
3	LOC_Os05g46490	mov34 family protein, putative, expressed	gene	mov34 family protein, putative, expressed	chr5	26867837	26873230	+	CDS
3	LOC_Os03g55950	H-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed	gene	H-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed	chr3	31846749	31850815	+	CDS,three_prime_UTR
3	LOC_Os10g35760	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr10	19040753	19046182	+	CDS,three_prime_UTR
3	LOC_Os07g46410	bifunctional thioredoxin reductase/thioredoxin, putative, expressed	gene	bifunctional thioredoxin reductase/thioredoxin, putative, expressed	chr7	27693629	27698171	+	CDS
3	LOC_Os12g17310	prefoldin, putative, expressed	gene	prefoldin, putative, expressed	chr12	9904893	9912476	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g42424	ubiquitin family protein, putative, expressed	gene	ubiquitin family protein, putative, expressed	chr5	24799824	24802442	+	CDS,three_prime_UTR
3	LOC_Os03g61019	mitochondrial import inner membrane translocase subunit Tim, putative, expressed	gene	mitochondrial import inner membrane translocase subunit Tim, putative, expressed	chr3	34661855	34664011	-	three_prime_UTR,promoter
3	LOC_Os03g01130	ethylene-responsive element-binding protein, putative, expressed	gene	ethylene-responsive element-binding protein, putative, expressed	chr3	99700	103014	+	three_prime_UTR
3	LOC_Os05g34770	cytochrome c, putative, expressed	gene	cytochrome c, putative, expressed	chr5	20567483	20569891	+	CDS,three_prime_UTR
3	LOC_Os02g02620	sialyltransferase family domain containing protein, expressed	gene	sialyltransferase family domain containing protein, expressed	chr2	961509	965543	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g53630	PHD finger family protein, putative, expressed	gene	PHD finger family protein, putative, expressed	chr3	30740482	30748610	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g30250	transposon protein, putative, CACTA, En/Spm sub-class	gene	transposon protein, putative, CACTA, En/Spm sub-class	chr8	18589878	18593616	+	CDS,promoter
3	LOC_Os08g23780	glycosyl transferase 8 domain containing protein, putative, expressed	gene	glycosyl transferase 8 domain containing protein, putative, expressed	chr8	14395209	14400359	+	CDS,three_prime_UTR
3	LOC_Os01g73690	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr1	42694047	42698015	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g04830	leucine rich repeat protein, putative, expressed	gene	leucine rich repeat protein, putative, expressed	chr6	2105720	2110721	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g24470	PHS1, putative, expressed	gene	PHS1, putative, expressed	chr1	13793660	13798880	+	CDS,five_prime_UTR,downstream
3	LOC_Os06g48530	ZOS6-09 - C2H2 zinc finger protein, expressed	gene	ZOS6-09 - C2H2 zinc finger protein, expressed	chr6	29356514	29363557	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g37130	expressed protein	gene	expressed protein	chr2	22439111	22443133	-	CDS,three_prime_UTR
3	LOC_Os03g64014	expressed protein	gene	expressed protein	chr3	36170293	36173099	-	three_prime_UTR,downstream
3	LOC_Os04g43050	Dicer, putative, expressed	gene	Dicer, putative, expressed	chr4	25288953	25303863	-	CDS
3	LOC_Os05g04670	hypothetical protein	gene	hypothetical protein	chr5	2206981	2208743	+	CDS,promoter,downstream
3	LOC_Os07g17220	disease resistance protein, putative, expressed	gene	disease resistance protein, putative, expressed	chr7	10141295	10144922	-	CDS,three_prime_UTR
3	LOC_Os04g18030	Sec1 family transport protein, putative, expressed	gene	Sec1 family transport protein, putative, expressed	chr4	9930237	9947024	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g31840	leucine-rich repeat family protein, putative, expressed	gene	leucine-rich repeat family protein, putative, expressed	chr7	18913951	18919567	-	CDS,three_prime_UTR
3	LOC_Os01g62244	ubiquitin-conjugating enzyme, putative, expressed	gene	ubiquitin-conjugating enzyme, putative, expressed	chr1	36016161	36022426	-	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os05g01180	zinc knuckle family protein, expressed	gene	zinc knuckle family protein, expressed	chr5	140780	143130	-	three_prime_UTR,promoter
3	LOC_Os01g56140	expressed protein	gene	expressed protein	chr1	32326654	32331733	-	CDS,three_prime_UTR
3	LOC_Os05g35570	DUF803 domain containing, putative, expressed	gene	DUF803 domain containing, putative, expressed	chr5	21072679	21076056	-	three_prime_UTR
3	LOC_Os05g49590	suppressor of phythchrome A, putative, expressed	gene	suppressor of phythchrome A, putative, expressed	chr5	28382352	28390286	-	CDS,three_prime_UTR
3	LOC_Os10g35490	hydrolase, alpha/beta fold family domain containing protein, expressed	gene	hydrolase, alpha/beta fold family domain containing protein, expressed	chr10	18917869	18919982	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g17450	nucleotide binding protein, putative, expressed	gene	nucleotide binding protein, putative, expressed	chr3	9702625	9706115	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g66130	armadillo/beta-catenin repeat family protein, putative, expressed	gene	armadillo/beta-catenin repeat family protein, putative, expressed	chr1	38408158	38412022	+	CDS,downstream
3	LOC_Os01g39670	OsFBD1 - F-box and FBD domain containing protein, expressed	gene	OsFBD1 - F-box and FBD domain containing protein, expressed	chr1	22374530	22376515	+	CDS
3	LOC_Os03g04030	HVA22, putative, expressed	gene	HVA22, putative, expressed	chr3	1835603	1838777	-	CDS
3	LOC_Os07g11000	structural constituent of ribosome, putative, expressed	gene	structural constituent of ribosome, putative, expressed	chr7	6035078	6043558	+	CDS
3	LOC_Os02g45870	tobamovirus multiplication protein, putative, expressed	gene	tobamovirus multiplication protein, putative, expressed	chr2	27956237	27959404	+	CDS
3	LOC_Os09g26180	transcription initiation factor TFIID subunit 10, putative, expressed	gene	transcription initiation factor TFIID subunit 10, putative, expressed	chr9	15780079	15783884	-	three_prime_UTR,promoter
3	LOC_Os08g41840	expressed protein	gene	expressed protein	chr8	26419502	26421288	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g73680	aspartyl aminopeptidase, putative, expressed	gene	aspartyl aminopeptidase, putative, expressed	chr1	42688849	42695014	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g09320	NADP-dependent malic enzyme, chloroplast precursor, putative, expressed	gene	NADP-dependent malic enzyme, chloroplast precursor, putative, expressed	chr1	4737905	4743591	-	CDS
3	LOC_Os07g46520	rhythmically expressed gene 2 protein, putative, expressed	gene	rhythmically expressed gene 2 protein, putative, expressed	chr7	27782655	27785927	-	CDS,three_prime_UTR
3	LOC_Os06g08090	heparanase-like protein precursor, putative, expressed	gene	heparanase-like protein precursor, putative, expressed	chr6	3923682	3926946	-	CDS,promoter
3	LOC_Os03g61890	chloroplast protein import component Toc159, putative, expressed	gene	chloroplast protein import component Toc159, putative, expressed	chr3	35077642	35083169	+	CDS
3	LOC_Os07g41800	peroxisome assembly protein, putative, expressed	gene	peroxisome assembly protein, putative, expressed	chr7	25038220	25042741	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g55974	deoxycytidylate deaminase, putative, expressed	gene	deoxycytidylate deaminase, putative, expressed	chr1	32231991	32237936	-	CDS,three_prime_UTR
3	LOC_Os02g34630	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr2	20757456	20761750	-	CDS,three_prime_UTR
3	LOC_Os03g19930	adenylosuccinate lyase, putative, expressed	gene	adenylosuccinate lyase, putative, expressed	chr3	11209477	11213664	+	CDS,three_prime_UTR
3	LOC_Os04g54420	protein of unknown function, DUF618 domain containing protein, expressed	gene	protein of unknown function, DUF618 domain containing protein, expressed	chr4	32193596	32196934	-	CDS,three_prime_UTR
3	LOC_Os12g44230	expressed protein	gene	expressed protein	chr12	27396595	27401494	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g66630	S-domain receptor-like protein kinase, putative	gene	S-domain receptor-like protein kinase, putative	chr1	38697999	38700515	+	CDS,promoter
3	LOC_Os08g13360	kelch repeat protein, putative, expressed	gene	kelch repeat protein, putative, expressed	chr8	7945532	7950942	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g49270	AMP deaminase, putative, expressed	gene	AMP deaminase, putative, expressed	chr7	29504015	29512215	+	CDS,promoter
3	LOC_Os07g08940	hypothetical protein	gene	hypothetical protein	chr7	4648675	4649556	-	CDS,promoter,downstream
3	LOC_Os02g17390	3-hydroxyacyl-CoA dehydrogenase, putative, expressed	gene	3-hydroxyacyl-CoA dehydrogenase, putative, expressed	chr2	10001462	10010226	+	CDS
3	LOC_Os09g15775	expressed protein	gene	expressed protein	chr9	9635408	9636760	+	CDS,downstream
3	LOC_Os01g59870	LTPL65 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	gene	LTPL65 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	chr1	34625141	34628954	+	three_prime_UTR,downstream
3	LOC_Os08g21570	25.3 kDa vesicle transport protein, putative	gene	25.3 kDa vesicle transport protein, putative	chr8	12845805	12847939	+	CDS
3	LOC_Os01g73780	chloroplast outer envelope 24 kD protein, putative, expressed	gene	chloroplast outer envelope 24 kD protein, putative, expressed	chr1	42734948	42736896	-	three_prime_UTR,downstream
3	LOC_Os02g48840	dual specificity protein phosphatase, putative, expressed	gene	dual specificity protein phosphatase, putative, expressed	chr2	29876197	29879380	+	CDS,three_prime_UTR,promoter
3	LOC_Os12g32790	disease resistance RPP13-like protein 1, putative, expressed	gene	disease resistance RPP13-like protein 1, putative, expressed	chr12	19777406	19781128	+	CDS,three_prime_UTR
3	LOC_Os01g27730	GTPase of unknown function domain containing protein, putative, expressed	gene	GTPase of unknown function domain containing protein, putative, expressed	chr1	15461039	15465734	-	CDS,three_prime_UTR
3	LOC_Os05g15180	expressed protein	gene	expressed protein	chr5	8616429	8618414	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g51880	GA15368-PA, putative, expressed	gene	GA15368-PA, putative, expressed	chr3	29738674	29740901	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g56910	expressed protein	gene	expressed protein	chr1	32868249	32877172	+	CDS,three_prime_UTR
3	LOC_Os04g33360	gibberellin 2-beta-dioxygenase 7, putative, expressed	gene	gibberellin 2-beta-dioxygenase 7, putative, expressed	chr4	20028114	20029927	+	three_prime_UTR,downstream
3	LOC_Os05g06340	GATA zinc finger domain containing protein	gene	GATA zinc finger domain containing protein	chr5	3245180	3247479	-	CDS,promoter
3	LOC_Os12g18770	oxysterol-binding protein, putative, expressed	gene	oxysterol-binding protein, putative, expressed	chr12	10859655	10869587	-	CDS,three_prime_UTR
3	LOC_Os05g44390	peptidyl-tRNA hydrolase, putative, expressed	gene	peptidyl-tRNA hydrolase, putative, expressed	chr5	25761125	25764222	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g45940	potassium transporter, putative, expressed	gene	potassium transporter, putative, expressed	chr6	27818966	27826495	+	CDS
3	LOC_Os04g02500	G-patch domain containing protein, expressed	gene	G-patch domain containing protein, expressed	chr4	904391	908965	+	CDS,three_prime_UTR
3	LOC_Os11g11210	OsClp12 - Putative Clp protease homologue, expressed	gene	OsClp12 - Putative Clp protease homologue, expressed	chr11	6196921	6200411	-	CDS
3	LOC_Os02g03330	expressed protein	gene	expressed protein	chr2	1344644	1347027	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g56869	ribose-5-phosphate isomerase A, putative, expressed	gene	ribose-5-phosphate isomerase A, putative, expressed	chr3	32387810	32390129	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g02180	expressed protein	gene	expressed protein	chr1	639588	643269	-	CDS,three_prime_UTR
3	LOC_Os03g30570	protein of unknown function DUF1675 domain containing protein, expressed	gene	protein of unknown function DUF1675 domain containing protein, expressed	chr3	17447988	17451464	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g12370	expressed protein	gene	expressed protein	chr2	6443131	6445362	+	three_prime_UTR
3	LOC_Os03g61760	OsSPL6 - SBP-box gene family member, expressed	gene	OsSPL6 - SBP-box gene family member, expressed	chr3	35000871	35008600	-	CDS,three_prime_UTR
3	LOC_Os02g10080	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	gene	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	chr2	5250028	5253738	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g03150	WD repeat-containing protein, putative, expressed	gene	WD repeat-containing protein, putative, expressed	chr3	1326395	1330208	+	CDS,three_prime_UTR
3	LOC_Os11g10050	G-protein alpha subunit, putative, expressed	gene	G-protein alpha subunit, putative, expressed	chr11	5374175	5379657	-	CDS,three_prime_UTR
3	LOC_Os10g27180	expressed protein	gene	expressed protein	chr10	14255439	14259242	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g56660	calmodulin binding protein, putative, expressed	gene	calmodulin binding protein, putative, expressed	chr3	32258561	32266123	+	CDS,three_prime_UTR
3	LOC_Os06g37150	L-ascorbate oxidase precursor, putative, expressed	gene	L-ascorbate oxidase precursor, putative, expressed	chr6	21950202	21955673	+	three_prime_UTR
3	LOC_Os05g01700	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr5	421032	431736	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g32950	dnaJ C terminal region family protein, expressed	gene	dnaJ C terminal region family protein, expressed	chr7	19691311	19694414	+	CDS
3	LOC_Os02g25580	Sec1 family transport protein, putative, expressed	gene	Sec1 family transport protein, putative, expressed	chr2	14936663	14956221	-	CDS
3	LOC_Os09g03310	phospholipid-transporting ATPase 2, putative, expressed	gene	phospholipid-transporting ATPase 2, putative, expressed	chr9	1611177	1614358	-	CDS
3	LOC_Os06g40860	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr6	24368838	24371851	-	three_prime_UTR,promoter
3	LOC_Os06g47150	auxin response factor 18, putative, expressed	gene	auxin response factor 18, putative, expressed	chr6	28585447	28589360	+	CDS,three_prime_UTR
3	LOC_Os11g39220	acyl-coenzyme A oxidase, putative, expressed	gene	acyl-coenzyme A oxidase, putative, expressed	chr11	22888019	22892188	-	CDS
3	LOC_Os08g17294	PSF3 - Putative GINS complex subunit, expressed	gene	PSF3 - Putative GINS complex subunit, expressed	chr8	10566335	10577015	+	CDS
3	LOC_Os12g04270	cytochrome c-type biogenesis protein dbsD-like, putative, expressed	gene	cytochrome c-type biogenesis protein dbsD-like, putative, expressed	chr12	1806668	1810161	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g58280	expressed protein	gene	expressed protein	chr2	35662131	35665757	-	CDS,promoter
3	LOC_Os07g30160	trehalose phosphatase, putative, expressed	gene	trehalose phosphatase, putative, expressed	chr7	17815199	17820239	+	three_prime_UTR,downstream
3	LOC_Os05g45030	calcium homeostasis regulator CHoR1, putative, expressed	gene	calcium homeostasis regulator CHoR1, putative, expressed	chr5	26112947	26114487	+	three_prime_UTR,downstream
3	LOC_Os06g15740	hypothetical protein	gene	hypothetical protein	chr6	8924129	8929445	-	CDS
3	LOC_Os04g31524	expressed protein	gene	expressed protein	chr4	18675065	18678825	-	three_prime_UTR
3	LOC_Os07g37650	GTPase-activating protein, putative, expressed	gene	GTPase-activating protein, putative, expressed	chr7	22571139	22576954	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g47470	serine/threonine-protein kinase, putative, expressed	gene	serine/threonine-protein kinase, putative, expressed	chr1	27129497	27133150	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g38970	protein binding protein, putative, expressed	gene	protein binding protein, putative, expressed	chr4	22963085	22966593	-	three_prime_UTR,promoter
3	LOC_Os09g24440	expressed protein	gene	expressed protein	chr9	14530189	14546559	+	CDS,downstream
3	LOC_Os06g47710	leucine-rich repeat receptor-like kinase, putative, expressed	gene	leucine-rich repeat receptor-like kinase, putative, expressed	chr6	28871389	28872807	-	CDS,downstream
3	LOC_Os03g61950	kelch motif family protein, putative, expressed	gene	kelch motif family protein, putative, expressed	chr3	35108139	35114673	+	CDS,three_prime_UTR
3	LOC_Os01g01010	TBC domain containing protein, expressed	gene	TBC domain containing protein, expressed	chr1	1903	9817	+	CDS,three_prime_UTR
3	LOC_Os01g52250	starch synthase, putative, expressed	gene	starch synthase, putative, expressed	chr1	30029952	30040431	-	CDS,three_prime_UTR
3	LOC_Os01g15110	syntaxin, putative, expressed	gene	syntaxin, putative, expressed	chr1	8474499	8478870	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g69904	expressed protein	gene	expressed protein	chr1	40389347	40392080	+	three_prime_UTR
3	LOC_Os01g55170	la domain containing protein, expressed	gene	la domain containing protein, expressed	chr1	31737011	31741750	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g06490	expressed protein	gene	expressed protein	chr3	3251983	3256868	+	three_prime_UTR
3	LOC_Os05g12170	plant-specific domain TIGR01589 family protein, putative, expressed	gene	plant-specific domain TIGR01589 family protein, putative, expressed	chr5	6957321	6964134	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g33090	expressed protein	gene	expressed protein	chr2	19647959	19648574	-	three_prime_UTR,promoter
3	LOC_Os01g59350	transcription factor, putative, expressed	gene	transcription factor, putative, expressed	chr1	34305471	34312276	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g35680	OsFBX339 - F-box domain containing protein, expressed	gene	OsFBX339 - F-box domain containing protein, expressed	chr9	20522218	20524990	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g33898	60S ribosomal protein L44, putative, expressed	gene	60S ribosomal protein L44, putative, expressed	chr7	20272595	20274847	+	CDS,three_prime_UTR
3	LOC_Os12g05830	transporter-related, putative, expressed	gene	transporter-related, putative, expressed	chr12	2683762	2687180	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g29615	expressed protein	gene	expressed protein	chr8	18166016	18169526	+	three_prime_UTR
3	LOC_Os09g04670	DAG protein, chloroplast precursor, putative, expressed	gene	DAG protein, chloroplast precursor, putative, expressed	chr9	2488758	2492538	-	CDS,three_prime_UTR
3	LOC_Os07g25460	ankyrin repeat domain containing protein, expressed	gene	ankyrin repeat domain containing protein, expressed	chr7	14573503	14579341	-	CDS,three_prime_UTR
3	LOC_Os11g03794	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr11	1490405	1495340	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g09110	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr3	4736700	4740314	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g43930	carrier, putative, expressed	gene	carrier, putative, expressed	chr8	27680292	27681059	+	five_prime_UTR,CDS,promoter,downstream
3	LOC_Os04g49860	DNA2 - Putative DNA replication helicase 2 protein, expressed	gene	DNA2 - Putative DNA replication helicase 2 protein, expressed	chr4	29534414	29544613	+	CDS,downstream
3	LOC_Os08g13640	ankyrin, putative	gene	ankyrin, putative	chr8	8107004	8115148	-	CDS,promoter,downstream
3	LOC_Os03g04980	PHD-finger domain containing protein, putative, expressed	gene	PHD-finger domain containing protein, putative, expressed	chr3	2408857	2412428	+	CDS
3	LOC_Os09g32600	OsFBX334 - F-box domain containing protein, expressed	gene	OsFBX334 - F-box domain containing protein, expressed	chr9	19454454	19457227	-	CDS,promoter,downstream
3	LOC_Os09g25980	glutamate receptor 2.6 precursor, putative	gene	glutamate receptor 2.6 precursor, putative	chr9	15598148	15605591	-	CDS,downstream
3	LOC_Os02g13380	early nodulin 93 ENOD93 protein, putative, expressed	gene	early nodulin 93 ENOD93 protein, putative, expressed	chr2	7135134	7138112	-	CDS,three_prime_UTR
3	LOC_Os04g30420	dehydrogenase, putative, expressed	gene	dehydrogenase, putative, expressed	chr4	17996767	18000081	+	CDS,downstream
3	LOC_Os07g10890	transcription factor, putative, expressed	gene	transcription factor, putative, expressed	chr7	5950436	5954715	+	CDS,three_prime_UTR
3	LOC_Os07g27450	expressed protein	gene	expressed protein	chr7	15989889	15993114	+	three_prime_UTR,downstream
3	LOC_Os03g02020	stress responsive A/B Barrel domain containing protein, expressed	gene	stress responsive A/B Barrel domain containing protein, expressed	chr3	635723	638457	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g51524	expressed protein	gene	expressed protein	chr6	31216637	31218934	-	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os03g20010	nifU, putative, expressed	gene	nifU, putative, expressed	chr3	11270555	11271928	+	three_prime_UTR,downstream
3	LOC_Os10g35380	expressed protein	gene	expressed protein	chr10	18835080	18843887	+	CDS
3	LOC_Os09g25410	expressed protein	gene	expressed protein	chr9	15232372	15235003	+	three_prime_UTR
3	LOC_Os05g51550	DNA binding protein, putative, expressed	gene	DNA binding protein, putative, expressed	chr5	29492138	29497235	-	CDS,three_prime_UTR
3	LOC_Os03g28300	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr3	16281357	16289129	+	CDS,three_prime_UTR
3	LOC_Os06g49890	coiled-coil domain-containing protein 90A, mitochondrial precursor, putative, expressed	gene	coiled-coil domain-containing protein 90A, mitochondrial precursor, putative, expressed	chr6	30201972	30206143	-	CDS
3	LOC_Os01g54960	expressed protein	gene	expressed protein	chr1	31607032	31608670	-	three_prime_UTR,promoter
3	LOC_Os01g04570	Ser/Thr protein kinase, putative, expressed	gene	Ser/Thr protein kinase, putative, expressed	chr1	2047717	2051521	+	CDS
3	LOC_Os02g38800	26S proteasome non-ATPase regulatory subunit 6, putative, expressed	gene	26S proteasome non-ATPase regulatory subunit 6, putative, expressed	chr2	23445846	23448827	+	three_prime_UTR
3	LOC_Os12g21940	expressed protein	gene	expressed protein	chr12	12351717	12354198	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g49350	DUF1645 domain containing protein, putative, expressed	gene	DUF1645 domain containing protein, putative, expressed	chr5	28244409	28245433	+	three_prime_UTR
3	LOC_Os12g25710	bifunctional aminoacyl-tRNA synthetase, putative, expressed	gene	bifunctional aminoacyl-tRNA synthetase, putative, expressed	chr12	14894486	14902028	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g41730	ARID/BRIGHT DNA-binding domain-containing protein, putative, expressed	gene	ARID/BRIGHT DNA-binding domain-containing protein, putative, expressed	chr6	25012594	25018847	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g33190	AMP-binding enzyme, putative, expressed	gene	AMP-binding enzyme, putative, expressed	chr4	19905795	19911112	+	CDS
3	LOC_Os01g52530	phosphoribosyl transferase, putative, expressed	gene	phosphoribosyl transferase, putative, expressed	chr1	30179536	30183432	+	CDS,three_prime_UTR
3	LOC_Os01g08100	flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed	gene	flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed	chr1	3920356	3922134	+	CDS,downstream
3	LOC_Os03g38590	secretory carrier-associated membrane protein 4, putative, expressed	gene	secretory carrier-associated membrane protein 4, putative, expressed	chr3	21414665	21419060	-	CDS,three_prime_UTR
3	LOC_Os05g41450	histone-like transcription factor and archaeal histone, putative, expressed	gene	histone-like transcription factor and archaeal histone, putative, expressed	chr5	24213237	24218129	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g57760	25.3 kDa vesicle transport protein, putative, expressed	gene	25.3 kDa vesicle transport protein, putative, expressed	chr3	32904073	32908028	-	CDS,three_prime_UTR
3	LOC_Os01g43630	adaptin, putative, expressed	gene	adaptin, putative, expressed	chr1	24993688	25001811	+	CDS,downstream
3	LOC_Os11g19220	mitosis protein dim1, putative, expressed	gene	mitosis protein dim1, putative, expressed	chr11	10971767	10976540	-	CDS,three_prime_UTR
3	LOC_Os03g01820	fatty acid hydroxylase, putative, expressed	gene	fatty acid hydroxylase, putative, expressed	chr3	498915	500853	-	three_prime_UTR,promoter
3	LOC_Os02g26740	transposon protein, putative, Pong sub-class	gene	transposon protein, putative, Pong sub-class	chr2	15700031	15704838	+	CDS,promoter
3	LOC_Os03g21270	expressed protein	gene	expressed protein	chr3	12149769	12156323	-	CDS,three_prime_UTR
3	LOC_Os12g36620	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr12	22386197	22393624	-	CDS,downstream
3	LOC_Os02g05730	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr2	2816878	2824131	-	CDS,promoter
3	LOC_Os11g39430	expressed protein	gene	expressed protein	chr11	23001409	23005826	+	five_prime_UTR
3	LOC_Os01g71010	lipase precursor, putative, expressed	gene	lipase precursor, putative, expressed	chr1	41099453	41104013	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g07850	Protein-tyrosine phosphatase domain containing protein, expressed	gene	Protein-tyrosine phosphatase domain containing protein, expressed	chr11	4000708	4008336	-	CDS,promoter
3	LOC_Os08g41400	expressed protein	gene	expressed protein	chr8	26139774	26145166	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g06670	gibberellin 2-oxidase, putative, expressed	gene	gibberellin 2-oxidase, putative, expressed	chr5	3459593	3465968	+	CDS
3	LOC_Os11g08090	expressed protein	gene	expressed protein	chr11	4229362	4239246	+	CDS
3	LOC_Os05g02820	protein transport protein-related, putative, expressed	gene	protein transport protein-related, putative, expressed	chr5	1013970	1017596	-	three_prime_UTR,promoter
3	LOC_Os12g13160	conserved hypothetical protein	gene	conserved hypothetical protein	chr12	7327780	7328511	+	CDS,promoter,downstream
3	LOC_Os05g38260	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr5	22367847	22372616	-	CDS,promoter
3	LOC_Os04g39540	expressed protein	gene	expressed protein	chr4	23358799	23361754	-	CDS
3	LOC_Os05g05790	double-stranded RNA binding motif containing protein, expressed	gene	double-stranded RNA binding motif containing protein, expressed	chr5	2884856	2889451	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g12260	CAPIP1, putative, expressed	gene	CAPIP1, putative, expressed	chr5	7034229	7036696	+	three_prime_UTR
3	LOC_Os01g07490	RST1, putative, expressed	gene	RST1, putative, expressed	chr1	3558732	3573280	-	CDS
3	LOC_Os06g04320	hypothetical protein	gene	hypothetical protein	chr6	1832130	1837026	+	CDS,downstream
3	LOC_Os10g03900	expressed protein	gene	expressed protein	chr10	1769904	1772158	-	CDS,promoter,downstream
3	LOC_Os01g16170	PQ loop repeat domain containing protein, expressed	gene	PQ loop repeat domain containing protein, expressed	chr1	9132519	9139430	-	CDS,three_prime_UTR
3	LOC_Os08g05840	DNA topoisomerase 1, putative, expressed	gene	DNA topoisomerase 1, putative, expressed	chr8	3135747	3141894	+	CDS
3	LOC_Os02g29530	glycosyl transferase 8 domain containing protein, putative, expressed	gene	glycosyl transferase 8 domain containing protein, putative, expressed	chr2	17553347	17556934	-	CDS,three_prime_UTR
3	LOC_Os11g37759	stripe rust resistance protein Yr10, putative, expressed	gene	stripe rust resistance protein Yr10, putative, expressed	chr11	21862838	21867952	+	CDS,three_prime_UTR
3	LOC_Os12g18729	expressed protein	gene	expressed protein	chr12	10819900	10831134	+	CDS
3	LOC_Os10g05800	F-box protein family, AtFBL4, putative, expressed	gene	F-box protein family, AtFBL4, putative, expressed	chr10	2924211	2933174	-	CDS,three_prime_UTR
3	LOC_Os01g51370	expressed protein	gene	expressed protein	chr1	29533212	29535120	-	three_prime_UTR,promoter
3	LOC_Os10g38890	expressed protein	gene	expressed protein	chr10	20647650	20651435	-	CDS,three_prime_UTR
3	LOC_Os07g43810	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr7	26210751	26213029	+	three_prime_UTR
3	LOC_Os05g33260	1-5-phosphoribosyl-5-5-phosphoribosylaminomethylideneaminoimidazole-4-carboxamide isomerase, chloroplast precursor, putative, expressed	gene	1-5-phosphoribosyl-5-5-phosphoribosylaminomethylideneaminoimidazole-4-carboxamide isomerase, chloroplast precursor, putative, expressed	chr5	19428161	19435084	+	CDS,three_prime_UTR,promoter
3	LOC_Os11g26350	hypothetical protein	gene	hypothetical protein	chr11	14615464	14617908	+	CDS
3	LOC_Os05g38150	amino acid kinase, putative, expressed	gene	amino acid kinase, putative, expressed	chr5	22311470	22318480	-	CDS
3	LOC_Os07g40700	RNA methyltransferase, TrmH family protein, putative, expressed	gene	RNA methyltransferase, TrmH family protein, putative, expressed	chr7	24388160	24392598	+	CDS,three_prime_UTR
3	LOC_Os06g37000	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr6	21817245	21822084	+	CDS,three_prime_UTR
3	LOC_Os03g17050	expressed protein	gene	expressed protein	chr3	9479042	9487968	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g50320	ATMAP70 protein, putative, expressed	gene	ATMAP70 protein, putative, expressed	chr2	30714987	30720591	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g62460	ZOS1-16 - C2H2 zinc finger protein, expressed	gene	ZOS1-16 - C2H2 zinc finger protein, expressed	chr1	36157175	36160493	+	CDS,three_prime_UTR
3	LOC_Os01g68200	expressed protein	gene	expressed protein	chr1	39637738	39640232	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g15690	no apical meristem protein, putative, expressed	gene	no apical meristem protein, putative, expressed	chr6	8879072	8883884	+	CDS,three_prime_UTR
3	LOC_Os03g64080	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr3	36200465	36215823	-	CDS
3	LOC_Os03g60700	dolichyl-phosphate beta-glycosyltransferase, putative, expressed	gene	dolichyl-phosphate beta-glycosyltransferase, putative, expressed	chr3	34491023	34494163	-	CDS,three_prime_UTR
3	LOC_Os07g44690	HSF-type DNA-binding domain containing protein, expressed	gene	HSF-type DNA-binding domain containing protein, expressed	chr7	26672645	26675938	+	three_prime_UTR,downstream
3	LOC_Os05g46720	phosphatidylinositol transfer, putative, expressed	gene	phosphatidylinositol transfer, putative, expressed	chr5	26980674	26985924	+	CDS
3	LOC_Os08g38410	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr8	24310631	24316056	-	CDS,three_prime_UTR
3	LOC_Os10g42870	peptide transporter PTR2, putative, expressed	gene	peptide transporter PTR2, putative, expressed	chr10	23043170	23046226	+	CDS
3	LOC_Os02g42960	thylakoid lumenal protein, putative, expressed	gene	thylakoid lumenal protein, putative, expressed	chr2	25849663	25853274	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g12600	NOL1/NOP2/sun family protein, putative, expressed	gene	NOL1/NOP2/sun family protein, putative, expressed	chr2	6582328	6588245	+	CDS
3	LOC_Os06g29310	ulp1 protease family protein, putative, expressed	gene	ulp1 protease family protein, putative, expressed	chr6	16731926	16744664	-	CDS,three_prime_UTR
3	LOC_Os08g05440	NB-ARC domain containing protein	gene	NB-ARC domain containing protein	chr8	2877956	2889637	+	CDS
3	LOC_Os03g21990	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr3	12598185	12604518	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g06880	acyl-CoA synthetase, putative, expressed	gene	acyl-CoA synthetase, putative, expressed	chr11	3370847	3373869	+	three_prime_UTR,downstream
3	LOC_Os04g58420	MLO domain containing protein, putative, expressed	gene	MLO domain containing protein, putative, expressed	chr4	34576111	34578382	+	five_prime_UTR,CDS,promoter
3	LOC_Os10g35720	OsGrx_S17 - glutaredoxin subgroup II, expressed	gene	OsGrx_S17 - glutaredoxin subgroup II, expressed	chr10	19025377	19029162	+	CDS,promoter
3	LOC_Os03g04970	T-complex protein, putative, expressed	gene	T-complex protein, putative, expressed	chr3	2400010	2405756	-	CDS
3	LOC_Os01g12800	peroxisomal membrane protein, putative, expressed	gene	peroxisomal membrane protein, putative, expressed	chr1	7084842	7088194	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g50120	novel plant SNARE 11, putative, expressed	gene	novel plant SNARE 11, putative, expressed	chr6	30356701	30360203	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g18440	expressed protein	gene	expressed protein	chr3	10343860	10354991	+	CDS,three_prime_UTR
3	LOC_Os03g11440	protein transport protein Sec61 subunit alpha, putative, expressed	gene	protein transport protein Sec61 subunit alpha, putative, expressed	chr3	5895033	5898530	+	CDS,three_prime_UTR
3	LOC_Os06g37430	expressed protein	gene	expressed protein	chr6	22128999	22133169	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g20720	CC-NBS-LRR, putative	gene	CC-NBS-LRR, putative	chr1	11525625	11528867	+	CDS,downstream
3	LOC_Os05g05346	expressed protein	gene	expressed protein	chr5	2632311	2635210	+	three_prime_UTR
3	LOC_Os06g30380	GTP binding protein, putative, expressed	gene	GTP binding protein, putative, expressed	chr6	17549092	17552473	+	CDS
3	LOC_Os01g46720	expressed protein	gene	expressed protein	chr1	26610755	26617660	+	CDS
3	LOC_Os03g36439	F-box domain containing protein, expressed	gene	F-box domain containing protein, expressed	chr3	20186957	20189139	-	CDS,downstream
3	LOC_Os05g38590	expressed protein	gene	expressed protein	chr5	22570585	22573567	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g61250	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr1	35435658	35440694	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g30910	transmembrane protein-related, putative, expressed	gene	transmembrane protein-related, putative, expressed	chr10	16050003	16059693	+	CDS
3	LOC_Os01g13060	CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed	gene	CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed	chr1	7264228	7272237	+	CDS,three_prime_UTR
3	LOC_Os10g22950	calmodulin-binding transcription activator, putative, expressed	gene	calmodulin-binding transcription activator, putative, expressed	chr10	11864441	11871723	+	CDS,three_prime_UTR
3	LOC_Os03g37954	expressed protein	gene	expressed protein	chr3	21079871	21080472	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g39906	homeobox domain containing protein, expressed	gene	homeobox domain containing protein, expressed	chr6	23731558	23733539	+	three_prime_UTR
3	LOC_Os07g48640	short-chain dehydrogenase/reductase, putative, expressed	gene	short-chain dehydrogenase/reductase, putative, expressed	chr7	29120764	29123969	+	CDS
3	LOC_Os05g41180	peptidase, T1 family, putative, expressed	gene	peptidase, T1 family, putative, expressed	chr5	24059857	24064096	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g41940	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr5	24497917	24501306	+	three_prime_UTR,downstream
3	LOC_Os05g07220	kelch repeat-containing protein, putative, expressed	gene	kelch repeat-containing protein, putative, expressed	chr5	3813283	3819746	-	CDS
3	LOC_Os12g03730	zinc finger DHHC domain-containing protein, putative	gene	zinc finger DHHC domain-containing protein, putative	chr12	1506770	1513053	+	CDS,downstream
3	LOC_Os04g40520	uncharacterized glycosyltransferase, putative, expressed	gene	uncharacterized glycosyltransferase, putative, expressed	chr4	23882898	23886985	-	CDS,three_prime_UTR
3	LOC_Os11g01836	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr11	444335	446928	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g31000	nascent polypeptide-associated complex subunit alpha, putative, expressed	gene	nascent polypeptide-associated complex subunit alpha, putative, expressed	chr5	17951786	17953904	+	three_prime_UTR
3	LOC_Os08g13014	expressed protein	gene	expressed protein	chr8	7729275	7731707	+	three_prime_UTR
3	LOC_Os06g35020	hypothetical protein	gene	hypothetical protein	chr6	20364074	20369998	+	CDS
3	LOC_Os07g12650	ribosomal protein L7Ae, putative, expressed	gene	ribosomal protein L7Ae, putative, expressed	chr7	7232156	7234202	-	three_prime_UTR,promoter
3	LOC_Os01g11070	Alg9-like mannosyltransferase protein, putative, expressed	gene	Alg9-like mannosyltransferase protein, putative, expressed	chr1	5910503	5915819	+	CDS,three_prime_UTR
3	LOC_Os10g33720	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr10	17723106	17728604	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g65890	DNA repair metallo-beta-lactamase, putative, expressed	gene	DNA repair metallo-beta-lactamase, putative, expressed	chr1	38256898	38260723	+	CDS,downstream
3	LOC_Os02g06584	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	gene	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	chr2	3297208	3304410	+	CDS,three_prime_UTR,promoter
3	LOC_Os07g33780	pleiotropic drug resistance protein 5, putative, expressed	gene	pleiotropic drug resistance protein 5, putative, expressed	chr7	20213032	20217709	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g39250	OsFtsH4  FtsH protease, homologue of AtFtsH4, expressed	gene	OsFtsH4  FtsH protease, homologue of AtFtsH4, expressed	chr1	22073338	22078816	+	CDS
3	LOC_Os03g51270	OsFBX108 - F-box domain containing protein, expressed	gene	OsFBX108 - F-box domain containing protein, expressed	chr3	29321861	29329600	-	CDS
3	LOC_Os12g38760	nucleotide pyrophosphatase/phosphodiesterase, putative, expressed	gene	nucleotide pyrophosphatase/phosphodiesterase, putative, expressed	chr12	23776978	23780816	-	CDS
3	LOC_Os01g74000	glycerol-3-phosphate dehydrogenase, putative, expressed	gene	glycerol-3-phosphate dehydrogenase, putative, expressed	chr1	42859664	42865608	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os08g29720	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr8	18249284	18254852	+	CDS,three_prime_UTR
3	LOC_Os12g10560	clathrin adaptor complex small chain domain containing protein, expressed	gene	clathrin adaptor complex small chain domain containing protein, expressed	chr12	5601155	5605132	+	CDS
3	LOC_Os02g29340	HSF-type DNA-binding domain containing protein, expressed	gene	HSF-type DNA-binding domain containing protein, expressed	chr2	17422157	17425503	+	CDS,three_prime_UTR
3	LOC_Os11g37560	expressed protein	gene	expressed protein	chr11	21709363	21712754	-	CDS
3	LOC_Os03g62660	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr3	35455012	35459259	+	three_prime_UTR,CDS
3	LOC_Os01g21180	translation machinery-associated protein 20, putative, expressed	gene	translation machinery-associated protein 20, putative, expressed	chr1	11811152	11814765	-	CDS,three_prime_UTR
3	LOC_Os07g46060	expressed protein	gene	expressed protein	chr7	27485577	27490154	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g06050	expressed protein	gene	expressed protein	chr1	2891919	2893707	-	CDS,three_prime_UTR
3	LOC_Os07g37220	inositol-1-monophosphatase, putative, expressed	gene	inositol-1-monophosphatase, putative, expressed	chr7	22302867	22307683	-	CDS,three_prime_UTR,downstream
3	LOC_Os07g01310	glutamate receptor, putative, expressed	gene	glutamate receptor, putative, expressed	chr7	190044	196084	+	three_prime_UTR,downstream
3	LOC_Os07g16950	Mak16 protein domain containing protein, expressed	gene	Mak16 protein domain containing protein, expressed	chr7	9971370	9975193	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g41660	CC-NBS-LRR protein, putative, expressed	gene	CC-NBS-LRR protein, putative, expressed	chr6	24937939	24944283	-	CDS,three_prime_UTR,downstream
3	LOC_Os10g34820	CDT1B - Putative DNA replication initiation protein, expressed	gene	CDT1B - Putative DNA replication initiation protein, expressed	chr10	18519728	18524189	+	CDS,three_prime_UTR,promoter
3	LOC_Os09g24850	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr9	14832051	14838542	+	CDS
3	LOC_Os03g12064	expressed protein	gene	expressed protein	chr3	6326286	6334133	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os04g22270	expressed protein	gene	expressed protein	chr4	12600233	12602992	+	three_prime_UTR
3	LOC_Os04g36590	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr4	21921546	21924526	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g12610	DNA polymerase I, putative, expressed	gene	DNA polymerase I, putative, expressed	chr3	6697273	6705866	+	CDS
3	LOC_Os01g49024	phosphatidylserine synthase, putative, expressed	gene	phosphatidylserine synthase, putative, expressed	chr1	28166019	28171519	-	CDS,promoter
3	LOC_Os01g72049	retrotransposon, putative, centromere-specific, expressed	gene	retrotransposon, putative, centromere-specific, expressed	chr1	41780267	41807035	-	CDS,three_prime_UTR
3	LOC_Os07g36450	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr7	21801738	21804286	-	CDS,three_prime_UTR,downstream
3	LOC_Os06g27830	expressed protein	gene	expressed protein	chr6	15759988	15764629	-	CDS
3	LOC_Os08g23110	tRNA synthetase, putative, expressed	gene	tRNA synthetase, putative, expressed	chr8	13917211	13923003	+	CDS,three_prime_UTR
3	LOC_Os10g22570	cellulase, putative, expressed	gene	cellulase, putative, expressed	chr10	11627807	11642373	-	CDS
3	LOC_Os05g13330	per1-like family protein, putative, expressed	gene	per1-like family protein, putative, expressed	chr5	7398418	7403293	-	CDS,three_prime_UTR
3	LOC_Os04g08180	expressed protein	gene	expressed protein	chr4	4344738	4347802	+	CDS,downstream
3	LOC_Os01g03690	TKL_IRAK_DUF26-lg.1 - DUF26 kinases have homology to DUF26 containing loci, expressed	gene	TKL_IRAK_DUF26-lg.1 - DUF26 kinases have homology to DUF26 containing loci, expressed	chr1	1517245	1520644	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os01g57740	expressed protein	gene	expressed protein	chr1	33391366	33395047	+	CDS,three_prime_UTR
3	LOC_Os08g39270	fasciclin domain containing protein, expressed	gene	fasciclin domain containing protein, expressed	chr8	24815594	24817738	-	three_prime_UTR
3	LOC_Os08g37480	mediator of RNA polymerase II transcription subunit 22, putative, expressed	gene	mediator of RNA polymerase II transcription subunit 22, putative, expressed	chr8	23738659	23744313	-	three_prime_UTR
3	LOC_Os04g59570	expressed protein	gene	expressed protein	chr4	35241843	35244533	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g40980	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr5	23960956	23963626	-	three_prime_UTR
3	LOC_Os12g38770	nucleotide pyrophosphatase/phosphodiesterase, putative, expressed	gene	nucleotide pyrophosphatase/phosphodiesterase, putative, expressed	chr12	23785597	23788794	-	CDS,downstream
3	LOC_Os04g20920	H-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed	gene	H-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed	chr4	11734599	11737832	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g39430	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr4	23281983	23286449	-	three_prime_UTR,CDS
3	LOC_Os03g52690	CBS domain containing membrane protein, putative, expressed	gene	CBS domain containing membrane protein, putative, expressed	chr3	30199389	30203475	-	CDS,three_prime_UTR
3	LOC_Os04g45990	histone-lysine N-methyltransferase, putative, expressed	gene	histone-lysine N-methyltransferase, putative, expressed	chr4	27058948	27061661	-	CDS,three_prime_UTR
3	LOC_Os02g02550	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	chr2	924454	926632	+	three_prime_UTR,promoter,downstream
3	LOC_Os05g49650	expressed protein	gene	expressed protein	chr5	28418276	28420260	-	CDS,three_prime_UTR
3	LOC_Os10g34590	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr10	18367084	18370996	-	three_prime_UTR,promoter
3	LOC_Os06g40490	glycosyl hydrolases family 17, putative, expressed	gene	glycosyl hydrolases family 17, putative, expressed	chr6	24126170	24129371	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g39618	conserved hypothetical protein	gene	conserved hypothetical protein	chr11	23132490	23134634	+	CDS,downstream
3	LOC_Os03g45170	amino acid permease, putative, expressed	gene	amino acid permease, putative, expressed	chr3	25502315	25508064	-	CDS
3	LOC_Os02g16040	ubiquitin-conjugating enzyme, putative, expressed	gene	ubiquitin-conjugating enzyme, putative, expressed	chr2	9116012	9119592	+	CDS,three_prime_UTR
3	LOC_Os06g15760	eukaryotic aspartyl protease domain containing protein, expressed	gene	eukaryotic aspartyl protease domain containing protein, expressed	chr6	8954692	8958658	+	CDS,downstream
3	LOC_Os04g49590	regulatory protein, putative, expressed	gene	regulatory protein, putative, expressed	chr4	29392821	29396002	-	CDS,three_prime_UTR,downstream
3	LOC_Os02g22590	expressed protein	gene	expressed protein	chr2	13467706	13470238	-	CDS
3	LOC_Os11g09864	wali7, putative, expressed	gene	wali7, putative, expressed	chr11	5277809	5280451	+	three_prime_UTR
3	LOC_Os10g22410	yippee zinc-binding protein, putative, expressed	gene	yippee zinc-binding protein, putative, expressed	chr10	11525347	11528660	-	three_prime_UTR
3	LOC_Os11g13800	expressed protein	gene	expressed protein	chr11	7580162	7584109	-	CDS,three_prime_UTR,five_prime_UTR
3	LOC_Os03g57790	ubiquitin-conjugating enzyme, putative, expressed	gene	ubiquitin-conjugating enzyme, putative, expressed	chr3	32922681	32928383	-	CDS,three_prime_UTR
3	LOC_Os02g01230	ribosomal protein, putative, expressed	gene	ribosomal protein, putative, expressed	chr2	126771	130189	-	CDS,three_prime_UTR
3	LOC_Os07g08430	indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed	gene	indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed	chr7	4329347	4332643	-	CDS
3	LOC_Os01g55450	CAMK_KIN1/SNF1/Nim1_like.11 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_KIN1/SNF1/Nim1_like.11 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr1	31942484	31947536	-	CDS
3	LOC_Os05g01550	ZOS5-01 - C2H2 zinc finger protein, expressed	gene	ZOS5-01 - C2H2 zinc finger protein, expressed	chr5	321102	324421	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g20490	expressed protein	gene	expressed protein	chr2	12086013	12089348	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g49800	eukaryotic aspartyl protease domain containing protein, expressed	gene	eukaryotic aspartyl protease domain containing protein, expressed	chr2	30432013	30435679	-	CDS
3	LOC_Os07g43430	expressed protein	gene	expressed protein	chr7	26003634	26006627	+	CDS,three_prime_UTR,promoter
3	LOC_Os05g01320	expressed protein	gene	expressed protein	chr5	201957	205756	-	CDS,three_prime_UTR
3	LOC_Os02g49190	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, putative, expressed	gene	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, putative, expressed	chr2	30066068	30069075	+	CDS,three_prime_UTR
3	LOC_Os03g06850	B3 DNA binding domain containing protein, expressed	gene	B3 DNA binding domain containing protein, expressed	chr3	3468649	3470019	+	three_prime_UTR,downstream
3	LOC_Os06g31100	E1-BTB2 - Bric-a-Brac, Tramtrack, and Broad Complex domain with E1 subfamily conserved sequence, expressed	gene	E1-BTB2 - Bric-a-Brac, Tramtrack, and Broad Complex domain with E1 subfamily conserved sequence, expressed	chr6	18079932	18085703	-	CDS,three_prime_UTR
3	LOC_Os01g73130	vacuolar ATP synthase, putative, expressed	gene	vacuolar ATP synthase, putative, expressed	chr1	42416772	42417695	+	CDS,downstream
3	LOC_Os05g30900	lipase precursor, putative, expressed	gene	lipase precursor, putative, expressed	chr5	17881433	17885153	-	CDS
3	LOC_Os06g47800	disease resistance protein RGA3, putative, expressed	gene	disease resistance protein RGA3, putative, expressed	chr6	28925197	28929079	-	CDS
3	LOC_Os03g05180	expressed protein	gene	expressed protein	chr3	2511866	2515230	+	five_prime_UTR,CDS,promoter,downstream
3	LOC_Os06g30930	expressed protein	gene	expressed protein	chr6	17992002	17994417	+	CDS,three_prime_UTR
3	LOC_Os10g41450	mediator of RNA polymerase II transcription subunit 31, putative, expressed	gene	mediator of RNA polymerase II transcription subunit 31, putative, expressed	chr10	22207155	22209840	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g55090	transposon protein, putative, Mutator sub-class, expressed	gene	transposon protein, putative, Mutator sub-class, expressed	chr1	31671151	31675312	-	CDS,three_prime_UTR
3	LOC_Os10g40060	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr10	21382511	21388256	-	CDS,three_prime_UTR,downstream
3	LOC_Os06g34120	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr6	19865073	19869009	-	CDS
3	LOC_Os10g38060	phospholipase D, putative, expressed	gene	phospholipase D, putative, expressed	chr10	20305511	20314576	-	CDS,three_prime_UTR
3	LOC_Os04g56300	expressed protein	gene	expressed protein	chr4	33380696	33383245	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g17520	cytochrome c-type biogenesis protein ccmH precursor, putative, expressed	gene	cytochrome c-type biogenesis protein ccmH precursor, putative, expressed	chr2	10084264	10087920	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g29760	ferrochelatase-2, chloroplast precursor, putative, expressed	gene	ferrochelatase-2, chloroplast precursor, putative, expressed	chr5	17149221	17156417	+	CDS
3	LOC_Os03g17020	GTPase-activating protein, putative, expressed	gene	GTPase-activating protein, putative, expressed	chr3	9453766	9457869	-	CDS,three_prime_UTR
3	LOC_Os07g31550	powdery mildew resistant protein 5, putative, expressed	gene	powdery mildew resistant protein 5, putative, expressed	chr7	18726995	18732575	+	CDS
3	LOC_Os08g16570	expressed protein	gene	expressed protein	chr8	10137594	10140729	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g29050	phospholipase D p1, putative, expressed	gene	phospholipase D p1, putative, expressed	chr5	16991055	17002359	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g46280	expressed protein	gene	expressed protein	chr5	26771772	26772869	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g36780	OsProCP4 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed	gene	OsProCP4 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed	chr10	19615752	19621405	+	CDS,three_prime_UTR
3	LOC_Os06g16980	DNA topoisomerase I family protein, expressed	gene	DNA topoisomerase I family protein, expressed	chr6	9839889	9855981	-	CDS,three_prime_UTR
3	LOC_Os06g46380	rab geranylgeranyl transferase like protein, putative, expressed	gene	rab geranylgeranyl transferase like protein, putative, expressed	chr6	28142874	28147386	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g36080	kinesin motor domain containing protein, expressed	gene	kinesin motor domain containing protein, expressed	chr6	21102639	21109942	+	CDS,downstream
3	LOC_Os04g55720	D-3-phosphoglycerate dehydrogenase, chloroplast precursor, putative, expressed	gene	D-3-phosphoglycerate dehydrogenase, chloroplast precursor, putative, expressed	chr4	32981942	32984831	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g27770	heme oxygenase 2, putative, expressed	gene	heme oxygenase 2, putative, expressed	chr3	15922520	15926081	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g21560	CDK5RAP3, putative, expressed	gene	CDK5RAP3, putative, expressed	chr6	12433085	12436479	+	CDS,three_prime_UTR
3	LOC_Os03g25600	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr3	14654927	14663491	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g38820	expressed protein	gene	expressed protein	chr2	23460100	23462202	-	three_prime_UTR,promoter
3	LOC_Os01g73020	mitochondrial import inner membrane translocase subunit Tim16, putative, expressed	gene	mitochondrial import inner membrane translocase subunit Tim16, putative, expressed	chr1	42360282	42362621	-	CDS,three_prime_UTR
3	LOC_Os02g16450	expressed protein	gene	expressed protein	chr2	9390821	9393827	-	three_prime_UTR
3	LOC_Os07g12570	hypothetical protein	gene	hypothetical protein	chr7	7167649	7170096	-	CDS,promoter
3	LOC_Os09g04790	PAP fibrillin family domain containing protein, expressed	gene	PAP fibrillin family domain containing protein, expressed	chr9	2547874	2551855	+	CDS,three_prime_UTR
3	LOC_Os01g73656	expressed protein	gene	expressed protein	chr1	42671977	42677072	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g43920	auxin response factor 14, putative, expressed	gene	auxin response factor 14, putative, expressed	chr5	25493271	25499212	+	CDS,three_prime_UTR
3	LOC_Os02g35840	expressed protein	gene	expressed protein	chr2	21523733	21526939	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g12238	expressed protein	gene	expressed protein	chr3	6427277	6429590	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g06610	expressed protein	gene	expressed protein	chr6	3110536	3114195	+	CDS,three_prime_UTR
3	LOC_Os03g48390	expressed protein	gene	expressed protein	chr3	27545210	27547289	+	CDS,downstream
3	LOC_Os01g08420	EMB2410, putative, expressed	gene	EMB2410, putative, expressed	chr1	4132703	4139633	+	CDS,three_prime_UTR
3	LOC_Os12g29670	expressed protein	gene	expressed protein	chr12	17688998	17692281	+	CDS
3	LOC_Os05g11980	timeless protein, expressed	gene	timeless protein, expressed	chr5	6843407	6852880	-	CDS
3	LOC_Os06g50818	expressed protein	gene	expressed protein	chr6	30750189	30752742	+	CDS,three_prime_UTR
3	LOC_Os06g22650	VHS and GAT domain containing protein, expressed	gene	VHS and GAT domain containing protein, expressed	chr6	13161902	13170018	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g60390	PHD finger protein, putative, expressed	gene	PHD finger protein, putative, expressed	chr3	34335769	34339615	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g04950	splicing factor 3B subunit 1, putative, expressed	gene	splicing factor 3B subunit 1, putative, expressed	chr2	2318089	2323335	-	three_prime_UTR
3	LOC_Os09g39462	nucleic acid binding protein, putative, expressed	gene	nucleic acid binding protein, putative, expressed	chr9	22682047	22687432	+	three_prime_UTR,downstream
3	LOC_Os01g46570	CTP synthase, putative, expressed	gene	CTP synthase, putative, expressed	chr1	26513499	26520717	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g17350	VHS and GAT domain containing protein, expressed	gene	VHS and GAT domain containing protein, expressed	chr2	9972640	9978097	+	CDS,three_prime_UTR
3	LOC_Os10g02770	glycosyl hydrolases family 16, putative, expressed	gene	glycosyl hydrolases family 16, putative, expressed	chr10	1091765	1095942	-	CDS
3	LOC_Os12g01580	MATE efflux protein, putative, expressed	gene	MATE efflux protein, putative, expressed	chr12	349766	354106	+	CDS,three_prime_UTR
3	LOC_Os08g31030	HOTHEAD precursor, putative, expressed	gene	HOTHEAD precursor, putative, expressed	chr8	19154466	19159139	-	CDS,downstream
3	LOC_Os07g46660	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	gene	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	chr7	27882559	27887249	+	CDS,three_prime_UTR
3	LOC_Os12g35270	expressed protein	gene	expressed protein	chr12	21396181	21398248	-	CDS,three_prime_UTR
3	LOC_Os12g06270	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr12	2981715	2992140	-	CDS
3	LOC_Os10g23120	pyridoxamine 5'-phosphate oxidase family protein, putative, expressed	gene	pyridoxamine 5'-phosphate oxidase family protein, putative, expressed	chr10	11996425	12002475	-	CDS,three_prime_UTR
3	LOC_Os03g60090	methylenetetrahydrofolate reductase, putative, expressed	gene	methylenetetrahydrofolate reductase, putative, expressed	chr3	34160671	34166206	-	CDS,three_prime_UTR
3	LOC_Os08g40919	expressed protein	gene	expressed protein	chr8	25886780	25891186	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g63860	DANA2, putative, expressed	gene	DANA2, putative, expressed	chr3	36067816	36072707	+	CDS,three_prime_UTR
3	LOC_Os12g42970	GATA zinc finger domain containing protein, expressed	gene	GATA zinc finger domain containing protein, expressed	chr12	26659915	26662912	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g39200	expressed protein	gene	expressed protein	chr9	22513025	22516720	-	CDS,three_prime_UTR
3	LOC_Os02g13520	OsIAA7 - Auxin-responsive Aux/IAA gene family member, expressed	gene	OsIAA7 - Auxin-responsive Aux/IAA gene family member, expressed	chr2	7245015	7248672	-	CDS
3	LOC_Os03g21090	auxin-independent growth promoter protein, putative, expressed	gene	auxin-independent growth promoter protein, putative, expressed	chr3	12006909	12011222	-	three_prime_UTR,promoter
3	LOC_Os07g02940	DUF538 domain containing protein, putative, expressed	gene	DUF538 domain containing protein, putative, expressed	chr7	1094057	1094907	-	five_prime_UTR,downstream
3	LOC_Os06g30440	OsGH3.7 - Probable indole-3-acetic acid-amido synthetase, expressed	gene	OsGH3.7 - Probable indole-3-acetic acid-amido synthetase, expressed	chr6	17585902	17589685	-	CDS
3	LOC_Os09g05020	tyrosine phosphatase family protein, putative, expressed	gene	tyrosine phosphatase family protein, putative, expressed	chr9	2696267	2701745	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g40030	S-locus-like receptor protein kinase, putative, expressed	gene	S-locus-like receptor protein kinase, putative, expressed	chr6	23811301	23814107	-	CDS,three_prime_UTR
3	LOC_Os01g37760	glutamate dehydrogenase protein, putative, expressed	gene	glutamate dehydrogenase protein, putative, expressed	chr1	21117849	21123727	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g15640	CRR4, putative, expressed	gene	CRR4, putative, expressed	chr7	9070862	9076796	-	CDS
3	LOC_Os09g39380	monodehydroascorbate reductase, putative, expressed	gene	monodehydroascorbate reductase, putative, expressed	chr9	22644422	22648010	+	CDS,downstream
3	LOC_Os12g12130	verticillium wilt disease resistance protein, putative, expressed	gene	verticillium wilt disease resistance protein, putative, expressed	chr12	6649801	6653129	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g35170	expressed protein	gene	expressed protein	chr4	21201563	21205804	+	CDS,three_prime_UTR
3	LOC_Os11g07260	expressed protein	gene	expressed protein	chr11	3653727	3657372	+	CDS
3	LOC_Os03g17230	NAD dependent epimerase/dehydratase family domain containing protein, expressed	gene	NAD dependent epimerase/dehydratase family domain containing protein, expressed	chr3	9599087	9602489	-	CDS,promoter
3	LOC_Os04g52500	lecithine cholesterol acyltransferase, putative, expressed	gene	lecithine cholesterol acyltransferase, putative, expressed	chr4	31030026	31034506	+	CDS,promoter
3	LOC_Os04g56480	pelota, putative, expressed	gene	pelota, putative, expressed	chr4	33479906	33487850	+	CDS,three_prime_UTR
3	LOC_Os07g25710	myb-like DNA-binding domain containing protein, expressed	gene	myb-like DNA-binding domain containing protein, expressed	chr7	14752760	14758382	+	three_prime_UTR,CDS
3	LOC_Os01g05490	triosephosphate isomerase, cytosolic, putative, expressed	gene	triosephosphate isomerase, cytosolic, putative, expressed	chr1	2588537	2592641	-	CDS,three_prime_UTR
3	LOC_Os05g10630	O-sialoglycoprotein endopeptidase, putative, expressed	gene	O-sialoglycoprotein endopeptidase, putative, expressed	chr5	5791735	5797237	-	CDS,three_prime_UTR
3	LOC_Os07g27930	DNA-directed RNA polymerase subunit, putative, expressed	gene	DNA-directed RNA polymerase subunit, putative, expressed	chr7	16288929	16292453	-	CDS,three_prime_UTR
3	LOC_Os09g15639	expressed protein	gene	expressed protein	chr9	9543293	9545479	+	three_prime_UTR,downstream
3	LOC_Os06g14190	NF-X1-type zinc finger protein, putative, expressed	gene	NF-X1-type zinc finger protein, putative, expressed	chr6	7919480	7923038	-	CDS,three_prime_UTR
3	LOC_Os06g48610	CCT motif family protein, expressed	gene	CCT motif family protein, expressed	chr6	29406746	29411040	+	CDS
3	LOC_Os05g03830	aminotransferase, putative, expressed	gene	aminotransferase, putative, expressed	chr5	1704939	1707093	+	three_prime_UTR,downstream
3	LOC_Os02g42320	peptidase, T1 family, putative, expressed	gene	peptidase, T1 family, putative, expressed	chr2	25448355	25452758	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g19200	OsFBX46 - F-box domain containing protein, expressed	gene	OsFBX46 - F-box domain containing protein, expressed	chr2	11188427	11193872	-	three_prime_UTR
3	LOC_Os01g40820	peptidase family M41 containing protein, expressed	gene	peptidase family M41 containing protein, expressed	chr1	23072535	23078737	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g44330	rho guanine nucleotide exchange factor, putative, expressed	gene	rho guanine nucleotide exchange factor, putative, expressed	chr2	26814534	26817530	+	CDS,three_prime_UTR
3	LOC_Os11g09110	receptor-like protein kinase 5 precursor, putative	gene	receptor-like protein kinase 5 precursor, putative	chr11	4846957	4848840	+	CDS,promoter,downstream
3	LOC_Os11g07970	OsFBW2 - F-box domain and WD40 repeat containing protein, expressed	gene	OsFBW2 - F-box domain and WD40 repeat containing protein, expressed	chr11	4130231	4136381	-	CDS,three_prime_UTR
3	LOC_Os01g41030	ribosomal protein L25, putative, expressed	gene	ribosomal protein L25, putative, expressed	chr1	23233591	23236628	-	CDS,three_prime_UTR
3	LOC_Os05g38400	OsFtsH8  FtsH protease, homologue of AtFtsH3/10, expressed	gene	OsFtsH8  FtsH protease, homologue of AtFtsH3/10, expressed	chr5	22455759	22461629	+	CDS
3	LOC_Os04g44920	oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed	gene	oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed	chr4	26395121	26397818	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g08410	chorismate mutase, chloroplast precursor, putative, expressed	gene	chorismate mutase, chloroplast precursor, putative, expressed	chr2	4486468	4489406	-	CDS,three_prime_UTR
3	LOC_Os04g23849	expressed protein	gene	expressed protein	chr4	13609437	13615765	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g33960	START domain containing protein, expressed	gene	START domain containing protein, expressed	chr10	18014307	18021271	+	CDS
3	LOC_Os03g05280	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr3	2552787	2558223	+	CDS,three_prime_UTR
3	LOC_Os04g32650	tRNA synthetase class II core domain containing protein, expressed	gene	tRNA synthetase class II core domain containing protein, expressed	chr4	19505074	19510221	+	CDS,three_prime_UTR
3	LOC_Os05g36160	G-box-binding factor 4, putative, expressed	gene	G-box-binding factor 4, putative, expressed	chr5	21369898	21373166	+	three_prime_UTR,CDS
3	LOC_Os08g03290	glyceraldehyde-3-phosphate dehydrogenase, putative, expressed	gene	glyceraldehyde-3-phosphate dehydrogenase, putative, expressed	chr8	1524297	1528230	+	CDS,three_prime_UTR
3	LOC_Os05g30130	chaperone protein dnaJ 49, putative, expressed	gene	chaperone protein dnaJ 49, putative, expressed	chr5	17381202	17385570	-	CDS,three_prime_UTR
3	LOC_Os04g43030	lipase class 3 family protein, putative, expressed	gene	lipase class 3 family protein, putative, expressed	chr4	25275107	25283436	+	CDS,three_prime_UTR,promoter
3	LOC_Os07g49210	helicase conserved C-terminal domain containing protein, expressed	gene	helicase conserved C-terminal domain containing protein, expressed	chr7	29464181	29474507	+	CDS
3	LOC_Os12g30555	hypothetical protein	gene	hypothetical protein	chr12	18325419	18327192	+	three_prime_UTR,downstream
3	LOC_Os01g66190	expressed protein	gene	expressed protein	chr1	38446645	38449458	-	three_prime_UTR,promoter
3	LOC_Os05g51660	SCP-like extracellular protein, expressed	gene	SCP-like extracellular protein, expressed	chr5	29562061	29563137	-	three_prime_UTR
3	LOC_Os07g25700	expressed protein	gene	expressed protein	chr7	14740204	14745243	+	three_prime_UTR
3	LOC_Os09g09480	SNF7 domain containing protein, putative, expressed	gene	SNF7 domain containing protein, putative, expressed	chr9	5102023	5105862	+	three_prime_UTR,promoter
3	LOC_Os12g03710	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr12	1496364	1498413	+	three_prime_UTR,downstream
3	LOC_Os02g14900	1,3-beta-glucan synthase component domain containing protein, expressed	gene	1,3-beta-glucan synthase component domain containing protein, expressed	chr2	8299856	8317190	+	CDS,three_prime_UTR
3	LOC_Os05g05310	Fibronectin type III domain containing protein, expressed	gene	Fibronectin type III domain containing protein, expressed	chr5	2611659	2617227	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g01030	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr2	14061	18598	+	three_prime_UTR,CDS
3	LOC_Os07g27120	expressed protein	gene	expressed protein	chr7	15725294	15729128	+	three_prime_UTR,CDS
3	LOC_Os03g31690	GCN5-related N-acetyltransferase, putative, expressed	gene	GCN5-related N-acetyltransferase, putative, expressed	chr3	18086242	18092698	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g01240	mitochondrial substrate carrier family protein, putative, expressed	gene	mitochondrial substrate carrier family protein, putative, expressed	chr12	135205	140120	-	CDS
3	LOC_Os10g06720	aldose 1-epimerase, putative, expressed	gene	aldose 1-epimerase, putative, expressed	chr10	3474519	3477174	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g26160	glutamate receptor, putative, expressed	gene	glutamate receptor, putative, expressed	chr9	15764944	15769860	+	CDS,three_prime_UTR
3	LOC_Os03g49180	alkaline phytoceramidase, putative, expressed	gene	alkaline phytoceramidase, putative, expressed	chr3	28008018	28011928	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g42220	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr2	25393934	25398464	+	CDS,downstream
3	LOC_Os07g46340	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr7	27634521	27637665	+	three_prime_UTR,CDS,downstream
3	LOC_Os02g48130	uncharacterized protein At1g26090, chloroplast precursor, putative, expressed	gene	uncharacterized protein At1g26090, chloroplast precursor, putative, expressed	chr2	29459791	29462204	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g36670	peptidyl-prolyl cis-trans isomerase, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, putative, expressed	chr9	21151255	21153877	+	CDS,three_prime_UTR,promoter
3	LOC_Os09g37000	26S proteasome non-ATPase regulatory subunit 3, putative, expressed	gene	26S proteasome non-ATPase regulatory subunit 3, putative, expressed	chr9	21338280	21341727	-	CDS,three_prime_UTR,downstream
3	LOC_Os02g40510	response regulator receiver domain containing protein, expressed	gene	response regulator receiver domain containing protein, expressed	chr2	24563425	24566691	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g05650	diacylglycerol kinase, putative, expressed	gene	diacylglycerol kinase, putative, expressed	chr8	3016359	3021050	+	CDS,downstream
3	LOC_Os06g41360	phosphoribosyl transferase, putative, expressed	gene	phosphoribosyl transferase, putative, expressed	chr6	24788415	24792568	-	CDS,three_prime_UTR
3	LOC_Os01g07870	ABC transporter family protein, putative, expressed	gene	ABC transporter family protein, putative, expressed	chr1	3803528	3810069	+	CDS,three_prime_UTR
3	LOC_Os01g66320	expressed protein	gene	expressed protein	chr1	38516459	38519216	-	CDS,downstream
3	LOC_Os03g10400	peptidyl-prolyl cis-trans isomerase, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, putative, expressed	chr3	5296334	5300353	-	CDS,three_prime_UTR
3	LOC_Os02g30840	RNA pseudouridine synthase, putative, expressed	gene	RNA pseudouridine synthase, putative, expressed	chr2	18379337	18384794	+	CDS,three_prime_UTR
3	LOC_Os07g38070	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr7	22825914	22830530	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g06300	hypothetical protein	gene	hypothetical protein	chr12	3012312	3014620	+	CDS,downstream
3	LOC_Os01g33800	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr1	18599930	18610529	+	CDS
3	LOC_Os01g04110	mediator of RNA polymerase II transcription subunit 22, putative, expressed	gene	mediator of RNA polymerase II transcription subunit 22, putative, expressed	chr1	1786870	1790498	-	three_prime_UTR,promoter
3	LOC_Os03g08280	peptidase, T1 family, putative, expressed	gene	peptidase, T1 family, putative, expressed	chr3	4209495	4212007	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g02060	expressed protein	gene	expressed protein	chr8	670260	673727	+	CDS,three_prime_UTR
3	LOC_Os02g03070	SSE1, putative, expressed	gene	SSE1, putative, expressed	chr2	1213995	1218060	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g09540	SAC domain containing protein, putative, expressed	gene	SAC domain containing protein, putative, expressed	chr6	4843483	4853760	-	CDS,three_prime_UTR
3	LOC_Os01g36890	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr1	20539784	20546067	+	CDS
3	LOC_Os12g38960	ZOS12-07 - C2H2 zinc finger protein, expressed	gene	ZOS12-07 - C2H2 zinc finger protein, expressed	chr12	23918702	23922532	-	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os02g32350	TUDOR protein with multiple SNc domains, putative, expressed	gene	TUDOR protein with multiple SNc domains, putative, expressed	chr2	19092986	19099665	-	CDS,three_prime_UTR
3	LOC_Os03g08570	amine oxidase, flavin-containing, domain containing protein, expressed	gene	amine oxidase, flavin-containing, domain containing protein, expressed	chr3	4408077	4413805	+	CDS
3	LOC_Os06g06014	expressed protein	gene	expressed protein	chr6	2765129	2769430	-	three_prime_UTR,CDS,downstream
3	LOC_Os03g10410	expressed protein	gene	expressed protein	chr3	5301410	5303767	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g12350	two-component response regulator, putative, expressed	gene	two-component response regulator, putative, expressed	chr3	6511744	6517792	+	CDS,three_prime_UTR
3	LOC_Os03g28330	sucrose synthase, putative, expressed	gene	sucrose synthase, putative, expressed	chr3	16299924	16306279	-	CDS
3	LOC_Os12g43000	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr12	26680941	26684576	-	CDS,three_prime_UTR,five_prime_UTR
3	LOC_Os12g18630	expressed protein	gene	expressed protein	chr12	10754000	10760219	-	CDS,three_prime_UTR
3	LOC_Os03g56970	actin, putative, expressed	gene	actin, putative, expressed	chr3	32437237	32441779	+	CDS,promoter
3	LOC_Os01g60640	OsWRKY21 - Superfamily of TFs having WRKY and zinc finger domains, expressed	gene	OsWRKY21 - Superfamily of TFs having WRKY and zinc finger domains, expressed	chr1	35061691	35063897	+	three_prime_UTR,downstream
3	LOC_Os11g05850	cyclin-T1-3, putative, expressed	gene	cyclin-T1-3, putative, expressed	chr11	2726047	2732553	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os07g43050	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr7	25792526	25796707	+	three_prime_UTR,promoter,downstream
3	LOC_Os11g07930	oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed	gene	oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed	chr11	4093522	4097410	+	CDS
3	LOC_Os10g30600	tyrosine protein kinase domain containing protein, putative, expressed	gene	tyrosine protein kinase domain containing protein, putative, expressed	chr10	15849605	15852767	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g10400	electron transfer flavoprotein subunit beta, putative, expressed	gene	electron transfer flavoprotein subunit beta, putative, expressed	chr4	5632185	5635927	-	CDS
3	LOC_Os03g60240	SCAR-like protein 1, putative, expressed	gene	SCAR-like protein 1, putative, expressed	chr3	34250635	34259757	+	CDS
3	LOC_Os03g04520	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr3	2102185	2111148	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g37490	DNA excision repair protein ERCC-1, putative, expressed	gene	DNA excision repair protein ERCC-1, putative, expressed	chr10	19999216	20002673	-	CDS,promoter
3	LOC_Os01g16620	expressed protein	gene	expressed protein	chr1	9430711	9434933	-	three_prime_UTR,promoter
3	LOC_Os02g53400	thioredoxin, putative, expressed	gene	thioredoxin, putative, expressed	chr2	32678281	32680193	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g07220	bacterial transferase hexapeptide domain containing protein, expressed	gene	bacterial transferase hexapeptide domain containing protein, expressed	chr12	3548123	3551635	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g45280	histidine triad family protein, putative, expressed	gene	histidine triad family protein, putative, expressed	chr4	26567071	26572164	-	CDS,three_prime_UTR
3	LOC_Os01g73470	growth inhibition and differentiation-related protein 88, putative, expressed	gene	growth inhibition and differentiation-related protein 88, putative, expressed	chr1	42573783	42576774	-	CDS,three_prime_UTR
3	LOC_Os01g67240	formin-like protein 1 precursor, putative, expressed	gene	formin-like protein 1 precursor, putative, expressed	chr1	39012716	39016908	-	CDS
3	LOC_Os08g10300	SHR5-receptor-like kinase, putative, expressed	gene	SHR5-receptor-like kinase, putative, expressed	chr8	5997024	6004223	+	CDS
3	LOC_Os03g22880	nucleolar protein 5A, putative, expressed	gene	nucleolar protein 5A, putative, expressed	chr3	13221248	13224194	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g09270	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr8	5383446	5387854	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os10g42710	RCD1, putative, expressed	gene	RCD1, putative, expressed	chr10	22963812	22968187	-	three_prime_UTR,CDS,promoter
3	LOC_Os02g46660	SNARE associated Golgi protein, putative, expressed	gene	SNARE associated Golgi protein, putative, expressed	chr2	28472738	28475487	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g22280	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr2	13304016	13316028	+	three_prime_UTR,CDS
3	LOC_Os11g09474	OsFBX400 - F-box domain containing protein, expressed	gene	OsFBX400 - F-box domain containing protein, expressed	chr11	5076073	5084306	-	CDS,downstream
3	LOC_Os12g41210	tesmin/TSO1-like CXC domain containing protein, expressed	gene	tesmin/TSO1-like CXC domain containing protein, expressed	chr12	25519937	25523784	-	CDS,downstream
3	LOC_Os02g53790	adenylate kinase, putative, expressed	gene	adenylate kinase, putative, expressed	chr2	32945736	32949217	+	CDS,three_prime_UTR,promoter
3	LOC_Os02g18830	ribosome biogenesis protein NEP1, putative, expressed	gene	ribosome biogenesis protein NEP1, putative, expressed	chr2	10990462	10993773	+	CDS,downstream
3	LOC_Os07g26210	non-lysosomal glucosylceramidase, putative, expressed	gene	non-lysosomal glucosylceramidase, putative, expressed	chr7	15068439	15076970	-	five_prime_UTR,CDS
3	LOC_Os03g28270	Leucine Rich Repeat family protein, expressed	gene	Leucine Rich Repeat family protein, expressed	chr3	16255785	16263931	-	CDS
3	LOC_Os08g06230	nucleolar GTP-binding protein 1, putative, expressed	gene	nucleolar GTP-binding protein 1, putative, expressed	chr8	3430844	3437228	-	CDS
3	LOC_Os06g22700	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr6	13199908	13201282	-	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os08g29730	intracellular protein transport protein USO1-related, putative, expressed	gene	intracellular protein transport protein USO1-related, putative, expressed	chr8	18262934	18266841	+	CDS,three_prime_UTR
3	LOC_Os08g28214	tesmin/TSO1-like CXC domain containing protein, expressed	gene	tesmin/TSO1-like CXC domain containing protein, expressed	chr8	17211415	17218535	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g30790	expressed protein	gene	expressed protein	chr4	18235368	18238446	-	three_prime_UTR,CDS,promoter
3	LOC_Os06g11630	OsFBX192 - F-box domain containing protein, expressed	gene	OsFBX192 - F-box domain containing protein, expressed	chr6	6159327	6162686	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g24320	2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed	gene	2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed	chr9	14453725	14456454	-	CDS,promoter
3	LOC_Os12g39980	kinesin motor domain containing protein, putative, expressed	gene	kinesin motor domain containing protein, putative, expressed	chr12	24669639	24685756	-	CDS
3	LOC_Os01g13470	KH domain containing protein, putative, expressed	gene	KH domain containing protein, putative, expressed	chr1	7505213	7510768	+	three_prime_UTR,downstream
3	LOC_Os05g07870	triose phosphate/phosphate translocator, non-green plastid,chloroplast precursor, putative, expressed	gene	triose phosphate/phosphate translocator, non-green plastid,chloroplast precursor, putative, expressed	chr5	4249973	4255013	+	CDS
3	LOC_Os01g06660	thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed	gene	thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed	chr1	3135104	3139217	-	CDS
3	LOC_Os07g07610	RNA polymerase subunit, putative, expressed	gene	RNA polymerase subunit, putative, expressed	chr7	3812969	3816342	-	CDS,downstream
3	LOC_Os04g34330	serine/threonine-protein kinase receptor precursor, putative	gene	serine/threonine-protein kinase receptor precursor, putative	chr4	20618128	20620732	+	CDS,promoter
3	LOC_Os07g46280	Os7bglu26 - beta-mannosidase/glucosidase/exoglucanase, expressed	gene	Os7bglu26 - beta-mannosidase/glucosidase/exoglucanase, expressed	chr7	27614403	27617757	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g13950	NHL repeat-containing protein, putative, expressed	gene	NHL repeat-containing protein, putative, expressed	chr2	7594952	7599871	+	CDS
3	LOC_Os01g54050	histidine-containing phosphotransfer protein, putative, expressed	gene	histidine-containing phosphotransfer protein, putative, expressed	chr1	31090988	31093909	+	five_prime_UTR,CDS
3	LOC_Os06g06160	IQ calmodulin-binding motif domain containing protein, expressed	gene	IQ calmodulin-binding motif domain containing protein, expressed	chr6	2854442	2858562	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g32730	haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed	gene	haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed	chr10	17061924	17066634	-	CDS,three_prime_UTR
3	LOC_Os05g37690	OsFBL23 - F-box domain and LRR containing protein, expressed	gene	OsFBL23 - F-box domain and LRR containing protein, expressed	chr5	21998165	22001307	+	three_prime_UTR,downstream
3	LOC_Os03g51020	expressed protein	gene	expressed protein	chr3	29150993	29158271	-	CDS,three_prime_UTR
3	LOC_Os05g43374	pseudouridylate synthase, putative, expressed	gene	pseudouridylate synthase, putative, expressed	chr5	25157201	25161914	+	three_prime_UTR,downstream
3	LOC_Os10g35800	expressed protein	gene	expressed protein	chr10	19075079	19077142	+	three_prime_UTR,downstream
3	LOC_Os08g38800	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr8	24521847	24526416	+	CDS
3	LOC_Os06g42020	CSLA9 - cellulose synthase-like family A, expressed	gene	CSLA9 - cellulose synthase-like family A, expressed	chr6	25230217	25234901	+	CDS
3	LOC_Os09g32310	expressed protein	gene	expressed protein	chr9	19286443	19289490	+	CDS,promoter
3	LOC_Os06g12390	galactosyltransferase family protein, putative, expressed	gene	galactosyltransferase family protein, putative, expressed	chr6	6714887	6721018	+	CDS,three_prime_UTR
3	LOC_Os01g45970	expressed protein	gene	expressed protein	chr1	26110898	26113146	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g46140	expressed protein	gene	expressed protein	chr5	26699135	26702170	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g30170	F-box protein interaction domain containing protein, expressed	gene	F-box protein interaction domain containing protein, expressed	chr9	18359670	18363012	+	three_prime_UTR
3	LOC_Os02g09770	abhydrolase domain-containing protein FAM108C1, putative, expressed	gene	abhydrolase domain-containing protein FAM108C1, putative, expressed	chr2	5038456	5043326	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g44770	uncharacterized mscS family protein, putative, expressed	gene	uncharacterized mscS family protein, putative, expressed	chr2	27112122	27116571	+	CDS
3	LOC_Os06g50380	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr6	30495475	30500197	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g04120	hypothetical protein	gene	hypothetical protein	chr6	1722576	1724393	+	CDS,promoter,downstream
3	LOC_Os01g59730	ribosomal protein L7Ae, putative, expressed	gene	ribosomal protein L7Ae, putative, expressed	chr1	34549310	34551595	-	three_prime_UTR
3	LOC_Os12g27090	expressed protein	gene	expressed protein	chr12	15855275	15864038	+	CDS
3	LOC_Os03g49210	BRCA1 C Terminus domain containing protein, expressed	gene	BRCA1 C Terminus domain containing protein, expressed	chr3	28022458	28028173	+	CDS,three_prime_UTR
3	LOC_Os12g02100	expressed protein	gene	expressed protein	chr12	631401	637030	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g29510	DUF803 domain containing, putative, expressed	gene	DUF803 domain containing, putative, expressed	chr2	17521680	17533664	+	CDS,three_prime_UTR,five_prime_UTR
3	LOC_Os06g10880	bZIP transcription factor, putative, expressed	gene	bZIP transcription factor, putative, expressed	chr6	5676081	5681127	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g52606	SHR5-receptor-like kinase, putative, expressed	gene	SHR5-receptor-like kinase, putative, expressed	chr4	31100180	31110866	-	CDS,three_prime_UTR
3	LOC_Os02g10160	AGAP003371-PA, putative, expressed	gene	AGAP003371-PA, putative, expressed	chr2	5324531	5328300	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g03530	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr6	1362000	1366576	+	three_prime_UTR
3	LOC_Os08g42410	transketolase, putative, expressed	gene	transketolase, putative, expressed	chr8	26775268	26780585	+	CDS
3	LOC_Os04g09654	O-methyltransferase, putative, expressed	gene	O-methyltransferase, putative, expressed	chr4	5173911	5181951	+	CDS
3	LOC_Os02g17860	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr2	10341827	10347288	+	CDS,promoter
3	LOC_Os02g25060	NTMC2Type1.2 protein, putative, expressed	gene	NTMC2Type1.2 protein, putative, expressed	chr2	14523792	14531678	-	CDS,three_prime_UTR
3	LOC_Os04g52600	SHR5-receptor-like kinase, putative, expressed	gene	SHR5-receptor-like kinase, putative, expressed	chr4	31089360	31097301	-	CDS
3	LOC_Os11g02480	OsWRKY46 - Superfamily of TFs having WRKY and zinc finger domains, expressed	gene	OsWRKY46 - Superfamily of TFs having WRKY and zinc finger domains, expressed	chr11	758588	762335	-	CDS
3	LOC_Os01g72205	proline synthetase co-transcribed bacterial homolog protein, putative, expressed	gene	proline synthetase co-transcribed bacterial homolog protein, putative, expressed	chr1	41866458	41868602	-	CDS,promoter,downstream
3	LOC_Os07g23880	glycosyl hydrolase, family 31, putative, expressed	gene	glycosyl hydrolase, family 31, putative, expressed	chr7	13487282	13500032	+	CDS
3	LOC_Os07g46690	PHD-finger family protein, expressed	gene	PHD-finger family protein, expressed	chr7	27901973	27911216	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g29210	ankyrin, putative, expressed	gene	ankyrin, putative, expressed	chr2	17321695	17329744	-	CDS,three_prime_UTR
3	LOC_Os04g26380	aspartic proteinase-like protein 2 precursor, putative	gene	aspartic proteinase-like protein 2 precursor, putative	chr4	15378849	15379845	-	CDS,downstream
3	LOC_Os07g01940	sister chromatid cohesion 2, putative, expressed	gene	sister chromatid cohesion 2, putative, expressed	chr7	573935	581193	+	CDS
3	LOC_Os03g53080	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr3	30433004	30438158	-	CDS,promoter
3	LOC_Os08g39070	COP9 signalosome complex subunit 6a, putative, expressed	gene	COP9 signalosome complex subunit 6a, putative, expressed	chr8	24678389	24681815	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g08540	expressed protein	gene	expressed protein	chr2	4616827	4622108	+	CDS,three_prime_UTR
3	LOC_Os09g09370	BTBN18 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed	gene	BTBN18 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed	chr9	5020748	5028574	-	five_prime_UTR,CDS,promoter
3	LOC_Os04g34610	expressed protein	gene	expressed protein	chr4	20769409	20776384	-	CDS
3	LOC_Os04g30730	ribosomal protein L29, putative, expressed	gene	ribosomal protein L29, putative, expressed	chr4	18197209	18199218	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os10g25310	SPX domain containing protein, putative, expressed	gene	SPX domain containing protein, putative, expressed	chr10	13017620	13020370	+	three_prime_UTR,downstream
3	LOC_Os11g08950	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr11	4730867	4734761	-	CDS,promoter
3	LOC_Os12g41290	Spc97 / Spc98 family protein, putative, expressed	gene	Spc97 / Spc98 family protein, putative, expressed	chr12	25571379	25577975	+	CDS,three_prime_UTR
3	LOC_Os07g27150	trafficking protein particle complex subunit 4, putative, expressed	gene	trafficking protein particle complex subunit 4, putative, expressed	chr7	15750018	15754979	+	CDS
3	LOC_Os04g36810	LSM domain containing protein, expressed	gene	LSM domain containing protein, expressed	chr4	22038604	22042099	+	CDS,three_prime_UTR
3	LOC_Os02g41590	kinase, pfkB family, putative, expressed	gene	kinase, pfkB family, putative, expressed	chr2	24934577	24940779	-	CDS,three_prime_UTR
3	LOC_Os07g10420	expressed protein	gene	expressed protein	chr7	5597639	5599790	+	CDS,three_prime_UTR
3	LOC_Os10g41000	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr10	21943424	21947576	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g47810	S-locus-like receptor protein kinase, putative, expressed	gene	S-locus-like receptor protein kinase, putative, expressed	chr1	27365273	27367660	-	CDS,promoter
3	LOC_Os10g35840	shikimate/quinate 5-dehydrogenase, putative, expressed	gene	shikimate/quinate 5-dehydrogenase, putative, expressed	chr10	19087649	19091060	-	CDS,three_prime_UTR
3	LOC_Os01g64030	OsFBL5 - F-box domain and LRR containing protein, expressed	gene	OsFBL5 - F-box domain and LRR containing protein, expressed	chr1	37189392	37196761	-	three_prime_UTR
3	LOC_Os01g47530	CGMC_MAPKCMGC_2.6 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	gene	CGMC_MAPKCMGC_2.6 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	chr1	27170243	27177387	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g12400	Homeobox domain containing protein, expressed	gene	Homeobox domain containing protein, expressed	chr6	6724307	6733447	+	CDS,three_prime_UTR
3	LOC_Os08g11480	expressed protein	gene	expressed protein	chr8	6733413	6738691	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g60870	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr3	34585999	34589387	-	CDS,three_prime_UTR
3	LOC_Os07g13590	expressed protein	gene	expressed protein	chr7	7789218	7794055	+	CDS,three_prime_UTR
3	LOC_Os11g32360	expressed protein	gene	expressed protein	chr11	18646347	18650304	-	CDS,three_prime_UTR
3	LOC_Os04g48230	dehydration response related protein, putative, expressed	gene	dehydration response related protein, putative, expressed	chr4	28537347	28542499	-	CDS
3	LOC_Os02g33080	N-carbamoylputrescine amidase, putative, expressed	gene	N-carbamoylputrescine amidase, putative, expressed	chr2	19644045	19647600	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g27960	hydrolase, acting on glycosyl bonds, putative, expressed	gene	hydrolase, acting on glycosyl bonds, putative, expressed	chr5	16255282	16261887	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g20860	ATP11 protein, expressed	gene	ATP11 protein, expressed	chr2	12335370	12338628	-	three_prime_UTR,CDS,downstream
3	LOC_Os01g63270	alpha-glucan phosphorylast isozyme, putative, expressed	gene	alpha-glucan phosphorylast isozyme, putative, expressed	chr1	36669178	36675435	-	CDS,three_prime_UTR
3	LOC_Os06g12150	shikimate kinase, putative, expressed	gene	shikimate kinase, putative, expressed	chr6	6494001	6496911	-	CDS,three_prime_UTR,five_prime_UTR
3	LOC_Os12g05230	ATP-dependent RNA helicase, putative, expressed	gene	ATP-dependent RNA helicase, putative, expressed	chr12	2317843	2320841	+	CDS,three_prime_UTR
3	LOC_Os04g47280	ATFUC1, putative, expressed	gene	ATFUC1, putative, expressed	chr4	27886298	27889460	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g14840	ZOS1-06 - C2H2 zinc finger protein, expressed	gene	ZOS1-06 - C2H2 zinc finger protein, expressed	chr1	8296586	8301407	+	CDS,promoter
3	LOC_Os06g30460	2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed	gene	2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed	chr6	17596789	17608678	-	CDS
3	LOC_Os10g36680	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	gene	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	chr10	19544806	19547124	-	three_prime_UTR
3	LOC_Os07g05580	ribosomal protein L7Ae, putative, expressed	gene	ribosomal protein L7Ae, putative, expressed	chr7	2612932	2615419	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g61890	AT hook motif family protein, expressed	gene	AT hook motif family protein, expressed	chr1	35813036	35819825	-	CDS,three_prime_UTR
3	LOC_Os06g16400	helix-loop-helix DNA-binding domain containing protein, expressed	gene	helix-loop-helix DNA-binding domain containing protein, expressed	chr6	9363051	9367005	+	CDS,three_prime_UTR,five_prime_UTR,downstream
3	LOC_Os12g01760	F-box/LRR domain containing protein, putative, expressed	gene	F-box/LRR domain containing protein, putative, expressed	chr12	463682	467351	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g01570	expressed protein	gene	expressed protein	chr3	355717	358719	-	CDS,three_prime_UTR,downstream
3	LOC_Os04g56730	repressor of RNA polymerase III transcription MAF1, putative, expressed	gene	repressor of RNA polymerase III transcription MAF1, putative, expressed	chr4	33643820	33647432	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g28840	hydrolase, NUDIX family, domain containing protein, expressed	gene	hydrolase, NUDIX family, domain containing protein, expressed	chr8	17632076	17635770	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g35700	STE_MEKK_ste11_MAP3K.16 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	gene	STE_MEKK_ste11_MAP3K.16 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	chr4	21580610	21586712	-	CDS,three_prime_UTR
3	LOC_Os03g38020	mps one binder kinase activator-like 1A, putative, expressed	gene	mps one binder kinase activator-like 1A, putative, expressed	chr3	21107274	21110877	+	CDS,three_prime_UTR
3	LOC_Os03g44670	expressed protein	gene	expressed protein	chr3	25145510	25149623	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g01890	expressed protein	gene	expressed protein	chr11	483798	486701	+	CDS,three_prime_UTR
3	LOC_Os07g33310	MATE efflux family protein, putative, expressed	gene	MATE efflux family protein, putative, expressed	chr7	19910368	19913583	+	CDS
3	LOC_Os05g23670	transcription factor jumonji, putative, expressed	gene	transcription factor jumonji, putative, expressed	chr5	13516404	13522202	-	CDS,three_prime_UTR
3	LOC_Os03g15550	phosphatidylinositol-4-phosphate 5-kinase, putative, expressed	gene	phosphatidylinositol-4-phosphate 5-kinase, putative, expressed	chr3	8557683	8561739	+	CDS
3	LOC_Os04g58620	potasium efflux antiporter protein, putative, expressed	gene	potasium efflux antiporter protein, putative, expressed	chr4	34675251	34684480	-	CDS,downstream
3	LOC_Os03g37320	expressed protein	gene	expressed protein	chr3	20676414	20686901	-	CDS
3	LOC_Os05g04750	OsFBX157 - F-box domain containing protein, expressed	gene	OsFBX157 - F-box domain containing protein, expressed	chr5	2251215	2253015	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g26039	expressed protein	gene	expressed protein	chr1	14753747	14763481	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g02550	CPuORF21 - conserved peptide uORF-containing transcript, expressed	gene	CPuORF21 - conserved peptide uORF-containing transcript, expressed	chr6	884831	891704	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g04260	fatty acid hydroxylase, putative, expressed	gene	fatty acid hydroxylase, putative, expressed	chr1	1887524	1891298	+	three_prime_UTR
3	LOC_Os03g13040	haemolysin-III, putative, expressed	gene	haemolysin-III, putative, expressed	chr3	7045800	7050331	-	CDS
3	LOC_Os08g16120	disease resistance protein RPM1, putative, expressed	gene	disease resistance protein RPM1, putative, expressed	chr8	9823631	9827475	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g29630	NOL1/NOP2/sun family protein, putative, expressed	gene	NOL1/NOP2/sun family protein, putative, expressed	chr9	18012220	18019627	+	CDS
3	LOC_Os08g06060	CGMC_MAPKCMGC_2_ERK.13 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	gene	CGMC_MAPKCMGC_2_ERK.13 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	chr8	3306523	3309593	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g27470	KH domain containing protein, putative, expressed	gene	KH domain containing protein, putative, expressed	chr10	14415899	14421902	+	CDS,three_prime_UTR
3	LOC_Os01g26160	exportin 1, putative, expressed	gene	exportin 1, putative, expressed	chr1	14808650	14821107	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g38310	expressed protein	gene	expressed protein	chr4	22610028	22613661	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g32970	eukaryotic translation initiation factor, putative, expressed	gene	eukaryotic translation initiation factor, putative, expressed	chr10	17186939	17190351	+	CDS
3	LOC_Os03g56420	expressed protein	gene	expressed protein	chr3	32152989	32157106	+	CDS,three_prime_UTR
3	LOC_Os03g18080	SacI homology domain containing protein, expressed	gene	SacI homology domain containing protein, expressed	chr3	10089085	10096809	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g55030	cullin, putative, expressed	gene	cullin, putative, expressed	chr4	32541230	32545655	+	CDS
3	LOC_Os06g04340	expressed protein	gene	expressed protein	chr6	1843954	1847754	-	CDS,three_prime_UTR,downstream
3	LOC_Os12g34990	hydrolase, putative, expressed	gene	hydrolase, putative, expressed	chr12	21259490	21263553	-	three_prime_UTR,promoter
3	LOC_Os03g54770	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr3	31127354	31132597	+	CDS,promoter
3	LOC_Os08g04810	serine esterase family protein, putative, expressed	gene	serine esterase family protein, putative, expressed	chr8	2411057	2417684	-	CDS
3	LOC_Os05g15350	expressed protein	gene	expressed protein	chr5	8688642	8690282	-	CDS,downstream
3	LOC_Os12g08240	hypothetical protein	gene	hypothetical protein	chr12	4202816	4205440	-	CDS,promoter
3	LOC_Os01g48010	expressed protein	gene	expressed protein	chr1	27481762	27485921	+	CDS,three_prime_UTR
3	LOC_Os02g06650	COX VIIa, putative, expressed	gene	COX VIIa, putative, expressed	chr2	3344761	3347428	-	five_prime_UTR,CDS
3	LOC_Os01g04930	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr1	2280534	2284053	-	CDS,three_prime_UTR
3	LOC_Os09g33910	CAMK_CAMK_like.39 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.39 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr9	20015090	20018910	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g01980	AAA family ATPase, putative, expressed	gene	AAA family ATPase, putative, expressed	chr6	549917	554930	+	CDS,three_prime_UTR
3	LOC_Os06g50154	translocon-associated protein subunit alpha precursor, putative, expressed	gene	translocon-associated protein subunit alpha precursor, putative, expressed	chr6	30370095	30373535	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g09880	EMB1270, putative, expressed	gene	EMB1270, putative, expressed	chr6	5028396	5034359	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os10g35920	OsFBX389 - F-box domain containing protein, expressed	gene	OsFBX389 - F-box domain containing protein, expressed	chr10	19118675	19123004	-	CDS
3	LOC_Os01g34930	callose synthase, putative, expressed	gene	callose synthase, putative, expressed	chr1	19302305	19304991	-	CDS
3	LOC_Os01g40650	expressed protein	gene	expressed protein	chr1	22982348	22984744	+	three_prime_UTR,downstream
3	LOC_Os10g33640	AGC_AGC_other_NDRh_TRCd.3 - ACG kinases include homologs to PKA, PKG and PKC, expressed	gene	AGC_AGC_other_NDRh_TRCd.3 - ACG kinases include homologs to PKA, PKG and PKC, expressed	chr10	17661369	17664572	+	CDS,promoter
3	LOC_Os03g26090	GPI-anchored wall transfer protein 1, putative, expressed	gene	GPI-anchored wall transfer protein 1, putative, expressed	chr3	14945292	14952128	+	CDS
3	LOC_Os02g48220	expressed protein	gene	expressed protein	chr2	29517485	29522459	-	five_prime_UTR,CDS
3	LOC_Os02g25960	ankyrin repeat family protein, putative, expressed	gene	ankyrin repeat family protein, putative, expressed	chr2	15227267	15232974	-	CDS
3	LOC_Os01g12470	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr1	6836120	6840269	+	CDS,promoter,downstream
3	LOC_Os03g09140	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr3	4762758	4765371	+	CDS
3	LOC_Os01g62880	oxidoreductase, aldo/keto reductase family protein, putative, expressed	gene	oxidoreductase, aldo/keto reductase family protein, putative, expressed	chr1	36417071	36419412	+	three_prime_UTR,downstream
3	LOC_Os03g57690	aldehyde oxidase, putative	gene	aldehyde oxidase, putative	chr3	32872436	32879136	-	CDS
3	LOC_Os04g51390	aldose 1-epimerase, putative, expressed	gene	aldose 1-epimerase, putative, expressed	chr4	30248076	30253241	+	CDS,three_prime_UTR,promoter
3	LOC_Os02g33320	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr2	19785498	19790343	+	CDS,three_prime_UTR
3	LOC_Os02g43690	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr2	26359955	26364731	+	CDS,three_prime_UTR,five_prime_UTR
3	LOC_Os01g70020	DEK C terminal domain containing protein, expressed	gene	DEK C terminal domain containing protein, expressed	chr1	40500104	40506747	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g04240	succinate dehydrogenase flavoprotein subunit,mitochondrial precursor, putative, expressed	gene	succinate dehydrogenase flavoprotein subunit,mitochondrial precursor, putative, expressed	chr7	1859603	1865557	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g36620	hydrolase, alpha/beta fold family domain containing protein, expressed	gene	hydrolase, alpha/beta fold family domain containing protein, expressed	chr4	21934223	21940043	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g39000	inositol-1-monophosphatase, putative, expressed	gene	inositol-1-monophosphatase, putative, expressed	chr3	21680459	21683561	+	CDS,promoter
3	LOC_Os03g11010	natural resistance-associated macrophage protein, putative, expressed	gene	natural resistance-associated macrophage protein, putative, expressed	chr3	5654093	5658215	-	CDS,three_prime_UTR
3	LOC_Os06g43860	homeobox protein knotted-1, putative, expressed	gene	homeobox protein knotted-1, putative, expressed	chr6	26410491	26413838	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g12680	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr5	7279274	7284612	-	CDS
3	LOC_Os02g14890	expressed protein	gene	expressed protein	chr2	8292471	8293262	+	CDS,three_prime_UTR
3	LOC_Os03g19590	phytochrome B, putative, expressed	gene	phytochrome B, putative, expressed	chr3	11018809	11026946	+	CDS
3	LOC_Os03g61620	expressed protein	gene	expressed protein	chr3	34925220	34930264	+	CDS
3	LOC_Os02g48720	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr2	29816067	29819467	+	CDS,three_prime_UTR
3	LOC_Os12g38210	spotted leaf 11, putative, expressed	gene	spotted leaf 11, putative, expressed	chr12	23434650	23439842	-	CDS,three_prime_UTR
3	LOC_Os07g32530	potassium transporter, putative, expressed	gene	potassium transporter, putative, expressed	chr7	19377446	19385145	-	CDS
3	LOC_Os03g34300	TMS membrane protein/tumour differentially expressed protein, putative, expressed	gene	TMS membrane protein/tumour differentially expressed protein, putative, expressed	chr3	19517381	19524458	-	CDS,three_prime_UTR
3	LOC_Os05g39520	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr5	23128070	23132603	-	CDS,downstream
3	LOC_Os01g49020	expressed protein	gene	expressed protein	chr1	28165360	28166166	-	five_prime_UTR,CDS,promoter,downstream
3	LOC_Os01g60200	expressed protein	gene	expressed protein	chr1	34807140	34811165	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g39290	ruvB-like, putative, expressed	gene	ruvB-like, putative, expressed	chr7	23521453	23524329	+	CDS,three_prime_UTR
3	LOC_Os03g61580	expressed protein	gene	expressed protein	chr3	34911484	34915577	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g13170	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr7	7544491	7549146	+	three_prime_UTR
3	LOC_Os08g42980	la domain containing protein, expressed	gene	la domain containing protein, expressed	chr8	27160888	27166506	+	CDS,three_prime_UTR
3	LOC_Os06g09130	glutamate receptor 2.8 precursor, putative, expressed	gene	glutamate receptor 2.8 precursor, putative, expressed	chr6	4592690	4596979	-	CDS,three_prime_UTR
3	LOC_Os04g51690	glycosyl hydrolase family 47 domain contain protein, expressed	gene	glycosyl hydrolase family 47 domain contain protein, expressed	chr4	30436035	30443247	-	CDS
3	LOC_Os06g02340	OsFBX183 - F-box domain containing protein, expressed	gene	OsFBX183 - F-box domain containing protein, expressed	chr6	778996	781326	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g74190	radical SAM enzyme, putative, expressed	gene	radical SAM enzyme, putative, expressed	chr1	42976101	42978772	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g06320	expressed protein	gene	expressed protein	chr11	3023500	3027797	-	CDS,three_prime_UTR
3	LOC_Os09g04160	expressed protein	gene	expressed protein	chr9	2180578	2186534	-	CDS
3	LOC_Os03g41510	oxidoreductase, aldo/keto reductase family protein, putative, expressed	gene	oxidoreductase, aldo/keto reductase family protein, putative, expressed	chr3	23084715	23088794	+	CDS,three_prime_UTR
3	LOC_Os01g14690	Lg106, putative, expressed	gene	Lg106, putative, expressed	chr1	8211421	8214161	-	CDS
3	LOC_Os05g33550	methyl-binding domain protein MBD, putative, expressed	gene	methyl-binding domain protein MBD, putative, expressed	chr5	19640237	19642450	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g41650	OsFBX392 - F-box domain containing protein, expressed	gene	OsFBX392 - F-box domain containing protein, expressed	chr10	22354101	22356278	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g36100	expressed protein	gene	expressed protein	chr9	20787044	20789982	+	CDS,three_prime_UTR,promoter
3	LOC_Os07g48970	OsPOP17 - Putative Prolyl Oligopeptidase homologue, expressed	gene	OsPOP17 - Putative Prolyl Oligopeptidase homologue, expressed	chr7	29302623	29308391	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g13350	expressed protein	gene	expressed protein	chr8	7938709	7943489	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g05820	kinesin motor domain containing protein, expressed	gene	kinesin motor domain containing protein, expressed	chr3	2912917	2921879	+	CDS,promoter,downstream
3	LOC_Os02g01720	transmembrane protein 120A, putative, expressed	gene	transmembrane protein 120A, putative, expressed	chr2	397365	403540	+	CDS,three_prime_UTR,promoter
3	LOC_Os06g08850	cyclic nucleotide-gated ion channel 14, putative, expressed	gene	cyclic nucleotide-gated ion channel 14, putative, expressed	chr6	4435991	4441873	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g31700	methylisocitrate lyase 2, putative, expressed	gene	methylisocitrate lyase 2, putative, expressed	chr4	18815436	18820975	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g46500	ankyrin repeat domain containing protein, putative, expressed	gene	ankyrin repeat domain containing protein, putative, expressed	chr7	27773795	27776992	-	CDS,three_prime_UTR
3	LOC_Os01g03510	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr1	1412839	1418043	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g39120	expressed protein	gene	expressed protein	chr5	22874747	22878129	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g72430	NADPH quinone oxidoreductase, putative, expressed	gene	NADPH quinone oxidoreductase, putative, expressed	chr1	42002888	42008742	-	three_prime_UTR
3	LOC_Os08g33380	expressed protein	gene	expressed protein	chr8	20814521	20817800	-	CDS,downstream
3	LOC_Os03g15690	phosphate carrier protein, mitochondrial precursor, putative, expressed	gene	phosphate carrier protein, mitochondrial precursor, putative, expressed	chr3	8655325	8658955	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g01740	serine/threonine-protein kinase, putative, expressed	gene	serine/threonine-protein kinase, putative, expressed	chr12	438034	442732	-	CDS,three_prime_UTR
3	LOC_Os07g44630	thymidylate kinase, putative, expressed	gene	thymidylate kinase, putative, expressed	chr7	26630328	26632692	-	CDS,promoter
3	LOC_Os07g09600	vesicle-associated membrane protein, putative, expressed	gene	vesicle-associated membrane protein, putative, expressed	chr7	5094639	5098513	+	CDS,three_prime_UTR
3	LOC_Os01g05940	receptor kinase, putative, expressed	gene	receptor kinase, putative, expressed	chr1	2829325	2835425	+	CDS
3	LOC_Os11g20689	exosome complex exonuclease, putative, expressed	gene	exosome complex exonuclease, putative, expressed	chr11	11974790	11982371	+	CDS
3	LOC_Os05g33890	microtubule associated protein, putative, expressed	gene	microtubule associated protein, putative, expressed	chr5	19926231	19931566	+	CDS,promoter
3	LOC_Os04g32020	2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor, putative, expressed	gene	2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor, putative, expressed	chr4	19003738	19010584	+	CDS,three_prime_UTR
3	LOC_Os07g45330	expressed protein	gene	expressed protein	chr7	27042430	27045153	-	CDS,promoter
3	LOC_Os02g31074	expressed protein	gene	expressed protein	chr2	18563896	18567292	-	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os02g37420	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr2	22593518	22596358	+	three_prime_UTR,downstream
3	LOC_Os01g09370	ankyrin repeat domain-containing protein 28, putative, expressed	gene	ankyrin repeat domain-containing protein 28, putative, expressed	chr1	4760304	4766339	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g56460	mitochondrial glycoprotein, putative, expressed	gene	mitochondrial glycoprotein, putative, expressed	chr1	32537855	32540573	-	three_prime_UTR,promoter
3	LOC_Os01g68060	copine, putative, expressed	gene	copine, putative, expressed	chr1	39564708	39569133	-	CDS,promoter
3	LOC_Os03g11510	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr3	5959793	5963746	-	CDS,three_prime_UTR
3	LOC_Os12g03080	rp3 protein, putative, expressed	gene	rp3 protein, putative, expressed	chr12	1156980	1164291	-	CDS,three_prime_UTR
3	LOC_Os01g54370	dihydropyrimidinase, putative, expressed	gene	dihydropyrimidinase, putative, expressed	chr1	31282642	31286224	+	CDS,three_prime_UTR
3	LOC_Os12g10730	glutathione S-transferase, putative, expressed	gene	glutathione S-transferase, putative, expressed	chr12	5759191	5762706	+	CDS,promoter
3	LOC_Os09g28300	remorin C-terminal domain containing protein, putative, expressed	gene	remorin C-terminal domain containing protein, putative, expressed	chr9	17181866	17187377	+	three_prime_UTR
3	LOC_Os01g72970	DUF630/DUF632 domains containing protein, putative, expressed	gene	DUF630/DUF632 domains containing protein, putative, expressed	chr1	42324779	42328022	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g01360	OsMADS60 - MADS-box family gene with MIKCc type-box, expressed	gene	OsMADS60 - MADS-box family gene with MIKCc type-box, expressed	chr2	205424	207508	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g08400	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	gene	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	chr5	4581308	4584015	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g13370	seven in absentia protein family domain containing protein, expressed	gene	seven in absentia protein family domain containing protein, expressed	chr1	7449837	7452683	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g05570	RNASEH2A - Putative ribonuclease H2 large subunit, expressed	gene	RNASEH2A - Putative ribonuclease H2 large subunit, expressed	chr11	2525648	2528599	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g43340	disease resistance RPP13-like protein 1, putative, expressed	gene	disease resistance RPP13-like protein 1, putative, expressed	chr4	25446696	25451703	-	CDS,three_prime_UTR
3	LOC_Os10g11140	phosphoglucomutase, putative, expressed	gene	phosphoglucomutase, putative, expressed	chr10	6183653	6191173	-	CDS,three_prime_UTR
3	LOC_Os01g22900	neutral/alkaline invertase, putative, expressed	gene	neutral/alkaline invertase, putative, expressed	chr1	12869202	12873238	+	CDS,three_prime_UTR
3	LOC_Os03g32620	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr3	18676584	18681604	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g61120	expressed protein	gene	expressed protein	chr1	35385651	35390570	-	CDS
3	LOC_Os03g62760	expressed protein	gene	expressed protein	chr3	35509420	35510900	-	three_prime_UTR,promoter
3	LOC_Os06g46410	auxin response factor, putative, expressed	gene	auxin response factor, putative, expressed	chr6	28157509	28163561	-	CDS
3	LOC_Os03g17940	phosphatase, putative, expressed	gene	phosphatase, putative, expressed	chr3	9989448	9992243	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g26920	expressed protein	gene	expressed protein	chr1	14992175	14997081	-	CDS
3	LOC_Os01g01970	expressed protein	gene	expressed protein	chr1	523579	527002	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g56400	glutamine synthetase, catalytic domain containing protein, expressed	gene	glutamine synthetase, catalytic domain containing protein, expressed	chr4	33439215	33445978	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g21240	MLA6 protein, putative, expressed	gene	MLA6 protein, putative, expressed	chr1	11854526	11857948	+	CDS,promoter
3	LOC_Os03g50040	phytanoyl-CoA dioxygenase, putative, expressed	gene	phytanoyl-CoA dioxygenase, putative, expressed	chr3	28545002	28548475	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g45720	starch synthase, putative, expressed	gene	starch synthase, putative, expressed	chr5	26423171	26431476	+	three_prime_UTR,CDS
3	LOC_Os12g24050	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr12	13663605	13668467	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g12380	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr12	6814143	6819309	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g72240	uridine 5-monophosphate synthase, putative, expressed	gene	uridine 5-monophosphate synthase, putative, expressed	chr1	41886024	41889807	+	CDS,promoter
3	LOC_Os03g42840	calcineurin B, putative, expressed	gene	calcineurin B, putative, expressed	chr3	23886903	23893655	+	CDS
3	LOC_Os07g41380	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr7	24794143	24798556	-	CDS
3	LOC_Os03g02710	hydroxymethylglutaryl-CoA synthase, putative, expressed	gene	hydroxymethylglutaryl-CoA synthase, putative, expressed	chr3	1014288	1019206	+	CDS
3	LOC_Os10g35540	hydrolase, alpha/beta fold family domain containing protein, expressed	gene	hydrolase, alpha/beta fold family domain containing protein, expressed	chr10	18934379	18936313	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g43940	X8 domain containing protein, expressed	gene	X8 domain containing protein, expressed	chr7	26258213	26262842	-	three_prime_UTR,promoter
3	LOC_Os01g04250	expressed protein	gene	expressed protein	chr1	1875913	1878903	+	CDS
3	LOC_Os04g36058	DUF1771 domain containing protein, putative, expressed	gene	DUF1771 domain containing protein, putative, expressed	chr4	21842162	21845141	+	CDS
3	LOC_Os11g17540	retrotransposon protein, putative, Ty1-copia subclass, expressed	gene	retrotransposon protein, putative, Ty1-copia subclass, expressed	chr11	9767758	9771617	+	CDS,promoter
3	LOC_Os01g41880	hyaluronan/mRNA binding family domain containing protein, expressed	gene	hyaluronan/mRNA binding family domain containing protein, expressed	chr1	23739769	23743951	-	CDS,three_prime_UTR
3	LOC_Os03g49900	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr3	28441867	28449465	-	CDS,three_prime_UTR
3	LOC_Os01g43150	OsFtsH9  FtsH protease, homologue of AtFtsH11, expressed	gene	OsFtsH9  FtsH protease, homologue of AtFtsH11, expressed	chr1	24615059	24622141	-	CDS
3	LOC_Os08g03840	expressed protein	gene	expressed protein	chr8	1832545	1835637	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g37590	1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed	gene	1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed	chr6	22257064	22258548	-	five_prime_UTR,CDS,promoter,downstream
3	LOC_Os05g43130	brix domain-containing protein 1, putative, expressed	gene	brix domain-containing protein 1, putative, expressed	chr5	24978945	24980908	-	three_prime_UTR,promoter
3	LOC_Os01g05560	expressed protein	gene	expressed protein	chr1	2651648	2654639	+	CDS,three_prime_UTR
3	LOC_Os11g14570	expressed protein	gene	expressed protein	chr11	8192667	8196576	-	CDS,three_prime_UTR
3	LOC_Os07g10150	coatomer subunit gamma-2, putative, expressed	gene	coatomer subunit gamma-2, putative, expressed	chr7	5451170	5458558	+	CDS
3	LOC_Os09g21770	ES43 protein, putative, expressed	gene	ES43 protein, putative, expressed	chr9	13180329	13183740	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g38700	transposon protein, putative, Ac/Ds sub-class	gene	transposon protein, putative, Ac/Ds sub-class	chr2	23386480	23390994	-	CDS,downstream
3	LOC_Os02g54080	expressed protein	gene	expressed protein	chr2	33118546	33121766	-	three_prime_UTR,promoter,downstream
3	LOC_Os09g02284	DNA-directed RNA polymerase subunit, putative, expressed	gene	DNA-directed RNA polymerase subunit, putative, expressed	chr9	926068	933087	+	CDS,three_prime_UTR
3	LOC_Os07g35790	TKL_IRAK_DUF26-ld.5 - DUF26 kinases have homology to DUF26 containing loci, expressed	gene	TKL_IRAK_DUF26-ld.5 - DUF26 kinases have homology to DUF26 containing loci, expressed	chr7	21433564	21436678	-	CDS
3	LOC_Os07g36400	expressed protein	gene	expressed protein	chr7	21759612	21763060	+	CDS,three_prime_UTR
3	LOC_Os03g49170	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr3	28001654	28005258	+	CDS,three_prime_UTR
3	LOC_Os06g12940	conserved hypothetical protein	gene	conserved hypothetical protein	chr6	7078678	7081436	-	CDS,promoter
3	LOC_Os11g06890	vacuolar ATP synthase, putative, expressed	gene	vacuolar ATP synthase, putative, expressed	chr11	3373934	3376213	-	three_prime_UTR,promoter
3	LOC_Os01g47650	vacuolar protein sorting-associated protein 16, putative, expressed	gene	vacuolar protein sorting-associated protein 16, putative, expressed	chr1	27256337	27265442	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g54900	phytosulfokine receptor precursor, putative, expressed	gene	phytosulfokine receptor precursor, putative, expressed	chr3	31199969	31205356	-	three_prime_UTR,promoter
3	LOC_Os01g65080	ZOS1-18 - C2H2 zinc finger protein, expressed	gene	ZOS1-18 - C2H2 zinc finger protein, expressed	chr1	37772951	37777593	+	CDS
3	LOC_Os10g32680	expressed protein	gene	expressed protein	chr10	17040775	17044224	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g26610	phosphoglucomutase, putative, expressed	gene	phosphoglucomutase, putative, expressed	chr7	15337920	15350171	+	CDS,three_prime_UTR
3	LOC_Os09g39270	ZOS9-20 - C2H2 zinc finger protein, expressed	gene	ZOS9-20 - C2H2 zinc finger protein, expressed	chr9	22565971	22572226	-	CDS,three_prime_UTR
3	LOC_Os02g46350	GPI transamidase subunit PIG-U domain containing protein, expressed	gene	GPI transamidase subunit PIG-U domain containing protein, expressed	chr2	28246636	28251039	-	CDS,three_prime_UTR
3	LOC_Os01g12180	expressed protein	gene	expressed protein	chr1	6641665	6644196	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g30430	nuclear transport factor 2, putative, expressed	gene	nuclear transport factor 2, putative, expressed	chr4	18000189	18005170	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g42800	kinesin motor domain containing protein, putative, expressed	gene	kinesin motor domain containing protein, putative, expressed	chr11	25309647	25312359	-	CDS
3	LOC_Os03g56740	hypothetical protein	gene	hypothetical protein	chr3	32322054	32327952	-	CDS
3	LOC_Os09g24660	AGAP000554-PA, putative, expressed	gene	AGAP000554-PA, putative, expressed	chr9	14676512	14680201	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g02275	expressed protein	gene	expressed protein	chr2	745924	748174	+	CDS,promoter,downstream
3	LOC_Os07g07020	mediator of RNA polymerase II transcription subunit 31, putative, expressed	gene	mediator of RNA polymerase II transcription subunit 31, putative, expressed	chr7	3458832	3461755	+	CDS,three_prime_UTR
3	LOC_Os09g31482	splicing factor U2AF, putative, expressed	gene	splicing factor U2AF, putative, expressed	chr9	18984507	18986209	+	three_prime_UTR,downstream
3	LOC_Os03g50560	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr3	28862118	28866317	-	CDS,three_prime_UTR
3	LOC_Os04g40860	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr4	24058758	24062611	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g39240	expressed protein	gene	expressed protein	chr4	23145984	23151800	-	CDS
3	LOC_Os06g47320	T-complex protein, putative, expressed	gene	T-complex protein, putative, expressed	chr6	28681054	28686080	-	CDS
3	LOC_Os02g26800	expressed protein	gene	expressed protein	chr2	15723235	15726667	+	CDS
3	LOC_Os05g32140	NAD dependent epimerase/dehydratase family protein, putative, expressed	gene	NAD dependent epimerase/dehydratase family protein, putative, expressed	chr5	18676080	18679443	+	three_prime_UTR
3	LOC_Os06g39520	myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed	gene	myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed	chr6	23466237	23470696	+	CDS,three_prime_UTR
3	LOC_Os08g02670	ATP binding protein, putative, expressed	gene	ATP binding protein, putative, expressed	chr8	1110279	1114788	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g24860	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr3	14152561	14157891	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g31460	GTPase of unknown function domain containing protein, putative, expressed	gene	GTPase of unknown function domain containing protein, putative, expressed	chr8	19453724	19457729	+	CDS,three_prime_UTR
3	LOC_Os01g11960	histone-lysine N-methyltransferase ATX5, putative, expressed	gene	histone-lysine N-methyltransferase ATX5, putative, expressed	chr1	6517127	6520046	-	CDS,three_prime_UTR
3	LOC_Os09g12750	Myb-like DNA-binding domain containing protein, putative, expressed	gene	Myb-like DNA-binding domain containing protein, putative, expressed	chr9	7315075	7321324	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os01g72710	expressed protein	gene	expressed protein	chr1	42189240	42193026	+	CDS,three_prime_UTR
3	LOC_Os05g22370	N-acetylglucosaminyl transferase component, putative, expressed	gene	N-acetylglucosaminyl transferase component, putative, expressed	chr5	12618080	12629068	-	CDS,three_prime_UTR
3	LOC_Os02g50850	BAH domain containing protein, putative, expressed	gene	BAH domain containing protein, putative, expressed	chr2	31072266	31078068	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g40180	serine/threonine-protein kinase stt7, chloroplast precursor, putative, expressed	gene	serine/threonine-protein kinase stt7, chloroplast precursor, putative, expressed	chr5	23535608	23540384	+	CDS
3	LOC_Os01g43370	CPuORF17 - conserved peptide uORF-containing transcript, expressed	gene	CPuORF17 - conserved peptide uORF-containing transcript, expressed	chr1	24807470	24812359	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g68960	conserved hypothetical protein	gene	conserved hypothetical protein	chr1	40066778	40068562	+	CDS,downstream
3	LOC_Os12g02150	expressed protein	gene	expressed protein	chr12	655057	657437	+	CDS,three_prime_UTR
3	LOC_Os01g16060	expressed protein	gene	expressed protein	chr1	9040580	9045087	-	five_prime_UTR
3	LOC_Os01g52090	transcription factor like protein, putative, expressed	gene	transcription factor like protein, putative, expressed	chr1	29948995	29951599	-	three_prime_UTR
3	LOC_Os04g24170	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr4	13812305	13820931	-	CDS,three_prime_UTR
3	LOC_Os10g39620	ubiquitin family protein, putative, expressed	gene	ubiquitin family protein, putative, expressed	chr10	21097813	21103066	-	three_prime_UTR,CDS
3	LOC_Os05g11780	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr5	6696354	6700452	+	CDS
3	LOC_Os04g51130	expressed protein	gene	expressed protein	chr4	30097208	30099482	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os12g37390	expressed protein	gene	expressed protein	chr12	22918164	22920442	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os08g14450	RNA polymerase sigma factor, putative, expressed	gene	RNA polymerase sigma factor, putative, expressed	chr8	8676959	8680994	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g32274	30S ribosomal protein S16, putative, expressed	gene	30S ribosomal protein S16, putative, expressed	chr9	19265555	19267271	+	three_prime_UTR,promoter,downstream
3	LOC_Os06g40570	GRAM and C2 domains containing protein, putative, expressed	gene	GRAM and C2 domains containing protein, putative, expressed	chr6	24185968	24191936	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os10g36810	plus-3 domain containing protein, putative, expressed	gene	plus-3 domain containing protein, putative, expressed	chr10	19632244	19642072	+	CDS,three_prime_UTR
3	LOC_Os05g27110	expressed protein	gene	expressed protein	chr5	15718238	15721342	-	three_prime_UTR
3	LOC_Os05g06650	expressed protein	gene	expressed protein	chr5	3434445	3438299	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g39560	OTU-like cysteine protease family protein, putative, expressed	gene	OTU-like cysteine protease family protein, putative, expressed	chr8	25020601	25023672	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g26902	chaperone protein dnaJ, putative, expressed	gene	chaperone protein dnaJ, putative, expressed	chr5	15560184	15565145	-	CDS,three_prime_UTR
3	LOC_Os02g20844	expressed protein	gene	expressed protein	chr2	12320247	12324027	+	three_prime_UTR
3	LOC_Os12g01190	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr12	104920	111633	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g53680	RPA1A - Putative single-stranded DNA binding complex subunit 1, expressed	gene	RPA1A - Putative single-stranded DNA binding complex subunit 1, expressed	chr2	32826963	32830612	-	CDS,promoter
3	LOC_Os03g43860	SNF7 domain containing protein, putative, expressed	gene	SNF7 domain containing protein, putative, expressed	chr3	24594867	24598455	-	CDS,promoter
3	LOC_Os03g06580	MTN26L2 - MtN26 family protein precursor, expressed	gene	MTN26L2 - MtN26 family protein precursor, expressed	chr3	3313735	3316425	+	CDS,three_prime_UTR
3	LOC_Os03g58820	aminoacyl-tRNA synthetase, putative, expressed	gene	aminoacyl-tRNA synthetase, putative, expressed	chr3	33488859	33493341	-	CDS,promoter,downstream
3	LOC_Os01g54810	lipase, putative, expressed	gene	lipase, putative, expressed	chr1	31523004	31526133	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g29770	endoglucanase, putative, expressed	gene	endoglucanase, putative, expressed	chr8	18302651	18307244	+	CDS,three_prime_UTR
3	LOC_Os01g20900	OsWAK4 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed	gene	OsWAK4 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed	chr1	11676457	11684281	+	CDS,three_prime_UTR
3	LOC_Os07g33921	60S ribosomal protein L44, putative, expressed	gene	60S ribosomal protein L44, putative, expressed	chr7	20285051	20292898	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g07080	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	gene	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	chr3	3615603	3621204	+	three_prime_UTR,downstream
3	LOC_Os11g10000	mTERF family protein, expressed	gene	mTERF family protein, expressed	chr11	5358938	5360708	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g65650	receptor-like protein kinase HAIKU2 precursor, putative, expressed	gene	receptor-like protein kinase HAIKU2 precursor, putative, expressed	chr1	38111023	38117677	+	CDS
3	LOC_Os05g15370	ribosomal protein L13, putative, expressed	gene	ribosomal protein L13, putative, expressed	chr5	8697446	8703937	-	CDS
3	LOC_Os12g29520	auxin response factor, putative, expressed	gene	auxin response factor, putative, expressed	chr12	17565492	17571851	-	CDS,three_prime_UTR
3	LOC_Os01g57560	serine/threonine-protein kinase receptor precursor, putative, expressed	gene	serine/threonine-protein kinase receptor precursor, putative, expressed	chr1	33247831	33255669	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g01054	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr8	35030	45123	+	three_prime_UTR
3	LOC_Os10g41240	dual specificity protein phosphatase, putative, expressed	gene	dual specificity protein phosphatase, putative, expressed	chr10	22089536	22093538	-	CDS,three_prime_UTR
3	LOC_Os07g03130	PDV2, putative, expressed	gene	PDV2, putative, expressed	chr7	1198188	1200376	-	CDS,three_prime_UTR
3	LOC_Os03g31026	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr3	17673015	17676856	+	CDS,three_prime_UTR,promoter
3	LOC_Os05g33050	ABTB1 - Armadillo repeats with a Bric-a-Brac, Tramtrack, Broad Complex BTB domain, expressed	gene	ABTB1 - Armadillo repeats with a Bric-a-Brac, Tramtrack, Broad Complex BTB domain, expressed	chr5	19305972	19315030	-	CDS
3	LOC_Os03g02790	hypothetical protein	gene	hypothetical protein	chr3	1081189	1085370	+	CDS
3	LOC_Os08g44240	AAA-type ATPase family protein, putative, expressed	gene	AAA-type ATPase family protein, putative, expressed	chr8	27846329	27853532	+	CDS,three_prime_UTR
3	LOC_Os03g46710	expressed protein	gene	expressed protein	chr3	26426268	26431858	+	CDS
3	LOC_Os05g11710	ribosomal protein L5, putative, expressed	gene	ribosomal protein L5, putative, expressed	chr5	6649489	6651860	+	CDS,three_prime_UTR,promoter
3	LOC_Os10g36260	expressed protein	gene	expressed protein	chr10	19308321	19310588	+	CDS,three_prime_UTR
3	LOC_Os04g45920	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr4	27009209	27011888	-	three_prime_UTR,promoter
3	LOC_Os01g07610	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr1	3660688	3663319	+	CDS,three_prime_UTR
3	LOC_Os01g59800	EAP30/Vps36 family domain containing protein, expressed	gene	EAP30/Vps36 family domain containing protein, expressed	chr1	34582472	34586130	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g36040	rhodanese-like domain containing protein, putative, expressed	gene	rhodanese-like domain containing protein, putative, expressed	chr9	20751248	20754168	+	CDS,three_prime_UTR
3	LOC_Os01g12304	esterase, putative, expressed	gene	esterase, putative, expressed	chr1	6717349	6718948	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g07350	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr1	3466858	3471117	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g07280	disease resistance protein, putative, expressed	gene	disease resistance protein, putative, expressed	chr1	3430606	3434618	-	CDS
3	LOC_Os11g09010	lipase, putative, expressed	gene	lipase, putative, expressed	chr11	4781030	4785296	+	CDS,three_prime_UTR
3	LOC_Os04g45090	cytochrome b561, putative, expressed	gene	cytochrome b561, putative, expressed	chr4	26489218	26491604	-	three_prime_UTR,promoter
3	LOC_Os01g59930	NADH-cytochrome b5 reductase, putative, expressed	gene	NADH-cytochrome b5 reductase, putative, expressed	chr1	34651031	34654445	-	CDS,three_prime_UTR
3	LOC_Os03g62510	amine oxidase, flavin-containing, domain containing protein, expressed	gene	amine oxidase, flavin-containing, domain containing protein, expressed	chr3	35385799	35390986	-	CDS
3	LOC_Os01g22070	transposon protein, putative, Mutator sub-class	gene	transposon protein, putative, Mutator sub-class	chr1	12392996	12396181	+	CDS,downstream
3	LOC_Os11g16430	diphthamide biosynthesis protein, putative, expressed	gene	diphthamide biosynthesis protein, putative, expressed	chr11	9084111	9089760	+	CDS,three_prime_UTR
3	LOC_Os01g07170	HORMA domain containing protein, putative, expressed	gene	HORMA domain containing protein, putative, expressed	chr1	3385907	3389756	-	CDS
3	LOC_Os08g09750	OsFBL44 - F-box domain and LRR containing protein, expressed	gene	OsFBL44 - F-box domain and LRR containing protein, expressed	chr8	5632349	5635367	+	CDS,promoter,downstream
3	LOC_Os07g29640	expressed protein	gene	expressed protein	chr7	17425388	17428434	-	CDS,three_prime_UTR
3	LOC_Os01g52810	expressed protein	gene	expressed protein	chr1	30380055	30382348	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os03g53310	emp24/gp25L/p24 family protein, putative, expressed	gene	emp24/gp25L/p24 family protein, putative, expressed	chr3	30589271	30592440	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g08260	HD domain containing protein 2, putative, expressed	gene	HD domain containing protein 2, putative, expressed	chr2	4384185	4388039	+	CDS
3	LOC_Os08g42700	resistance protein, putative, expressed	gene	resistance protein, putative, expressed	chr8	26986950	26994937	+	CDS
3	LOC_Os02g39640	expressed protein	gene	expressed protein	chr2	23908574	23910341	+	CDS,promoter,downstream
3	LOC_Os06g48640	proteasome/cyclosome repeat containing protein, expressed	gene	proteasome/cyclosome repeat containing protein, expressed	chr6	29422025	29430648	-	CDS,three_prime_UTR
3	LOC_Os05g46290	T-complex protein, putative, expressed	gene	T-complex protein, putative, expressed	chr5	26773029	26777672	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g25180	zinc finger, C3HC4 type family protein, expressed	gene	zinc finger, C3HC4 type family protein, expressed	chr5	14530436	14536343	-	CDS,three_prime_UTR
3	LOC_Os08g41090	peroxidase precursor, putative, expressed	gene	peroxidase precursor, putative, expressed	chr8	25969050	25972254	-	CDS
3	LOC_Os10g36060	protein transport protein-related, putative, expressed	gene	protein transport protein-related, putative, expressed	chr10	19204656	19210051	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g22620	endonuclease/Exonuclease/phosphatase family protein, expressed	gene	endonuclease/Exonuclease/phosphatase family protein, expressed	chr12	12777781	12781676	+	CDS
3	LOC_Os11g41150	nitrilase-associated protein, putative, expressed	gene	nitrilase-associated protein, putative, expressed	chr11	24185783	24187022	-	three_prime_UTR,promoter
3	LOC_Os02g05420	expressed protein	gene	expressed protein	chr2	2607097	2611379	+	CDS,downstream
3	LOC_Os06g22660	EMB1303, putative, expressed	gene	EMB1303, putative, expressed	chr6	13176538	13180743	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g42840	expressed protein	gene	expressed protein	chr12	26584635	26588175	+	three_prime_UTR,promoter,downstream
3	LOC_Os04g40540	protein-L-isoaspartate O-methyltransferase, putative, expressed	gene	protein-L-isoaspartate O-methyltransferase, putative, expressed	chr4	23890072	23892461	-	CDS,promoter
3	LOC_Os12g12120	verticillium wilt disease resistance protein precursor, putative, expressed	gene	verticillium wilt disease resistance protein precursor, putative, expressed	chr12	6646206	6649502	+	CDS,downstream
3	LOC_Os11g18770	PHD-finger family protein, expressed	gene	PHD-finger family protein, expressed	chr11	10642907	10651800	-	CDS,promoter
3	LOC_Os02g51430	SEC6, putative, expressed	gene	SEC6, putative, expressed	chr2	31495149	31506573	-	CDS,three_prime_UTR
3	LOC_Os09g39970	conserved hypothetical protein	gene	conserved hypothetical protein	chr9	22916723	22925111	+	CDS,downstream
3	LOC_Os01g54020	tRNA synthetase, putative, expressed	gene	tRNA synthetase, putative, expressed	chr1	31069122	31075235	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g07590	universal stress protein domain containing protein, putative, expressed	gene	universal stress protein domain containing protein, putative, expressed	chr1	3644587	3649362	+	CDS,downstream
3	LOC_Os01g01510	sas10/Utp3 family protein, expressed	gene	sas10/Utp3 family protein, expressed	chr1	260504	267471	+	CDS
3	LOC_Os09g32690	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr9	19502940	19506575	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os12g37564	hypothetical protein	gene	hypothetical protein	chr12	23020782	23022025	+	CDS,promoter,downstream
3	LOC_Os01g13100	KH domain containing protein, putative, expressed	gene	KH domain containing protein, putative, expressed	chr1	7286907	7293276	+	CDS,three_prime_UTR
3	LOC_Os10g30300	TRM112, putative, expressed	gene	TRM112, putative, expressed	chr10	15666351	15669549	+	CDS,three_prime_UTR
3	LOC_Os11g08370	transporter, major facilitator family, putative, expressed	gene	transporter, major facilitator family, putative, expressed	chr11	4409142	4411772	+	CDS
3	LOC_Os09g30180	OsFBX331 - F-box domain containing protein, expressed	gene	OsFBX331 - F-box domain containing protein, expressed	chr9	18363570	18367258	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g35800	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	gene	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	chr4	21645444	21651773	-	three_prime_UTR
3	LOC_Os11g01530	ferritin-1, chloroplast precursor, putative, expressed	gene	ferritin-1, chloroplast precursor, putative, expressed	chr11	303969	306933	-	CDS,three_prime_UTR
3	LOC_Os09g12550	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr9	7188540	7195751	+	CDS,three_prime_UTR,promoter
3	LOC_Os08g27090	ribosomal protein S17, putative, expressed	gene	ribosomal protein S17, putative, expressed	chr8	16543723	16547937	-	CDS,three_prime_UTR
3	LOC_Os06g41790	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr6	25053772	25057854	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g03590	EMB1379, putative, expressed	gene	EMB1379, putative, expressed	chr11	1391724	1393980	+	CDS
3	LOC_Os05g14940	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr5	8478766	8482735	-	CDS,promoter
3	LOC_Os04g54500	POLGAMMA2, putative, expressed	gene	POLGAMMA2, putative, expressed	chr4	32233254	32238888	+	CDS
3	LOC_Os03g22900	SNF2 family N-terminal domain containing protein, expressed	gene	SNF2 family N-terminal domain containing protein, expressed	chr3	13235401	13246616	+	CDS,three_prime_UTR
3	LOC_Os08g42310	expressed protein	gene	expressed protein	chr8	26705187	26709766	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os03g24580	transmembrane protein 85, putative, expressed	gene	transmembrane protein 85, putative, expressed	chr3	13999200	14002702	-	three_prime_UTR,CDS
3	LOC_Os09g38960	potassium transporter, putative, expressed	gene	potassium transporter, putative, expressed	chr9	22366890	22373139	-	CDS,three_prime_UTR
3	LOC_Os06g48950	auxin response factor 19, putative, expressed	gene	auxin response factor 19, putative, expressed	chr6	29655971	29664197	+	CDS,downstream
3	LOC_Os03g10500	adenylyl-sulfate kinase, putative, expressed	gene	adenylyl-sulfate kinase, putative, expressed	chr3	5340101	5346082	-	CDS,downstream
3	LOC_Os08g28740	conserved hypothetical protein	gene	conserved hypothetical protein	chr8	17578393	17580417	-	CDS,promoter
3	LOC_Os10g03830	expressed protein	gene	expressed protein	chr10	1728188	1739122	-	CDS
3	LOC_Os01g48960	glutamate synthase, chloroplast precursor, putative, expressed	gene	glutamate synthase, chloroplast precursor, putative, expressed	chr1	28090164	28101886	-	CDS
3	LOC_Os03g21840	reticulon domain containing protein, putative, expressed	gene	reticulon domain containing protein, putative, expressed	chr3	12479454	12481816	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g05810	glycine-rich protein, putative, expressed	gene	glycine-rich protein, putative, expressed	chr7	2793109	2796363	+	three_prime_UTR
3	LOC_Os05g01050	DNA-binding protein-related, putative, expressed	gene	DNA-binding protein-related, putative, expressed	chr5	71040	73337	-	CDS,three_prime_UTR
3	LOC_Os07g02950	expressed protein	gene	expressed protein	chr7	1095376	1100697	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os11g16290	NIN, putative, expressed	gene	NIN, putative, expressed	chr11	8964687	8972048	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g08230	WAX2, putative, expressed	gene	WAX2, putative, expressed	chr2	4355042	4362385	-	CDS
3	LOC_Os03g08140	tubulin--tyrosine ligase-like protein 12, putative, expressed	gene	tubulin--tyrosine ligase-like protein 12, putative, expressed	chr3	4149738	4156421	+	CDS,three_prime_UTR
3	LOC_Os01g60000	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr1	34684658	34688702	-	CDS,promoter
3	LOC_Os04g59060	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr4	34943467	34947490	-	CDS,three_prime_UTR
3	LOC_Os07g39450	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	23631880	23632418	+	CDS,promoter,downstream
3	LOC_Os01g62080	serine/threonine-protein kinase AFC1, putative, expressed	gene	serine/threonine-protein kinase AFC1, putative, expressed	chr1	35922757	35928936	-	three_prime_UTR
3	LOC_Os03g06740	glutathione reductase, putative, expressed	gene	glutathione reductase, putative, expressed	chr3	3426539	3431268	+	CDS,three_prime_UTR,promoter
3	LOC_Os05g37220	conserved hypothetical protein	gene	conserved hypothetical protein	chr5	21697286	21698020	+	CDS,promoter
3	LOC_Os01g06490	OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed	gene	OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed	chr1	3053465	3056198	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g07932	flavonol synthase/flavanone 3-hydroxylase, putative, expressed	gene	flavonol synthase/flavanone 3-hydroxylase, putative, expressed	chr6	3853647	3856394	+	CDS
3	LOC_Os12g34340	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr12	20780843	20782893	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g43710	cytochrome P450 72A1, putative, expressed	gene	cytochrome P450 72A1, putative, expressed	chr1	25044132	25048370	-	CDS
3	LOC_Os01g54580	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr1	31393788	31399047	+	CDS,three_prime_UTR
3	LOC_Os01g68440	expressed protein	gene	expressed protein	chr1	39772048	39775744	+	five_prime_UTR,CDS
3	LOC_Os01g49290	WD repeat-containing protein, putative, expressed	gene	WD repeat-containing protein, putative, expressed	chr1	28329756	28332348	+	CDS,three_prime_UTR
3	LOC_Os07g26440	expressed protein	gene	expressed protein	chr7	15203082	15210478	-	CDS,three_prime_UTR
3	LOC_Os06g45300	serine/threonine-protein kinase HT1, putative, expressed	gene	serine/threonine-protein kinase HT1, putative, expressed	chr6	27383225	27385862	+	three_prime_UTR,downstream
3	LOC_Os07g10250	DEAD-box ATP-dependent RNA helicase 52B, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase 52B, putative, expressed	chr7	5499196	5505491	-	CDS,three_prime_UTR
3	LOC_Os12g07050	RNA polymerase II subunit A C-terminal domain phosphatase ssu72, putative, expressed	gene	RNA polymerase II subunit A C-terminal domain phosphatase ssu72, putative, expressed	chr12	3449066	3453059	-	CDS,three_prime_UTR
3	LOC_Os07g42160	HD domain containing protein, putative, expressed	gene	HD domain containing protein, putative, expressed	chr7	25225237	25228386	-	CDS,promoter
3	LOC_Os06g35900	BES1/BZR1 homolog protein, putative, expressed	gene	BES1/BZR1 homolog protein, putative, expressed	chr6	20940123	20943278	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g51500	expressed protein	gene	expressed protein	chr6	31203031	31205390	-	CDS,three_prime_UTR
3	LOC_Os11g40590	DUF1399 containing protein, putative, expressed	gene	DUF1399 containing protein, putative, expressed	chr11	23751295	23758310	-	CDS,downstream
3	LOC_Os04g58550	acyl-CoA-binding domain-containing protein 6, putative, expressed	gene	acyl-CoA-binding domain-containing protein 6, putative, expressed	chr4	34625370	34628418	-	CDS,three_prime_UTR
3	LOC_Os08g42390	glycerophosphoryl diester phosphodiesterase family protein, putative, expressed	gene	glycerophosphoryl diester phosphodiesterase family protein, putative, expressed	chr8	26748656	26751850	+	CDS,promoter
3	LOC_Os05g40160	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr5	23524189	23527821	+	CDS,promoter
3	LOC_Os03g19520	cyclin-related protein, putative, expressed	gene	cyclin-related protein, putative, expressed	chr3	10969481	10978196	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g39420	nucleobase-ascorbate transporter, putative, expressed	gene	nucleobase-ascorbate transporter, putative, expressed	chr12	24212477	24218820	+	CDS,three_prime_UTR
3	LOC_Os04g54740	expressed protein	gene	expressed protein	chr4	32367291	32371233	+	three_prime_UTR,downstream
3	LOC_Os12g35320	RING finger and CHY zinc finger domain-containing protein 1, putative, expressed	gene	RING finger and CHY zinc finger domain-containing protein 1, putative, expressed	chr12	21422848	21426505	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g42020	expressed protein	gene	expressed protein	chr2	25236542	25250617	-	five_prime_UTR,CDS
3	LOC_Os03g11410	mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed	gene	mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed	chr3	5869149	5873816	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g02300	receptor kinase ORK10, putative, expressed	gene	receptor kinase ORK10, putative, expressed	chr1	722693	725321	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g58160	heat stress transcription factor, putative, expressed	gene	heat stress transcription factor, putative, expressed	chr3	33098698	33101961	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g67580	multidrug resistance-associated protein, putative, expressed	gene	multidrug resistance-associated protein, putative, expressed	chr1	39274814	39281841	-	CDS
3	LOC_Os01g11110	14-3-3 protein, putative, expressed	gene	14-3-3 protein, putative, expressed	chr1	5920735	5933197	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g02650	expressed protein	gene	expressed protein	chr5	926435	934274	+	CDS,three_prime_UTR,promoter
3	LOC_Os08g07280	expressed protein	gene	expressed protein	chr8	4064652	4068285	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g05510	GATA transcription factor 25, putative, expressed	gene	GATA transcription factor 25, putative, expressed	chr2	2664368	2668168	+	CDS,three_prime_UTR,promoter
3	LOC_Os06g04130	lung seven transmembrane domain containing protein, putative, expressed	gene	lung seven transmembrane domain containing protein, putative, expressed	chr6	1724314	1728997	-	three_prime_UTR,promoter,downstream
3	LOC_Os07g24090	mTERF domain containing protein, expressed	gene	mTERF domain containing protein, expressed	chr7	13653022	13654848	-	CDS,three_prime_UTR
3	LOC_Os08g23930	ENT domain containing protein, expressed	gene	ENT domain containing protein, expressed	chr8	14473196	14479568	+	CDS,three_prime_UTR
3	LOC_Os05g44800	expressed protein	gene	expressed protein	chr5	25987294	25990123	+	three_prime_UTR,downstream
3	LOC_Os05g50510	CAS1 domain-containing protein 1 precursor, putative, expressed	gene	CAS1 domain-containing protein 1 precursor, putative, expressed	chr5	28897580	28903311	-	CDS
3	LOC_Os09g39740	ACT domain containing protein, expressed	gene	ACT domain containing protein, expressed	chr9	22792734	22797447	-	five_prime_UTR,CDS
3	LOC_Os11g01074	RNase P subunit p30, putative, expressed	gene	RNase P subunit p30, putative, expressed	chr11	34928	43608	+	CDS,three_prime_UTR
3	LOC_Os10g32870	L11 domain containing ribosomal protein, putative, expressed	gene	L11 domain containing ribosomal protein, putative, expressed	chr10	17130568	17131035	-	CDS,promoter,downstream
3	LOC_Os03g02170	transmembrane and coiled-coil domain-containing protein 4, putative, expressed	gene	transmembrane and coiled-coil domain-containing protein 4, putative, expressed	chr3	720111	724293	-	CDS,promoter
3	LOC_Os09g33530	expressed protein	gene	expressed protein	chr9	19774809	19780195	-	CDS,promoter
3	LOC_Os01g71200	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr1	41192307	41197933	+	CDS,three_prime_UTR
3	LOC_Os06g10230	receptor-like protein kinase 5 precursor, putative, expressed	gene	receptor-like protein kinase 5 precursor, putative, expressed	chr6	5243240	5250844	-	CDS
3	LOC_Os04g43540	ribosomal protein L14, putative, expressed	gene	ribosomal protein L14, putative, expressed	chr4	25565993	25568250	-	CDS,three_prime_UTR
3	LOC_Os04g53660	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr4	31792129	31796051	-	CDS,three_prime_UTR,downstream
3	LOC_Os04g25390	expressed protein	gene	expressed protein	chr4	14686299	14693478	-	five_prime_UTR,downstream
3	LOC_Os10g41940	expressed protein	gene	expressed protein	chr10	22486820	22490359	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g39060	CRS1/YhbY domain containing protein, expressed	gene	CRS1/YhbY domain containing protein, expressed	chr4	23027000	23032942	-	CDS,three_prime_UTR
3	LOC_Os04g54440	RNA binding protein, putative, expressed	gene	RNA binding protein, putative, expressed	chr4	32203329	32207377	-	three_prime_UTR
3	LOC_Os04g55360	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	gene	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	chr4	32748040	32752097	-	CDS,three_prime_UTR
3	LOC_Os10g34480	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr10	18318534	18322955	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g40150	DNA repair protein Rad51, putative, expressed	gene	DNA repair protein Rad51, putative, expressed	chr11	23476554	23480467	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g54920	expressed protein	gene	expressed protein	chr3	31213554	31216611	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g68450	expressed protein	gene	expressed protein	chr1	39776705	39778894	+	CDS,promoter
3	LOC_Os01g29469	dual specificity protein phosphatase, putative, expressed	gene	dual specificity protein phosphatase, putative, expressed	chr1	16510500	16517634	-	CDS
3	LOC_Os03g15430	Ser/Thr protein phosphatase family protein, putative, expressed	gene	Ser/Thr protein phosphatase family protein, putative, expressed	chr3	8436299	8440908	-	CDS
3	LOC_Os06g35410	growth regulator related protein, putative, expressed	gene	growth regulator related protein, putative, expressed	chr6	20634350	20638707	-	CDS
3	LOC_Os06g47290	growth regulator related protein, putative, expressed	gene	growth regulator related protein, putative, expressed	chr6	28657266	28661112	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g33559	proline-rich family protein, putative, expressed	gene	proline-rich family protein, putative, expressed	chr9	19795711	19798297	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g40250	expressed protein	gene	expressed protein	chr8	25458899	25465421	+	CDS,three_prime_UTR
3	LOC_Os09g32930	retrotransposon protein, putative, SINE subclass, expressed	gene	retrotransposon protein, putative, SINE subclass, expressed	chr9	19620213	19628287	+	CDS
3	LOC_Os02g06180	phytosulfokine receptor precursor, putative, expressed	gene	phytosulfokine receptor precursor, putative, expressed	chr2	3084913	3087072	-	CDS
3	LOC_Os05g05740	proline synthetase co-transcribed bacterial homolog protein, putative, expressed	gene	proline synthetase co-transcribed bacterial homolog protein, putative, expressed	chr5	2862652	2865741	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g32060	expressed protein	gene	expressed protein	chr5	18618228	18622927	+	CDS,three_prime_UTR
3	LOC_Os10g33650	CK1_CaseinKinase_1.9 - CK1 includes the casein kinase 1 kinases, expressed	gene	CK1_CaseinKinase_1.9 - CK1 includes the casein kinase 1 kinases, expressed	chr10	17667975	17673340	+	CDS
3	LOC_Os03g09280	gibberellin response modulator protein, putative, expressed	gene	gibberellin response modulator protein, putative, expressed	chr3	4846123	4852834	+	CDS,three_prime_UTR
3	LOC_Os03g20170	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr3	11394700	11397713	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g42160	F-box/LRR-repeat protein 3, putative, expressed	gene	F-box/LRR-repeat protein 3, putative, expressed	chr11	24928010	24933143	+	CDS
3	LOC_Os06g40080	heme oxygenase 1, putative, expressed	gene	heme oxygenase 1, putative, expressed	chr6	23852717	23857064	-	CDS
3	LOC_Os09g16714	expressed protein	gene	expressed protein	chr9	10226831	10227830	+	three_prime_UTR
3	LOC_Os04g53720	SNF2 family N-terminal domain containing protein, expressed	gene	SNF2 family N-terminal domain containing protein, expressed	chr4	31824369	31831300	-	CDS
3	LOC_Os02g46260	OsSCP9 - Putative Serine Carboxypeptidase homologue, expressed	gene	OsSCP9 - Putative Serine Carboxypeptidase homologue, expressed	chr2	28206197	28211408	+	CDS
3	LOC_Os10g39810	fatty acid hydroxylase, putative, expressed	gene	fatty acid hydroxylase, putative, expressed	chr10	21236931	21239894	+	three_prime_UTR,CDS,downstream
3	LOC_Os03g14020	AGAP009131-PA, putative, expressed	gene	AGAP009131-PA, putative, expressed	chr3	7602005	7606547	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g45180	NBS-LRR disease resistance protein, putative	gene	NBS-LRR disease resistance protein, putative	chr11	26870415	26873510	+	CDS
3	LOC_Os07g37250	THYLAKOID FORMATION1, chloroplast precursor, putative, expressed	gene	THYLAKOID FORMATION1, chloroplast precursor, putative, expressed	chr7	22318014	22322198	-	CDS
3	LOC_Os05g49740	EMB2744, putative, expressed	gene	EMB2744, putative, expressed	chr5	28471506	28474280	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g58520	green ripe-like, putative, expressed	gene	green ripe-like, putative, expressed	chr3	33317873	33320158	+	CDS,three_prime_UTR
3	LOC_Os04g51792	PAP fibrillin family domain containing protein, expressed	gene	PAP fibrillin family domain containing protein, expressed	chr4	30502972	30504665	-	three_prime_UTR,promoter,downstream
3	LOC_Os02g13990	U2 small nuclear ribonucleoprotein A, putative, expressed	gene	U2 small nuclear ribonucleoprotein A, putative, expressed	chr2	7630852	7635244	-	CDS,three_prime_UTR
3	LOC_Os06g37440	elongation factor 1-gamma, putative, expressed	gene	elongation factor 1-gamma, putative, expressed	chr6	22134549	22138445	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g02680	nuclear factor related to kappa-B-binding protein, related, putative, expressed	gene	nuclear factor related to kappa-B-binding protein, related, putative, expressed	chr5	947753	952251	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g36340	lymphoid organ expressed yellow head virus receptor protein, putative, expressed	gene	lymphoid organ expressed yellow head virus receptor protein, putative, expressed	chr11	20947473	20951616	+	CDS,three_prime_UTR
3	LOC_Os01g10080	expressed protein	gene	expressed protein	chr1	5257256	5260017	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g01744	expressed protein	gene	expressed protein	chr12	448486	451252	+	three_prime_UTR,downstream
3	LOC_Os02g02910	expressed protein	gene	expressed protein	chr2	1126021	1132616	-	CDS
3	LOC_Os11g10760	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr11	5903702	5907695	-	CDS
3	LOC_Os01g02170	expressed protein	gene	expressed protein	chr1	633011	638309	-	three_prime_UTR,downstream
3	LOC_Os11g18170	glutathione peroxidase, putative, expressed	gene	glutathione peroxidase, putative, expressed	chr11	10224842	10227511	-	CDS
3	LOC_Os01g28680	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr1	16045623	16055242	+	CDS,three_prime_UTR
3	LOC_Os01g42380	pleiotropic drug resistance protein, putative, expressed	gene	pleiotropic drug resistance protein, putative, expressed	chr1	24074021	24081137	-	CDS
3	LOC_Os05g28860	3'-5' exonuclease, putative, expressed	gene	3'-5' exonuclease, putative, expressed	chr5	16858564	16864661	+	CDS,three_prime_UTR
3	LOC_Os11g44910	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr11	26707707	26712446	-	CDS,three_prime_UTR
3	LOC_Os02g57270	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr2	35080218	35084790	-	CDS
3	LOC_Os06g10210	expressed protein	gene	expressed protein	chr6	5226417	5230646	+	CDS,three_prime_UTR
3	LOC_Os01g58530	NB-ARC/LRR disease resistance protein, putative, expressed	gene	NB-ARC/LRR disease resistance protein, putative, expressed	chr1	33820262	33827853	+	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os08g15230	heat shock protein-related, putative, expressed	gene	heat shock protein-related, putative, expressed	chr8	9223165	9227114	-	CDS,three_prime_UTR
3	LOC_Os03g50870	expressed protein	gene	expressed protein	chr3	29058045	29060712	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g15120	hydrolase, alpha/beta fold family domain containing protein, expressed	gene	hydrolase, alpha/beta fold family domain containing protein, expressed	chr1	8485472	8488700	+	CDS,three_prime_UTR
3	LOC_Os01g50460	nodulin MtN3 family protein, putative, expressed	gene	nodulin MtN3 family protein, putative, expressed	chr1	28974518	28976309	+	three_prime_UTR,downstream
3	LOC_Os01g03144	white-brown complex homolog protein 7, putative, expressed	gene	white-brown complex homolog protein 7, putative, expressed	chr1	1221905	1229507	-	CDS,three_prime_UTR
3	LOC_Os09g17620	ubiquitin domain-containing protein 2, putative, expressed	gene	ubiquitin domain-containing protein 2, putative, expressed	chr9	10768546	10771860	-	three_prime_UTR,promoter
3	LOC_Os08g09710	OsFBX271 - F-box domain containing protein, expressed	gene	OsFBX271 - F-box domain containing protein, expressed	chr8	5608253	5611378	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g11430	GRAM domain containing protein, expressed	gene	GRAM domain containing protein, expressed	chr6	6031411	6034430	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g47410	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr2	28933874	28942548	-	CDS,promoter
3	LOC_Os01g34620	OsGrx_S15.1 - glutaredoxin subgroup II, expressed	gene	OsGrx_S15.1 - glutaredoxin subgroup II, expressed	chr1	19088864	19093259	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g06170	expressed protein	gene	expressed protein	chr2	3080516	3082867	+	three_prime_UTR
3	LOC_Os06g07120	dehydrodolichyl diphosphate synthase, putative, expressed	gene	dehydrodolichyl diphosphate synthase, putative, expressed	chr6	3404165	3406738	+	three_prime_UTR,downstream
3	LOC_Os05g41620	expressed protein	gene	expressed protein	chr5	24312396	24314258	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os06g43790	transcription initiation factor TFIID subunit 1, putative, expressed	gene	transcription initiation factor TFIID subunit 1, putative, expressed	chr6	26359284	26373493	-	CDS,promoter,downstream
3	LOC_Os02g03840	expressed protein	gene	expressed protein	chr2	1617326	1630169	+	CDS,downstream
3	LOC_Os03g60430	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr3	34351063	34355204	+	CDS
3	LOC_Os02g07820	DUF581 domain containing protein, expressed	gene	DUF581 domain containing protein, expressed	chr2	4095627	4098078	+	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g20840	disease resistance RPP13-like protein 1, putative, expressed	gene	disease resistance RPP13-like protein 1, putative, expressed	chr3	11796783	11800763	-	CDS,three_prime_UTR
3	LOC_Os11g17530	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr11	9762646	9766930	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g39040	expressed protein	gene	expressed protein	chr8	24666600	24668562	+	CDS,promoter
3	LOC_Os11g19730	expressed protein	gene	expressed protein	chr11	11367635	11370972	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g57920	OsFBX154 - F-box domain containing protein, expressed	gene	OsFBX154 - F-box domain containing protein, expressed	chr4	34320610	34328229	-	CDS,downstream
3	LOC_Os01g05010	mitochondrial glycoprotein, putative, expressed	gene	mitochondrial glycoprotein, putative, expressed	chr1	2356769	2359444	-	CDS,three_prime_UTR
3	LOC_Os03g53190	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	gene	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	chr3	30506745	30509561	+	CDS,three_prime_UTR
3	LOC_Os04g52390	potassium transporter, putative, expressed	gene	potassium transporter, putative, expressed	chr4	30943165	30948307	-	CDS,three_prime_UTR
3	LOC_Os06g23460	KH domain containing protein, putative, expressed	gene	KH domain containing protein, putative, expressed	chr6	13689554	13696927	-	CDS
3	LOC_Os06g02540	expressed protein	gene	expressed protein	chr6	875843	879536	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g39810	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr8	25191869	25199977	-	CDS
3	LOC_Os01g55730	AGAP003732-PA, putative, expressed	gene	AGAP003732-PA, putative, expressed	chr1	32090520	32093097	-	CDS,three_prime_UTR
3	LOC_Os02g51500	membrane-anchored ubiquitin-fold protein, putative, expressed	gene	membrane-anchored ubiquitin-fold protein, putative, expressed	chr2	31529438	31532904	-	CDS,three_prime_UTR
3	LOC_Os12g36810	polygalacturonase, putative, expressed	gene	polygalacturonase, putative, expressed	chr12	22539245	22542728	+	CDS
3	LOC_Os02g50290	RING zinc finger protein, putative, expressed	gene	RING zinc finger protein, putative, expressed	chr2	30696093	30697767	-	three_prime_UTR,promoter
3	LOC_Os07g47420	60S ribosome subunit biogenesis protein NIP7, putative, expressed	gene	60S ribosome subunit biogenesis protein NIP7, putative, expressed	chr7	28351546	28353776	+	three_prime_UTR,downstream
3	LOC_Os01g66240	mitochondrion protein, putative, expressed	gene	mitochondrion protein, putative, expressed	chr1	38474574	38479747	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g02310	expressed protein	gene	expressed protein	chr1	727977	729930	+	CDS,downstream
3	LOC_Os08g20000	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr8	11973697	11980934	+	CDS
3	LOC_Os03g06654	flavin monooxygenase, putative, expressed	gene	flavin monooxygenase, putative, expressed	chr3	3354037	3359481	+	five_prime_UTR
3	LOC_Os10g02814	G-protein alpha subunit, putative, expressed	gene	G-protein alpha subunit, putative, expressed	chr10	1125704	1130461	+	CDS
3	LOC_Os02g40010	phosphoribosyl transferase, putative, expressed	gene	phosphoribosyl transferase, putative, expressed	chr2	24217436	24222897	+	CDS
3	LOC_Os03g13750	erwinia induced protein 2, putative, expressed	gene	erwinia induced protein 2, putative, expressed	chr3	7444928	7448549	-	CDS,three_prime_UTR
3	LOC_Os02g01800	receptor-like protein kinase precursor, putative	gene	receptor-like protein kinase precursor, putative	chr2	442288	446000	+	CDS,promoter
3	LOC_Os02g44970	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	27232788	27234851	-	CDS,promoter
3	LOC_Os04g14760	phosphoglycerate mutase, putative, expressed	gene	phosphoglycerate mutase, putative, expressed	chr4	8275556	8280545	-	CDS
3	LOC_Os02g53994	DUF1771 domain containing protein, putative, expressed	gene	DUF1771 domain containing protein, putative, expressed	chr2	33064634	33065959	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g54759	expressed protein	gene	expressed protein	chr4	32371765	32380296	-	CDS,promoter
3	LOC_Os11g39540	14-3-3 protein, putative, expressed	gene	14-3-3 protein, putative, expressed	chr11	23087430	23092334	-	CDS,promoter
3	LOC_Os03g46390	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr3	26232232	26238782	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g05400	IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed	gene	IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed	chr6	2436788	2438691	-	CDS,promoter
3	LOC_Os07g22700	tim44-like domain containing protein, expressed	gene	tim44-like domain containing protein, expressed	chr7	12782978	12789423	-	CDS,three_prime_UTR
3	LOC_Os01g52450	hexokinase, putative, expressed	gene	hexokinase, putative, expressed	chr1	30130303	30134242	+	CDS,three_prime_UTR
3	LOC_Os05g50550	polyprenyl synthetase, putative, expressed	gene	polyprenyl synthetase, putative, expressed	chr5	28921963	28925369	+	CDS,three_prime_UTR
3	LOC_Os09g14610	DCL2, putative, expressed	gene	DCL2, putative, expressed	chr9	8645682	8654251	-	CDS,three_prime_UTR,five_prime_UTR,promoter
3	LOC_Os04g52970	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr4	31367964	31373304	+	CDS,downstream
3	LOC_Os12g29990	O-sialoglycoprotein endopeptidase, putative, expressed	gene	O-sialoglycoprotein endopeptidase, putative, expressed	chr12	17895953	17903128	-	CDS,three_prime_UTR
3	LOC_Os04g38530	aldose 1-epimerase, putative, expressed	gene	aldose 1-epimerase, putative, expressed	chr4	22708650	22713542	+	CDS,promoter
3	LOC_Os08g40570	pyridoxamine 5'-phosphate oxidase family protein, putative, expressed	gene	pyridoxamine 5'-phosphate oxidase family protein, putative, expressed	chr8	25680715	25683808	-	CDS,three_prime_UTR,downstream
3	LOC_Os08g02040	expressed protein	gene	expressed protein	chr8	657503	660608	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g38230	peptidase M50 family protein, putative, expressed	gene	peptidase M50 family protein, putative, expressed	chr3	21222506	21224446	-	three_prime_UTR,promoter
3	LOC_Os02g04640	Myb-like DNA-binding domain containing protein, putative, expressed	gene	Myb-like DNA-binding domain containing protein, putative, expressed	chr2	2075496	2079149	-	CDS
3	LOC_Os08g44430	vesicle-associated membrane protein 727, putative, expressed	gene	vesicle-associated membrane protein 727, putative, expressed	chr8	27953586	27956266	-	CDS,three_prime_UTR,downstream
3	LOC_Os06g07630	26S protease regulatory subunit 6A, putative, expressed	gene	26S protease regulatory subunit 6A, putative, expressed	chr6	3688673	3693343	+	CDS,three_prime_UTR,promoter
3	LOC_Os02g54760	cyclic nucleotide-gated ion channel 14, putative, expressed	gene	cyclic nucleotide-gated ion channel 14, putative, expressed	chr2	33524718	33530257	-	CDS,three_prime_UTR
3	LOC_Os09g19570	AGAP009532-PA, putative, expressed	gene	AGAP009532-PA, putative, expressed	chr9	11706234	11709472	+	CDS,downstream
3	LOC_Os09g32580	expressed protein	gene	expressed protein	chr9	19444861	19447779	-	CDS,three_prime_UTR
3	LOC_Os04g02754	amidase family protein, putative, expressed	gene	amidase family protein, putative, expressed	chr4	1050160	1066505	+	CDS,promoter
3	LOC_Os04g32950	calreticulin precursor protein, putative, expressed	gene	calreticulin precursor protein, putative, expressed	chr4	19741264	19744785	-	CDS,three_prime_UTR
3	LOC_Os04g53030	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr4	31392777	31398767	+	CDS,downstream
3	LOC_Os02g40100	plant protein of unknown function DUF869 domain containing protein, expressed	gene	plant protein of unknown function DUF869 domain containing protein, expressed	chr2	24270439	24275172	+	CDS
3	LOC_Os03g39380	expressed protein	gene	expressed protein	chr3	21880441	21883843	+	three_prime_UTR
3	LOC_Os01g47262	AMSH-like protease, putative, expressed	gene	AMSH-like protease, putative, expressed	chr1	27007759	27011070	+	CDS
3	LOC_Os03g11200	pre-mRNA-processing factor 39, putative, expressed	gene	pre-mRNA-processing factor 39, putative, expressed	chr3	5759804	5766440	-	CDS,three_prime_UTR
3	LOC_Os02g55689	hypothetical protein	gene	hypothetical protein	chr2	34096058	34098749	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os07g02980	hypothetical protein	gene	hypothetical protein	chr7	1109499	1111022	+	CDS,promoter
3	LOC_Os05g11990	TTL1, putative, expressed	gene	TTL1, putative, expressed	chr5	6858598	6862577	+	CDS
3	LOC_Os08g10340	OsFBX278 - F-box domain containing protein, expressed	gene	OsFBX278 - F-box domain containing protein, expressed	chr8	6054592	6058022	+	three_prime_UTR
3	LOC_Os02g37940	CRP12 - Cysteine-rich family protein precursor, expressed	gene	CRP12 - Cysteine-rich family protein precursor, expressed	chr2	22925104	22927676	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g31640	vacuolar protein sorting-associated protein 26, putative, expressed	gene	vacuolar protein sorting-associated protein 26, putative, expressed	chr12	19027158	19032412	+	CDS
3	LOC_Os01g71620	expressed protein	gene	expressed protein	chr1	41485813	41493403	-	three_prime_UTR
3	LOC_Os12g04110	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr12	1718705	1725257	-	CDS,promoter
3	LOC_Os05g45920	S1 RNA binding domain containing protein, expressed	gene	S1 RNA binding domain containing protein, expressed	chr5	26545643	26549792	+	CDS
3	LOC_Os11g47770	selT/selW/selH selenoprotein domain containing protein, expressed	gene	selT/selW/selH selenoprotein domain containing protein, expressed	chr11	28286189	28288329	+	CDS,three_prime_UTR
3	LOC_Os11g16530	mal, putative, expressed	gene	mal, putative, expressed	chr11	9138756	9145977	+	CDS
3	LOC_Os04g42980	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr4	25238809	25244137	-	CDS,five_prime_UTR
3	LOC_Os07g17689	expressed protein	gene	expressed protein	chr7	10439999	10443152	+	three_prime_UTR,downstream
3	LOC_Os10g25680	OsFBL52 - F-box domain and LRR containing protein, expressed	gene	OsFBL52 - F-box domain and LRR containing protein, expressed	chr10	13223142	13232280	-	CDS
3	LOC_Os02g38220	eukaryotic translation initiation factor 4B, putative, expressed	gene	eukaryotic translation initiation factor 4B, putative, expressed	chr2	23110271	23114600	+	CDS,three_prime_UTR,promoter
3	LOC_Os09g01600	expressed protein	gene	expressed protein	chr9	421295	426057	+	CDS,three_prime_UTR
3	LOC_Os01g10900	MRH1, putative, expressed	gene	MRH1, putative, expressed	chr1	5813778	5818207	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g10240	nicotiana lesion-inducing like, putative, expressed	gene	nicotiana lesion-inducing like, putative, expressed	chr4	5522298	5525787	-	CDS,three_prime_UTR
3	LOC_Os02g48100	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr2	29441995	29445577	+	CDS
3	LOC_Os05g41800	ribosomal protein L11 methyltransferase-related, putative, expressed	gene	ribosomal protein L11 methyltransferase-related, putative, expressed	chr5	24418172	24420515	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g52700	expressed protein	gene	expressed protein	chr3	30208453	30216643	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g54380	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr1	31285138	31287050	-	three_prime_UTR,promoter
3	LOC_Os01g63290	transporter, major facilitator family, putative, expressed	gene	transporter, major facilitator family, putative, expressed	chr1	36686502	36694586	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g41530	ubiquitin carboxyl-terminal hydrolase family protein, expressed	gene	ubiquitin carboxyl-terminal hydrolase family protein, expressed	chr8	26230980	26235793	-	CDS
3	LOC_Os08g06360	THO complex subunit 7, putative, expressed	gene	THO complex subunit 7, putative, expressed	chr8	3520465	3523105	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g30430	expressed protein	gene	expressed protein	chr5	17577424	17580961	-	CDS,three_prime_UTR
3	LOC_Os07g47270	protein kinase APK1B, chloroplast precursor, putative, expressed	gene	protein kinase APK1B, chloroplast precursor, putative, expressed	chr7	28249050	28252674	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g35190	OsFBX133 - F-box domain containing protein, expressed	gene	OsFBX133 - F-box domain containing protein, expressed	chr4	21208981	21214250	+	CDS,three_prime_UTR
3	LOC_Os09g27050	HD domain containing protein, putative, expressed	gene	HD domain containing protein, putative, expressed	chr9	16454035	16457598	+	CDS
3	LOC_Os04g01240	serine-type peptidase, putative, expressed	gene	serine-type peptidase, putative, expressed	chr4	181512	185397	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g40010	expressed protein	gene	expressed protein	chr12	24708454	24712998	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g70800	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr1	40977390	40982543	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g31370	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr7	18577846	18581871	-	CDS,three_prime_UTR
3	LOC_Os05g51050	acyl-protein thioesterase, putative, expressed	gene	acyl-protein thioesterase, putative, expressed	chr5	29231180	29234663	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g57230	regulatory protein RecX family protein, putative, expressed	gene	regulatory protein RecX family protein, putative, expressed	chr4	33906501	33910311	+	CDS
3	LOC_Os03g52280	expressed protein	gene	expressed protein	chr3	30015853	30017742	-	three_prime_UTR,promoter
3	LOC_Os01g43250	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr1	24702727	24707867	-	CDS
3	LOC_Os04g34420	serine/threonine-protein kinase receptor precursor, putative	gene	serine/threonine-protein kinase receptor precursor, putative	chr4	20671299	20673725	+	CDS,downstream
3	LOC_Os01g40720	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr1	23004709	23007897	-	CDS,promoter
3	LOC_Os01g05420	IWS1 C-terminus family protein, putative, expressed	gene	IWS1 C-terminus family protein, putative, expressed	chr1	2559858	2564373	+	CDS,three_prime_UTR
3	LOC_Os07g49390	P-protein, putative, expressed	gene	P-protein, putative, expressed	chr7	29578797	29582158	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g73280	conserved hypothetical protein	gene	conserved hypothetical protein	chr1	42471565	42473026	+	CDS,downstream
3	LOC_Os02g52410	expressed protein	gene	expressed protein	chr2	32065339	32074619	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os09g34910	DEAD-box ATP-dependent RNA helicase 7, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase 7, putative, expressed	chr9	20342305	20346746	+	CDS
3	LOC_Os09g07900	ubiquitin-protein ligase 1, putative, expressed	gene	ubiquitin-protein ligase 1, putative, expressed	chr9	4015486	4035019	+	CDS,three_prime_UTR
3	LOC_Os04g33040	alpha-amylase precursor, putative, expressed	gene	alpha-amylase precursor, putative, expressed	chr4	19834164	19837592	+	CDS,downstream
3	LOC_Os05g45760	EMB1796, putative, expressed	gene	EMB1796, putative, expressed	chr5	26441783	26443991	-	three_prime_UTR,promoter
3	LOC_Os01g58890	cysteine proteinase inhibitor precursor protein, putative, expressed	gene	cysteine proteinase inhibitor precursor protein, putative, expressed	chr1	34032112	34033896	+	three_prime_UTR,downstream
3	LOC_Os11g34130	expressed protein	gene	expressed protein	chr11	19519583	19523024	+	CDS,three_prime_UTR
3	LOC_Os06g45360	peptidase, M24 family protein, putative, expressed	gene	peptidase, M24 family protein, putative, expressed	chr6	27418371	27426848	-	five_prime_UTR,CDS,promoter,downstream
3	LOC_Os05g50640	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr5	28966222	28970140	+	five_prime_UTR,CDS
3	LOC_Os03g41080	seed maturation protein PM23, putative, expressed	gene	seed maturation protein PM23, putative, expressed	chr3	22825915	22831506	+	CDS
3	LOC_Os02g27674	expressed protein	gene	expressed protein	chr2	16391822	16393262	-	five_prime_UTR,CDS,downstream
3	LOC_Os11g37610	hypothetical protein	gene	hypothetical protein	chr11	21733281	21736517	-	CDS
3	LOC_Os09g25500	expressed protein	gene	expressed protein	chr9	15285293	15291579	-	CDS,three_prime_UTR
3	LOC_Os10g22430	gibberellin response modulator protein, putative, expressed	gene	gibberellin response modulator protein, putative, expressed	chr10	11533929	11537851	-	three_prime_UTR,CDS
3	LOC_Os09g24910	phosphofructokinase, putative, expressed	gene	phosphofructokinase, putative, expressed	chr9	14869985	14877181	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g40310	dehydrogenase, putative, expressed	gene	dehydrogenase, putative, expressed	chr4	23778853	23782666	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g62900	amino acid kinase, putative, expressed	gene	amino acid kinase, putative, expressed	chr1	36429935	36439800	+	CDS
3	LOC_Os03g55150	eukaryotic translation initiation factor 5A, putative, expressed	gene	eukaryotic translation initiation factor 5A, putative, expressed	chr3	31381268	31383766	+	three_prime_UTR
3	LOC_Os12g43630	lactate/malate dehydrogenase, putative, expressed	gene	lactate/malate dehydrogenase, putative, expressed	chr12	27061046	27065750	-	CDS,three_prime_UTR
3	LOC_Os05g51710	pleckstrin homology domain-containing protein-related taxo, putative, expressed	gene	pleckstrin homology domain-containing protein-related taxo, putative, expressed	chr5	29601385	29604919	-	CDS,three_prime_UTR
3	LOC_Os07g08960	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr7	4657902	4661745	-	three_prime_UTR,promoter,downstream
3	LOC_Os08g33330	protein kinase PKN/PRK1, effector, putative, expressed	gene	protein kinase PKN/PRK1, effector, putative, expressed	chr8	20787714	20792103	+	five_prime_UTR,CDS
3	LOC_Os03g40650	bromodomain associated family protein, expressed	gene	bromodomain associated family protein, expressed	chr3	22594190	22602522	-	three_prime_UTR
3	LOC_Os03g30790	erlin-2 precursor, putative, expressed	gene	erlin-2 precursor, putative, expressed	chr3	17549758	17555090	-	CDS,three_prime_UTR
3	LOC_Os09g33810	ankyrin repeat domain containing protein, putative, expressed	gene	ankyrin repeat domain containing protein, putative, expressed	chr9	19960588	19963923	+	CDS,three_prime_UTR
3	LOC_Os07g07310	polynucleotide phosphorylase, putative, expressed	gene	polynucleotide phosphorylase, putative, expressed	chr7	3644692	3655755	-	CDS,three_prime_UTR
3	LOC_Os10g02490	oxidoreductase, aldo/keto reductase family protein, putative, expressed	gene	oxidoreductase, aldo/keto reductase family protein, putative, expressed	chr10	922686	925881	+	CDS
3	LOC_Os03g60780	armadillo/beta-catenin-like repeat containing protein, expressed	gene	armadillo/beta-catenin-like repeat containing protein, expressed	chr3	34529149	34532205	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g17400	WRKY DNA-binding domain containing protein, expressed	gene	WRKY DNA-binding domain containing protein, expressed	chr8	10632199	10638607	-	CDS,promoter
3	LOC_Os11g38150	expressed protein	gene	expressed protein	chr11	22152690	22158222	-	CDS
3	LOC_Os02g45670	myb-like DNA-binding domain containing protein, expressed	gene	myb-like DNA-binding domain containing protein, expressed	chr2	27770584	27775574	-	CDS,three_prime_UTR
3	LOC_Os12g04160	ribosomal protein L24, putative, expressed	gene	ribosomal protein L24, putative, expressed	chr12	1746182	1749056	-	CDS,three_prime_UTR
3	LOC_Os07g49030	PHD-finger family protein, expressed	gene	PHD-finger family protein, expressed	chr7	29352052	29356323	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g01490	monocopper oxidase, putative, expressed	gene	monocopper oxidase, putative, expressed	chr6	296160	300812	-	CDS,three_prime_UTR
3	LOC_Os03g24060	tetratricopeptide repeat containing protein, putative, expressed	gene	tetratricopeptide repeat containing protein, putative, expressed	chr3	13658102	13661489	-	CDS,three_prime_UTR
3	LOC_Os02g49840	OsMADS57 - MADS-box family gene with MIKCc type-box, expressed	gene	OsMADS57 - MADS-box family gene with MIKCc type-box, expressed	chr2	30450797	30456890	+	CDS,three_prime_UTR
3	LOC_Os01g06470	expressed protein	gene	expressed protein	chr1	3046504	3050989	+	CDS,promoter,downstream
3	LOC_Os12g29340	expressed protein	gene	expressed protein	chr12	17400144	17407833	-	five_prime_UTR,downstream
3	LOC_Os04g52000	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr4	30690096	30694441	-	CDS,three_prime_UTR
3	LOC_Os08g33370	14-3-3 protein, putative, expressed	gene	14-3-3 protein, putative, expressed	chr8	20809790	20812919	-	CDS
3	LOC_Os10g26630	CSLA2 - cellulose synthase-like family A; mannan synthase	gene	CSLA2 - cellulose synthase-like family A; mannan synthase	chr10	13824951	13829650	-	CDS,three_prime_UTR
3	LOC_Os02g50970	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr2	31166067	31174313	+	CDS,three_prime_UTR
3	LOC_Os04g14790	FAD dependent oxidoreductase domain containing protein, expressed	gene	FAD dependent oxidoreductase domain containing protein, expressed	chr4	8302497	8309529	-	CDS
3	LOC_Os02g47120	region found in RelA/SpoT proteins containing protein, expressed	gene	region found in RelA/SpoT proteins containing protein, expressed	chr2	28754031	28761416	+	CDS,promoter
3	LOC_Os06g14470	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr6	8128424	8133492	-	CDS,promoter
3	LOC_Os01g45750	bile acid sodium symporter family protein, putative, expressed	gene	bile acid sodium symporter family protein, putative, expressed	chr1	25972478	25979396	+	CDS,three_prime_UTR
3	LOC_Os07g01870	ribosomal protein L13, putative, expressed	gene	ribosomal protein L13, putative, expressed	chr7	522361	524795	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os08g06420	abhydrolase domain-containing protein FAM108C1, putative, expressed	gene	abhydrolase domain-containing protein FAM108C1, putative, expressed	chr8	3595350	3600701	-	CDS,three_prime_UTR
3	LOC_Os01g65780	glycosyl transferase, putative, expressed	gene	glycosyl transferase, putative, expressed	chr1	38195974	38201574	+	CDS
3	LOC_Os06g04790	HAD superfamily phosphatase, putative, expressed	gene	HAD superfamily phosphatase, putative, expressed	chr6	2087475	2090022	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os12g38870	expressed protein	gene	expressed protein	chr12	23859121	23864757	-	CDS,three_prime_UTR
3	LOC_Os06g03540	oligopeptide transporter, putative, expressed	gene	oligopeptide transporter, putative, expressed	chr6	1363907	1368009	-	CDS
3	LOC_Os06g45900	peptidyl-prolyl cis-trans isomerase-like 4, putative	gene	peptidyl-prolyl cis-trans isomerase-like 4, putative	chr6	27781934	27790012	+	CDS
3	LOC_Os03g57780	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr3	32918554	32923563	+	three_prime_UTR,downstream
3	LOC_Os05g48416	lipase-related, putative, expressed	gene	lipase-related, putative, expressed	chr5	27696888	27701004	-	CDS,three_prime_UTR,downstream
3	LOC_Os04g30760	3-oxoacyl-reductase, chloroplast precursor, putative, expressed	gene	3-oxoacyl-reductase, chloroplast precursor, putative, expressed	chr4	18210713	18215933	-	CDS,three_prime_UTR
3	LOC_Os06g09820	cupin superfamily protein, putative, expressed	gene	cupin superfamily protein, putative, expressed	chr6	5001238	5003825	-	five_prime_UTR,CDS,promoter,downstream
3	LOC_Os07g32590	peptidase, M24 family protein, putative, expressed	gene	peptidase, M24 family protein, putative, expressed	chr7	19426907	19431241	+	CDS
3	LOC_Os07g27140	AT hook motif family protein, expressed	gene	AT hook motif family protein, expressed	chr7	15731608	15745272	-	three_prime_UTR
3	LOC_Os09g25650	GEX2, putative, expressed	gene	GEX2, putative, expressed	chr9	15407311	15414547	-	CDS,promoter
3	LOC_Os01g50160	MDR-like ABC transporter, putative, expressed	gene	MDR-like ABC transporter, putative, expressed	chr1	28824700	28831611	+	CDS
3	LOC_Os12g39180	natural resistance-associated macrophage protein, putative, expressed	gene	natural resistance-associated macrophage protein, putative, expressed	chr12	24086315	24090178	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g51060	CSLA6 - cellulose synthase-like family A; mannan synthase, expressed	gene	CSLA6 - cellulose synthase-like family A; mannan synthase, expressed	chr2	31222515	31226628	-	CDS
3	LOC_Os02g06460	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	3220489	3225189	-	CDS
3	LOC_Os11g47460	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr11	28180678	28182085	-	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g08050	elongation factor Tu, putative, expressed	gene	elongation factor Tu, putative, expressed	chr3	4110405	4112357	+	CDS
3	LOC_Os03g08230	sodium/calcium exchanger protein, putative, expressed	gene	sodium/calcium exchanger protein, putative, expressed	chr3	4193285	4195469	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g31930	shugoshin-1, putative, expressed	gene	shugoshin-1, putative, expressed	chr10	16695616	16698071	+	three_prime_UTR,downstream
3	LOC_Os03g05630	expressed protein	gene	expressed protein	chr3	2810734	2813264	+	CDS
3	LOC_Os05g06260	Spc97 / Spc98 family protein, putative, expressed	gene	Spc97 / Spc98 family protein, putative, expressed	chr5	3181542	3188192	-	CDS,three_prime_UTR,downstream
3	LOC_Os10g34614	csAtPR5, putative, expressed	gene	csAtPR5, putative, expressed	chr10	18379576	18383021	+	CDS
3	LOC_Os03g01200	SNF2 family N-terminal domain containing protein, expressed	gene	SNF2 family N-terminal domain containing protein, expressed	chr3	124320	131789	-	CDS,promoter
3	LOC_Os06g45120	ATP synthase, putative, expressed	gene	ATP synthase, putative, expressed	chr6	27285246	27291855	-	CDS,three_prime_UTR
3	LOC_Os01g26940	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr1	15005986	15012249	-	CDS,three_prime_UTR
3	LOC_Os03g62740	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr3	35495926	35499693	-	three_prime_UTR,promoter
3	LOC_Os02g02940	succinate dehydrogenase subunit 3, putative, expressed	gene	succinate dehydrogenase subunit 3, putative, expressed	chr2	1151805	1154292	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g51670	serine esterase family protein, putative, expressed	gene	serine esterase family protein, putative, expressed	chr3	29578965	29584347	-	CDS
3	LOC_Os01g42620	pentatricopeptide containing protein, putative, expressed	gene	pentatricopeptide containing protein, putative, expressed	chr1	24238886	24244186	-	three_prime_UTR,downstream
3	LOC_Os10g35390	acyltransferase, putative, expressed	gene	acyltransferase, putative, expressed	chr10	18845603	18848911	+	three_prime_UTR
3	LOC_Os05g48410	50S ribosomal protein L21, chloroplast precursor, putative, expressed	gene	50S ribosomal protein L21, chloroplast precursor, putative, expressed	chr5	27693423	27696492	-	three_prime_UTR,downstream
3	LOC_Os10g25110	pumilio-family RNA binding repeat containing protein, expressed	gene	pumilio-family RNA binding repeat containing protein, expressed	chr10	12869442	12875563	-	CDS,three_prime_UTR
3	LOC_Os01g49760	expressed protein	gene	expressed protein	chr1	28577055	28582651	+	three_prime_UTR,CDS,downstream
3	LOC_Os06g45640	core histone H2A/H2B/H3/H4, putative, expressed	gene	core histone H2A/H2B/H3/H4, putative, expressed	chr6	27626769	27632060	+	five_prime_UTR,CDS
3	LOC_Os03g57450	CAMK_CAMK_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr3	32744520	32748541	+	CDS,promoter
3	LOC_Os12g37740	resistance protein LR10, putative, expressed	gene	resistance protein LR10, putative, expressed	chr12	23133534	23138411	-	CDS
3	LOC_Os03g31010	expressed protein	gene	expressed protein	chr3	17668010	17672872	+	CDS
3	LOC_Os02g57330	expressed protein	gene	expressed protein	chr2	35114094	35116876	-	CDS
3	LOC_Os03g32160	calmodulin binding protein, putative, expressed	gene	calmodulin binding protein, putative, expressed	chr3	18395818	18400380	+	CDS,three_prime_UTR
3	LOC_Os04g05030	serine-rich 25 kDa antigen protein, putative, expressed	gene	serine-rich 25 kDa antigen protein, putative, expressed	chr4	2437107	2443384	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g04295	pentatricopeptide repeat domain containing protein, putative, expressed	gene	pentatricopeptide repeat domain containing protein, putative, expressed	chr11	1776856	1780349	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g16650	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr2	9510000	9514046	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g59580	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr1	34457680	34464967	-	CDS
3	LOC_Os01g08310	serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed	gene	serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed	chr1	4067617	4069372	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g29804	expressed protein	gene	expressed protein	chr6	17155037	17159303	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g08860	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr6	4442022	4445511	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g48930	expressed protein	gene	expressed protein	chr6	29619478	29621475	-	CDS,three_prime_UTR
3	LOC_Os01g16080	expressed protein	gene	expressed protein	chr1	9056835	9060059	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g31150	expressed protein	gene	expressed protein	chr3	17736848	17740374	+	CDS,three_prime_UTR
3	LOC_Os08g35960	OsFBD14 - F-box and FBD domain containing protein, expressed	gene	OsFBD14 - F-box and FBD domain containing protein, expressed	chr8	22673057	22676599	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g57720	expressed protein	gene	expressed protein	chr1	33367646	33373853	-	CDS,three_prime_UTR
3	LOC_Os05g10770	transcription factor jumonji, putative, expressed	gene	transcription factor jumonji, putative, expressed	chr5	5940076	5946805	+	CDS
3	LOC_Os04g36890	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	chr4	22073176	22077461	+	CDS,three_prime_UTR
3	LOC_Os09g23280	pyrrolidone-carboxylate peptidase, putative, expressed	gene	pyrrolidone-carboxylate peptidase, putative, expressed	chr9	13812670	13815758	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g52970	deoxyhypusine synthase, putative, expressed	gene	deoxyhypusine synthase, putative, expressed	chr3	30374568	30378986	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g23700	lectin protein kinase family protein, putative, expressed	gene	lectin protein kinase family protein, putative, expressed	chr4	13543389	13546047	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g54930	hypothetical protein	gene	hypothetical protein	chr2	33635603	33638439	+	CDS,downstream
3	LOC_Os01g70840	esterase, putative, expressed	gene	esterase, putative, expressed	chr1	41001391	41003020	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os11g04720	OsRR10  type-A response regulator, expressed	gene	OsRR10  type-A response regulator, expressed	chr11	2009229	2011263	+	three_prime_UTR,downstream
3	LOC_Os02g22480	glycosyltransferase, putative, expressed	gene	glycosyltransferase, putative, expressed	chr2	13417115	13420211	+	CDS
3	LOC_Os11g15000	expressed protein	gene	expressed protein	chr11	8441034	8442020	+	three_prime_UTR,downstream
3	LOC_Os02g55790	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	34152482	34155627	+	CDS,promoter
3	LOC_Os01g20110	expressed protein	gene	expressed protein	chr1	11411107	11420023	+	CDS
3	LOC_Os01g55410	expressed protein	gene	expressed protein	chr1	31918450	31921362	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g01350	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr5	213567	217690	+	CDS,three_prime_UTR
3	LOC_Os09g31502	dehydrogenase, putative, expressed	gene	dehydrogenase, putative, expressed	chr9	19010574	19013398	-	CDS
3	LOC_Os08g44640	OsSCP41 - Putative Serine Carboxypeptidase homologue, expressed	gene	OsSCP41 - Putative Serine Carboxypeptidase homologue, expressed	chr8	28066586	28071924	+	CDS,downstream
3	LOC_Os11g39160	NBS-LRR disease resistance protein, putative	gene	NBS-LRR disease resistance protein, putative	chr11	22839736	22847294	-	CDS
3	LOC_Os11g09970	OsFBX411 - F-box domain containing protein, expressed	gene	OsFBX411 - F-box domain containing protein, expressed	chr11	5338212	5341365	-	CDS
3	LOC_Os03g29760	nuclear transcription factor Y subunit, putative, expressed	gene	nuclear transcription factor Y subunit, putative, expressed	chr3	16964060	16969646	+	CDS,three_prime_UTR
3	LOC_Os11g02150	saposin-like type B, region 1 family protein, putative, expressed	gene	saposin-like type B, region 1 family protein, putative, expressed	chr11	590875	593853	+	CDS,three_prime_UTR
3	LOC_Os02g39030	transmembrane protein 17, putative, expressed	gene	transmembrane protein 17, putative, expressed	chr2	23567092	23569702	+	CDS,three_prime_UTR
3	LOC_Os03g04250	glutathione S-transferase, putative, expressed	gene	glutathione S-transferase, putative, expressed	chr3	1951268	1952448	-	five_prime_UTR,CDS,downstream
3	LOC_Os01g54080	kinesin motor protein-related, putative, expressed	gene	kinesin motor protein-related, putative, expressed	chr1	31098349	31105782	+	CDS,downstream
3	LOC_Os07g48570	expressed protein	gene	expressed protein	chr7	29076204	29080187	-	CDS,three_prime_UTR
3	LOC_Os02g34730	transposon protein, putative, Mariner sub-class, expressed	gene	transposon protein, putative, Mariner sub-class, expressed	chr2	20826945	20829552	-	CDS,three_prime_UTR
3	LOC_Os07g13534	expressed protein	gene	expressed protein	chr7	7748271	7750787	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os03g53720	SRPK4, putative, expressed	gene	SRPK4, putative, expressed	chr3	30796201	30800304	+	three_prime_UTR,CDS
3	LOC_Os02g27620	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	gene	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	chr2	16354213	16358559	-	five_prime_UTR,CDS
3	LOC_Os02g47220	CPuORF20 - conserved peptide uORF-containing transcript, expressed	gene	CPuORF20 - conserved peptide uORF-containing transcript, expressed	chr2	28814926	28820789	+	CDS,three_prime_UTR
3	LOC_Os05g18274	expressed protein	gene	expressed protein	chr5	10524993	10527362	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os03g56260	kinesin motor domain containing protein, putative, expressed	gene	kinesin motor domain containing protein, putative, expressed	chr3	32057128	32063985	+	CDS,three_prime_UTR
3	LOC_Os06g29790	phosphate transporter 1, putative, expressed	gene	phosphate transporter 1, putative, expressed	chr6	17129056	17133976	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g08460	TMS membrane protein/tumour differentially expressed protein, putative, expressed	gene	TMS membrane protein/tumour differentially expressed protein, putative, expressed	chr1	4166511	4170559	-	CDS
3	LOC_Os01g53000	trehalose synthase, putative, expressed	gene	trehalose synthase, putative, expressed	chr1	30458963	30463488	+	CDS,three_prime_UTR
3	LOC_Os06g40720	EF hand family protein, putative, expressed	gene	EF hand family protein, putative, expressed	chr6	24272305	24274959	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g14929	T-complex protein, putative, expressed	gene	T-complex protein, putative, expressed	chr2	8326082	8343177	-	CDS
3	LOC_Os07g38730	tubulin/FtsZ domain containing protein, putative, expressed	gene	tubulin/FtsZ domain containing protein, putative, expressed	chr7	23242800	23246249	+	CDS,three_prime_UTR
3	LOC_Os12g24040	glycosyl hydrolase family 9 protein, expressed	gene	glycosyl hydrolase family 9 protein, expressed	chr12	13658966	13663130	+	CDS,downstream
3	LOC_Os05g03060	expressed protein	gene	expressed protein	chr5	1195062	1199225	+	three_prime_UTR,downstream
3	LOC_Os02g55410	MCM5 - Putative minichromosome maintenance MCM complex subunit 5, expressed	gene	MCM5 - Putative minichromosome maintenance MCM complex subunit 5, expressed	chr2	33930319	33934669	-	CDS,three_prime_UTR
3	LOC_Os11g10990	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr11	6060748	6062549	-	three_prime_UTR,promoter
3	LOC_Os06g46890	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	gene	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	chr6	28456950	28462497	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g72790	cyclin-dependent kinase, putative, expressed	gene	cyclin-dependent kinase, putative, expressed	chr1	42228462	42231597	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g14740	NAD binding domain of 6-phosphogluconate dehydrogenase containing protein, expressed	gene	NAD binding domain of 6-phosphogluconate dehydrogenase containing protein, expressed	chr6	8300781	8315933	+	CDS,downstream
3	LOC_Os02g57080	serine/threonine-protein kinase, putative, expressed	gene	serine/threonine-protein kinase, putative, expressed	chr2	34939104	34946140	-	CDS,three_prime_UTR
3	LOC_Os12g43850	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr12	27186781	27191737	+	CDS
3	LOC_Os08g39140	heat shock protein, putative, expressed	gene	heat shock protein, putative, expressed	chr8	24716372	24720839	-	CDS,promoter
3	LOC_Os07g08140	heat stress transcription factor, putative, expressed	gene	heat stress transcription factor, putative, expressed	chr7	4138161	4141450	+	CDS,three_prime_UTR
3	LOC_Os08g03682	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr8	1751710	1754656	+	five_prime_UTR,CDS,promoter
3	LOC_Os05g43280	MATH domain containing protein, expressed	gene	MATH domain containing protein, expressed	chr5	25114072	25124166	+	CDS
3	LOC_Os06g41780	guanine nucleotide exchange family protein, putative, expressed	gene	guanine nucleotide exchange family protein, putative, expressed	chr6	25049896	25054632	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g03620	expressed protein	gene	expressed protein	chr11	1404321	1406202	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g51440	LRR receptor-like protein kinase, putative, expressed	gene	LRR receptor-like protein kinase, putative, expressed	chr3	29419386	29423955	-	CDS,promoter
3	LOC_Os11g02200	expressed protein	gene	expressed protein	chr11	617440	619126	+	CDS,downstream
3	LOC_Os08g37610	expressed protein	gene	expressed protein	chr8	23831442	23841777	+	CDS,three_prime_UTR,promoter
3	LOC_Os02g26349	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr2	15462135	15471529	-	three_prime_UTR
3	LOC_Os05g51850	AT hook-containing DNA-binding protein, putative, expressed	gene	AT hook-containing DNA-binding protein, putative, expressed	chr5	29696455	29698793	-	three_prime_UTR,promoter
3	LOC_Os05g08800	DUF581 domain containing protein, expressed	gene	DUF581 domain containing protein, expressed	chr5	4837533	4839838	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g09670	MYB protein, putative, expressed	gene	MYB protein, putative, expressed	chr2	4966917	4973683	+	three_prime_UTR
3	LOC_Os01g42800	MEE18, putative, expressed	gene	MEE18, putative, expressed	chr1	24353107	24359440	-	CDS,three_prime_UTR
3	LOC_Os10g05210	OsFBX368 - F-box domain containing protein, expressed	gene	OsFBX368 - F-box domain containing protein, expressed	chr10	2552956	2556396	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g59225	expressed protein	gene	expressed protein	chr3	33714877	33717720	+	three_prime_UTR,promoter,downstream
3	LOC_Os03g07420	3-dehydroquinate synthase, putative, expressed	gene	3-dehydroquinate synthase, putative, expressed	chr3	3762794	3766228	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g22440	expressed protein	gene	expressed protein	chr9	13552667	13557093	+	CDS,three_prime_UTR
3	LOC_Os06g12780	OsDegp10 - Putative Deg protease homologue, expressed	gene	OsDegp10 - Putative Deg protease homologue, expressed	chr6	6979032	6985314	+	CDS,three_prime_UTR
3	LOC_Os10g27220	phospholipid-transporting ATPase 3, putative, expressed	gene	phospholipid-transporting ATPase 3, putative, expressed	chr10	14270542	14274951	-	CDS,three_prime_UTR
3	LOC_Os06g29460	expressed protein	gene	expressed protein	chr6	16878350	16880671	-	three_prime_UTR,promoter
3	LOC_Os01g69910	calmodulin-binding transcription activator, putative, expressed	gene	calmodulin-binding transcription activator, putative, expressed	chr1	40396260	40402206	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g02904	expressed protein	gene	expressed protein	chr8	1239965	1249360	+	three_prime_UTR
3	LOC_Os11g34364	armadillo/beta-catenin-like repeat containing protein, expressed	gene	armadillo/beta-catenin-like repeat containing protein, expressed	chr11	19675119	19677448	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g43906	ceramide kinase-related, putative, expressed	gene	ceramide kinase-related, putative, expressed	chr2	26498487	26501649	-	CDS
3	LOC_Os05g25400	RNA binding protein, putative, expressed	gene	RNA binding protein, putative, expressed	chr5	14713046	14715660	+	CDS,three_prime_UTR
3	LOC_Os12g06330	CPuORF6 - conserved peptide uORF-containing transcript, expressed	gene	CPuORF6 - conserved peptide uORF-containing transcript, expressed	chr12	3023062	3028415	+	CDS,three_prime_UTR
3	LOC_Os12g41700	LSD1 zinc finger domain containing protein, expressed	gene	LSD1 zinc finger domain containing protein, expressed	chr12	25781671	25785268	-	CDS,promoter,downstream
3	LOC_Os12g10830	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr12	5828930	5842420	+	CDS
3	LOC_Os09g39550	expressed protein	gene	expressed protein	chr9	22702881	22705232	+	three_prime_UTR,CDS,promoter
3	LOC_Os05g07670	solute carrier family 35 member E3, putative, expressed	gene	solute carrier family 35 member E3, putative, expressed	chr5	4117705	4121336	-	CDS,three_prime_UTR
3	LOC_Os01g55094	expressed protein	gene	expressed protein	chr1	31677267	31688883	-	three_prime_UTR,CDS
3	LOC_Os07g31400	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr7	18596889	18602413	-	three_prime_UTR,promoter
3	LOC_Os07g41140	receptor-like protein kinase precursor, putative, expressed	gene	receptor-like protein kinase precursor, putative, expressed	chr7	24620070	24623916	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g12910	PHD finger protein, putative, expressed	gene	PHD finger protein, putative, expressed	chr7	7413573	7417064	-	CDS,three_prime_UTR
3	LOC_Os11g37040	expressed protein	gene	expressed protein	chr11	21394147	21397904	-	CDS,three_prime_UTR
3	LOC_Os02g52260	expressed protein	gene	expressed protein	chr2	31993336	31995386	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g09584	expressed protein	gene	expressed protein	chr12	5041572	5043619	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os09g04300	expressed protein	gene	expressed protein	chr9	2287101	2289986	+	three_prime_UTR
3	LOC_Os03g26220	expressed protein	gene	expressed protein	chr3	15001165	15003210	-	CDS,promoter
3	LOC_Os05g43800	expressed protein	gene	expressed protein	chr5	25401600	25403854	-	three_prime_UTR,promoter
3	LOC_Os08g16130	fiber protein Fb34, putative, expressed	gene	fiber protein Fb34, putative, expressed	chr8	9829990	9833055	-	CDS,three_prime_UTR
3	LOC_Os12g16690	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr12	9563173	9568395	+	three_prime_UTR,downstream
3	LOC_Os04g49440	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr4	29314234	29316657	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g63400	transcription factor BTF3, putative, expressed	gene	transcription factor BTF3, putative, expressed	chr3	35814981	35817227	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g49660	reticulon domain containing protein, putative	gene	reticulon domain containing protein, putative	chr1	28538949	28540209	+	CDS,downstream
3	LOC_Os02g46480	expressed protein	gene	expressed protein	chr2	28327062	28329535	+	five_prime_UTR,CDS
3	LOC_Os02g31220	expressed protein	gene	expressed protein	chr2	18699517	18706535	+	CDS,three_prime_UTR
3	LOC_Os02g41520	glycosyl transferase 8 domain containing protein, putative, expressed	gene	glycosyl transferase 8 domain containing protein, putative, expressed	chr2	24893654	24899193	+	CDS
3	LOC_Os07g27770	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr7	16206181	16208207	+	CDS
3	LOC_Os07g08340	pyruvate kinase, putative, expressed	gene	pyruvate kinase, putative, expressed	chr7	4265881	4270519	+	CDS,three_prime_UTR,promoter
3	LOC_Os02g17640	isochorismatase family protein, putative, expressed	gene	isochorismatase family protein, putative, expressed	chr2	10152154	10155561	-	CDS,downstream
3	LOC_Os04g57320	immutans protein, putative, expressed	gene	immutans protein, putative, expressed	chr4	33937718	33940830	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g61814	40S ribosomal protein S23, putative, expressed	gene	40S ribosomal protein S23, putative, expressed	chr1	35758895	35764124	-	three_prime_UTR,promoter
3	LOC_Os02g49820	RNA recognition motif family protein, expressed	gene	RNA recognition motif family protein, expressed	chr2	30439027	30442556	+	CDS,three_prime_UTR
3	LOC_Os01g64560	helix-loop-helix DNA-binding protein, putative, expressed	gene	helix-loop-helix DNA-binding protein, putative, expressed	chr1	37456410	37462708	+	CDS
3	LOC_Os05g01910	pumilio-family RNA binding protein, putative, expressed	gene	pumilio-family RNA binding protein, putative, expressed	chr5	516916	522945	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g45320	COX VIIa, putative, expressed	gene	COX VIIa, putative, expressed	chr7	27039002	27040977	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os08g41710	FHA domain containing protein, putative, expressed	gene	FHA domain containing protein, putative, expressed	chr8	26322282	26325910	+	CDS,three_prime_UTR
3	LOC_Os05g06450	tubulin/FtsZ domain containing protein, putative, expressed	gene	tubulin/FtsZ domain containing protein, putative, expressed	chr5	3307904	3312592	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g45540	synthase, putative, expressed	gene	synthase, putative, expressed	chr2	27703196	27707290	+	CDS,three_prime_UTR
3	LOC_Os02g52910	zinc finger protein, putative, expressed	gene	zinc finger protein, putative, expressed	chr2	32344045	32346794	-	CDS,downstream
3	LOC_Os05g35274	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr5	20885609	20888818	-	three_prime_UTR,promoter
3	LOC_Os01g14030	DUF260 domain containing protein, putative, expressed	gene	DUF260 domain containing protein, putative, expressed	chr1	7855373	7856612	+	three_prime_UTR,promoter,downstream
3	LOC_Os12g38880	tetratricopeptide-like helical, putative, expressed	gene	tetratricopeptide-like helical, putative, expressed	chr12	23878558	23881227	-	three_prime_UTR,promoter
3	LOC_Os06g30830	OsMADS76 - MADS-box family gene with M-alpha type-box, expressed	gene	OsMADS76 - MADS-box family gene with M-alpha type-box, expressed	chr6	17886765	17890220	-	CDS,promoter
3	LOC_Os10g27450	tetrapyrrole methylase family protein, putative, expressed	gene	tetrapyrrole methylase family protein, putative, expressed	chr10	14403547	14407576	-	CDS,three_prime_UTR
3	LOC_Os01g70950	spermatogenesis-associated protein 20 precursor, putative, expressed	gene	spermatogenesis-associated protein 20 precursor, putative, expressed	chr1	41065540	41069721	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g10300	expressed protein	gene	expressed protein	chr7	5520610	5525699	+	CDS
3	LOC_Os08g39870	Os8bglu28 - beta-glucosidase homologue, similar to Os4bglu12 exoglucanase, expressed	gene	Os8bglu28 - beta-glucosidase homologue, similar to Os4bglu12 exoglucanase, expressed	chr8	25257410	25264221	-	CDS
3	LOC_Os02g20280	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	11948147	11949716	+	CDS,downstream
3	LOC_Os12g19090	metalloprotease ATP23, putative, expressed	gene	metalloprotease ATP23, putative, expressed	chr12	11078490	11081000	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g40750	expressed protein	gene	expressed protein	chr1	23021998	23025072	-	CDS,three_prime_UTR
3	LOC_Os04g40910	OsFBX146 - F-box domain containing protein, expressed	gene	OsFBX146 - F-box domain containing protein, expressed	chr4	24094446	24098138	-	three_prime_UTR,promoter
3	LOC_Os10g27340	oxidoreductase, putative, expressed	gene	oxidoreductase, putative, expressed	chr10	14356994	14361147	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g40780	transport protein-related, putative, expressed	gene	transport protein-related, putative, expressed	chr3	22668949	22674280	-	CDS,three_prime_UTR
3	LOC_Os08g28240	carotenoid cleavage dioxygenase, putative	gene	carotenoid cleavage dioxygenase, putative	chr8	17226453	17232774	-	CDS,promoter
3	LOC_Os12g05090	peptidyl-prolyl isomerase, putative, expressed	gene	peptidyl-prolyl isomerase, putative, expressed	chr12	2235009	2238463	+	CDS,three_prime_UTR
3	LOC_Os03g09210	NADH dehydrogenase 1 alpha subcomplex subunit 13, putative, expressed	gene	NADH dehydrogenase 1 alpha subcomplex subunit 13, putative, expressed	chr3	4806925	4809878	-	CDS,three_prime_UTR
3	LOC_Os09g30474	BPI/LBP family protein At3g20270 precursor, putative, expressed	gene	BPI/LBP family protein At3g20270 precursor, putative, expressed	chr9	18568418	18573040	-	CDS,three_prime_UTR
3	LOC_Os08g40160	thylakoid lumen protein, chloroplast precursor, putative, expressed	gene	thylakoid lumen protein, chloroplast precursor, putative, expressed	chr8	25413392	25416079	+	CDS,three_prime_UTR
3	LOC_Os07g32380	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr7	19242272	19246827	-	CDS
3	LOC_Os02g10650	CRAL/TRIO domain containing protein, expressed	gene	CRAL/TRIO domain containing protein, expressed	chr2	5604236	5609533	+	CDS,three_prime_UTR
3	LOC_Os04g02000	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr4	616482	621877	-	CDS
3	LOC_Os11g27450	Leucine Rich Repeat family protein	gene	Leucine Rich Repeat family protein	chr11	15336244	15340245	+	CDS,promoter
3	LOC_Os05g41510	SH2 motif, putative, expressed	gene	SH2 motif, putative, expressed	chr5	24238766	24248545	+	CDS
3	LOC_Os01g13530	ABIL2, putative, expressed	gene	ABIL2, putative, expressed	chr1	7556172	7559626	+	CDS
3	LOC_Os04g48260	zinc RING finger protein, putative, expressed	gene	zinc RING finger protein, putative, expressed	chr4	28559249	28562735	+	CDS,three_prime_UTR
3	LOC_Os03g08580	expressed protein	gene	expressed protein	chr3	4415606	4418119	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g21180	phosphatidic acid phosphatase-related, putative, expressed	gene	phosphatidic acid phosphatase-related, putative, expressed	chr5	12453173	12457726	+	CDS,three_prime_UTR
3	LOC_Os05g05490	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr5	2734235	2736978	+	three_prime_UTR,promoter,downstream
3	LOC_Os03g53890	N2, N2-dimethylguanosine tRNA methyltransferase, putative, expressed	gene	N2, N2-dimethylguanosine tRNA methyltransferase, putative, expressed	chr3	30892956	30895096	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g10920	expressed protein	gene	expressed protein	chr7	5972601	5978140	-	three_prime_UTR
3	LOC_Os12g32992	expressed protein	gene	expressed protein	chr12	19899831	19904318	-	CDS,three_prime_UTR
3	LOC_Os11g02550	expressed protein	gene	expressed protein	chr11	800633	804623	-	CDS
3	LOC_Os01g16660	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr1	9446764	9449763	-	CDS,downstream
3	LOC_Os01g16414	actin, putative, expressed	gene	actin, putative, expressed	chr1	9317824	9322315	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g10550	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr11	5772767	5783591	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g12740	leucine-rich repeat family protein, putative, expressed	gene	leucine-rich repeat family protein, putative, expressed	chr12	7016211	7021556	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g38330	NDP1, putative, expressed	gene	NDP1, putative, expressed	chr5	22405369	22409514	-	CDS,three_prime_UTR
3	LOC_Os11g37130	mttA/Hcf106 family protein, putative, expressed	gene	mttA/Hcf106 family protein, putative, expressed	chr11	21454030	21457216	-	CDS,three_prime_UTR
3	LOC_Os08g01430	OsFBX260 - F-box domain containing protein, expressed	gene	OsFBX260 - F-box domain containing protein, expressed	chr8	277006	280347	-	three_prime_UTR
3	LOC_Os05g16824	SHR5-receptor-like kinase, putative, expressed	gene	SHR5-receptor-like kinase, putative, expressed	chr5	9585909	9595399	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os05g32180	acetyltransferase, GNAT family, putative, expressed	gene	acetyltransferase, GNAT family, putative, expressed	chr5	18701136	18704667	-	CDS
3	LOC_Os03g19560	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr3	10991547	10996272	-	CDS,three_prime_UTR,downstream
3	LOC_Os07g38160	expressed protein	gene	expressed protein	chr7	22881239	22886152	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g23440	solute carrier family 35 member F1, putative, expressed	gene	solute carrier family 35 member F1, putative, expressed	chr5	13347871	13353374	+	CDS
3	LOC_Os05g49260	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr5	28195790	28199526	+	CDS
3	LOC_Os08g05620	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr8	3006244	3008198	+	three_prime_UTR,downstream
3	LOC_Os02g02600	serine/threonine-protein kinase Cx32, chloroplast precursor, putative, expressed	gene	serine/threonine-protein kinase Cx32, chloroplast precursor, putative, expressed	chr2	950728	954728	+	CDS
3	LOC_Os11g42070	Leucine Rich Repeat family protein, expressed	gene	Leucine Rich Repeat family protein, expressed	chr11	24855150	24859319	+	CDS
3	LOC_Os08g35900	OsFBL49 - F-box domain and LRR containing protein, expressed	gene	OsFBL49 - F-box domain and LRR containing protein, expressed	chr8	22637967	22643406	-	three_prime_UTR
3	LOC_Os08g40090	leucine rich repeat containing protein, expressed	gene	leucine rich repeat containing protein, expressed	chr8	25374973	25378567	-	CDS,three_prime_UTR
3	LOC_Os02g18870	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr2	11009375	11014978	+	CDS,downstream
3	LOC_Os12g07020	5-formyltetrahydrofolate cyclo-ligase, putative, expressed	gene	5-formyltetrahydrofolate cyclo-ligase, putative, expressed	chr12	3430911	3436223	+	CDS,three_prime_UTR,promoter
3	LOC_Os05g22670	transcription factor IIA large subunit, putative, expressed	gene	transcription factor IIA large subunit, putative, expressed	chr5	12808826	12815325	+	CDS
3	LOC_Os05g03840	endoglucanase, putative	gene	endoglucanase, putative	chr5	1707157	1709058	-	CDS,promoter
3	LOC_Os01g56930	eukaryotic aspartyl protease domain containing protein, expressed	gene	eukaryotic aspartyl protease domain containing protein, expressed	chr1	32885806	32891600	+	CDS
3	LOC_Os03g42480	expressed protein	gene	expressed protein	chr3	23631442	23638256	-	CDS,three_prime_UTR
3	LOC_Os12g10784	2-dehydro-3-deoxyphosphooctonate aldolase, putative, expressed	gene	2-dehydro-3-deoxyphosphooctonate aldolase, putative, expressed	chr12	5800404	5806220	+	CDS,three_prime_UTR
3	LOC_Os08g44560	expressed protein	gene	expressed protein	chr8	28011344	28017541	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g57082	insulin-degrading enzyme, putative	gene	insulin-degrading enzyme, putative	chr1	32983938	32993475	+	CDS
3	LOC_Os02g16680	bZIP transcription factor domain containing protein, expressed	gene	bZIP transcription factor domain containing protein, expressed	chr2	9535408	9538488	-	CDS
3	LOC_Os08g08210	SET domain containing protein, expressed	gene	SET domain containing protein, expressed	chr8	4690119	4695733	+	CDS,three_prime_UTR
3	LOC_Os12g35030	plus-3 domain containing protein, expressed	gene	plus-3 domain containing protein, expressed	chr12	21288793	21290987	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g62410	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr1	36121735	36127444	+	CDS,three_prime_UTR
3	LOC_Os02g43010	vacuolar-processing enzyme precursor, putative, expressed	gene	vacuolar-processing enzyme precursor, putative, expressed	chr2	25884572	25889375	-	CDS,three_prime_UTR
3	LOC_Os04g46180	AGC_PVPK_like_kin82y.11 - ACG kinases include homologs to PKA, PKG and PKC, expressed	gene	AGC_PVPK_like_kin82y.11 - ACG kinases include homologs to PKA, PKG and PKC, expressed	chr4	27168679	27172665	+	CDS,three_prime_UTR
3	LOC_Os01g09200	AGC_AGC_other_NDRh_TRCd.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed	gene	AGC_AGC_other_NDRh_TRCd.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed	chr1	4620677	4630365	-	CDS,three_prime_UTR
3	LOC_Os11g26900	expressed protein	gene	expressed protein	chr11	14989256	14991411	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g16709	peptidase, putative, expressed	gene	peptidase, putative, expressed	chr2	9544159	9550625	+	CDS,three_prime_UTR
3	LOC_Os02g54010	lipase class 3 family protein, putative, expressed	gene	lipase class 3 family protein, putative, expressed	chr2	33072355	33077687	+	CDS,promoter,downstream
3	LOC_Os02g36400	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	gene	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	chr2	21980838	21985550	-	CDS
3	LOC_Os02g33450	peroxiredoxin, putative, expressed	gene	peroxiredoxin, putative, expressed	chr2	19876184	19880477	+	CDS
3	LOC_Os03g44484	DNA-directed RNA polymerase II subunit RPB2, putative, expressed	gene	DNA-directed RNA polymerase II subunit RPB2, putative, expressed	chr3	25031603	25040189	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g05440	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr7	2501664	2506765	+	five_prime_UTR,CDS
3	LOC_Os03g59340	CESA2 - cellulose synthase, expressed	gene	CESA2 - cellulose synthase, expressed	chr3	33772883	33779337	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g43870	inactive receptor kinase At2g26730 precursor, putative, expressed	gene	inactive receptor kinase At2g26730 precursor, putative, expressed	chr2	26488630	26491841	-	CDS
3	LOC_Os09g03090	expressed protein	gene	expressed protein	chr9	1463327	1469443	-	CDS,three_prime_UTR
3	LOC_Os08g32100	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr8	19910330	19916063	-	CDS,three_prime_UTR
3	LOC_Os08g03370	Divergent PAP2 family domain containing protein, expressed	gene	Divergent PAP2 family domain containing protein, expressed	chr8	1577149	1579301	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g35550	pre-mRNA-processing factor 6, putative, expressed	gene	pre-mRNA-processing factor 6, putative, expressed	chr10	18938237	18942831	-	three_prime_UTR,promoter
3	LOC_Os06g43280	paxneb-related protein, putative, expressed	gene	paxneb-related protein, putative, expressed	chr6	26005185	26009416	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g43950	homeobox domain containing protein, expressed	gene	homeobox domain containing protein, expressed	chr12	27237929	27243182	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g11550	protein of unknown function DUF1675 domain containing protein, expressed	gene	protein of unknown function DUF1675 domain containing protein, expressed	chr3	5982457	5987828	-	CDS,promoter
3	LOC_Os06g43180	cyclase family protein, putative, expressed	gene	cyclase family protein, putative, expressed	chr6	25958367	25962507	-	three_prime_UTR,promoter,downstream
3	LOC_Os03g36419	expressed protein	gene	expressed protein	chr3	20181825	20186439	-	three_prime_UTR,promoter,downstream
3	LOC_Os10g05000	OsFBX366 - F-box domain containing protein	gene	OsFBX366 - F-box domain containing protein	chr10	2437806	2439235	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g35110	alpha-galactosidase precursor, putative, expressed	gene	alpha-galactosidase precursor, putative, expressed	chr10	18661847	18669940	+	CDS,five_prime_UTR
3	LOC_Os03g26960	intron-binding protein aquarius, putative, expressed	gene	intron-binding protein aquarius, putative, expressed	chr3	15409079	15418249	+	CDS,three_prime_UTR
3	LOC_Os02g55120	translation initiation factor IF-3, putative, expressed	gene	translation initiation factor IF-3, putative, expressed	chr2	33753097	33756764	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g10100	STE_MEKK_ste11_MAP3K.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	gene	STE_MEKK_ste11_MAP3K.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	chr11	5455952	5460406	+	CDS,three_prime_UTR
3	LOC_Os11g06410	homeodomain, putative, expressed	gene	homeodomain, putative, expressed	chr11	3087416	3092226	+	CDS,three_prime_UTR
3	LOC_Os03g49510	phosphatidylinositol-4-phosphate 5-kinase, putative, expressed	gene	phosphatidylinositol-4-phosphate 5-kinase, putative, expressed	chr3	28173281	28179197	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g64010	dual specificity protein phosphatase, putative, expressed	gene	dual specificity protein phosphatase, putative, expressed	chr1	37176391	37183889	+	CDS,three_prime_UTR
3	LOC_Os02g03540	phosphoribosyl transferase, putative, expressed	gene	phosphoribosyl transferase, putative, expressed	chr2	1437433	1441125	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g47180	receptor-like protein kinase 2 precursor, putative, expressed	gene	receptor-like protein kinase 2 precursor, putative, expressed	chr11	27853106	27856510	+	CDS,promoter
3	LOC_Os12g28260	cyclic nucleotide-gated ion channel, putative, expressed	gene	cyclic nucleotide-gated ion channel, putative, expressed	chr12	16696467	16701163	+	three_prime_UTR,downstream
3	LOC_Os02g09340	expressed protein	gene	expressed protein	chr2	4802877	4806456	-	CDS,three_prime_UTR
3	LOC_Os09g19880	conserved hypothetical protein	gene	conserved hypothetical protein	chr9	11895013	11901545	+	CDS
3	LOC_Os08g34300	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr8	21524168	21529069	+	CDS,downstream
3	LOC_Os12g10550	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr12	5595768	5597891	+	CDS,three_prime_UTR
3	LOC_Os11g10680	WD domain, G-beta repeat domain containing protein	gene	WD domain, G-beta repeat domain containing protein	chr11	5855773	5857743	-	CDS
3	LOC_Os03g50980	ATSIZ1/SIZ1, putative, expressed	gene	ATSIZ1/SIZ1, putative, expressed	chr3	29119839	29128018	+	CDS,three_prime_UTR
3	LOC_Os03g02260	DnaK family protein, putative, expressed	gene	DnaK family protein, putative, expressed	chr3	765646	770262	-	CDS
3	LOC_Os04g03796	OsSub37 - Putative Subtilisin homologue, expressed	gene	OsSub37 - Putative Subtilisin homologue, expressed	chr4	1697552	1706068	+	CDS
3	LOC_Os03g04000	AMP-binding domain containing protein, expressed	gene	AMP-binding domain containing protein, expressed	chr3	1821235	1825136	+	CDS
3	LOC_Os10g39420	CAMK_CAMK_like.8 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.8 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr10	20955933	20960704	+	CDS
3	LOC_Os10g41490	CAMK_CAMK_like.41 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.41 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr10	22223207	22226174	-	CDS,three_prime_UTR
3	LOC_Os01g02320	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr1	730149	737020	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g55700	exonuclease, putative, expressed	gene	exonuclease, putative, expressed	chr4	32964319	32968180	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g43450	transcription initiation factor IIF beta subunit, putative, expressed	gene	transcription initiation factor IIF beta subunit, putative, expressed	chr5	25198086	25201147	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g58630	thioredoxin, putative, expressed	gene	thioredoxin, putative, expressed	chr3	33384223	33386485	-	CDS,downstream
3	LOC_Os03g15740	uncharacterized TPR repeat-containing protein, putative, expressed	gene	uncharacterized TPR repeat-containing protein, putative, expressed	chr3	8678048	8681274	+	three_prime_UTR,downstream
3	LOC_Os07g42280	von Willebrand factor type A domain containing protein, expressed	gene	von Willebrand factor type A domain containing protein, expressed	chr7	25297449	25304752	+	CDS
3	LOC_Os03g52160	regulatory protein, putative, expressed	gene	regulatory protein, putative, expressed	chr3	29941971	29944149	+	three_prime_UTR,downstream
3	LOC_Os03g07750	expressed protein	gene	expressed protein	chr3	3935676	3939814	-	CDS,three_prime_UTR
3	LOC_Os07g03260	CSLC10 - cellulose synthase-like family C	gene	CSLC10 - cellulose synthase-like family C	chr7	1304328	1307048	-	CDS,promoter
3	LOC_Os05g22870	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr5	12932602	12935401	-	CDS
3	LOC_Os03g32636	hypothetical protein	gene	hypothetical protein	chr3	18689815	18690906	+	CDS,downstream
3	LOC_Os05g06980	expressed protein	gene	expressed protein	chr5	3652639	3663523	-	CDS,three_prime_UTR
3	LOC_Os12g18140	superkiller viralicidic activity 2-like 2, putative, expressed	gene	superkiller viralicidic activity 2-like 2, putative, expressed	chr12	10456373	10463605	+	CDS,promoter
3	LOC_Os08g13320	expressed protein	gene	expressed protein	chr8	7910803	7915508	+	three_prime_UTR
3	LOC_Os04g47530	transmembrane protein, putative, expressed	gene	transmembrane protein, putative, expressed	chr4	28006976	28011017	-	CDS,three_prime_UTR
3	LOC_Os07g20510	auxin efflux carrier, putative	gene	auxin efflux carrier, putative	chr7	11844868	11850643	+	CDS
3	LOC_Os01g70010	ribosomal protein L7Ae, putative, expressed	gene	ribosomal protein L7Ae, putative, expressed	chr1	40495083	40497236	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g22070	expressed protein	gene	expressed protein	chr2	13127049	13132579	+	CDS
3	LOC_Os02g23930	expressed protein	gene	expressed protein	chr2	13857982	13860767	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os02g57260	3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed	gene	3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed	chr2	35075010	35079332	-	CDS,downstream
3	LOC_Os10g29850	MBTB60 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed	gene	MBTB60 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed	chr10	15443486	15447933	-	five_prime_UTR,downstream
3	LOC_Os07g17130	FYVE zinc finger domain containing protein, expressed	gene	FYVE zinc finger domain containing protein, expressed	chr7	10063213	10067029	+	CDS
3	LOC_Os11g42790	transporter, monovalent cation:proton antiporter-2 family, putative, expressed	gene	transporter, monovalent cation:proton antiporter-2 family, putative, expressed	chr11	25302304	25306408	-	CDS,three_prime_UTR
3	LOC_Os04g51250	expressed protein	gene	expressed protein	chr4	30180806	30183729	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g57940	CK1_CaseinKinase_1a.4 - CK1 includes the casein kinase 1 kinases, expressed	gene	CK1_CaseinKinase_1a.4 - CK1 includes the casein kinase 1 kinases, expressed	chr3	32992372	32999768	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g14110	aminotransferase, classes I and II, domain containing protein, expressed	gene	aminotransferase, classes I and II, domain containing protein, expressed	chr2	7706618	7711597	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g10550	potassium transporter, putative, expressed	gene	potassium transporter, putative, expressed	chr8	6204951	6210534	+	CDS,three_prime_UTR
3	LOC_Os12g30620	tetratricopeptide-like helical, putative, expressed	gene	tetratricopeptide-like helical, putative, expressed	chr12	18359916	18362522	+	CDS,three_prime_UTR,promoter
3	LOC_Os07g06410	deoxyribonuclease tatD, putative, expressed	gene	deoxyribonuclease tatD, putative, expressed	chr7	3110636	3113419	+	three_prime_UTR,CDS,downstream
3	LOC_Os06g42720	amino acid transporter, putative, expressed	gene	amino acid transporter, putative, expressed	chr6	25689100	25692911	+	CDS,three_prime_UTR
3	LOC_Os07g19470	uncharacterized ACR, YggU family COG1872 containing protein, expressed	gene	uncharacterized ACR, YggU family COG1872 containing protein, expressed	chr7	11512909	11517213	-	CDS
3	LOC_Os02g49620	expressed protein	gene	expressed protein	chr2	30319915	30323597	+	CDS,promoter
3	LOC_Os09g32700	expressed protein	gene	expressed protein	chr9	19506638	19508782	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g24900	OsFBK22 - F-box domain and kelch repeat containing protein, expressed	gene	OsFBK22 - F-box domain and kelch repeat containing protein, expressed	chr10	12744508	12747671	-	CDS,three_prime_UTR
3	LOC_Os03g58910	expressed protein	gene	expressed protein	chr3	33523299	33537444	-	CDS,promoter
3	LOC_Os04g11430	disease resistance RPP13-like protein 1, putative	gene	disease resistance RPP13-like protein 1, putative	chr4	6246002	6248855	+	CDS,promoter
3	LOC_Os08g38210	transcription factor BIM2, putative, expressed	gene	transcription factor BIM2, putative, expressed	chr8	24219692	24226032	+	CDS
3	LOC_Os11g08660	TOPBP1A - Similar to DNA replication protein TOPBP1 from, expressed	gene	TOPBP1A - Similar to DNA replication protein TOPBP1 from, expressed	chr11	4610058	4618167	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g43830	hydrolase, alpha/beta fold family domain containing protein, expressed	gene	hydrolase, alpha/beta fold family domain containing protein, expressed	chr5	25414128	25421792	-	CDS
3	LOC_Os05g31680	expressed protein	gene	expressed protein	chr5	18372797	18377182	+	CDS,three_prime_UTR
3	LOC_Os07g36200	eukaryotic translation initiation factor-related, putative, expressed	gene	eukaryotic translation initiation factor-related, putative, expressed	chr7	21628478	21632110	+	CDS,promoter
3	LOC_Os04g37920	FAD binding domain of DNA photolyase domain containing protein, expressed	gene	FAD binding domain of DNA photolyase domain containing protein, expressed	chr4	22364786	22369967	+	CDS,three_prime_UTR
3	LOC_Os04g35910	coiled-coil domain-containing protein 55, putative, expressed	gene	coiled-coil domain-containing protein 55, putative, expressed	chr4	21721309	21724456	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g61010	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr3	34656213	34661093	+	CDS,downstream
3	LOC_Os08g39380	beta 1,2-xylosyltransferase, putative, expressed	gene	beta 1,2-xylosyltransferase, putative, expressed	chr8	24885047	24889197	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g44710	double-stranded RNA binding motif containing protein, expressed	gene	double-stranded RNA binding motif containing protein, expressed	chr4	26298988	26309459	+	CDS,three_prime_UTR
3	LOC_Os07g22650	expressed protein	gene	expressed protein	chr7	12762747	12765781	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g30410	expressed protein	gene	expressed protein	chr9	18507369	18509788	-	three_prime_UTR,downstream
3	LOC_Os12g40550	peptidase, putative, expressed	gene	peptidase, putative, expressed	chr12	25053367	25058018	-	CDS,three_prime_UTR
3	LOC_Os03g63010	plastid terminal oxidase, putative, expressed	gene	plastid terminal oxidase, putative, expressed	chr3	35618470	35622488	+	three_prime_UTR
3	LOC_Os05g29020	expressed protein	gene	expressed protein	chr5	16954286	16957961	+	CDS
3	LOC_Os12g41930	SRP40, C-terminal domain containing protein, expressed	gene	SRP40, C-terminal domain containing protein, expressed	chr12	25956458	25959754	+	CDS,three_prime_UTR
3	LOC_Os09g33670	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr9	19877907	19881725	+	CDS,three_prime_UTR
3	LOC_Os01g05640	receptor-like protein kinase 5 precursor, putative, expressed	gene	receptor-like protein kinase 5 precursor, putative, expressed	chr1	2687623	2691186	-	CDS
3	LOC_Os02g10440	protein with a conserved N-terminal region, putative, expressed	gene	protein with a conserved N-terminal region, putative, expressed	chr2	5482728	5489303	+	CDS,three_prime_UTR
3	LOC_Os07g38970	succinyl-CoA ligase subunit alpha-2, mitochondrial precursor, putative, expressed	gene	succinyl-CoA ligase subunit alpha-2, mitochondrial precursor, putative, expressed	chr7	23360141	23365051	+	CDS,three_prime_UTR
3	LOC_Os11g28350	CDK-activating kinase assembly factor MAT1 family protein, expressed	gene	CDK-activating kinase assembly factor MAT1 family protein, expressed	chr11	15844486	15846993	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g10910	ATEXO70F1, putative, expressed	gene	ATEXO70F1, putative, expressed	chr7	5971102	5976583	+	CDS,three_prime_UTR
3	LOC_Os11g44950	glycosyl hydrolase family 3 protein, putative, expressed	gene	glycosyl hydrolase family 3 protein, putative, expressed	chr11	26731932	26738965	-	CDS,five_prime_UTR
3	LOC_Os02g39340	glycine-rich protein, putative, expressed	gene	glycine-rich protein, putative, expressed	chr2	23739367	23743105	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g40670	single myb histone, putative, expressed	gene	single myb histone, putative, expressed	chr1	22987185	22991424	+	CDS,three_prime_UTR,promoter
3	LOC_Os09g03210	expressed protein	gene	expressed protein	chr9	1545433	1548533	+	CDS
3	LOC_Os02g15594	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr2	8760001	8766267	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g68120	DCL3, putative, expressed	gene	DCL3, putative, expressed	chr1	39594638	39604674	-	CDS,three_prime_UTR
3	LOC_Os11g02660	hydrolase, alpha/beta fold family domain containing protein, expressed	gene	hydrolase, alpha/beta fold family domain containing protein, expressed	chr11	850566	854102	+	CDS
3	LOC_Os05g34270	inactive receptor kinase At1g27190 precursor, putative, expressed	gene	inactive receptor kinase At1g27190 precursor, putative, expressed	chr5	20220726	20224481	-	CDS
3	LOC_Os01g61590	CAMK_CAMK_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr1	35618641	35624750	+	CDS
3	LOC_Os04g53230	aminomethyltransferase, putative, expressed	gene	aminomethyltransferase, putative, expressed	chr4	31515800	31518510	+	CDS,promoter
3	LOC_Os01g01070	expressed protein	gene	expressed protein	chr1	28818	33493	+	CDS,three_prime_UTR,promoter
3	LOC_Os11g03680	OsFBX395 - F-box domain containing protein, expressed	gene	OsFBX395 - F-box domain containing protein, expressed	chr11	1432751	1434204	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g30020	anthranilate phosphoribosyltransferase, putative, expressed	gene	anthranilate phosphoribosyltransferase, putative, expressed	chr7	17686056	17691503	-	CDS,three_prime_UTR
3	LOC_Os01g40280	integral membrane protein, putative, expressed	gene	integral membrane protein, putative, expressed	chr1	22741475	22746140	+	CDS
3	LOC_Os02g56510	phosphate transporter 1, putative, expressed	gene	phosphate transporter 1, putative, expressed	chr2	34603539	34609797	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g43470	outer membrane protein, OMP85 family, putative, expressed	gene	outer membrane protein, OMP85 family, putative, expressed	chr5	25205321	25209640	-	CDS,three_prime_UTR
3	LOC_Os04g31270	EMB1688, putative, expressed	gene	EMB1688, putative, expressed	chr4	18530753	18535774	+	CDS,three_prime_UTR
3	LOC_Os01g73800	expressed protein	gene	expressed protein	chr1	42751937	42756142	-	CDS,three_prime_UTR
3	LOC_Os12g02060	peroxidase precursor, putative	gene	peroxidase precursor, putative	chr12	613316	614845	+	CDS,promoter,downstream
3	LOC_Os01g21990	CRS2-associated factor 2, chloroplast precursor, putative, expressed	gene	CRS2-associated factor 2, chloroplast precursor, putative, expressed	chr1	12343434	12350207	+	CDS
3	LOC_Os09g07020	oxidoreductase, putative, expressed	gene	oxidoreductase, putative, expressed	chr9	3403354	3407176	-	CDS
3	LOC_Os02g47400	pectinacetylesterase domain containing protein, expressed	gene	pectinacetylesterase domain containing protein, expressed	chr2	28929567	28933403	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g39090	CAMK_CAMK_like.29 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.29 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr5	22856751	22861863	-	CDS
3	LOC_Os03g64320	expressed protein	gene	expressed protein	chr3	36340672	36351479	+	CDS,promoter
3	LOC_Os05g05260	helicase, putative, expressed	gene	helicase, putative, expressed	chr5	2584774	2590096	-	CDS,three_prime_UTR
3	LOC_Os05g02970	expressed protein	gene	expressed protein	chr5	1103381	1105213	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g36820	uncharacterized Cys-rich domain containing protein, putative, expressed	gene	uncharacterized Cys-rich domain containing protein, putative, expressed	chr7	22055418	22058759	-	three_prime_UTR,CDS
3	LOC_Os07g02350	casein kinase II subunit alpha-2, putative, expressed	gene	casein kinase II subunit alpha-2, putative, expressed	chr7	798478	804187	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g34860	palmitoyltransferase TIP1, putative, expressed	gene	palmitoyltransferase TIP1, putative, expressed	chr11	19959764	19966190	+	CDS,three_prime_UTR
3	LOC_Os01g65410	serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed	gene	serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed	chr1	37961499	37965765	+	CDS,three_prime_UTR
3	LOC_Os02g39820	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr2	24053319	24056852	+	CDS,downstream
3	LOC_Os05g47630	peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed	gene	peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed	chr5	27224393	27227233	+	CDS,three_prime_UTR
3	LOC_Os05g04940	RNA methyltransferase, TrmH family protein, putative, expressed	gene	RNA methyltransferase, TrmH family protein, putative, expressed	chr5	2378471	2381813	-	CDS,downstream
3	LOC_Os02g49450	BSD domain-containing protein, putative, expressed	gene	BSD domain-containing protein, putative, expressed	chr2	30214659	30218121	+	CDS
3	LOC_Os01g67880	vacuolar protein sorting-associated protein 53, putative, expressed	gene	vacuolar protein sorting-associated protein 53, putative, expressed	chr1	39448618	39453688	-	CDS
3	LOC_Os03g16369	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr3	9027709	9034275	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g02440	expressed protein	gene	expressed protein	chr6	839885	843186	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g16540	NEDD8-activating enzyme E1 catalytic subunit, putative, expressed	gene	NEDD8-activating enzyme E1 catalytic subunit, putative, expressed	chr1	9385170	9389611	+	CDS
3	LOC_Os08g06480	lissencephaly type-1-like homology motif, putative, expressed	gene	lissencephaly type-1-like homology motif, putative, expressed	chr8	3666095	3674816	+	CDS,three_prime_UTR
3	LOC_Os03g31320	RING zinc finger protein-like, putative, expressed	gene	RING zinc finger protein-like, putative, expressed	chr3	17849271	17852521	-	five_prime_UTR
3	LOC_Os04g47680	Ser/Thr-rich protein T10 in DGCR region, putative, expressed	gene	Ser/Thr-rich protein T10 in DGCR region, putative, expressed	chr4	28104960	28107134	+	three_prime_UTR
3	LOC_Os11g38970	hypothetical protein	gene	hypothetical protein	chr11	22723403	22724663	+	CDS,promoter,downstream
3	LOC_Os06g03930	cytochrome P450 86A1, putative, expressed	gene	cytochrome P450 86A1, putative, expressed	chr6	1580992	1584823	-	CDS,three_prime_UTR
3	LOC_Os06g05980	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr6	2742657	2748243	+	CDS,three_prime_UTR
3	LOC_Os10g34540	tetratricopeptide repeat protein 1, putative, expressed	gene	tetratricopeptide repeat protein 1, putative, expressed	chr10	18349270	18353990	+	CDS
3	LOC_Os10g34320	ribosomal L18p/L5e family protein, expressed	gene	ribosomal L18p/L5e family protein, expressed	chr10	18229995	18233328	-	CDS,three_prime_UTR
3	LOC_Os12g04440	2-isopropylmalate synthase B, putative, expressed	gene	2-isopropylmalate synthase B, putative, expressed	chr12	1887941	1893918	+	CDS,three_prime_UTR
3	LOC_Os12g01170	FGFR1 oncogene partner, putative, expressed	gene	FGFR1 oncogene partner, putative, expressed	chr12	95642	99000	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g46600	acidic leucine-rich nuclear phosphoprotein 32-related protein 2, putative, expressed	gene	acidic leucine-rich nuclear phosphoprotein 32-related protein 2, putative, expressed	chr3	26370745	26372962	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g65720	expressed protein	gene	expressed protein	chr1	38153102	38156068	+	CDS,three_prime_UTR
3	LOC_Os12g02380	elongation factor P, putative, expressed	gene	elongation factor P, putative, expressed	chr12	775593	778942	+	CDS,downstream
3	LOC_Os06g04910	hydrolase, NUDIX family protein, expressed	gene	hydrolase, NUDIX family protein, expressed	chr6	2156496	2159577	-	CDS,three_prime_UTR
3	LOC_Os04g35260	DEAD/DEAH box helicase domain containing protein, expressed	gene	DEAD/DEAH box helicase domain containing protein, expressed	chr4	21257529	21273473	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g14830	GHMP kinases ATP-binding protein, putative, expressed	gene	GHMP kinases ATP-binding protein, putative, expressed	chr3	8066425	8070764	-	CDS,three_prime_UTR
3	LOC_Os04g32580	expressed protein	gene	expressed protein	chr4	19438450	19440745	+	CDS,downstream
3	LOC_Os01g58080	membrane-associated salt-inducible protein, putative, expressed	gene	membrane-associated salt-inducible protein, putative, expressed	chr1	33592700	33596295	+	three_prime_UTR,downstream
3	LOC_Os12g41830	Methyltransferase small domain containing protein, expressed	gene	Methyltransferase small domain containing protein, expressed	chr12	25877582	25881037	-	CDS
3	LOC_Os10g29170	transposon protein, putative, Ac/Ds sub-class	gene	transposon protein, putative, Ac/Ds sub-class	chr10	15119773	15123348	-	CDS
3	LOC_Os02g18140	NBS type disease resistance protein, putative, expressed	gene	NBS type disease resistance protein, putative, expressed	chr2	10535633	10539697	+	CDS,downstream
3	LOC_Os10g20250	membrane associated DUF588 domain containing protein, putative, expressed	gene	membrane associated DUF588 domain containing protein, putative, expressed	chr10	10103343	10106147	-	three_prime_UTR,promoter
3	LOC_Os02g29220	expressed protein	gene	expressed protein	chr2	17331725	17336217	+	CDS
3	LOC_Os09g23650	FAM10 family protein, putative, expressed	gene	FAM10 family protein, putative, expressed	chr9	14050155	14059144	-	CDS,promoter
3	LOC_Os08g33810	lipoate protein ligase, putative, expressed	gene	lipoate protein ligase, putative, expressed	chr8	21162293	21167046	-	CDS,three_prime_UTR
3	LOC_Os06g13810	pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta, putative, expressed	gene	pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta, putative, expressed	chr6	7647923	7653387	-	CDS
3	LOC_Os02g33420	ATPase, AAA family protein, expressed	gene	ATPase, AAA family protein, expressed	chr2	19854206	19858757	+	CDS
3	LOC_Os01g01610	IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed	gene	IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed	chr1	305869	307842	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g24020	dihydrodipicolinate reductase, putative, expressed	gene	dihydrodipicolinate reductase, putative, expressed	chr2	13911365	13917195	-	CDS,three_prime_UTR
3	LOC_Os05g28690	expressed protein	gene	expressed protein	chr5	16769767	16779644	+	CDS,three_prime_UTR
3	LOC_Os07g28590	transposon protein, putative, CACTA, En/Spm sub-class	gene	transposon protein, putative, CACTA, En/Spm sub-class	chr7	16729833	16731704	+	CDS,downstream
3	LOC_Os11g05140	expressed protein	gene	expressed protein	chr11	2253061	2257005	-	three_prime_UTR
3	LOC_Os03g13720	expressed protein	gene	expressed protein	chr3	7429592	7432593	+	CDS,downstream
3	LOC_Os11g06800	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr11	3326426	3327298	+	CDS,promoter
3	LOC_Os07g37830	peptidyl-prolyl cis-trans isomerase CYP37, chloroplast precursor, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase CYP37, chloroplast precursor, putative, expressed	chr7	22687907	22693499	+	CDS
3	LOC_Os09g12600	phosphate/phosphate translocator, putative, expressed	gene	phosphate/phosphate translocator, putative, expressed	chr9	7221175	7224657	-	CDS,three_prime_UTR
3	LOC_Os08g01290	OsFBT12 - F-box and tubby domain containing protein, expressed	gene	OsFBT12 - F-box and tubby domain containing protein, expressed	chr8	185944	190880	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g58150	transmembrane BAX inhibitor motif-containing protein, putative, expressed	gene	transmembrane BAX inhibitor motif-containing protein, putative, expressed	chr3	33095892	33098313	-	CDS,three_prime_UTR
3	LOC_Os08g13900	expressed protein	gene	expressed protein	chr8	8299963	8301150	-	CDS,promoter
3	LOC_Os06g28334	unknown	gene	unknown	chr6	16099221	16101051	-	three_prime_UTR,promoter
3	LOC_Os06g13060	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr6	7158989	7163157	-	CDS,three_prime_UTR
3	LOC_Os03g44830	OsRhmbd9 - Putative Rhomboid homologue, expressed	gene	OsRhmbd9 - Putative Rhomboid homologue, expressed	chr3	25277491	25284468	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g31120	OsFBK14 - F-box domain and kelch repeat containing protein, expressed	gene	OsFBK14 - F-box domain and kelch repeat containing protein, expressed	chr4	18430709	18438358	-	five_prime_UTR,CDS
3	LOC_Os08g33430	formin, putative, expressed	gene	formin, putative, expressed	chr8	20852449	20855501	+	five_prime_UTR,CDS,promoter,downstream
3	LOC_Os03g43990	BTBN8 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed	gene	BTBN8 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed	chr3	24699142	24704807	-	CDS
3	LOC_Os07g41564	DEAD/DEAH box helicase domain protein, putative	gene	DEAD/DEAH box helicase domain protein, putative	chr7	24907638	24914950	+	CDS,downstream
3	LOC_Os09g29070	glucose-6-phosphate isomerase, putative, expressed	gene	glucose-6-phosphate isomerase, putative, expressed	chr9	17647470	17652620	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g08280	inositol-1-monophosphatase, putative, expressed	gene	inositol-1-monophosphatase, putative, expressed	chr12	4215551	4218472	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g42030	peroxidase precursor, putative, expressed	gene	peroxidase precursor, putative, expressed	chr8	26544033	26547092	-	three_prime_UTR,promoter
3	LOC_Os09g32090	methyl-binding domain protein MBD, putative, expressed	gene	methyl-binding domain protein MBD, putative, expressed	chr9	19150058	19155470	-	CDS,three_prime_UTR
3	LOC_Os07g36470	vacuolar ATP synthase subunit H, putative, expressed	gene	vacuolar ATP synthase subunit H, putative, expressed	chr7	21818394	21821395	+	CDS
3	LOC_Os05g09000	expressed protein	gene	expressed protein	chr5	4983529	4986891	-	CDS,five_prime_UTR
3	LOC_Os02g38920	glyceraldehyde-3-phosphate dehydrogenase, putative, expressed	gene	glyceraldehyde-3-phosphate dehydrogenase, putative, expressed	chr2	23521248	23524666	+	CDS,three_prime_UTR
3	LOC_Os06g14060	MBTB10 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed	gene	MBTB10 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed	chr6	7840700	7843835	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os05g06660	OsSCP26 - Putative Serine Carboxypeptidase homologue, expressed	gene	OsSCP26 - Putative Serine Carboxypeptidase homologue, expressed	chr5	3439187	3443746	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g24870	bromodomain domain containing protein, expressed	gene	bromodomain domain containing protein, expressed	chr6	14583463	14589227	+	CDS,three_prime_UTR
3	LOC_Os06g01680	expressed protein	gene	expressed protein	chr6	402722	409270	+	CDS,three_prime_UTR
3	LOC_Os07g07040	erythrocyte binding protein 3, putative, expressed	gene	erythrocyte binding protein 3, putative, expressed	chr7	3468428	3470636	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g58530	ES43 protein, putative, expressed	gene	ES43 protein, putative, expressed	chr3	33321084	33326291	+	CDS,three_prime_UTR,promoter
3	LOC_Os10g28040	histone acetyltransferase GCN5, putative, expressed	gene	histone acetyltransferase GCN5, putative, expressed	chr10	14477875	14484313	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g52380	methyl-CpG binding domain containing protein, putative, expressed	gene	methyl-CpG binding domain containing protein, putative, expressed	chr4	30934293	30939041	-	CDS,three_prime_UTR
3	LOC_Os08g16580	Cf2/Cf5 disease resistance protein, putative, expressed	gene	Cf2/Cf5 disease resistance protein, putative, expressed	chr8	10141397	10143781	-	CDS,promoter
3	LOC_Os07g49300	expressed protein	gene	expressed protein	chr7	29521450	29529781	+	CDS,three_prime_UTR
3	LOC_Os03g19280	argininosuccinate lyase, putative, expressed	gene	argininosuccinate lyase, putative, expressed	chr3	10841946	10846379	+	CDS,three_prime_UTR
3	LOC_Os11g01860	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr11	453617	456054	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g34380	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr10	18249679	18260338	-	CDS,three_prime_UTR,downstream
3	LOC_Os07g31290	tyrosine protein kinase domain containing protein, putative	gene	tyrosine protein kinase domain containing protein, putative	chr7	18527515	18530804	+	CDS,promoter,downstream
3	LOC_Os05g31254	acetyltransferase, GNAT family, putative, expressed	gene	acetyltransferase, GNAT family, putative, expressed	chr5	18109856	18122349	-	CDS
3	LOC_Os02g01220	rhodanese-like domain containing protein, putative, expressed	gene	rhodanese-like domain containing protein, putative, expressed	chr2	124645	127637	+	three_prime_UTR,downstream
3	LOC_Os11g01830	staphylococcal nuclease homologue, putative, expressed	gene	staphylococcal nuclease homologue, putative, expressed	chr11	437859	443969	+	CDS,downstream
3	LOC_Os05g33710	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr5	19775265	19784068	-	CDS
3	LOC_Os01g56000	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr1	32240191	32249744	+	CDS
3	LOC_Os03g18430	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr3	10332127	10335859	-	CDS
3	LOC_Os04g53550	ABC transporter, ATP-binding protein, putative	gene	ABC transporter, ATP-binding protein, putative	chr4	31740550	31743491	-	CDS,promoter
3	LOC_Os04g01320	serine/threonine-protein kinase receptor precursor, putative, expressed	gene	serine/threonine-protein kinase receptor precursor, putative, expressed	chr4	245303	248229	-	CDS
3	LOC_Os03g59760	RING finger protein 126, putative, expressed	gene	RING finger protein 126, putative, expressed	chr3	34024322	34027118	+	three_prime_UTR,downstream
3	LOC_Os01g13270	AGC_PVPK_like_kin82y.4 - ACG kinases include homologs to PKA, PKG and PKC, expressed	gene	AGC_PVPK_like_kin82y.4 - ACG kinases include homologs to PKA, PKG and PKC, expressed	chr1	7399509	7403312	+	three_prime_UTR,downstream
3	LOC_Os03g50220	homologous-pairing protein meu13, putative, expressed	gene	homologous-pairing protein meu13, putative, expressed	chr3	28625607	28629329	-	CDS,three_prime_UTR
3	LOC_Os12g01380	 proteins of unknown function domain containing protein, expressed	gene	 proteins of unknown function domain containing protein, expressed	chr12	241968	246389	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g33770	importin-beta N-terminal domain containing protein	gene	importin-beta N-terminal domain containing protein	chr10	17786982	17801650	+	CDS
3	LOC_Os06g10410	uncharacterized mscS family protein, putative, expressed	gene	uncharacterized mscS family protein, putative, expressed	chr6	5344378	5347680	-	CDS
3	LOC_Os08g43360	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr8	27395234	27399507	+	three_prime_UTR
3	LOC_Os05g46330	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr5	26787165	26794403	+	CDS
3	LOC_Os09g31090	HECT-domain domain containing protein, expressed	gene	HECT-domain domain containing protein, expressed	chr9	18686739	18693227	-	three_prime_UTR
3	LOC_Os05g27920	phox domain-containing protein, putative, expressed	gene	phox domain-containing protein, putative, expressed	chr5	16231726	16239175	+	CDS,downstream
3	LOC_Os05g02990	expressed protein	gene	expressed protein	chr5	1115757	1118046	+	CDS,three_prime_UTR
3	LOC_Os04g42490	DIE2/ALG10 family, putative, expressed	gene	DIE2/ALG10 family, putative, expressed	chr4	24960738	24964468	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g17980	CAMK_KIN1/SNF1/Nim1_like_AMPKh.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_KIN1/SNF1/Nim1_like_AMPKh.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr3	10005323	10010960	+	CDS,three_prime_UTR
3	LOC_Os12g32950	membrane protein, putative, expressed	gene	membrane protein, putative, expressed	chr12	19874818	19877981	-	CDS,three_prime_UTR
3	LOC_Os08g33160	ZIM motif family protein, expressed	gene	ZIM motif family protein, expressed	chr8	20622190	20625233	-	three_prime_UTR
3	LOC_Os01g43050	CENP-C1, putative, expressed	gene	CENP-C1, putative, expressed	chr1	24558285	24567619	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g01044	isoflavone reductase, putative, expressed	gene	isoflavone reductase, putative, expressed	chr10	44941	57338	-	CDS
3	LOC_Os04g55180	hydrolase, alpha/beta fold family domain containing protein, expressed	gene	hydrolase, alpha/beta fold family domain containing protein, expressed	chr4	32615959	32622416	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g37260	OsFBX14 - F-box domain containing protein, expressed	gene	OsFBX14 - F-box domain containing protein, expressed	chr1	20804745	20809121	+	CDS
3	LOC_Os03g16730	expressed protein	gene	expressed protein	chr3	9265153	9268802	+	CDS,downstream
3	LOC_Os02g10640	26S protease regulatory subunit, putative, expressed	gene	26S protease regulatory subunit, putative, expressed	chr2	5595400	5600889	-	CDS,three_prime_UTR
3	LOC_Os02g32120	cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed	gene	cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed	chr2	18974969	18978338	-	CDS,three_prime_UTR
3	LOC_Os03g62040	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr3	35143207	35146019	+	five_prime_UTR,CDS
3	LOC_Os02g44780	polyprenyl synthetase, putative, expressed	gene	polyprenyl synthetase, putative, expressed	chr2	27114693	27118593	-	three_prime_UTR
3	LOC_Os02g30630	thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed	gene	thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed	chr2	18230156	18232507	+	three_prime_UTR,downstream
3	LOC_Os09g38330	MORN repeat domain containing protein, expressed	gene	MORN repeat domain containing protein, expressed	chr9	22047983	22056548	-	CDS,three_prime_UTR
3	LOC_Os03g22690	nucleoporin interacting component, putative, expressed	gene	nucleoporin interacting component, putative, expressed	chr3	13099042	13108070	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os10g01060	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr10	66119	71971	+	CDS
3	LOC_Os05g45050	reticulon domain containing protein, putative, expressed	gene	reticulon domain containing protein, putative, expressed	chr5	26117508	26119774	-	three_prime_UTR,promoter
3	LOC_Os09g15750	proteasome/cyclosome repeat containing protein, expressed	gene	proteasome/cyclosome repeat containing protein, expressed	chr9	9619370	9627790	+	CDS,three_prime_UTR
3	LOC_Os07g42380	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr7	25356847	25361773	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g53750	retrotransposon protein, putative, Ty3-gypsy subclass, expressed	gene	retrotransposon protein, putative, Ty3-gypsy subclass, expressed	chr4	31838751	31847378	+	CDS,downstream
3	LOC_Os02g53260	acetyltransferase, GNAT family, putative, expressed	gene	acetyltransferase, GNAT family, putative, expressed	chr2	32591624	32594478	+	three_prime_UTR,downstream
3	LOC_Os03g04960	cysteinyl-tRNA synthetase, putative, expressed	gene	cysteinyl-tRNA synthetase, putative, expressed	chr3	2395735	2399591	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g30519	expressed protein	gene	expressed protein	chr3	17408801	17411764	-	three_prime_UTR
3	LOC_Os03g12000	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr3	6285011	6287451	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g52450	GATA transcription factor 25, putative, expressed	gene	GATA transcription factor 25, putative, expressed	chr3	30087331	30092131	-	CDS,downstream
3	LOC_Os08g12850	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr8	7615776	7619297	-	CDS,three_prime_UTR
3	LOC_Os10g40260	expressed protein	gene	expressed protein	chr10	21497817	21509173	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g09340	plasma membrane ATPase, putative, expressed	gene	plasma membrane ATPase, putative, expressed	chr7	4913609	4919789	+	CDS
3	LOC_Os08g31930	BRCA1 C Terminus domain containing protein, expressed	gene	BRCA1 C Terminus domain containing protein, expressed	chr8	19793736	19798449	+	CDS
3	LOC_Os12g42110	phosphonate metabolism protein-related, putative	gene	phosphonate metabolism protein-related, putative	chr12	26076275	26082246	-	three_prime_UTR
3	LOC_Os02g03250	expressed protein	gene	expressed protein	chr2	1302273	1304324	+	three_prime_UTR,downstream
3	LOC_Os03g32330	expressed protein	gene	expressed protein	chr3	18494588	18499925	+	three_prime_UTR
3	LOC_Os01g70780	WD40-like domain containing protein, putative, expressed	gene	WD40-like domain containing protein, putative, expressed	chr1	40965616	40970049	-	CDS,three_prime_UTR
3	LOC_Os08g15460	preprotein translocase subunit secY, putative, expressed	gene	preprotein translocase subunit secY, putative, expressed	chr8	9404692	9413830	+	three_prime_UTR
3	LOC_Os09g29950	OsPOP19 - Putative Prolyl Oligopeptidase homologue, expressed	gene	OsPOP19 - Putative Prolyl Oligopeptidase homologue, expressed	chr9	18222856	18229941	-	CDS
3	LOC_Os12g29760	oxidoreductase, aldo/keto reductase family protein, putative, expressed	gene	oxidoreductase, aldo/keto reductase family protein, putative, expressed	chr12	17760106	17762545	-	three_prime_UTR,promoter
3	LOC_Os01g65210	proton-dependent oligopeptide transport, putative, expressed	gene	proton-dependent oligopeptide transport, putative, expressed	chr1	37836094	37842621	+	CDS,promoter,downstream
3	LOC_Os02g46320	glucosyltransferase, putative, expressed	gene	glucosyltransferase, putative, expressed	chr2	28227792	28231347	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g35060	Ser/Thr protein phosphatase family protein, putative, expressed	gene	Ser/Thr protein phosphatase family protein, putative, expressed	chr10	18631725	18634792	-	CDS,three_prime_UTR
3	LOC_Os06g12070	mTERF family protein, expressed	gene	mTERF family protein, expressed	chr6	6464598	6467063	-	three_prime_UTR
3	LOC_Os09g19900	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr9	11908037	11911723	-	three_prime_UTR,promoter,downstream
3	LOC_Os11g10070	transcriptional corepressor SEUSS, putative, expressed	gene	transcriptional corepressor SEUSS, putative, expressed	chr11	5416079	5422928	+	CDS,downstream
3	LOC_Os07g26930	expressed protein	gene	expressed protein	chr7	15597021	15599616	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g07070	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr5	3718255	3725397	-	five_prime_UTR,CDS,downstream
3	LOC_Os11g01200	senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed	gene	senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed	chr11	116155	123610	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g37900	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr5	22146015	22149874	+	CDS,three_prime_UTR
3	LOC_Os03g57560	piwi domain containing protein, expressed	gene	piwi domain containing protein, expressed	chr3	32806850	32815850	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g56150	expressed protein	gene	expressed protein	chr2	34352419	34354559	-	five_prime_UTR,CDS,downstream
3	LOC_Os12g31440	expressed protein	gene	expressed protein	chr12	18880266	18884453	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g51000	3,4-dihydroxy-2-butanone kinase, putative, expressed	gene	3,4-dihydroxy-2-butanone kinase, putative, expressed	chr3	29130715	29138604	-	CDS
3	LOC_Os04g55670	glycosyltransferase family 43 protein, putative, expressed	gene	glycosyltransferase family 43 protein, putative, expressed	chr4	32951959	32955151	-	CDS,three_prime_UTR
3	LOC_Os02g32520	ERD1 protein, chloroplast precursor, putative, expressed	gene	ERD1 protein, chloroplast precursor, putative, expressed	chr2	19245477	19250435	+	CDS,downstream
3	LOC_Os11g40200	expressed protein	gene	expressed protein	chr11	23510657	23513726	+	three_prime_UTR,downstream
3	LOC_Os01g18880	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	gene	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	chr1	10674143	10678804	+	three_prime_UTR
3	LOC_Os04g30910	SAM domain family protein, expressed	gene	SAM domain family protein, expressed	chr4	18296273	18301860	+	CDS,three_prime_UTR
3	LOC_Os05g47490	MDR-like ABC transporter, putative, expressed	gene	MDR-like ABC transporter, putative, expressed	chr5	27140975	27147371	+	CDS,downstream
3	LOC_Os06g07830	ANTH/ENTH domain containing protein, putative, expressed	gene	ANTH/ENTH domain containing protein, putative, expressed	chr6	3800207	3806785	-	CDS
3	LOC_Os09g21689	expressed protein	gene	expressed protein	chr9	13139414	13146177	-	three_prime_UTR
3	LOC_Os07g38060	expressed protein	gene	expressed protein	chr7	22816185	22821182	-	CDS
3	LOC_Os02g05320	phosphatidate cytidylyltransferase family protein, putative, expressed	gene	phosphatidate cytidylyltransferase family protein, putative, expressed	chr2	2551617	2556276	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os12g02730	histidine triad family protein, putative	gene	histidine triad family protein, putative	chr12	963545	965927	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g20660	UPF0041 domain containing protein, putative, expressed	gene	UPF0041 domain containing protein, putative, expressed	chr9	12442360	12444865	-	three_prime_UTR,CDS
3	LOC_Os01g31494	conserved hypothetical protein	gene	conserved hypothetical protein	chr1	17225615	17227652	-	CDS,downstream
3	LOC_Os01g44040	CAS1 domain-containing protein 1 precursor, putative, expressed	gene	CAS1 domain-containing protein 1 precursor, putative, expressed	chr1	25225621	25232734	+	CDS,three_prime_UTR
3	LOC_Os05g50260	polygalacturonase, putative, expressed	gene	polygalacturonase, putative, expressed	chr5	28739219	28741646	-	five_prime_UTR,CDS
3	LOC_Os05g08610	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr5	4710558	4715362	+	five_prime_UTR,CDS
3	LOC_Os12g32240	eukaryotic translation initiation factor 5A, putative, expressed	gene	eukaryotic translation initiation factor 5A, putative, expressed	chr12	19434135	19437190	+	CDS,three_prime_UTR
3	LOC_Os01g52290	expressed protein	gene	expressed protein	chr1	30056963	30059918	+	five_prime_UTR,promoter
3	LOC_Os04g42910	expressed protein	gene	expressed protein	chr4	25200295	25203637	+	CDS,three_prime_UTR
3	LOC_Os11g01170	tonneau 1b, putative, expressed	gene	tonneau 1b, putative, expressed	chr11	99824	103177	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g57080	PLA IIIA/PLP7, putative, expressed	gene	PLA IIIA/PLP7, putative, expressed	chr3	32533683	32535447	-	three_prime_UTR,promoter
3	LOC_Os07g25390	DRD1, putative, expressed	gene	DRD1, putative, expressed	chr7	14504913	14511583	-	CDS,three_prime_UTR
3	LOC_Os03g15650	vacuolar sorting protein, putative, expressed	gene	vacuolar sorting protein, putative, expressed	chr3	8628699	8634103	+	CDS,three_prime_UTR,five_prime_UTR
3	LOC_Os06g09290	26S protease regulatory subunit 7, putative, expressed	gene	26S protease regulatory subunit 7, putative, expressed	chr6	4666487	4669981	+	CDS,promoter
3	LOC_Os02g05370	retrotransposon protein, putative, Ty3-gypsy subclass, expressed	gene	retrotransposon protein, putative, Ty3-gypsy subclass, expressed	chr2	2582087	2586195	+	CDS
3	LOC_Os11g03640	conserved hypothetical protein	gene	conserved hypothetical protein	chr11	1410111	1412555	-	CDS,promoter
3	LOC_Os01g60250	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr1	34840573	34844567	-	three_prime_UTR
3	LOC_Os11g06930	CBS domain-containing protein, putative, expressed	gene	CBS domain-containing protein, putative, expressed	chr11	3414438	3419913	-	CDS,three_prime_UTR
3	LOC_Os03g60690	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr3	34486098	34489727	-	CDS,three_prime_UTR,downstream
3	LOC_Os11g09418	OsFBX399 - F-box domain containing protein, expressed	gene	OsFBX399 - F-box domain containing protein, expressed	chr11	5055940	5060443	+	CDS
3	LOC_Os10g32300	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr10	16879961	16885689	-	CDS
3	LOC_Os01g59990	ribosomal protein L24, putative, expressed	gene	ribosomal protein L24, putative, expressed	chr1	34681475	34684442	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os10g34360	stilbene synthase, putative, expressed	gene	stilbene synthase, putative, expressed	chr10	18244882	18247338	+	CDS,three_prime_UTR
3	LOC_Os05g32190	tungus CG8253-PA, putative, expressed	gene	tungus CG8253-PA, putative, expressed	chr5	18706523	18709597	-	CDS
3	LOC_Os03g60610	SEC14 cytosolic factor family protein, putative, expressed	gene	SEC14 cytosolic factor family protein, putative, expressed	chr3	34432224	34437311	-	CDS,three_prime_UTR
3	LOC_Os02g56990	ribosomal protein L37, putative, expressed	gene	ribosomal protein L37, putative, expressed	chr2	34912242	34914279	+	CDS,three_prime_UTR,promoter
3	LOC_Os05g28180	AMP deaminase, putative, expressed	gene	AMP deaminase, putative, expressed	chr5	16420105	16428026	-	CDS,three_prime_UTR
3	LOC_Os02g24205	expressed protein	gene	expressed protein	chr2	14014679	14016570	-	three_prime_UTR,promoter
3	LOC_Os03g22180	60S ribosomal protein L18-3, putative, expressed	gene	60S ribosomal protein L18-3, putative, expressed	chr3	12714589	12717094	-	CDS,three_prime_UTR,downstream
3	LOC_Os08g16880	sas10/Utp3 family protein, expressed	gene	sas10/Utp3 family protein, expressed	chr8	10328372	10334447	+	three_prime_UTR
3	LOC_Os07g34750	expressed protein	gene	expressed protein	chr7	20817891	20821112	-	CDS,promoter
3	LOC_Os04g34000	digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed	gene	digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed	chr4	20415062	20421284	+	CDS,three_prime_UTR
3	LOC_Os03g61080	expressed protein	gene	expressed protein	chr3	34693708	34698331	-	CDS
3	LOC_Os03g57500	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr3	32776176	32780190	-	CDS,three_prime_UTR
3	LOC_Os08g07290	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr8	4068811	4076666	-	CDS,promoter
3	LOC_Os09g25990	glutamate receptor, putative	gene	glutamate receptor, putative	chr9	15609714	15615400	-	CDS,downstream
3	LOC_Os01g49670	cytidylyltransferase domain containing protein, expressed	gene	cytidylyltransferase domain containing protein, expressed	chr1	28540491	28544379	-	three_prime_UTR,CDS,promoter
3	LOC_Os03g62030	expressed protein	gene	expressed protein	chr3	35140110	35142674	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g55159	LTPL125 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed	gene	LTPL125 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed	chr4	32607093	32609055	-	three_prime_UTR,promoter
3	LOC_Os03g60590	actin-depolymerizing factor, putative, expressed	gene	actin-depolymerizing factor, putative, expressed	chr3	34424531	34427186	+	three_prime_UTR,downstream
3	LOC_Os03g52980	CWF19-like 2, cell cycle control, putative, expressed	gene	CWF19-like 2, cell cycle control, putative, expressed	chr3	30379504	30384884	+	CDS,three_prime_UTR,promoter
3	LOC_Os06g11020	tic22-like family domain containing protein, expressed	gene	tic22-like family domain containing protein, expressed	chr6	5772406	5776317	-	three_prime_UTR
3	LOC_Os01g55270	SGS domain containing protein, expressed	gene	SGS domain containing protein, expressed	chr1	31810301	31813549	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g17010	phospholipid-transporting ATPase, putative, expressed	gene	phospholipid-transporting ATPase, putative, expressed	chr1	9737418	9743704	-	CDS,promoter
3	LOC_Os02g07220	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	chr2	3711141	3713437	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g42730	expressed protein	gene	expressed protein	chr3	23787416	23789569	-	CDS,downstream
3	LOC_Os11g34750	ABC1 family domain containing protein, putative, expressed	gene	ABC1 family domain containing protein, putative, expressed	chr11	19893841	19903547	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g44170	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr12	27364976	27369815	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g44210	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr6	26664148	26668595	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g31460	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr12	18889665	18892125	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g15389	expressed protein	gene	expressed protein	chr9	9419103	9424292	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os03g21380	OsCML27 - Calmodulin-related calcium sensor protein, expressed	gene	OsCML27 - Calmodulin-related calcium sensor protein, expressed	chr3	12222604	12224818	-	three_prime_UTR,promoter
3	LOC_Os02g48650	acetyltransferase, GNAT family, putative, expressed	gene	acetyltransferase, GNAT family, putative, expressed	chr2	29786994	29789550	+	three_prime_UTR
3	LOC_Os05g40790	CCR4-NOT transcription factor, putative, expressed	gene	CCR4-NOT transcription factor, putative, expressed	chr5	23853793	23860985	+	CDS
3	LOC_Os03g24040	seven in absentia protein family domain containing protein, expressed	gene	seven in absentia protein family domain containing protein, expressed	chr3	13632446	13636208	-	CDS,promoter
3	LOC_Os08g13890	exonuclease, putative, expressed	gene	exonuclease, putative, expressed	chr8	8296238	8298649	+	three_prime_UTR,downstream
3	LOC_Os12g39660	calcium-transporting ATPase, plasma membrane-type, putative, expressed	gene	calcium-transporting ATPase, plasma membrane-type, putative, expressed	chr12	24451731	24457449	+	CDS,three_prime_UTR
3	LOC_Os09g23110	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr9	13665486	13670301	+	CDS,three_prime_UTR
3	LOC_Os12g21754	unknown	gene	unknown	chr12	12237762	12239966	+	CDS,three_prime_UTR
3	LOC_Os12g33194	expressed protein	gene	expressed protein	chr12	20051830	20054979	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g32670	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr2	19369601	19379945	+	CDS
3	LOC_Os02g43110	sodium/calcium exchanger 1 precursor, putative, expressed	gene	sodium/calcium exchanger 1 precursor, putative, expressed	chr2	25951291	25953508	-	CDS,three_prime_UTR
3	LOC_Os11g39140	thioredoxin domain-containing protein 9, putative, expressed	gene	thioredoxin domain-containing protein 9, putative, expressed	chr11	22828982	22832614	+	CDS,promoter
3	LOC_Os02g10380	Regulator of chromosome condensation domain containing protein, expressed	gene	Regulator of chromosome condensation domain containing protein, expressed	chr2	5465521	5468118	-	CDS,promoter
3	LOC_Os03g47550	expressed protein	gene	expressed protein	chr3	26878778	26881348	-	three_prime_UTR,promoter
3	LOC_Os09g02170	unc-50, putative, expressed	gene	unc-50, putative, expressed	chr9	853719	859512	-	CDS,three_prime_UTR
3	LOC_Os08g40140	geranylgeranyl transferase type-2 subunit beta, putative, expressed	gene	geranylgeranyl transferase type-2 subunit beta, putative, expressed	chr8	25398534	25401928	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g01990	expressed protein	gene	expressed protein	chr7	603496	606486	-	CDS,downstream
3	LOC_Os07g46540	condensin complex subunit 1, putative, expressed	gene	condensin complex subunit 1, putative, expressed	chr7	27790113	27798504	-	CDS
3	LOC_Os08g14860	cytochrome b-c1 complex subunit 7, putative, expressed	gene	cytochrome b-c1 complex subunit 7, putative, expressed	chr8	8954266	8958648	+	three_prime_UTR
3	LOC_Os03g08440	ribosomal protein S2, putative, expressed	gene	ribosomal protein S2, putative, expressed	chr3	4335663	4337950	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g27950	RING zinc finger protein, putative, expressed	gene	RING zinc finger protein, putative, expressed	chr7	16302000	16306566	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g33000	E3 ubiquitin-protein ligase MGRN1, putative, expressed	gene	E3 ubiquitin-protein ligase MGRN1, putative, expressed	chr5	19278311	19282850	-	three_prime_UTR,promoter,downstream
3	LOC_Os12g38480	expressed protein	gene	expressed protein	chr12	23583542	23590540	+	three_prime_UTR
3	LOC_Os07g36420	proteasome inhibitor-related, putative, expressed	gene	proteasome inhibitor-related, putative, expressed	chr7	21787582	21792869	-	CDS
3	LOC_Os08g39440	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr8	24935975	24944337	+	CDS,three_prime_UTR
3	LOC_Os02g52940	soluble inorganic pyrophosphatase, putative, expressed	gene	soluble inorganic pyrophosphatase, putative, expressed	chr2	32369001	32372677	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g22660	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	12768140	12769848	-	CDS,promoter
3	LOC_Os03g19890	NADH dehydrogenase 1 alpha subcomplex subunit 5, putative, expressed	gene	NADH dehydrogenase 1 alpha subcomplex subunit 5, putative, expressed	chr3	11179673	11182680	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g39770	calcineurin B, putative, expressed	gene	calcineurin B, putative, expressed	chr1	22426786	22429825	+	three_prime_UTR,CDS
3	LOC_Os02g14530	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr2	8004980	8017343	+	CDS
3	LOC_Os02g42290	OsClp3 - Putative Clp protease homologue, expressed	gene	OsClp3 - Putative Clp protease homologue, expressed	chr2	25425408	25427950	+	three_prime_UTR,downstream
3	LOC_Os09g24520	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr9	14602950	14606124	-	three_prime_UTR,downstream
3	LOC_Os01g54040	ATP-dependent protease La, putative, expressed	gene	ATP-dependent protease La, putative, expressed	chr1	31077565	31086963	-	three_prime_UTR
3	LOC_Os02g32280	expressed protein	gene	expressed protein	chr2	19053005	19057488	+	CDS
3	LOC_Os08g01920	SGR2, putative, expressed	gene	SGR2, putative, expressed	chr8	560001	570313	-	CDS,three_prime_UTR
3	LOC_Os03g37950	proteasome subunit, putative, expressed	gene	proteasome subunit, putative, expressed	chr3	21076831	21079301	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g29870	expressed protein	gene	expressed protein	chr10	15450118	15450603	+	CDS,promoter,downstream
3	LOC_Os11g04290	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr11	1774408	1776731	+	three_prime_UTR,downstream
3	LOC_Os10g37520	major facilitator superfamily domain-containing protein 5, putative, expressed	gene	major facilitator superfamily domain-containing protein 5, putative, expressed	chr10	20020214	20023557	+	CDS,three_prime_UTR
3	LOC_Os02g22650	glycosyltransferase, putative, expressed	gene	glycosyltransferase, putative, expressed	chr2	13495407	13498719	+	three_prime_UTR
3	LOC_Os06g14390	1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed	gene	1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed	chr6	8030720	8034244	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g37100	nucleoside transporter, putative, expressed	gene	nucleoside transporter, putative, expressed	chr7	22230015	22233643	-	CDS
3	LOC_Os08g08230	kinesin-like protein, identical, putative, expressed	gene	kinesin-like protein, identical, putative, expressed	chr8	4708215	4710730	+	three_prime_UTR,promoter,downstream
3	LOC_Os01g14370	histone acetyltransferase HAC5, putative, expressed	gene	histone acetyltransferase HAC5, putative, expressed	chr1	8046368	8054694	-	CDS,three_prime_UTR
3	LOC_Os02g56110	AP-1 complex subunit gamma-1, putative, expressed	gene	AP-1 complex subunit gamma-1, putative, expressed	chr2	34330503	34338160	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g40249	expressed protein	gene	expressed protein	chr11	23535492	23544364	+	CDS,five_prime_UTR,three_prime_UTR
3	LOC_Os04g02830	expressed protein	gene	expressed protein	chr4	1095771	1097846	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g40620	rabGAP/TBC domain-containing protein, putative, expressed	gene	rabGAP/TBC domain-containing protein, putative, expressed	chr8	25710100	25714927	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g32364	Os1bglu1 - beta-mannosidase/glucosidase homologue, expressed	gene	Os1bglu1 - beta-mannosidase/glucosidase homologue, expressed	chr1	17755005	17763974	+	CDS
3	LOC_Os03g63590	metallo-beta-lactamase, putative, expressed	gene	metallo-beta-lactamase, putative, expressed	chr3	35901500	35904563	-	CDS
3	LOC_Os01g67480	helix-loop-helix DNA-binding domain containing protein, expressed	gene	helix-loop-helix DNA-binding domain containing protein, expressed	chr1	39210264	39215594	+	CDS
3	LOC_Os02g47760	AAA-type ATPase family protein, putative, expressed	gene	AAA-type ATPase family protein, putative, expressed	chr2	29193278	29198499	+	CDS,three_prime_UTR
3	LOC_Os06g40740	expressed protein	gene	expressed protein	chr6	24286960	24291743	+	CDS
3	LOC_Os11g03050	cytidylyltransferase domain containing protein, expressed	gene	cytidylyltransferase domain containing protein, expressed	chr11	1070347	1075829	-	CDS,three_prime_UTR
3	LOC_Os07g01560	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr7	347475	352686	-	three_prime_UTR,promoter
3	LOC_Os02g01740	U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed	gene	U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed	chr2	410661	418523	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g54730	expressed protein	gene	expressed protein	chr1	31486070	31489203	-	five_prime_UTR
3	LOC_Os04g37780	histone H3.3a, putative, expressed	gene	histone H3.3a, putative, expressed	chr4	22276163	22278929	+	CDS,three_prime_UTR
3	LOC_Os05g24684	structural constituent of ribosome, putative, expressed	gene	structural constituent of ribosome, putative, expressed	chr5	14237206	14251371	-	CDS,three_prime_UTR
3	LOC_Os03g50540	2Fe-2S iron-sulfur cluster binding domain containing protein, expressed	gene	2Fe-2S iron-sulfur cluster binding domain containing protein, expressed	chr3	28848673	28853189	-	CDS,three_prime_UTR
3	LOC_Os03g13460	microtubule associated protein, putative, expressed	gene	microtubule associated protein, putative, expressed	chr3	7276306	7283308	-	CDS,three_prime_UTR
3	LOC_Os05g28370	expressed protein	gene	expressed protein	chr5	16564554	16568270	-	CDS,three_prime_UTR
3	LOC_Os08g42900	unknown	gene	unknown	chr8	27117924	27118630	-	CDS,promoter,downstream
3	LOC_Os01g12560	3-methyl-2-oxobutanoate hydroxymethyltransferase, putative, expressed	gene	3-methyl-2-oxobutanoate hydroxymethyltransferase, putative, expressed	chr1	6908691	6911131	-	CDS,promoter
3	LOC_Os08g19850	threonyl-tRNA synthetase, mitochondrial precursor, putative, expressed	gene	threonyl-tRNA synthetase, mitochondrial precursor, putative, expressed	chr8	11886893	11896498	-	CDS
3	LOC_Os08g35870	OsFBL48 - F-box domain and LRR containing protein, expressed	gene	OsFBL48 - F-box domain and LRR containing protein, expressed	chr8	22626913	22631149	-	CDS,three_prime_UTR,downstream
3	LOC_Os02g32200	thioesterase family protein, putative, expressed	gene	thioesterase family protein, putative, expressed	chr2	19015748	19018851	+	three_prime_UTR
3	LOC_Os07g38610	UAA transporter family domain containing protein, expressed	gene	UAA transporter family domain containing protein, expressed	chr7	23186299	23191351	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g27010	expressed protein	gene	expressed protein	chr3	15459384	15461759	+	three_prime_UTR,downstream
3	LOC_Os05g38520	60S ribosomal protein L36-2, putative, expressed	gene	60S ribosomal protein L36-2, putative, expressed	chr5	22533860	22535927	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g52710	imidazoleglycerol-phosphate dehydratase, putative, expressed	gene	imidazoleglycerol-phosphate dehydratase, putative, expressed	chr4	31204563	31208893	+	CDS,three_prime_UTR
3	LOC_Os02g46650	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	gene	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	chr2	28466956	28472140	+	CDS,downstream
3	LOC_Os05g33270	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr5	19440408	19444884	+	CDS
3	LOC_Os03g53910	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr3	30896746	30900015	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g44350	conserved uncharacterized protein, putative, expressed	gene	conserved uncharacterized protein, putative, expressed	chr5	25745051	25748373	+	CDS,downstream
3	LOC_Os09g30412	heat shock protein, putative, expressed	gene	heat shock protein, putative, expressed	chr9	18513571	18517315	-	CDS,three_prime_UTR
3	LOC_Os05g24000	expressed protein	gene	expressed protein	chr5	13765744	13771195	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g24690	60S ribosomal protein L34, putative, expressed	gene	60S ribosomal protein L34, putative, expressed	chr9	14690167	14692120	-	three_prime_UTR,downstream
3	LOC_Os05g49770	CTP synthase, putative, expressed	gene	CTP synthase, putative, expressed	chr5	28488665	28494664	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g30170	nitrilase, putative, expressed	gene	nitrilase, putative, expressed	chr7	17819562	17822762	-	CDS
3	LOC_Os02g35730	expressed protein	gene	expressed protein	chr2	21462303	21463014	-	three_prime_UTR,promoter
3	LOC_Os08g40610	30S ribosomal protein S16, putative, expressed	gene	30S ribosomal protein S16, putative, expressed	chr8	25699903	25701649	-	three_prime_UTR,promoter
3	LOC_Os09g39660	ZOS9-21 - C2H2 zinc finger protein, expressed	gene	ZOS9-21 - C2H2 zinc finger protein, expressed	chr9	22758450	22762056	+	CDS,three_prime_UTR
3	LOC_Os06g06410	rRNA-processing protein FCF, putative, expressed	gene	rRNA-processing protein FCF, putative, expressed	chr6	2991046	2994595	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g72340	beta-galactosidase, putative, expressed	gene	beta-galactosidase, putative, expressed	chr1	41953590	41961744	+	CDS
3	LOC_Os01g12200	expressed protein	gene	expressed protein	chr1	6652077	6654383	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g07870	DEAD/DEAH box helicase domain containing protein, expressed	gene	DEAD/DEAH box helicase domain containing protein, expressed	chr11	4017600	4029946	+	CDS
3	LOC_Os08g39600	RNA methyltransferase, TrmH family protein, putative, expressed	gene	RNA methyltransferase, TrmH family protein, putative, expressed	chr8	25061926	25064139	-	CDS,promoter
3	LOC_Os08g42320	expressed protein	gene	expressed protein	chr8	26710560	26713725	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g40110	ZOS1-11 - C2H2 zinc finger protein, expressed	gene	ZOS1-11 - C2H2 zinc finger protein, expressed	chr1	22624161	22627013	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g37280	diacylglycerol kinase, putative, expressed	gene	diacylglycerol kinase, putative, expressed	chr10	19891242	19899914	+	CDS
3	LOC_Os04g54370	expressed protein	gene	expressed protein	chr4	32171048	32173647	-	five_prime_UTR,CDS,downstream
3	LOC_Os05g26040	pumilio-family RNA binding repeat containing protein, expressed	gene	pumilio-family RNA binding repeat containing protein, expressed	chr5	15078830	15090045	+	CDS,three_prime_UTR
3	LOC_Os01g16220	Sad1 / UNC-like C-terminal domain containing protein, putative, expressed	gene	Sad1 / UNC-like C-terminal domain containing protein, putative, expressed	chr1	9178212	9180984	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g26340	CGMC_MAPKCMGC_2.10 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	gene	CGMC_MAPKCMGC_2.10 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	chr6	15413830	15422650	-	CDS
3	LOC_Os06g43710	glucosidase II beta subunit-like domain containing protein, expressed	gene	glucosidase II beta subunit-like domain containing protein, expressed	chr6	26315045	26317959	-	CDS,three_prime_UTR
3	LOC_Os12g30540	ubiquitin carboxyl-terminal hydrolase, putative, expressed	gene	ubiquitin carboxyl-terminal hydrolase, putative, expressed	chr12	18306101	18320796	+	three_prime_UTR
3	LOC_Os05g13780	C-5 cytosine-specific DNA methylase, putative, expressed	gene	C-5 cytosine-specific DNA methylase, putative, expressed	chr5	7634632	7648312	-	CDS,promoter
3	LOC_Os02g10060	SWIRM domain containing protein, expressed	gene	SWIRM domain containing protein, expressed	chr2	5238179	5242113	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g38820	histone-like transcription factor and archaeal histone, putative, expressed	gene	histone-like transcription factor and archaeal histone, putative, expressed	chr5	22707536	22711525	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g49940	expressed protein	gene	expressed protein	chr4	29602699	29604493	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g24170	hypothetical protein	gene	hypothetical protein	chr9	14351511	14354261	-	CDS,downstream
3	LOC_Os04g31050	expressed protein	gene	expressed protein	chr4	18382505	18387376	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g05800	OsFBL21 - F-box domain and LRR containing protein, expressed	gene	OsFBL21 - F-box domain and LRR containing protein, expressed	chr5	2892472	2899089	-	CDS
3	LOC_Os04g56510	ABC1 family domain containing protein, putative, expressed	gene	ABC1 family domain containing protein, putative, expressed	chr4	33512605	33518496	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g21000	nucleoside-triphosphatase, putative, expressed	gene	nucleoside-triphosphatase, putative, expressed	chr10	10566190	10570813	-	CDS,three_prime_UTR
3	LOC_Os04g53994	kinase, putative, expressed	gene	kinase, putative, expressed	chr4	31988447	31992258	-	CDS,three_prime_UTR,downstream
3	LOC_Os06g10200	adenylate kinase, putative, expressed	gene	adenylate kinase, putative, expressed	chr6	5220420	5224271	+	three_prime_UTR,CDS,downstream
3	LOC_Os12g32544	expressed protein	gene	expressed protein	chr12	19614036	19621697	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g56620	pseudouridylate synthase, putative, expressed	gene	pseudouridylate synthase, putative, expressed	chr1	32659656	32666381	-	CDS,three_prime_UTR
3	LOC_Os09g29940	auxin-independent growth promoter protein, putative, expressed	gene	auxin-independent growth promoter protein, putative, expressed	chr9	18216456	18220155	-	CDS,three_prime_UTR
3	LOC_Os01g64630	actin, putative, expressed	gene	actin, putative, expressed	chr1	37508842	37512326	+	CDS,three_prime_UTR
3	LOC_Os03g18710	expressed protein	gene	expressed protein	chr3	10469588	10475964	-	CDS,promoter,downstream
3	LOC_Os02g44270	expressed protein	gene	expressed protein	chr2	26778665	26782149	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os07g31390	beta-expansin precursor, putative, expressed	gene	beta-expansin precursor, putative, expressed	chr7	18597164	18598613	+	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g08590	hypothetical protein	gene	hypothetical protein	chr3	4418075	4418384	-	CDS,promoter
3	LOC_Os07g28470	coiled-coil domain-containing protein 111, putative, expressed	gene	coiled-coil domain-containing protein 111, putative, expressed	chr7	16659294	16668991	+	CDS
3	LOC_Os03g56630	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr3	32243504	32248025	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g13230	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr3	7135649	7137898	+	CDS,promoter,downstream
3	LOC_Os05g32610	required to maintain repression 1, putative, expressed	gene	required to maintain repression 1, putative, expressed	chr5	19030997	19036701	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g16070	expressed protein	gene	expressed protein	chr3	8853401	8858477	-	CDS
3	LOC_Os08g43910	conserved hypothetical protein	gene	conserved hypothetical protein	chr8	27674928	27675536	+	CDS,promoter,downstream
3	LOC_Os08g02990	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr8	1299232	1307737	-	CDS
3	LOC_Os02g09170	sucrose-phosphate synthase, putative, expressed	gene	sucrose-phosphate synthase, putative, expressed	chr2	4708490	4716877	+	CDS
3	LOC_Os03g58880	oxidoreductase, putative, expressed	gene	oxidoreductase, putative, expressed	chr3	33512720	33515111	-	CDS,downstream
3	LOC_Os09g09490	disease resistance protein RPM1, putative, expressed	gene	disease resistance protein RPM1, putative, expressed	chr9	5107210	5111958	+	CDS,promoter
3	LOC_Os11g16420	protein of unknown function containing protein, expressed	gene	protein of unknown function containing protein, expressed	chr11	9073789	9080017	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g07800	thiol-disulphide oxidoreductase DCC, putative, expressed	gene	thiol-disulphide oxidoreductase DCC, putative, expressed	chr1	3736903	3741067	-	three_prime_UTR,promoter,downstream
3	LOC_Os11g03470	bifunctional aspartokinase/homoserine dehydrogenase, putative, expressed	gene	bifunctional aspartokinase/homoserine dehydrogenase, putative, expressed	chr11	1328411	1332416	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g01810	SNF7 domain containing protein, putative, expressed	gene	SNF7 domain containing protein, putative, expressed	chr3	496749	498660	+	three_prime_UTR,downstream
3	LOC_Os10g22510	MLA1, putative, expressed	gene	MLA1, putative, expressed	chr10	11591415	11595422	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g55030	hydrolase, NUDIX family, domain containing protein, expressed	gene	hydrolase, NUDIX family, domain containing protein, expressed	chr2	33704084	33713617	+	CDS,promoter
3	LOC_Os09g30330	phosphatidylinositol transfer, putative	gene	phosphatidylinositol transfer, putative	chr9	18463851	18467651	+	CDS
3	LOC_Os06g44810	expressed protein	gene	expressed protein	chr6	27067988	27073409	+	CDS
3	LOC_Os09g13880	SWIM zinc finger family protein, putative, expressed	gene	SWIM zinc finger family protein, putative, expressed	chr9	8164969	8168058	-	CDS,three_prime_UTR
3	LOC_Os08g30810	puromycin-sensitive aminopeptidase, putative, expressed	gene	puromycin-sensitive aminopeptidase, putative, expressed	chr8	19019102	19029143	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g39650	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr11	23148907	23153185	-	CDS,three_prime_UTR
3	LOC_Os12g41620	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr12	25718496	25724633	+	CDS,three_prime_UTR
3	LOC_Os05g41810	OsDegp8 - Putative Deg protease homologue, expressed	gene	OsDegp8 - Putative Deg protease homologue, expressed	chr5	24421091	24426511	-	CDS,promoter
3	LOC_Os08g04140	X8 domain containing protein, expressed	gene	X8 domain containing protein, expressed	chr8	2011003	2012410	+	CDS,three_prime_UTR
3	LOC_Os11g10640	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr11	5830981	5837312	-	CDS,three_prime_UTR
3	LOC_Os04g08330	hypothetical protein	gene	hypothetical protein	chr4	4442253	4442564	-	CDS,promoter,downstream
3	LOC_Os10g22310	glutathione S-transferase GST 26, putative, expressed	gene	glutathione S-transferase GST 26, putative, expressed	chr10	11466456	11471548	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g44380	WD domain containing protein, putative, expressed	gene	WD domain containing protein, putative, expressed	chr2	26861140	26874624	-	CDS
3	LOC_Os08g09300	expressed protein	gene	expressed protein	chr8	5394456	5397854	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g11790	TLD family protein, putative, expressed	gene	TLD family protein, putative, expressed	chr6	6242661	6246720	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g05694	hypothetical protein	gene	hypothetical protein	chr1	2718212	2719873	+	CDS,promoter,downstream
3	LOC_Os08g32930	expressed protein	gene	expressed protein	chr8	20421021	20425078	+	CDS,three_prime_UTR
3	LOC_Os07g09580	aminoacyl-tRNA synthetase, putative, expressed	gene	aminoacyl-tRNA synthetase, putative, expressed	chr7	5070072	5076622	-	three_prime_UTR,CDS,promoter
3	LOC_Os01g43030	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr1	24533783	24545651	-	CDS,three_prime_UTR
3	LOC_Os11g07916	nifU, putative, expressed	gene	nifU, putative, expressed	chr11	4087072	4089571	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g09460	GA16396-PA, putative, expressed	gene	GA16396-PA, putative, expressed	chr2	4855905	4859070	-	CDS
3	LOC_Os03g61120	anthranilate synthase component I-1, chloroplast precursor, putative, expressed	gene	anthranilate synthase component I-1, chloroplast precursor, putative, expressed	chr3	34708266	34713945	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g50680	AAA-type ATPase family protein, putative, expressed	gene	AAA-type ATPase family protein, putative, expressed	chr2	30952740	30959409	-	CDS,three_prime_UTR
3	LOC_Os05g31490	golgi transport complex protein-related, putative, expressed	gene	golgi transport complex protein-related, putative, expressed	chr5	18258676	18263462	-	CDS
3	LOC_Os02g54110	expressed protein	gene	expressed protein	chr2	33141034	33148238	+	CDS
3	LOC_Os02g07720	cytidylyltransferase domain containing protein, expressed	gene	cytidylyltransferase domain containing protein, expressed	chr2	4024677	4028686	+	CDS,three_prime_UTR
3	LOC_Os07g48880	importin subunit alpha-1b, putative, expressed	gene	importin subunit alpha-1b, putative, expressed	chr7	29246392	29250978	-	CDS,three_prime_UTR
3	LOC_Os09g04450	hypothetical protein	gene	hypothetical protein	chr9	2362830	2368344	+	CDS
3	LOC_Os11g37390	OsFBDUF54 - F-box and DUF domain containing protein, expressed	gene	OsFBDUF54 - F-box and DUF domain containing protein, expressed	chr11	21601975	21604280	+	CDS
3	LOC_Os04g26850	SAD2, putative, expressed	gene	SAD2, putative, expressed	chr4	15702169	15708259	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g42196	expressed protein	gene	expressed protein	chr10	22627595	22635584	-	three_prime_UTR,promoter
3	LOC_Os03g24520	Mo25, putative, expressed	gene	Mo25, putative, expressed	chr3	13973719	13980252	+	CDS,five_prime_UTR
3	LOC_Os12g42640	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr12	26467261	26470961	-	CDS
3	LOC_Os01g59850	GTPase-activating protein, putative, expressed	gene	GTPase-activating protein, putative, expressed	chr1	34611544	34617962	+	CDS,three_prime_UTR
3	LOC_Os03g18454	gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed	gene	gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed	chr3	10353539	10358265	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g55600	CAMK_CAMK_like.22 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.22 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr3	31645571	31651130	+	CDS,three_prime_UTR
3	LOC_Os07g40450	expressed protein	gene	expressed protein	chr7	24239470	24242375	-	CDS,three_prime_UTR
3	LOC_Os11g48070	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr11	28459723	28462542	+	CDS,three_prime_UTR
3	LOC_Os02g02800	AGAP001222-PA, putative, expressed	gene	AGAP001222-PA, putative, expressed	chr2	1067025	1069448	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g34010	expressed protein	gene	expressed protein	chr9	20077693	20082156	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g15820	NHL repeat-containing protein, putative, expressed	gene	NHL repeat-containing protein, putative, expressed	chr6	8976313	8980634	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g42610	plant protein of unknown function DUF869 domain containing protein, expressed	gene	plant protein of unknown function DUF869 domain containing protein, expressed	chr4	25022670	25028779	+	CDS,three_prime_UTR
3	LOC_Os02g58730	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr2	35874978	35879805	+	CDS,three_prime_UTR
3	LOC_Os12g13950	POLA2 - Putative DNA polymerase alpha complex subunit, expressed	gene	POLA2 - Putative DNA polymerase alpha complex subunit, expressed	chr12	7919041	7924125	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g32110	COBRA, putative, expressed	gene	COBRA, putative, expressed	chr5	18658745	18662388	-	CDS,three_prime_UTR
3	LOC_Os12g03822	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr12	1561101	1565512	-	CDS,three_prime_UTR,five_prime_UTR
3	LOC_Os10g41350	transposon protein, putative, Pong sub-class, expressed	gene	transposon protein, putative, Pong sub-class, expressed	chr10	22153146	22156113	+	CDS,downstream
3	LOC_Os06g48040	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr6	29058689	29062782	-	CDS,three_prime_UTR
3	LOC_Os06g04260	expressed protein	gene	expressed protein	chr6	1804377	1806616	+	CDS,downstream
3	LOC_Os03g06139	ABC-2 type transporter domain containing protein, expressed	gene	ABC-2 type transporter domain containing protein, expressed	chr3	3074915	3084985	-	CDS
3	LOC_Os07g38150	expressed protein	gene	expressed protein	chr7	22879423	22881072	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g43420	LZ-NBS-LRR class RGA, putative, expressed	gene	LZ-NBS-LRR class RGA, putative, expressed	chr11	25745838	25749167	+	CDS
3	LOC_Os01g17000	expressed protein	gene	expressed protein	chr1	9732808	9737202	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g27530	FHA domain containing protein, putative, expressed	gene	FHA domain containing protein, putative, expressed	chr11	15376288	15380711	+	CDS,downstream
3	LOC_Os08g06930	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr8	3858645	3862150	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g33180	rar1, putative, expressed	gene	rar1, putative, expressed	chr2	19721250	19724020	-	CDS,three_prime_UTR
3	LOC_Os08g41110	chaperone protein dnaJ 10, putative, expressed	gene	chaperone protein dnaJ 10, putative, expressed	chr8	25976757	25981303	+	CDS,three_prime_UTR
3	LOC_Os03g59740	ADP-ribosylation factor, putative, expressed	gene	ADP-ribosylation factor, putative, expressed	chr3	33999767	34002716	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g08340	OsSigP3 - Putative Type I Signal Peptidase homologue; employs a putative Ser/Lys catalytic dyad, expressed	gene	OsSigP3 - Putative Type I Signal Peptidase homologue; employs a putative Ser/Lys catalytic dyad, expressed	chr4	4448300	4450954	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g49130	16S rRNA processing protein RimM containing protein, expressed	gene	16S rRNA processing protein RimM containing protein, expressed	chr5	28120482	28126052	+	three_prime_UTR,promoter,downstream
3	LOC_Os02g52340	OsMADS22 - MADS-box family gene with MIKCc type-box, expressed	gene	OsMADS22 - MADS-box family gene with MIKCc type-box, expressed	chr2	32033033	32039261	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g14020	expressed protein	gene	expressed protein	chr1	7851645	7854833	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g05860	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr1	2804584	2807152	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g33690	sec23/Sec24 trunk domain containing protein, expressed	gene	sec23/Sec24 trunk domain containing protein, expressed	chr4	20226137	20233854	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g16040	erythronate-4-phosphate dehydrogenase domain containing protein, expressed	gene	erythronate-4-phosphate dehydrogenase domain containing protein, expressed	chr7	9352047	9356795	+	CDS
3	LOC_Os05g42300	NAF1 domain containing protein, expressed	gene	NAF1 domain containing protein, expressed	chr5	24675996	24679972	-	CDS
3	LOC_Os12g06980	SAP domain containing protein, expressed	gene	SAP domain containing protein, expressed	chr12	3401730	3412835	-	CDS
3	LOC_Os04g35530	expressed protein	gene	expressed protein	chr4	21457616	21460890	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g35465	expressed protein	gene	expressed protein	chr12	21534920	21537736	+	CDS,three_prime_UTR
3	LOC_Os02g49240	expressed protein	gene	expressed protein	chr2	30092580	30094311	-	three_prime_UTR,promoter
3	LOC_Os05g45770	Divergent PAP2 family domain containing protein, expressed	gene	Divergent PAP2 family domain containing protein, expressed	chr5	26444970	26447439	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g01420	ribosomal protein L10, putative, expressed	gene	ribosomal protein L10, putative, expressed	chr11	251428	253921	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g19470	 proteins of unknown function domain containing protein, expressed	gene	 proteins of unknown function domain containing protein, expressed	chr3	10948156	10950550	+	CDS,downstream
3	LOC_Os11g17290	expressed protein	gene	expressed protein	chr11	9621781	9628343	+	CDS,three_prime_UTR
3	LOC_Os02g49992	expressed protein	gene	expressed protein	chr2	30536300	30547711	-	CDS,three_prime_UTR
3	LOC_Os07g13280	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr7	7626427	7634110	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g48190	expressed protein	gene	expressed protein	chr2	29496781	29500832	-	CDS,three_prime_UTR
3	LOC_Os06g45330	endonuclease V, putative, expressed	gene	endonuclease V, putative, expressed	chr6	27396477	27399413	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g03690	glycosylphosphatidylinositol anchor biosynthesis protein 11, putative, expressed	gene	glycosylphosphatidylinositol anchor biosynthesis protein 11, putative, expressed	chr3	1640565	1645412	+	CDS,three_prime_UTR
3	LOC_Os04g46892	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr4	27609998	27613623	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g13170	ubiquitin fusion protein, putative, expressed	gene	ubiquitin fusion protein, putative, expressed	chr3	7100979	7103764	-	CDS
3	LOC_Os01g72310	OsFBO7 - F-box and other domain containing protein, expressed	gene	OsFBO7 - F-box and other domain containing protein, expressed	chr1	41918587	41924259	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g33580	digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed	gene	digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed	chr2	19967319	19971585	+	CDS
3	LOC_Os03g05780	4-coumarate--CoA ligase-like 7, putative, expressed	gene	4-coumarate--CoA ligase-like 7, putative, expressed	chr3	2882001	2886918	-	CDS
3	LOC_Os05g08840	DnaK family protein, putative, expressed	gene	DnaK family protein, putative, expressed	chr5	4877600	4883578	+	CDS
3	LOC_Os10g08930	S10/S20 domain containing ribosomal protein, putative, expressed	gene	S10/S20 domain containing ribosomal protein, putative, expressed	chr10	4848591	4851673	+	CDS,three_prime_UTR
3	LOC_Os10g41020	flavonol synthase/flavanone 3-hydroxylase, putative, expressed	gene	flavonol synthase/flavanone 3-hydroxylase, putative, expressed	chr10	21948190	21951869	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g64090	L1P family of ribosomal proteins domain containing protein, expressed	gene	L1P family of ribosomal proteins domain containing protein, expressed	chr1	37230464	37233609	+	CDS
3	LOC_Os11g34770	maf, putative, expressed	gene	maf, putative, expressed	chr11	19906667	19910057	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g23630	transcription initiation factor IID, 18kD subunit family protein, expressed	gene	transcription initiation factor IID, 18kD subunit family protein, expressed	chr1	13290312	13293441	+	CDS,downstream
3	LOC_Os07g29820	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr7	17528559	17534093	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g35290	DNA-directed RNA polymerase I subunit RPA2, putative, expressed	gene	DNA-directed RNA polymerase I subunit RPA2, putative, expressed	chr10	18786342	18796209	-	CDS
3	LOC_Os08g23290	serine/threonine-protein kinase BRI1-like 2 precursor, putative	gene	serine/threonine-protein kinase BRI1-like 2 precursor, putative	chr8	14053356	14055697	+	CDS,downstream
3	LOC_Os06g50742	expressed protein	gene	expressed protein	chr6	30696867	30699405	+	CDS,three_prime_UTR
3	LOC_Os05g32230	expressed protein	gene	expressed protein	chr5	18733911	18739611	+	CDS,three_prime_UTR
3	LOC_Os01g63420	OsFBL4 - F-box domain and LRR containing protein, expressed	gene	OsFBL4 - F-box domain and LRR containing protein, expressed	chr1	36745764	36749933	+	CDS,three_prime_UTR
3	LOC_Os07g19030	tic22-like family domain containing protein, expressed	gene	tic22-like family domain containing protein, expressed	chr7	11267900	11272498	+	three_prime_UTR,downstream
3	LOC_Os03g40670	glycerophosphoryl diester phosphodiesterase family protein, putative, expressed	gene	glycerophosphoryl diester phosphodiesterase family protein, putative, expressed	chr3	22614375	22618042	+	CDS
3	LOC_Os12g08830	thylakoid lumenal 29.8 kDa protein, putative, expressed	gene	thylakoid lumenal 29.8 kDa protein, putative, expressed	chr12	4554843	4557031	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g42189	expressed protein	gene	expressed protein	chr8	26649400	26653074	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os03g25960	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr3	14865300	14867415	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g33930	Divergent PAP2 family domain containing protein, expressed	gene	Divergent PAP2 family domain containing protein, expressed	chr6	19735506	19739941	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g41612	ribosomal protein L25, putative, expressed	gene	ribosomal protein L25, putative, expressed	chr3	23133961	23138718	-	three_prime_UTR,CDS
3	LOC_Os05g11730	CGMC_GSK.7 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	gene	CGMC_GSK.7 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	chr5	6657422	6661434	-	CDS,three_prime_UTR
3	LOC_Os04g51270	vacuolar ATPase G subunit, putative, expressed	gene	vacuolar ATPase G subunit, putative, expressed	chr4	30189558	30191962	-	CDS,three_prime_UTR
3	LOC_Os03g13220	expressed protein	gene	expressed protein	chr3	7131563	7135036	+	CDS,three_prime_UTR
3	LOC_Os07g38600	REX1 DNA Repair family protein, expressed	gene	REX1 DNA Repair family protein, expressed	chr7	23184312	23185947	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g10830	dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDasubunit precursor, putative, expressed	gene	dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDasubunit precursor, putative, expressed	chr7	5884347	5889090	+	CDS,three_prime_UTR,promoter
3	LOC_Os02g07120	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr2	3659090	3669320	-	CDS
3	LOC_Os02g14730	ubiquitin carboxyl-terminal hydrolase family protein, expressed	gene	ubiquitin carboxyl-terminal hydrolase family protein, expressed	chr2	8135360	8143468	+	CDS
3	LOC_Os03g08070	copper-transporting ATPase PAA1, putative, expressed	gene	copper-transporting ATPase PAA1, putative, expressed	chr3	4118947	4126086	-	CDS,three_prime_UTR
3	LOC_Os02g39140	helix-loop-helix DNA-binding domain containing protein, expressed	gene	helix-loop-helix DNA-binding domain containing protein, expressed	chr2	23637223	23645665	+	CDS,three_prime_UTR
3	LOC_Os03g56540	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr3	32201757	32203731	+	CDS,five_prime_UTR
3	LOC_Os08g04180	tryptophan synthase beta chain 1, putative, expressed	gene	tryptophan synthase beta chain 1, putative, expressed	chr8	2028735	2032183	+	CDS,three_prime_UTR
3	LOC_Os06g01690	septum site-determining protein minD, putative, expressed	gene	septum site-determining protein minD, putative, expressed	chr6	409926	412145	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os10g08474	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr10	4616476	4619448	+	CDS
3	LOC_Os07g45120	expressed protein	gene	expressed protein	chr7	26933317	26936423	+	three_prime_UTR,downstream
3	LOC_Os02g46130	tRNA synthetases class II domain containing protein, expressed	gene	tRNA synthetases class II domain containing protein, expressed	chr2	28107735	28113122	+	CDS,three_prime_UTR
3	LOC_Os01g38970	carbamoyl-phosphate synthase large chain, putative, expressed	gene	carbamoyl-phosphate synthase large chain, putative, expressed	chr1	21891743	21896902	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g17110	expressed protein	gene	expressed protein	chr8	10466482	10472169	-	CDS
3	LOC_Os03g24339	PWWP domain containing protein, expressed	gene	PWWP domain containing protein, expressed	chr3	13839847	13859606	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g35070	expressed protein	gene	expressed protein	chr4	21147671	21148692	+	three_prime_UTR,promoter,downstream
3	LOC_Os08g41250	signal recognition particle receptor subunit beta, putative, expressed	gene	signal recognition particle receptor subunit beta, putative, expressed	chr8	26043967	26046968	-	CDS
3	LOC_Os08g37874	2-nitropropane dioxygenase family, putative, expressed	gene	2-nitropropane dioxygenase family, putative, expressed	chr8	23985256	23993747	+	three_prime_UTR,CDS
3	LOC_Os03g29240	PDI, putative, expressed	gene	PDI, putative, expressed	chr3	16627191	16630722	+	CDS
3	LOC_Os06g45380	vacuolar-sorting receptor precursor, putative, expressed	gene	vacuolar-sorting receptor precursor, putative, expressed	chr6	27432321	27440151	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g29300	expressed protein	gene	expressed protein	chr2	17400342	17405254	-	CDS,three_prime_UTR
3	LOC_Os08g37790	phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplast precursor, putative, expressed	gene	phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplast precursor, putative, expressed	chr8	23932142	23936174	-	CDS
3	LOC_Os06g07210	ribonucleoside-diphosphate reductase large subunit, putative, expressed	gene	ribonucleoside-diphosphate reductase large subunit, putative, expressed	chr6	3448668	3453769	-	CDS
3	LOC_Os03g53150	OsIAA13 - Auxin-responsive Aux/IAA gene family member, expressed	gene	OsIAA13 - Auxin-responsive Aux/IAA gene family member, expressed	chr3	30473549	30476220	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g31520	ribosomal RNA assembly protein mis3, putative, expressed	gene	ribosomal RNA assembly protein mis3, putative, expressed	chr10	16437854	16441632	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g01590	arginase, putative, expressed	gene	arginase, putative, expressed	chr4	395479	399945	+	CDS,downstream
3	LOC_Os04g52074	expressed protein	gene	expressed protein	chr4	30742510	30748980	+	CDS,three_prime_UTR
3	LOC_Os12g01010	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr12	1682	4428	+	CDS,promoter
3	LOC_Os06g51100	transmembrane protein, putative, expressed	gene	transmembrane protein, putative, expressed	chr6	30906002	30912488	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g30944	expressed protein	gene	expressed protein	chr10	16068672	16078737	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g05100	nucleolar GTPase, putative, expressed	gene	nucleolar GTPase, putative, expressed	chr11	2230436	2234960	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g09650	ubiquinone biosynthesis protein COQ4, putative, expressed	gene	ubiquinone biosynthesis protein COQ4, putative, expressed	chr5	5450082	5451951	+	CDS,downstream
3	LOC_Os04g25784	expressed protein	gene	expressed protein	chr4	14947081	14949419	+	three_prime_UTR,downstream
3	LOC_Os08g33680	YGL010w, putative, expressed	gene	YGL010w, putative, expressed	chr8	21031465	21033381	-	three_prime_UTR,promoter
3	LOC_Os04g55050	amidase, putative, expressed	gene	amidase, putative, expressed	chr4	32551445	32554752	-	three_prime_UTR,CDS,promoter
3	LOC_Os12g16490	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr12	9436208	9441368	+	CDS,promoter
3	LOC_Os05g48790	expressed protein	gene	expressed protein	chr5	27895161	27901461	-	CDS,three_prime_UTR
3	LOC_Os06g08670	glutathione peroxidase, putative, expressed	gene	glutathione peroxidase, putative, expressed	chr6	4320608	4324284	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g43570	UBX domain-containing protein 1, putative, expressed	gene	UBX domain-containing protein 1, putative, expressed	chr3	24339310	24342864	+	CDS,three_prime_UTR
3	LOC_Os08g08110	diacylglycerol kinase, putative, expressed	gene	diacylglycerol kinase, putative, expressed	chr8	4598740	4603717	-	CDS,three_prime_UTR
3	LOC_Os05g25890	expressed protein	gene	expressed protein	chr5	15004027	15008798	+	five_prime_UTR,CDS
3	LOC_Os01g43540	suppressor of G2 allele of SKP1, putative, expressed	gene	suppressor of G2 allele of SKP1, putative, expressed	chr1	24936621	24941861	+	CDS
3	LOC_Os05g19280	expressed protein	gene	expressed protein	chr5	11200320	11206254	+	CDS
3	LOC_Os11g36030	protein binding protein, putative, expressed	gene	protein binding protein, putative, expressed	chr11	20712092	20716162	-	CDS
3	LOC_Os03g05110	xyloglucan galactosyltransferase KATAMARI1, putative, expressed	gene	xyloglucan galactosyltransferase KATAMARI1, putative, expressed	chr3	2485916	2488496	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g56620	expressed protein	gene	expressed protein	chr3	32241787	32244495	+	CDS,downstream
3	LOC_Os03g18190	importin subunit beta, putative	gene	importin subunit beta, putative	chr3	10191032	10201057	-	CDS
3	LOC_Os04g58380	expressed protein	gene	expressed protein	chr4	34548487	34550984	-	CDS,three_prime_UTR
3	LOC_Os06g22670	tesmin/TSO1-like CXC domain containing protein, expressed	gene	tesmin/TSO1-like CXC domain containing protein, expressed	chr6	13181292	13188127	-	CDS,promoter
3	LOC_Os10g30054	ENT domain containing protein, expressed	gene	ENT domain containing protein, expressed	chr10	15529837	15539364	+	five_prime_UTR,CDS
3	LOC_Os11g44310	calmodulin binding protein, putative, expressed	gene	calmodulin binding protein, putative, expressed	chr11	26306199	26312360	+	CDS
3	LOC_Os05g34650	DUF647 domain containing protein, putative, expressed	gene	DUF647 domain containing protein, putative, expressed	chr5	20485804	20490625	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g64990	GPI transamidase subunit PIG-U domain containing protein, expressed	gene	GPI transamidase subunit PIG-U domain containing protein, expressed	chr1	37721267	37730862	+	CDS,downstream
3	LOC_Os07g01710	phytosulfokine receptor precursor, putative, expressed	gene	phytosulfokine receptor precursor, putative, expressed	chr7	423870	427523	+	CDS,three_prime_UTR
3	LOC_Os06g50050	AAA-type ATPase family protein, putative	gene	AAA-type ATPase family protein, putative	chr6	30331388	30335427	+	CDS,three_prime_UTR
3	LOC_Os07g46080	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	27500843	27506161	+	CDS,downstream
3	LOC_Os12g41190	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr12	25494698	25499127	-	CDS,three_prime_UTR
3	LOC_Os09g24460	expressed protein	gene	expressed protein	chr9	14554402	14557305	+	five_prime_UTR,promoter
3	LOC_Os04g39900	Os4bglu13 - beta-glucosidase homologue, similar to Os4Bglu12 exoglucanase/b-glucosidase, expressed	gene	Os4bglu13 - beta-glucosidase homologue, similar to Os4Bglu12 exoglucanase/b-glucosidase, expressed	chr4	23577179	23583102	-	CDS,downstream
3	LOC_Os12g01290	ulp1 protease family protein, putative, expressed	gene	ulp1 protease family protein, putative, expressed	chr12	164073	168377	+	CDS
3	LOC_Os11g06340	ubiquinol-cytochrome C reductase hinge protein, putative, expressed	gene	ubiquinol-cytochrome C reductase hinge protein, putative, expressed	chr11	3033366	3035929	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g57480	serine/threonine-protein kinase receptor precursor, putative, expressed	gene	serine/threonine-protein kinase receptor precursor, putative, expressed	chr1	33209186	33215289	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g44540	expressed protein	gene	expressed protein	chr2	26976336	26981015	-	CDS,three_prime_UTR
3	LOC_Os10g24940	expressed protein	gene	expressed protein	chr10	12763138	12772571	+	CDS,three_prime_UTR
3	LOC_Os07g42260	peptidase, T1 family, putative, expressed	gene	peptidase, T1 family, putative, expressed	chr7	25288262	25292799	-	CDS,three_prime_UTR
3	LOC_Os03g11050	mannose-1-phosphate guanyltransferase, putative, expressed	gene	mannose-1-phosphate guanyltransferase, putative, expressed	chr3	5679647	5684409	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g34740	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr10	18476747	18481407	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g10340	autophagy-related protein 12, putative, expressed	gene	autophagy-related protein 12, putative, expressed	chr6	5307993	5309603	+	CDS,downstream
3	LOC_Os01g47190	phosphoglycerate mutase, putative, expressed	gene	phosphoglycerate mutase, putative, expressed	chr1	26970596	26972587	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g43130	transcriptional corepressor LEUNIG, putative, expressed	gene	transcriptional corepressor LEUNIG, putative, expressed	chr4	25341535	25349823	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g37740	CGMC_GSK.9 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	gene	CGMC_GSK.9 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	chr10	20125063	20129814	-	CDS,three_prime_UTR
3	LOC_Os07g44970	XPA-binding protein 2, putative, expressed	gene	XPA-binding protein 2, putative, expressed	chr7	26818298	26823312	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g28940	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	gene	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	chr9	17599529	17607512	-	CDS
3	LOC_Os03g53670	YT521-B-like family domain containing protein, expressed	gene	YT521-B-like family domain containing protein, expressed	chr3	30770607	30774719	+	CDS
3	LOC_Os02g54860	ankyrin repeat-rich protein, putative, expressed	gene	ankyrin repeat-rich protein, putative, expressed	chr2	33589859	33593590	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g45930	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr4	27015132	27021843	+	three_prime_UTR
3	LOC_Os09g15430	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr9	9443997	9448780	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g30220	disease resistance RPP13-like protein 1, putative, expressed	gene	disease resistance RPP13-like protein 1, putative, expressed	chr5	17452403	17457576	-	three_prime_UTR,promoter
3	LOC_Os03g64190	la domain containing protein, putative, expressed	gene	la domain containing protein, putative, expressed	chr3	36258385	36264359	-	CDS,three_prime_UTR
3	LOC_Os04g58780	pentatricopeptide repeat protein, putative, expressed	gene	pentatricopeptide repeat protein, putative, expressed	chr4	34773502	34785001	+	three_prime_UTR
3	LOC_Os10g08940	expressed protein	gene	expressed protein	chr10	4852422	4858815	+	CDS,three_prime_UTR,promoter
3	LOC_Os07g30220	expressed protein	gene	expressed protein	chr7	17850175	17853477	-	CDS,three_prime_UTR
3	LOC_Os01g14580	dehydrogenase, putative, expressed	gene	dehydrogenase, putative, expressed	chr1	8169309	8175392	+	CDS,three_prime_UTR
3	LOC_Os01g01080	decarboxylase, putative, expressed	gene	decarboxylase, putative, expressed	chr1	34581	40180	+	CDS,promoter
3	LOC_Os07g01240	expressed protein	gene	expressed protein	chr7	133162	142578	-	CDS,three_prime_UTR
3	LOC_Os02g03970	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr2	1708915	1716927	-	CDS,three_prime_UTR
3	LOC_Os10g36960	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr10	19732980	19734581	+	CDS,promoter
3	LOC_Os01g17180	proteasome subunit, putative, expressed	gene	proteasome subunit, putative, expressed	chr1	9877330	9884537	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g05870	expressed protein	gene	expressed protein	chr7	2818027	2821946	-	CDS,three_prime_UTR
3	LOC_Os02g51350	OsFBK10 - F-box domain and kelch repeat containing protein, expressed	gene	OsFBK10 - F-box domain and kelch repeat containing protein, expressed	chr2	31438685	31441856	-	CDS,three_prime_UTR
3	LOC_Os01g56790	expressed protein	gene	expressed protein	chr1	32767553	32772237	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g35948	expressed protein	gene	expressed protein	chr8	22667845	22672874	-	CDS,downstream
3	LOC_Os04g45800	diacylglycerol kinase, putative, expressed	gene	diacylglycerol kinase, putative, expressed	chr4	26926040	26933351	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g27700	microtubule associated protein, putative, expressed	gene	microtubule associated protein, putative, expressed	chr9	16854315	16860063	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g38530	STE_PAK_Ste20_Slob_Wnk.4 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	gene	STE_PAK_Ste20_Slob_Wnk.4 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	chr7	23144986	23148616	+	CDS,three_prime_UTR
3	LOC_Os10g04770	expressed protein	gene	expressed protein	chr10	2287913	2292054	-	CDS,three_prime_UTR
3	LOC_Os08g04780	amine oxidase, putative, expressed	gene	amine oxidase, putative, expressed	chr8	2384409	2388283	-	CDS,promoter
3	LOC_Os10g41560	expressed protein	gene	expressed protein	chr10	22261430	22268390	-	CDS,three_prime_UTR
3	LOC_Os08g43470	ER lumen protein retaining receptor, putative, expressed	gene	ER lumen protein retaining receptor, putative, expressed	chr8	27494476	27498675	+	CDS,three_prime_UTR
3	LOC_Os10g27170	calmodulin-binding protein, putative, expressed	gene	calmodulin-binding protein, putative, expressed	chr10	14248122	14252129	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g35260	TKL_IRAK_DUF26-lc.9 - DUF26 kinases have homology to DUF26 containing loci, expressed	gene	TKL_IRAK_DUF26-lc.9 - DUF26 kinases have homology to DUF26 containing loci, expressed	chr7	21103516	21109015	+	CDS,three_prime_UTR
3	LOC_Os05g13860	hypothetical protein	gene	hypothetical protein	chr5	7705443	7707947	+	CDS
3	LOC_Os03g25140	peptidyl-prolyl isomerase PASTICCINO1, putative, expressed	gene	peptidyl-prolyl isomerase PASTICCINO1, putative, expressed	chr3	14358019	14369428	+	CDS
3	LOC_Os03g19300	peptide chain release factor protein, putative, expressed	gene	peptide chain release factor protein, putative, expressed	chr3	10849512	10852672	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g50870	elongation factor Tu, putative, expressed	gene	elongation factor Tu, putative, expressed	chr4	29900342	29908330	-	five_prime_UTR,CDS
3	LOC_Os03g05806	pseudouridine synthase family protein, putative, expressed	gene	pseudouridine synthase family protein, putative, expressed	chr3	2900592	2905610	+	CDS,three_prime_UTR
3	LOC_Os03g17860	OsPDIL5-1  protein disulfide isomerase PDIL5-1, expressed	gene	OsPDIL5-1  protein disulfide isomerase PDIL5-1, expressed	chr3	9951724	9954074	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g43060	expressed protein	gene	expressed protein	chr10	23120814	23123560	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g27000	ATP-binding region, ATPase-like domain containing protein, expressed	gene	ATP-binding region, ATPase-like domain containing protein, expressed	chr2	15859462	15870619	+	CDS,three_prime_UTR
3	LOC_Os05g50290	hhH-GPD superfamily base excision DNA repair protein, putative, expressed	gene	hhH-GPD superfamily base excision DNA repair protein, putative, expressed	chr5	28763932	28765418	+	three_prime_UTR,downstream
3	LOC_Os03g58650	expressed protein	gene	expressed protein	chr3	33395423	33398309	+	CDS,three_prime_UTR
3	LOC_Os02g39550	calcium-binding mitochondrial protein anon-60Da, putative, expressed	gene	calcium-binding mitochondrial protein anon-60Da, putative, expressed	chr2	23860526	23869012	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g41210	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr1	23327754	23330748	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g39480	SPOC domain containing protein, putative, expressed	gene	SPOC domain containing protein, putative, expressed	chr6	23441842	23448456	-	CDS
3	LOC_Os03g05049	expressed protein	gene	expressed protein	chr3	2459726	2461186	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os08g13690	60S ribosomal protein L7, putative, expressed	gene	60S ribosomal protein L7, putative, expressed	chr8	8152373	8154985	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g39010	lactose permease-related, putative, expressed	gene	lactose permease-related, putative, expressed	chr7	23388381	23395919	+	CDS,three_prime_UTR
3	LOC_Os05g24594	coatomer subunit delta, putative, expressed	gene	coatomer subunit delta, putative, expressed	chr5	14123952	14128837	+	CDS
3	LOC_Os12g42300	potasium efflux antiporter protein, putative, expressed	gene	potasium efflux antiporter protein, putative, expressed	chr12	26266247	26272545	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g15770	tyrosine protein kinase domain containing protein, putative, expressed	gene	tyrosine protein kinase domain containing protein, putative, expressed	chr3	8696985	8701696	+	three_prime_UTR,downstream
3	LOC_Os01g28540	stress regulated protein, putative, expressed	gene	stress regulated protein, putative, expressed	chr1	15974298	15979598	+	CDS
3	LOC_Os06g41640	CC-NBS-LRR protein, putative, expressed	gene	CC-NBS-LRR protein, putative, expressed	chr6	24929058	24934196	-	CDS
3	LOC_Os05g44560	kinesin motor domain containing protein, expressed	gene	kinesin motor domain containing protein, expressed	chr5	25855906	25863497	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g31070	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr3	17701375	17708831	-	five_prime_UTR,CDS
3	LOC_Os08g41910	Sua5/YciO/YrdC/YwlC family protein, putative, expressed	gene	Sua5/YciO/YrdC/YwlC family protein, putative, expressed	chr8	26461777	26465088	+	CDS
3	LOC_Os03g02840	remorin family protein, putative, expressed	gene	remorin family protein, putative, expressed	chr3	1108240	1112043	-	CDS
3	LOC_Os02g46150	GAMM1 protein-like, putative, expressed	gene	GAMM1 protein-like, putative, expressed	chr2	28117342	28122296	-	CDS,three_prime_UTR
3	LOC_Os08g20544	expressed protein	gene	expressed protein	chr8	12330531	12341188	-	CDS
3	LOC_Os06g11800	annexin, putative, expressed	gene	annexin, putative, expressed	chr6	6249718	6252709	+	CDS
3	LOC_Os04g25360	tRNA methyltransferase complex GCD14 subunit, putative, expressed	gene	tRNA methyltransferase complex GCD14 subunit, putative, expressed	chr4	14666040	14669919	+	CDS,three_prime_UTR
3	LOC_Os08g08830	expressed protein	gene	expressed protein	chr8	5117738	5127137	-	three_prime_UTR
3	LOC_Os04g45190	MSP domain containing protein, expressed	gene	MSP domain containing protein, expressed	chr4	26527423	26530619	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g34040	ribosomal protein, putative, expressed	gene	ribosomal protein, putative, expressed	chr3	19411419	19415609	-	CDS,three_prime_UTR
3	LOC_Os05g45840	GTPase-activating protein, putative, expressed	gene	GTPase-activating protein, putative, expressed	chr5	26492361	26497391	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g21160	2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed	gene	2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed	chr1	11803085	11808035	-	CDS,three_prime_UTR
3	LOC_Os03g10224	MT-A70 domain containing protein, expressed	gene	MT-A70 domain containing protein, expressed	chr3	5201705	5205440	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g37250	transposon protein, putative, Mariner sub-class, expressed	gene	transposon protein, putative, Mariner sub-class, expressed	chr12	22815056	22817069	+	five_prime_UTR
3	LOC_Os07g07250	eukaryotic translation initiation factor 3 subunit E, putative, expressed	gene	eukaryotic translation initiation factor 3 subunit E, putative, expressed	chr7	3594697	3598708	+	CDS,three_prime_UTR
3	LOC_Os04g59560	tubulin folding cofactor B, putative, expressed	gene	tubulin folding cofactor B, putative, expressed	chr4	35237865	35241716	-	CDS
3	LOC_Os07g16140	FAD binding protein, putative, expressed	gene	FAD binding protein, putative, expressed	chr7	9398392	9402951	+	CDS,three_prime_UTR,promoter
3	LOC_Os06g50330	senescence-associated protein, putative, expressed	gene	senescence-associated protein, putative, expressed	chr6	30463799	30467104	-	CDS,three_prime_UTR
3	LOC_Os08g12740	disease resistance protein RGA3, putative, expressed	gene	disease resistance protein RGA3, putative, expressed	chr8	7538946	7550994	-	three_prime_UTR,promoter
3	LOC_Os05g46920	expressed protein	gene	expressed protein	chr5	27087970	27091195	+	three_prime_UTR
3	LOC_Os06g05190	BRCA1 C Terminus domain containing protein, expressed	gene	BRCA1 C Terminus domain containing protein, expressed	chr6	2328884	2333475	+	CDS,three_prime_UTR
3	LOC_Os05g24880	dehydrogenase, putative, expressed	gene	dehydrogenase, putative, expressed	chr5	14350450	14356543	+	CDS
3	LOC_Os06g02480	expressed protein	gene	expressed protein	chr6	854811	857005	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g31730	expressed protein	gene	expressed protein	chr3	18117543	18142079	+	CDS,three_prime_UTR
3	LOC_Os04g57190	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	gene	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	chr4	33888059	33892185	-	CDS,three_prime_UTR
3	LOC_Os08g17080	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr8	10452821	10457049	+	CDS,three_prime_UTR
3	LOC_Os10g22060	hypothetical protein	gene	hypothetical protein	chr10	11321534	11325441	-	CDS,promoter
3	LOC_Os11g08330	POLD1 - Putative DNA polymerase delta catalytic subunit, expressed	gene	POLD1 - Putative DNA polymerase delta catalytic subunit, expressed	chr11	4383362	4393710	-	CDS,three_prime_UTR
3	LOC_Os03g02730	expressed protein	gene	expressed protein	chr3	1023730	1025759	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g08100	hydrolase, alpha/beta fold family protein, putative, expressed	gene	hydrolase, alpha/beta fold family protein, putative, expressed	chr3	4132460	4135492	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g29550	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr2	17569220	17576358	+	CDS,five_prime_UTR
3	LOC_Os12g42400	nuclear transcription factor Y subunit, putative, expressed	gene	nuclear transcription factor Y subunit, putative, expressed	chr12	26313257	26317683	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g33660	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr8	21016657	21018750	-	five_prime_UTR,downstream
3	LOC_Os09g39210	nuclear pore protein-like, putative, expressed	gene	nuclear pore protein-like, putative, expressed	chr9	22526772	22535091	+	CDS
3	LOC_Os01g51790	conserved hypothetical protein	gene	conserved hypothetical protein	chr1	29779234	29782103	+	CDS,downstream
3	LOC_Os05g04620	expressed protein	gene	expressed protein	chr5	2172180	2174187	+	CDS,promoter
3	LOC_Os12g12950	expressed protein	gene	expressed protein	chr12	7169200	7173968	-	CDS,three_prime_UTR
3	LOC_Os02g45520	uncharacterized membrane protein, putative, expressed	gene	uncharacterized membrane protein, putative, expressed	chr2	27690418	27696324	+	five_prime_UTR
3	LOC_Os06g10280	CDP-alcohol phosphatidyltransferase, putative, expressed	gene	CDP-alcohol phosphatidyltransferase, putative, expressed	chr6	5275591	5284927	-	CDS
3	LOC_Os03g21720	vacuolar-sorting receptor precursor, putative, expressed	gene	vacuolar-sorting receptor precursor, putative, expressed	chr3	12400656	12407191	+	CDS
3	LOC_Os08g12830	cytidylyltransferase domain containing protein, expressed	gene	cytidylyltransferase domain containing protein, expressed	chr8	7604604	7609232	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g33830	polypyrimidine tract-binding protein, putative, expressed	gene	polypyrimidine tract-binding protein, putative, expressed	chr8	21170705	21176488	-	CDS
3	LOC_Os06g37160	transmembrane 9 superfamily member, putative, expressed	gene	transmembrane 9 superfamily member, putative, expressed	chr6	21953469	21958760	-	CDS,three_prime_UTR
3	LOC_Os01g60780	solute carrier family 35 member E3, putative, expressed	gene	solute carrier family 35 member E3, putative, expressed	chr1	35147661	35152040	+	CDS,three_prime_UTR
3	LOC_Os08g32080	CPuORF27 - conserved peptide uORF-containing transcript, expressed	gene	CPuORF27 - conserved peptide uORF-containing transcript, expressed	chr8	19881299	19885645	-	CDS
3	LOC_Os06g04510	enolase, putative, expressed	gene	enolase, putative, expressed	chr6	1930297	1935381	-	five_prime_UTR,CDS,promoter
3	LOC_Os03g17950	expressed protein	gene	expressed protein	chr3	9993853	9997849	+	CDS,three_prime_UTR
3	LOC_Os03g21490	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr3	12274941	12278888	-	CDS,three_prime_UTR
3	LOC_Os05g23260	OsSigP4 - Putative Type I Signal Peptidase homologue; employs a putative Ser/His catalytic dyad, expressed	gene	OsSigP4 - Putative Type I Signal Peptidase homologue; employs a putative Ser/His catalytic dyad, expressed	chr5	13225312	13229199	+	CDS
3	LOC_Os01g61910	KIP1, putative, expressed	gene	KIP1, putative, expressed	chr1	35831923	35835332	-	CDS,promoter
3	LOC_Os06g05950	expressed protein	gene	expressed protein	chr6	2723124	2725539	-	three_prime_UTR,CDS
3	LOC_Os05g48770	expressed protein	gene	expressed protein	chr5	27888411	27890775	-	CDS,downstream
3	LOC_Os04g55570	plant protein of unknown function DUF869 domain containing protein, expressed	gene	plant protein of unknown function DUF869 domain containing protein, expressed	chr4	32895778	32901308	+	CDS
3	LOC_Os06g44890	villin protein, putative, expressed	gene	villin protein, putative, expressed	chr6	27134558	27143860	-	CDS,three_prime_UTR
3	LOC_Os03g21520	expressed protein	gene	expressed protein	chr3	12290529	12295580	-	CDS,promoter
3	LOC_Os03g46490	40S ribosomal protein S21, putative, expressed	gene	40S ribosomal protein S21, putative, expressed	chr3	26301600	26305942	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os04g39410	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr4	23272832	23276202	-	CDS,three_prime_UTR
3	LOC_Os11g18940	WW domain containing protein, expressed	gene	WW domain containing protein, expressed	chr11	10771040	10772747	+	three_prime_UTR,downstream
3	LOC_Os07g08820	C-Myc-binding protein, putative, expressed	gene	C-Myc-binding protein, putative, expressed	chr7	4556243	4558679	+	CDS,three_prime_UTR
3	LOC_Os03g51220	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed	gene	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed	chr3	29289128	29295132	+	CDS
3	LOC_Os09g12500	EMB1381, putative, expressed	gene	EMB1381, putative, expressed	chr9	7165573	7170386	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g04460	ribosomal protein L3, putative, expressed	gene	ribosomal protein L3, putative, expressed	chr2	1972935	1974663	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g33850	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr7	20248146	20252109	+	CDS,three_prime_UTR
3	LOC_Os02g37050	phosphatidylinositolglycan class N family protein, expressed	gene	phosphatidylinositolglycan class N family protein, expressed	chr2	22375330	22384137	+	CDS
3	LOC_Os08g40110	peptidase, putative, expressed	gene	peptidase, putative, expressed	chr8	25385646	25389606	-	CDS,three_prime_UTR
3	LOC_Os03g09940	sulfate transporter, putative, expressed	gene	sulfate transporter, putative, expressed	chr3	4953103	4958450	-	CDS
3	LOC_Os02g56190	expressed protein	gene	expressed protein	chr2	34364172	34366180	-	three_prime_UTR,promoter,downstream
3	LOC_Os10g22100	expressed protein	gene	expressed protein	chr10	11343053	11345894	+	CDS,three_prime_UTR
3	LOC_Os01g42770	expressed protein	gene	expressed protein	chr1	24340170	24342541	+	CDS
3	LOC_Os09g10910	fiber protein Fb34, putative, expressed	gene	fiber protein Fb34, putative, expressed	chr9	5990120	5995533	-	CDS,three_prime_UTR
3	LOC_Os02g43850	serine esterase family protein, putative, expressed	gene	serine esterase family protein, putative, expressed	chr2	26470787	26475369	-	CDS,three_prime_UTR
3	LOC_Os02g06700	ribosomal protein, putative, expressed	gene	ribosomal protein, putative, expressed	chr2	3358901	3360718	-	CDS,three_prime_UTR
3	LOC_Os03g55620	CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr3	31667445	31671597	+	three_prime_UTR
3	LOC_Os04g44210	expressed protein	gene	expressed protein	chr4	25983483	25988779	-	CDS,three_prime_UTR
3	LOC_Os12g09670	expressed protein	gene	expressed protein	chr12	5102715	5106173	-	CDS
3	LOC_Os05g41540	bZIP transcription factor domain containing protein, expressed	gene	bZIP transcription factor domain containing protein, expressed	chr5	24258419	24260200	-	three_prime_UTR,promoter
3	LOC_Os02g32760	60S acidic ribosomal protein, putative, expressed	gene	60S acidic ribosomal protein, putative, expressed	chr2	19449254	19452482	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g10220	methyladenine glycosylase, putative	gene	methyladenine glycosylase, putative	chr3	5199523	5205413	-	CDS
3	LOC_Os03g48380	expressed protein	gene	expressed protein	chr3	27539164	27543130	-	CDS
3	LOC_Os02g11760	pleiotropic drug resistance protein, putative, expressed	gene	pleiotropic drug resistance protein, putative, expressed	chr2	6069031	6075807	+	CDS,downstream
3	LOC_Os07g38550	expressed protein	gene	expressed protein	chr7	23154130	23156354	+	five_prime_UTR,promoter
3	LOC_Os07g12540	expressed protein	gene	expressed protein	chr7	7159928	7161249	-	CDS,downstream
3	LOC_Os03g60170	expressed protein	gene	expressed protein	chr3	34212816	34215553	-	CDS,promoter
3	LOC_Os12g31370	DNA repair protein Rad51, putative, expressed	gene	DNA repair protein Rad51, putative, expressed	chr12	18847550	18850639	+	three_prime_UTR,downstream
3	LOC_Os09g17630	receptor-like protein kinase 2, putative, expressed	gene	receptor-like protein kinase 2, putative, expressed	chr9	10784209	10792868	+	CDS
3	LOC_Os06g45820	OsFtsH2  FtsH protease, homologue of AtFtsH2/8, expressed	gene	OsFtsH2  FtsH protease, homologue of AtFtsH2/8, expressed	chr6	27723567	27727318	-	CDS,three_prime_UTR,downstream
3	LOC_Os06g39344	enoyl-CoA hydratase/isomerase family protein, putative, expressed	gene	enoyl-CoA hydratase/isomerase family protein, putative, expressed	chr6	23342931	23349823	+	CDS
3	LOC_Os04g55410	FGGY family of carbohydrate kinases, putative, expressed	gene	FGGY family of carbohydrate kinases, putative, expressed	chr4	32770597	32774831	-	CDS
3	LOC_Os03g43760	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr3	24474090	24479009	+	CDS
3	LOC_Os10g41310	DUF630/DUF632 domains containing protein, putative, expressed	gene	DUF630/DUF632 domains containing protein, putative, expressed	chr10	22126588	22130809	-	CDS,three_prime_UTR
3	LOC_Os12g04290	PP2A regulatory subunit TAP46, putative, expressed	gene	PP2A regulatory subunit TAP46, putative, expressed	chr12	1816612	1820694	+	CDS
3	LOC_Os12g34870	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr12	21192352	21195968	-	three_prime_UTR,CDS,promoter,downstream
3	LOC_Os02g27490	bile acid sodium symporter family protein, putative, expressed	gene	bile acid sodium symporter family protein, putative, expressed	chr2	16259510	16262965	+	three_prime_UTR
3	LOC_Os09g10770	OsTOP6B - Topoisomerase 6 subunit B, expressed	gene	OsTOP6B - Topoisomerase 6 subunit B, expressed	chr9	5873972	5882020	+	CDS
3	LOC_Os01g48920	beclin-1, putative, expressed	gene	beclin-1, putative, expressed	chr1	28069635	28075384	-	CDS
3	LOC_Os08g10260	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr8	5963413	5966850	-	CDS
3	LOC_Os01g12710	oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed	gene	oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed	chr1	7023297	7029610	+	CDS,three_prime_UTR
3	LOC_Os05g15360	expressed protein	gene	expressed protein	chr5	8691700	8696391	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g43520	BSD, putative, expressed	gene	BSD, putative, expressed	chr5	25233128	25236560	+	CDS
3	LOC_Os01g70080	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr1	40554964	40560318	-	CDS,three_prime_UTR
3	LOC_Os11g45790	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr11	27232148	27235697	-	CDS
3	LOC_Os05g48620	tRNA-binding arm, putative, expressed	gene	tRNA-binding arm, putative, expressed	chr5	27805829	27814895	-	CDS
3	LOC_Os01g56600	signal recognition particle 54 kDa protein, putative, expressed	gene	signal recognition particle 54 kDa protein, putative, expressed	chr1	32651438	32655557	+	CDS
3	LOC_Os01g69040	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr1	40114864	40120071	+	CDS,three_prime_UTR
3	LOC_Os06g40704	stromal membrane-associated protein, putative, expressed	gene	stromal membrane-associated protein, putative, expressed	chr6	24263407	24267018	+	CDS,three_prime_UTR
3	LOC_Os05g33880	cysteine proteinase inhibitor precursor protein, putative, expressed	gene	cysteine proteinase inhibitor precursor protein, putative, expressed	chr5	19921235	19925189	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g02380	kinesin motor domain containing protein, putative, expressed	gene	kinesin motor domain containing protein, putative, expressed	chr8	947035	951598	+	CDS,downstream
3	LOC_Os04g35380	expressed protein	gene	expressed protein	chr4	21341520	21347082	+	three_prime_UTR,CDS
3	LOC_Os12g03540	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr12	1404136	1408433	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g07740	eukaryotic translation initiation factor 2 subunit gamma, putative, expressed	gene	eukaryotic translation initiation factor 2 subunit gamma, putative, expressed	chr12	3884386	3888692	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g04000	ECT protein, putative, expressed	gene	ECT protein, putative, expressed	chr4	1838602	1843854	+	CDS,downstream
3	LOC_Os03g15033	expressed protein	gene	expressed protein	chr3	8206521	8210851	-	CDS,three_prime_UTR
3	LOC_Os11g29490	plasma membrane ATPase, putative, expressed	gene	plasma membrane ATPase, putative, expressed	chr11	16642596	16649451	+	CDS,three_prime_UTR
3	LOC_Os08g37140	phosphoglycerate mutase, putative, expressed	gene	phosphoglycerate mutase, putative, expressed	chr8	23466030	23469894	-	CDS
3	LOC_Os12g07780	eukaryotic aspartyl protease domain containing protein, expressed	gene	eukaryotic aspartyl protease domain containing protein, expressed	chr12	3931454	3934989	+	CDS,three_prime_UTR
3	LOC_Os03g56380	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr3	32134994	32139544	+	CDS,three_prime_UTR
3	LOC_Os01g31810	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr1	17421754	17428347	-	three_prime_UTR
3	LOC_Os02g03560	expressed protein	gene	expressed protein	chr2	1447115	1449636	+	three_prime_UTR
3	LOC_Os06g14750	phosphatidylinositol-4-phosphate 5-Kinase family protein, putative, expressed	gene	phosphatidylinositol-4-phosphate 5-Kinase family protein, putative, expressed	chr6	8316760	8324556	-	CDS,promoter
3	LOC_Os02g06390	expressed protein	gene	expressed protein	chr2	3191312	3194141	-	three_prime_UTR,promoter
3	LOC_Os06g07620	expressed protein	gene	expressed protein	chr6	3681378	3687696	+	CDS
3	LOC_Os09g39640	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr9	22746876	22751730	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g13100	CREG1 precursor, putative, expressed	gene	CREG1 precursor, putative, expressed	chr6	7187390	7190452	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g38590	receptor-like protein kinase precursor, putative, expressed	gene	receptor-like protein kinase precursor, putative, expressed	chr6	22862177	22865875	+	CDS
3	LOC_Os03g05270	RING finger and CHY zinc finger domain-containing protein 1, putative, expressed	gene	RING finger and CHY zinc finger domain-containing protein 1, putative, expressed	chr3	2547613	2551713	+	CDS
3	LOC_Os05g41120	endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed	gene	endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed	chr5	24018520	24024430	+	CDS,three_prime_UTR
3	LOC_Os05g49880	lactate/malate dehydrogenase, putative, expressed	gene	lactate/malate dehydrogenase, putative, expressed	chr5	28554950	28558940	-	CDS
3	LOC_Os07g37990	glycosyltransferase sugar-binding region containing DXD motif, putative, expressed	gene	glycosyltransferase sugar-binding region containing DXD motif, putative, expressed	chr7	22790768	22797444	-	CDS
3	LOC_Os06g01400	glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor, putative, expressed	gene	glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor, putative, expressed	chr6	232787	243624	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g27080	calmodulin-binding transcription activator 2, putative, expressed	gene	calmodulin-binding transcription activator 2, putative, expressed	chr3	15503026	15506378	+	CDS,promoter
3	LOC_Os12g37630	domain of unknown function family protein, expressed	gene	domain of unknown function family protein, expressed	chr12	23068480	23071642	+	three_prime_UTR,CDS
3	LOC_Os04g47270	amine oxidase, putative, expressed	gene	amine oxidase, putative, expressed	chr4	27881961	27885236	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os08g25140	ethanol tolerance protein GEKO1, putative, expressed	gene	ethanol tolerance protein GEKO1, putative, expressed	chr8	15270840	15275096	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g20150	expressed protein	gene	expressed protein	chr7	11631046	11635664	-	CDS,promoter
3	LOC_Os04g48770	ubiquitin fusion degradation protein, putative, expressed	gene	ubiquitin fusion degradation protein, putative, expressed	chr4	28903682	28907856	+	CDS
3	LOC_Os07g30810	nucleobase-ascorbate transporter, putative, expressed	gene	nucleobase-ascorbate transporter, putative, expressed	chr7	18235243	18240482	+	CDS,downstream
3	LOC_Os08g34340	DUF593 domain containing protein, expressed	gene	DUF593 domain containing protein, expressed	chr8	21549197	21555876	+	five_prime_UTR,CDS
3	LOC_Os09g26400	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr9	15943514	15946916	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g39760	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr10	21182045	21185175	+	CDS,three_prime_UTR
3	LOC_Os11g38250	expressed protein	gene	expressed protein	chr11	22192285	22194086	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g03820	expressed protein	gene	expressed protein	chr2	1603358	1607212	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g22390	short chain dehydrogenase/reductase protein, putative, expressed	gene	short chain dehydrogenase/reductase protein, putative, expressed	chr4	12660510	12664660	+	CDS
3	LOC_Os03g10120	proteasome subunit, putative, expressed	gene	proteasome subunit, putative, expressed	chr3	5117176	5123621	-	CDS,three_prime_UTR
3	LOC_Os07g03050	expressed protein	gene	expressed protein	chr7	1155501	1158170	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g42310	hypothetical protein	gene	hypothetical protein	chr3	23539189	23541119	+	CDS,downstream
3	LOC_Os02g34990	ACT domain containing protein, putative, expressed	gene	ACT domain containing protein, putative, expressed	chr2	20980055	20988383	+	five_prime_UTR,CDS,downstream
3	LOC_Os05g43440	single-stranded DNA-binding protein, putative, expressed	gene	single-stranded DNA-binding protein, putative, expressed	chr5	25192231	25197168	-	three_prime_UTR,downstream
3	LOC_Os02g19550	lectin-like receptor kinase, putative, expressed	gene	lectin-like receptor kinase, putative, expressed	chr2	11427540	11429900	+	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g22630	ECT protein, putative, expressed	gene	ECT protein, putative, expressed	chr1	12724115	12730500	+	CDS
3	LOC_Os07g32460	src homology-3 domain protein 3, putative, expressed	gene	src homology-3 domain protein 3, putative, expressed	chr7	19308974	19314485	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g49560	bZIP transcription factor domain containing protein, expressed	gene	bZIP transcription factor domain containing protein, expressed	chr2	30289740	30290249	+	CDS,promoter,downstream
3	LOC_Os01g14100	BT1 family protein, putative, expressed	gene	BT1 family protein, putative, expressed	chr1	7893959	7899874	-	CDS,five_prime_UTR,promoter
3	LOC_Os02g49460	auxin-independent growth promoter protein, putative, expressed	gene	auxin-independent growth promoter protein, putative, expressed	chr2	30220537	30224849	+	CDS,three_prime_UTR
3	LOC_Os04g10460	amidase, putative, expressed	gene	amidase, putative, expressed	chr4	5681891	5684930	+	CDS
3	LOC_Os12g12260	diacylglycerol kinase 1, putative, expressed	gene	diacylglycerol kinase 1, putative, expressed	chr12	6728516	6733263	-	CDS,three_prime_UTR
3	LOC_Os06g04610	ribosome-binding factor A, chloroplast precursor, putative, expressed	gene	ribosome-binding factor A, chloroplast precursor, putative, expressed	chr6	2008997	2014660	+	three_prime_UTR
3	LOC_Os03g61220	DEAD-box ATP-dependent RNA helicase 3, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase 3, putative, expressed	chr3	34758809	34765216	+	CDS
3	LOC_Os07g45064	Phosphatidylinositol kinase and FAT containing domain protein, putative, expressed	gene	Phosphatidylinositol kinase and FAT containing domain protein, putative, expressed	chr7	26885313	26891123	-	CDS
3	LOC_Os01g57240	expressed protein	gene	expressed protein	chr1	33072457	33077924	-	three_prime_UTR
3	LOC_Os06g50670	expressed protein	gene	expressed protein	chr6	30665878	30668456	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g02440	DCL, chloroplast precursor, putative, expressed	gene	DCL, chloroplast precursor, putative, expressed	chr9	1005780	1011534	-	CDS,three_prime_UTR
3	LOC_Os06g34440	dnaJ domain containing protein, expressed	gene	dnaJ domain containing protein, expressed	chr6	20033669	20041687	-	CDS,three_prime_UTR
3	LOC_Os04g31000	methyltransferase domain containing protein, expressed	gene	methyltransferase domain containing protein, expressed	chr4	18348456	18358985	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g74610	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr1	43201430	43214209	-	CDS
3	LOC_Os11g45280	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr11	26927706	26934995	+	CDS,three_prime_UTR
3	LOC_Os10g42190	leucine rich repeat containing protein, expressed	gene	leucine rich repeat containing protein, expressed	chr10	22619206	22623622	+	three_prime_UTR
3	LOC_Os04g56440	ENT domain containing protein, expressed	gene	ENT domain containing protein, expressed	chr4	33459960	33465032	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g23690	UBX domain containing protein, expressed	gene	UBX domain containing protein, expressed	chr9	14082858	14086561	-	three_prime_UTR
3	LOC_Os04g51120	ENTH domain containing protein, expressed	gene	ENTH domain containing protein, expressed	chr4	30086093	30091155	+	CDS,three_prime_UTR
3	LOC_Os05g45270	ribosomal L9, putative, expressed	gene	ribosomal L9, putative, expressed	chr5	26213963	26216774	+	CDS,downstream
3	LOC_Os01g58760	bZIP transcription factor domain containing protein, expressed	gene	bZIP transcription factor domain containing protein, expressed	chr1	33961581	33962508	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g02950	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr2	1154674	1157039	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g59620	phospholipase, patatin family, putative, expressed	gene	phospholipase, patatin family, putative, expressed	chr3	33934494	33939017	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g28010	TATA-binding protein-associated factor TAFII55 family protein, putative, expressed	gene	TATA-binding protein-associated factor TAFII55 family protein, putative, expressed	chr5	16286336	16289100	-	CDS,three_prime_UTR
3	LOC_Os11g32390	hypothetical protein	gene	hypothetical protein	chr11	18662360	18664022	-	CDS,promoter
3	LOC_Os04g35650	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr4	21553351	21556290	-	CDS
3	LOC_Os06g42560	tryptophan synthase beta chain 2, putative, expressed	gene	tryptophan synthase beta chain 2, putative, expressed	chr6	25589236	25593491	-	CDS
3	LOC_Os02g33750	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr2	20129640	20134860	-	CDS,three_prime_UTR
3	LOC_Os06g51380	ROOT HAIRLESS 1, putative, expressed	gene	ROOT HAIRLESS 1, putative, expressed	chr6	31117749	31120615	+	CDS,downstream
3	LOC_Os08g39060	F-box protein At-B, putative, expressed	gene	F-box protein At-B, putative, expressed	chr8	24674869	24677686	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g56310	5-nucleotidase domain-containing protein, putative, expressed	gene	5-nucleotidase domain-containing protein, putative, expressed	chr3	32089724	32096951	-	three_prime_UTR,CDS
3	LOC_Os05g11750	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr5	6666439	6671912	-	CDS
3	LOC_Os09g37420	OsSAUR47 - Auxin-responsive SAUR gene family member, expressed	gene	OsSAUR47 - Auxin-responsive SAUR gene family member, expressed	chr9	21591758	21592348	+	five_prime_UTR,CDS,promoter
3	LOC_Os05g30140	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr5	17385770	17392938	+	CDS,three_prime_UTR
3	LOC_Os02g07750	cell cycle control protein, putative, expressed	gene	cell cycle control protein, putative, expressed	chr2	4038428	4042354	-	CDS,promoter
3	LOC_Os03g10190	seryl-tRNA synthetase, putative, expressed	gene	seryl-tRNA synthetase, putative, expressed	chr3	5166309	5169697	+	CDS,three_prime_UTR,promoter
3	LOC_Os11g40090	A49-like RNA polymerase I associated factor family protein, expressed	gene	A49-like RNA polymerase I associated factor family protein, expressed	chr11	23443735	23447182	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g16680	fructose-1,6-bisphosphatase, putative, expressed	gene	fructose-1,6-bisphosphatase, putative, expressed	chr4	9070414	9073163	-	CDS
3	LOC_Os11g05540	rhoGAP domain containing protein, expressed	gene	rhoGAP domain containing protein, expressed	chr11	2496336	2501137	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g45040	OsFBX170 - F-box domain containing protein, expressed	gene	OsFBX170 - F-box domain containing protein, expressed	chr5	26114808	26117202	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os08g09210	phosphoribosylamine--glycine ligase, putative, expressed	gene	phosphoribosylamine--glycine ligase, putative, expressed	chr8	5340433	5344424	+	CDS
3	LOC_Os05g06760	macrophage erythroblast attacher, putative, expressed	gene	macrophage erythroblast attacher, putative, expressed	chr5	3531392	3534864	+	CDS,three_prime_UTR,promoter
3	LOC_Os09g32680	cyclin, putative, expressed	gene	cyclin, putative, expressed	chr9	19498549	19502723	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g39540	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr2	23853968	23858768	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g40780	CCR4-Not complex component, Not1domain containing protein, expressed	gene	CCR4-Not complex component, Not1domain containing protein, expressed	chr10	21812892	21832062	-	CDS,three_prime_UTR
3	LOC_Os02g56050	rhodanese-like domain containing protein, putative, expressed	gene	rhodanese-like domain containing protein, putative, expressed	chr2	34303549	34305979	-	CDS
3	LOC_Os02g03080	eukaryotic translation initiation factor 3 subunit C, putative, expressed	gene	eukaryotic translation initiation factor 3 subunit C, putative, expressed	chr2	1219306	1222866	+	CDS,promoter,downstream
3	LOC_Os03g15810	AAA-type ATPase family protein, putative, expressed	gene	AAA-type ATPase family protein, putative, expressed	chr3	8719299	8726968	-	CDS
3	LOC_Os05g41240	Myb-like DNA-binding domain containing protein, putative, expressed	gene	Myb-like DNA-binding domain containing protein, putative, expressed	chr5	24091152	24095475	-	CDS,three_prime_UTR
3	LOC_Os05g30420	expressed protein	gene	expressed protein	chr5	17570622	17573022	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g52630	endoglucanase, putative, expressed	gene	endoglucanase, putative, expressed	chr3	30174675	30178192	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g51500	expressed protein	gene	expressed protein	chr4	30325392	30328749	-	CDS,three_prime_UTR
3	LOC_Os05g40990	NADH-cytochrome b5 reductase, putative, expressed	gene	NADH-cytochrome b5 reductase, putative, expressed	chr5	23965195	23968348	+	CDS,three_prime_UTR
3	LOC_Os07g40730	SNF2 domain-containing protein, putative, expressed	gene	SNF2 domain-containing protein, putative, expressed	chr7	24402305	24415689	+	CDS,three_prime_UTR
3	LOC_Os03g22870	SAC3/GANP family protein, putative, expressed	gene	SAC3/GANP family protein, putative, expressed	chr3	13216769	13220951	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g31410	sulfate transporter, putative, expressed	gene	sulfate transporter, putative, expressed	chr8	19424710	19429995	+	five_prime_UTR,CDS
3	LOC_Os11g14544	expressed protein	gene	expressed protein	chr11	8159097	8165899	-	CDS
3	LOC_Os05g32390	FZL, putative, expressed	gene	FZL, putative, expressed	chr5	18829465	18838346	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g10960	expressed protein	gene	expressed protein	chr7	6014224	6016400	+	CDS,promoter
3	LOC_Os05g36960	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr5	21525083	21530858	+	CDS
3	LOC_Os06g11770	hypothetical protein	gene	hypothetical protein	chr6	6236709	6237081	+	CDS,downstream
3	LOC_Os09g34860	hydrolase, alpha/beta fold family domain containing protein, expressed	gene	hydrolase, alpha/beta fold family domain containing protein, expressed	chr9	20316429	20320654	+	CDS
3	LOC_Os01g15480	EMB3013, putative, expressed	gene	EMB3013, putative, expressed	chr1	8690739	8698628	-	CDS,downstream
3	LOC_Os01g08280	expressed protein	gene	expressed protein	chr1	4058510	4062190	+	CDS
3	LOC_Os12g41810	expressed protein	gene	expressed protein	chr12	25860711	25864435	-	CDS,three_prime_UTR
3	LOC_Os07g43925	expressed protein	gene	expressed protein	chr7	26255484	26258194	+	three_prime_UTR,downstream
3	LOC_Os05g09550	Der1-like family domain containing protein, expressed	gene	Der1-like family domain containing protein, expressed	chr5	5394314	5398119	-	CDS,three_prime_UTR
3	LOC_Os03g49400	ethylene-insensitive protein, putative, expressed	gene	ethylene-insensitive protein, putative, expressed	chr3	28109674	28117271	+	CDS
3	LOC_Os12g41390	homocysteine S-methyltransferase protein, putative, expressed	gene	homocysteine S-methyltransferase protein, putative, expressed	chr12	25608238	25612103	+	three_prime_UTR,CDS
3	LOC_Os07g31010	hypothetical protein	gene	hypothetical protein	chr7	18359169	18362701	-	CDS,promoter
3	LOC_Os04g02110	disease resistance protein RGA3, putative, expressed	gene	disease resistance protein RGA3, putative, expressed	chr4	680114	686715	-	CDS,three_prime_UTR
3	LOC_Os06g05700	cysteine synthase, putative, expressed	gene	cysteine synthase, putative, expressed	chr6	2578089	2580727	+	CDS,downstream
3	LOC_Os01g63950	expressed protein	gene	expressed protein	chr1	37122029	37125806	+	CDS,three_prime_UTR
3	LOC_Os04g41460	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr4	24381965	24386566	-	CDS,three_prime_UTR
3	LOC_Os02g50860	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr2	31078555	31082315	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g53700	PHD-finger domain containing protein, putative, expressed	gene	PHD-finger domain containing protein, putative, expressed	chr3	30784503	30789908	+	CDS,three_prime_UTR
3	LOC_Os03g51250	adenylyl cyclase-associated protein, putative, expressed	gene	adenylyl cyclase-associated protein, putative, expressed	chr3	29308849	29313811	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g38030	CDK5RAP1, putative, expressed	gene	CDK5RAP1, putative, expressed	chr11	22095414	22099273	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g59520	cupin, RmlC-type, putative, expressed	gene	cupin, RmlC-type, putative, expressed	chr1	34416034	34419287	+	CDS,downstream
3	LOC_Os03g16220	oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed	gene	oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed	chr3	8944001	8946919	-	CDS,three_prime_UTR
3	LOC_Os02g42310	OsSCP8 - Putative Serine Carboxypeptidase homologue, expressed	gene	OsSCP8 - Putative Serine Carboxypeptidase homologue, expressed	chr2	25437006	25444260	+	three_prime_UTR,downstream
3	LOC_Os01g25770	hypothetical protein	gene	hypothetical protein	chr1	14604148	14604944	-	CDS,promoter
3	LOC_Os11g17954	transposon protein, putative, Pong sub-class, expressed	gene	transposon protein, putative, Pong sub-class, expressed	chr11	10076363	10080757	-	CDS
3	LOC_Os10g04130	expressed protein	gene	expressed protein	chr10	1912129	1914804	+	three_prime_UTR,downstream
3	LOC_Os04g09530	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr4	5107121	5109158	-	three_prime_UTR,promoter
3	LOC_Os06g04350	expressed protein	gene	expressed protein	chr6	1848924	1852899	-	CDS
3	LOC_Os01g50120	expressed protein	gene	expressed protein	chr1	28797829	28803416	+	three_prime_UTR
3	LOC_Os02g13130	KH domain-containing protein, putative, expressed	gene	KH domain-containing protein, putative, expressed	chr2	6979511	6985051	+	three_prime_UTR,CDS
3	LOC_Os11g37330	pentatricopeptide repeat domain containing protein, putative, expressed	gene	pentatricopeptide repeat domain containing protein, putative, expressed	chr11	21574239	21578842	+	CDS,three_prime_UTR
3	LOC_Os07g16960	glycosyl transferase, group 1 domain containing protein, expressed	gene	glycosyl transferase, group 1 domain containing protein, expressed	chr7	9975525	9979350	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g57340	chaperone protein dnaJ, putative, expressed	gene	chaperone protein dnaJ, putative, expressed	chr3	32701282	32704202	+	CDS
3	LOC_Os02g34750	leucine-rich repeat receptor-like protein kinase 1, putative, expressed	gene	leucine-rich repeat receptor-like protein kinase 1, putative, expressed	chr2	20833819	20840346	-	CDS,three_prime_UTR
3	LOC_Os11g04070	60S acidic ribosomal protein P0, putative, expressed	gene	60S acidic ribosomal protein P0, putative, expressed	chr11	1645484	1647854	-	CDS
3	LOC_Os06g43700	transmembrane amino acid transporter protein, putative, expressed	gene	transmembrane amino acid transporter protein, putative, expressed	chr6	26311605	26314066	-	three_prime_UTR,promoter,downstream
3	LOC_Os12g04510	DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative, expressed	gene	DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative, expressed	chr12	1916838	1919667	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os12g07290	alpha-1,4-fucosyltransferase, putative, expressed	gene	alpha-1,4-fucosyltransferase, putative, expressed	chr12	3582427	3586385	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g31120	expressed protein	gene	expressed protein	chr8	19217735	19221821	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g44220	glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed	gene	glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed	chr1	25352725	25361155	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g03610	1,3-beta-glucan synthase component domain containing protein, expressed	gene	1,3-beta-glucan synthase component domain containing protein, expressed	chr3	1581172	1601059	-	CDS
3	LOC_Os01g12210	aluminum-activated malate transporter, putative, expressed	gene	aluminum-activated malate transporter, putative, expressed	chr1	6658149	6661582	+	five_prime_UTR,CDS,promoter
3	LOC_Os04g24610	expressed protein	gene	expressed protein	chr4	14122360	14126505	-	three_prime_UTR
3	LOC_Os02g10180	dnaJ homolog subfamily C member, putative, expressed	gene	dnaJ homolog subfamily C member, putative, expressed	chr2	5331894	5336986	-	CDS
3	LOC_Os02g14090	berberine and berberine like domain containing protein, expressed	gene	berberine and berberine like domain containing protein, expressed	chr2	7690242	7692253	+	CDS,three_prime_UTR
3	LOC_Os01g07600	expressed protein	gene	expressed protein	chr1	3651273	3655479	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g56200	expressed protein	gene	expressed protein	chr3	32012449	32014062	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g29570	expressed protein	gene	expressed protein	chr12	17618414	17620147	+	three_prime_UTR,promoter,downstream
3	LOC_Os03g16440	outer membrane protein, OMP85 family, putative, expressed	gene	outer membrane protein, OMP85 family, putative, expressed	chr3	9067275	9072998	+	CDS,three_prime_UTR,promoter
3	LOC_Os06g02240	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr6	698045	701213	+	three_prime_UTR
3	LOC_Os05g46580	polyprenyl synthetase, putative, expressed	gene	polyprenyl synthetase, putative, expressed	chr5	26903789	26907261	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g06710	amidase, putative, expressed	gene	amidase, putative, expressed	chr10	3471135	3474164	+	CDS,promoter,downstream
3	LOC_Os11g04935	GIY-YIG catalytic domain containing protein, putative, expressed	gene	GIY-YIG catalytic domain containing protein, putative, expressed	chr11	2103439	2105183	-	CDS,promoter
3	LOC_Os01g55430	OsFBT2 - F-box and tubby domain containing protein, expressed	gene	OsFBT2 - F-box and tubby domain containing protein, expressed	chr1	31926090	31928961	-	three_prime_UTR
3	LOC_Os01g13280	ubiquitin conjugating enzyme protein, putative, expressed	gene	ubiquitin conjugating enzyme protein, putative, expressed	chr1	7403888	7408640	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g07860	cystathionine gamma-synthase, putative, expressed	gene	cystathionine gamma-synthase, putative, expressed	chr6	3822022	3826412	+	CDS
3	LOC_Os01g52720	Complex I intermediate-associated protein 30 domain containing protein, putative, expressed	gene	Complex I intermediate-associated protein 30 domain containing protein, putative, expressed	chr1	30319702	30322949	+	CDS
3	LOC_Os06g46366	zinc finger, C3HC4 type, domain containing protein, expressed	gene	zinc finger, C3HC4 type, domain containing protein, expressed	chr6	28132803	28137105	+	CDS,three_prime_UTR
3	LOC_Os05g14590	MCM6 - Putative minichromosome maintenance MCM complex subunit 6, expressed	gene	MCM6 - Putative minichromosome maintenance MCM complex subunit 6, expressed	chr5	8312835	8319327	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g15040	S-adenosyl-L-methionine:benzoic acid/salicylic acid carboxyl methyltransferase, putative, expressed	gene	S-adenosyl-L-methionine:benzoic acid/salicylic acid carboxyl methyltransferase, putative, expressed	chr11	8461442	8463964	+	CDS
3	LOC_Os03g33590	interferon-related developmental regulator, putative, expressed	gene	interferon-related developmental regulator, putative, expressed	chr3	19196361	19202850	-	CDS
3	LOC_Os07g31250	OsWAK69 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed	gene	OsWAK69 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed	chr7	18497006	18501820	+	CDS,downstream
3	LOC_Os04g51940	YT521-B, putative, expressed	gene	YT521-B, putative, expressed	chr4	30636007	30640397	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g03190	IQ calmodulin-binding motif domain containing protein, expressed	gene	IQ calmodulin-binding motif domain containing protein, expressed	chr5	1291402	1295526	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g18640	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr12	10763904	10766402	+	CDS,three_prime_UTR
3	LOC_Os03g20460	guanylate kinase, putative, expressed	gene	guanylate kinase, putative, expressed	chr3	11594171	11597778	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g07160	expressed protein	gene	expressed protein	chr6	3427700	3432506	+	CDS
3	LOC_Os06g12030	glutaredoxin domain containing protein, putative, expressed	gene	glutaredoxin domain containing protein, putative, expressed	chr6	6439414	6446607	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g24160	phosphatidylinositol-4-phosphate 5-kinase, putative, expressed	gene	phosphatidylinositol-4-phosphate 5-kinase, putative, expressed	chr3	13710991	13715475	+	CDS,three_prime_UTR
3	LOC_Os07g38110	tic20, putative, expressed	gene	tic20, putative, expressed	chr7	22850363	22852924	-	three_prime_UTR,promoter
3	LOC_Os02g12870	expressed protein	gene	expressed protein	chr2	6790686	6795165	+	three_prime_UTR
3	LOC_Os09g37410	OsSAUR46 - Auxin-responsive SAUR gene family member, expressed	gene	OsSAUR46 - Auxin-responsive SAUR gene family member, expressed	chr9	21589997	21590419	+	CDS,downstream
3	LOC_Os03g20300	glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed	gene	glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed	chr3	11467214	11474501	-	CDS,three_prime_UTR,downstream
3	LOC_Os05g50930	RNA polymerase sigma factor, putative, expressed	gene	RNA polymerase sigma factor, putative, expressed	chr5	29162393	29164978	+	three_prime_UTR
3	LOC_Os03g61730	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr3	34984720	34990600	-	CDS,three_prime_UTR
3	LOC_Os01g67600	CXE carboxylesterase, putative, expressed	gene	CXE carboxylesterase, putative, expressed	chr1	39295883	39298794	-	three_prime_UTR,promoter
3	LOC_Os04g08740	ethylene receptor, putative, expressed	gene	ethylene receptor, putative, expressed	chr4	4733814	4737787	+	CDS,three_prime_UTR
3	LOC_Os07g46820	CUG-BP- and ETR-3-like factor 5, putative, expressed	gene	CUG-BP- and ETR-3-like factor 5, putative, expressed	chr7	27982221	27987007	-	CDS,promoter
3	LOC_Os04g57550	amine oxidase, flavin-containing, domain containing protein, expressed	gene	amine oxidase, flavin-containing, domain containing protein, expressed	chr4	34054700	34058091	-	CDS,downstream
3	LOC_Os06g45800	PAP/25A associated domain containing protein, putative, expressed	gene	PAP/25A associated domain containing protein, putative, expressed	chr6	27708822	27718177	-	CDS,promoter
3	LOC_Os04g49960	glycosyl transferase, group 1 domain containing protein, expressed	gene	glycosyl transferase, group 1 domain containing protein, expressed	chr4	29617921	29620908	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g48020	SNARE domain containing protein, putative, expressed	gene	SNARE domain containing protein, putative, expressed	chr5	27467611	27471177	+	CDS,three_prime_UTR
3	LOC_Os07g14650	expressed protein	gene	expressed protein	chr7	8351089	8353960	+	CDS,three_prime_UTR
3	LOC_Os04g12744	expressed protein	gene	expressed protein	chr4	7039315	7043268	-	CDS
3	LOC_Os07g15880	mitochondrial prohibitin complex protein 2, putative, expressed	gene	mitochondrial prohibitin complex protein 2, putative, expressed	chr7	9220394	9226216	-	CDS,three_prime_UTR
3	LOC_Os08g31240	FACT complex subunit SPT16, putative, expressed	gene	FACT complex subunit SPT16, putative, expressed	chr8	19312065	19315518	+	CDS
3	LOC_Os03g45990	expressed protein	gene	expressed protein	chr3	25997723	26002587	+	five_prime_UTR,CDS,downstream
3	LOC_Os01g73070	expressed protein	gene	expressed protein	chr1	42391140	42394692	+	CDS,three_prime_UTR
3	LOC_Os03g12010	expressed protein	gene	expressed protein	chr3	6289728	6294363	+	five_prime_UTR,CDS
3	LOC_Os11g06900	amidase family protein, putative, expressed	gene	amidase family protein, putative, expressed	chr11	3378287	3384895	-	CDS,three_prime_UTR,downstream
3	LOC_Os06g20060	expressed protein	gene	expressed protein	chr6	11503386	11506370	-	CDS,promoter
3	LOC_Os03g20780	ethylene-insensitive 3, putative	gene	ethylene-insensitive 3, putative	chr3	11769979	11771910	+	CDS,downstream
3	LOC_Os12g12850	ATP-dependent Clp protease ATP-binding subunit clpA homolog,chloroplast precursor, putative, expressed	gene	ATP-dependent Clp protease ATP-binding subunit clpA homolog,chloroplast precursor, putative, expressed	chr12	7094687	7100504	-	CDS
3	LOC_Os03g31300	chaperone protein clpB 1, putative, expressed	gene	chaperone protein clpB 1, putative, expressed	chr3	17830984	17838104	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g04400	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr3	2017672	2021076	-	CDS
3	LOC_Os02g40340	expressed protein	gene	expressed protein	chr2	24426182	24429328	-	five_prime_UTR,CDS
3	LOC_Os07g23244	ribosomal protein L23 family protein, putative, expressed	gene	ribosomal protein L23 family protein, putative, expressed	chr7	13097617	13102797	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g51560	CK1_CaseinKinase_1.8 - CK1 includes the casein kinase 1 kinases, expressed	gene	CK1_CaseinKinase_1.8 - CK1 includes the casein kinase 1 kinases, expressed	chr5	29508496	29513367	-	CDS,three_prime_UTR
3	LOC_Os07g08190	cyclophilin, putative, expressed	gene	cyclophilin, putative, expressed	chr7	4174433	4180650	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g30210	NBS-LRR type disease resistance protein, putative	gene	NBS-LRR type disease resistance protein, putative	chr11	17095202	17099033	-	CDS,promoter
3	LOC_Os01g61200	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr1	35414663	35416541	-	CDS,promoter
3	LOC_Os04g01980	receptor protein kinase, putative, expressed	gene	receptor protein kinase, putative, expressed	chr4	609122	611879	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g67530	AMP-binding enzyme, putative, expressed	gene	AMP-binding enzyme, putative, expressed	chr1	39251940	39255710	+	three_prime_UTR
3	LOC_Os11g48050	expressed protein	gene	expressed protein	chr11	28442096	28443918	-	three_prime_UTR,promoter
3	LOC_Os01g05530	expressed protein	gene	expressed protein	chr1	2631554	2637081	+	CDS,three_prime_UTR
3	LOC_Os08g43120	Plant PDR ABC transporter associated domain containing protein, expressed	gene	Plant PDR ABC transporter associated domain containing protein, expressed	chr8	27265369	27274826	+	CDS
3	LOC_Os12g03970	CAMK_CAMK_like.44 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.44 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr12	1647300	1649655	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g34400	hypothetical protein	gene	hypothetical protein	chr12	20816565	20817807	+	CDS,promoter,downstream
3	LOC_Os02g12740	GPI-anchor transamidase precursor, putative, expressed	gene	GPI-anchor transamidase precursor, putative, expressed	chr2	6668822	6672950	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g37380	glucose-6-phosphate isomerase, putative, expressed	gene	glucose-6-phosphate isomerase, putative, expressed	chr8	23620366	23625843	-	CDS,three_prime_UTR
3	LOC_Os04g52180	expressed protein	gene	expressed protein	chr4	30814998	30816866	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g05950	TOC159, putative, expressed	gene	TOC159, putative, expressed	chr5	2973662	2978027	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g01500	outer membrane protein, OMP85 family, putative, expressed	gene	outer membrane protein, OMP85 family, putative, expressed	chr12	300963	304271	-	CDS,three_prime_UTR
3	LOC_Os03g13480	cyclin-J18-like, putative	gene	cyclin-J18-like, putative	chr3	7289992	7292185	-	CDS,promoter
3	LOC_Os01g51770	outer mitochondrial membrane porin, putative, expressed	gene	outer mitochondrial membrane porin, putative, expressed	chr1	29769137	29772316	-	three_prime_UTR,promoter
3	LOC_Os04g58320	zinc finger, RING-type, putative, expressed	gene	zinc finger, RING-type, putative, expressed	chr4	34529609	34532171	+	three_prime_UTR,downstream
3	LOC_Os11g06170	bZIP transcriptional activator RSG, putative, expressed	gene	bZIP transcriptional activator RSG, putative, expressed	chr11	2935176	2938738	+	three_prime_UTR,CDS
3	LOC_Os02g03600	dnaJ domain containing protein, expressed	gene	dnaJ domain containing protein, expressed	chr2	1468977	1474710	-	CDS
3	LOC_Os03g06880	kinase, pfkB family, putative, expressed	gene	kinase, pfkB family, putative, expressed	chr3	3478407	3481216	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g38930	tRNA-splicing endonuclease subunit Sen2, putative, expressed	gene	tRNA-splicing endonuclease subunit Sen2, putative, expressed	chr11	22710475	22712727	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os04g31924	nodulin, putative, expressed	gene	nodulin, putative, expressed	chr4	18950602	18955117	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g46090	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	27509012	27513315	+	CDS,downstream
3	LOC_Os02g09890	protein kinase PKN/PRK1, effector, putative, expressed	gene	protein kinase PKN/PRK1, effector, putative, expressed	chr2	5118281	5121949	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os12g06610	nucleolar complex protein 2, putative, expressed	gene	nucleolar complex protein 2, putative, expressed	chr12	3200618	3206797	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g54474	transcription factor, putative, expressed	gene	transcription factor, putative, expressed	chr4	32218227	32226956	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g45850	OTU-like cysteine protease family protein, putative, expressed	gene	OTU-like cysteine protease family protein, putative, expressed	chr6	27742193	27746121	+	CDS,three_prime_UTR
3	LOC_Os12g31490	expressed protein	gene	expressed protein	chr12	18910149	18915235	-	CDS
3	LOC_Os10g31770	START domain containing protein, expressed	gene	START domain containing protein, expressed	chr10	16580513	16589324	+	CDS,three_prime_UTR
3	LOC_Os03g61130	phosphoesterase family protein, putative, expressed	gene	phosphoesterase family protein, putative, expressed	chr3	34717190	34720180	+	three_prime_UTR,downstream
3	LOC_Os04g33780	OTU-like cysteine protease family protein, putative, expressed	gene	OTU-like cysteine protease family protein, putative, expressed	chr4	20285965	20291159	+	CDS
3	LOC_Os09g26540	expressed protein	gene	expressed protein	chr9	16037841	16044466	-	CDS
3	LOC_Os01g38620	3-5 exonuclease/ nucleic acid binding protein, putative, expressed	gene	3-5 exonuclease/ nucleic acid binding protein, putative, expressed	chr1	21697904	21703165	-	CDS
3	LOC_Os03g60910	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr3	34602631	34607324	-	CDS,three_prime_UTR
3	LOC_Os02g31230	expressed protein	gene	expressed protein	chr2	18708217	18712077	-	three_prime_UTR
3	LOC_Os06g32580	transposon protein, putative, CACTA, En/Spm sub-class	gene	transposon protein, putative, CACTA, En/Spm sub-class	chr6	18950377	18951739	-	CDS
3	LOC_Os03g62090	CESA5 - cellulose synthase, expressed	gene	CESA5 - cellulose synthase, expressed	chr3	35170441	35176292	+	CDS,three_prime_UTR
3	LOC_Os01g19490	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr1	11063670	11067750	-	CDS
3	LOC_Os04g28260	Kinesin motor domain domain containing protein, expressed	gene	Kinesin motor domain domain containing protein, expressed	chr4	16527028	16535525	+	three_prime_UTR,downstream
3	LOC_Os05g01900	expressed protein	gene	expressed protein	chr5	514110	516038	+	CDS,downstream
3	LOC_Os04g47550	expressed protein	gene	expressed protein	chr4	28012453	28014969	+	CDS
3	LOC_Os11g32110	auxin response factor, putative, expressed	gene	auxin response factor, putative, expressed	chr11	18468814	18475403	-	CDS,three_prime_UTR
3	LOC_Os07g32560	ATP-dependent protease, putative, expressed	gene	ATP-dependent protease, putative, expressed	chr7	19404570	19406074	-	three_prime_UTR,promoter
3	LOC_Os06g45280	protein kinase APK1B, chloroplast precursor, putative, expressed	gene	protein kinase APK1B, chloroplast precursor, putative, expressed	chr6	27362819	27368248	-	CDS
3	LOC_Os07g49040	protein phosphotase protein, putative, expressed	gene	protein phosphotase protein, putative, expressed	chr7	29362660	29369490	+	CDS,three_prime_UTR
3	LOC_Os06g04820	leucine carboxyl methyltransferase 1, putative, expressed	gene	leucine carboxyl methyltransferase 1, putative, expressed	chr6	2099055	2104395	-	CDS,three_prime_UTR,downstream
3	LOC_Os04g21710	expressed protein	gene	expressed protein	chr4	12269862	12272352	-	CDS,three_prime_UTR
3	LOC_Os10g15164	expressed protein	gene	expressed protein	chr10	7969224	7973666	-	CDS,three_prime_UTR
3	LOC_Os01g58470	expressed protein	gene	expressed protein	chr1	33802110	33804349	+	CDS,three_prime_UTR
3	LOC_Os01g54480	serine/threonine protein kinase, putative, expressed	gene	serine/threonine protein kinase, putative, expressed	chr1	31331820	31336117	-	CDS,three_prime_UTR
3	LOC_Os07g44330	kinase, putative, expressed	gene	kinase, putative, expressed	chr7	26480252	26484320	-	CDS
3	LOC_Os04g42700	receptor-like protein kinase precursor, putative, expressed	gene	receptor-like protein kinase precursor, putative, expressed	chr4	25068451	25073286	-	CDS
3	LOC_Os07g44660	FGGY family of carbohydrate kinases, putative, expressed	gene	FGGY family of carbohydrate kinases, putative, expressed	chr7	26639633	26644545	+	CDS,promoter
3	LOC_Os06g46880	surp module family protein, putative, expressed	gene	surp module family protein, putative, expressed	chr6	28451965	28455731	-	CDS,three_prime_UTR,downstream
3	LOC_Os11g48030	skp1 family, tetramerisation domain containing protein, expressed	gene	skp1 family, tetramerisation domain containing protein, expressed	chr11	28434679	28437876	-	CDS,three_prime_UTR
3	LOC_Os07g48130	potassium transporter, putative, expressed	gene	potassium transporter, putative, expressed	chr7	28740526	28746067	-	CDS
3	LOC_Os08g45150	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr8	28343659	28346079	+	three_prime_UTR,promoter,downstream
3	LOC_Os02g44570	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr2	27004559	27009982	+	CDS
3	LOC_Os01g18850	OsSPL1 - SBP-box gene family member, expressed	gene	OsSPL1 - SBP-box gene family member, expressed	chr1	10649115	10655755	+	CDS
3	LOC_Os02g26300	expressed protein	gene	expressed protein	chr2	15441341	15445925	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g10390	cleavage and polyadenylation specificity factor, putative, expressed	gene	cleavage and polyadenylation specificity factor, putative, expressed	chr7	5566572	5575615	-	CDS,three_prime_UTR
3	LOC_Os01g64190	expressed protein	gene	expressed protein	chr1	37277948	37279448	-	three_prime_UTR,promoter
3	LOC_Os06g41020	DUF1680 domain containing protein, putative, expressed	gene	DUF1680 domain containing protein, putative, expressed	chr6	24494063	24499974	-	CDS,promoter
3	LOC_Os04g58240	expressed protein	gene	expressed protein	chr4	34492384	34496830	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g50220	pex14, putative, expressed	gene	pex14, putative, expressed	chr5	28717410	28720168	+	CDS,three_prime_UTR
3	LOC_Os09g38370	signal peptidase complex subunit 3, putative, expressed	gene	signal peptidase complex subunit 3, putative, expressed	chr9	22091683	22094820	-	CDS,three_prime_UTR
3	LOC_Os04g43150	nuclear transport factor 2, putative, expressed	gene	nuclear transport factor 2, putative, expressed	chr4	25358184	25364453	+	CDS,three_prime_UTR
3	LOC_Os03g20700	magnesium-chelatase, putative, expressed	gene	magnesium-chelatase, putative, expressed	chr3	11710887	11718849	+	CDS
3	LOC_Os01g59500	U3 small nucleolar RNA-associated protein 11, putative, expressed	gene	U3 small nucleolar RNA-associated protein 11, putative, expressed	chr1	34408183	34411539	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g07000	syntaxin, putative, expressed	gene	syntaxin, putative, expressed	chr7	3445344	3449354	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g52900	ABC transporter family protein, putative, expressed	gene	ABC transporter family protein, putative, expressed	chr4	31317839	31329207	-	CDS,three_prime_UTR
3	LOC_Os03g53760	ATP-dependent RNA helicase DHX36, putative, expressed	gene	ATP-dependent RNA helicase DHX36, putative, expressed	chr3	30808487	30815477	-	CDS
3	LOC_Os01g52730	DUF584 domain containing protein, putative, expressed	gene	DUF584 domain containing protein, putative, expressed	chr1	30321705	30324041	-	three_prime_UTR
3	LOC_Os09g37230	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr9	21487652	21494927	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g48940	uncharacterized mscS family protein, putative, expressed	gene	uncharacterized mscS family protein, putative, expressed	chr4	29001913	29008442	+	CDS,three_prime_UTR
3	LOC_Os10g42110	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr10	22578483	22582741	+	CDS
3	LOC_Os03g62110	nicotinate phosphoribosyltransferase family domain containing protein, expressed	gene	nicotinate phosphoribosyltransferase family domain containing protein, expressed	chr3	35183664	35190433	+	CDS
3	LOC_Os03g05812	expressed protein	gene	expressed protein	chr3	2906104	2911668	+	CDS,three_prime_UTR,promoter
3	LOC_Os09g24240	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr9	14389144	14391933	-	CDS,promoter
3	LOC_Os02g26650	delta14-sterol reductase, putative, expressed	gene	delta14-sterol reductase, putative, expressed	chr2	15635392	15641511	-	CDS,three_prime_UTR
3	LOC_Os04g59040	soluble inorganic pyrophosphatase, putative, expressed	gene	soluble inorganic pyrophosphatase, putative, expressed	chr4	34935566	34939012	-	CDS,three_prime_UTR
3	LOC_Os03g50120	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr3	28581668	28586751	+	CDS,downstream
3	LOC_Os03g58090	expressed protein	gene	expressed protein	chr3	33064586	33067463	-	CDS,three_prime_UTR
3	LOC_Os02g33310	OsFBD7 - F-box and FBD domain containing protein	gene	OsFBD7 - F-box and FBD domain containing protein	chr2	19783277	19785110	+	CDS,promoter
3	LOC_Os05g51140	expressed protein	gene	expressed protein	chr5	29273463	29277863	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g33610	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr7	20076855	20080628	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g10400	hypothetical protein	gene	hypothetical protein	chr10	5730870	5732551	-	CDS,downstream
3	LOC_Os06g51330	expressed protein	gene	expressed protein	chr6	31082108	31088545	-	CDS,downstream
3	LOC_Os03g16430	RNA polymerase sigma factor, putative, expressed	gene	RNA polymerase sigma factor, putative, expressed	chr3	9063792	9067014	+	CDS,three_prime_UTR
3	LOC_Os12g01880	expressed protein	gene	expressed protein	chr12	514426	516055	+	three_prime_UTR,downstream
3	LOC_Os09g36060	endoglucanase, putative, expressed	gene	endoglucanase, putative, expressed	chr9	20763721	20768090	+	CDS
3	LOC_Os03g08860	GRAM domain containing protein, expressed	gene	GRAM domain containing protein, expressed	chr3	4591491	4593913	+	three_prime_UTR,CDS,downstream
3	LOC_Os07g33340	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr7	19925101	19931001	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g06500	DSHCT domain containing protein, expressed	gene	DSHCT domain containing protein, expressed	chr2	3237584	3249730	-	CDS,three_prime_UTR
3	LOC_Os10g04610	OsFBX360 - F-box domain containing protein, expressed	gene	OsFBX360 - F-box domain containing protein, expressed	chr10	2195536	2197944	+	three_prime_UTR,promoter,downstream
3	LOC_Os02g13970	Complex I intermediate-associated protein 30 domain containing protein, putative, expressed	gene	Complex I intermediate-associated protein 30 domain containing protein, putative, expressed	chr2	7621905	7627260	+	CDS,three_prime_UTR,promoter
3	LOC_Os10g28710	expressed protein	gene	expressed protein	chr10	14912133	14915001	-	three_prime_UTR,promoter
3	LOC_Os03g59470	stage II sporulation protein E, putative, expressed	gene	stage II sporulation protein E, putative, expressed	chr3	33838649	33842717	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g09750	RNA methyltransferase protein, putative, expressed	gene	RNA methyltransferase protein, putative, expressed	chr1	5020088	5024720	-	CDS,three_prime_UTR
3	LOC_Os12g40540	FAD dependent oxidoreductase, putative, expressed	gene	FAD dependent oxidoreductase, putative, expressed	chr12	25048998	25052473	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os10g04120	powdery mildew resistance protein PM3b, putative	gene	powdery mildew resistance protein PM3b, putative	chr10	1903348	1908293	-	CDS,promoter,downstream
3	LOC_Os08g10480	heavy metal-associated domain containing protein	gene	heavy metal-associated domain containing protein	chr8	6158196	6160151	+	CDS,promoter
3	LOC_Os06g43160	exostosin family domain containing protein	gene	exostosin family domain containing protein	chr6	25940643	25942656	+	CDS,downstream
3	LOC_Os10g33140	hcrVf2 protein, putative, expressed	gene	hcrVf2 protein, putative, expressed	chr10	17293797	17295606	-	three_prime_UTR
3	LOC_Os09g34000	expressed protein	gene	expressed protein	chr9	20073329	20076326	+	three_prime_UTR,CDS,promoter
3	LOC_Os09g32960	expressed protein	gene	expressed protein	chr9	19670809	19673091	+	three_prime_UTR
3	LOC_Os03g10060	S10/S20 domain containing ribosomal protein, putative, expressed	gene	S10/S20 domain containing ribosomal protein, putative, expressed	chr3	5077138	5080712	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g18630	aspartic proteinase oryzasin-1 precursor, putative, expressed	gene	aspartic proteinase oryzasin-1 precursor, putative, expressed	chr1	10491015	10494699	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g29610	hypothetical protein	gene	hypothetical protein	chr1	16589492	16596433	+	CDS
3	LOC_Os02g55870	heparanase-like protein precursor, putative, expressed	gene	heparanase-like protein precursor, putative, expressed	chr2	34193550	34197836	+	CDS,three_prime_UTR
3	LOC_Os02g09420	cyclase family protein, putative, expressed	gene	cyclase family protein, putative, expressed	chr2	4831143	4835213	+	CDS,three_prime_UTR
3	LOC_Os08g42290	expressed protein	gene	expressed protein	chr8	26694130	26696641	+	CDS
3	LOC_Os01g67540	AMP-binding domain containing protein, expressed	gene	AMP-binding domain containing protein, expressed	chr1	39256795	39260319	+	CDS,promoter
3	LOC_Os02g01520	IQ calmodulin-binding motif family protein, putative, expressed	gene	IQ calmodulin-binding motif family protein, putative, expressed	chr2	299744	302823	+	CDS,three_prime_UTR,promoter
3	LOC_Os06g40620	SNF7 domain containing protein, putative, expressed	gene	SNF7 domain containing protein, putative, expressed	chr6	24217364	24222378	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g70320	expressed protein	gene	expressed protein	chr1	40722342	40729464	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g13050	peroxidase family protein, expressed	gene	peroxidase family protein, expressed	chr6	7147962	7157823	-	CDS,promoter,downstream
3	LOC_Os01g41770	leucine rich repeat protein, putative, expressed	gene	leucine rich repeat protein, putative, expressed	chr1	23638610	23641836	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g13160	expressed protein	gene	expressed protein	chr1	7332691	7338244	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g07910	nitrilase, putative, expressed	gene	nitrilase, putative, expressed	chr3	4023332	4027524	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g02810	CCAAT/enhancer-binding protein, putative, expressed	gene	CCAAT/enhancer-binding protein, putative, expressed	chr9	1297966	1311563	+	CDS
3	LOC_Os10g32060	retrotransposon protein, putative, Ty3-gypsy subclass, expressed	gene	retrotransposon protein, putative, Ty3-gypsy subclass, expressed	chr10	16768767	16774566	+	CDS,three_prime_UTR
3	LOC_Os03g20290	aspartic proteinase nepenthesin-1 precursor, putative, expressed	gene	aspartic proteinase nepenthesin-1 precursor, putative, expressed	chr3	11466354	11468028	+	three_prime_UTR,downstream
3	LOC_Os08g42020	zinc ion binding protein, putative, expressed	gene	zinc ion binding protein, putative, expressed	chr8	26540506	26543072	+	three_prime_UTR,promoter,downstream
3	LOC_Os01g10350	MPPN domain containing protein, expressed	gene	MPPN domain containing protein, expressed	chr1	5441857	5445266	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g65200	proton-dependent oligopeptide transport, putative, expressed	gene	proton-dependent oligopeptide transport, putative, expressed	chr1	37833134	37835883	+	CDS,three_prime_UTR
3	LOC_Os01g03730	nuclease PA3, putative, expressed	gene	nuclease PA3, putative, expressed	chr1	1565138	1568472	+	CDS,three_prime_UTR
3	LOC_Os04g38640	OsDegp5 - Putative Deg protease homologue, expressed	gene	OsDegp5 - Putative Deg protease homologue, expressed	chr4	22769737	22775352	+	CDS
3	LOC_Os11g01330	expressed protein	gene	expressed protein	chr11	193178	198481	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g03320	plant neutral invertase domain containing protein, expressed	gene	plant neutral invertase domain containing protein, expressed	chr2	1341178	1344290	+	five_prime_UTR,CDS,promoter,downstream
3	LOC_Os07g37630	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr7	22559504	22563706	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g22380	short chain dehydrogenase/reductase protein, putative, expressed	gene	short chain dehydrogenase/reductase protein, putative, expressed	chr4	12652670	12659086	+	CDS
3	LOC_Os03g40020	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr3	22231775	22237401	-	three_prime_UTR
3	LOC_Os01g73140	ubiquitin-fold modifier 1 precursor, putative, expressed	gene	ubiquitin-fold modifier 1 precursor, putative, expressed	chr1	42418120	42420335	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os12g32250	WRKY DNA-binding domain containing protein, expressed	gene	WRKY DNA-binding domain containing protein, expressed	chr12	19445198	19450076	+	CDS,three_prime_UTR
3	LOC_Os09g37012	eukaryotic aspartyl protease domain containing protein, expressed	gene	eukaryotic aspartyl protease domain containing protein, expressed	chr9	21346754	21350425	-	CDS,three_prime_UTR
3	LOC_Os09g30130	CSLE6 - cellulose synthase-like family E, expressed	gene	CSLE6 - cellulose synthase-like family E, expressed	chr9	18314153	18320213	-	CDS
3	LOC_Os07g35690	TKL_IRAK_DUF26-lc.3 - DUF26 kinases have homology to DUF26 containing loci, expressed	gene	TKL_IRAK_DUF26-lc.3 - DUF26 kinases have homology to DUF26 containing loci, expressed	chr7	21377097	21380280	+	CDS
3	LOC_Os04g10420	CW7, putative, expressed	gene	CW7, putative, expressed	chr4	5651287	5661938	-	CDS
3	LOC_Os12g14140	expressed protein	gene	expressed protein	chr12	8022558	8024819	+	five_prime_UTR,CDS
3	LOC_Os11g11060	GHMP kinases ATP-binding protein, putative, expressed	gene	GHMP kinases ATP-binding protein, putative, expressed	chr11	6106137	6108942	+	CDS
3	LOC_Os01g59130	proline-rich family protein, putative, expressed	gene	proline-rich family protein, putative, expressed	chr1	34152286	34159095	-	CDS,three_prime_UTR
3	LOC_Os12g10510	expressed protein	gene	expressed protein	chr12	5567824	5573080	+	three_prime_UTR
3	LOC_Os08g28680	ubiquitin-conjugating enzyme, putative, expressed	gene	ubiquitin-conjugating enzyme, putative, expressed	chr8	17510292	17513387	-	CDS,three_prime_UTR
3	LOC_Os02g12290	nuclear ribonuclease Z, putative	gene	nuclear ribonuclease Z, putative	chr2	6397342	6399236	+	CDS
3	LOC_Os04g21580	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr4	12196119	12201777	-	CDS
3	LOC_Os03g05340	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr3	2609036	2617993	-	CDS,downstream
3	LOC_Os09g37240	glutathione S-transferase, C-terminal domain containing protein, expressed	gene	glutathione S-transferase, C-terminal domain containing protein, expressed	chr9	21496134	21514636	+	CDS,three_prime_UTR,promoter
3	LOC_Os12g13150	expressed protein	gene	expressed protein	chr12	7313271	7324932	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g09170	expressed protein	gene	expressed protein	chr8	5313680	5317146	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g45070	PINHEAD, putative, expressed	gene	PINHEAD, putative, expressed	chr2	27324275	27335967	-	CDS
3	LOC_Os07g47700	NAD dependent epimerase/dehydratase family domain containing protein, expressed	gene	NAD dependent epimerase/dehydratase family domain containing protein, expressed	chr7	28493723	28497134	+	CDS
3	LOC_Os11g02240	CAMK_KIN1/SNF1/Nim1_like.4 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_KIN1/SNF1/Nim1_like.4 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr11	629583	632698	-	CDS
3	LOC_Os03g40170	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr3	22330751	22333583	+	CDS
3	LOC_Os11g37850	stripe rust resistance protein Yr10, putative, expressed	gene	stripe rust resistance protein Yr10, putative, expressed	chr11	21953139	21958739	+	CDS
3	LOC_Os09g39420	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr9	22665825	22670911	+	CDS,three_prime_UTR
3	LOC_Os02g25080	expressed protein	gene	expressed protein	chr2	14551212	14553253	+	CDS,three_prime_UTR
3	LOC_Os07g08950	FAD-linked oxidoreductase protein, putative, expressed	gene	FAD-linked oxidoreductase protein, putative, expressed	chr7	4651794	4659424	+	CDS,three_prime_UTR,promoter
3	LOC_Os11g07470	expressed protein	gene	expressed protein	chr11	3777972	3785047	-	CDS
3	LOC_Os01g07090	5-azacytidine resistance protein azr1, putative, expressed	gene	5-azacytidine resistance protein azr1, putative, expressed	chr1	3331952	3335075	-	CDS,three_prime_UTR
3	LOC_Os09g24990	CAF1 family ribonuclease containing protein, putative, expressed	gene	CAF1 family ribonuclease containing protein, putative, expressed	chr9	14928155	14931396	+	three_prime_UTR,downstream
3	LOC_Os06g36890	glycosyl transferase, group 1 domain containing protein	gene	glycosyl transferase, group 1 domain containing protein	chr6	21734128	21738841	-	CDS
3	LOC_Os04g56740	IQ calmodulin-binding motif family protein, putative, expressed	gene	IQ calmodulin-binding motif family protein, putative, expressed	chr4	33654902	33660829	+	CDS,three_prime_UTR
3	LOC_Os03g15750	ASC1, putative, expressed	gene	ASC1, putative, expressed	chr3	8682491	8686566	-	three_prime_UTR,promoter
3	LOC_Os05g45300	enoyl-CoA hydratase/isomerase family protein, putative, expressed	gene	enoyl-CoA hydratase/isomerase family protein, putative, expressed	chr5	26223128	26225793	-	three_prime_UTR,downstream
3	LOC_Os03g07200	expressed protein	gene	expressed protein	chr3	3681877	3684306	-	three_prime_UTR,promoter
3	LOC_Os03g17690	OsAPx1 - Cytosolic Ascorbate Peroxidase encoding gene 1-8, expressed	gene	OsAPx1 - Cytosolic Ascorbate Peroxidase encoding gene 1-8, expressed	chr3	9842263	9845683	+	CDS
3	LOC_Os06g12630	glutathione S-transferase, N-terminal domain containing protein, expressed	gene	glutathione S-transferase, N-terminal domain containing protein, expressed	chr6	6889586	6894645	-	CDS,three_prime_UTR
3	LOC_Os04g23180	cation efflux family protein, putative, expressed	gene	cation efflux family protein, putative, expressed	chr4	13167450	13173774	-	CDS,three_prime_UTR
3	LOC_Os06g49740	pre-mRNA-splicing factor syf2, putative, expressed	gene	pre-mRNA-splicing factor syf2, putative, expressed	chr6	30086160	30088574	+	CDS,three_prime_UTR
3	LOC_Os03g60740	expressed protein	gene	expressed protein	chr3	34519351	34521972	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g57950	dihydroorotate dihydrogenase protein, putative, expressed	gene	dihydroorotate dihydrogenase protein, putative, expressed	chr4	34334457	34338472	+	CDS
3	LOC_Os10g08754	hypothetical protein	gene	hypothetical protein	chr10	4760887	4763977	+	three_prime_UTR
3	LOC_Os05g01170	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr5	137162	140498	-	CDS,downstream
3	LOC_Os01g18320	protoporphyrinogen oxidase, chloroplast precursor, putative, expressed	gene	protoporphyrinogen oxidase, chloroplast precursor, putative, expressed	chr1	10290865	10294512	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g02220	retrotransposon protein, putative, SINE subclass	gene	retrotransposon protein, putative, SINE subclass	chr11	622812	623552	-	CDS,promoter
3	LOC_Os01g66110	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr1	38385224	38390737	-	CDS
3	LOC_Os07g28260	expressed protein	gene	expressed protein	chr7	16511382	16520877	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g36720	RGH1A, putative, expressed	gene	RGH1A, putative, expressed	chr12	22453776	22458841	-	CDS,three_prime_UTR
3	LOC_Os06g13860	RCD1, putative, expressed	gene	RCD1, putative, expressed	chr6	7697402	7702821	+	CDS,three_prime_UTR
3	LOC_Os04g41850	NIN, putative, expressed	gene	NIN, putative, expressed	chr4	24610521	24616988	+	CDS
3	LOC_Os02g17970	AGC_PKA/PKG_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed	gene	AGC_PKA/PKG_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed	chr2	10419060	10428058	+	CDS
3	LOC_Os08g08200	mRNA cap guanine-N7 methyltransferase 1, putative, expressed	gene	mRNA cap guanine-N7 methyltransferase 1, putative, expressed	chr8	4675289	4679504	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g48116	expressed protein	gene	expressed protein	chr2	29452225	29455248	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g01480	nucleic acid binding protein, putative, expressed	gene	nucleic acid binding protein, putative, expressed	chr2	274428	277257	+	CDS
3	LOC_Os01g07212	staphylococcal nuclease homologue, putative, expressed	gene	staphylococcal nuclease homologue, putative, expressed	chr1	3400288	3406358	+	CDS,promoter
3	LOC_Os07g42950	40S ribosomal protein S6, putative, expressed	gene	40S ribosomal protein S6, putative, expressed	chr7	25721886	25724594	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os08g42000	nuclear transport factor, putative, expressed	gene	nuclear transport factor, putative, expressed	chr8	26532343	26534675	-	three_prime_UTR,promoter
3	LOC_Os02g30974	expressed protein	gene	expressed protein	chr2	18495334	18503763	-	CDS
3	LOC_Os07g42895	hypothetical protein	gene	hypothetical protein	chr7	25679839	25680749	-	CDS,promoter,downstream
3	LOC_Os05g45890	tRNAHis guanylyltransferase family protein, expressed	gene	tRNAHis guanylyltransferase family protein, expressed	chr5	26529131	26533846	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g38850	prenyltransferase, putative	gene	prenyltransferase, putative	chr7	23301626	23307985	+	CDS,downstream
3	LOC_Os12g43550	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr12	26988371	26992428	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g54350	expressed protein	gene	expressed protein	chr2	33313919	33314589	-	CDS,downstream
3	LOC_Os03g40690	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr3	22622645	22626973	+	CDS,downstream
3	LOC_Os12g32580	expressed protein	gene	expressed protein	chr12	19628372	19631992	-	CDS,three_prime_UTR
3	LOC_Os05g27530	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr5	15961705	15966230	-	CDS,three_prime_UTR
3	LOC_Os03g56840	GTP-binding protein, putative, expressed	gene	GTP-binding protein, putative, expressed	chr3	32377684	32381103	-	CDS,three_prime_UTR
3	LOC_Os12g38430	SR repressor protein, putative, expressed	gene	SR repressor protein, putative, expressed	chr12	23556090	23559945	-	CDS,three_prime_UTR
3	LOC_Os04g22720	expressed protein	gene	expressed protein	chr4	12865936	12873526	+	CDS,three_prime_UTR
3	LOC_Os02g49980	ADP-ribosylation factor, putative, expressed	gene	ADP-ribosylation factor, putative, expressed	chr2	30527552	30530510	-	CDS,three_prime_UTR
3	LOC_Os01g71540	expressed protein	gene	expressed protein	chr1	41438252	41446481	+	CDS,three_prime_UTR
3	LOC_Os03g44300	transketolase, putative, expressed	gene	transketolase, putative, expressed	chr3	24900413	24903573	+	CDS,downstream
3	LOC_Os11g44580	go35 NBS-LRR, putative, expressed	gene	go35 NBS-LRR, putative, expressed	chr11	26481538	26483982	-	CDS,downstream
3	LOC_Os01g46169	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr1	26248342	26273140	+	CDS
3	LOC_Os04g58580	phosphomannomutase, putative, expressed	gene	phosphomannomutase, putative, expressed	chr4	34643141	34646173	+	three_prime_UTR,CDS
3	LOC_Os04g38880	dynein light chain type 1 domain containing protein, expressed	gene	dynein light chain type 1 domain containing protein, expressed	chr4	22922978	22925590	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g01140	MBTB12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed	gene	MBTB12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed	chr7	81397	84934	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g16600	expressed protein	gene	expressed protein	chr2	9486435	9494273	+	CDS,three_prime_UTR
3	LOC_Os08g31840	TBC domain containing protein, expressed	gene	TBC domain containing protein, expressed	chr8	19736918	19741786	-	three_prime_UTR,CDS,promoter
3	LOC_Os07g04550	pleckstrin homology domain-containing protein, putative, expressed	gene	pleckstrin homology domain-containing protein, putative, expressed	chr7	2006648	2012147	+	CDS,three_prime_UTR,promoter
3	LOC_Os04g01970	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed	gene	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed	chr4	601300	607879	+	CDS,three_prime_UTR
3	LOC_Os06g44880	type II intron maturase protein, putative	gene	type II intron maturase protein, putative	chr6	27125263	27129159	-	CDS,promoter
3	LOC_Os11g44880	kinesin-4, putative, expressed	gene	kinesin-4, putative, expressed	chr11	26687156	26693766	-	CDS,promoter
3	LOC_Os09g15770	CPuORF13 - conserved peptide uORF-containing transcript, expressed	gene	CPuORF13 - conserved peptide uORF-containing transcript, expressed	chr9	9633450	9637120	+	CDS,three_prime_UTR
3	LOC_Os03g23935	WD domain, G-beta repeat domain containing protein	gene	WD domain, G-beta repeat domain containing protein	chr3	13579861	13583177	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g38490	growth regulator related protein, putative	gene	growth regulator related protein, putative	chr5	22517779	22523885	+	CDS
3	LOC_Os03g49520	pinin/SDK/memA protein, putative, expressed	gene	pinin/SDK/memA protein, putative, expressed	chr3	28179255	28183169	-	three_prime_UTR,CDS,promoter
3	LOC_Os11g05552	signal recognition particle 54 kDa protein, chloroplast precursor, putative, expressed	gene	signal recognition particle 54 kDa protein, chloroplast precursor, putative, expressed	chr11	2508287	2513123	+	three_prime_UTR
3	LOC_Os01g18670	MDR-like ABC transporter, putative, expressed	gene	MDR-like ABC transporter, putative, expressed	chr1	10514699	10520258	-	CDS
3	LOC_Os05g23530	expressed protein	gene	expressed protein	chr5	13418300	13434680	+	CDS,three_prime_UTR
3	LOC_Os06g50490	expressed protein	gene	expressed protein	chr6	30567517	30570161	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g32870	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr1	18040713	18049194	+	CDS
3	LOC_Os11g04174	expressed protein	gene	expressed protein	chr11	1693473	1695099	-	three_prime_UTR,promoter,downstream
3	LOC_Os01g69990	GYF domain containing protein, putative, expressed	gene	GYF domain containing protein, putative, expressed	chr1	40482262	40488617	-	CDS
3	LOC_Os05g18524	expressed protein	gene	expressed protein	chr5	10720330	10723699	-	three_prime_UTR,promoter
3	LOC_Os09g10930	gamma response I protein, putative, expressed	gene	gamma response I protein, putative, expressed	chr9	6015388	6019410	+	CDS,three_prime_UTR
3	LOC_Os07g44350	sec20 domain containing protein, expressed	gene	sec20 domain containing protein, expressed	chr7	26500471	26503243	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g19470	WW domain containing protein, expressed	gene	WW domain containing protein, expressed	chr6	11084819	11093275	+	CDS,downstream
3	LOC_Os01g11900	hhH-GPD superfamily base excision DNA repair protein, expressed	gene	hhH-GPD superfamily base excision DNA repair protein, expressed	chr1	6443319	6455076	+	CDS,three_prime_UTR
3	LOC_Os10g39220	tobamovirus multiplication protein, putative, expressed	gene	tobamovirus multiplication protein, putative, expressed	chr10	20865038	20868968	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g48620	4-amino-4-deoxychorismate synthase, putative, expressed	gene	4-amino-4-deoxychorismate synthase, putative, expressed	chr6	29412394	29417994	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g46480	expressed protein	gene	expressed protein	chr6	28225614	28233195	-	CDS
3	LOC_Os11g36190	receptor kinase, putative, expressed	gene	receptor kinase, putative, expressed	chr11	20818733	20823434	-	CDS,three_prime_UTR
3	LOC_Os03g45320	dehydrogenase, putative, expressed	gene	dehydrogenase, putative, expressed	chr3	25584223	25588735	+	three_prime_UTR,CDS,downstream
3	LOC_Os04g53510	OsFBL20 - F-box domain and LRR containing protein, expressed	gene	OsFBL20 - F-box domain and LRR containing protein, expressed	chr4	31690620	31694644	-	three_prime_UTR,downstream
3	LOC_Os05g05980	DNA directed RNA polymerase, 7 kDa subunit domain containing protein	gene	DNA directed RNA polymerase, 7 kDa subunit domain containing protein	chr5	2987100	2991105	+	CDS,downstream
3	LOC_Os05g05440	expressed protein	gene	expressed protein	chr5	2703371	2711899	-	CDS,promoter
3	LOC_Os07g38090	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr7	22839993	22842961	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g17770	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr9	10871550	10877007	-	CDS
3	LOC_Os03g60930	RNA recognition motif containing protein, putative	gene	RNA recognition motif containing protein, putative	chr3	34611127	34618323	+	CDS,promoter,downstream
3	LOC_Os10g28000	glutathione reductase, putative, expressed	gene	glutathione reductase, putative, expressed	chr10	14434475	14437554	-	five_prime_UTR,CDS,downstream
3	LOC_Os07g04480	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr7	1977007	1980460	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os07g36150	formin-like protein 3 precursor, putative, expressed	gene	formin-like protein 3 precursor, putative, expressed	chr7	21593805	21599730	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g45960	OsSub42 - Putative Subtilisin homologue, expressed	gene	OsSub42 - Putative Subtilisin homologue, expressed	chr4	27036564	27041269	+	CDS
3	LOC_Os01g70400	expressed protein	gene	expressed protein	chr1	40784081	40786177	+	three_prime_UTR,downstream
3	LOC_Os02g03410	CAMK_CAMK_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr2	1387873	1394417	+	CDS,downstream
3	LOC_Os06g28060	ATP-binding region, ATPase-like domain containing protein, expressed	gene	ATP-binding region, ATPase-like domain containing protein, expressed	chr6	15921987	15932060	-	CDS,three_prime_UTR
3	LOC_Os05g27100	expressed protein	gene	expressed protein	chr5	15713038	15716205	-	CDS
3	LOC_Os09g19640	holocarboxylase synthetase, putative, expressed	gene	holocarboxylase synthetase, putative, expressed	chr9	11734361	11739274	+	CDS,three_prime_UTR
3	LOC_Os01g31360	expressed protein	gene	expressed protein	chr1	17150609	17156810	+	CDS,three_prime_UTR
3	LOC_Os09g10820	oxidoreductase domain protein, putative, expressed	gene	oxidoreductase domain protein, putative, expressed	chr9	5899633	5904440	+	CDS,three_prime_UTR
3	LOC_Os08g28970	expressed protein	gene	expressed protein	chr8	17727719	17729573	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g49050	hAT dimerisation domain containing protein, expressed	gene	hAT dimerisation domain containing protein, expressed	chr6	29726337	29730977	+	CDS,promoter
3	LOC_Os04g43700	glycosyl transferase 8 domain containing protein, putative, expressed	gene	glycosyl transferase 8 domain containing protein, putative, expressed	chr4	25675232	25680434	+	CDS
3	LOC_Os10g26560	expressed protein	gene	expressed protein	chr10	13771925	13777438	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g02080	expressed protein	gene	expressed protein	chr3	657616	660583	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g46750	GPI mannosyltransferase 1, putative, expressed	gene	GPI mannosyltransferase 1, putative, expressed	chr3	26441920	26444576	+	CDS,three_prime_UTR,promoter
3	LOC_Os04g50860	expressed protein	gene	expressed protein	chr4	29892495	29895270	-	CDS,downstream
3	LOC_Os01g61990	ankyrin repeat-containing protein, putative, expressed	gene	ankyrin repeat-containing protein, putative, expressed	chr1	35883726	35887971	-	CDS,three_prime_UTR
3	LOC_Os04g46480	expressed protein	gene	expressed protein	chr4	27385195	27387577	-	CDS,three_prime_UTR
3	LOC_Os08g42940	hypothetical protein	gene	hypothetical protein	chr8	27133367	27133573	+	CDS,promoter,downstream
3	LOC_Os02g17850	TOM2B, putative, expressed	gene	TOM2B, putative, expressed	chr2	10330691	10333820	+	three_prime_UTR
3	LOC_Os06g45250	tRNA pseudouridine synthase family protein, putative, expressed	gene	tRNA pseudouridine synthase family protein, putative, expressed	chr6	27340867	27344792	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g26860	START domain containing protein, putative, expressed	gene	START domain containing protein, putative, expressed	chr2	15764571	15769479	+	CDS,three_prime_UTR
3	LOC_Os01g04409	OsWAK1 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed	gene	OsWAK1 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed	chr1	1956777	1966451	-	CDS
3	LOC_Os03g04460	outer mitochondrial membrane porin, putative, expressed	gene	outer mitochondrial membrane porin, putative, expressed	chr3	2068450	2072226	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g51360	lysM domain containing protein, putative, expressed	gene	lysM domain containing protein, putative, expressed	chr6	31104335	31106969	+	CDS,three_prime_UTR
3	LOC_Os05g02310	soluble inorganic pyrophosphatase, putative, expressed	gene	soluble inorganic pyrophosphatase, putative, expressed	chr5	739646	742966	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g33930	DUF1336 domain containing protein, expressed	gene	DUF1336 domain containing protein, expressed	chr10	17965318	17969581	+	CDS
3	LOC_Os08g37280	PWWP domain containing protein, expressed	gene	PWWP domain containing protein, expressed	chr8	23559126	23563687	+	CDS,three_prime_UTR
3	LOC_Os01g66420	PHD finger protein, putative, expressed	gene	PHD finger protein, putative, expressed	chr1	38565104	38569818	-	CDS
3	LOC_Os09g26570	CAAX amino terminal protease family protein, putative, expressed	gene	CAAX amino terminal protease family protein, putative, expressed	chr9	16092497	16095483	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g38570	transcription factor like protein, putative, expressed	gene	transcription factor like protein, putative, expressed	chr9	22187611	22191361	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g09089	protein kinase PKN/PRK1, effector, putative, expressed	gene	protein kinase PKN/PRK1, effector, putative, expressed	chr12	4747015	4759860	-	three_prime_UTR
3	LOC_Os02g02290	SNF2 family N-terminal domain containing protein, expressed	gene	SNF2 family N-terminal domain containing protein, expressed	chr2	748704	759273	-	CDS,promoter
3	LOC_Os02g35315	expressed protein	gene	expressed protein	chr2	21228683	21230243	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os06g17280	PHD-finger family protein, expressed	gene	PHD-finger family protein, expressed	chr6	10002547	10006034	+	CDS
3	LOC_Os01g07330	expressed protein	gene	expressed protein	chr1	3455200	3463954	-	CDS,three_prime_UTR
3	LOC_Os11g31660	expressed protein	gene	expressed protein	chr11	18049905	18054728	+	CDS
3	LOC_Os03g12430	PPR repeat containing protein, putative, expressed	gene	PPR repeat containing protein, putative, expressed	chr3	6562354	6564219	-	CDS,three_prime_UTR
3	LOC_Os11g30790	expressed protein	gene	expressed protein	chr11	17468194	17474879	+	CDS,three_prime_UTR
3	LOC_Os11g41130	vacuolar protein sorting-associated protein 26, putative, expressed	gene	vacuolar protein sorting-associated protein 26, putative, expressed	chr11	24176366	24180831	+	CDS,three_prime_UTR
3	LOC_Os03g05260	ankyrin repeat domain containing protein, expressed	gene	ankyrin repeat domain containing protein, expressed	chr3	2542608	2545352	-	CDS,three_prime_UTR
3	LOC_Os11g47830	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr11	28322684	28329717	-	CDS,three_prime_UTR,downstream
3	LOC_Os11g01340	omega-3 fatty acid desaturase, chloroplast precursor, putative, expressed	gene	omega-3 fatty acid desaturase, chloroplast precursor, putative, expressed	chr11	198735	202906	-	CDS,promoter
3	LOC_Os03g58070	frigida, putative, expressed	gene	frigida, putative, expressed	chr3	33054227	33058062	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g60520	expressed protein	gene	expressed protein	chr3	34389837	34393147	-	CDS
3	LOC_Os05g34720	transcriptional regulator, putative, expressed	gene	transcriptional regulator, putative, expressed	chr5	20533114	20536268	+	CDS
3	LOC_Os12g37580	ABC transporter, ATP-binding protein, putative	gene	ABC transporter, ATP-binding protein, putative	chr12	23038371	23044189	+	CDS
3	LOC_Os04g52860	TKL_IRAK_CrRLK1L-1.9 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed	gene	TKL_IRAK_CrRLK1L-1.9 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed	chr4	31293148	31296895	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g45160	DTA2, putative, expressed	gene	DTA2, putative, expressed	chr4	26510499	26515411	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g02520	cupin domain containing protein, expressed	gene	cupin domain containing protein, expressed	chr5	872961	876104	-	CDS,three_prime_UTR,downstream
3	LOC_Os05g51754	expressed protein	gene	expressed protein	chr5	29630100	29632003	-	three_prime_UTR,promoter
3	LOC_Os01g57110	SNF2 family N-terminal domain containing protein, expressed	gene	SNF2 family N-terminal domain containing protein, expressed	chr1	32999003	33009177	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g40330	OsFBX141 - F-box domain containing protein, expressed	gene	OsFBX141 - F-box domain containing protein, expressed	chr4	23790935	23794391	-	three_prime_UTR,promoter
3	LOC_Os01g32780	universal stress protein domain containing protein, putative, expressed	gene	universal stress protein domain containing protein, putative, expressed	chr1	17989782	17992718	-	CDS,three_prime_UTR,downstream
3	LOC_Os06g45860	molybdenum cofactor sulfurase, putative, expressed	gene	molybdenum cofactor sulfurase, putative, expressed	chr6	27748133	27755344	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g09590	ribosome, putative, expressed	gene	ribosome, putative, expressed	chr2	4936407	4937803	-	three_prime_UTR,promoter,downstream
3	LOC_Os07g41750	40S ribosomal protein S3-1, putative, expressed	gene	40S ribosomal protein S3-1, putative, expressed	chr7	25018444	25020719	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g35939	expressed protein	gene	expressed protein	chr8	22657858	22667288	-	CDS,downstream
3	LOC_Os02g09060	BRCA1-associated protein, putative, expressed	gene	BRCA1-associated protein, putative, expressed	chr2	4630327	4634620	-	three_prime_UTR,CDS,promoter,downstream
3	LOC_Os07g30830	SNF7 family protein, putative, expressed	gene	SNF7 family protein, putative, expressed	chr7	18249929	18252318	+	three_prime_UTR,downstream
3	LOC_Os07g32650	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr7	19472300	19476062	-	CDS,downstream
3	LOC_Os01g49690	Ser/Thr protein phosphatase family protein, putative, expressed	gene	Ser/Thr protein phosphatase family protein, putative, expressed	chr1	28554890	28559654	+	CDS,three_prime_UTR
3	LOC_Os03g13770	tubulin, putative, expressed	gene	tubulin, putative, expressed	chr3	7452551	7456734	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g20620	OsMan07 - Endo-Beta-Mannanase, expressed	gene	OsMan07 - Endo-Beta-Mannanase, expressed	chr6	11876530	11880769	+	CDS
3	LOC_Os03g62160	expressed protein	gene	expressed protein	chr3	35201368	35204220	-	CDS
3	LOC_Os09g28489	expressed protein	gene	expressed protein	chr9	17325915	17327679	-	three_prime_UTR,promoter
3	LOC_Os01g10010	prenylated rab acceptor, putative, expressed	gene	prenylated rab acceptor, putative, expressed	chr1	5212932	5215703	-	three_prime_UTR,promoter
3	LOC_Os11g20490	expressed protein	gene	expressed protein	chr11	11864727	11867818	-	CDS
3	LOC_Os02g37880	cyclin G-associated kinase, putative, expressed	gene	cyclin G-associated kinase, putative, expressed	chr2	22886399	22891575	+	CDS,three_prime_UTR
3	LOC_Os03g18840	NUC189 domain containing protein, expressed	gene	NUC189 domain containing protein, expressed	chr3	10555148	10560761	+	CDS
3	LOC_Os03g62850	AMP-binding enzyme, putative, expressed	gene	AMP-binding enzyme, putative, expressed	chr3	35542033	35550917	-	CDS
3	LOC_Os02g42134	ARF GTPase-activating domain-containing protein, putative, expressed	gene	ARF GTPase-activating domain-containing protein, putative, expressed	chr2	25323314	25336072	+	CDS,three_prime_UTR
3	LOC_Os08g39120	expressed protein	gene	expressed protein	chr8	24709711	24712951	+	CDS
3	LOC_Os07g36170	chitin-inducible gibberellin-responsive protein, putative, expressed	gene	chitin-inducible gibberellin-responsive protein, putative, expressed	chr7	21613960	21619334	+	five_prime_UTR,CDS
3	LOC_Os12g13380	adenylate kinase, putative, expressed	gene	adenylate kinase, putative, expressed	chr12	7473822	7477717	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g48010	WD-40 repeat family protein, putative, expressed	gene	WD-40 repeat family protein, putative, expressed	chr4	28378680	28382685	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g48010	exostosin, putative, expressed	gene	exostosin, putative, expressed	chr3	27290401	27293717	+	CDS,downstream
3	LOC_Os11g09850	expressed protein	gene	expressed protein	chr11	5272168	5275728	+	three_prime_UTR
3	LOC_Os01g05289	expressed protein	gene	expressed protein	chr1	2487387	2490433	+	CDS,three_prime_UTR
3	LOC_Os11g29850	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr11	16863460	16866844	+	CDS,three_prime_UTR
3	LOC_Os05g48870	auxin response factor 15, putative, expressed	gene	auxin response factor 15, putative, expressed	chr5	27971735	27977255	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os04g47906	gamma-tubulin complex component 6, putative, expressed	gene	gamma-tubulin complex component 6, putative, expressed	chr4	28298899	28303524	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g09600	expressed protein	gene	expressed protein	chr2	4938605	4942072	-	three_prime_UTR,promoter
3	LOC_Os02g04450	plant-specific domain TIGR01589 family protein, putative, expressed	gene	plant-specific domain TIGR01589 family protein, putative, expressed	chr2	1967698	1972819	+	three_prime_UTR,CDS,downstream
3	LOC_Os12g01850	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr12	495700	501261	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g52900	glutaredoxin 2, putative, expressed	gene	glutaredoxin 2, putative, expressed	chr2	32343223	32347039	+	three_prime_UTR,downstream
3	LOC_Os02g34470	expressed protein	gene	expressed protein	chr2	20647001	20654726	+	three_prime_UTR,promoter
3	LOC_Os03g57840	peptidase M50, mammalian sterol-regulatory element binding protein, putative, expressed	gene	peptidase M50, mammalian sterol-regulatory element binding protein, putative, expressed	chr3	32944414	32949759	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g42730	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr1	24311557	24316509	+	CDS
3	LOC_Os04g48390	uncharacterized membrane protein, putative, expressed	gene	uncharacterized membrane protein, putative, expressed	chr4	28677456	28683986	+	CDS
3	LOC_Os02g20270	expressed protein	gene	expressed protein	chr2	11935196	11941769	-	CDS,three_prime_UTR
3	LOC_Os12g05750	eukaryotic aspartyl protease domain containing protein	gene	eukaryotic aspartyl protease domain containing protein	chr12	2649653	2650771	-	CDS,promoter,downstream
3	LOC_Os02g47590	ornithine carbamoyltransferase, putative, expressed	gene	ornithine carbamoyltransferase, putative, expressed	chr2	29072392	29075393	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g11310	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr3	5816877	5819748	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g58970	uncharacterized ACR, YggU family COG1872 containing protein, expressed	gene	uncharacterized ACR, YggU family COG1872 containing protein, expressed	chr4	34899197	34901165	-	CDS,three_prime_UTR
3	LOC_Os11g37100	expressed protein	gene	expressed protein	chr11	21440213	21443138	+	three_prime_UTR,downstream
3	LOC_Os04g56160	plasma membrane ATPase, putative, expressed	gene	plasma membrane ATPase, putative, expressed	chr4	33272632	33279819	+	CDS
3	LOC_Os12g12360	transposon protein, putative, Mutator sub-class, expressed	gene	transposon protein, putative, Mutator sub-class, expressed	chr12	6798086	6805867	-	CDS,three_prime_UTR
3	LOC_Os11g04920	expressed protein	gene	expressed protein	chr11	2093544	2096758	+	CDS
3	LOC_Os12g13130	ZOS12-03 - C2H2 zinc finger protein, expressed	gene	ZOS12-03 - C2H2 zinc finger protein, expressed	chr12	7304037	7308762	+	CDS
3	LOC_Os11g03240	MATE efflux family protein, putative, expressed	gene	MATE efflux family protein, putative, expressed	chr11	1185105	1188697	+	CDS
3	LOC_Os12g13720	Plant PDR ABC transporter associated domain containing protein, expressed	gene	Plant PDR ABC transporter associated domain containing protein, expressed	chr12	7729148	7740924	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g05840	VIL2 protein, putative, expressed	gene	VIL2 protein, putative, expressed	chr2	2876551	2882175	-	three_prime_UTR,promoter
3	LOC_Os08g43580	acyl carrier protein, putative, expressed	gene	acyl carrier protein, putative, expressed	chr8	27563087	27565916	-	three_prime_UTR,CDS
3	LOC_Os01g56580	CK1_CaseinKinase_1a.3 - CK1 includes the casein kinase 1 kinases, expressed	gene	CK1_CaseinKinase_1a.3 - CK1 includes the casein kinase 1 kinases, expressed	chr1	32614650	32621850	+	CDS,three_prime_UTR
3	LOC_Os05g45830	expressed protein	gene	expressed protein	chr5	26482022	26489501	-	three_prime_UTR
3	LOC_Os02g49830	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr2	30442173	30443639	-	CDS,promoter
3	LOC_Os11g34690	expressed protein	gene	expressed protein	chr11	19855255	19860346	+	CDS
3	LOC_Os01g58740	glycerol-3-phosphate dehydrogenase, putative, expressed	gene	glycerol-3-phosphate dehydrogenase, putative, expressed	chr1	33951049	33955085	-	CDS,downstream
3	LOC_Os04g46050	Alg9-like mannosyltransferase protein, putative, expressed	gene	Alg9-like mannosyltransferase protein, putative, expressed	chr4	27090084	27097638	-	CDS
3	LOC_Os07g43070	expressed protein	gene	expressed protein	chr7	25803323	25806759	-	CDS
3	LOC_Os04g58470	choline transporter-related, putative, expressed	gene	choline transporter-related, putative, expressed	chr4	34595388	34600017	-	CDS,three_prime_UTR
3	LOC_Os06g07869	cytochrome b-c1 complex subunit 8, putative	gene	cytochrome b-c1 complex subunit 8, putative	chr6	3827205	3828962	+	CDS,promoter,downstream
3	LOC_Os01g33060	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr1	18162700	18172557	+	CDS,three_prime_UTR
3	LOC_Os07g38260	insulin-degrading enzyme, putative, expressed	gene	insulin-degrading enzyme, putative, expressed	chr7	22938111	22953826	-	CDS,downstream
3	LOC_Os04g38620	NAP domain containing protein, putative, expressed	gene	NAP domain containing protein, putative, expressed	chr4	22758069	22761770	-	CDS,promoter,downstream
3	LOC_Os08g15090	diacylglycerol kinase catalytic domain family protein, expressed	gene	diacylglycerol kinase catalytic domain family protein, expressed	chr8	9126981	9135749	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g21900	uroporphyrinogen decarboxylase, putative, expressed	gene	uroporphyrinogen decarboxylase, putative, expressed	chr3	12527783	12531416	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os12g03816	OsCML3 - Calmodulin-related calcium sensor protein, expressed	gene	OsCML3 - Calmodulin-related calcium sensor protein, expressed	chr12	1558859	1560568	-	three_prime_UTR,promoter,downstream
3	LOC_Os02g03720	expressed protein	gene	expressed protein	chr2	1560693	1563343	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g02140	STIP1 homology and U box-containing protein 1, putative, expressed	gene	STIP1 homology and U box-containing protein 1, putative, expressed	chr8	714589	719189	+	CDS,three_prime_UTR
3	LOC_Os06g37690	S-locus-like receptor protein kinase, putative	gene	S-locus-like receptor protein kinase, putative	chr6	22330489	22332909	+	CDS,promoter
3	LOC_Os02g46140	OsFBX59 - F-box domain containing protein, expressed	gene	OsFBX59 - F-box domain containing protein, expressed	chr2	28116435	28118296	+	three_prime_UTR,downstream
3	LOC_Os01g68630	leaf senescence related protein, putative, expressed	gene	leaf senescence related protein, putative, expressed	chr1	39856761	39860536	+	CDS,three_prime_UTR
3	LOC_Os01g56980	histidine acid phosphatase, putative, expressed	gene	histidine acid phosphatase, putative, expressed	chr1	32909218	32924521	-	CDS,promoter
3	LOC_Os03g63360	glutathione S-transferase, putative, expressed	gene	glutathione S-transferase, putative, expressed	chr3	35798908	35801784	-	CDS,three_prime_UTR
3	LOC_Os03g10230	expressed protein	gene	expressed protein	chr3	5205265	5210449	+	CDS,three_prime_UTR,promoter
3	LOC_Os02g57500	expressed protein	gene	expressed protein	chr2	35224833	35228093	-	CDS
3	LOC_Os04g59494	transportin-2, putative, expressed	gene	transportin-2, putative, expressed	chr4	35183965	35197395	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g02570	autophagy protein 5, putative, expressed	gene	autophagy protein 5, putative, expressed	chr2	930252	934291	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g05630	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr2	2744207	2747576	+	three_prime_UTR,CDS
3	LOC_Os06g16420	amino acid transporter, putative, expressed	gene	amino acid transporter, putative, expressed	chr6	9395131	9398131	+	three_prime_UTR,CDS
3	LOC_Os04g42330	Spc97 / Spc98 family protein, putative, expressed	gene	Spc97 / Spc98 family protein, putative, expressed	chr4	24863289	24869344	+	CDS,three_prime_UTR
3	LOC_Os08g09690	nuclear transcription factor Y subunit, putative, expressed	gene	nuclear transcription factor Y subunit, putative, expressed	chr8	5596557	5600332	+	CDS
3	LOC_Os06g23360	LTPL70 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	gene	LTPL70 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	chr6	13630704	13631941	+	five_prime_UTR,promoter,downstream
3	LOC_Os04g32770	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr4	19594061	19599913	+	CDS,promoter
3	LOC_Os09g31490	reductase, putative, expressed	gene	reductase, putative, expressed	chr9	18993539	18997420	-	CDS
3	LOC_Os02g54070	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	33112011	33117694	+	CDS,downstream
3	LOC_Os07g37790	expressed protein	gene	expressed protein	chr7	22658569	22662685	+	CDS,downstream
3	LOC_Os11g34820	THUMP domain-containing protein, putative, expressed	gene	THUMP domain-containing protein, putative, expressed	chr11	19930793	19935747	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os03g45770	expressed protein	gene	expressed protein	chr3	25848676	25856194	-	CDS,three_prime_UTR
3	LOC_Os12g26030	FACT complex subunit SPT16, putative, expressed	gene	FACT complex subunit SPT16, putative, expressed	chr12	15118511	15121943	+	CDS,three_prime_UTR
3	LOC_Os12g13390	aspartyl aminopeptidase, putative, expressed	gene	aspartyl aminopeptidase, putative, expressed	chr12	7481725	7487184	-	CDS
3	LOC_Os01g13420	SOUL heme-binding protein, putative, expressed	gene	SOUL heme-binding protein, putative, expressed	chr1	7469710	7471743	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g30020	PSP domain containing protein, expressed	gene	PSP domain containing protein, expressed	chr6	17271732	17279408	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g07160	retrotransposon, putative, centromere-specific	gene	retrotransposon, putative, centromere-specific	chr10	3754084	3761581	-	CDS
3	LOC_Os08g06630	RNA polymerase sigma factor, putative, expressed	gene	RNA polymerase sigma factor, putative, expressed	chr8	3731444	3735524	+	CDS,three_prime_UTR
3	LOC_Os08g07960	mitotic checkpoint protein, putative, expressed	gene	mitotic checkpoint protein, putative, expressed	chr8	4495682	4501245	-	CDS,three_prime_UTR
3	LOC_Os07g33330	RNA recognition motif containing protein, putative	gene	RNA recognition motif containing protein, putative	chr7	19919343	19923341	+	CDS,downstream
3	LOC_Os04g36630	expressed protein	gene	expressed protein	chr4	21941580	21944036	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g07000	OsFBL28 - F-box domain and LRR containing protein, expressed	gene	OsFBL28 - F-box domain and LRR containing protein, expressed	chr6	3318112	3321613	-	CDS,three_prime_UTR
3	LOC_Os03g63380	expressed protein	gene	expressed protein	chr3	35810171	35812432	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g43220	chitinase domain-containing protein 1 precursor, putative, expressed	gene	chitinase domain-containing protein 1 precursor, putative, expressed	chr1	24690348	24696027	+	three_prime_UTR
3	LOC_Os04g58060	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr4	34395963	34400778	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os10g33104	expressed protein	gene	expressed protein	chr10	17274310	17278845	+	five_prime_UTR
3	LOC_Os03g24450	OsPOP8 - Putative Prolyl Oligopeptidase homologue, expressed	gene	OsPOP8 - Putative Prolyl Oligopeptidase homologue, expressed	chr3	13926134	13933836	-	CDS,three_prime_UTR
3	LOC_Os05g33100	endo-1,3;1,4-beta-D-glucanase precursor, putative, expressed	gene	endo-1,3;1,4-beta-D-glucanase precursor, putative, expressed	chr5	19347068	19351075	+	CDS
3	LOC_Os02g32340	Spc97 / Spc98 family protein, putative, expressed	gene	Spc97 / Spc98 family protein, putative, expressed	chr2	19085102	19091548	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g40250	down-regulated in metastasis family protein, expressed	gene	down-regulated in metastasis family protein, expressed	chr1	22708542	22727481	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g18070	bacterial transferase hexapeptide domain containing protein, expressed	gene	bacterial transferase hexapeptide domain containing protein, expressed	chr1	10118187	10122791	+	CDS,three_prime_UTR
3	LOC_Os02g42810	oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed	gene	oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed	chr2	25728592	25730803	+	CDS
3	LOC_Os02g54280	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr2	33273645	33289238	-	CDS
3	LOC_Os07g38590	carboxyl-terminal peptidase, putative, expressed	gene	carboxyl-terminal peptidase, putative, expressed	chr7	23177223	23181814	+	CDS
3	LOC_Os06g43610	formamidopyrimidine-DNA glycosylase, putative, expressed	gene	formamidopyrimidine-DNA glycosylase, putative, expressed	chr6	26228860	26231888	-	CDS
3	LOC_Os12g02810	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr12	990513	995183	-	three_prime_UTR,promoter
3	LOC_Os10g42250	expressed protein	gene	expressed protein	chr10	22682611	22685107	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g39350	eukaryotic translation initiation factor 2A, putative, expressed	gene	eukaryotic translation initiation factor 2A, putative, expressed	chr2	23743163	23747367	-	CDS,promoter
3	LOC_Os12g37939	unc-93 homolog A, putative, expressed	gene	unc-93 homolog A, putative, expressed	chr12	23274344	23281948	-	CDS
3	LOC_Os05g01450	eukaryotic translation initiation factor 3 subunit F, putative, expressed	gene	eukaryotic translation initiation factor 3 subunit F, putative, expressed	chr5	259953	262291	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g63680	expressed protein	gene	expressed protein	chr3	35961361	35963386	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g35720	transmembrane protein 18, putative, expressed	gene	transmembrane protein 18, putative, expressed	chr5	21143306	21145143	+	CDS,promoter,downstream
3	LOC_Os05g34040	monooxygenase, putative, expressed	gene	monooxygenase, putative, expressed	chr5	20040188	20049685	-	CDS,three_prime_UTR,downstream
3	LOC_Os02g47500	nodulin, putative, expressed	gene	nodulin, putative, expressed	chr2	29015795	29019208	+	CDS
3	LOC_Os08g09950	acyl-desaturase, chloroplast precursor, putative, expressed	gene	acyl-desaturase, chloroplast precursor, putative, expressed	chr8	5750425	5752750	-	three_prime_UTR,promoter
3	LOC_Os12g09660	expressed protein	gene	expressed protein	chr12	5098996	5101382	-	five_prime_UTR,CDS,promoter
3	LOC_Os05g07790	DNA binding protein, putative, expressed	gene	DNA binding protein, putative, expressed	chr5	4195255	4200468	-	CDS
3	LOC_Os01g73410	FYVE zinc finger domain containing protein, expressed	gene	FYVE zinc finger domain containing protein, expressed	chr1	42540286	42546078	+	CDS
3	LOC_Os02g46720	ara54-like RING finger protein, putative, expressed	gene	ara54-like RING finger protein, putative, expressed	chr2	28527032	28531127	+	three_prime_UTR,CDS,downstream
3	LOC_Os02g14500	expressed protein	gene	expressed protein	chr2	7991880	7996777	-	three_prime_UTR
3	LOC_Os03g38250	disease resistance RPP13-like protein 1, putative, expressed	gene	disease resistance RPP13-like protein 1, putative, expressed	chr3	21232110	21236446	+	CDS,downstream
3	LOC_Os09g19790	puromycin-sensitive aminopeptidase, putative, expressed	gene	puromycin-sensitive aminopeptidase, putative, expressed	chr9	11842700	11850262	+	CDS,three_prime_UTR
3	LOC_Os07g48780	OsCam1-2 - Calmodulin, expressed	gene	OsCam1-2 - Calmodulin, expressed	chr7	29196735	29199400	-	three_prime_UTR,promoter
3	LOC_Os04g14110	TRAF-type zinc finger family protein	gene	TRAF-type zinc finger family protein	chr4	7877248	7878423	+	CDS,promoter
3	LOC_Os07g18710	OsFBLD8 - F-box, LRR and FBD domain containing protein, expressed	gene	OsFBLD8 - F-box, LRR and FBD domain containing protein, expressed	chr7	11059319	11060944	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g17070	radical SAM enzyme, putative, expressed	gene	radical SAM enzyme, putative, expressed	chr12	9764080	9769741	-	CDS,three_prime_UTR
3	LOC_Os11g02310	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr11	670760	674575	+	three_prime_UTR
3	LOC_Os01g35580	expressed protein	gene	expressed protein	chr1	19680780	19685266	+	CDS,three_prime_UTR
3	LOC_Os03g51640	expressed protein	gene	expressed protein	chr3	29549696	29552754	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g41320	nucleotide-sugar transporter family protein, putative, expressed	gene	nucleotide-sugar transporter family protein, putative, expressed	chr4	24329793	24336492	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g46160	MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed	gene	MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed	chr7	27544281	27549569	+	CDS,three_prime_UTR
3	LOC_Os08g25590	UPF0041 domain containing protein, putative, expressed	gene	UPF0041 domain containing protein, putative, expressed	chr8	15568438	15571836	+	CDS,five_prime_UTR
3	LOC_Os03g61030	transcription termination factor nusG family protein, expressed	gene	transcription termination factor nusG family protein, expressed	chr3	34664156	34667364	+	three_prime_UTR
3	LOC_Os01g59340	dihydropyrimidinase, putative, expressed	gene	dihydropyrimidinase, putative, expressed	chr1	34294608	34306006	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g04140	serine acetyltransferase protein, putative, expressed	gene	serine acetyltransferase protein, putative, expressed	chr3	1891820	1896305	-	CDS,three_prime_UTR
3	LOC_Os01g71770	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr1	41572864	41577791	-	CDS,three_prime_UTR
3	LOC_Os03g50320	phosphatidylinositol 4-kinase PI4K, putative, expressed	gene	phosphatidylinositol 4-kinase PI4K, putative, expressed	chr3	28683369	28690988	-	CDS
3	LOC_Os04g44750	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr4	26320212	26323739	-	CDS,three_prime_UTR
3	LOC_Os10g32400	PsbP, putative, expressed	gene	PsbP, putative, expressed	chr10	16910228	16918471	-	CDS
3	LOC_Os04g57480	OTU-like cysteine protease family protein, putative, expressed	gene	OTU-like cysteine protease family protein, putative, expressed	chr4	34015915	34020578	-	CDS,three_prime_UTR
3	LOC_Os07g37960	exostosin family domain containing protein, expressed	gene	exostosin family domain containing protein, expressed	chr7	22779115	22782765	+	CDS
3	LOC_Os02g56880	transcriptional corepressor LEUNIG, putative, expressed	gene	transcriptional corepressor LEUNIG, putative, expressed	chr2	34856678	34867013	-	CDS
3	LOC_Os03g11500	DUF647 domain containing protein, putative, expressed	gene	DUF647 domain containing protein, putative, expressed	chr3	5954623	5959605	-	CDS,promoter,downstream
3	LOC_Os08g43180	expressed protein	gene	expressed protein	chr8	27303542	27306938	-	three_prime_UTR,promoter
3	LOC_Os02g56090	expressed protein	gene	expressed protein	chr2	34319369	34321485	+	CDS,downstream
3	LOC_Os07g42200	tyrosine protein kinase domain containing protein, putative, expressed	gene	tyrosine protein kinase domain containing protein, putative, expressed	chr7	25254066	25259021	+	CDS
3	LOC_Os12g07150	amidase family protein, putative, expressed	gene	amidase family protein, putative, expressed	chr12	3502115	3508266	-	CDS,three_prime_UTR
3	LOC_Os02g15310	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr2	8553856	8558164	-	CDS
3	LOC_Os03g11570	proteasome subunit, putative, expressed	gene	proteasome subunit, putative, expressed	chr3	5998891	6002856	+	CDS,three_prime_UTR
3	LOC_Os11g41990	armadillo/beta-catenin-like repeat family protein, expressed	gene	armadillo/beta-catenin-like repeat family protein, expressed	chr11	24779622	24786607	-	CDS
3	LOC_Os06g04500	cornichon protein, putative, expressed	gene	cornichon protein, putative, expressed	chr6	1926257	1929884	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g03899	major facilitator superfamily antiporter, putative, expressed	gene	major facilitator superfamily antiporter, putative, expressed	chr12	1605073	1619845	-	CDS
3	LOC_Os03g46330	pattern formation protein EMB30, putative, expressed	gene	pattern formation protein EMB30, putative, expressed	chr3	26200286	26206408	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g35630	AAA family ATPase, putative, expressed	gene	AAA family ATPase, putative, expressed	chr2	21419788	21425846	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g28480	expressed protein	gene	expressed protein	chr9	17323423	17328000	+	three_prime_UTR,CDS
3	LOC_Os10g42420	GTPase-activating protein, putative, expressed	gene	GTPase-activating protein, putative, expressed	chr10	22765136	22769216	-	CDS
3	LOC_Os09g26554	expressed protein	gene	expressed protein	chr9	16073880	16077435	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g15300	zinc finger helicase family protein, putative, expressed	gene	zinc finger helicase family protein, putative, expressed	chr1	8559623	8568631	-	CDS,three_prime_UTR,downstream
3	LOC_Os08g44010	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr8	27700689	27704534	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g34200	OsFBX338 - F-box domain containing protein	gene	OsFBX338 - F-box domain containing protein	chr9	20186675	20191104	+	CDS
3	LOC_Os01g10860	expressed protein	gene	expressed protein	chr1	5793747	5796674	-	CDS,three_prime_UTR
3	LOC_Os02g01332	ribosomal protein L6, putative, expressed	gene	ribosomal protein L6, putative, expressed	chr2	180320	183442	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g34200	histone-like transcription factor and archaeal histone, putative, expressed	gene	histone-like transcription factor and archaeal histone, putative, expressed	chr11	19559890	19563575	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g38050	galactosyltransferase, putative, expressed	gene	galactosyltransferase, putative, expressed	chr3	21116396	21121966	-	CDS
3	LOC_Os06g38930	leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed	gene	leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed	chr6	23093021	23096527	+	CDS,promoter,downstream
3	LOC_Os11g23170	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr11	12869782	12878463	+	CDS,three_prime_UTR
3	LOC_Os02g38810	26S proteasome non-ATPase regulatory subunit 6, putative, expressed	gene	26S proteasome non-ATPase regulatory subunit 6, putative, expressed	chr2	23455595	23460059	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g01170	HECT-domain domain containing protein, expressed	gene	HECT-domain domain containing protein, expressed	chr2	86464	91606	-	CDS,three_prime_UTR
3	LOC_Os01g25530	pentatricopeptide repeat protein PPR986-12, putative, expressed	gene	pentatricopeptide repeat protein PPR986-12, putative, expressed	chr1	14470216	14475712	+	three_prime_UTR
3	LOC_Os12g34850	Fibronectin type III domain containing protein, expressed	gene	Fibronectin type III domain containing protein, expressed	chr12	21176983	21181347	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g36050	prefoldin subunit, putative, expressed	gene	prefoldin subunit, putative, expressed	chr11	20719396	20721616	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g01240	CPuORF11 - conserved peptide uORF-containing transcript, expressed	gene	CPuORF11 - conserved peptide uORF-containing transcript, expressed	chr2	132948	135155	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g04300	fringe-related protein, putative, expressed	gene	fringe-related protein, putative, expressed	chr8	2107303	2111137	+	CDS,three_prime_UTR
3	LOC_Os05g50624	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr5	28959117	28961453	+	CDS,three_prime_UTR
3	LOC_Os11g38450	hypothetical protein	gene	hypothetical protein	chr11	22302469	22306002	-	CDS,promoter
3	LOC_Os07g05650	MAGE-8 antigen-related, putative, expressed	gene	MAGE-8 antigen-related, putative, expressed	chr7	2689659	2692090	+	CDS
3	LOC_Os02g40040	expressed protein	gene	expressed protein	chr2	24234218	24236689	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g45490	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	27140252	27145948	+	CDS
3	LOC_Os09g39570	beta-amylase, putative, expressed	gene	beta-amylase, putative, expressed	chr9	22712799	22716629	+	three_prime_UTR,downstream
3	LOC_Os07g04860	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr7	2139733	2142985	-	CDS
3	LOC_Os03g26030	expressed protein	gene	expressed protein	chr3	14914194	14922921	+	CDS,downstream
3	LOC_Os04g53190	CPuORF12 - conserved peptide uORF-containing transcript, expressed	gene	CPuORF12 - conserved peptide uORF-containing transcript, expressed	chr4	31483948	31489491	-	CDS
3	LOC_Os03g38740	Dicer, putative, expressed	gene	Dicer, putative, expressed	chr3	21499186	21514079	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g35010	ARID/BRIGHT DNA-binding domain containing protein	gene	ARID/BRIGHT DNA-binding domain containing protein	chr8	22051369	22055984	-	CDS
3	LOC_Os05g11870	hydrolase, NUDIX family, domain containing protein, expressed	gene	hydrolase, NUDIX family, domain containing protein, expressed	chr5	6766436	6769056	+	CDS,three_prime_UTR
3	LOC_Os12g44140	expressed protein	gene	expressed protein	chr12	27345228	27348995	+	CDS,promoter
3	LOC_Os03g11660	cysteine synthase, putative, expressed	gene	cysteine synthase, putative, expressed	chr3	6084639	6088052	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g63830	dehydrodolichyl diphosphate synthase, putative, expressed	gene	dehydrodolichyl diphosphate synthase, putative, expressed	chr1	37032983	37034975	-	three_prime_UTR,promoter
3	LOC_Os12g41250	methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor, putative, expressed	gene	methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor, putative, expressed	chr12	25542850	25548459	+	CDS
3	LOC_Os03g01580	expressed protein	gene	expressed protein	chr3	360701	366354	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g10370	ADP-ribosylation factor, putative, expressed	gene	ADP-ribosylation factor, putative, expressed	chr3	5286590	5289565	-	CDS,three_prime_UTR
3	LOC_Os02g55260	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr2	33832789	33837778	-	three_prime_UTR
3	LOC_Os03g37090	expressed protein	gene	expressed protein	chr3	20557498	20559981	-	CDS,promoter
3	LOC_Os09g32210	pumilio-family RNA binding repeat containing protein, expressed	gene	pumilio-family RNA binding repeat containing protein, expressed	chr9	19220106	19227154	-	CDS,promoter
3	LOC_Os05g36120	polypyrimidine tract-binding protein, putative, expressed	gene	polypyrimidine tract-binding protein, putative, expressed	chr5	21352461	21358180	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g14590	pathogen-related protein, putative, expressed	gene	pathogen-related protein, putative, expressed	chr1	8174375	8176889	-	three_prime_UTR,promoter,downstream
3	LOC_Os12g44250	vesicle-associated membrane protein, putative, expressed	gene	vesicle-associated membrane protein, putative, expressed	chr12	27405485	27408138	+	CDS,promoter
3	LOC_Os04g40874	glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform, putative, expressed	gene	glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform, putative, expressed	chr4	24076230	24082662	+	three_prime_UTR,downstream
3	LOC_Os05g50690	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr5	28995598	28999635	-	CDS
3	LOC_Os08g37950	copper-transporting ATPase PAA1, putative, expressed	gene	copper-transporting ATPase PAA1, putative, expressed	chr8	24028558	24036602	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g05590	OsFBX186 - F-box domain containing protein, expressed	gene	OsFBX186 - F-box domain containing protein, expressed	chr6	2531410	2533593	+	three_prime_UTR,promoter,downstream
3	LOC_Os02g10480	stromal membrane-associated protein, putative, expressed	gene	stromal membrane-associated protein, putative, expressed	chr2	5505016	5508425	+	CDS,promoter
3	LOC_Os04g55850	nuclease PA3, putative, expressed	gene	nuclease PA3, putative, expressed	chr4	33068805	33071515	+	CDS
3	LOC_Os11g40420	expressed protein	gene	expressed protein	chr11	23629969	23634701	-	CDS,three_prime_UTR
3	LOC_Os02g44111	sec20 domain containing protein, expressed	gene	sec20 domain containing protein, expressed	chr2	26657394	26661813	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g02680	expressed protein	gene	expressed protein	chr8	1115927	1118643	-	three_prime_UTR,promoter
3	LOC_Os06g02570	syntaxin, putative, expressed	gene	syntaxin, putative, expressed	chr6	901498	906097	-	CDS,three_prime_UTR,downstream
3	LOC_Os06g20370	microtubule associated protein, putative, expressed	gene	microtubule associated protein, putative, expressed	chr6	11695838	11700294	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g24594	exonuclease, putative, expressed	gene	exonuclease, putative, expressed	chr6	14417162	14427792	-	three_prime_UTR,CDS
3	LOC_Os02g39390	expressed protein	gene	expressed protein	chr2	23763521	23766973	+	three_prime_UTR,downstream
3	LOC_Os03g21390	expressed protein	gene	expressed protein	chr3	12230886	12231595	+	CDS,downstream
3	LOC_Os03g53600	HTH DNA-binding protein, putative, expressed	gene	HTH DNA-binding protein, putative, expressed	chr3	30729354	30733145	+	CDS,three_prime_UTR
3	LOC_Os09g12800	zinc finger Ran-binding domain-containing protein 2, putative, expressed	gene	zinc finger Ran-binding domain-containing protein 2, putative, expressed	chr9	7346438	7353032	-	CDS,three_prime_UTR
3	LOC_Os05g39530	ribonuclease P family protein, putative, expressed	gene	ribonuclease P family protein, putative, expressed	chr5	23133575	23138906	-	CDS
3	LOC_Os08g29570	pleiotropic drug resistance protein 3, putative, expressed	gene	pleiotropic drug resistance protein 3, putative, expressed	chr8	18125821	18130344	-	five_prime_UTR,CDS,downstream
3	LOC_Os09g27140	expressed protein	gene	expressed protein	chr9	16502936	16507818	-	CDS,three_prime_UTR
3	LOC_Os10g30280	OsFBX386 - F-box domain containing protein, expressed	gene	OsFBX386 - F-box domain containing protein, expressed	chr10	15659389	15662785	+	CDS
3	LOC_Os06g05820	OsLonP2 - Putative Lon protease homologue, expressed	gene	OsLonP2 - Putative Lon protease homologue, expressed	chr6	2651070	2662465	+	CDS,three_prime_UTR
3	LOC_Os04g41330	expressed protein	gene	expressed protein	chr4	24339947	24342552	+	three_prime_UTR,downstream
3	LOC_Os01g56350	PTAC12, putative, expressed	gene	PTAC12, putative, expressed	chr1	32469230	32475595	+	CDS,three_prime_UTR
3	LOC_Os05g13960	transposon protein, putative, Pong sub-class, expressed	gene	transposon protein, putative, Pong sub-class, expressed	chr5	7768406	7770355	+	CDS
3	LOC_Os08g36420	metal cation transporter, putative, expressed	gene	metal cation transporter, putative, expressed	chr8	22984381	22992760	-	CDS,three_prime_UTR
3	LOC_Os12g20390	expressed protein	gene	expressed protein	chr12	11901981	11904628	-	three_prime_UTR
3	LOC_Os02g19950	hypothetical protein	gene	hypothetical protein	chr2	11737374	11741559	-	CDS,promoter
3	LOC_Os02g01610	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr2	349533	354294	-	three_prime_UTR,promoter
3	LOC_Os09g33820	lecithine cholesterol acyltransferase, putative, expressed	gene	lecithine cholesterol acyltransferase, putative, expressed	chr9	19964721	19969671	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g62680	hypothetical protein	gene	hypothetical protein	chr3	35463153	35466824	-	CDS,promoter
3	LOC_Os02g47640	OsFBT4 - F-box and tubby domain containing protein, expressed	gene	OsFBT4 - F-box and tubby domain containing protein, expressed	chr2	29102628	29106361	+	CDS,three_prime_UTR
3	LOC_Os01g59060	50S ribosomal protein, putative, expressed	gene	50S ribosomal protein, putative, expressed	chr1	34132733	34134602	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g10930	peptide-N4-asparagine amidase A, putative, expressed	gene	peptide-N4-asparagine amidase A, putative, expressed	chr1	5827553	5829832	-	CDS,three_prime_UTR
3	LOC_Os06g03700	oligopeptide transporter, putative, expressed	gene	oligopeptide transporter, putative, expressed	chr6	1458193	1463340	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g21960	serine/threonine-protein kinase, putative, expressed	gene	serine/threonine-protein kinase, putative, expressed	chr1	12325460	12330750	+	CDS,three_prime_UTR
3	LOC_Os12g08260	dehydrogenase E1 component domain containing protein, expressed	gene	dehydrogenase E1 component domain containing protein, expressed	chr12	4208118	4212463	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g07050	aldehyde oxidase, putative, expressed	gene	aldehyde oxidase, putative, expressed	chr7	3470790	3475922	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g35114	receptor-like kinase, putative, expressed	gene	receptor-like kinase, putative, expressed	chr4	21168819	21172631	+	CDS
3	LOC_Os12g37430	PAPA-1-like conserved region family protein, expressed	gene	PAPA-1-like conserved region family protein, expressed	chr12	22939381	22942802	-	CDS,three_prime_UTR
3	LOC_Os04g10350	1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed	gene	1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed	chr4	5585766	5588140	+	CDS,three_prime_UTR
3	LOC_Os11g11050	initiation factor 2 subunit family domain containing protein, expressed	gene	initiation factor 2 subunit family domain containing protein, expressed	chr11	6096932	6101391	+	CDS,downstream
3	LOC_Os03g04390	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr3	2013773	2017319	-	CDS,three_prime_UTR,downstream
3	LOC_Os05g41910	expressed protein	gene	expressed protein	chr5	24478603	24481721	-	CDS,promoter
3	LOC_Os06g40060	glycosyltransferase family protein, putative, expressed	gene	glycosyltransferase family protein, putative, expressed	chr6	23842215	23846177	+	CDS,three_prime_UTR
3	LOC_Os05g44760	hexokinase, putative, expressed	gene	hexokinase, putative, expressed	chr5	25954715	25960357	+	CDS,three_prime_UTR
3	LOC_Os11g05990	digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed	gene	digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed	chr11	2813505	2820113	+	CDS,three_prime_UTR
3	LOC_Os04g52460	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr4	31002238	31010796	+	CDS,downstream
3	LOC_Os11g12330	disease resistance protein RPM1, putative, expressed	gene	disease resistance protein RPM1, putative, expressed	chr11	6874353	6880690	+	CDS,downstream
3	LOC_Os10g35200	katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed	gene	katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed	chr10	18727282	18734616	-	CDS,promoter
3	LOC_Os03g21850	nucleotidyltransferase, putative, expressed	gene	nucleotidyltransferase, putative, expressed	chr3	12491650	12498912	+	CDS
3	LOC_Os09g39474	expressed protein	gene	expressed protein	chr9	22687595	22689129	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g40720	glycosyl transferase, family 8, putative	gene	glycosyl transferase, family 8, putative	chr5	23811598	23815699	-	CDS,promoter
3	LOC_Os03g52794	phosphatidylinositol kinase, putative, expressed	gene	phosphatidylinositol kinase, putative, expressed	chr3	30255515	30273552	+	CDS
3	LOC_Os06g40190	phospholipase D, putative, expressed	gene	phospholipase D, putative, expressed	chr6	23927705	23931375	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g47180	expressed protein	gene	expressed protein	chr4	27830475	27836835	-	CDS
3	LOC_Os11g40400	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr11	23618486	23620363	-	CDS,promoter
3	LOC_Os06g47900	expressed protein	gene	expressed protein	chr6	28976494	28979806	+	three_prime_UTR,CDS
3	LOC_Os07g43060	transcription elongation factor SPT4 homolog 1, putative, expressed	gene	transcription elongation factor SPT4 homolog 1, putative, expressed	chr7	25796885	25799784	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g38500	expressed protein	gene	expressed protein	chr3	21369753	21374314	+	CDS,three_prime_UTR,promoter
3	LOC_Os07g38270	insulin-degrading enzyme, putative, expressed	gene	insulin-degrading enzyme, putative, expressed	chr7	22954730	22971678	-	CDS
3	LOC_Os04g21600	expressed protein	gene	expressed protein	chr4	12204349	12208444	-	CDS
3	LOC_Os04g34080	WD-40 repeat family protein, putative, expressed	gene	WD-40 repeat family protein, putative, expressed	chr4	20468377	20473435	-	CDS
3	LOC_Os07g11070	DUF630/DUF632 domains containing protein, putative, expressed	gene	DUF630/DUF632 domains containing protein, putative, expressed	chr7	6116819	6120773	-	CDS
3	LOC_Os05g05530	expressed protein	gene	expressed protein	chr5	2748300	2752895	-	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os08g28830	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr8	17625954	17628492	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g01140	hypothetical protein	gene	hypothetical protein	chr9	146529	151791	-	three_prime_UTR
3	LOC_Os07g38620	pyridoxamine 5'-phosphate oxidase family protein, putative, expressed	gene	pyridoxamine 5'-phosphate oxidase family protein, putative, expressed	chr7	23193210	23198127	-	CDS
3	LOC_Os02g14000	actin-related protein 2/3 complex subunit 3, putative, expressed	gene	actin-related protein 2/3 complex subunit 3, putative, expressed	chr2	7643702	7646134	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g51150	RNA polymerase sigma factor, putative, expressed	gene	RNA polymerase sigma factor, putative, expressed	chr5	29278596	29282836	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g26460	CS domain containing protein, putative, expressed	gene	CS domain containing protein, putative, expressed	chr3	15117075	15120176	-	three_prime_UTR,CDS,promoter
3	LOC_Os01g69030	sucrose-phosphate synthase, putative, expressed	gene	sucrose-phosphate synthase, putative, expressed	chr1	40100361	40106143	-	CDS
3	LOC_Os05g44770	receptor-like protein kinase 5 precursor, putative, expressed	gene	receptor-like protein kinase 5 precursor, putative, expressed	chr5	25958994	25963139	-	three_prime_UTR,promoter
3	LOC_Os03g14720	transcription initiation factor IIF, alpha subunit domain containing protein, expressed	gene	transcription initiation factor IIF, alpha subunit domain containing protein, expressed	chr3	8001941	8007227	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g08380	CR084 protein, putative, expressed	gene	CR084 protein, putative, expressed	chr2	4460297	4463701	+	CDS,three_prime_UTR
3	LOC_Os08g29150	phospholipid-transporting ATPase, putative, expressed	gene	phospholipid-transporting ATPase, putative, expressed	chr8	17841476	17848203	+	CDS,three_prime_UTR
3	LOC_Os02g38494	protein phosphatase 2C, putative	gene	protein phosphatase 2C, putative	chr2	23273999	23279506	+	five_prime_UTR,CDS,promoter
3	LOC_Os03g61210	domain of unknown function domain containing protein, expressed	gene	domain of unknown function domain containing protein, expressed	chr3	34752158	34755924	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g44200	ECT5, putative, expressed	gene	ECT5, putative, expressed	chr8	27822318	27827602	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g39300	expressed protein	gene	expressed protein	chr7	23526259	23534492	+	CDS
3	LOC_Os05g51490	SIT4 phosphatase-associated protein domain containing protein, expressed	gene	SIT4 phosphatase-associated protein domain containing protein, expressed	chr5	29457437	29464819	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g39600	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr6	23504580	23509209	+	CDS,three_prime_UTR
3	LOC_Os04g44180	conserved hypothetical protein	gene	conserved hypothetical protein	chr4	25968491	25971994	+	CDS,downstream
3	LOC_Os05g44290	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr5	25709189	25713523	+	three_prime_UTR,CDS
3	LOC_Os10g10990	transcription initiation factor IIF, alpha subunit domain containing protein, expressed	gene	transcription initiation factor IIF, alpha subunit domain containing protein, expressed	chr10	6096507	6104381	-	CDS
3	LOC_Os12g09570	GTP binding protein, putative, expressed	gene	GTP binding protein, putative, expressed	chr12	5029791	5033557	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g26370	wiskott-Aldrich syndrome protein family member 2, putative, expressed	gene	wiskott-Aldrich syndrome protein family member 2, putative, expressed	chr2	15476478	15480076	-	three_prime_UTR,CDS
3	LOC_Os06g19380	expressed protein	gene	expressed protein	chr6	11029396	11033089	-	three_prime_UTR,promoter
3	LOC_Os02g03790	expressed protein	gene	expressed protein	chr2	1594561	1599327	+	CDS
3	LOC_Os05g34920	expressed protein	gene	expressed protein	chr5	20686312	20690344	+	CDS,three_prime_UTR
3	LOC_Os02g58210	jmjC domain containing protein, expressed	gene	jmjC domain containing protein, expressed	chr2	35618268	35624937	+	CDS
3	LOC_Os07g46580	DEAD-box ATP-dependent RNA helicase, putative	gene	DEAD-box ATP-dependent RNA helicase, putative	chr7	27818922	27822770	+	CDS
3	LOC_Os01g24680	3-hydroxyacyl-CoA dehydrogenase, putative, expressed	gene	3-hydroxyacyl-CoA dehydrogenase, putative, expressed	chr1	13886246	13892267	+	CDS,three_prime_UTR
3	LOC_Os07g31130	OsWAK72 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed	gene	OsWAK72 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed	chr7	18415304	18419427	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os03g58140	transmembrane BAX inhibitor motif-containing protein, putative, expressed	gene	transmembrane BAX inhibitor motif-containing protein, putative, expressed	chr3	33091743	33094354	-	three_prime_UTR,promoter,downstream
3	LOC_Os05g48290	T-complex protein, putative, expressed	gene	T-complex protein, putative, expressed	chr5	27621279	27625827	+	CDS,three_prime_UTR
3	LOC_Os05g48230	expressed protein	gene	expressed protein	chr5	27580471	27585200	+	CDS,downstream
3	LOC_Os04g46100	expressed protein	gene	expressed protein	chr4	27133182	27138277	-	CDS,three_prime_UTR
3	LOC_Os01g13300	B3 DNA binding domain containing protein, expressed	gene	B3 DNA binding domain containing protein, expressed	chr1	7416303	7421624	+	CDS,three_prime_UTR
3	LOC_Os09g27070	E2F-related protein, putative, expressed	gene	E2F-related protein, putative, expressed	chr9	16469981	16473585	+	CDS,three_prime_UTR
3	LOC_Os09g12290	bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor, putative, expressed	gene	bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor, putative, expressed	chr9	6994049	7008516	-	CDS,promoter
3	LOC_Os03g59070	phosphatase, putative, expressed	gene	phosphatase, putative, expressed	chr3	33620244	33623220	-	CDS,promoter,downstream
3	LOC_Os04g54350	SPRY-domain containing protein, putative, expressed	gene	SPRY-domain containing protein, putative, expressed	chr4	32163300	32166741	-	CDS,promoter
3	LOC_Os07g36250	peptide chain release factor protein, putative, expressed	gene	peptide chain release factor protein, putative, expressed	chr7	21667227	21670912	-	CDS,downstream
3	LOC_Os04g41830	myb-like DNA-binding domain containing protein, expressed	gene	myb-like DNA-binding domain containing protein, expressed	chr4	24590525	24594441	-	CDS
3	LOC_Os11g36470	ubiquitin carboxyl-terminal hydrolase 21, putative, expressed	gene	ubiquitin carboxyl-terminal hydrolase 21, putative, expressed	chr11	21034426	21048202	-	CDS,three_prime_UTR
3	LOC_Os08g38820	transmembrane 9 superfamily member, putative, expressed	gene	transmembrane 9 superfamily member, putative, expressed	chr8	24534972	24539459	-	CDS,three_prime_UTR
3	LOC_Os08g35620	HD domain containing protein, putative, expressed	gene	HD domain containing protein, putative, expressed	chr8	22443827	22447829	+	CDS,three_prime_UTR
3	LOC_Os11g07280	coatomer subunit beta-1, putative, expressed	gene	coatomer subunit beta-1, putative, expressed	chr11	3663966	3669404	-	CDS,three_prime_UTR
3	LOC_Os03g02420	KH domain containing protein, putative, expressed	gene	KH domain containing protein, putative, expressed	chr3	856752	858758	-	CDS,three_prime_UTR,downstream
3	LOC_Os10g36370	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr10	19359512	19368335	-	CDS,three_prime_UTR
3	LOC_Os01g31980	MATE efflux family protein, putative, expressed	gene	MATE efflux family protein, putative, expressed	chr1	17503292	17511338	-	CDS
3	LOC_Os01g62500	OsFtsH3  FtsH protease, homologue of AtFtsH3/10, expressed	gene	OsFtsH3  FtsH protease, homologue of AtFtsH3/10, expressed	chr1	36181406	36186955	-	CDS
3	LOC_Os07g25590	decarboxylase, putative, expressed	gene	decarboxylase, putative, expressed	chr7	14666999	14675714	+	CDS
3	LOC_Os03g57110	expressed protein	gene	expressed protein	chr3	32553142	32557977	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g04090	expressed protein	gene	expressed protein	chr8	1987307	1989832	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g10850	meiotic coiled-coil protein 7, putative, expressed	gene	meiotic coiled-coil protein 7, putative, expressed	chr9	5933902	5939557	-	CDS,three_prime_UTR
3	LOC_Os03g42810	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	gene	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	chr3	23848144	23850362	+	CDS
3	LOC_Os08g37310	uncharacterized protein, YigZ family, putative, expressed	gene	uncharacterized protein, YigZ family, putative, expressed	chr8	23574006	23576382	-	three_prime_UTR,promoter,downstream
3	LOC_Os03g44820	glutamyl-tRNA, putative, expressed	gene	glutamyl-tRNA, putative, expressed	chr3	25274508	25276626	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g58380	3-hydroxybutyryl-CoA dehydrogenase, putative, expressed	gene	3-hydroxybutyryl-CoA dehydrogenase, putative, expressed	chr1	33729334	33731992	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g47870	anaphase-promoting complex subunit 11, putative, expressed	gene	anaphase-promoting complex subunit 11, putative, expressed	chr2	29279080	29281720	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g02450	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr2	862272	865065	+	five_prime_UTR,CDS,promoter,downstream
3	LOC_Os01g07540	G-patch domain containing protein, expressed	gene	G-patch domain containing protein, expressed	chr1	3609392	3614764	+	three_prime_UTR
3	LOC_Os03g52760	kinase, pfkB family, putative, expressed	gene	kinase, pfkB family, putative, expressed	chr3	30237211	30240419	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g28610	KIP1, putative, expressed	gene	KIP1, putative, expressed	chr10	14832962	14840547	-	CDS
3	LOC_Os04g46570	growth regulator related protein, putative, expressed	gene	growth regulator related protein, putative, expressed	chr4	27423284	27427365	-	CDS,three_prime_UTR,five_prime_UTR
3	LOC_Os01g17170	magnesium-protoporphyrin IX monomethyl ester cyclase,chloroplast precursor, putative, expressed	gene	magnesium-protoporphyrin IX monomethyl ester cyclase,chloroplast precursor, putative, expressed	chr1	9873302	9875927	+	three_prime_UTR,downstream
3	LOC_Os07g23740	sterol 3-beta-glucosyltransferase, putative, expressed	gene	sterol 3-beta-glucosyltransferase, putative, expressed	chr7	13398146	13411027	+	CDS
3	LOC_Os10g26990	OsFBK23 - F-box domain and kelch repeat containing protein, expressed	gene	OsFBK23 - F-box domain and kelch repeat containing protein, expressed	chr10	14156839	14160729	-	CDS,three_prime_UTR
3	LOC_Os01g49820	lipid phosphatase protein, putative, expressed	gene	lipid phosphatase protein, putative, expressed	chr1	28604018	28607169	+	CDS,three_prime_UTR
3	LOC_Os02g39160	hydroxymethylbutenyl 4-diphosphate synthase, putative, expressed	gene	hydroxymethylbutenyl 4-diphosphate synthase, putative, expressed	chr2	23647430	23653305	-	CDS
3	LOC_Os04g52590	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr4	31077983	31085786	-	CDS,promoter
3	LOC_Os03g31044	expressed protein	gene	expressed protein	chr3	17679010	17686993	-	three_prime_UTR,CDS
3	LOC_Os11g38670	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr11	22483302	22488559	+	CDS,three_prime_UTR
3	LOC_Os03g25490	cytochrome P450 72A1, putative, expressed	gene	cytochrome P450 72A1, putative, expressed	chr3	14558010	14560532	+	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g06230	galactose mutarotase-like, putative, expressed	gene	galactose mutarotase-like, putative, expressed	chr3	3118827	3122754	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g14490	dehydrogenase-phosphopantetheinyltransferase, putative, expressed	gene	dehydrogenase-phosphopantetheinyltransferase, putative, expressed	chr8	8702803	8707992	+	CDS,three_prime_UTR
3	LOC_Os07g40580	eukaryotic translation initiation factor 5A, putative, expressed	gene	eukaryotic translation initiation factor 5A, putative, expressed	chr7	24316586	24319980	-	CDS,three_prime_UTR
3	LOC_Os09g28810	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr9	17498162	17502055	+	CDS
3	LOC_Os05g34820	expressed protein	gene	expressed protein	chr5	20600468	20606048	+	CDS,three_prime_UTR
3	LOC_Os06g11190	OsPOP13 - Putative Prolyl Oligopeptidase homologue, expressed	gene	OsPOP13 - Putative Prolyl Oligopeptidase homologue, expressed	chr6	5868896	5875422	-	CDS
3	LOC_Os06g21380	OsCttP3 - Putative C-terminal processing peptidase homologue, expressed	gene	OsCttP3 - Putative C-terminal processing peptidase homologue, expressed	chr6	12344921	12349140	+	CDS,three_prime_UTR
3	LOC_Os03g12810	maf, putative, expressed	gene	maf, putative, expressed	chr3	6870765	6874398	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g07880	dynamin family protein, putative, expressed	gene	dynamin family protein, putative, expressed	chr12	3985781	3993486	-	CDS
3	LOC_Os02g22780	T-complex protein, putative, expressed	gene	T-complex protein, putative, expressed	chr2	13560749	13565938	-	CDS
3	LOC_Os02g43590	ELMO/CED-12 family protein, putative, expressed	gene	ELMO/CED-12 family protein, putative, expressed	chr2	26291008	26295465	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g09330	inositol-1-monophosphatase, putative, expressed	gene	inositol-1-monophosphatase, putative, expressed	chr7	4889265	4892670	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g51790	GTPase of unknown function domain containing protein, putative, expressed	gene	GTPase of unknown function domain containing protein, putative, expressed	chr3	29698072	29714974	-	CDS
3	LOC_Os06g35540	aminotransferase, classes I and II, domain containing protein, expressed	gene	aminotransferase, classes I and II, domain containing protein, expressed	chr6	20726095	20730774	-	CDS
3	LOC_Os11g34110	heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed	gene	heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed	chr11	19490695	19497222	-	CDS
3	LOC_Os06g50360	pseudouridine synthase family protein, putative, expressed	gene	pseudouridine synthase family protein, putative, expressed	chr6	30479318	30484252	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g08725	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr12	4455820	4459421	-	CDS,downstream
3	LOC_Os04g51050	OsWAK53b - OsWAK receptor-like protein kinase, expressed	gene	OsWAK53b - OsWAK receptor-like protein kinase, expressed	chr4	30035161	30038861	-	five_prime_UTR,CDS,downstream
3	LOC_Os02g32570	SNF2 family N-terminal domain containing protein, expressed	gene	SNF2 family N-terminal domain containing protein, expressed	chr2	19288603	19297382	+	CDS
3	LOC_Os01g73950	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr1	42836548	42841577	-	three_prime_UTR
3	LOC_Os08g34320	expressed protein	gene	expressed protein	chr8	21534274	21540402	-	three_prime_UTR,promoter
3	LOC_Os07g29450	expressed protein	gene	expressed protein	chr7	17276625	17282642	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g33100	uncharacterized ACR, COG1590 family protein, expressed	gene	uncharacterized ACR, COG1590 family protein, expressed	chr7	19761412	19767582	+	CDS,downstream
3	LOC_Os02g02390	S1 RNA binding domain containing protein, expressed	gene	S1 RNA binding domain containing protein, expressed	chr2	818981	824546	+	CDS
3	LOC_Os02g49480	helix-loop-helix DNA-binding domain containing protein, expressed	gene	helix-loop-helix DNA-binding domain containing protein, expressed	chr2	30227417	30229974	-	CDS
3	LOC_Os04g15820	expressed protein	gene	expressed protein	chr4	8583923	8589613	+	CDS,three_prime_UTR
3	LOC_Os08g26700	expressed protein	gene	expressed protein	chr8	16234748	16237548	-	three_prime_UTR
3	LOC_Os07g09680	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr7	5144086	5147755	-	CDS,three_prime_UTR
3	LOC_Os06g51250	EF hand family protein, putative, expressed	gene	EF hand family protein, putative, expressed	chr6	31012733	31020756	+	CDS,three_prime_UTR
3	LOC_Os03g01710	expressed protein	gene	expressed protein	chr3	439339	446586	+	CDS,three_prime_UTR
3	LOC_Os02g07790	serine/threonine-protein kinase HT1, putative, expressed	gene	serine/threonine-protein kinase HT1, putative, expressed	chr2	4078376	4081528	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g43460	sphingolipid C4-hydroxylase SUR2, putative, expressed	gene	sphingolipid C4-hydroxylase SUR2, putative, expressed	chr7	26013760	26016828	-	CDS,three_prime_UTR,downstream
3	LOC_Os11g40390	expressed protein	gene	expressed protein	chr11	23611572	23616026	-	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os02g22100	OsRhmbd6 - Putative Rhomboid homologue, expressed	gene	OsRhmbd6 - Putative Rhomboid homologue, expressed	chr2	13156572	13164106	+	CDS,three_prime_UTR
3	LOC_Os06g38780	receptor-like protein kinase 2 precursor, putative, expressed	gene	receptor-like protein kinase 2 precursor, putative, expressed	chr6	23016864	23019935	+	CDS
3	LOC_Os07g36490	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr7	21822019	21824260	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g17370	expressed protein	gene	expressed protein	chr2	9988862	9990641	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g46590	expressed protein	gene	expressed protein	chr6	28280182	28284341	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g29720	conserved hypothetical protein	gene	conserved hypothetical protein	chr10	15379766	15383956	+	CDS,downstream
3	LOC_Os04g43140	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr4	25350160	25356286	-	CDS,promoter
3	LOC_Os02g52140	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr2	31910238	31914733	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g13910	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr2	7558777	7568835	-	CDS
3	LOC_Os07g44360	serine/threonine-protein kinase Haspin, putative, expressed	gene	serine/threonine-protein kinase Haspin, putative, expressed	chr7	26503370	26510463	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g06470	suppressor of Mek, putative, expressed	gene	suppressor of Mek, putative, expressed	chr5	3323258	3334824	+	CDS,three_prime_UTR
3	LOC_Os01g70330	prefoldin subunit family protein, expressed	gene	prefoldin subunit family protein, expressed	chr1	40738034	40742717	+	CDS,three_prime_UTR
3	LOC_Os02g53410	expressed protein	gene	expressed protein	chr2	32680208	32680959	-	three_prime_UTR,promoter
3	LOC_Os03g21914	ATP binding protein, putative, expressed	gene	ATP binding protein, putative, expressed	chr3	12532371	12538957	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g46620	WD repeat-containing protein 55, putative, expressed	gene	WD repeat-containing protein 55, putative, expressed	chr7	27849804	27854251	+	CDS,three_prime_UTR
3	LOC_Os02g34190	hypothetical protein	gene	hypothetical protein	chr2	20444676	20448737	+	CDS,downstream
3	LOC_Os06g22690	bundle sheath defective protein 2, putative, expressed	gene	bundle sheath defective protein 2, putative, expressed	chr6	13195297	13197642	-	CDS,three_prime_UTR
3	LOC_Os05g39770	aminotransferase, putative, expressed	gene	aminotransferase, putative, expressed	chr5	23292763	23297472	-	three_prime_UTR,promoter
3	LOC_Os04g58570	C2 domain containing protein, putative, expressed	gene	C2 domain containing protein, putative, expressed	chr4	34639316	34641197	+	CDS,three_prime_UTR
3	LOC_Os04g48270	OsFBX148 - F-box domain containing protein, expressed	gene	OsFBX148 - F-box domain containing protein, expressed	chr4	28565903	28569263	+	CDS,three_prime_UTR
3	LOC_Os02g35690	transcription factor like protein, putative, expressed	gene	transcription factor like protein, putative, expressed	chr2	21443731	21445480	-	three_prime_UTR,promoter
3	LOC_Os05g49420	transcription factor, putative, expressed	gene	transcription factor, putative, expressed	chr5	28272100	28276961	+	CDS,three_prime_UTR
3	LOC_Os04g14170	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr4	7930229	7931045	+	five_prime_UTR,CDS,three_prime_UTR,promoter,downstream
3	LOC_Os09g30411	UBX domain-containing protein, putative, expressed	gene	UBX domain-containing protein, putative, expressed	chr9	18510781	18513352	-	three_prime_UTR,promoter,downstream
3	LOC_Os04g59610	expressed protein	gene	expressed protein	chr4	35258801	35261220	+	three_prime_UTR,CDS,downstream
3	LOC_Os12g03200	MATE efflux family protein, putative, expressed	gene	MATE efflux family protein, putative, expressed	chr12	1219954	1224034	-	three_prime_UTR
3	LOC_Os06g50870	DNL zinc finger domain containing protein, putative, expressed	gene	DNL zinc finger domain containing protein, putative, expressed	chr6	30773116	30775637	-	CDS,three_prime_UTR
3	LOC_Os05g47790	expressed protein	gene	expressed protein	chr5	27320744	27325374	-	CDS,promoter
3	LOC_Os12g31800	glycine-rich RNA-binding protein 7, putative, expressed	gene	glycine-rich RNA-binding protein 7, putative, expressed	chr12	19101360	19105214	+	CDS,three_prime_UTR
3	LOC_Os06g07010	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr6	3321907	3326647	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g48200	B3 DNA binding domain containing protein, putative, expressed	gene	B3 DNA binding domain containing protein, putative, expressed	chr7	28785437	28792010	-	CDS,three_prime_UTR
3	LOC_Os02g07630	copper-transporting ATPase, putative, expressed	gene	copper-transporting ATPase, putative, expressed	chr2	3950375	3955896	-	CDS
3	LOC_Os06g12649	expressed protein	gene	expressed protein	chr6	6904845	6907029	-	three_prime_UTR,promoter
3	LOC_Os02g46080	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr2	28072953	28075904	-	CDS
3	LOC_Os03g63450	snRK1-interacting protein 1, putative, expressed	gene	snRK1-interacting protein 1, putative, expressed	chr3	35838818	35847168	+	CDS,three_prime_UTR
3	LOC_Os11g12320	disease resistance protein RPM1, putative	gene	disease resistance protein RPM1, putative	chr11	6871691	6873163	+	CDS,promoter
3	LOC_Os12g41880	nuclear transcription factor Y subunit, putative, expressed	gene	nuclear transcription factor Y subunit, putative, expressed	chr12	25919868	25923758	-	three_prime_UTR,CDS,promoter
3	LOC_Os12g03070	FHA domain containing protein, putative, expressed	gene	FHA domain containing protein, putative, expressed	chr12	1155635	1157767	+	three_prime_UTR,downstream
3	LOC_Os09g20590	CD2-binding protein-related, putative, expressed	gene	CD2-binding protein-related, putative, expressed	chr9	12406426	12412338	+	CDS
3	LOC_Os04g40840	elongator complex protein 3, putative, expressed	gene	elongator complex protein 3, putative, expressed	chr4	24051943	24055622	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g43820	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr5	25412220	25415603	+	three_prime_UTR
3	LOC_Os02g08500	two-component response regulator, putative, expressed	gene	two-component response regulator, putative, expressed	chr2	4573803	4578360	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g05540	tetratricopeptide repeat containing protein, putative, expressed	gene	tetratricopeptide repeat containing protein, putative, expressed	chr3	2756578	2761240	+	three_prime_UTR,downstream
3	LOC_Os05g19110	expressed protein	gene	expressed protein	chr5	11087589	11090351	+	CDS
3	LOC_Os04g54080	serine/threonine-protein kinase receptor precursor, putative, expressed	gene	serine/threonine-protein kinase receptor precursor, putative, expressed	chr4	32043967	32048532	-	CDS
3	LOC_Os07g33790	glutamate receptor 3.4 precursor, putative, expressed	gene	glutamate receptor 3.4 precursor, putative, expressed	chr7	20220084	20224931	+	three_prime_UTR,downstream
3	LOC_Os09g33780	expressed protein	gene	expressed protein	chr9	19943043	19948240	+	CDS,three_prime_UTR
3	LOC_Os11g04390	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr11	1820360	1827454	+	CDS,five_prime_UTR,three_prime_UTR
3	LOC_Os03g53390	expressed protein	gene	expressed protein	chr3	30625760	30629393	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g01490	kinesin motor domain containing protein, putative, expressed	gene	kinesin motor domain containing protein, putative, expressed	chr7	305009	308744	-	CDS,three_prime_UTR
3	LOC_Os01g07790	polygalacturonase, putative	gene	polygalacturonase, putative	chr1	3736893	3739685	+	CDS,promoter,downstream
3	LOC_Os06g29380	phospholipid-transporting ATPase, putative, expressed	gene	phospholipid-transporting ATPase, putative, expressed	chr6	16792636	16798778	-	CDS
3	LOC_Os01g60060	leucine-rich repeat family protein, putative, expressed	gene	leucine-rich repeat family protein, putative, expressed	chr1	34737278	34742984	+	five_prime_UTR,CDS,promoter
3	LOC_Os06g01440	integral membrane protein, putative, expressed	gene	integral membrane protein, putative, expressed	chr6	265681	270992	+	CDS,downstream
3	LOC_Os05g48160	2Fe-2S iron-sulfur cluster binding domain containing protein, expressed	gene	2Fe-2S iron-sulfur cluster binding domain containing protein, expressed	chr5	27543273	27544905	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g36450	triosephosphate isomerase, chloroplast precursor, putative, expressed	gene	triosephosphate isomerase, chloroplast precursor, putative, expressed	chr9	21032574	21036026	-	three_prime_UTR,CDS,promoter
3	LOC_Os01g56300	expressed protein	gene	expressed protein	chr1	32432040	32438740	+	CDS,three_prime_UTR
3	LOC_Os08g05880	Brix domain containing protein, putative, expressed	gene	Brix domain containing protein, putative, expressed	chr8	3165742	3169556	-	CDS,three_prime_UTR
3	LOC_Os02g06070	phytosulfokine receptor precursor, putative	gene	phytosulfokine receptor precursor, putative	chr2	3028946	3031111	-	CDS
3	LOC_Os07g10720	40S ribosomal protein S15a, putative, expressed	gene	40S ribosomal protein S15a, putative, expressed	chr7	5818719	5820778	-	CDS,three_prime_UTR,downstream
3	LOC_Os08g43370	6-phosphogluconolactonase, putative, expressed	gene	6-phosphogluconolactonase, putative, expressed	chr8	27400725	27403724	+	CDS,promoter
3	LOC_Os03g24070	rhythmically expressed gene 2 protein, putative, expressed	gene	rhythmically expressed gene 2 protein, putative, expressed	chr3	13665622	13668862	+	five_prime_UTR,CDS
3	LOC_Os03g54870	NLI interacting factor-like phosphatase, putative, expressed	gene	NLI interacting factor-like phosphatase, putative, expressed	chr3	31184293	31187266	-	CDS,three_prime_UTR
3	LOC_Os02g33430	E2F family transcription factor protein, putative, expressed	gene	E2F family transcription factor protein, putative, expressed	chr2	19862331	19867439	-	CDS,three_prime_UTR
3	LOC_Os08g45220	expressed protein	gene	expressed protein	chr8	28391241	28396373	+	CDS,three_prime_UTR
3	LOC_Os12g38110	importin subunit beta, putative, expressed	gene	importin subunit beta, putative, expressed	chr12	23369076	23375239	+	CDS,three_prime_UTR
3	LOC_Os11g01460	conserved hypothetical protein	gene	conserved hypothetical protein	chr11	268028	270933	+	CDS,promoter
3	LOC_Os10g25430	Ser/Thr protein phosphatase family protein, putative, expressed	gene	Ser/Thr protein phosphatase family protein, putative, expressed	chr10	13079651	13082761	-	CDS,promoter
3	LOC_Os03g51830	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr3	29717323	29722944	+	CDS,three_prime_UTR
3	LOC_Os08g37800	CAMK_KIN1/SNF1/Nim1_like_AMPKh.4 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_KIN1/SNF1/Nim1_like_AMPKh.4 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr8	23939523	23944697	+	CDS,three_prime_UTR
3	LOC_Os08g32090	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr8	19895856	19905030	-	CDS,three_prime_UTR
3	LOC_Os01g70430	oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed	gene	oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed	chr1	40793081	40795934	-	CDS
3	LOC_Os08g04150	RNA polymerase II complex component SRB7, putative, expressed	gene	RNA polymerase II complex component SRB7, putative, expressed	chr8	2012239	2014566	-	three_prime_UTR,promoter
3	LOC_Os11g02730	harpin-induced protein 1 domain containing protein, expressed	gene	harpin-induced protein 1 domain containing protein, expressed	chr11	885243	886579	-	three_prime_UTR,promoter
3	LOC_Os10g31810	expressed protein	gene	expressed protein	chr10	16604284	16606647	+	three_prime_UTR
3	LOC_Os02g06490	vacuolar protein sorting-associated protein 4, putative, expressed	gene	vacuolar protein sorting-associated protein 4, putative, expressed	chr2	3234307	3237981	+	three_prime_UTR,downstream
3	LOC_Os12g05900	rhoGAP domain containing protein, expressed	gene	rhoGAP domain containing protein, expressed	chr12	2707477	2713089	-	CDS,five_prime_UTR
3	LOC_Os03g07310	growth regulator related protein, putative, expressed	gene	growth regulator related protein, putative, expressed	chr3	3712487	3720101	-	CDS,promoter
3	LOC_Os03g39655	expressed protein	gene	expressed protein	chr3	22052334	22054938	-	CDS
3	LOC_Os11g33110	Cupin domain containing protein, expressed	gene	Cupin domain containing protein, expressed	chr11	19119355	19120188	+	five_prime_UTR,CDS,promoter
3	LOC_Os09g21780	expressed protein	gene	expressed protein	chr9	13184202	13190511	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g06630	OsFBT14 - F-box and tubby domain containing protein, expressed	gene	OsFBT14 - F-box and tubby domain containing protein, expressed	chr12	3211526	3216728	-	CDS,three_prime_UTR,downstream
3	LOC_Os07g44170	pentatricopeptide repeat domain containing protein, putative	gene	pentatricopeptide repeat domain containing protein, putative	chr7	26396501	26398618	+	CDS
3	LOC_Os02g38470	B3 DNA binding domain containing protein, expressed	gene	B3 DNA binding domain containing protein, expressed	chr2	23249217	23256428	-	CDS
3	LOC_Os05g02500	dual specificity protein phosphatase, putative, expressed	gene	dual specificity protein phosphatase, putative, expressed	chr5	858276	862741	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g19140	adenylate kinase family protein, putative, expressed	gene	adenylate kinase family protein, putative, expressed	chr8	11441528	11452900	-	CDS
3	LOC_Os03g56460	glucose-6-phosphate isomerase, putative, expressed	gene	glucose-6-phosphate isomerase, putative, expressed	chr3	32168010	32174978	+	CDS
3	LOC_Os02g35070	SPRY-domain containing protein, putative, expressed	gene	SPRY-domain containing protein, putative, expressed	chr2	21037966	21044626	-	CDS,three_prime_UTR
3	LOC_Os08g36010	OsFBX295 - F-box domain containing protein, expressed	gene	OsFBX295 - F-box domain containing protein, expressed	chr8	22689638	22691641	-	three_prime_UTR,promoter
3	LOC_Os11g11550	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr11	6415597	6420102	-	CDS
3	LOC_Os06g10760	emp24/gp25L/p24 family protein, putative, expressed	gene	emp24/gp25L/p24 family protein, putative, expressed	chr6	5618106	5620751	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g11750	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr2	6062276	6066769	+	CDS
3	LOC_Os12g05740	expressed protein	gene	expressed protein	chr12	2646702	2649299	+	CDS,downstream
3	LOC_Os04g32330	dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor, putative, expressed	gene	dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor, putative, expressed	chr4	19206320	19210816	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g23720	expressed protein	gene	expressed protein	chr9	14094778	14098965	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g38980	bromodomain domain containing protein, expressed	gene	bromodomain domain containing protein, expressed	chr2	23543305	23548513	-	three_prime_UTR,CDS
3	LOC_Os03g39020	Kinesin motor domain domain containing protein, expressed	gene	Kinesin motor domain domain containing protein, expressed	chr3	21685761	21691672	-	CDS,three_prime_UTR
3	LOC_Os07g26490	ankyrin repeat domain containing protein, expressed	gene	ankyrin repeat domain containing protein, expressed	chr7	15236173	15242050	-	CDS
3	LOC_Os08g01310	phospholipase C, putative, expressed	gene	phospholipase C, putative, expressed	chr8	194813	199431	-	CDS,downstream
3	LOC_Os03g06860	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr3	3470173	3472584	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g35560	OsFBX53 - F-box domain containing protein, expressed	gene	OsFBX53 - F-box domain containing protein, expressed	chr2	21390417	21393861	-	CDS
3	LOC_Os06g11170	formin-binding protein-related, putative, expressed	gene	formin-binding protein-related, putative, expressed	chr6	5856236	5860127	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g68310	sas10/Utp3 family protein	gene	sas10/Utp3 family protein	chr1	39683879	39685964	-	CDS,promoter,downstream
3	LOC_Os01g01560	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr1	283911	291118	-	five_prime_UTR
3	LOC_Os02g39840	eukaryotic initiation factor iso-4F subunit p82-34, putative, expressed	gene	eukaryotic initiation factor iso-4F subunit p82-34, putative, expressed	chr2	24062464	24068908	-	three_prime_UTR,CDS,promoter
3	LOC_Os04g13220	ABC transporter family protein, putative, expressed	gene	ABC transporter family protein, putative, expressed	chr4	7312502	7321058	-	CDS
3	LOC_Os01g51640	expressed protein	gene	expressed protein	chr1	29678045	29681965	-	CDS,three_prime_UTR
3	LOC_Os12g08820	growth regulator related protein, putative, expressed	gene	growth regulator related protein, putative, expressed	chr12	4550079	4555264	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g12800	elongation factor 1-gamma, putative, expressed	gene	elongation factor 1-gamma, putative, expressed	chr2	6721987	6726018	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g25604	unknown	gene	unknown	chr2	14960838	14963252	+	five_prime_UTR,CDS,three_prime_UTR,downstream
3	LOC_Os08g02350	expressed protein	gene	expressed protein	chr8	905523	922377	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g08610	leucine-rich repeat family protein, putative, expressed	gene	leucine-rich repeat family protein, putative, expressed	chr3	4433562	4437097	+	CDS,three_prime_UTR
3	LOC_Os04g42340	expressed protein	gene	expressed protein	chr4	24871523	24873832	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g12980	UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed	gene	UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed	chr4	7159018	7161676	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g37580	modifier of rudimentary protein, expressed	gene	modifier of rudimentary protein, expressed	chr3	20840684	20845392	-	CDS,three_prime_UTR
3	LOC_Os04g42600	polyadenylate-binding protein, putative, expressed	gene	polyadenylate-binding protein, putative, expressed	chr4	25008886	25016133	-	CDS
3	LOC_Os12g42260	initiation factor 2 subunit family domain containing protein, expressed	gene	initiation factor 2 subunit family domain containing protein, expressed	chr12	26180352	26188203	-	CDS,three_prime_UTR
3	LOC_Os01g50030	CPuORF25 - conserved peptide uORF-containing transcript, expressed	gene	CPuORF25 - conserved peptide uORF-containing transcript, expressed	chr1	28738942	28743717	+	CDS
3	LOC_Os05g16660	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr5	9448729	9454428	+	CDS,three_prime_UTR
3	LOC_Os09g15820	aldose 1-epimerase, putative, expressed	gene	aldose 1-epimerase, putative, expressed	chr9	9654423	9658126	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g41810	reductase, putative, expressed	gene	reductase, putative, expressed	chr6	25072545	25075552	-	CDS
3	LOC_Os01g72890	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr1	42274499	42279523	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g51570	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	chr2	31585352	31587283	+	three_prime_UTR
3	LOC_Os08g09870	expressed protein	gene	expressed protein	chr8	5695659	5697869	-	CDS,promoter
3	LOC_Os06g04690	OsFBX184 - F-box domain containing protein, expressed	gene	OsFBX184 - F-box domain containing protein, expressed	chr6	2042433	2047418	-	CDS
3	LOC_Os05g32570	RING E3 ligase protein, putative, expressed	gene	RING E3 ligase protein, putative, expressed	chr5	18993051	18999837	-	CDS
3	LOC_Os04g49490	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr4	29329914	29333302	-	CDS,five_prime_UTR
3	LOC_Os05g39410	expressed protein	gene	expressed protein	chr5	23050083	23054720	-	CDS,three_prime_UTR
3	LOC_Os11g38860	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr11	22662360	22668023	+	three_prime_UTR,downstream
3	LOC_Os08g42760	methyltransferase domain containing protein, expressed	gene	methyltransferase domain containing protein, expressed	chr8	27062110	27065468	+	CDS,three_prime_UTR,promoter
3	LOC_Os01g14820	expressed protein	gene	expressed protein	chr1	8283418	8288120	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os09g34850	POLD4A - Putative DNA polymerase delta complex subunit, expressed	gene	POLD4A - Putative DNA polymerase delta complex subunit, expressed	chr9	20313086	20315233	-	CDS,three_prime_UTR
3	LOC_Os08g44290	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr8	27876876	27879470	-	three_prime_UTR,promoter
3	LOC_Os01g40200	XIK, putative, expressed	gene	XIK, putative, expressed	chr1	22682498	22686999	-	CDS
3	LOC_Os01g06600	glutaryl-CoA dehydrogenase, mitochondrial precursor, putative, expressed	gene	glutaryl-CoA dehydrogenase, mitochondrial precursor, putative, expressed	chr1	3107117	3112963	-	CDS
3	LOC_Os09g21360	expressed protein	gene	expressed protein	chr9	12891954	12896016	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g04400	pentatricopeptide repeat domain containing protein, putative, expressed	gene	pentatricopeptide repeat domain containing protein, putative, expressed	chr8	2153472	2158039	+	three_prime_UTR,downstream
3	LOC_Os12g06650	tetratricopeptide-like helical, putative, expressed	gene	tetratricopeptide-like helical, putative, expressed	chr12	3225522	3228147	-	CDS,three_prime_UTR
3	LOC_Os09g17049	expressed protein	gene	expressed protein	chr9	10447413	10451767	+	five_prime_UTR,CDS,three_prime_UTR
3	LOC_Os07g28840	SET domain containing protein, expressed	gene	SET domain containing protein, expressed	chr7	16885908	16889406	+	CDS
3	LOC_Os01g59819	Os1bglu2 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed	gene	Os1bglu2 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed	chr1	34587784	34601389	-	CDS
3	LOC_Os06g15700	expressed protein	gene	expressed protein	chr6	8889919	8902223	+	CDS
3	LOC_Os11g43750	polygalacturonase, putative, expressed	gene	polygalacturonase, putative, expressed	chr11	25948435	25952347	-	CDS
3	LOC_Os03g62430	OsWAK28 - OsWAK receptor-like protein kinase, expressed	gene	OsWAK28 - OsWAK receptor-like protein kinase, expressed	chr3	35353602	35358035	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g43570	peptidase, T1 family, putative, expressed	gene	peptidase, T1 family, putative, expressed	chr6	26198323	26203626	-	CDS,three_prime_UTR
3	LOC_Os11g08314	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr11	4376687	4383849	+	three_prime_UTR,promoter,downstream
3	LOC_Os12g13590	exocyst complex component 5, putative, expressed	gene	exocyst complex component 5, putative, expressed	chr12	7627628	7641698	-	CDS
3	LOC_Os11g10040	mTERF family protein, expressed	gene	mTERF family protein, expressed	chr11	5368386	5371359	+	three_prime_UTR
3	LOC_Os12g23190	tyrosine phosphatase family protein, putative, expressed	gene	tyrosine phosphatase family protein, putative, expressed	chr12	13108419	13111498	+	CDS
3	LOC_Os04g56790	TLD family protein, putative, expressed	gene	TLD family protein, putative, expressed	chr4	33683962	33687792	-	CDS,downstream
3	LOC_Os03g10820	expressed protein	gene	expressed protein	chr3	5546033	5550372	-	CDS,three_prime_UTR
3	LOC_Os02g34810	OsAPx8 - Thylakoid-bound Ascorbate Peroxidase encoding gene 5,8, expressed	gene	OsAPx8 - Thylakoid-bound Ascorbate Peroxidase encoding gene 5,8, expressed	chr2	20862392	20866211	-	CDS
3	LOC_Os11g40540	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr11	23718480	23725200	+	CDS,three_prime_UTR
3	LOC_Os11g04890	ASH-like SPRY domain containing protein, putative, expressed	gene	ASH-like SPRY domain containing protein, putative, expressed	chr11	2073422	2075952	+	CDS,promoter,downstream
3	LOC_Os09g30466	nuclear ribonuclease Z, putative, expressed	gene	nuclear ribonuclease Z, putative, expressed	chr9	18564964	18568124	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g49960	expressed protein	gene	expressed protein	chr3	28467187	28476724	-	CDS,promoter
3	LOC_Os11g31650	expressed protein	gene	expressed protein	chr11	18042944	18046486	+	five_prime_UTR,CDS,three_prime_UTR,promoter
3	LOC_Os08g33640	expressed protein	gene	expressed protein	chr8	21008001	21010911	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g09150	expressed protein	gene	expressed protein	chr7	4773604	4775612	-	three_prime_UTR,promoter
3	LOC_Os09g25550	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr9	15327753	15331300	+	CDS,downstream
3	LOC_Os02g44370	scarecrow, putative, expressed	gene	scarecrow, putative, expressed	chr2	26846210	26849195	+	three_prime_UTR,downstream
3	LOC_Os10g39790	CorA-like magnesium transporter protein, putative, expressed	gene	CorA-like magnesium transporter protein, putative, expressed	chr10	21226889	21230206	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os02g47560	DNA-binding protein, putative, expressed	gene	DNA-binding protein, putative, expressed	chr2	29053412	29056754	-	CDS,three_prime_UTR
3	LOC_Os02g29380	expressed protein	gene	expressed protein	chr2	17440484	17449289	+	CDS,promoter
3	LOC_Os07g22220	F-box-like/WD repeat-containing protein TBL1XR1-A, putative, expressed	gene	F-box-like/WD repeat-containing protein TBL1XR1-A, putative, expressed	chr7	12423067	12439493	+	CDS,three_prime_UTR
3	LOC_Os05g02880	splicing factor, arginine/serine-rich 7, putative, expressed	gene	splicing factor, arginine/serine-rich 7, putative, expressed	chr5	1045861	1049349	-	CDS
3	LOC_Os05g25210	expressed protein	gene	expressed protein	chr5	14556841	14562484	+	CDS
3	LOC_Os09g30280	glycosyl transferase 8 domain containing protein, putative, expressed	gene	glycosyl transferase 8 domain containing protein, putative, expressed	chr9	18440075	18444159	+	three_prime_UTR,downstream
3	LOC_Os05g09370	kinase, pfkB family, putative, expressed	gene	kinase, pfkB family, putative, expressed	chr5	5254224	5262130	-	CDS
3	LOC_Os03g49940	integral membrane protein, putative, expressed	gene	integral membrane protein, putative, expressed	chr3	28463605	28466726	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g73840	expressed protein	gene	expressed protein	chr1	42773790	42777581	-	CDS
3	LOC_Os09g17870	cytidylyltransferase domain containing protein, expressed	gene	cytidylyltransferase domain containing protein, expressed	chr9	10927395	10929717	-	three_prime_UTR,promoter
3	LOC_Os11g38870	helix-loop-helix DNA-binding domain containing protein, expressed	gene	helix-loop-helix DNA-binding domain containing protein, expressed	chr11	22666135	22671469	-	CDS
3	LOC_Os08g38700	C3-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C3 subfamily conserved sequence, expressed	gene	C3-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C3 subfamily conserved sequence, expressed	chr8	24461610	24465257	+	CDS,three_prime_UTR
3	LOC_Os08g01420	PHD-finger domain containing protein, putative, expressed	gene	PHD-finger domain containing protein, putative, expressed	chr8	271854	275978	-	CDS,three_prime_UTR,downstream
3	LOC_Os01g02690	resistance-related receptor-like kinase, putative	gene	resistance-related receptor-like kinase, putative	chr1	914639	918674	+	CDS
3	LOC_Os12g07190	CBS domain-containing protein, putative, expressed	gene	CBS domain-containing protein, putative, expressed	chr12	3530358	3535425	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g03130	E2F-related protein, putative, expressed	gene	E2F-related protein, putative, expressed	chr11	1127554	1129426	+	CDS,three_prime_UTR,downstream
3	LOC_Os10g03660	OsFBX345 - F-box domain containing protein, expressed	gene	OsFBX345 - F-box domain containing protein, expressed	chr10	1621199	1634935	-	CDS
3	LOC_Os01g70940	potassium transporter, putative, expressed	gene	potassium transporter, putative, expressed	chr1	41060048	41066484	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g55630	COBW domain containing protein, putative, expressed	gene	COBW domain containing protein, putative, expressed	chr2	34065159	34069638	+	CDS,three_prime_UTR,downstream
3	LOC_Os06g06090	CGMC_MAPKCMGC_2_ERK.12 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	gene	CGMC_MAPKCMGC_2_ERK.12 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	chr6	2805544	2812005	-	CDS,three_prime_UTR,promoter
3	LOC_Os11g32940	OsFBX421 - F-box domain containing protein, expressed	gene	OsFBX421 - F-box domain containing protein, expressed	chr11	18982697	18987554	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g05320	expressed protein	gene	expressed protein	chr12	2388855	2394296	+	three_prime_UTR
3	LOC_Os01g04550	expressed protein	gene	expressed protein	chr1	2035118	2037198	+	five_prime_UTR,CDS
3	LOC_Os07g41710	expressed protein	gene	expressed protein	chr7	24992927	24995387	+	CDS,downstream
3	LOC_Os06g05720	expressed protein	gene	expressed protein	chr6	2582843	2585241	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g09260	tRNA synthetase, putative	gene	tRNA synthetase, putative	chr8	5378313	5383026	-	CDS
3	LOC_Os02g51150	sphingolipid C4-hydroxylase SUR2, putative, expressed	gene	sphingolipid C4-hydroxylase SUR2, putative, expressed	chr2	31293702	31296089	+	three_prime_UTR,promoter,downstream
3	LOC_Os01g12290	S-locus lectin protein kinase family protein, putative	gene	S-locus lectin protein kinase family protein, putative	chr1	6710815	6713142	+	CDS
3	LOC_Os03g22060	uroporphyrinogen decarboxylase, putative, expressed	gene	uroporphyrinogen decarboxylase, putative, expressed	chr3	12641783	12645519	-	CDS
3	LOC_Os10g25030	red chlorophyll catabolite reductase, putative, expressed	gene	red chlorophyll catabolite reductase, putative, expressed	chr10	12815146	12817117	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g10110	expressed protein	gene	expressed protein	chr7	5417767	5425573	-	CDS,three_prime_UTR
3	LOC_Os12g37760	RGH1A, putative, expressed	gene	RGH1A, putative, expressed	chr12	23149023	23154976	+	CDS
3	LOC_Os11g09979	expressed protein	gene	expressed protein	chr11	5344937	5350673	+	three_prime_UTR,downstream
3	LOC_Os11g25090	hypothetical protein	gene	hypothetical protein	chr11	13838273	13838785	+	CDS,promoter,downstream
3	LOC_Os11g43810	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr11	25993152	25994159	+	CDS,downstream
3	LOC_Os11g28270	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	gene	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	chr11	15784331	15793852	-	three_prime_UTR,CDS
3	LOC_Os02g52610	xyloglucan fucosyltransferase, putative, expressed	gene	xyloglucan fucosyltransferase, putative, expressed	chr2	32173486	32181562	+	CDS
3	LOC_Os10g13670	Zinc finger, C3HC4 type domain containing protein, expressed	gene	Zinc finger, C3HC4 type domain containing protein, expressed	chr10	7429912	7435232	-	CDS,three_prime_UTR
3	LOC_Os09g33986	peptidase, T1 family, putative, expressed	gene	peptidase, T1 family, putative, expressed	chr9	20066476	20069032	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os07g46310	magnesium-chelatase, putative	gene	magnesium-chelatase, putative	chr7	27623191	27625745	-	CDS,promoter,downstream
3	LOC_Os07g13890	OsFBX230 - F-box domain containing protein, expressed	gene	OsFBX230 - F-box domain containing protein, expressed	chr7	7941761	7943927	+	CDS,three_prime_UTR
3	LOC_Os08g03430	extracellular ligand-gated ion channel, putative, expressed	gene	extracellular ligand-gated ion channel, putative, expressed	chr8	1605301	1610099	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os11g03160	glycosyl transferase, family 8, putative, expressed	gene	glycosyl transferase, family 8, putative, expressed	chr11	1135057	1140412	-	CDS,three_prime_UTR
3	LOC_Os03g62180	lectin protein kinase family protein, putative, expressed	gene	lectin protein kinase family protein, putative, expressed	chr3	35211831	35215806	-	three_prime_UTR,promoter
3	LOC_Os01g69080	acyl-desaturase, chloroplast precursor, putative, expressed	gene	acyl-desaturase, chloroplast precursor, putative, expressed	chr1	40145464	40149790	-	CDS,three_prime_UTR
3	LOC_Os03g12720	expressed protein	gene	expressed protein	chr3	6785668	6789158	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g59450	transporter-related, putative, expressed	gene	transporter-related, putative, expressed	chr3	33830812	33834624	-	CDS,three_prime_UTR
3	LOC_Os06g21390	Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed	gene	Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed	chr6	12351311	12357105	+	CDS,three_prime_UTR
3	LOC_Os02g15580	cyclic nucleotide-gated ion channel 1, putative, expressed	gene	cyclic nucleotide-gated ion channel 1, putative, expressed	chr2	8746950	8756040	-	three_prime_UTR,CDS
3	LOC_Os06g04970	expressed protein	gene	expressed protein	chr6	2188914	2193839	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g17180	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr3	9556395	9565462	-	CDS,three_prime_UTR
3	LOC_Os08g31700	UNE2, putative, expressed	gene	UNE2, putative, expressed	chr8	19645033	19647034	+	CDS,downstream
3	LOC_Os03g60360	protein kinase PKN/PRK1, effector, putative, expressed	gene	protein kinase PKN/PRK1, effector, putative, expressed	chr3	34320161	34325702	+	CDS,three_prime_UTR
3	LOC_Os02g52880	ybaK/prolyl-tRNA synthetase family protein, putative, expressed	gene	ybaK/prolyl-tRNA synthetase family protein, putative, expressed	chr2	32320211	32324266	-	CDS,three_prime_UTR
3	LOC_Os09g25640	5-nucleotidase domain-containing protein, putative, expressed	gene	5-nucleotidase domain-containing protein, putative, expressed	chr9	15399687	15405413	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g29190	PDI, putative, expressed	gene	PDI, putative, expressed	chr3	16588832	16594636	+	CDS
3	LOC_Os06g13030	OsLIM - LIM domain protein, putative actin-binding protein and transcription factor, expressed	gene	OsLIM - LIM domain protein, putative actin-binding protein and transcription factor, expressed	chr6	7132790	7139004	-	CDS,three_prime_UTR
3	LOC_Os10g35570	expressed protein	gene	expressed protein	chr10	18956677	18962180	+	CDS
3	LOC_Os02g49090	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr2	30010127	30020066	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g39390	outer membrane protein, OMP85 family protein, expressed	gene	outer membrane protein, OMP85 family protein, expressed	chr5	23041638	23047339	-	CDS,three_prime_UTR
3	LOC_Os12g07590	Protein-tyrosine phosphatase domain containing protein, expressed	gene	Protein-tyrosine phosphatase domain containing protein, expressed	chr12	3791109	3796496	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g44280	protein-L-isoaspartate O-methyltransferase, putative, expressed	gene	protein-L-isoaspartate O-methyltransferase, putative, expressed	chr8	27874629	27877968	+	CDS,three_prime_UTR
3	LOC_Os11g36410	NBS-LRR type disease resistance protein, putative, expressed	gene	NBS-LRR type disease resistance protein, putative, expressed	chr11	21002628	21006037	-	CDS
3	LOC_Os03g22450	auxin response factor 75, putative, expressed	gene	auxin response factor 75, putative, expressed	chr3	12863946	12868010	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g42730	expressed protein	gene	expressed protein	chr10	22983619	22986561	+	three_prime_UTR,promoter
3	LOC_Os10g07270	ubiquitin carboxyl-terminal hydrolase 5, putative, expressed	gene	ubiquitin carboxyl-terminal hydrolase 5, putative, expressed	chr10	3830480	3840431	-	CDS,three_prime_UTR
3	LOC_Os12g19290	AGC_AGC_other_NDRh_TRCd.4 - ACG kinases include homologs to PKA, PKG and PKC, expressed	gene	AGC_AGC_other_NDRh_TRCd.4 - ACG kinases include homologs to PKA, PKG and PKC, expressed	chr12	11182007	11189076	+	CDS
3	LOC_Os04g23040	expressed protein	gene	expressed protein	chr4	13076998	13079715	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g50980	SET domain containing protein, expressed	gene	SET domain containing protein, expressed	chr5	29188987	29193299	+	CDS,three_prime_UTR,downstream
3	LOC_Os09g38080	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr9	21941524	21944802	+	CDS
3	LOC_Os05g30700	expressed protein	gene	expressed protein	chr5	17719366	17721297	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g14330	aldose 1-epimerase, putative, expressed	gene	aldose 1-epimerase, putative, expressed	chr8	8588041	8593482	-	CDS,three_prime_UTR
3	LOC_Os07g14580	mRNA-decapping enzyme, putative, expressed	gene	mRNA-decapping enzyme, putative, expressed	chr7	8315330	8320435	+	CDS,three_prime_UTR,downstream
3	LOC_Os03g03450	anthranilate phosphoribosyltransferase, chloroplast precursor, putative, expressed	gene	anthranilate phosphoribosyltransferase, chloroplast precursor, putative, expressed	chr3	1484600	1489667	-	CDS,three_prime_UTR
3	LOC_Os08g33900	CAAX amino terminal protease family protein, putative	gene	CAAX amino terminal protease family protein, putative	chr8	21205967	21208757	+	CDS,downstream
3	LOC_Os02g43470	glutamate dehydrogenase protein, putative, expressed	gene	glutamate dehydrogenase protein, putative, expressed	chr2	26234257	26237114	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g39960	40S ribosomal protein S26, putative, expressed	gene	40S ribosomal protein S26, putative, expressed	chr5	23420499	23423202	-	CDS
3	LOC_Os08g02340	60S acidic ribosomal protein, putative, expressed	gene	60S acidic ribosomal protein, putative, expressed	chr8	903114	904712	+	three_prime_UTR,downstream
3	LOC_Os03g13274	peptide transporter PTR2, putative, expressed	gene	peptide transporter PTR2, putative, expressed	chr3	7162369	7167863	-	CDS,three_prime_UTR
3	LOC_Os01g25710	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr1	14570811	14580124	-	CDS
3	LOC_Os08g01130	flap endonuclease, putative, expressed	gene	flap endonuclease, putative, expressed	chr8	86245	90948	-	CDS
3	LOC_Os07g33480	cytochrome P450 domain containing protein, expressed	gene	cytochrome P450 domain containing protein, expressed	chr7	20011741	20014651	+	CDS,three_prime_UTR
3	LOC_Os05g07710	WD40-like domain containing protein, putative, expressed	gene	WD40-like domain containing protein, putative, expressed	chr5	4144879	4149022	+	CDS,promoter
3	LOC_Os12g03880	60S acidic ribosomal protein P0, putative, expressed	gene	60S acidic ribosomal protein P0, putative, expressed	chr12	1600954	1603462	-	CDS,three_prime_UTR,promoter
3	LOC_Os12g39380	BTBN24 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed	gene	BTBN24 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed	chr12	24184812	24191416	-	CDS,promoter
3	LOC_Os05g40920	expressed protein	gene	expressed protein	chr5	23937687	23940027	-	CDS
3	LOC_Os01g41780	expressed protein	gene	expressed protein	chr1	23647221	23650455	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g32430	oxidoreductase, putative, expressed	gene	oxidoreductase, putative, expressed	chr9	19357507	19360585	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g59560	protein kinase domain containing protein	gene	protein kinase domain containing protein	chr1	34436219	34443334	-	CDS
3	LOC_Os02g02670	NBS-LRR disease resistance protein, putative	gene	NBS-LRR disease resistance protein, putative	chr2	988442	995506	+	CDS,downstream
3	LOC_Os11g41875	membrane protein, putative, expressed	gene	membrane protein, putative, expressed	chr11	24711624	24714112	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g33110	CAMK_CAMK_like.33 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.33 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr7	19768012	19773511	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g06530	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr1	3077707	3081336	+	CDS,downstream
3	LOC_Os04g35864	DDT domain-containing protein, putative, expressed	gene	DDT domain-containing protein, putative, expressed	chr4	21684952	21686729	-	CDS,three_prime_UTR,five_prime_UTR
3	LOC_Os01g51010	DUF292 domain containing protein, expressed	gene	DUF292 domain containing protein, expressed	chr1	29305403	29311573	+	CDS,three_prime_UTR
3	LOC_Os03g48260	expressed protein	gene	expressed protein	chr3	27451337	27456623	+	CDS,three_prime_UTR
3	LOC_Os08g07390	mla1, putative, expressed	gene	mla1, putative, expressed	chr8	4146051	4149001	-	five_prime_UTR,CDS,downstream
3	LOC_Os04g58910	receptor protein kinase TMK1 precursor, putative, expressed	gene	receptor protein kinase TMK1 precursor, putative, expressed	chr4	34854803	34858678	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g36570	expressed protein	gene	expressed protein	chr4	21906482	21908723	+	three_prime_UTR
3	LOC_Os02g38350	Regulator of chromosome condensation domain containing protein, expressed	gene	Regulator of chromosome condensation domain containing protein, expressed	chr2	23177233	23180606	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g48370	OsFBT1 - F-box and tubby domain containing protein, expressed	gene	OsFBT1 - F-box and tubby domain containing protein, expressed	chr1	27715144	27720173	-	CDS,three_prime_UTR
3	LOC_Os12g22010	hypothetical protein	gene	hypothetical protein	chr12	12373402	12379066	-	CDS
3	LOC_Os02g05400	transmembrane protein 15, putative, expressed	gene	transmembrane protein 15, putative, expressed	chr2	2593931	2598354	-	CDS,promoter,downstream
3	LOC_Os06g06870	zinc finger protein, putative, expressed	gene	zinc finger protein, putative, expressed	chr6	3249463	3260365	-	CDS
3	LOC_Os07g09690	galactosyltransferase family protein, putative, expressed	gene	galactosyltransferase family protein, putative, expressed	chr7	5150367	5154562	-	CDS,three_prime_UTR,promoter
3	LOC_Os08g39100	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr8	24697428	24702090	-	CDS
3	LOC_Os12g10710	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr12	5739523	5751976	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g05710	pollen-specific protein, putative, expressed	gene	pollen-specific protein, putative, expressed	chr6	2581783	2582618	+	CDS,promoter,downstream
3	LOC_Os05g44060	expressed protein	gene	expressed protein	chr5	25561444	25562289	+	three_prime_UTR,promoter,downstream
3	LOC_Os03g02514	hydrolase, alpha/beta fold family protein, putative, expressed	gene	hydrolase, alpha/beta fold family protein, putative, expressed	chr3	921682	927188	+	CDS
3	LOC_Os07g37140	expressed protein	gene	expressed protein	chr7	22246634	22251845	+	CDS
3	LOC_Os09g34090	sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed	gene	sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed	chr9	20116959	20121252	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g60950	expressed protein	gene	expressed protein	chr3	34626461	34628134	-	three_prime_UTR,CDS,promoter
3	LOC_Os04g46730	thioesterase family protein, putative, expressed	gene	thioesterase family protein, putative, expressed	chr4	27515717	27517635	-	CDS,three_prime_UTR
3	LOC_Os02g36740	zinc finger, C3HC4 type, putative, expressed	gene	zinc finger, C3HC4 type, putative, expressed	chr2	22157393	22161514	-	CDS,three_prime_UTR
3	LOC_Os05g11630	expressed protein	gene	expressed protein	chr5	6590632	6594977	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g35040	2,3-bisphosphoglycerate-independent phosphoglycerate mutase, putative, expressed	gene	2,3-bisphosphoglycerate-independent phosphoglycerate mutase, putative, expressed	chr12	21291319	21294199	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g04690	UDP-arabinose 4-epimerase 1, putative, expressed	gene	UDP-arabinose 4-epimerase 1, putative, expressed	chr7	2079001	2082533	+	CDS,three_prime_UTR,downstream
3	LOC_Os04g53540	homeobox and START domains containing protein, putative, expressed	gene	homeobox and START domains containing protein, putative, expressed	chr4	31714613	31722017	-	three_prime_UTR,promoter
3	LOC_Os06g39230	aldehyde dehydrogenase, putative, expressed	gene	aldehyde dehydrogenase, putative, expressed	chr6	23288527	23291318	+	CDS,promoter
3	LOC_Os06g07780	vesicle-associated membrane protein, putative, expressed	gene	vesicle-associated membrane protein, putative, expressed	chr6	3772668	3775567	-	CDS,three_prime_UTR,promoter
3	LOC_Os02g02810	expressed protein	gene	expressed protein	chr2	1069017	1072090	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g02600	Ser/Thr receptor-like kinase, putative, expressed	gene	Ser/Thr receptor-like kinase, putative, expressed	chr1	864966	868063	+	CDS,promoter
3	LOC_Os01g51840	IQ calmodulin-binding motif family protein, putative, expressed	gene	IQ calmodulin-binding motif family protein, putative, expressed	chr1	29800036	29805925	-	CDS
3	LOC_Os09g17840	protein transport protein Sec61 subunit alpha, putative	gene	protein transport protein Sec61 subunit alpha, putative	chr9	10914826	10917169	-	CDS,promoter
3	LOC_Os02g56740	translation initiation factor eIF-2B subunit epsilon, putative, expressed	gene	translation initiation factor eIF-2B subunit epsilon, putative, expressed	chr2	34778287	34787518	+	CDS,three_prime_UTR
3	LOC_Os12g18900	aminotransferase, putative, expressed	gene	aminotransferase, putative, expressed	chr12	10960706	10971736	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g03676	CAMK_CAMK_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr6	1437382	1444164	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g43510	expressed protein	gene	expressed protein	chr3	24269483	24275984	-	CDS,three_prime_UTR
3	LOC_Os02g05810	expressed protein	gene	expressed protein	chr2	2865046	2869031	+	three_prime_UTR,downstream
3	LOC_Os01g07720	dolichyl-P-Man Man-PP-dolichyl mannosyltransferase, putative, expressed	gene	dolichyl-P-Man Man-PP-dolichyl mannosyltransferase, putative, expressed	chr1	3704420	3708016	-	CDS,three_prime_UTR
3	LOC_Os05g45590	hexokinase, putative, expressed	gene	hexokinase, putative, expressed	chr5	26355984	26359919	-	CDS,three_prime_UTR
3	LOC_Os06g49790	acyltransferase, putative, expressed	gene	acyltransferase, putative, expressed	chr6	30121821	30127029	+	CDS,downstream
3	LOC_Os03g15590	eukaryotic translation initiation factor, putative, expressed	gene	eukaryotic translation initiation factor, putative, expressed	chr3	8596266	8599449	-	CDS,promoter
3	LOC_Os11g31880	phosphoglycerate mutase, putative, expressed	gene	phosphoglycerate mutase, putative, expressed	chr11	18262778	18267243	+	CDS,three_prime_UTR,downstream
3	LOC_Os08g01110	expressed protein	gene	expressed protein	chr8	77198	83427	+	three_prime_UTR
3	LOC_Os07g46290	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	27618020	27619576	-	CDS,promoter
3	LOC_Os04g24180	heat shock protein binding protein, putative, expressed	gene	heat shock protein binding protein, putative, expressed	chr4	13825415	13831979	+	CDS
3	LOC_Os02g05980	phytosulfokine receptor precursor, putative, expressed	gene	phytosulfokine receptor precursor, putative, expressed	chr2	2978853	2982400	-	CDS
3	LOC_Os10g38900	erythronate-4-phosphate dehydrogenase, putative, expressed	gene	erythronate-4-phosphate dehydrogenase, putative, expressed	chr10	20653530	20659479	+	CDS
3	LOC_Os02g05960	phytosulfokine receptor precursor, putative, expressed	gene	phytosulfokine receptor precursor, putative, expressed	chr2	2965238	2968656	-	CDS
3	LOC_Os08g09200	aconitate hydratase protein, putative, expressed	gene	aconitate hydratase protein, putative, expressed	chr8	5326534	5333954	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g67720	ABC1 family domain containing protein, putative, expressed	gene	ABC1 family domain containing protein, putative, expressed	chr1	39356412	39361841	-	CDS,three_prime_UTR,downstream
3	LOC_Os06g21580	expressed protein	gene	expressed protein	chr6	12445279	12447248	-	three_prime_UTR,promoter
3	LOC_Os09g38520	DOMON domain containing protein, expressed	gene	DOMON domain containing protein, expressed	chr9	22160396	22163323	-	CDS,promoter
3	LOC_Os07g38580	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr7	23168761	23172699	+	CDS,three_prime_UTR,downstream
3	LOC_Os07g08760	START domain containing protein, putative, expressed	gene	START domain containing protein, putative, expressed	chr7	4502370	4506786	-	CDS,three_prime_UTR,downstream
3	LOC_Os09g27830	OsPDIL2-3  protein disulfide isomerase PDIL2-3, expressed	gene	OsPDIL2-3  protein disulfide isomerase PDIL2-3, expressed	chr9	16929986	16934969	+	CDS,three_prime_UTR
3	LOC_Os02g25650	hypothetical protein	gene	hypothetical protein	chr2	14994734	14998249	-	CDS,promoter
3	LOC_Os03g19400	expressed protein	gene	expressed protein	chr3	10912479	10915434	+	CDS,three_prime_UTR,promoter
3	LOC_Os12g07650	OsGrx_S16 - glutaredoxin subgroup II, expressed	gene	OsGrx_S16 - glutaredoxin subgroup II, expressed	chr12	3848321	3852388	-	CDS,three_prime_UTR
3	LOC_Os04g43690	DUF647 domain containing protein, putative, expressed	gene	DUF647 domain containing protein, putative, expressed	chr4	25670520	25674901	-	CDS
3	LOC_Os07g02360	expressed protein	gene	expressed protein	chr7	808697	811714	+	CDS,three_prime_UTR
3	LOC_Os10g33050	expressed protein	gene	expressed protein	chr10	17244961	17246695	-	three_prime_UTR,promoter
3	LOC_Os01g51710	zinc knuckle domain containing protein, expressed	gene	zinc knuckle domain containing protein, expressed	chr1	29735243	29738404	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g41060	helix-loop-helix DNA-binding, putative, expressed	gene	helix-loop-helix DNA-binding, putative, expressed	chr6	24521168	24526835	-	CDS,three_prime_UTR
3	LOC_Os04g44740	glycosyltransferase sugar-binding region containing DXD motif, putative, expressed	gene	glycosyltransferase sugar-binding region containing DXD motif, putative, expressed	chr4	26319098	26322713	+	CDS,three_prime_UTR
3	LOC_Os12g38970	VIP4, putative, expressed	gene	VIP4, putative, expressed	chr12	23926973	23934519	+	CDS
3	LOC_Os12g20310	sarcoma antigen NY-SAR-91, putative, expressed	gene	sarcoma antigen NY-SAR-91, putative, expressed	chr12	11859942	11863231	+	CDS,downstream
3	LOC_Os02g53050	tetratricopeptide-like helical, putative, expressed	gene	tetratricopeptide-like helical, putative, expressed	chr2	32456453	32458759	-	three_prime_UTR,promoter,downstream
3	LOC_Os02g13160	F-box protein PP2-A15, putative, expressed	gene	F-box protein PP2-A15, putative, expressed	chr2	7012780	7014847	-	CDS,promoter
3	LOC_Os04g53760	kinesin motor domain containing protein, putative, expressed	gene	kinesin motor domain containing protein, putative, expressed	chr4	31848778	31854015	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g33520	DEAD/DEAH box helicase, putative, expressed	gene	DEAD/DEAH box helicase, putative, expressed	chr6	19515633	19523705	-	CDS,downstream
3	LOC_Os09g39330	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr9	22609915	22619148	+	CDS
3	LOC_Os07g07470	transketolase, putative, expressed	gene	transketolase, putative, expressed	chr7	3717642	3721652	-	CDS,three_prime_UTR
3	LOC_Os04g20990	tRNA-dihydrouridine synthase, putative, expressed	gene	tRNA-dihydrouridine synthase, putative, expressed	chr4	11791875	11805701	-	CDS,three_prime_UTR
3	LOC_Os11g47840	OsRhmbd18 - Putative Rhomboid homologue, expressed	gene	OsRhmbd18 - Putative Rhomboid homologue, expressed	chr11	28330286	28334300	-	CDS
3	LOC_Os01g64660	fructose-1,6-bisphosphatase, putative, expressed	gene	fructose-1,6-bisphosphatase, putative, expressed	chr1	37518480	37521570	+	CDS,three_prime_UTR,promoter
3	LOC_Os08g13390	expressed protein	gene	expressed protein	chr8	7962632	7967550	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g50864	expressed protein	gene	expressed protein	chr4	29895933	29899101	-	CDS,three_prime_UTR
3	LOC_Os11g01872	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr11	461884	469172	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g37690	inner membrane protein, putative, expressed	gene	inner membrane protein, putative, expressed	chr10	20094646	20099622	+	CDS,three_prime_UTR
3	LOC_Os04g42590	expressed protein	gene	expressed protein	chr4	25005915	25007808	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g20180	ECT protein, putative, expressed	gene	ECT protein, putative, expressed	chr3	11401367	11406826	+	CDS,three_prime_UTR
3	LOC_Os02g26660	exonuclease, putative, expressed	gene	exonuclease, putative, expressed	chr2	15644367	15649747	-	CDS
3	LOC_Os08g02540	adenylate kinase, putative, expressed	gene	adenylate kinase, putative, expressed	chr8	1045939	1049011	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g08980	preprotein translocase secA family protein, putative, expressed	gene	preprotein translocase secA family protein, putative, expressed	chr11	4757924	4766984	+	CDS,downstream
3	LOC_Os11g37740	stripe rust resistance protein Yr10, putative, expressed	gene	stripe rust resistance protein Yr10, putative, expressed	chr11	21844837	21853027	+	five_prime_UTR,CDS,promoter
3	LOC_Os11g41910	GTP-binding protein, putative, expressed	gene	GTP-binding protein, putative, expressed	chr11	24746714	24750598	+	CDS
3	LOC_Os07g43390	4-alpha-glucanotransferase, chloroplast precursor, putative, expressed	gene	4-alpha-glucanotransferase, chloroplast precursor, putative, expressed	chr7	25979431	25983961	+	CDS,three_prime_UTR,promoter
3	LOC_Os11g01875	lipase-related, putative, expressed	gene	lipase-related, putative, expressed	chr11	473437	479739	-	CDS,three_prime_UTR,downstream
3	LOC_Os03g10870	membrane associated DUF588 domain containing protein, putative, expressed	gene	membrane associated DUF588 domain containing protein, putative, expressed	chr3	5585002	5587859	+	CDS,three_prime_UTR
3	LOC_Os05g05270	sucrose-phosphatase, putative, expressed	gene	sucrose-phosphatase, putative, expressed	chr5	2595425	2599117	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g62440	ribonuclease protein, putative, expressed	gene	ribonuclease protein, putative, expressed	chr1	36137656	36145259	-	CDS,three_prime_UTR
3	LOC_Os07g08880	ES43 protein, putative, expressed	gene	ES43 protein, putative, expressed	chr7	4605680	4613600	+	CDS,three_prime_UTR
3	LOC_Os08g21590	phosphatidylinositol 3-kinase, root isoform, putative, expressed	gene	phosphatidylinositol 3-kinase, root isoform, putative, expressed	chr8	12852256	12872295	-	CDS
3	LOC_Os10g37770	dehydration response related protein, putative, expressed	gene	dehydration response related protein, putative, expressed	chr10	20139433	20142767	-	three_prime_UTR,promoter
3	LOC_Os09g34900	bile acid sodium symporter family protein, putative, expressed	gene	bile acid sodium symporter family protein, putative, expressed	chr9	20336702	20340024	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g03430	CBS domain containing protein, expressed	gene	CBS domain containing protein, expressed	chr3	1475333	1482359	+	CDS,three_prime_UTR
3	LOC_Os08g40790	DNA repair ATPase-related, putative, expressed	gene	DNA repair ATPase-related, putative, expressed	chr8	25796423	25801620	-	CDS,three_prime_UTR
3	LOC_Os09g37520	DUF630/DUF632 domains containing protein, putative, expressed	gene	DUF630/DUF632 domains containing protein, putative, expressed	chr9	21630337	21636311	+	CDS,three_prime_UTR
3	LOC_Os03g27970	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr3	16064517	16068090	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g31400	U-box domain-containing protein, putative, expressed	gene	U-box domain-containing protein, putative, expressed	chr3	17883675	17890797	+	CDS,three_prime_UTR
3	LOC_Os10g01610	expressed protein	gene	expressed protein	chr10	405740	415057	-	CDS
3	LOC_Os01g45990	potassium channel AKT1, putative, expressed	gene	potassium channel AKT1, putative, expressed	chr1	26118664	26125121	-	CDS
3	LOC_Os01g16350	hydroxymethylglutaryl-CoA lyase, putative, expressed	gene	hydroxymethylglutaryl-CoA lyase, putative, expressed	chr1	9267652	9271919	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g56400	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr3	32143681	32146259	-	three_prime_UTR,promoter
3	LOC_Os08g32130	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr8	19934343	19937808	+	CDS
3	LOC_Os11g13680	expressed protein	gene	expressed protein	chr11	7498173	7499233	-	three_prime_UTR,promoter
3	LOC_Os01g06890	leucine-rich repeat family protein, putative	gene	leucine-rich repeat family protein, putative	chr1	3258438	3261454	+	CDS,downstream
3	LOC_Os03g60550	ThiF family domain containing protein, putative, expressed	gene	ThiF family domain containing protein, putative, expressed	chr3	34405710	34412033	+	CDS,three_prime_UTR
3	LOC_Os03g48710	expressed protein	gene	expressed protein	chr3	27755965	27760177	-	three_prime_UTR
3	LOC_Os02g46956	expressed protein	gene	expressed protein	chr2	28663175	28666523	+	CDS
3	LOC_Os02g07480	transglycosylase SLT domain containing protein, expressed	gene	transglycosylase SLT domain containing protein, expressed	chr2	3855931	3863869	-	CDS
3	LOC_Os07g15430	expressed protein	gene	expressed protein	chr7	8925128	8927970	+	three_prime_UTR,downstream
3	LOC_Os03g32526	tRNA-splicing endonuclease positive effector-related, putative, expressed	gene	tRNA-splicing endonuclease positive effector-related, putative, expressed	chr3	18601509	18607482	-	CDS,three_prime_UTR
3	LOC_Os08g07840	PolI-like DNA polymerase, putative, expressed	gene	PolI-like DNA polymerase, putative, expressed	chr8	4389732	4399760	-	CDS,promoter
3	LOC_Os10g36650	actin, putative, expressed	gene	actin, putative, expressed	chr10	19535373	19539384	+	CDS
3	LOC_Os08g41560	ubiquitin carboxyl-terminal hydrolase, putative, expressed	gene	ubiquitin carboxyl-terminal hydrolase, putative, expressed	chr8	26250773	26254127	-	three_prime_UTR,promoter
3	LOC_Os12g36670	F-box/LRR-repeat protein 3, putative, expressed	gene	F-box/LRR-repeat protein 3, putative, expressed	chr12	22423667	22428423	+	CDS,three_prime_UTR
3	LOC_Os01g05440	XH domain containing protein, expressed	gene	XH domain containing protein, expressed	chr1	2569072	2570997	-	CDS,promoter
3	LOC_Os03g48540	expressed protein	gene	expressed protein	chr3	27661950	27667711	+	CDS
3	LOC_Os04g37540	expressed protein	gene	expressed protein	chr4	22155677	22161377	+	CDS,three_prime_UTR,promoter
3	LOC_Os05g33610	expressed protein	gene	expressed protein	chr5	19706264	19712510	+	CDS,three_prime_UTR
3	LOC_Os11g10290	S-domain receptor-like protein kinase, putative, expressed	gene	S-domain receptor-like protein kinase, putative, expressed	chr11	5582246	5584952	-	CDS
3	LOC_Os06g36830	cysteine synthase, mitochondrial precursor, putative	gene	cysteine synthase, mitochondrial precursor, putative	chr6	21694605	21698564	-	CDS,downstream
3	LOC_Os05g33230	cobalt ion transporter, putative, expressed	gene	cobalt ion transporter, putative, expressed	chr5	19420348	19426212	+	CDS,three_prime_UTR,downstream
3	LOC_Os11g34760	MMP37-like protein, mitochondrial precursor, putative, expressed	gene	MMP37-like protein, mitochondrial precursor, putative, expressed	chr11	19903019	19906151	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os05g03910	RNA polymerase II-associated protein 3, putative, expressed	gene	RNA polymerase II-associated protein 3, putative, expressed	chr5	1744558	1748835	-	CDS
3	LOC_Os03g11330	glycosyl transferase 8 domain containing protein, putative, expressed	gene	glycosyl transferase 8 domain containing protein, putative, expressed	chr3	5827913	5834166	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g51530	vacuolar ATP synthase subunit C, putative, expressed	gene	vacuolar ATP synthase subunit C, putative, expressed	chr5	29484806	29489045	-	CDS,three_prime_UTR,downstream
3	LOC_Os06g13600	HEAT repeat family protein, putative, expressed	gene	HEAT repeat family protein, putative, expressed	chr6	7529835	7533858	+	three_prime_UTR
3	LOC_Os08g13800	NB-ARC domain containing protein	gene	NB-ARC domain containing protein	chr8	8229115	8235743	+	CDS,downstream
3	LOC_Os01g07920	prolyl 4-hydroxylase, putative, expressed	gene	prolyl 4-hydroxylase, putative, expressed	chr1	3826039	3829347	-	CDS
3	LOC_Os05g51110	expressed protein	gene	expressed protein	chr5	29254879	29262246	-	CDS
3	LOC_Os07g34390	ankyrin repeat family protein, putative, expressed	gene	ankyrin repeat family protein, putative, expressed	chr7	20614721	20619604	+	CDS
3	LOC_Os03g09080	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	gene	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	chr3	4714098	4718277	-	CDS,three_prime_UTR,downstream
3	LOC_Os08g12840	FabA-like domain containing protein, expressed	gene	FabA-like domain containing protein, expressed	chr8	7609700	7613812	-	CDS,promoter,downstream
3	LOC_Os12g38490	SCARECROW, putative, expressed	gene	SCARECROW, putative, expressed	chr12	23601128	23604134	+	three_prime_UTR,downstream
3	LOC_Os01g19400	expressed protein	gene	expressed protein	chr1	10976156	10978950	+	three_prime_UTR,downstream
3	LOC_Os07g10610	expressed protein	gene	expressed protein	chr7	5762809	5767535	-	three_prime_UTR,CDS
3	LOC_Os01g57270	disease resistance RPP13-like protein 1, putative, expressed	gene	disease resistance RPP13-like protein 1, putative, expressed	chr1	33090577	33095319	+	five_prime_UTR,CDS,promoter
3	LOC_Os08g31800	RGH1A, putative, expressed	gene	RGH1A, putative, expressed	chr8	19712795	19716967	-	CDS,three_prime_UTR,promoter
3	LOC_Os10g20160	serine/threonine-protein kinase receptor precursor, putative, expressed	gene	serine/threonine-protein kinase receptor precursor, putative, expressed	chr10	10048784	10051721	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g30530	40S ribosomal protein S4, putative, expressed	gene	40S ribosomal protein S4, putative, expressed	chr5	17632739	17635426	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g32880	AP-3 complex subunit delta, putative, expressed	gene	AP-3 complex subunit delta, putative, expressed	chr1	18050471	18053893	+	CDS,three_prime_UTR,promoter
3	LOC_Os04g19740	transketolase, chloroplast precursor, putative, expressed	gene	transketolase, chloroplast precursor, putative, expressed	chr4	11017354	11023384	+	CDS
3	LOC_Os01g61830	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	gene	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	chr1	35766539	35771334	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g58070	oxidoreductase, putative, expressed	gene	oxidoreductase, putative, expressed	chr2	35539636	35542483	+	three_prime_UTR
3	LOC_Os03g56960	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr3	32433754	32436851	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g73940	expressed protein	gene	expressed protein	chr1	42837925	42838506	+	five_prime_UTR,CDS,promoter
3	LOC_Os02g53520	kinesin motor domain containing protein, putative, expressed	gene	kinesin motor domain containing protein, putative, expressed	chr2	32725320	32734631	-	CDS,promoter
3	LOC_Os12g12765	expressed protein	gene	expressed protein	chr12	7027584	7029488	-	CDS,three_prime_UTR
3	LOC_Os04g50720	ara54-like RING finger protein, putative, expressed	gene	ara54-like RING finger protein, putative, expressed	chr4	29821747	29826253	+	CDS,three_prime_UTR
3	LOC_Os03g48930	peptidase, T1 family, putative, expressed	gene	peptidase, T1 family, putative, expressed	chr3	27851663	27854131	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os06g50180	DUF803 domain containing, putative, expressed	gene	DUF803 domain containing, putative, expressed	chr6	30382139	30385892	-	CDS,three_prime_UTR
3	LOC_Os07g44190	h/ACA ribonucleoprotein complex subunit 4, putative, expressed	gene	h/ACA ribonucleoprotein complex subunit 4, putative, expressed	chr7	26405646	26407821	-	three_prime_UTR,promoter
3	LOC_Os03g50970	retrotransposon protein, putative, Ty1-copia subclass, expressed	gene	retrotransposon protein, putative, Ty1-copia subclass, expressed	chr3	29107688	29112944	-	CDS
3	LOC_Os01g42690	OsPOP2 - Putative Prolyl Oligopeptidase homologue, expressed	gene	OsPOP2 - Putative Prolyl Oligopeptidase homologue, expressed	chr1	24276051	24280005	+	CDS,downstream
3	LOC_Os07g43870	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr7	26229677	26239921	+	CDS
3	LOC_Os08g39130	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr8	24713599	24715596	+	CDS,three_prime_UTR,promoter
3	LOC_Os07g16224	piwi domain containing protein, putative, expressed	gene	piwi domain containing protein, putative, expressed	chr7	9459482	9467114	-	CDS,three_prime_UTR
3	LOC_Os06g44410	histidine kinase, putative, expressed	gene	histidine kinase, putative, expressed	chr6	26806864	26812603	+	CDS
3	LOC_Os02g53040	STE_MEKK_ste11_MAP3K.11 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	gene	STE_MEKK_ste11_MAP3K.11 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	chr2	32455259	32456963	+	CDS,three_prime_UTR
3	LOC_Os05g47780	E3 ubiquitin ligase, putative, expressed	gene	E3 ubiquitin ligase, putative, expressed	chr5	27314893	27319586	+	CDS
3	LOC_Os07g08070	transmembrane BAX inhibitor motif-containing protein, putative, expressed	gene	transmembrane BAX inhibitor motif-containing protein, putative, expressed	chr7	4088221	4091088	-	CDS,three_prime_UTR,promoter
3	LOC_Os06g07887	exostosin family protein, putative	gene	exostosin family protein, putative	chr6	3833300	3835514	-	CDS,promoter
3	LOC_Os09g26530	expressed protein	gene	expressed protein	chr9	16028328	16034354	-	CDS,three_prime_UTR
3	LOC_Os03g51260	expressed protein	gene	expressed protein	chr3	29316915	29319408	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g12190	expressed protein	gene	expressed protein	chr12	6688496	6691593	-	CDS
3	LOC_Os01g42700	expressed protein	gene	expressed protein	chr1	24281691	24284266	-	three_prime_UTR
3	LOC_Os01g68930	expressed protein	gene	expressed protein	chr1	40055010	40058403	-	CDS
3	LOC_Os06g20879	expressed protein	gene	expressed protein	chr6	12061652	12064348	+	three_prime_UTR
3	LOC_Os05g18750	ribosomal protein L25, putative, expressed	gene	ribosomal protein L25, putative, expressed	chr5	10865295	10869162	+	three_prime_UTR,downstream
3	LOC_Os01g07760	phospholipase D, putative, expressed	gene	phospholipase D, putative, expressed	chr1	3723314	3728284	-	CDS,three_prime_UTR
3	LOC_Os01g67770	two-component response regulator, putative, expressed	gene	two-component response regulator, putative, expressed	chr1	39386187	39390058	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g38850	MCM8 - Putative minichromosome maintenance MCM family subunit 8	gene	MCM8 - Putative minichromosome maintenance MCM family subunit 8	chr5	22726715	22734996	+	CDS
3	LOC_Os12g39650	tubulin, putative, expressed	gene	tubulin, putative, expressed	chr12	24445114	24449234	+	CDS,three_prime_UTR
3	LOC_Os05g30950	MSP domain containing protein, putative, expressed	gene	MSP domain containing protein, putative, expressed	chr5	17904547	17910190	-	CDS,three_prime_UTR
3	LOC_Os08g15444	expressed protein	gene	expressed protein	chr8	9394063	9396984	+	three_prime_UTR
3	LOC_Os02g12660	protein kinase domain containing protein, putative, expressed	gene	protein kinase domain containing protein, putative, expressed	chr2	6609371	6614191	-	five_prime_UTR,CDS,downstream
3	LOC_Os05g27790	membrane associated DUF588 domain containing protein, putative, expressed	gene	membrane associated DUF588 domain containing protein, putative, expressed	chr5	16126601	16129297	-	CDS,three_prime_UTR
3	LOC_Os08g08500	reductase, putative	gene	reductase, putative	chr8	4897867	4899262	-	CDS,promoter
3	LOC_Os08g34480	splicing factor 3B subunit 5, putative, expressed	gene	splicing factor 3B subunit 5, putative, expressed	chr8	21629340	21633614	-	CDS,three_prime_UTR
3	LOC_Os05g01470	methionine S-methyltransferase, putative, expressed	gene	methionine S-methyltransferase, putative, expressed	chr5	267816	278060	-	CDS,three_prime_UTR
3	LOC_Os06g44370	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr6	26777841	26780802	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os03g58540	spo0B-associated GTP-binding protein, putative, expressed	gene	spo0B-associated GTP-binding protein, putative, expressed	chr3	33327300	33331382	+	three_prime_UTR,CDS,promoter
3	LOC_Os06g51490	PHD-finger domain containing protein, putative, expressed	gene	PHD-finger domain containing protein, putative, expressed	chr6	31183913	31186614	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g06110	villin, putative, expressed	gene	villin, putative, expressed	chr5	3050752	3057002	+	CDS
3	LOC_Os01g73910	peptidase, putative, expressed	gene	peptidase, putative, expressed	chr1	42825060	42827817	-	CDS,three_prime_UTR
3	LOC_Os01g61440	expressed protein	gene	expressed protein	chr1	35524481	35526549	-	three_prime_UTR,promoter
3	LOC_Os05g43530	CSLC7 - cellulose synthase-like family C, expressed	gene	CSLC7 - cellulose synthase-like family C, expressed	chr5	25238170	25242089	-	CDS
3	LOC_Os06g08540	formin-like protein 13, putative, expressed	gene	formin-like protein 13, putative, expressed	chr6	4223296	4227007	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g66360	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, putative, expressed	gene	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, putative, expressed	chr1	38540775	38545161	+	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os09g36880	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr9	21270171	21272107	-	three_prime_UTR,CDS,downstream
3	LOC_Os12g21930	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr12	12346798	12350988	+	three_prime_UTR,downstream
3	LOC_Os03g59020	T-complex protein, putative, expressed	gene	T-complex protein, putative, expressed	chr3	33585622	33590944	+	CDS
3	LOC_Os09g26390	AT-rich interaction region, putative, expressed	gene	AT-rich interaction region, putative, expressed	chr9	15935943	15942745	-	CDS,three_prime_UTR,downstream
3	LOC_Os11g03410	exostosin family domain containing protein, expressed	gene	exostosin family domain containing protein, expressed	chr11	1287705	1291355	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g60730	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr3	34514618	34518848	+	three_prime_UTR,downstream
3	LOC_Os08g25380	serine/threonine-protein kinase BRI1-like 1 precursor, putative, expressed	gene	serine/threonine-protein kinase BRI1-like 1 precursor, putative, expressed	chr8	15428580	15432569	-	CDS,three_prime_UTR
3	LOC_Os03g61780	glucan endo-1,3-beta-glucosidase-related, putative, expressed	gene	glucan endo-1,3-beta-glucosidase-related, putative, expressed	chr3	35018789	35021641	+	three_prime_UTR,downstream
3	LOC_Os10g20510	expressed protein	gene	expressed protein	chr10	10266198	10271725	+	CDS,three_prime_UTR
3	LOC_Os09g24210	expressed protein	gene	expressed protein	chr9	14367031	14372668	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g16030	expressed protein	gene	expressed protein	chr7	9343655	9348469	+	three_prime_UTR
3	LOC_Os06g43120	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	gene	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	chr6	25917415	25925337	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g66510	MLO domain containing protein, putative, expressed	gene	MLO domain containing protein, putative, expressed	chr1	38626703	38631437	+	three_prime_UTR,downstream
3	LOC_Os01g58790	GHMP kinases ATP-binding protein, putative, expressed	gene	GHMP kinases ATP-binding protein, putative, expressed	chr1	33970143	33976282	+	CDS
3	LOC_Os08g32980	expressed protein	gene	expressed protein	chr8	20459037	20462481	-	CDS,three_prime_UTR
3	LOC_Os08g42210	expressed protein	gene	expressed protein	chr8	26655765	26658820	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g46040	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr5	26642522	26645178	-	three_prime_UTR,CDS,promoter
3	LOC_Os08g44180	expressed protein	gene	expressed protein	chr8	27808303	27811643	+	CDS,downstream
3	LOC_Os10g32710	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr10	17049002	17053548	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g54084	phytochrome C, putative, expressed	gene	phytochrome C, putative, expressed	chr3	30997611	31002669	+	CDS
3	LOC_Os07g18154	aldehyde oxidase 4, putative, expressed	gene	aldehyde oxidase 4, putative, expressed	chr7	10747752	10759854	+	CDS
3	LOC_Os08g29100	SAM domain family protein, expressed	gene	SAM domain family protein, expressed	chr8	17811785	17814915	-	CDS,three_prime_UTR,downstream
3	LOC_Os06g43670	Leucine Rich Repeat family protein, expressed	gene	Leucine Rich Repeat family protein, expressed	chr6	26278807	26291348	+	CDS,downstream
3	LOC_Os01g49180	ATP dependent DNA ligase family protein, putative, expressed	gene	ATP dependent DNA ligase family protein, putative, expressed	chr1	28260371	28272023	-	CDS
3	LOC_Os02g49326	SET domain-containing protein, putative, expressed	gene	SET domain-containing protein, putative, expressed	chr2	30138391	30142823	+	CDS,three_prime_UTR
3	LOC_Os09g37710	NIN, putative, expressed	gene	NIN, putative, expressed	chr9	21734959	21740152	+	CDS,three_prime_UTR,downstream
3	LOC_Os12g31450	plastid division regulator MinE, putative, expressed	gene	plastid division regulator MinE, putative, expressed	chr12	18884689	18887126	-	CDS,promoter
3	LOC_Os03g16910	SLT1 protein, putative, expressed	gene	SLT1 protein, putative, expressed	chr3	9401559	9404492	+	three_prime_UTR
3	LOC_Os01g17390	OsFBX5 - F-box domain containing protein, expressed	gene	OsFBX5 - F-box domain containing protein, expressed	chr1	10002926	10006744	+	CDS,three_prime_UTR,downstream
3	LOC_Os01g67180	ribonuclease T2 family domain containing protein, expressed	gene	ribonuclease T2 family domain containing protein, expressed	chr1	38989726	38992761	-	CDS,three_prime_UTR,promoter,downstream
3	LOC_Os01g67590	oligopeptidase, putative, expressed	gene	oligopeptidase, putative, expressed	chr1	39288254	39295603	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g13580	kinesin motor domain containing protein, expressed	gene	kinesin motor domain containing protein, expressed	chr2	7281235	7285696	-	CDS,promoter
3	LOC_Os01g15460	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	gene	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	chr1	8658375	8663836	-	CDS,three_prime_UTR,promoter
3	LOC_Os09g33450	zinc finger DHHC domain-containing protein, putative, expressed	gene	zinc finger DHHC domain-containing protein, putative, expressed	chr9	19701612	19706208	-	CDS,three_prime_UTR
3	LOC_Os02g16000	E1-BTB1 - Bric-a-Brac, Tramtrack, and Broad Complex domain with E1 subfamily conserved sequence, expressed	gene	E1-BTB1 - Bric-a-Brac, Tramtrack, and Broad Complex domain with E1 subfamily conserved sequence, expressed	chr2	9082727	9088011	+	CDS
3	LOC_Os07g29770	zinc finger protein, putative, expressed	gene	zinc finger protein, putative, expressed	chr7	17497655	17507823	+	three_prime_UTR
3	LOC_Os03g16824	spotted leaf 11, putative, expressed	gene	spotted leaf 11, putative, expressed	chr3	9328343	9334024	+	CDS,three_prime_UTR
3	LOC_Os02g34510	vacuolar ATP synthase, putative, expressed	gene	vacuolar ATP synthase, putative, expressed	chr2	20679728	20681957	-	three_prime_UTR
3	LOC_Os01g66170	SNARE associated Golgi protein, putative, expressed	gene	SNARE associated Golgi protein, putative, expressed	chr1	38435799	38439417	-	CDS,three_prime_UTR
3	LOC_Os11g12650	PHD-finger domain containing protein, putative, expressed	gene	PHD-finger domain containing protein, putative, expressed	chr11	7120869	7124602	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g15180	PH domain containing protein, expressed	gene	PH domain containing protein, expressed	chr3	8293627	8305202	-	CDS,downstream
3	LOC_Os07g31270	cupin 2, conserved barrel domain protein, putative, expressed	gene	cupin 2, conserved barrel domain protein, putative, expressed	chr7	18508984	18514217	+	CDS,three_prime_UTR
3	LOC_Os04g31690	expressed protein	gene	expressed protein	chr4	18812730	18816433	+	CDS,three_prime_UTR,downstream
3	LOC_Os05g46250	DUF1230 domain containing protein, expressed	gene	DUF1230 domain containing protein, expressed	chr5	26758089	26761398	+	CDS,three_prime_UTR
3	LOC_Os05g43480	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	gene	ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	chr5	25211790	25217569	+	CDS
3	LOC_Os06g21480	60S ribosomal protein L31, putative, expressed	gene	60S ribosomal protein L31, putative, expressed	chr6	12411526	12414342	+	CDS
3	LOC_Os10g42270	expressed protein	gene	expressed protein	chr10	22687625	22689584	-	three_prime_UTR,promoter
3	LOC_Os12g13440	phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed	gene	phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed	chr12	7518145	7532530	+	three_prime_UTR
3	LOC_Os11g36160	receptor-like protein kinase 2 precursor, putative, expressed	gene	receptor-like protein kinase 2 precursor, putative, expressed	chr11	20794984	20799722	-	CDS
3	LOC_Os01g17214	major facilitator superfamily antiporter, putative, expressed	gene	major facilitator superfamily antiporter, putative, expressed	chr1	9888524	9901714	-	CDS,three_prime_UTR,promoter
3	LOC_Os01g16210	uncharacterized Cys-rich domain containing protein, putative, expressed	gene	uncharacterized Cys-rich domain containing protein, putative, expressed	chr1	9172107	9174991	-	CDS,three_prime_UTR
3	LOC_Os03g24460	aminotransferase domain containing protein, putative, expressed	gene	aminotransferase domain containing protein, putative, expressed	chr3	13940061	13947499	-	three_prime_UTR,CDS
3	LOC_Os04g02680	expressed protein	gene	expressed protein	chr4	1010914	1015246	-	CDS,three_prime_UTR
3	LOC_Os04g35180	co-chaperone GrpE protein, putative, expressed	gene	co-chaperone GrpE protein, putative, expressed	chr4	21204995	21207589	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g26260	hypothetical protein	gene	hypothetical protein	chr4	15304295	15306023	-	CDS
3	LOC_Os02g42790	short-chain dehydrogenase/reductase, putative	gene	short-chain dehydrogenase/reductase, putative	chr2	25721609	25723542	+	CDS,promoter,downstream
3	LOC_Os03g05480	ZOS3-01 - C2H2 zinc finger protein, expressed	gene	ZOS3-01 - C2H2 zinc finger protein, expressed	chr3	2712309	2714914	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g05000	oxidoreductase, aldo/keto reductase family protein, putative, expressed	gene	oxidoreductase, aldo/keto reductase family protein, putative, expressed	chr7	2196574	2200447	+	CDS
3	LOC_Os04g48750	3-oxo-5-alpha-steroid 4-dehydrogenase, putative, expressed	gene	3-oxo-5-alpha-steroid 4-dehydrogenase, putative, expressed	chr4	28886677	28891132	+	CDS,three_prime_UTR
3	LOC_Os12g38930	glycosyl transferase 8 domain containing protein, putative, expressed	gene	glycosyl transferase 8 domain containing protein, putative, expressed	chr12	23902334	23907876	-	CDS,promoter
3	LOC_Os01g65800	powdery mildew resistant protein 5, putative, expressed	gene	powdery mildew resistant protein 5, putative, expressed	chr1	38211809	38216092	-	CDS,three_prime_UTR
3	LOC_Os04g52760	gamma-soluble NSF attachment protein, putative, expressed	gene	gamma-soluble NSF attachment protein, putative, expressed	chr4	31227033	31231058	-	CDS,three_prime_UTR
3	LOC_Os03g48040	2Fe-2S iron-sulfur cluster binding domain containing protein, expressed	gene	2Fe-2S iron-sulfur cluster binding domain containing protein, expressed	chr3	27302910	27305957	+	CDS,three_prime_UTR
3	LOC_Os10g14194	POEI28 - Pollen Ole e I allergen and extensin family protein precursor, expressed	gene	POEI28 - Pollen Ole e I allergen and extensin family protein precursor, expressed	chr10	7711704	7718097	-	CDS,three_prime_UTR,promoter
3	LOC_Os05g38710	lipin, N-terminal conserved region family protein, expressed	gene	lipin, N-terminal conserved region family protein, expressed	chr5	22643991	22651382	-	CDS,three_prime_UTR
3	LOC_Os03g56340	hypothetical protein	gene	hypothetical protein	chr3	32106984	32108004	-	CDS
3	LOC_Os08g42530	SFC, putative, expressed	gene	SFC, putative, expressed	chr8	26868563	26877272	-	CDS,three_prime_UTR
3	LOC_Os01g66850	pectinacetylesterase domain containing protein, expressed	gene	pectinacetylesterase domain containing protein, expressed	chr1	38811307	38814136	-	CDS
3	LOC_Os07g33420	hydroxylase, putative, expressed	gene	hydroxylase, putative, expressed	chr7	19974537	19980371	-	CDS
3	LOC_Os07g23930	hypothetical protein	gene	hypothetical protein	chr7	13524260	13531898	-	CDS
3	LOC_Os09g17100	hypothetical protein	gene	hypothetical protein	chr9	10472904	10473604	+	CDS,promoter,downstream
3	LOC_Os06g05060	ELF3 protein, putative, expressed	gene	ELF3 protein, putative, expressed	chr6	2233120	2238163	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g50270	expressed protein	gene	expressed protein	chr3	28644160	28646145	-	CDS,three_prime_UTR
3	LOC_Os03g15570	STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	gene	STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	chr3	8571803	8576438	-	CDS,three_prime_UTR,promoter
3	LOC_Os03g01850	cyclin-dependent kinase A-1, putative, expressed	gene	cyclin-dependent kinase A-1, putative, expressed	chr3	509593	513784	+	CDS,three_prime_UTR
3	LOC_Os08g09180	postsynaptic protein CRIPT, putative, expressed	gene	postsynaptic protein CRIPT, putative, expressed	chr8	5317649	5319876	-	CDS,three_prime_UTR,promoter
3	LOC_Os07g18250	expressed protein	gene	expressed protein	chr7	10816332	10824089	-	CDS,three_prime_UTR
3	LOC_Os02g42300	expressed protein	gene	expressed protein	chr2	25429184	25433567	+	three_prime_UTR,promoter
3	LOC_Os07g07070	anthranilate phosphoribosyltransferase, putative, expressed	gene	anthranilate phosphoribosyltransferase, putative, expressed	chr7	3484499	3488390	-	three_prime_UTR,promoter
3	LOC_Os03g44540	nuclear transcription factor Y subunit, putative, expressed	gene	nuclear transcription factor Y subunit, putative, expressed	chr3	25067141	25072784	-	CDS
3	LOC_Os01g56670	glycosyl hydrolase family 47 domain contain protein, expressed	gene	glycosyl hydrolase family 47 domain contain protein, expressed	chr1	32697980	32708243	+	CDS,three_prime_UTR
3	LOC_Os06g02600	DAG protein, chloroplast precursor, putative, expressed	gene	DAG protein, chloroplast precursor, putative, expressed	chr6	921217	924283	+	CDS,three_prime_UTR,promoter
3	LOC_Os03g52770	expressed protein	gene	expressed protein	chr3	30241893	30251706	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g15520	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr2	8700424	8703094	-	CDS
3	LOC_Os12g06510	calcineurin B, putative, expressed	gene	calcineurin B, putative, expressed	chr12	3144031	3148570	-	CDS,three_prime_UTR
3	LOC_Os01g67510	recA protein, putative, expressed	gene	recA protein, putative, expressed	chr1	39237743	39242943	-	CDS
3	LOC_Os01g57360	acyltransferase, putative, expressed	gene	acyltransferase, putative, expressed	chr1	33153232	33157276	-	CDS
3	LOC_Os11g04520	PP2A regulatory subunit TAP46, putative, expressed	gene	PP2A regulatory subunit TAP46, putative, expressed	chr11	1893739	1913505	+	CDS,three_prime_UTR
3	LOC_Os04g57670	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr4	34148357	34151562	-	three_prime_UTR,promoter
3	LOC_Os08g44520	peptidyl-prolyl cis-trans isomerase, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, putative, expressed	chr8	27997051	28000854	-	CDS,three_prime_UTR,promoter
3	LOC_Os04g11820	white-brown complex homolog protein, putative, expressed	gene	white-brown complex homolog protein, putative, expressed	chr4	6470775	6477313	-	CDS
3	LOC_Os09g35000	flap endonuclease, putative, expressed	gene	flap endonuclease, putative, expressed	chr9	20389438	20393659	+	CDS
3	LOC_Os03g20850	exostosin family domain containing protein, expressed	gene	exostosin family domain containing protein, expressed	chr3	11803907	11806525	+	CDS,downstream
3	LOC_Os06g05600	OsFBDUF31 - F-box and DUF domain containing protein, expressed	gene	OsFBDUF31 - F-box and DUF domain containing protein, expressed	chr6	2534325	2536023	+	three_prime_UTR,promoter
3	LOC_Os09g30478	expressed protein	gene	expressed protein	chr9	18575958	18580279	+	CDS,three_prime_UTR
3	LOC_Os09g26660	ferric reductase, putative, expressed	gene	ferric reductase, putative, expressed	chr9	16185279	16196220	+	CDS,three_prime_UTR
3	LOC_Os01g72220	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr1	41872906	41879558	-	CDS,promoter
3	LOC_Os11g19130	expressed protein	gene	expressed protein	chr11	10905448	10910194	+	CDS,three_prime_UTR
3	LOC_Os02g56130	PCNA - Putative DNA replicative polymerase clamp, expressed	gene	PCNA - Putative DNA replicative polymerase clamp, expressed	chr2	34345538	34347787	+	CDS,three_prime_UTR,downstream
3	LOC_Os02g44550	NADP-dependent malic enzyme, putative, expressed	gene	NADP-dependent malic enzyme, putative, expressed	chr2	26982809	26988121	-	three_prime_UTR
3	LOC_Os06g19690	expressed protein	gene	expressed protein	chr6	11243643	11247711	-	CDS
3	LOC_Os02g21870	expressed protein	gene	expressed protein	chr2	13002819	13005812	-	promoter
3	LOC_Os05g43960	no apical meristem protein, putative, expressed	gene	no apical meristem protein, putative, expressed	chr5	25517553	25519186	-	promoter
3	LOC_Os01g73662	expressed protein	gene	expressed protein	chr1	42678197	42679502	+	promoter,downstream
3	LOC_Os03g25130	OB-fold nucleic acid binding domain containing protein, putative, expressed	gene	OB-fold nucleic acid binding domain containing protein, putative, expressed	chr3	14356460	14357860	-	promoter
3	LOC_Os11g23854	4F5 protein family protein, expressed	gene	4F5 protein family protein, expressed	chr11	13042658	13043497	-	promoter
3	LOC_Os11g46230	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr11	27520118	27525456	-	promoter
3	LOC_Os12g29960	yippee zinc-binding protein, putative	gene	yippee zinc-binding protein, putative	chr12	17879012	17880086	-	promoter
3	LOC_Os08g44420	kinesin-related protein, putative, expressed	gene	kinesin-related protein, putative, expressed	chr8	27939992	27946104	-	promoter
3	LOC_Os08g43770	carrier, putative	gene	carrier, putative	chr8	27644224	27644928	+	promoter,downstream
3	LOC_Os03g46720	OsFBX106 - F-box domain containing protein	gene	OsFBX106 - F-box domain containing protein	chr3	26433763	26435626	-	promoter,downstream
3	LOC_Os01g26080	hypothetical protein	gene	hypothetical protein	chr1	14776780	14778084	+	promoter
3	LOC_Os11g44930	pentatricopeptide repeat domain containing protein, putative	gene	pentatricopeptide repeat domain containing protein, putative	chr11	26726769	26728316	-	promoter,downstream
3	LOC_Os07g39020	OsSub53 - Putative Subtilisin homologue, expressed	gene	OsSub53 - Putative Subtilisin homologue, expressed	chr7	23397216	23399662	+	promoter
3	LOC_Os01g68460	DC1, putative, expressed	gene	DC1, putative, expressed	chr1	39779740	39782302	-	promoter
3	LOC_Os01g57470	EF hand family protein, putative, expressed	gene	EF hand family protein, putative, expressed	chr1	33206608	33207649	-	promoter
3	LOC_Os03g22620	terpene synthase family, metal binding domain containing protein, expressed	gene	terpene synthase family, metal binding domain containing protein, expressed	chr3	13033946	13044835	-	promoter
3	LOC_Os02g34710	expressed protein	gene	expressed protein	chr2	20817610	20819032	-	promoter
3	LOC_Os01g70970	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr1	41078426	41080966	-	promoter
3	LOC_Os12g01080	CCT motif family protein	gene	CCT motif family protein	chr12	41336	41868	+	promoter
3	LOC_Os01g11430	expressed protein	gene	expressed protein	chr1	6138582	6141129	-	promoter
3	LOC_Os01g65992	expressed protein	gene	expressed protein	chr1	38304781	38305691	+	promoter
3	LOC_Os07g48440	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	28966882	28967472	-	promoter
3	LOC_Os04g15800	expressed protein	gene	expressed protein	chr4	8581483	8583578	-	promoter
3	LOC_Os08g25260	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr8	15341762	15344015	-	promoter
3	LOC_Os07g02230	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr7	706012	717374	+	promoter
3	LOC_Os08g25149	unknown	gene	unknown	chr8	15276820	15277829	-	promoter
3	LOC_Os02g40350	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr2	24430070	24432250	-	promoter
3	LOC_Os03g56470	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr3	32175511	32178172	-	promoter
3	LOC_Os01g59070	expressed protein	gene	expressed protein	chr1	34134758	34136540	+	promoter,downstream
3	LOC_Os09g29370	RING-H2 finger protein ATL5F, putative, expressed	gene	RING-H2 finger protein ATL5F, putative, expressed	chr9	17832428	17833915	-	promoter
3	LOC_Os09g10610	conserved hypothetical protein	gene	conserved hypothetical protein	chr9	5785893	5787455	-	promoter
3	LOC_Os05g44090	DUF623 domain containing protein	gene	DUF623 domain containing protein	chr5	25573383	25574333	-	promoter
3	LOC_Os11g29000	pollen signalling protein with adenylyl cyclase activity, putative, expressed	gene	pollen signalling protein with adenylyl cyclase activity, putative, expressed	chr11	16316540	16319524	-	promoter
3	LOC_Os09g27040	GEX1, putative, expressed	gene	GEX1, putative, expressed	chr9	16443341	16447087	+	promoter
3	LOC_Os11g29360	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr11	16566605	16568088	-	promoter
3	LOC_Os04g58360	hypothetical protein	gene	hypothetical protein	chr4	34545947	34546336	+	promoter
3	LOC_Os01g73160	40S ribosomal protein S10, putative, expressed	gene	40S ribosomal protein S10, putative, expressed	chr1	42424096	42426308	-	promoter
3	LOC_Os03g01900	40S ribosomal protein S17, putative, expressed	gene	40S ribosomal protein S17, putative, expressed	chr3	558225	558945	-	promoter,downstream
3	LOC_Os04g33860	expressed protein	gene	expressed protein	chr4	20336660	20337660	+	promoter,downstream
3	LOC_Os07g01300	expressed protein	gene	expressed protein	chr7	181511	182243	-	promoter
3	LOC_Os11g20190	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr11	11663539	11664853	+	promoter
3	LOC_Os04g41510	serine/threonine-protein kinase GCN2, putative, expressed	gene	serine/threonine-protein kinase GCN2, putative, expressed	chr4	24430416	24439513	+	promoter
3	LOC_Os01g52900	expressed protein	gene	expressed protein	chr1	30412560	30414770	-	promoter
3	LOC_Os10g24090	glucosyltransferase, putative	gene	glucosyltransferase, putative	chr10	12271478	12272185	+	promoter
3	LOC_Os12g01550	DUF260 domain containing protein, putative, expressed	gene	DUF260 domain containing protein, putative, expressed	chr12	330023	330716	+	promoter
3	LOC_Os09g27734	expressed protein	gene	expressed protein	chr9	16877107	16879415	-	promoter
3	LOC_Os06g04290	S10/S20 domain containing ribosomal protein, putative, expressed	gene	S10/S20 domain containing ribosomal protein, putative, expressed	chr6	1819085	1821079	-	promoter,downstream
3	LOC_Os03g19290	mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	gene	mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	chr3	10847192	10848744	+	promoter
3	LOC_Os07g01900	expressed protein	gene	expressed protein	chr7	536981	538784	+	promoter
3	LOC_Os10g18234	hypothetical protein	gene	hypothetical protein	chr10	9191539	9194350	-	promoter
3	LOC_Os06g46830	conserved hypothetical protein	gene	conserved hypothetical protein	chr6	28429780	28430406	-	promoter
3	LOC_Os08g39170	conserved hypothetical protein	gene	conserved hypothetical protein	chr8	24732196	24735647	-	promoter
3	LOC_Os06g22394	expressed protein	gene	expressed protein	chr6	13008939	13009620	-	promoter
3	LOC_Os10g37220	hypothetical protein	gene	hypothetical protein	chr10	19842670	19843344	+	promoter
3	LOC_Os01g33770	hypothetical protein	gene	hypothetical protein	chr1	18588621	18589262	-	promoter
3	LOC_Os11g04530	sulfotransferase domain containing protein	gene	sulfotransferase domain containing protein	chr11	1898425	1901445	-	promoter
3	LOC_Os05g18650	hypothetical protein	gene	hypothetical protein	chr5	10800164	10803125	-	promoter,downstream
3	LOC_Os02g40870	phosphatidylinositol N-acetylglucosaminyltransferase subunit C, putative, expressed	gene	phosphatidylinositol N-acetylglucosaminyltransferase subunit C, putative, expressed	chr2	24767552	24769211	-	promoter
3	LOC_Os06g07941	iron/ascorbate-dependent oxidoreductase, putative	gene	iron/ascorbate-dependent oxidoreductase, putative	chr6	3857435	3859469	+	promoter
3	LOC_Os07g25600	hypothetical protein	gene	hypothetical protein	chr7	14676522	14676959	+	promoter
3	LOC_Os05g50340	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr5	28782800	28783405	-	promoter
3	LOC_Os01g70930	leucoanthocyanidin dioxygenase, putative, expressed	gene	leucoanthocyanidin dioxygenase, putative, expressed	chr1	41055973	41057829	-	promoter
3	LOC_Os06g19170	cadmium tolerance factor, putative, expressed	gene	cadmium tolerance factor, putative, expressed	chr6	10911408	10914491	+	promoter
3	LOC_Os06g50850	expressed protein	gene	expressed protein	chr6	30767269	30769574	+	promoter,downstream
3	LOC_Os06g23450	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr6	13686769	13687747	-	promoter
3	LOC_Os09g07770	conserved hypothetical protein	gene	conserved hypothetical protein	chr9	3930419	3931151	-	promoter,downstream
3	LOC_Os05g06370	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr5	3263292	3264029	-	promoter
3	LOC_Os09g26710	major ampullate spidroin 2, putative	gene	major ampullate spidroin 2, putative	chr9	16228908	16230064	-	promoter
3	LOC_Os01g04210	DNA binding protein, putative	gene	DNA binding protein, putative	chr1	1856104	1857452	+	promoter
3	LOC_Os04g44600	CRP1 - Cysteine-rich family protein precursor, expressed	gene	CRP1 - Cysteine-rich family protein precursor, expressed	chr4	26207199	26207960	+	promoter
3	LOC_Os01g66250	S-locus-like receptor protein kinase, putative, expressed	gene	S-locus-like receptor protein kinase, putative, expressed	chr1	38480192	38482964	+	promoter
3	LOC_Os01g19529	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr1	11077175	11082458	-	promoter
3	LOC_Os04g25370	cytokinin-O-glucosyltransferase 2, putative, expressed	gene	cytokinin-O-glucosyltransferase 2, putative, expressed	chr4	14670821	14672375	+	promoter
3	LOC_Os12g05180	avr9/Cf-9 rapidly elicited protein, putative, expressed	gene	avr9/Cf-9 rapidly elicited protein, putative, expressed	chr12	2287575	2289545	-	promoter
3	LOC_Os03g53740	expressed protein	gene	expressed protein	chr3	30801916	30803025	+	promoter,downstream
3	LOC_Os10g13950	hypothetical protein	gene	hypothetical protein	chr10	7596187	7598458	-	promoter
3	LOC_Os11g35370	hypothetical protein	gene	hypothetical protein	chr11	20265887	20266582	+	promoter
3	LOC_Os03g13390	oxidoreductase, aldo/keto reductase family protein, putative, expressed	gene	oxidoreductase, aldo/keto reductase family protein, putative, expressed	chr3	7227962	7230747	+	promoter
3	LOC_Os12g25800	hypothetical protein	gene	hypothetical protein	chr12	14960408	14961037	+	promoter
3	LOC_Os01g05850	conserved hypothetical protein	gene	conserved hypothetical protein	chr1	2802779	2803844	-	promoter
3	LOC_Os11g09478	OsFBX402 - F-box domain containing protein	gene	OsFBX402 - F-box domain containing protein	chr11	5087006	5090752	-	promoter
3	LOC_Os02g10300	polygalacturonase, putative, expressed	gene	polygalacturonase, putative, expressed	chr2	5411327	5414291	+	promoter,downstream
3	LOC_Os12g20380	hypothetical protein	gene	hypothetical protein	chr12	11898125	11899921	+	promoter
3	LOC_Os01g58640	nucleotide pyrophosphatase/phosphodiesterase, putative, expressed	gene	nucleotide pyrophosphatase/phosphodiesterase, putative, expressed	chr1	33896172	33903474	+	promoter
3	LOC_Os08g44340	monodehydroascorbate reductase, putative, expressed	gene	monodehydroascorbate reductase, putative, expressed	chr8	27897097	27900409	+	promoter
3	LOC_Os10g26530	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr10	13759690	13760389	-	promoter
3	LOC_Os01g25800	expressed protein	gene	expressed protein	chr1	14610277	14610870	+	promoter,downstream
3	LOC_Os03g26240	hypothetical protein	gene	hypothetical protein	chr3	15007402	15008100	-	promoter
3	LOC_Os03g14530	S10/S20 domain containing ribosomal protein, putative, expressed	gene	S10/S20 domain containing ribosomal protein, putative, expressed	chr3	7883753	7885770	+	promoter
3	LOC_Os06g13160	viral-response family protein, expressed	gene	viral-response family protein, expressed	chr6	7217854	7219284	-	promoter
3	LOC_Os10g24004	hypothetical protein	gene	hypothetical protein	chr10	12231722	12232523	-	promoter
3	LOC_Os01g25340	hypothetical protein	gene	hypothetical protein	chr1	14317233	14318541	-	promoter
3	LOC_Os03g10760	hypothetical protein	gene	hypothetical protein	chr3	5493237	5494040	+	promoter
3	LOC_Os09g15780	expressed protein	gene	expressed protein	chr9	9637865	9641416	+	promoter,downstream
3	LOC_Os03g07340	ribosomal L18p/L5e family protein, putative, expressed	gene	ribosomal L18p/L5e family protein, putative, expressed	chr3	3726758	3728066	-	promoter,downstream
3	LOC_Os09g16790	transposon protein, putative, CACTA, En/Spm sub-class	gene	transposon protein, putative, CACTA, En/Spm sub-class	chr9	10262361	10265405	+	promoter
3	LOC_Os03g06910	PPR repeat containing protein	gene	PPR repeat containing protein	chr3	3501528	3503474	-	promoter
3	LOC_Os03g01180	phosphoglycerate mutase, putative, expressed	gene	phosphoglycerate mutase, putative, expressed	chr3	119877	121838	-	promoter,downstream
3	LOC_Os08g07550	hAT dimerisation domain-containing protein, putative, expressed	gene	hAT dimerisation domain-containing protein, putative, expressed	chr8	4241938	4242886	+	promoter
3	LOC_Os01g17330	eukaryotic translation initiation factor 6, putative, expressed	gene	eukaryotic translation initiation factor 6, putative, expressed	chr1	9966161	9968049	-	promoter
3	LOC_Os01g49700	hypothetical protein	gene	hypothetical protein	chr1	28560649	28560958	-	promoter
3	LOC_Os11g47339	unknown	gene	unknown	chr11	27955991	27956720	-	promoter
3	LOC_Os02g42374	e2f-associated phosphoprotein, putative, expressed	gene	e2f-associated phosphoprotein, putative, expressed	chr2	25486086	25488248	+	promoter
3	LOC_Os06g51470	expressed protein	gene	expressed protein	chr6	31178058	31178823	-	promoter
3	LOC_Os02g56170	inositol-1-monophosphatase, putative, expressed	gene	inositol-1-monophosphatase, putative, expressed	chr2	34356432	34359665	-	promoter
3	LOC_Os02g38490	expressed protein	gene	expressed protein	chr2	23266654	23268622	+	promoter
3	LOC_Os02g21310	expressed protein	gene	expressed protein	chr2	12649913	12651466	-	promoter
3	LOC_Os05g38640	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	gene	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	chr5	22594267	22595476	-	promoter
3	LOC_Os02g35610	expressed protein	gene	expressed protein	chr2	21412225	21412425	+	promoter,downstream
3	LOC_Os02g54020	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr2	33078508	33088002	-	promoter
3	LOC_Os01g19840	60S ribosomal protein L29-2, putative, expressed	gene	60S ribosomal protein L29-2, putative, expressed	chr1	11248630	11250208	-	promoter
3	LOC_Os08g43950	carrier, putative	gene	carrier, putative	chr8	27683704	27684870	+	promoter
3	LOC_Os12g03601	expressed protein	gene	expressed protein	chr12	1444553	1445381	-	promoter
3	LOC_Os02g21780	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr2	12944745	12946019	+	promoter
3	LOC_Os12g43670	ergosterol biosynthetic protein 28, putative, expressed	gene	ergosterol biosynthetic protein 28, putative, expressed	chr12	27098644	27101176	-	promoter
3	LOC_Os05g15730	retrotransposon, putative, centromere-specific	gene	retrotransposon, putative, centromere-specific	chr5	8886811	8889326	-	promoter
3	LOC_Os04g50110	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr4	29702942	29706064	-	promoter
3	LOC_Os03g59250	expressed protein	gene	expressed protein	chr3	33730324	33732371	-	promoter
3	LOC_Os07g31660	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	18805655	18806800	-	promoter,downstream
3	LOC_Os01g01340	light-induced protein 1-like, putative, expressed	gene	light-induced protein 1-like, putative, expressed	chr1	167470	169389	-	promoter
3	LOC_Os11g14400	polygalacturonase, putative, expressed	gene	polygalacturonase, putative, expressed	chr11	8080728	8082267	-	promoter
3	LOC_Os11g13890	chlorophyll A-B binding protein, putative, expressed	gene	chlorophyll A-B binding protein, putative, expressed	chr11	7655427	7658026	+	promoter
3	LOC_Os03g04110	lysM domain-containing GPI-anchored protein precursor, putative, expressed	gene	lysM domain-containing GPI-anchored protein precursor, putative, expressed	chr3	1877902	1880750	+	promoter
3	LOC_Os01g61240	gamma-interferon-inducible lysosomal thiol reductase precursor, putative	gene	gamma-interferon-inducible lysosomal thiol reductase precursor, putative	chr1	35432858	35434752	+	promoter
3	LOC_Os04g39910	receptor-like protein kinase, putative	gene	receptor-like protein kinase, putative	chr4	23584929	23587313	+	promoter
3	LOC_Os03g13800	ribosomal protein L7Ae, putative, expressed	gene	ribosomal protein L7Ae, putative, expressed	chr3	7475176	7477174	+	promoter,downstream
3	LOC_Os02g10940	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr2	5812094	5813493	-	promoter
3	LOC_Os03g50580	expressed protein	gene	expressed protein	chr3	28875568	28875912	+	promoter
3	LOC_Os06g39875	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr6	23688556	23690743	+	promoter
3	LOC_Os03g02610	glycosyl hydrolases family 16 protein, protein, expressed	gene	glycosyl hydrolases family 16 protein, protein, expressed	chr3	963178	964336	+	promoter
3	LOC_Os02g42720	hypothetical protein	gene	hypothetical protein	chr2	25683447	25684411	-	promoter
3	LOC_Os09g10780	expressed protein	gene	expressed protein	chr9	5882560	5883196	-	promoter
3	LOC_Os08g04190	homeobox and START domains containing protein, putative, expressed	gene	homeobox and START domains containing protein, putative, expressed	chr8	2033457	2036507	-	promoter
3	LOC_Os07g04570	RNA recognition motif containing protein, putative	gene	RNA recognition motif containing protein, putative	chr7	2031714	2032742	+	promoter
3	LOC_Os04g49610	expressed protein	gene	expressed protein	chr4	29398703	29400543	-	promoter
3	LOC_Os08g15010	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr8	9051370	9057410	+	promoter
3	LOC_Os06g12680	RING-H2 finger protein, putative, expressed	gene	RING-H2 finger protein, putative, expressed	chr6	6922216	6923998	-	promoter
3	LOC_Os02g12610	hsp20/alpha crystallin family protein, putative, expressed	gene	hsp20/alpha crystallin family protein, putative, expressed	chr2	6587089	6588245	-	promoter
3	LOC_Os04g55505	expressed protein	gene	expressed protein	chr4	32829388	32830381	-	promoter
3	LOC_Os01g60800	expressed protein	gene	expressed protein	chr1	35155371	35158162	+	promoter
3	LOC_Os06g42120	sulfotransferase domain containing protein, expressed	gene	sulfotransferase domain containing protein, expressed	chr6	25291063	25292336	-	promoter
3	LOC_Os05g22960	expressed protein	gene	expressed protein	chr5	13033603	13035632	-	promoter,downstream
3	LOC_Os03g24390	OsRhmbd8 - Putative Rhomboid homologue, expressed	gene	OsRhmbd8 - Putative Rhomboid homologue, expressed	chr3	13882392	13886616	-	promoter
3	LOC_Os02g45550	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr2	27708945	27714992	-	promoter
3	LOC_Os01g02360	resistance-related receptor-like kinase, putative, expressed	gene	resistance-related receptor-like kinase, putative, expressed	chr1	744452	747945	+	promoter
3	LOC_Os04g28170	expressed protein	gene	expressed protein	chr4	16467519	16470624	-	promoter
3	LOC_Os08g01910	expressed protein	gene	expressed protein	chr8	556358	557625	-	promoter
3	LOC_Os10g39680	CHIT14 - Chitinase family protein precursor, expressed	gene	CHIT14 - Chitinase family protein precursor, expressed	chr10	21134178	21136089	+	promoter
3	LOC_Os02g16500	expressed protein	gene	expressed protein	chr2	9417103	9418631	-	promoter
3	LOC_Os03g10530	expressed protein	gene	expressed protein	chr3	5366519	5367101	-	promoter
3	LOC_Os05g29930	late embryogenesis abundant protein, putative, expressed	gene	late embryogenesis abundant protein, putative, expressed	chr5	17258299	17259420	-	promoter
3	LOC_Os03g23900	hypothetical protein	gene	hypothetical protein	chr3	13564905	13566323	-	promoter
3	LOC_Os03g11800	hypothetical protein	gene	hypothetical protein	chr3	6173978	6174355	+	promoter,downstream
3	LOC_Os05g29990	NAD dependent epimerase/dehydratase family domain containing protein, expressed	gene	NAD dependent epimerase/dehydratase family domain containing protein, expressed	chr5	17282799	17287265	-	promoter
3	LOC_Os09g02260	PPR repeat containing protein, putative, expressed	gene	PPR repeat containing protein, putative, expressed	chr9	914351	917134	-	promoter
3	LOC_Os06g45140	bZIP transcription factor domain containing protein, expressed	gene	bZIP transcription factor domain containing protein, expressed	chr6	27298917	27301143	-	promoter
3	LOC_Os01g19390	glycerol-3-phosphate acyltransferase, putative	gene	glycerol-3-phosphate acyltransferase, putative	chr1	10968307	10971857	-	promoter
3	LOC_Os01g60020	NAC domain transcription factor, putative, expressed	gene	NAC domain transcription factor, putative, expressed	chr1	34691787	34693348	-	promoter
3	LOC_Os01g18810	hypothetical protein	gene	hypothetical protein	chr1	10627367	10629517	-	promoter
3	LOC_Os06g36660	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr6	21544272	21545751	-	promoter
3	LOC_Os09g30290	conserved hypothetical protein	gene	conserved hypothetical protein	chr9	18444817	18445203	+	promoter
3	LOC_Os03g59770	EF hand family protein, putative, expressed	gene	EF hand family protein, putative, expressed	chr3	34029116	34029999	+	promoter
3	LOC_Os03g17890	hypothetical protein	gene	hypothetical protein	chr3	9964309	9964717	+	promoter
3	LOC_Os09g37870	hypothetical protein	gene	hypothetical protein	chr9	21833773	21835113	+	promoter
3	LOC_Os06g07590	inactive receptor kinase At2g26730 precursor, putative	gene	inactive receptor kinase At2g26730 precursor, putative	chr6	3659018	3660324	-	promoter
3	LOC_Os06g42700	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr6	25679947	25681278	-	promoter
3	LOC_Os06g18910	hypothetical protein	gene	hypothetical protein	chr6	10742132	10743460	+	promoter
3	LOC_Os11g02000	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr11	531995	534277	-	promoter
3	LOC_Os06g12470	retrotransposon protein, putative, Ty3-gypsy subclass, expressed	gene	retrotransposon protein, putative, Ty3-gypsy subclass, expressed	chr6	6763464	6771922	-	promoter
3	LOC_Os02g20850	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr2	12324543	12326740	-	promoter
3	LOC_Os01g42440	hypothetical protein	gene	hypothetical protein	chr1	24129475	24129747	-	promoter
3	LOC_Os03g13600	ZOS3-07 - C2H2 zinc finger protein, expressed	gene	ZOS3-07 - C2H2 zinc finger protein, expressed	chr3	7352030	7354815	-	promoter
3	LOC_Os05g24150	tetratricopeptide-like helical, putative, expressed	gene	tetratricopeptide-like helical, putative, expressed	chr5	13871720	13875247	-	promoter
3	LOC_Os07g04709	unknown	gene	unknown	chr7	2091548	2092705	-	promoter
3	LOC_Os03g17500	expressed protein	gene	expressed protein	chr3	9724207	9726480	-	promoter
3	LOC_Os12g02105	LTPL58 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	gene	LTPL58 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	chr12	637489	638232	+	promoter,downstream
3	LOC_Os09g36120	expressed protein	gene	expressed protein	chr9	20797403	20798055	-	promoter,downstream
3	LOC_Os01g37050	ribonuclease III domain protein, putative, expressed	gene	ribonuclease III domain protein, putative, expressed	chr1	20664417	20670052	-	promoter
3	LOC_Os11g11790	NBS-LRR type disease resistance protein, putative, expressed	gene	NBS-LRR type disease resistance protein, putative, expressed	chr11	6537676	6541779	-	promoter
3	LOC_Os08g03320	OsFBDUF41 - F-box and DUF domain containing protein, expressed	gene	OsFBDUF41 - F-box and DUF domain containing protein, expressed	chr8	1539795	1541334	-	promoter
3	LOC_Os04g31820	hypothetical protein	gene	hypothetical protein	chr4	18889882	18890091	-	promoter
3	LOC_Os04g59010	F-box domain containing protein, expressed	gene	F-box domain containing protein, expressed	chr4	34919916	34921737	-	promoter
3	LOC_Os06g37600	expressed protein	gene	expressed protein	chr6	22259998	22261041	+	promoter
3	LOC_Os03g33030	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr3	18892120	18894145	-	promoter
3	LOC_Os01g53470	harpin-induced protein 1 domain containing protein, expressed	gene	harpin-induced protein 1 domain containing protein, expressed	chr1	30717886	30718913	+	promoter
3	LOC_Os05g03150	expressed protein	gene	expressed protein	chr5	1259206	1261977	-	promoter
3	LOC_Os08g40870	pentatricopeptide repeat protein, putative, expressed	gene	pentatricopeptide repeat protein, putative, expressed	chr8	25854446	25855627	-	promoter,downstream
3	LOC_Os01g08870	hypothetical protein	gene	hypothetical protein	chr1	4452717	4453004	+	promoter
3	LOC_Os06g19220	hypothetical protein	gene	hypothetical protein	chr6	10935352	10935744	-	promoter
3	LOC_Os01g57910	KH domain containing protein, putative, expressed	gene	KH domain containing protein, putative, expressed	chr1	33481247	33483159	-	promoter
3	LOC_Os08g32880	disease resistance protein RPM1, putative	gene	disease resistance protein RPM1, putative	chr8	20386851	20389574	+	promoter
3	LOC_Os03g26100	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr3	14953512	14954186	+	promoter,downstream
3	LOC_Os02g13304	expressed protein	gene	expressed protein	chr2	7088833	7089730	-	promoter
3	LOC_Os03g50110	transcription regulator, putative, expressed	gene	transcription regulator, putative, expressed	chr3	28578299	28579768	-	promoter
3	LOC_Os03g59780	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr3	34039151	34039759	-	promoter
3	LOC_Os04g34200	hypothetical protein	gene	hypothetical protein	chr4	20552281	20553192	+	promoter,downstream
3	LOC_Os02g46970	AMP-binding domain containing protein, expressed	gene	AMP-binding domain containing protein, expressed	chr2	28671334	28675033	-	promoter
3	LOC_Os03g06630	heat stress transcription factor, putative, expressed	gene	heat stress transcription factor, putative, expressed	chr3	3341250	3343544	+	promoter
3	LOC_Os01g71114	disease resistance protein RGA4, putative, expressed	gene	disease resistance protein RGA4, putative, expressed	chr1	41158264	41162779	-	promoter
3	LOC_Os08g09380	OsFBX263 - F-box domain containing protein, expressed	gene	OsFBX263 - F-box domain containing protein, expressed	chr8	5440422	5441918	-	promoter
3	LOC_Os12g41300	OsFBX462 - F-box domain containing protein	gene	OsFBX462 - F-box domain containing protein	chr12	25578869	25580708	-	promoter
3	LOC_Os03g16030	hsp20/alpha crystallin family protein, putative, expressed	gene	hsp20/alpha crystallin family protein, putative, expressed	chr3	8833761	8834740	+	promoter
3	LOC_Os11g06590	alcohol dehydrogenase GroES-like domain containing protein, expressed	gene	alcohol dehydrogenase GroES-like domain containing protein, expressed	chr11	3179297	3180072	-	promoter
3	LOC_Os11g35040	aminotransferase, classes I and II, domain containing protein, expressed	gene	aminotransferase, classes I and II, domain containing protein, expressed	chr11	20059473	20063159	-	promoter
3	LOC_Os01g50870	conserved hypothetical protein	gene	conserved hypothetical protein	chr1	29222143	29222454	-	promoter
3	LOC_Os01g67314	expressed protein	gene	expressed protein	chr1	39069089	39071625	-	promoter
3	LOC_Os01g16020	FAD binding domain containing protein, expressed	gene	FAD binding domain containing protein, expressed	chr1	9017144	9018762	+	promoter,downstream
3	LOC_Os02g55470	alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, putative	gene	alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, putative	chr2	33965501	33966817	+	promoter,downstream
3	LOC_Os10g30760	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr10	15950516	15953277	-	promoter
3	LOC_Os03g20650	bZIP transcription factor domain containing protein, expressed	gene	bZIP transcription factor domain containing protein, expressed	chr3	11682162	11683053	-	promoter
3	LOC_Os09g39710	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr9	22784556	22786281	+	promoter
3	LOC_Os12g34510	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	gene	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	chr12	20854734	20855670	-	promoter
3	LOC_Os03g50160	plastocyanin-like domain containing protein, putative, expressed	gene	plastocyanin-like domain containing protein, putative, expressed	chr3	28597485	28599378	-	promoter
3	LOC_Os11g25240	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr11	13918325	13920552	-	promoter
3	LOC_Os02g01930	expressed protein	gene	expressed protein	chr2	502785	504038	-	promoter
3	LOC_Os06g15995	expressed protein	gene	expressed protein	chr6	9096131	9097555	-	promoter
3	LOC_Os06g39660	FAD binding domain containing protein, expressed	gene	FAD binding domain containing protein, expressed	chr6	23548716	23551685	+	promoter
3	LOC_Os04g19260	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr4	10691151	10695598	-	promoter
3	LOC_Os06g06130	glutamate receptor, putative	gene	glutamate receptor, putative	chr6	2835447	2840617	-	promoter
3	LOC_Os08g20644	hypothetical protein	gene	hypothetical protein	chr8	12406640	12407104	-	promoter
3	LOC_Os01g70100	zinc finger DHHC domain-containing protein, putative, expressed	gene	zinc finger DHHC domain-containing protein, putative, expressed	chr1	40565617	40568734	-	promoter
3	LOC_Os02g43770	DUF630/DUF632 domains containing protein, putative, expressed	gene	DUF630/DUF632 domains containing protein, putative, expressed	chr2	26403771	26406232	-	promoter
3	LOC_Os03g09300	pumilio-family RNA binding repeat containing protein	gene	pumilio-family RNA binding repeat containing protein	chr3	4857140	4859375	+	promoter
3	LOC_Os05g38530	DnaK family protein, putative, expressed	gene	DnaK family protein, putative, expressed	chr5	22536798	22540022	-	promoter
3	LOC_Os02g21640	expressed protein	gene	expressed protein	chr2	12852007	12852960	+	promoter
3	LOC_Os05g28210	small hydrophilic plant seed protein, putative, expressed	gene	small hydrophilic plant seed protein, putative, expressed	chr5	16461056	16461978	-	promoter
3	LOC_Os03g18850	pathogenesis-related Bet v I family protein, putative, expressed	gene	pathogenesis-related Bet v I family protein, putative, expressed	chr3	10561147	10562195	+	promoter
3	LOC_Os04g54510	mTERF family protein, expressed	gene	mTERF family protein, expressed	chr4	32239057	32240509	-	promoter
3	LOC_Os07g48370	glycosyl transferase, family 8, putative, expressed	gene	glycosyl transferase, family 8, putative, expressed	chr7	28907961	28913105	+	promoter
3	LOC_Os07g42632	folic acid synthesis protein, putative, expressed	gene	folic acid synthesis protein, putative, expressed	chr7	25523497	25525940	+	promoter,downstream
3	LOC_Os01g62050	hypothetical protein	gene	hypothetical protein	chr1	35907442	35908064	-	promoter
3	LOC_Os09g28820	hypothetical protein	gene	hypothetical protein	chr9	17502556	17503250	-	promoter
3	LOC_Os06g07914	hydroxylase, putative, expressed	gene	hydroxylase, putative, expressed	chr6	3845107	3847326	+	promoter
3	LOC_Os02g02630	THION20 - Plant thionin family protein precursor, putative	gene	THION20 - Plant thionin family protein precursor, putative	chr2	965931	966388	-	promoter
3	LOC_Os06g47910	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr6	28980126	28982438	-	promoter
3	LOC_Os04g37760	expressed protein	gene	expressed protein	chr4	22262914	22265425	+	promoter
3	LOC_Os11g28440	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr11	15909888	15911328	+	promoter
3	LOC_Os10g36770	hypothetical protein	gene	hypothetical protein	chr10	19611868	19612272	-	promoter
3	LOC_Os09g33640	expressed protein	gene	expressed protein	chr9	19867717	19868313	+	promoter
3	LOC_Os04g24710	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	gene	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	chr4	14176593	14178503	-	promoter
3	LOC_Os12g42090	methyltransferase domain containing protein, putative, expressed	gene	methyltransferase domain containing protein, putative, expressed	chr12	26067233	26069952	-	promoter,downstream
3	LOC_Os05g26049	conserved hypothetical protein	gene	conserved hypothetical protein	chr5	15101015	15101977	-	promoter
3	LOC_Os06g08320	60S ribosomal protein L39, putative, expressed	gene	60S ribosomal protein L39, putative, expressed	chr6	4032796	4033130	-	promoter
3	LOC_Os10g20780	retrotransposon, putative, centromere-specific	gene	retrotransposon, putative, centromere-specific	chr10	10470929	10471981	-	promoter
3	LOC_Os08g09700	OsFBX270 - F-box domain containing protein, expressed	gene	OsFBX270 - F-box domain containing protein, expressed	chr8	5601625	5606320	+	promoter
3	LOC_Os01g46070	lactate/malate dehydrogenase, putative, expressed	gene	lactate/malate dehydrogenase, putative, expressed	chr1	26189708	26193473	+	promoter
3	LOC_Os09g29820	bZIP transcription factor domain containing protein, expressed	gene	bZIP transcription factor domain containing protein, expressed	chr9	18121579	18122464	-	promoter,downstream
3	LOC_Os03g27880	tetratricopeptide-like helical, putative	gene	tetratricopeptide-like helical, putative	chr3	16015140	16017386	-	promoter
3	LOC_Os01g61510	ammonium transporter protein, putative, expressed	gene	ammonium transporter protein, putative, expressed	chr1	35584822	35587334	-	promoter
3	LOC_Os07g14100	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr7	8042468	8044196	-	promoter
3	LOC_Os08g43460	expressed protein	gene	expressed protein	chr8	27489682	27491787	+	promoter
3	LOC_Os01g05064	expressed protein	gene	expressed protein	chr1	2376322	2376980	-	promoter,downstream
3	LOC_Os02g56334	OsWAK18b - OsWAK short gene, expressed	gene	OsWAK18b - OsWAK short gene, expressed	chr2	34478127	34480226	+	promoter
3	LOC_Os07g08210	cytidylyltransferase domain containing protein, expressed	gene	cytidylyltransferase domain containing protein, expressed	chr7	4184206	4187036	-	promoter
3	LOC_Os08g29380	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr8	18022137	18022409	-	promoter
3	LOC_Os01g12350	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr1	6746476	6749728	+	promoter
3	LOC_Os06g04630	conserved hypothetical protein	gene	conserved hypothetical protein	chr6	2020817	2021420	+	promoter
3	LOC_Os09g31400	ethylene-insensitive 3, putative, expressed	gene	ethylene-insensitive 3, putative, expressed	chr9	18881545	18885387	-	promoter
3	LOC_Os04g31760	expressed protein	gene	expressed protein	chr4	18832939	18833705	-	promoter
3	LOC_Os01g33730	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr1	18559400	18561067	-	promoter
3	LOC_Os03g24610	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	gene	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	chr3	14013978	14017360	+	promoter
3	LOC_Os06g08490	X0001, putative, expressed	gene	X0001, putative, expressed	chr6	4188067	4189564	-	promoter
3	LOC_Os08g25640	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr8	15597831	15602353	-	promoter
3	LOC_Os03g12020	50S ribosomal protein L15, chloroplast precursor, putative, expressed	gene	50S ribosomal protein L15, chloroplast precursor, putative, expressed	chr3	6294472	6296624	+	promoter,downstream
3	LOC_Os02g16730	expansin precursor, putative, expressed	gene	expansin precursor, putative, expressed	chr2	9551854	9553483	+	promoter
3	LOC_Os11g32460	hypothetical protein	gene	hypothetical protein	chr11	18695925	18696732	-	promoter
3	LOC_Os03g24880	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr3	14173215	14174956	-	promoter
3	LOC_Os02g58420	hypothetical protein	gene	hypothetical protein	chr2	35725387	35725647	+	promoter
3	LOC_Os01g51810	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr1	29785090	29787192	-	promoter
3	LOC_Os06g33610	cyclic nucleotide-gated ion channel 1, putative, expressed	gene	cyclic nucleotide-gated ion channel 1, putative, expressed	chr6	19563212	19568252	+	promoter,downstream
3	LOC_Os01g11550	TCP family transcription factor, putative, expressed	gene	TCP family transcription factor, putative, expressed	chr1	6220636	6223329	-	promoter
3	LOC_Os01g01650	isoflavone reductase homolog IRL, putative, expressed	gene	isoflavone reductase homolog IRL, putative, expressed	chr1	321556	322948	-	promoter
3	LOC_Os08g41220	BTB/POZ domain containing protein	gene	BTB/POZ domain containing protein	chr8	26025455	26029933	-	promoter
3	LOC_Os05g07140	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr5	3772377	3773169	+	promoter
3	LOC_Os03g51690	Homeobox domain containing protein, expressed	gene	Homeobox domain containing protein, expressed	chr3	29589317	29599901	-	promoter
3	LOC_Os04g58760	membrane associated DUF588 domain containing protein, putative, expressed	gene	membrane associated DUF588 domain containing protein, putative, expressed	chr4	34765356	34766616	+	promoter
3	LOC_Os01g55795	expressed protein	gene	expressed protein	chr1	32142718	32144241	-	promoter
3	LOC_Os03g53520	expressed protein	gene	expressed protein	chr3	30687219	30688924	-	promoter
3	LOC_Os05g31070	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr5	17996988	18001544	-	promoter
3	LOC_Os09g39230	prephenate dehydratase domain containing protein, expressed	gene	prephenate dehydratase domain containing protein, expressed	chr9	22541703	22543384	+	promoter
3	LOC_Os06g40770	expressed protein	gene	expressed protein	chr6	24296299	24298143	-	promoter
3	LOC_Os06g50060	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr6	30335261	30335938	-	promoter
3	LOC_Os01g10090	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr1	5260189	5261898	-	promoter,downstream
3	LOC_Os07g23280	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr7	13121460	13122110	+	promoter
3	LOC_Os05g30880	nucleolar matrix protein-related, putative, expressed	gene	nucleolar matrix protein-related, putative, expressed	chr5	17871504	17872979	-	promoter
3	LOC_Os06g01990	phosphoglycolate phosphatase, plasmid, putative, expressed	gene	phosphoglycolate phosphatase, plasmid, putative, expressed	chr6	554519	555548	-	promoter
3	LOC_Os01g73420	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr1	42546555	42547947	+	promoter
3	LOC_Os01g05230	hypothetical protein	gene	hypothetical protein	chr1	2456984	2457452	+	promoter
3	LOC_Os09g37050	RING-H2 finger protein ATL2B, putative, expressed	gene	RING-H2 finger protein ATL2B, putative, expressed	chr9	21370128	21371895	-	promoter
3	LOC_Os01g32849	expressed protein	gene	expressed protein	chr1	18025458	18029343	-	promoter
3	LOC_Os09g10830	hypothetical protein	gene	hypothetical protein	chr9	5905970	5906501	-	promoter
3	LOC_Os08g06440	secretory carrier-associated membrane protein 5, putative, expressed	gene	secretory carrier-associated membrane protein 5, putative, expressed	chr8	3615627	3617822	+	promoter
3	LOC_Os03g11150	hypothetical protein	gene	hypothetical protein	chr3	5745981	5747305	-	promoter
3	LOC_Os03g44440	cyclic nucleotide-gated ion channel, putative, expressed	gene	cyclic nucleotide-gated ion channel, putative, expressed	chr3	25001744	25006086	+	promoter,downstream
3	LOC_Os01g40710	high light inducible protein, putative, expressed	gene	high light inducible protein, putative, expressed	chr1	23002627	23003966	+	promoter,downstream
3	LOC_Os06g24890	hypothetical protein	gene	hypothetical protein	chr6	14597471	14598720	-	promoter
3	LOC_Os01g51230	IQ calmodulin-binding motif domain containing protein, expressed	gene	IQ calmodulin-binding motif domain containing protein, expressed	chr1	29446945	29449409	-	promoter
3	LOC_Os12g11870	expressed protein	gene	expressed protein	chr12	6462415	6463119	+	promoter
3	LOC_Os07g41260	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr7	24723568	24727186	+	promoter
3	LOC_Os12g41260	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr12	25549599	25552790	+	promoter
3	LOC_Os01g01320	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr1	156728	159941	-	promoter
3	LOC_Os01g62220	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr1	36010607	36011977	+	promoter,downstream
3	LOC_Os02g34700	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	20810233	20811993	+	promoter,downstream
3	LOC_Os03g17960	expressed protein	gene	expressed protein	chr3	9998569	10001672	+	promoter
3	LOC_Os01g55600	peptide transporter PTR2, putative, expressed	gene	peptide transporter PTR2, putative, expressed	chr1	32031642	32033967	-	promoter
3	LOC_Os01g34980	hypothetical protein	gene	hypothetical protein	chr1	19358630	19359367	-	promoter
3	LOC_Os12g03140	hypothetical protein	gene	hypothetical protein	chr12	1191232	1192383	-	promoter
3	LOC_Os07g06420	hypothetical protein	gene	hypothetical protein	chr7	3114458	3114676	+	promoter
3	LOC_Os05g01444	polygalacturonase inhibitor precursor, putative, expressed	gene	polygalacturonase inhibitor precursor, putative, expressed	chr5	256779	258432	+	promoter,downstream
3	LOC_Os05g48520	glyoxal oxidase-related, putative, expressed	gene	glyoxal oxidase-related, putative, expressed	chr5	27744441	27747174	-	promoter
3	LOC_Os09g26810	chlorophyll A-B binding protein, putative, expressed	gene	chlorophyll A-B binding protein, putative, expressed	chr9	16286915	16289861	+	promoter
3	LOC_Os10g02276	OsWAK96 - OsWAK receptor-like protein kinase	gene	OsWAK96 - OsWAK receptor-like protein kinase	chr10	815226	816179	+	promoter
3	LOC_Os03g05640	inorganic phosphate transporter, putative, expressed	gene	inorganic phosphate transporter, putative, expressed	chr3	2814434	2816363	-	promoter
3	LOC_Os09g29050	mitochondrial carrier protein, putative	gene	mitochondrial carrier protein, putative	chr9	17641594	17642559	-	promoter
3	LOC_Os02g43730	hypothetical protein	gene	hypothetical protein	chr2	26384935	26385175	+	promoter
3	LOC_Os04g32340	RNA-binding motif protein, putative, expressed	gene	RNA-binding motif protein, putative, expressed	chr4	19211410	19219675	-	promoter
3	LOC_Os01g51020	60S ribosomal protein L28-1, putative, expressed	gene	60S ribosomal protein L28-1, putative, expressed	chr1	29313138	29315867	+	promoter,downstream
3	LOC_Os08g43130	NAP1, putative, expressed	gene	NAP1, putative, expressed	chr8	27274982	27287820	-	promoter
3	LOC_Os02g49000	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr2	29958098	29966763	+	promoter
3	LOC_Os11g09870	hypothetical protein	gene	hypothetical protein	chr11	5280644	5280888	-	promoter
3	LOC_Os07g08410	expressed protein	gene	expressed protein	chr7	4317812	4319330	-	promoter
3	LOC_Os11g11350	embryogenesis transmembrane protein, putative, expressed	gene	embryogenesis transmembrane protein, putative, expressed	chr11	6292301	6296627	-	promoter
3	LOC_Os06g05610	OsFBDUF32 - F-box and DUF domain containing protein, expressed	gene	OsFBDUF32 - F-box and DUF domain containing protein, expressed	chr6	2536904	2538472	+	promoter
3	LOC_Os12g40450	biotin--protein ligase, putative, expressed	gene	biotin--protein ligase, putative, expressed	chr12	24996227	24998783	-	promoter
3	LOC_Os05g18780	rpp14 family protein	gene	rpp14 family protein	chr5	10902272	10905311	-	promoter
3	LOC_Os03g16990	hypothetical protein	gene	hypothetical protein	chr3	9439915	9440630	-	promoter
3	LOC_Os06g47720	serine/threonine-protein kinase BRI1-like 2 precursor, putative	gene	serine/threonine-protein kinase BRI1-like 2 precursor, putative	chr6	28873840	28877070	-	promoter
3	LOC_Os01g74152	haloacid dehalogenase-like hydrolase family protein, putative, expressed	gene	haloacid dehalogenase-like hydrolase family protein, putative, expressed	chr1	42953119	42955602	+	promoter
3	LOC_Os03g53780	ammonium transporter 2, putative	gene	ammonium transporter 2, putative	chr3	30823328	30824822	+	promoter
3	LOC_Os01g56480	expressed protein	gene	expressed protein	chr1	32546066	32546662	-	promoter
3	LOC_Os09g01700	conserved hypothetical protein	gene	conserved hypothetical protein	chr9	493816	496572	-	promoter
3	LOC_Os11g20760	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr11	12007954	12013822	-	promoter
3	LOC_Os04g32070	dehydrogenase/reductase, putative, expressed	gene	dehydrogenase/reductase, putative, expressed	chr4	19061163	19063255	+	promoter
3	LOC_Os10g12300	expressed protein	gene	expressed protein	chr10	6861678	6862376	-	promoter
3	LOC_Os09g29210	purine permease, putative, expressed	gene	purine permease, putative, expressed	chr9	17747109	17750271	-	promoter
3	LOC_Os07g33954	transporter family protein, putative	gene	transporter family protein, putative	chr7	20294869	20296862	-	promoter
3	LOC_Os05g47480	transcription initiation factor IIB, putative, expressed	gene	transcription initiation factor IIB, putative, expressed	chr5	27138457	27139949	-	promoter
3	LOC_Os07g01070	peptide transporter, putative, expressed	gene	peptide transporter, putative, expressed	chr7	41657	43577	+	promoter
3	LOC_Os05g38990	CCT motif family protein, expressed	gene	CCT motif family protein, expressed	chr5	22811684	22813259	-	promoter
3	LOC_Os03g41330	DUF260 domain containing protein, putative, expressed	gene	DUF260 domain containing protein, putative, expressed	chr3	22975443	22978424	-	promoter
3	LOC_Os02g40020	hypothetical protein	gene	hypothetical protein	chr2	24222964	24223346	-	promoter
3	LOC_Os09g39650	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr9	22752823	22757027	+	promoter
3	LOC_Os06g19670	OsFBX196 - F-box domain containing protein	gene	OsFBX196 - F-box domain containing protein	chr6	11227951	11232370	-	promoter
3	LOC_Os01g58800	expressed protein	gene	expressed protein	chr1	33975493	33976282	-	promoter
3	LOC_Os07g10840	uncharacterized glycosyltransferase, putative, expressed	gene	uncharacterized glycosyltransferase, putative, expressed	chr7	5889559	5893136	-	promoter
3	LOC_Os06g08570	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr6	4265427	4269772	-	promoter
3	LOC_Os01g12300	unknown	gene	unknown	chr1	6714521	6715305	+	promoter,downstream
3	LOC_Os10g40080	conserved hypothetical protein	gene	conserved hypothetical protein	chr10	21390831	21391812	-	promoter
3	LOC_Os05g07960	F-box protein interaction domain containing protein, expressed	gene	F-box protein interaction domain containing protein, expressed	chr5	4312510	4314335	-	promoter
3	LOC_Os09g02750	expressed protein	gene	expressed protein	chr9	1239588	1242978	-	promoter
3	LOC_Os11g29910	plastocyanin-like domain containing protein, putative	gene	plastocyanin-like domain containing protein, putative	chr11	16917746	16918460	+	promoter,downstream
3	LOC_Os05g28970	hypothetical protein	gene	hypothetical protein	chr5	16926688	16928504	+	promoter,downstream
3	LOC_Os05g41490	circadian clock coupling factor ZGT, putative, expressed	gene	circadian clock coupling factor ZGT, putative, expressed	chr5	24228889	24230277	-	promoter
3	LOC_Os11g40780	disease resistance protein, putative	gene	disease resistance protein, putative	chr11	23921124	23924288	-	promoter
3	LOC_Os03g51090	OsFBDUF17 - F-box and DUF domain containing protein, expressed	gene	OsFBDUF17 - F-box and DUF domain containing protein, expressed	chr3	29202995	29205256	+	promoter,downstream
3	LOC_Os09g25060	OsWRKY76 - Superfamily of TFs having WRKY and zinc finger domains, expressed	gene	OsWRKY76 - Superfamily of TFs having WRKY and zinc finger domains, expressed	chr9	14974931	14976712	-	promoter
3	LOC_Os11g24790	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr11	13666757	13668570	+	promoter
3	LOC_Os03g53730	flavoprotein wrbA, putative, expressed	gene	flavoprotein wrbA, putative, expressed	chr3	30800535	30801596	-	promoter,downstream
3	LOC_Os03g37960	acyl CoA binding protein, putative	gene	acyl CoA binding protein, putative	chr3	21081371	21083041	-	promoter,downstream
3	LOC_Os07g42510	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr7	25439824	25441701	-	promoter
3	LOC_Os02g51404	expressed protein	gene	expressed protein	chr2	31478044	31478630	-	promoter
3	LOC_Os09g33720	protein transport protein Sec61, putative, expressed	gene	protein transport protein Sec61, putative, expressed	chr9	19917004	19919828	+	promoter
3	LOC_Os03g62290	expressed protein	gene	expressed protein	chr3	35281499	35282270	-	promoter
3	LOC_Os08g41680	expressed protein	gene	expressed protein	chr8	26309826	26311139	-	promoter,downstream
3	LOC_Os07g34006	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr7	20312837	20315233	-	promoter
3	LOC_Os01g08780	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	gene	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	chr1	4401620	4406292	-	promoter
3	LOC_Os05g02750	ABC transporter, membrane-spanning/permease subunit, putative, expressed	gene	ABC transporter, membrane-spanning/permease subunit, putative, expressed	chr5	989726	990571	+	promoter
3	LOC_Os01g22000	expressed protein	gene	expressed protein	chr1	12350428	12352037	-	promoter
3	LOC_Os04g44080	hypothetical protein	gene	hypothetical protein	chr4	25921357	25921942	+	promoter
3	LOC_Os05g06850	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr5	3587051	3589967	+	promoter
3	LOC_Os06g42740	hypothetical protein	gene	hypothetical protein	chr6	25703044	25704021	+	promoter
3	LOC_Os02g19280	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr2	11265363	11271755	+	promoter
3	LOC_Os11g28170	expressed protein	gene	expressed protein	chr11	15734011	15735602	-	promoter
3	LOC_Os12g13100	WW domain containing protein, expressed	gene	WW domain containing protein, expressed	chr12	7283319	7284990	+	promoter,downstream
3	LOC_Os01g72900	abscisic stress-ripening, putative, expressed	gene	abscisic stress-ripening, putative, expressed	chr1	42280228	42280929	-	promoter
3	LOC_Os12g01955	expressed protein	gene	expressed protein	chr12	565349	566783	-	promoter
3	LOC_Os03g08720	transferase family protein, putative, expressed	gene	transferase family protein, putative, expressed	chr3	4491086	4493122	-	promoter
3	LOC_Os08g38060	RING finger protein, putative, expressed	gene	RING finger protein, putative, expressed	chr8	24110293	24111538	-	promoter
3	LOC_Os05g47520	hypothetical protein	gene	hypothetical protein	chr5	27160057	27160999	-	promoter,downstream
3	LOC_Os02g01730	serine/threonine-protein kinase At1g18390 precursor, putative, expressed	gene	serine/threonine-protein kinase At1g18390 precursor, putative, expressed	chr2	404245	406691	-	promoter
3	LOC_Os03g25080	OsFBX86 - F-box domain containing protein, expressed	gene	OsFBX86 - F-box domain containing protein, expressed	chr3	14322473	14324379	-	promoter
3	LOC_Os09g37110	hypothetical protein	gene	hypothetical protein	chr9	21398391	21401460	-	promoter
3	LOC_Os02g42340	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	25457845	25458289	-	promoter
3	LOC_Os12g42739	expressed protein	gene	expressed protein	chr12	26527337	26528427	-	promoter
3	LOC_Os04g12570	hypothetical protein	gene	hypothetical protein	chr4	6954495	6954887	-	promoter
3	LOC_Os05g44070	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr5	25562523	25564589	-	promoter
3	LOC_Os10g09290	expressed protein	gene	expressed protein	chr10	5041251	5043855	-	promoter
3	LOC_Os10g41720	peroxidase precursor, putative, expressed	gene	peroxidase precursor, putative, expressed	chr10	22386188	22389234	-	promoter
3	LOC_Os01g18370	hypothetical protein	gene	hypothetical protein	chr1	10315059	10317485	-	promoter
3	LOC_Os06g44920	OsFBDUF34 - F-box and DUF domain containing protein	gene	OsFBDUF34 - F-box and DUF domain containing protein	chr6	27153896	27155263	+	promoter
3	LOC_Os08g30830	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr8	19031245	19032443	+	promoter
3	LOC_Os12g40150	expressed protein	gene	expressed protein	chr12	24793200	24794916	-	promoter
3	LOC_Os05g45670	expressed protein	gene	expressed protein	chr5	26404895	26406505	-	promoter
3	LOC_Os06g49470	peptidyl-prolyl cis-trans isomerase, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, putative, expressed	chr6	29970001	29972197	+	promoter
3	LOC_Os06g41740	transposon protein, putative, CACTA, En/Spm sub-class	gene	transposon protein, putative, CACTA, En/Spm sub-class	chr6	25019460	25020425	-	promoter
3	LOC_Os09g20650	OsFBX323 - F-box domain containing protein, expressed	gene	OsFBX323 - F-box domain containing protein, expressed	chr9	12435989	12438215	-	promoter
3	LOC_Os12g35070	hypothetical protein	gene	hypothetical protein	chr12	21304060	21304768	-	promoter
3	LOC_Os04g35870	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr4	21686863	21691668	+	promoter
3	LOC_Os02g55980	vacuolar protein sorting 55 family protein, putative, expressed	gene	vacuolar protein sorting 55 family protein, putative, expressed	chr2	34254094	34257219	-	promoter
3	LOC_Os06g38594	expressed protein	gene	expressed protein	chr6	22865813	22866524	-	promoter
3	LOC_Os05g28880	hypothetical protein	gene	hypothetical protein	chr5	16873355	16873603	+	promoter
3	LOC_Os05g46640	hypothetical protein	gene	hypothetical protein	chr5	26936993	26937978	+	promoter
3	LOC_Os06g09180	OsMKK5 - putative MAPKK based on amino acid sequence homology, expressed	gene	OsMKK5 - putative MAPKK based on amino acid sequence homology, expressed	chr6	4615609	4617212	+	promoter
3	LOC_Os04g41875	oxidoreductase, short chain dehydrogenase/reductase domain containing protein	gene	oxidoreductase, short chain dehydrogenase/reductase domain containing protein	chr4	24630225	24630928	-	promoter
3	LOC_Os02g13780	receptor-like protein kinase 2 precursor, putative	gene	receptor-like protein kinase 2 precursor, putative	chr2	7434644	7438310	-	promoter
3	LOC_Os12g42900	lysine-rich arabinogalactan protein 19 precursor, putative, expressed	gene	lysine-rich arabinogalactan protein 19 precursor, putative, expressed	chr12	26629559	26631216	-	promoter
3	LOC_Os03g08380	ABC transporter, ATP-binding protein, putative, expressed	gene	ABC transporter, ATP-binding protein, putative, expressed	chr3	4278464	4283887	+	promoter
3	LOC_Os03g26010	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr3	14906232	14907607	-	promoter
3	LOC_Os02g46820	hypothetical protein	gene	hypothetical protein	chr2	28570301	28570888	+	promoter
3	LOC_Os04g58870	exo70 exocyst complex subunit, putative, expressed	gene	exo70 exocyst complex subunit, putative, expressed	chr4	34831477	34835678	-	promoter,downstream
3	LOC_Os08g45230	ENTH domain containing protein, expressed	gene	ENTH domain containing protein, expressed	chr8	28396906	28398665	+	promoter,downstream
3	LOC_Os01g08350	ATP synthase subunit alpha, mitochondrial, putative	gene	ATP synthase subunit alpha, mitochondrial, putative	chr1	4094856	4095249	+	promoter
3	LOC_Os03g47940	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr3	27244991	27249622	+	promoter,downstream
3	LOC_Os01g67150	hypothetical protein	gene	hypothetical protein	chr1	38976568	38979188	-	promoter,downstream
3	LOC_Os09g34990	uncharacterized membrane protein, putative	gene	uncharacterized membrane protein, putative	chr9	20383626	20387289	-	promoter
3	LOC_Os03g48120	BTB/POZ domain containing protein, putative	gene	BTB/POZ domain containing protein, putative	chr3	27363172	27364104	-	promoter,downstream
3	LOC_Os09g37380	OsSAUR42 - Auxin-responsive SAUR gene family member	gene	OsSAUR42 - Auxin-responsive SAUR gene family member	chr9	21579431	21579853	+	promoter
3	LOC_Os12g40120	B3 DNA binding domain containing protein, expressed	gene	B3 DNA binding domain containing protein, expressed	chr12	24784505	24786501	-	promoter
3	LOC_Os03g25430	transcription regulator, putative, expressed	gene	transcription regulator, putative, expressed	chr3	14536818	14538297	-	promoter
3	LOC_Os03g43130	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr3	24053643	24056721	+	promoter
3	LOC_Os11g16590	ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B,chloroplast precursor, putative, expressed	gene	ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B,chloroplast precursor, putative, expressed	chr11	9187712	9193224	-	promoter
3	LOC_Os03g01840	knotted 1-binding protein 36, putative	gene	knotted 1-binding protein 36, putative	chr3	508213	509282	-	promoter
3	LOC_Os04g11790	OsFBX120 - F-box domain containing protein, expressed	gene	OsFBX120 - F-box domain containing protein, expressed	chr4	6450025	6451485	-	promoter
3	LOC_Os07g09920	disease resistance protein RPM1, putative	gene	disease resistance protein RPM1, putative	chr7	5280164	5282709	-	promoter
3	LOC_Os04g22300	expressed protein	gene	expressed protein	chr4	12621174	12622988	+	promoter
3	LOC_Os08g28850	hypothetical protein	gene	hypothetical protein	chr8	17636704	17637617	+	promoter
3	LOC_Os02g39960	exostosin family protein, putative	gene	exostosin family protein, putative	chr2	24157684	24159784	-	promoter,downstream
3	LOC_Os09g34020	expressed protein	gene	expressed protein	chr9	20082430	20082963	-	promoter,downstream
3	LOC_Os02g30240	expressed protein	gene	expressed protein	chr2	17975634	17976666	-	promoter
3	LOC_Os02g51000	CS domain containing protein, putative, expressed	gene	CS domain containing protein, putative, expressed	chr2	31188400	31191828	-	promoter
3	LOC_Os11g24610	60S ribosomal protein L38, putative, expressed	gene	60S ribosomal protein L38, putative, expressed	chr11	13580520	13582178	+	promoter
3	LOC_Os01g41020	hypothetical protein	gene	hypothetical protein	chr1	23226828	23231332	+	promoter
3	LOC_Os02g26310	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	15447076	15447835	-	promoter
3	LOC_Os09g38090	expressed protein	gene	expressed protein	chr9	21945461	21948545	+	promoter
3	LOC_Os03g32642	hypothetical protein	gene	hypothetical protein	chr3	18693293	18693749	-	promoter
3	LOC_Os07g40820	PPR repeat domain containing protein, putative	gene	PPR repeat domain containing protein, putative	chr7	24459898	24461442	-	promoter
3	LOC_Os06g11812	wound/stress protein, putative, expressed	gene	wound/stress protein, putative, expressed	chr6	6252189	6253518	-	promoter
3	LOC_Os02g10520	OsSub12 - Putative Subtilisin homologue, expressed	gene	OsSub12 - Putative Subtilisin homologue, expressed	chr2	5529942	5536941	-	promoter
3	LOC_Os12g35590	expressed protein	gene	expressed protein	chr12	21606948	21608267	-	promoter
3	LOC_Os12g37900	expressed protein	gene	expressed protein	chr12	23259922	23260701	+	promoter,downstream
3	LOC_Os07g33050	expressed protein	gene	expressed protein	chr7	19739392	19741863	-	promoter
3	LOC_Os03g17760	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr3	9876961	9879866	-	promoter
3	LOC_Os10g42760	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr10	22998229	23000156	-	promoter
3	LOC_Os05g02590	transferase family protein, putative	gene	transferase family protein, putative	chr5	903455	904675	-	promoter
3	LOC_Os01g36550	protein kinase family protein, putative	gene	protein kinase family protein, putative	chr1	20283402	20286420	+	promoter
3	LOC_Os02g56750	OsFBX65 - F-box domain containing protein, expressed	gene	OsFBX65 - F-box domain containing protein, expressed	chr2	34788376	34790769	+	promoter
3	LOC_Os01g16340	expressed protein	gene	expressed protein	chr1	9263978	9267482	+	promoter,downstream
3	LOC_Os09g39600	hypothetical protein	gene	hypothetical protein	chr9	22729270	22730277	+	promoter
3	LOC_Os01g47635	expressed protein	gene	expressed protein	chr1	27247116	27248787	-	promoter
3	LOC_Os10g37230	expressed protein	gene	expressed protein	chr10	19844187	19845452	-	promoter
3	LOC_Os01g36600	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr1	20311900	20313135	-	promoter,downstream
3	LOC_Os10g38954	hypothetical protein	gene	hypothetical protein	chr10	20688081	20689373	-	promoter
3	LOC_Os03g18880	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr3	10574314	10575616	-	promoter
3	LOC_Os08g35520	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr8	22380612	22386862	-	promoter
3	LOC_Os02g47510	9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed	gene	9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed	chr2	29020201	29022390	-	promoter
3	LOC_Os03g08150	Cupin domain containing protein, expressed	gene	Cupin domain containing protein, expressed	chr3	4156591	4157514	+	promoter
3	LOC_Os02g51580	hypothetical protein	gene	hypothetical protein	chr2	31588693	31589257	-	promoter
3	LOC_Os02g19870	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr2	11674414	11684362	-	promoter
3	LOC_Os08g31820	hypothetical protein	gene	hypothetical protein	chr8	19732008	19732472	-	promoter,downstream
3	LOC_Os08g43870	carrier, putative	gene	carrier, putative	chr8	27667225	27667929	+	promoter
3	LOC_Os02g48660	60S ribosomal protein L31, putative, expressed	gene	60S ribosomal protein L31, putative, expressed	chr2	29789564	29791376	-	promoter,downstream
3	LOC_Os10g30162	hsp20/alpha crystallin family protein, putative, expressed	gene	hsp20/alpha crystallin family protein, putative, expressed	chr10	15610305	15612385	+	promoter
3	LOC_Os11g24130	zinc-binding protein, putative	gene	zinc-binding protein, putative	chr11	13255287	13256432	+	promoter
3	LOC_Os04g53320	expressed protein	gene	expressed protein	chr4	31577606	31578402	+	promoter
3	LOC_Os06g06510	histone H3, putative, expressed	gene	histone H3, putative, expressed	chr6	3055089	3055862	+	promoter
3	LOC_Os10g28650	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr10	14860161	14865872	-	promoter
3	LOC_Os08g09760	OsFBX275 - F-box domain containing protein, expressed	gene	OsFBX275 - F-box domain containing protein, expressed	chr8	5637168	5642277	+	promoter
3	LOC_Os10g27480	expressed protein	gene	expressed protein	chr10	14422065	14425560	+	promoter,downstream
3	LOC_Os05g05570	agenet domain containing protein, putative	gene	agenet domain containing protein, putative	chr5	2765190	2765531	-	promoter
3	LOC_Os05g32820	peptide-N4-asparagine amidase A, putative, expressed	gene	peptide-N4-asparagine amidase A, putative, expressed	chr5	19159599	19161924	-	promoter
3	LOC_Os01g46850	expressed protein	gene	expressed protein	chr1	26721684	26723875	+	promoter
3	LOC_Os04g37820	cytokinin-O-glucosyltransferase 2, putative, expressed	gene	cytokinin-O-glucosyltransferase 2, putative, expressed	chr4	22296374	22298156	+	promoter
3	LOC_Os05g08420	expressed protein	gene	expressed protein	chr5	4593174	4594018	-	promoter
3	LOC_Os06g04140	expressed protein	gene	expressed protein	chr6	1730814	1731566	-	promoter
3	LOC_Os03g60540	ZOS3-20 - C2H2 zinc finger protein	gene	ZOS3-20 - C2H2 zinc finger protein	chr3	34403732	34404292	-	promoter
3	LOC_Os07g12480	receptor protein kinase, putative	gene	receptor protein kinase, putative	chr7	7109762	7111744	-	promoter
3	LOC_Os08g05550	expressed protein	gene	expressed protein	chr8	2968309	2970943	+	promoter
3	LOC_Os03g61040	GIL1, putative, expressed	gene	GIL1, putative, expressed	chr3	34667853	34669793	-	promoter
3	LOC_Os04g52950	nitrate-induced NOI protein, expressed	gene	nitrate-induced NOI protein, expressed	chr4	31356854	31357651	-	promoter
3	LOC_Os09g30079	unknown	gene	unknown	chr9	18288914	18289163	+	promoter
3	LOC_Os09g38990	subtilase, putative	gene	subtilase, putative	chr9	22387273	22390065	+	promoter
3	LOC_Os09g27240	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr9	16557394	16560779	-	promoter
3	LOC_Os07g35335	expressed protein	gene	expressed protein	chr7	21143796	21144987	-	promoter
3	LOC_Os02g02650	THION21 - Plant thionin family protein precursor, putative	gene	THION21 - Plant thionin family protein precursor, putative	chr2	975623	976077	-	promoter
3	LOC_Os02g33870	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr2	20180414	20183719	-	promoter
3	LOC_Os06g32590	hypothetical protein	gene	hypothetical protein	chr6	18952590	18953116	+	promoter
3	LOC_Os11g08850	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr11	4685094	4686462	+	promoter
3	LOC_Os02g12890	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr2	6802606	6805335	-	promoter
3	LOC_Os06g21400	hypothetical protein	gene	hypothetical protein	chr6	12358337	12359021	-	promoter
3	LOC_Os10g28050	chitinase 2, putative, expressed	gene	chitinase 2, putative, expressed	chr10	14487725	14489102	+	promoter
3	LOC_Os11g38270	hypothetical protein	gene	hypothetical protein	chr11	22197328	22198866	-	promoter
3	LOC_Os01g06500	PHLOEM 2-LIKE A5, putative, expressed	gene	PHLOEM 2-LIKE A5, putative, expressed	chr1	3057543	3058717	-	promoter
3	LOC_Os05g31010	hypothetical protein	gene	hypothetical protein	chr5	17955196	17955558	+	promoter
3	LOC_Os08g38580	harpin-induced protein 1 domain containing protein, expressed	gene	harpin-induced protein 1 domain containing protein, expressed	chr8	24386676	24387748	-	promoter
3	LOC_Os02g17710	receptor-like protein kinase 5 precursor, putative, expressed	gene	receptor-like protein kinase 5 precursor, putative, expressed	chr2	10213060	10216362	-	promoter
3	LOC_Os04g58220	transporter family protein, putative	gene	transporter family protein, putative	chr4	34484284	34486534	+	promoter
3	LOC_Os08g42380	mitochondrial import inner membrane translocase subunit Tim, putative, expressed	gene	mitochondrial import inner membrane translocase subunit Tim, putative, expressed	chr8	26747222	26748299	-	promoter,downstream
3	LOC_Os03g06080	heavy metal-associated domain containing protein, expressed	gene	heavy metal-associated domain containing protein, expressed	chr3	3045786	3046838	-	promoter,downstream
3	LOC_Os04g41390	expressed protein	gene	expressed protein	chr4	24360653	24361133	+	promoter
3	LOC_Os01g38980	calmodulin-binding protein, putative, expressed	gene	calmodulin-binding protein, putative, expressed	chr1	21899000	21902264	-	promoter
3	LOC_Os05g32860	expressed protein	gene	expressed protein	chr5	19178252	19178917	+	promoter
3	LOC_Os04g38850	expressed protein	gene	expressed protein	chr4	22909061	22910755	-	promoter
3	LOC_Os02g22080	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr2	13133206	13137031	-	promoter
3	LOC_Os05g51160	Myb transcription factor, putative, expressed	gene	Myb transcription factor, putative, expressed	chr5	29284551	29285986	-	promoter
3	LOC_Os01g65730	SET domain containing protein, expressed	gene	SET domain containing protein, expressed	chr1	38156276	38158742	-	promoter
3	LOC_Os12g44260	heat shock protein DnaJ, putative	gene	heat shock protein DnaJ, putative	chr12	27408160	27408829	-	promoter
3	LOC_Os03g56860	expressed protein	gene	expressed protein	chr3	32386399	32387336	-	promoter,downstream
3	LOC_Os01g71190	photosystem II reaction center PSB28 protein, chloroplast precursor, putative, expressed	gene	photosystem II reaction center PSB28 protein, chloroplast precursor, putative, expressed	chr1	41185931	41187796	+	promoter
3	LOC_Os01g15130	hydrolase, alpha/beta fold family domain containing protein, expressed	gene	hydrolase, alpha/beta fold family domain containing protein, expressed	chr1	8489582	8491348	+	promoter
3	LOC_Os04g30900	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr4	18287942	18291536	+	promoter
3	LOC_Os11g29800	hypothetical protein	gene	hypothetical protein	chr11	16829554	16829965	-	promoter
3	LOC_Os06g49150	exostosin, putative, expressed	gene	exostosin, putative, expressed	chr6	29785290	29787684	+	promoter
3	LOC_Os04g50740	ara54-like RING finger protein, putative, expressed	gene	ara54-like RING finger protein, putative, expressed	chr4	29831788	29835942	+	promoter
3	LOC_Os04g41480	skin secretory protein xP2 precursor, putative, expressed	gene	skin secretory protein xP2 precursor, putative, expressed	chr4	24404213	24404920	+	promoter
3	LOC_Os06g43170	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr6	25944638	25948548	-	promoter
3	LOC_Os07g46570	glutaredoxin, putative, expressed	gene	glutaredoxin, putative, expressed	chr7	27813115	27814227	-	promoter
3	LOC_Os07g28920	expressed protein	gene	expressed protein	chr7	16954698	16959444	-	promoter
3	LOC_Os04g43550	MazG nucleotide pyrophosphohydrolase domain containing protein, expressed	gene	MazG nucleotide pyrophosphohydrolase domain containing protein, expressed	chr4	25568562	25571439	+	promoter
3	LOC_Os07g10700	polygalacturonase, putative	gene	polygalacturonase, putative	chr7	5811198	5812918	-	promoter
3	LOC_Os08g04000	hypothetical protein	gene	hypothetical protein	chr8	1917391	1917665	+	promoter
3	LOC_Os06g03660	peroxisomal biogenesis factor 11, putative, expressed	gene	peroxisomal biogenesis factor 11, putative, expressed	chr6	1422798	1426679	+	promoter
3	LOC_Os08g25600	hypothetical protein	gene	hypothetical protein	chr8	15572960	15575770	+	promoter
3	LOC_Os10g06620	hypothetical protein	gene	hypothetical protein	chr10	3433243	3433497	-	promoter
3	LOC_Os05g08110	early light-induced protein, chloroplast precursor, putative, expressed	gene	early light-induced protein, chloroplast precursor, putative, expressed	chr5	4415759	4416698	-	promoter
3	LOC_Os05g03540	expressed protein	gene	expressed protein	chr5	1497840	1499630	-	promoter,downstream
3	LOC_Os04g40010	PPR repeat domain containing protein, putative	gene	PPR repeat domain containing protein, putative	chr4	23630270	23631907	-	promoter
3	LOC_Os11g10190	transposon protein, putative, Mariner sub-class	gene	transposon protein, putative, Mariner sub-class	chr11	5517578	5520591	-	promoter
3	LOC_Os02g40690	expressed protein	gene	expressed protein	chr2	24665326	24666085	+	promoter
3	LOC_Os01g74590	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr1	43192976	43193852	-	promoter
3	LOC_Os08g36460	hypothetical protein	gene	hypothetical protein	chr8	23002328	23002878	-	promoter
3	LOC_Os01g63960	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr1	37127378	37131727	+	promoter
3	LOC_Os09g23340	expressed protein	gene	expressed protein	chr9	13853698	13855180	+	promoter,downstream
3	LOC_Os11g24550	MBTB61 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed	gene	MBTB61 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed	chr11	13545141	13546696	+	promoter
3	LOC_Os12g40400	hypothetical protein	gene	hypothetical protein	chr12	24974169	24974745	+	promoter
3	LOC_Os03g07250	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr3	3700747	3703078	-	promoter
3	LOC_Os01g67980	cysteine proteinase EP-B 1 precursor, putative, expressed	gene	cysteine proteinase EP-B 1 precursor, putative, expressed	chr1	39500287	39501935	+	promoter
3	LOC_Os02g14990	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr2	8363274	8363903	-	promoter
3	LOC_Os05g37350	hhH-GPD superfamily base excision DNA repair protein	gene	hhH-GPD superfamily base excision DNA repair protein	chr5	21781212	21793886	-	promoter
3	LOC_Os09g23170	conserved hypothetical protein	gene	conserved hypothetical protein	chr9	13711161	13712159	-	promoter
3	LOC_Os12g42710	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr12	26503078	26505525	+	promoter
3	LOC_Os02g44134	thioesterase family protein, putative	gene	thioesterase family protein, putative	chr2	26696003	26700555	-	promoter
3	LOC_Os03g17550	serine/threonine-protein kinase, putative, expressed	gene	serine/threonine-protein kinase, putative, expressed	chr3	9750616	9754693	-	promoter
3	LOC_Os01g47780	fasciclin domain containing protein, expressed	gene	fasciclin domain containing protein, expressed	chr1	27339855	27340906	-	promoter
3	LOC_Os01g58330	hypothetical protein	gene	hypothetical protein	chr1	33703917	33705085	-	promoter
3	LOC_Os02g09190	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr2	4720932	4722709	-	promoter
3	LOC_Os07g36960	expressed protein	gene	expressed protein	chr7	22127509	22129410	+	promoter
3	LOC_Os06g01304	spotted leaf 11, putative, expressed	gene	spotted leaf 11, putative, expressed	chr6	184692	190452	+	promoter
3	LOC_Os01g37510	peptide deformylase, putative, expressed	gene	peptide deformylase, putative, expressed	chr1	20952913	20954470	-	promoter
3	LOC_Os04g56950	jasmonate O-methyltransferase, putative, expressed	gene	jasmonate O-methyltransferase, putative, expressed	chr4	33765117	33767459	-	promoter
3	LOC_Os10g37850	armadillo, putative, expressed	gene	armadillo, putative, expressed	chr10	20191790	20196114	+	promoter
3	LOC_Os01g69960	expressed protein	gene	expressed protein	chr1	40458958	40460440	+	promoter,downstream
3	LOC_Os02g39020	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr2	23564318	23566420	+	promoter
3	LOC_Os03g06930	homeodomain protein, putative, expressed	gene	homeodomain protein, putative, expressed	chr3	3512283	3516210	-	promoter
3	LOC_Os10g39870	ATG1, putative, expressed	gene	ATG1, putative, expressed	chr10	21259970	21261133	+	promoter,downstream
3	LOC_Os11g04230	transcription initiation factor, putative	gene	transcription initiation factor, putative	chr11	1737841	1740887	+	promoter
3	LOC_Os01g70440	LEML1 - Anther-specific LEM1 family protein precursor, expressed	gene	LEML1 - Anther-specific LEM1 family protein precursor, expressed	chr1	40796830	40797482	-	promoter
3	LOC_Os11g04900	glycoprotein X precursor, putative, expressed	gene	glycoprotein X precursor, putative, expressed	chr11	2083655	2085291	-	promoter
3	LOC_Os08g29510	conserved hypothetical protein	gene	conserved hypothetical protein	chr8	18090689	18093047	-	promoter
3	LOC_Os04g34430	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr4	20675317	20679645	-	promoter,downstream
3	LOC_Os06g12370	OsFtsH6  FtsH protease, homologue of AtFtsH6, expressed	gene	OsFtsH6  FtsH protease, homologue of AtFtsH6, expressed	chr6	6700248	6703417	-	promoter
3	LOC_Os05g01100	expressed protein	gene	expressed protein	chr5	95909	96914	-	promoter,downstream
3	LOC_Os02g06150	brassinosteroid LRR receptor kinase precursor, putative	gene	brassinosteroid LRR receptor kinase precursor, putative	chr2	3071796	3073432	-	promoter
3	LOC_Os02g57860	OsFBX71 - F-box domain containing protein	gene	OsFBX71 - F-box domain containing protein	chr2	35425163	35426971	-	promoter,downstream
3	LOC_Os01g24210	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr1	13642959	13645614	+	promoter
3	LOC_Os10g42880	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr10	23046593	23054560	-	promoter
3	LOC_Os01g01590	expressed protein	gene	expressed protein	chr1	292648	293536	+	promoter
3	LOC_Os01g56210	hypothetical protein	gene	hypothetical protein	chr1	32370938	32371825	-	promoter
3	LOC_Os05g04640	OsWRKY5 - Superfamily of TFs having WRKY and zinc finger domains, expressed	gene	OsWRKY5 - Superfamily of TFs having WRKY and zinc finger domains, expressed	chr5	2179495	2184915	-	promoter
3	LOC_Os01g54200	unknown	gene	unknown	chr1	31169485	31169669	-	promoter
3	LOC_Os07g36254	60S ribosomal protein L38, putative, expressed	gene	60S ribosomal protein L38, putative, expressed	chr7	21671608	21673176	-	promoter,downstream
3	LOC_Os04g47700	expressed protein	gene	expressed protein	chr4	28111260	28119886	-	promoter
3	LOC_Os08g42570	plant protein of unknown function domain containing protein, expressed	gene	plant protein of unknown function domain containing protein, expressed	chr8	26902273	26903897	+	promoter
3	LOC_Os01g66000	NADH dehydrogenase I subunit N, putative, expressed	gene	NADH dehydrogenase I subunit N, putative, expressed	chr1	38305113	38306686	-	promoter
3	LOC_Os02g02020	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr2	561823	564487	-	promoter
3	LOC_Os01g05610	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	gene	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	chr1	2673400	2674373	+	promoter
3	LOC_Os01g08880	conserved hypothetical protein	gene	conserved hypothetical protein	chr1	4453755	4456084	-	promoter
3	LOC_Os07g10510	hypothetical protein	gene	hypothetical protein	chr7	5658053	5658274	-	promoter
3	LOC_Os03g32100	spotted leaf 11, putative, expressed	gene	spotted leaf 11, putative, expressed	chr3	18365938	18367160	+	promoter
3	LOC_Os06g47220	expressed protein	gene	expressed protein	chr6	28628103	28628911	-	promoter
3	LOC_Os05g45910	conserved hypothetical protein	gene	conserved hypothetical protein	chr5	26542585	26544457	-	promoter
3	LOC_Os08g44540	expressed protein	gene	expressed protein	chr8	28006919	28008977	+	promoter,downstream
3	LOC_Os08g42780	hypothetical protein	gene	hypothetical protein	chr8	27067225	27067566	+	promoter
3	LOC_Os01g13180	expressed protein	gene	expressed protein	chr1	7344590	7345978	-	promoter
3	LOC_Os06g34700	hypothetical protein	gene	hypothetical protein	chr6	20165748	20167757	-	promoter
3	LOC_Os08g05860	hypothetical protein	gene	hypothetical protein	chr8	3150381	3150811	-	promoter
3	LOC_Os07g42390	DUF581 domain containing protein, expressed	gene	DUF581 domain containing protein, expressed	chr7	25362525	25364559	-	promoter
3	LOC_Os05g08519	unknown	gene	unknown	chr5	4647286	4647519	-	promoter
3	LOC_Os06g12060	mTERF family protein, expressed	gene	mTERF family protein, expressed	chr6	6460155	6464271	-	promoter,downstream
3	LOC_Os07g22670	mTERF domain containing protein, expressed	gene	mTERF domain containing protein, expressed	chr7	12771247	12773293	-	promoter
3	LOC_Os02g20200	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr2	11897097	11902222	-	promoter
3	LOC_Os02g48550	hypothetical protein	gene	hypothetical protein	chr2	29712310	29713694	-	promoter
3	LOC_Os06g42780	hypothetical protein	gene	hypothetical protein	chr6	25714154	25714941	+	promoter
3	LOC_Os02g52316	BTB/POZ domain containing protein, putative	gene	BTB/POZ domain containing protein, putative	chr2	32018492	32018881	+	promoter
3	LOC_Os07g39550	hypothetical protein	gene	hypothetical protein	chr7	23694189	23694545	+	promoter
3	LOC_Os04g53420	hypothetical protein	gene	hypothetical protein	chr4	31629865	31630320	-	promoter
3	LOC_Os01g08300	hypothetical protein	gene	hypothetical protein	chr1	4065623	4066218	-	promoter,downstream
3	LOC_Os10g39400	expressed protein	gene	expressed protein	chr10	20945050	20946824	-	promoter
3	LOC_Os10g27060	SET domain protein 123, putative, expressed	gene	SET domain protein 123, putative, expressed	chr10	14189932	14192641	-	promoter
3	LOC_Os01g29750	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr1	16663779	16670758	-	promoter
3	LOC_Os02g57940	OsFBX74 - F-box domain containing protein, expressed	gene	OsFBX74 - F-box domain containing protein, expressed	chr2	35475984	35478087	-	promoter
3	LOC_Os02g20500	hypothetical protein	gene	hypothetical protein	chr2	12089710	12091108	-	promoter
3	LOC_Os06g50830	bZIP transcription factor domain containing protein, expressed	gene	bZIP transcription factor domain containing protein, expressed	chr6	30753646	30757414	-	promoter
3	LOC_Os02g58510	GHMP kinases ATP-binding protein, putative	gene	GHMP kinases ATP-binding protein, putative	chr2	35766364	35767500	+	promoter,downstream
3	LOC_Os03g31160	expressed protein	gene	expressed protein	chr3	17740837	17742695	+	promoter,downstream
3	LOC_Os01g14800	hypothetical protein	gene	hypothetical protein	chr1	8272486	8272941	+	promoter
3	LOC_Os03g29184	expressed protein	gene	expressed protein	chr3	16585164	16585937	-	promoter
3	LOC_Os10g42550	Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed	gene	Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed	chr10	22871967	22873684	-	promoter
3	LOC_Os11g46220	hypothetical protein	gene	hypothetical protein	chr11	27518902	27519651	-	promoter
3	LOC_Os05g37140	2Fe-2S iron-sulfur cluster binding domain containing protein, expressed	gene	2Fe-2S iron-sulfur cluster binding domain containing protein, expressed	chr5	21643114	21644662	-	promoter,downstream
3	LOC_Os07g26760	hypothetical protein	gene	hypothetical protein	chr7	15458779	15459170	+	promoter
3	LOC_Os02g11950	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	6195010	6195441	+	promoter
3	LOC_Os01g42070	kinesin motor domain containing protein, putative, expressed	gene	kinesin motor domain containing protein, putative, expressed	chr1	23849821	23853440	-	promoter
3	LOC_Os01g04740	hypothetical protein	gene	hypothetical protein	chr1	2139865	2141091	-	promoter
3	LOC_Os04g34380	hypothetical protein	gene	hypothetical protein	chr4	20650126	20651636	+	promoter
3	LOC_Os02g53750	tyrosine protein kinase domain containing protein, putative, expressed	gene	tyrosine protein kinase domain containing protein, putative, expressed	chr2	32909439	32912645	-	promoter
3	LOC_Os02g38230	high affinity nitrate transporter, putative, expressed	gene	high affinity nitrate transporter, putative, expressed	chr2	23115264	23117280	-	promoter
3	LOC_Os06g42110	expressed protein	gene	expressed protein	chr6	25290551	25291059	+	promoter
3	LOC_Os02g15280	VQ domain containing protein, putative, expressed	gene	VQ domain containing protein, putative, expressed	chr2	8539272	8539739	-	promoter
3	LOC_Os06g06360	WRKY DNA-binding domain containing protein, expressed	gene	WRKY DNA-binding domain containing protein, expressed	chr6	2957992	2962007	+	promoter
3	LOC_Os01g62300	SLT1 protein, putative, expressed	gene	SLT1 protein, putative, expressed	chr1	36043077	36045559	-	promoter
3	LOC_Os01g10100	expressed protein	gene	expressed protein	chr1	5262422	5265102	-	promoter
3	LOC_Os12g05430	ribosomal protein L24, putative, expressed	gene	ribosomal protein L24, putative, expressed	chr12	2459538	2460360	-	promoter
3	LOC_Os07g10970	leucine zipper protein-like, putative, expressed	gene	leucine zipper protein-like, putative, expressed	chr7	6016655	6020153	-	promoter
3	LOC_Os02g04340	NIN-like protein 2, putative, expressed	gene	NIN-like protein 2, putative, expressed	chr2	1913425	1916183	-	promoter
3	LOC_Os12g10800	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr12	5807105	5815178	-	promoter
3	LOC_Os12g01590	expressed protein	gene	expressed protein	chr12	354523	358361	-	promoter
3	LOC_Os11g03740	pectinesterase inhibitor domain containing protein, expressed	gene	pectinesterase inhibitor domain containing protein, expressed	chr11	1467904	1468522	-	promoter
3	LOC_Os06g04000	peptidyl-prolyl cis-trans isomerase, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, putative, expressed	chr6	1634097	1635030	+	promoter,downstream
3	LOC_Os07g46770	expressed protein	gene	expressed protein	chr7	27947913	27949772	+	promoter,downstream
3	LOC_Os08g21554	hypothetical protein	gene	hypothetical protein	chr8	12836193	12838648	-	promoter
3	LOC_Os06g06620	hypothetical protein	gene	hypothetical protein	chr6	3114722	3115027	-	promoter
3	LOC_Os08g06070	ELF7, putative, expressed	gene	ELF7, putative, expressed	chr8	3311935	3317039	-	promoter
3	LOC_Os07g01740	cysteine protease, putative, expressed	gene	cysteine protease, putative, expressed	chr7	437202	438843	+	promoter,downstream
3	LOC_Os08g10560	histone-like transcription factor and archaeal histone family protein	gene	histone-like transcription factor and archaeal histone family protein	chr8	6211078	6217280	-	promoter
3	LOC_Os07g45790	expressed protein	gene	expressed protein	chr7	27333248	27335218	-	promoter
3	LOC_Os03g53180	hypothetical protein	gene	hypothetical protein	chr3	30500422	30500880	-	promoter
3	LOC_Os01g11600	conserved hypothetical protein	gene	conserved hypothetical protein	chr1	6256915	6257264	+	promoter
3	LOC_Os02g48560	fatty acid desaturase, putative, expressed	gene	fatty acid desaturase, putative, expressed	chr2	29719243	29724486	-	promoter
3	LOC_Os03g39660	hypothetical protein	gene	hypothetical protein	chr3	22055271	22056972	+	promoter
3	LOC_Os02g58310	expressed protein	gene	expressed protein	chr2	35670919	35672209	-	promoter,downstream
3	LOC_Os01g36100	hypothetical protein	gene	hypothetical protein	chr1	19976275	19978551	+	promoter
3	LOC_Os08g43810	carrier, putative	gene	carrier, putative	chr8	27653225	27653932	+	promoter
3	LOC_Os02g01760	diphosphomevalonate decarboxylase family protein	gene	diphosphomevalonate decarboxylase family protein	chr2	420812	424850	+	promoter
3	LOC_Os03g11810	expressed protein	gene	expressed protein	chr3	6178046	6178421	+	promoter,downstream
3	LOC_Os04g44050	expressed protein	gene	expressed protein	chr4	25912584	25913875	+	promoter
3	LOC_Os05g39240	ammonium transporter protein, putative, expressed	gene	ammonium transporter protein, putative, expressed	chr5	22946655	22950874	+	promoter
3	LOC_Os02g58800	expressed protein	gene	expressed protein	chr2	35923933	35924366	+	promoter
3	LOC_Os06g13180	metalloendoproteinase 1 precursor, putative, expressed	gene	metalloendoproteinase 1 precursor, putative, expressed	chr6	7223943	7225418	+	promoter
3	LOC_Os01g05630	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	gene	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	chr1	2685729	2686700	+	promoter,downstream
3	LOC_Os07g23260	hypothetical protein	gene	hypothetical protein	chr7	13103731	13104948	-	promoter
3	LOC_Os02g43530	hypothetical protein	gene	hypothetical protein	chr2	26261565	26261858	+	promoter
3	LOC_Os05g02799	unknown	gene	unknown	chr5	1008717	1008946	-	promoter
3	LOC_Os02g46390	hypothetical protein	gene	hypothetical protein	chr2	28264888	28265991	+	promoter
3	LOC_Os07g46100	hypothetical protein	gene	hypothetical protein	chr7	27514146	27515417	-	promoter
3	LOC_Os09g28780	hypothetical protein	gene	hypothetical protein	chr9	17480452	17480742	+	promoter
3	LOC_Os03g17060	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr3	9488358	9489802	-	promoter
3	LOC_Os10g02584	GAGA-binding protein, putative, expressed	gene	GAGA-binding protein, putative, expressed	chr10	975427	977514	-	promoter
3	LOC_Os02g40840	alcohol oxidase, putative, expressed	gene	alcohol oxidase, putative, expressed	chr2	24743573	24749050	-	promoter
3	LOC_Os08g08050	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr8	4565818	4568936	-	promoter
3	LOC_Os03g38745	serine/arginine repetitive matrix protein 1, putative, expressed	gene	serine/arginine repetitive matrix protein 1, putative, expressed	chr3	21518619	21520587	-	promoter
3	LOC_Os09g32280	thaumatin, putative	gene	thaumatin, putative	chr9	19268294	19270022	+	promoter
3	LOC_Os02g07900	ANTH/ENTH domain containing protein, putative, expressed	gene	ANTH/ENTH domain containing protein, putative, expressed	chr2	4135894	4140412	-	promoter
3	LOC_Os02g44940	RALFL8 - Rapid ALkalinization Factor RALF family protein precursor, expressed	gene	RALFL8 - Rapid ALkalinization Factor RALF family protein precursor, expressed	chr2	27222960	27223854	+	promoter
3	LOC_Os04g15560	protein kinase, putative	gene	protein kinase, putative	chr4	8458201	8459605	+	promoter
3	LOC_Os03g04760	expressed protein	gene	expressed protein	chr3	2267309	2270653	-	promoter
3	LOC_Os04g42880	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr4	25189500	25191691	+	promoter,downstream
3	LOC_Os06g11080	hypothetical protein	gene	hypothetical protein	chr6	5811592	5812001	+	promoter
3	LOC_Os06g08564	OsRCI2-8 - Putative low temperature and salt responsive protein, expressed	gene	OsRCI2-8 - Putative low temperature and salt responsive protein, expressed	chr6	4263425	4264116	-	promoter,downstream
3	LOC_Os03g18540	expressed protein	gene	expressed protein	chr3	10380274	10386518	+	promoter
3	LOC_Os04g19750	OsFBL11 - F-box domain and LRR containing protein, expressed	gene	OsFBL11 - F-box domain and LRR containing protein, expressed	chr4	11023888	11025568	-	promoter
3	LOC_Os02g56060	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr2	34306837	34312799	+	promoter
3	LOC_Os12g09010	hypothetical protein	gene	hypothetical protein	chr12	4711924	4712415	+	promoter
3	LOC_Os05g46320	OsFBX173 - F-box domain containing protein, expressed	gene	OsFBX173 - F-box domain containing protein, expressed	chr5	26783440	26785343	-	promoter
3	LOC_Os03g11390	hypothetical protein	gene	hypothetical protein	chr3	5863057	5863700	+	promoter
3	LOC_Os05g05250	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr5	2574192	2574749	-	promoter
3	LOC_Os07g40240	GASR9 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed	gene	GASR9 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed	chr7	24124339	24126493	+	promoter
3	LOC_Os08g16670	OsFBX280 - F-box domain containing protein, expressed	gene	OsFBX280 - F-box domain containing protein, expressed	chr8	10197428	10200762	-	promoter
3	LOC_Os02g50110	hypothetical protein	gene	hypothetical protein	chr2	30590789	30591031	-	promoter
3	LOC_Os02g54060	chaperonin, putative, expressed	gene	chaperonin, putative, expressed	chr2	33108911	33111434	-	promoter
3	LOC_Os01g24440	glycine-rich protein, putative, expressed	gene	glycine-rich protein, putative, expressed	chr1	13777546	13778760	-	promoter
3	LOC_Os02g04530	rust resistance-like protein RP1, putative	gene	rust resistance-like protein RP1, putative	chr2	2011707	2018122	+	promoter
3	LOC_Os11g02100	peroxidase precursor, putative, expressed	gene	peroxidase precursor, putative, expressed	chr11	570322	572075	+	promoter
3	LOC_Os12g42530	conserved hypothetical protein	gene	conserved hypothetical protein	chr12	26387110	26388414	+	promoter
3	LOC_Os07g08129	unknown	gene	unknown	chr7	4123826	4124350	+	promoter
3	LOC_Os07g47510	stress-related protein, putative, expressed	gene	stress-related protein, putative, expressed	chr7	28409548	28412163	+	promoter
3	LOC_Os01g66310	expressed protein	gene	expressed protein	chr1	38515374	38515794	+	promoter,downstream
3	LOC_Os08g43240	LTPL97 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	gene	LTPL97 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	chr8	27330142	27330915	-	promoter
3	LOC_Os03g23940	hypothetical protein	gene	hypothetical protein	chr3	13583963	13584921	+	promoter,downstream
3	LOC_Os02g39884	expressed protein	gene	expressed protein	chr2	24092282	24094013	-	promoter,downstream
3	LOC_Os01g23730	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr1	13347542	13348345	+	promoter
3	LOC_Os04g09360	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr4	4971625	4980154	+	promoter
3	LOC_Os09g23725	expressed protein	gene	expressed protein	chr9	14101038	14102803	-	promoter,downstream
3	LOC_Os07g22460	hypothetical protein	gene	hypothetical protein	chr7	12627799	12628386	+	promoter
3	LOC_Os03g57200	glutathione S-transferase, putative, expressed	gene	glutathione S-transferase, putative, expressed	chr3	32612053	32613160	-	promoter
3	LOC_Os01g43490	polygalacturonase, putative, expressed	gene	polygalacturonase, putative, expressed	chr1	24898121	24900769	-	promoter
3	LOC_Os01g62230	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	gene	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	chr1	36012789	36013654	-	promoter,downstream
3	LOC_Os03g18950	zinc finger C-x8-C-x5-C-x3-H type family protein	gene	zinc finger C-x8-C-x5-C-x3-H type family protein	chr3	10612451	10614499	+	promoter
3	LOC_Os01g51180	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr1	29415233	29422179	+	promoter
3	LOC_Os10g34720	LOI1, putative, expressed	gene	LOI1, putative, expressed	chr10	18469116	18471351	+	promoter
3	LOC_Os08g13330	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr8	7919981	7923535	-	promoter
3	LOC_Os02g38960	hypothetical protein	gene	hypothetical protein	chr2	23535136	23535920	-	promoter
3	LOC_Os12g43840	ankyrin repeat domain-containing protein, putative, expressed	gene	ankyrin repeat domain-containing protein, putative, expressed	chr12	27179778	27185459	-	promoter
3	LOC_Os08g06500	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr8	3679928	3687731	+	promoter
3	LOC_Os04g41140	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr4	24214023	24217322	-	promoter,downstream
3	LOC_Os10g02650	PPR repeat containing protein	gene	PPR repeat containing protein	chr10	1032908	1036571	-	promoter
3	LOC_Os06g12640	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr6	6894778	6900080	+	promoter
3	LOC_Os01g08600	expressed protein	gene	expressed protein	chr1	4280714	4282625	-	promoter
3	LOC_Os12g26220	expressed protein	gene	expressed protein	chr12	15281673	15282292	-	promoter
3	LOC_Os02g36530	hypothetical protein	gene	hypothetical protein	chr2	22059360	22059626	-	promoter
3	LOC_Os12g38320	expressed protein	gene	expressed protein	chr12	23486428	23487741	-	promoter
3	LOC_Os03g01980	KIP1, putative, expressed	gene	KIP1, putative, expressed	chr3	608879	613454	+	promoter
3	LOC_Os11g05935	mucin, putative	gene	mucin, putative	chr11	2790062	2790646	+	promoter
3	LOC_Os04g52980	expressed protein	gene	expressed protein	chr4	31374700	31374969	+	promoter
3	LOC_Os03g51470	expressed protein	gene	expressed protein	chr3	29444136	29446665	-	promoter
3	LOC_Os05g38500	fasciclin-like arabinogalactan protein, putative, expressed	gene	fasciclin-like arabinogalactan protein, putative, expressed	chr5	22524615	22526317	+	promoter
3	LOC_Os01g66610	serine/threonine-protein kinase receptor precursor, putative, expressed	gene	serine/threonine-protein kinase receptor precursor, putative, expressed	chr1	38687167	38691578	-	promoter
3	LOC_Os01g06910	hypothetical protein	gene	hypothetical protein	chr1	3276305	3276805	-	promoter
3	LOC_Os12g10859	unknown	gene	unknown	chr12	5852972	5853344	+	promoter
3	LOC_Os07g27370	resistance protein, putative, expressed	gene	resistance protein, putative, expressed	chr7	15927652	15930497	-	promoter
3	LOC_Os08g02080	rickettsia 17 kDa surface antigen family protein, expressed	gene	rickettsia 17 kDa surface antigen family protein, expressed	chr8	681563	683136	-	promoter
3	LOC_Os03g04260	glutathione S-transferase, putative, expressed	gene	glutathione S-transferase, putative, expressed	chr3	1953665	1954965	-	promoter,downstream
3	LOC_Os03g11734	MATE efflux protein, putative, expressed	gene	MATE efflux protein, putative, expressed	chr3	6130845	6141785	-	promoter
3	LOC_Os07g39440	zinc finger family protein, putative	gene	zinc finger family protein, putative	chr7	23623371	23626955	-	promoter
3	LOC_Os07g37280	hypothetical protein	gene	hypothetical protein	chr7	22339097	22340408	+	promoter
3	LOC_Os03g04010	hypothetical protein	gene	hypothetical protein	chr3	1826219	1826613	-	promoter
3	LOC_Os07g27159	unknown	gene	unknown	chr7	15755553	15755783	+	promoter
3	LOC_Os11g05550	expressed protein	gene	expressed protein	chr11	2502845	2504306	+	promoter
3	LOC_Os06g32520	hypothetical protein	gene	hypothetical protein	chr6	18915542	18915904	-	promoter
3	LOC_Os11g11900	hypothetical protein	gene	hypothetical protein	chr11	6600104	6601475	-	promoter
3	LOC_Os11g03400	ribosomal protein, putative, expressed	gene	ribosomal protein, putative, expressed	chr11	1284393	1285292	-	promoter,downstream
3	LOC_Os01g50480	SAM dependent carboxyl methyltransferase, putative	gene	SAM dependent carboxyl methyltransferase, putative	chr1	28983498	28984971	-	promoter
3	LOC_Os09g28230	gibberellin receptor GID1L2, putative, expressed	gene	gibberellin receptor GID1L2, putative, expressed	chr9	17144733	17146123	-	promoter
3	LOC_Os08g32710	hypothetical protein	gene	hypothetical protein	chr8	20258061	20258382	-	promoter
3	LOC_Os12g38010	metallothionein, putative, expressed	gene	metallothionein, putative, expressed	chr12	23318651	23319649	-	promoter
3	LOC_Os07g48170	nucleotidyltransferase, putative, expressed	gene	nucleotidyltransferase, putative, expressed	chr7	28769343	28775333	-	promoter
3	LOC_Os07g26750	expressed protein	gene	expressed protein	chr7	15450957	15451511	-	promoter,downstream
3	LOC_Os08g23790	polygalacturonase, putative, expressed	gene	polygalacturonase, putative, expressed	chr8	14401450	14403992	-	promoter
3	LOC_Os04g53170	bromodomain containing protein, expressed	gene	bromodomain containing protein, expressed	chr4	31478155	31480304	-	promoter
3	LOC_Os08g15170	ATP synthase epsilon chain, mitochondrial, putative, expressed	gene	ATP synthase epsilon chain, mitochondrial, putative, expressed	chr8	9178592	9179389	-	promoter
3	LOC_Os03g53710	aldose 1-epimerase, putative, expressed	gene	aldose 1-epimerase, putative, expressed	chr3	30789370	30791162	-	promoter
3	LOC_Os04g43450	hypothetical protein	gene	hypothetical protein	chr4	25528413	25529792	-	promoter
3	LOC_Os11g31590	armadillo, putative, expressed	gene	armadillo, putative, expressed	chr11	17998079	17999506	-	promoter
3	LOC_Os03g06200	aminotransferase, putative, expressed	gene	aminotransferase, putative, expressed	chr3	3109720	3111539	+	promoter
3	LOC_Os01g03670	dihydroflavonol-4-reductase, putative, expressed	gene	dihydroflavonol-4-reductase, putative, expressed	chr1	1512136	1513467	+	promoter
3	LOC_Os04g03820	hypothetical protein	gene	hypothetical protein	chr4	1716630	1717255	+	promoter
3	LOC_Os01g28000	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr1	15649279	15660314	+	promoter
3	LOC_Os08g06210	expressed protein	gene	expressed protein	chr8	3424739	3427077	+	promoter
3	LOC_Os04g40960	OsFBX147 - F-box domain containing protein	gene	OsFBX147 - F-box domain containing protein	chr4	24124441	24125010	-	promoter
3	LOC_Os03g09230	LTPL69 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	gene	LTPL69 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	chr3	4819682	4821725	-	promoter
3	LOC_Os05g43660	expressed protein	gene	expressed protein	chr5	25324484	25325389	-	promoter
3	LOC_Os09g01930	hypothetical protein	gene	hypothetical protein	chr9	622743	623452	+	promoter
3	LOC_Os04g31750	hypothetical protein	gene	hypothetical protein	chr4	18831683	18832505	-	promoter
3	LOC_Os02g37600	expressed protein	gene	expressed protein	chr2	22686696	22688217	+	promoter
3	LOC_Os01g27760	conserved hypothetical protein	gene	conserved hypothetical protein	chr1	15493863	15495254	+	promoter
3	LOC_Os06g49490	ZOS6-10 - C2H2 zinc finger protein, expressed	gene	ZOS6-10 - C2H2 zinc finger protein, expressed	chr6	29975870	29976670	+	promoter,downstream
3	LOC_Os02g48670	slowmo homolog, putative, expressed	gene	slowmo homolog, putative, expressed	chr2	29793582	29794710	-	promoter
3	LOC_Os05g01370	polygalacturonase inhibitor precursor, putative, expressed	gene	polygalacturonase inhibitor precursor, putative, expressed	chr5	227008	228036	+	promoter
3	LOC_Os01g48260	hypothetical protein	gene	hypothetical protein	chr1	27657814	27658083	-	promoter,downstream
3	LOC_Os03g05120	hypothetical protein	gene	hypothetical protein	chr3	2490949	2491961	+	promoter
3	LOC_Os02g01340	ferredoxin--NADP reductase, chloroplast precursor, putative, expressed	gene	ferredoxin--NADP reductase, chloroplast precursor, putative, expressed	chr2	183601	185327	-	promoter
3	LOC_Os01g17396	expressed protein	gene	expressed protein	chr1	10007012	10010571	-	promoter
3	LOC_Os09g30390	conserved hypothetical protein	gene	conserved hypothetical protein	chr9	18494825	18495403	+	promoter,downstream
3	LOC_Os08g03400	expressed protein	gene	expressed protein	chr8	1588183	1589209	-	promoter
3	LOC_Os05g07740	receptor-like protein kinase 2 precursor, putative, expressed	gene	receptor-like protein kinase 2 precursor, putative, expressed	chr5	4172691	4176785	+	promoter
3	LOC_Os06g15710	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr6	8903525	8903881	-	promoter
3	LOC_Os12g03980	conserved hypothetical protein	gene	conserved hypothetical protein	chr12	1650422	1651037	-	promoter,downstream
3	LOC_Os06g01180	expressed protein	gene	expressed protein	chr6	137492	138803	+	promoter
3	LOC_Os10g26150	expressed protein	gene	expressed protein	chr10	13481831	13482073	-	promoter
3	LOC_Os04g56780	homeobox domain containing protein, expressed	gene	homeobox domain containing protein, expressed	chr4	33675265	33676315	-	promoter
3	LOC_Os01g04500	expressed protein	gene	expressed protein	chr1	2002219	2002916	-	promoter
3	LOC_Os05g25880	N-dimethylguanosine tRNA methyltransferase, putative, expressed	gene	N-dimethylguanosine tRNA methyltransferase, putative, expressed	chr5	14999958	15000795	-	promoter
3	LOC_Os05g27510	hypothetical protein	gene	hypothetical protein	chr5	15944273	15945236	+	promoter
3	LOC_Os05g45520	conserved hypothetical protein	gene	conserved hypothetical protein	chr5	26326633	26328637	-	promoter
3	LOC_Os10g37440	hypothetical protein	gene	hypothetical protein	chr10	19966306	19966632	-	promoter
3	LOC_Os01g48820	expressed protein	gene	expressed protein	chr1	28011349	28012962	+	promoter
3	LOC_Os01g54600	OsWRKY13 - Superfamily of TFs having WRKY and zinc finger domains, expressed	gene	OsWRKY13 - Superfamily of TFs having WRKY and zinc finger domains, expressed	chr1	31407960	31409934	-	promoter
3	LOC_Os03g48960	conserved hypothetical protein	gene	conserved hypothetical protein	chr3	27876470	27876832	-	promoter
3	LOC_Os01g27480	glutathione S-transferase, putative, expressed	gene	glutathione S-transferase, putative, expressed	chr1	15343354	15344383	+	promoter
3	LOC_Os01g61680	expressed protein	gene	expressed protein	chr1	35685366	35686755	+	promoter,downstream
3	LOC_Os02g52350	hypothetical protein	gene	hypothetical protein	chr2	32040339	32041341	-	promoter
3	LOC_Os02g56140	helix-loop-helix DNA-binding domain containing protein, expressed	gene	helix-loop-helix DNA-binding domain containing protein, expressed	chr2	34347861	34350918	-	promoter
3	LOC_Os05g33930	hypothetical protein	gene	hypothetical protein	chr5	19969427	19969726	-	promoter
3	LOC_Os06g39240	endothelial differentiation-related factor 1, putative, expressed	gene	endothelial differentiation-related factor 1, putative, expressed	chr6	23292237	23293081	-	promoter
3	LOC_Os12g05930	conserved hypothetical protein	gene	conserved hypothetical protein	chr12	2731573	2732169	-	promoter
3	LOC_Os01g70310	inducer of CBF expression 2, putative, expressed	gene	inducer of CBF expression 2, putative, expressed	chr1	40713102	40716136	-	promoter
3	LOC_Os07g42885	retrotransposon protein, putative, Ty1-copia subclass, expressed	gene	retrotransposon protein, putative, Ty1-copia subclass, expressed	chr7	25674084	25675751	-	promoter
3	LOC_Os03g02210	expressed protein	gene	expressed protein	chr3	739379	742150	+	promoter
3	LOC_Os04g54960	expressed protein	gene	expressed protein	chr4	32504933	32507542	-	promoter
3	LOC_Os01g72260	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr1	41895461	41897288	-	promoter
3	LOC_Os03g38650	hypothetical protein	gene	hypothetical protein	chr3	21458574	21460081	-	promoter
3	LOC_Os06g05200	zinc finger, C3HC4 type domain containing protein	gene	zinc finger, C3HC4 type domain containing protein	chr6	2334681	2335298	-	promoter
3	LOC_Os02g52934	hypothetical protein	gene	hypothetical protein	chr2	32365544	32367703	-	promoter
3	LOC_Os01g52150	hypothetical protein	gene	hypothetical protein	chr1	29999675	30000330	-	promoter
3	LOC_Os07g12590	OsFBX225 - F-box domain containing protein, expressed	gene	OsFBX225 - F-box domain containing protein, expressed	chr7	7183005	7185982	-	promoter
3	LOC_Os11g17090	hypothetical protein	gene	hypothetical protein	chr11	9474265	9476125	-	promoter
3	LOC_Os03g23920	hypothetical protein	gene	hypothetical protein	chr3	13574524	13575951	-	promoter
3	LOC_Os02g17400	leucine rich repeat protein, putative	gene	leucine rich repeat protein, putative	chr2	10010586	10013468	-	promoter
3	LOC_Os03g09880	AIR12, putative, expressed	gene	AIR12, putative, expressed	chr3	4912124	4913147	+	promoter
3	LOC_Os10g22110	conserved hypothetical protein	gene	conserved hypothetical protein	chr10	11347531	11350140	-	promoter
3	LOC_Os02g48300	OsFBX60 - F-box domain containing protein	gene	OsFBX60 - F-box domain containing protein	chr2	29549773	29551847	-	promoter
3	LOC_Os05g45954	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr5	26569248	26571116	-	promoter,downstream
3	LOC_Os10g42650	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr10	22925653	22927605	-	promoter
3	LOC_Os08g17655	expressed protein	gene	expressed protein	chr8	10803297	10804311	+	promoter
3	LOC_Os03g63760	glycosyl hydrolases family 16, putative, expressed	gene	glycosyl hydrolases family 16, putative, expressed	chr3	35987230	35988788	-	promoter
3	LOC_Os01g64570	U-box domain-containing protein, putative, expressed	gene	U-box domain-containing protein, putative, expressed	chr1	37463227	37464441	-	promoter
3	LOC_Os03g58350	OsIAA14 - Auxin-responsive Aux/IAA gene family member, expressed	gene	OsIAA14 - Auxin-responsive Aux/IAA gene family member, expressed	chr3	33238881	33240188	-	promoter
3	LOC_Os01g50310	VIP1 protein, putative, expressed	gene	VIP1 protein, putative, expressed	chr1	28880348	28881909	-	promoter
3	LOC_Os01g63160	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr1	36605492	36607092	-	promoter
3	LOC_Os06g40110	RNA polymerase Rpc34 subunit family protein, expressed	gene	RNA polymerase Rpc34 subunit family protein, expressed	chr6	23872481	23873728	-	promoter,downstream
3	LOC_Os11g19260	conserved hypothetical protein	gene	conserved hypothetical protein	chr11	11019128	11019471	+	promoter
3	LOC_Os08g35490	ctr copper transporter family protein, putative	gene	ctr copper transporter family protein, putative	chr8	22359625	22360155	+	promoter
3	LOC_Os02g24340	1-acyl-sn-glycerol-3-phosphate acyltransferase theta, putative	gene	1-acyl-sn-glycerol-3-phosphate acyltransferase theta, putative	chr2	14115233	14118040	-	promoter,downstream
3	LOC_Os05g18960	conserved hypothetical protein	gene	conserved hypothetical protein	chr5	11002669	11003268	+	promoter
3	LOC_Os08g43050	disease resistance protein RGA2, putative, expressed	gene	disease resistance protein RGA2, putative, expressed	chr8	27203155	27207237	-	promoter,downstream
3	LOC_Os10g27350	DUF584 domain containing protein, putative	gene	DUF584 domain containing protein, putative	chr10	14363217	14363975	-	promoter
3	LOC_Os07g22960	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr7	12930686	12949090	-	promoter
3	LOC_Os03g46320	hypothetical protein	gene	hypothetical protein	chr3	26195940	26198436	+	promoter
3	LOC_Os03g02120	transposon protein, putative, Mariner sub-class	gene	transposon protein, putative, Mariner sub-class	chr3	681778	685712	-	promoter
3	LOC_Os04g01600	erythronate-4-phosphate dehydrogenase domain containing protein, expressed	gene	erythronate-4-phosphate dehydrogenase domain containing protein, expressed	chr4	399955	404335	+	promoter
3	LOC_Os01g32670	expressed protein	gene	expressed protein	chr1	17910477	17911104	-	promoter
3	LOC_Os02g05360	expressed protein	gene	expressed protein	chr2	2575640	2577067	-	promoter
3	LOC_Os07g38230	expressed protein	gene	expressed protein	chr7	22924575	22926061	-	promoter
3	LOC_Os03g58204	ribosomal protein L4, putative, expressed	gene	ribosomal protein L4, putative, expressed	chr3	33136467	33138922	-	promoter
3	LOC_Os10g30290	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr10	15662852	15665678	-	promoter
3	LOC_Os03g18350	importin subunit beta, putative, expressed	gene	importin subunit beta, putative, expressed	chr3	10278657	10281935	-	promoter
3	LOC_Os02g01080	expressed protein	gene	expressed protein	chr2	42230	43816	-	promoter
3	LOC_Os05g03590	expressed protein	gene	expressed protein	chr5	1521669	1522912	-	promoter
3	LOC_Os08g33650	SET domain-containing protein, putative, expressed	gene	SET domain-containing protein, putative, expressed	chr8	21011745	21016019	+	promoter
3	LOC_Os05g01210	expressed protein	gene	expressed protein	chr5	149946	152046	-	promoter
3	LOC_Os09g35010	dehydration-responsive element-binding protein, putative, expressed	gene	dehydration-responsive element-binding protein, putative, expressed	chr9	20394743	20395724	-	promoter
3	LOC_Os04g51140	E2F-related protein, putative, expressed	gene	E2F-related protein, putative, expressed	chr4	30099840	30101088	-	promoter
3	LOC_Os03g28310	dnaJ domain containing protein, expressed	gene	dnaJ domain containing protein, expressed	chr3	16292292	16295771	-	promoter
3	LOC_Os03g60470	glycine-rich protein A3, putative, expressed	gene	glycine-rich protein A3, putative, expressed	chr3	34375585	34377231	+	promoter
3	LOC_Os06g48980	protein kinase APK1B, chloroplast precursor, putative, expressed	gene	protein kinase APK1B, chloroplast precursor, putative, expressed	chr6	29674092	29677083	-	promoter,downstream
3	LOC_Os12g12115	expressed protein	gene	expressed protein	chr12	6642381	6642929	-	promoter
3	LOC_Os01g45070	peptide deformylase, putative, expressed	gene	peptide deformylase, putative, expressed	chr1	25584707	25588118	-	promoter
3	LOC_Os02g34540	tetratricopeptide repeat containing protein, putative, expressed	gene	tetratricopeptide repeat containing protein, putative, expressed	chr2	20697654	20699095	-	promoter
3	LOC_Os05g32150	expressed protein	gene	expressed protein	chr5	18680335	18681042	-	promoter
3	LOC_Os01g50980	cullin, putative	gene	cullin, putative	chr1	29289281	29294397	+	promoter
3	LOC_Os03g56878	unknown	gene	unknown	chr3	32391503	32392610	-	promoter,downstream
3	LOC_Os08g40080	expressed protein	gene	expressed protein	chr8	25371916	25372603	-	promoter
3	LOC_Os02g07890	60S ribosomal protein L27a-3, putative, expressed	gene	60S ribosomal protein L27a-3, putative, expressed	chr2	4134900	4135669	+	promoter
3	LOC_Os07g04540	hypothetical protein	gene	hypothetical protein	chr7	2005606	2006391	-	promoter
3	LOC_Os10g36500	invertase/pectin methylesterase inhibitor family protein, putative, expressed	gene	invertase/pectin methylesterase inhibitor family protein, putative, expressed	chr10	19458641	19460805	-	promoter
3	LOC_Os12g07710	expressed protein	gene	expressed protein	chr12	3869943	3870558	-	promoter
3	LOC_Os02g17920	glyoxalase family protein, putative, expressed	gene	glyoxalase family protein, putative, expressed	chr2	10378453	10380937	-	promoter
3	LOC_Os01g33009	unknown	gene	unknown	chr1	18129546	18130053	-	promoter,downstream
3	LOC_Os01g13740	myb-like DNA-binding domain containing protein, expressed	gene	myb-like DNA-binding domain containing protein, expressed	chr1	7685884	7692987	-	promoter
3	LOC_Os12g40020	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr12	24713720	24714865	+	promoter
3	LOC_Os03g14130	POEI1 - Pollen Ole e I allergen and extensin family protein precursor, expressed	gene	POEI1 - Pollen Ole e I allergen and extensin family protein precursor, expressed	chr3	7674681	7676063	-	promoter
3	LOC_Os12g05609	OsFBO24 - F-box and other domain containing protein	gene	OsFBO24 - F-box and other domain containing protein	chr12	2573327	2574586	-	promoter
3	LOC_Os05g06480	inorganic H+ pyrophosphatase, putative, expressed	gene	inorganic H+ pyrophosphatase, putative, expressed	chr5	3335223	3339792	-	promoter
3	LOC_Os08g42277	OsSAUR35 - Auxin-responsive SAUR gene family member	gene	OsSAUR35 - Auxin-responsive SAUR gene family member	chr8	26691824	26692445	-	promoter
3	LOC_Os07g05390	expressed protein	gene	expressed protein	chr7	2467569	2472958	-	promoter
3	LOC_Os04g33885	expressed protein	gene	expressed protein	chr4	20356829	20358364	-	promoter
3	LOC_Os04g46790	hypothetical protein	gene	hypothetical protein	chr4	27551344	27552015	-	promoter
3	LOC_Os07g43820	glycosyl hydrolase, putative, expressed	gene	glycosyl hydrolase, putative, expressed	chr7	26214101	26215264	+	promoter
3	LOC_Os03g17174	PsbP, putative, expressed	gene	PsbP, putative, expressed	chr3	9554460	9556371	+	promoter,downstream
3	LOC_Os03g51150	expressed protein	gene	expressed protein	chr3	29265360	29267679	-	promoter,downstream
3	LOC_Os10g24954	ulp1 protease family, C-terminal catalytic domain containing protein	gene	ulp1 protease family, C-terminal catalytic domain containing protein	chr10	12773800	12782694	+	promoter
3	LOC_Os10g33240	expressed protein	gene	expressed protein	chr10	17366247	17369796	+	promoter
3	LOC_Os09g12720	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr9	7276192	7281393	-	promoter
3	LOC_Os02g50940	NHL repeat-containing protein, putative, expressed	gene	NHL repeat-containing protein, putative, expressed	chr2	31139333	31140270	-	promoter
3	LOC_Os07g46230	expressed protein	gene	expressed protein	chr7	27584054	27586368	+	promoter
3	LOC_Os01g11990	expressed protein	gene	expressed protein	chr1	6527797	6530845	+	promoter,downstream
3	LOC_Os07g40760	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr7	24421751	24427483	+	promoter,downstream
3	LOC_Os12g03390	OsFBX435 - F-box domain containing protein, expressed	gene	OsFBX435 - F-box domain containing protein, expressed	chr12	1314753	1316248	-	promoter,downstream
3	LOC_Os02g10410	hypothetical protein	gene	hypothetical protein	chr2	5475698	5475958	-	promoter
3	LOC_Os12g04230	expressed protein	gene	expressed protein	chr12	1789081	1790190	-	promoter
3	LOC_Os07g31500	leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed	gene	leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed	chr7	18687121	18691312	-	promoter
3	LOC_Os07g47790	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr7	28539705	28540804	-	promoter
3	LOC_Os02g38710	protein phosphatase 2C containing protein, expressed	gene	protein phosphatase 2C containing protein, expressed	chr2	23392528	23398849	+	promoter
3	LOC_Os01g53730	expressed protein	gene	expressed protein	chr1	30883777	30885296	-	promoter
3	LOC_Os04g42451	expressed protein	gene	expressed protein	chr4	24935910	24937554	-	promoter
3	LOC_Os03g40560	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr3	22553439	22558263	+	promoter
3	LOC_Os03g62590	oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed	gene	oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed	chr3	35421457	35423356	-	promoter,downstream
3	LOC_Os09g36360	protein of unknown function containing protein, expressed	gene	protein of unknown function containing protein, expressed	chr9	20983248	20985898	-	promoter
3	LOC_Os02g43940	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr2	26518704	26520150	+	promoter
3	LOC_Os02g55720	cyclin, N-terminal domain containing protein	gene	cyclin, N-terminal domain containing protein	chr2	34112593	34119961	-	promoter
3	LOC_Os02g03380	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr2	1369986	1374150	+	promoter
3	LOC_Os06g07878	peptidase, T1 family, putative, expressed	gene	peptidase, T1 family, putative, expressed	chr6	3831013	3832596	+	promoter,downstream
3	LOC_Os11g09470	hypothetical protein	gene	hypothetical protein	chr11	5072148	5072703	-	promoter
3	LOC_Os03g43480	AGG2, putative	gene	AGG2, putative	chr3	24254076	24254930	-	promoter
3	LOC_Os12g02160	hypothetical protein	gene	hypothetical protein	chr12	657672	658919	-	promoter
3	LOC_Os04g44450	hypothetical protein	gene	hypothetical protein	chr4	26132375	26133883	+	promoter
3	LOC_Os03g17220	dirigent, putative, expressed	gene	dirigent, putative, expressed	chr3	9598301	9600045	+	promoter,downstream
3	LOC_Os07g47470	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr7	28372376	28374031	-	promoter
3	LOC_Os01g58320	expressed protein	gene	expressed protein	chr1	33702358	33702816	+	promoter
3	LOC_Os08g06474	ribosomal protein L13, putative	gene	ribosomal protein L13, putative	chr8	3635270	3637029	+	promoter
3	LOC_Os07g45170	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr7	26964238	26966056	-	promoter
3	LOC_Os03g62770	hypothetical protein	gene	hypothetical protein	chr3	35511963	35512847	-	promoter,downstream
3	LOC_Os06g04980	OsFBX185 - F-box domain containing protein	gene	OsFBX185 - F-box domain containing protein	chr6	2194354	2197374	+	promoter
3	LOC_Os01g53160	DUF623 domain containing protein, expressed	gene	DUF623 domain containing protein, expressed	chr1	30541756	30543146	+	promoter
3	LOC_Os04g41560	B-box zinc finger family protein, putative, expressed	gene	B-box zinc finger family protein, putative, expressed	chr4	24462763	24464258	-	promoter
3	LOC_Os04g47555	expressed protein	gene	expressed protein	chr4	28016211	28017265	-	promoter
3	LOC_Os09g07614	expressed protein	gene	expressed protein	chr9	3825022	3826027	-	promoter
3	LOC_Os02g09750	lycopene beta cyclase, chloroplast precursor, putative, expressed	gene	lycopene beta cyclase, chloroplast precursor, putative, expressed	chr2	5028559	5030417	-	promoter
3	LOC_Os10g41470	60S ribosomal protein L27-3, putative, expressed	gene	60S ribosomal protein L27-3, putative, expressed	chr10	22216889	22217862	-	promoter
3	LOC_Os12g31660	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr12	19041187	19043885	-	promoter
3	LOC_Os03g05350	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr3	2618660	2623045	+	promoter
3	LOC_Os02g53280	expressed protein	gene	expressed protein	chr2	32605828	32608480	-	promoter
3	LOC_Os06g46500	monocopper oxidase, putative, expressed	gene	monocopper oxidase, putative, expressed	chr6	28233423	28237463	-	promoter
3	LOC_Os04g12840	resistance protein, putative, expressed	gene	resistance protein, putative, expressed	chr4	7085498	7088035	+	promoter
3	LOC_Os12g22780	hypothetical protein	gene	hypothetical protein	chr12	12850448	12851431	-	promoter
3	LOC_Os07g34620	expressed protein	gene	expressed protein	chr7	20751222	20753518	-	promoter
3	LOC_Os07g23354	transposon protein, putative, CACTA, En/Spm sub-class	gene	transposon protein, putative, CACTA, En/Spm sub-class	chr7	13152655	13167039	+	promoter
3	LOC_Os11g45850	OsWRKY81 - Superfamily of TFs having WRKY and zinc finger domains, expressed	gene	OsWRKY81 - Superfamily of TFs having WRKY and zinc finger domains, expressed	chr11	27268528	27269761	+	promoter
3	LOC_Os02g53390	hypothetical protein	gene	hypothetical protein	chr2	32675760	32676080	+	promoter
3	LOC_Os01g20894	expressed protein	gene	expressed protein	chr1	11666234	11666690	-	promoter
3	LOC_Os02g55500	expressed protein	gene	expressed protein	chr2	33977060	33977762	-	promoter
3	LOC_Os11g03690	expressed protein	gene	expressed protein	chr11	1434830	1436760	+	promoter
3	LOC_Os09g16720	hypothetical protein	gene	hypothetical protein	chr9	10228039	10228354	-	promoter
3	LOC_Os07g43440	expressed protein	gene	expressed protein	chr7	26007924	26009337	-	promoter
3	LOC_Os06g10355	expressed protein	gene	expressed protein	chr6	5316479	5318012	-	promoter
3	LOC_Os08g37930	beta-expansin precursor, putative, expressed	gene	beta-expansin precursor, putative, expressed	chr8	24019195	24019913	-	promoter,downstream
3	LOC_Os10g30530	lectin-like receptor kinase, putative, expressed	gene	lectin-like receptor kinase, putative, expressed	chr10	15802917	15805476	+	promoter
3	LOC_Os04g48280	hypothetical protein	gene	hypothetical protein	chr4	28569458	28571615	-	promoter
3	LOC_Os01g49065	expressed protein	gene	expressed protein	chr1	28192334	28195671	-	promoter
3	LOC_Os11g04409	expressed protein	gene	expressed protein	chr11	1834452	1836931	-	promoter,downstream
3	LOC_Os12g04450	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr12	1895033	1897476	+	promoter
3	LOC_Os12g15410	hypothetical protein	gene	hypothetical protein	chr12	8795759	8796070	+	promoter,downstream
3	LOC_Os10g34680	vacuolar protein sorting-associated protein 52, putative, expressed	gene	vacuolar protein sorting-associated protein 52, putative, expressed	chr10	18415034	18425287	+	promoter
3	LOC_Os06g46390	LSM domain containing protein, expressed	gene	LSM domain containing protein, expressed	chr6	28147941	28148791	-	promoter
3	LOC_Os09g26170	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr9	15770482	15771823	-	promoter
3	LOC_Os01g54800	hypothetical protein	gene	hypothetical protein	chr1	31520178	31520630	+	promoter
3	LOC_Os11g19790	O-methyltransferase, putative	gene	O-methyltransferase, putative	chr11	11397292	11398628	-	promoter
3	LOC_Os11g02630	expressed protein	gene	expressed protein	chr11	836784	838910	-	promoter
3	LOC_Os11g01430	hypothetical protein	gene	hypothetical protein	chr11	254163	255783	+	promoter,downstream
3	LOC_Os11g01790	protein phosphatase 2c, putative, expressed	gene	protein phosphatase 2c, putative, expressed	chr11	421278	424473	+	promoter
3	LOC_Os11g06310	integral membrane protein, putative	gene	integral membrane protein, putative	chr11	3022645	3023268	+	promoter,downstream
3	LOC_Os12g10290	hypothetical protein	gene	hypothetical protein	chr12	5439409	5439792	-	promoter
3	LOC_Os03g63050	hypothetical protein	gene	hypothetical protein	chr3	35646874	35647551	+	promoter
3	LOC_Os09g10670	hypothetical protein	gene	hypothetical protein	chr9	5819495	5819982	-	promoter
3	LOC_Os07g46584	unknown	gene	unknown	chr7	27822794	27823521	-	promoter,downstream
3	LOC_Os01g42840	hypothetical protein	gene	hypothetical protein	chr1	24379038	24379553	+	promoter,downstream
3	LOC_Os11g26140	cysteine-rich receptor-like protein kinase 4 precursor, putative	gene	cysteine-rich receptor-like protein kinase 4 precursor, putative	chr11	14505551	14508561	+	promoter
3	LOC_Os11g01030	conserved hypothetical protein	gene	conserved hypothetical protein	chr11	6099	9062	-	promoter
3	LOC_Os02g58520	CAMK_CAMK_like.16 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.16 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr2	35769161	35771397	+	promoter
3	LOC_Os06g12800	conserved hypothetical protein	gene	conserved hypothetical protein	chr6	6994344	6995672	-	promoter
3	LOC_Os04g52740	expressed protein	gene	expressed protein	chr4	31222378	31222791	-	promoter
3	LOC_Os03g60760	hypothetical protein	gene	hypothetical protein	chr3	34526109	34526378	+	promoter
3	LOC_Os10g03920	zinc finger, RING-type, putative	gene	zinc finger, RING-type, putative	chr10	1782301	1782954	+	promoter,downstream
3	LOC_Os03g12850	hypothetical protein	gene	hypothetical protein	chr3	6907144	6908131	+	promoter
3	LOC_Os02g32580	expressed protein	gene	expressed protein	chr2	19297528	19298753	-	promoter
3	LOC_Os06g06290	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr6	2907025	2909917	-	promoter
3	LOC_Os03g59660	clathrin adaptor complex small chain domain containing protein, expressed	gene	clathrin adaptor complex small chain domain containing protein, expressed	chr3	33961990	33964389	+	promoter
3	LOC_Os01g67090	IQ calmodulin-binding motif domain containing protein, expressed	gene	IQ calmodulin-binding motif domain containing protein, expressed	chr1	38945657	38949784	+	promoter
3	LOC_Os10g35260	Rf1, mitochondrial precursor, putative, expressed	gene	Rf1, mitochondrial precursor, putative, expressed	chr10	18775386	18777640	-	promoter
3	LOC_Os01g42540	ENT domain containing protein	gene	ENT domain containing protein	chr1	24190665	24192049	-	promoter
3	LOC_Os06g10820	helix-loop-helix DNA-binding domain containing protein	gene	helix-loop-helix DNA-binding domain containing protein	chr6	5641246	5641881	+	promoter
3	LOC_Os01g03170	seven in absentia protein family protein, expressed	gene	seven in absentia protein family protein, expressed	chr1	1237623	1241351	+	promoter
3	LOC_Os06g15560	expressed protein	gene	expressed protein	chr6	8824457	8826102	+	promoter,downstream
3	LOC_Os02g13980	hypothetical protein	gene	hypothetical protein	chr2	7627748	7628170	-	promoter
3	LOC_Os11g14120	expressed protein	gene	expressed protein	chr11	7861453	7863365	+	promoter
3	LOC_Os03g02700	HOTHEAD precursor, putative, expressed	gene	HOTHEAD precursor, putative, expressed	chr3	1007381	1009810	+	promoter
3	LOC_Os01g42130	expressed protein	gene	expressed protein	chr1	23884254	23884681	-	promoter,downstream
3	LOC_Os07g33910	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr7	20276403	20278943	-	promoter
3	LOC_Os02g55400	ATPase 8, plasma membrane-type, putative, expressed	gene	ATPase 8, plasma membrane-type, putative, expressed	chr2	33925949	33930311	+	promoter,downstream
3	LOC_Os09g37720	RNA recognition motif containing protein, expressed	gene	RNA recognition motif containing protein, expressed	chr9	21742122	21743113	-	promoter
3	LOC_Os02g46500	U-box, putative, expressed	gene	U-box, putative, expressed	chr2	28346183	28347672	+	promoter
3	LOC_Os04g49870	hypothetical protein	gene	hypothetical protein	chr4	29545683	29547353	+	promoter
3	LOC_Os02g51600	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	gene	endonuclease/exonuclease/phosphatase family domain containing protein, expressed	chr2	31595497	31598528	+	promoter,downstream
3	LOC_Os05g45710	serine acetyltransferase protein, putative, expressed	gene	serine acetyltransferase protein, putative, expressed	chr5	26417420	26418768	-	promoter
3	LOC_Os05g02050	mitochondrial import inner membrane translocase subunit Tim, putative	gene	mitochondrial import inner membrane translocase subunit Tim, putative	chr5	599360	599710	-	promoter
3	LOC_Os02g25620	expressed protein	gene	expressed protein	chr2	14967978	14968730	+	promoter,downstream
3	LOC_Os03g11370	B3 DNA binding domain containing protein, expressed	gene	B3 DNA binding domain containing protein, expressed	chr3	5857227	5858977	+	promoter
3	LOC_Os01g67860	fructose-bisphospate aldolase isozyme, putative, expressed	gene	fructose-bisphospate aldolase isozyme, putative, expressed	chr1	39432288	39434670	-	promoter
3	LOC_Os06g40760	expressed protein	gene	expressed protein	chr6	24295665	24296324	+	promoter
3	LOC_Os02g26170	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	15362388	15362723	-	promoter
3	LOC_Os10g33360	conserved hypothetical protein	gene	conserved hypothetical protein	chr10	17476734	17477033	-	promoter
3	LOC_Os11g05660	OsFBX396 - F-box domain containing protein, expressed	gene	OsFBX396 - F-box domain containing protein, expressed	chr11	2564875	2566295	-	promoter
3	LOC_Os02g09390	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr2	4824243	4825852	+	promoter
3	LOC_Os03g29970	histone-like transcription factor and archaeal histone, putative, expressed	gene	histone-like transcription factor and archaeal histone, putative, expressed	chr3	17084202	17086196	+	promoter
3	LOC_Os04g33070	hypothetical protein	gene	hypothetical protein	chr4	19848122	19848391	-	promoter,downstream
3	LOC_Os01g34440	hypothetical protein	gene	hypothetical protein	chr1	18989553	18990470	-	promoter
3	LOC_Os05g32730	tetratricopeptide-like helical, putative, expressed	gene	tetratricopeptide-like helical, putative, expressed	chr5	19104058	19105719	-	promoter
3	LOC_Os02g52460	zinc knuckle domain containing protein, expressed	gene	zinc knuckle domain containing protein, expressed	chr2	32089453	32092841	-	promoter,downstream
3	LOC_Os02g27880	EF hand family protein	gene	EF hand family protein	chr2	16495886	16501371	+	promoter
3	LOC_Os03g06170	hsp20/alpha crystallin family protein, putative, expressed	gene	hsp20/alpha crystallin family protein, putative, expressed	chr3	3094748	3095974	-	promoter
3	LOC_Os03g12540	hypothetical protein	gene	hypothetical protein	chr3	6640416	6641114	-	promoter
3	LOC_Os07g43310	ribosomal protein L7/L12 C-terminal domain containing protein, expressed	gene	ribosomal protein L7/L12 C-terminal domain containing protein, expressed	chr7	25929290	25930369	-	promoter
3	LOC_Os11g47410	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr11	27994159	27996136	+	promoter
3	LOC_Os11g09860	hypothetical protein	gene	hypothetical protein	chr11	5276244	5276684	-	promoter
3	LOC_Os02g56480	PB1 domain containing protein, expressed	gene	PB1 domain containing protein, expressed	chr2	34568083	34570304	-	promoter
3	LOC_Os02g02400	catalase isozyme A, putative, expressed	gene	catalase isozyme A, putative, expressed	chr2	824850	827644	-	promoter
3	LOC_Os01g01190	phosphoesterase family protein, putative, expressed	gene	phosphoesterase family protein, putative, expressed	chr1	88653	90521	-	promoter
3	LOC_Os10g03610	heat shock protein DnaJ, putative	gene	heat shock protein DnaJ, putative	chr10	1560380	1561141	+	promoter,downstream
3	LOC_Os02g48140	hsp20/alpha crystallin family protein, putative, expressed	gene	hsp20/alpha crystallin family protein, putative, expressed	chr2	29462544	29463372	+	promoter
3	LOC_Os08g01370	expressed protein	gene	expressed protein	chr8	233133	233423	-	promoter
3	LOC_Os05g44340	heat shock protein 101, putative, expressed	gene	heat shock protein 101, putative, expressed	chr5	25740951	25744581	-	promoter
3	LOC_Os12g21570	retrotransposon protein, putative, Ty3-gypsy subclass, expressed	gene	retrotransposon protein, putative, Ty3-gypsy subclass, expressed	chr12	12122597	12126049	+	promoter
3	LOC_Os03g12620	glycosyl hydrolases family 17, putative, expressed	gene	glycosyl hydrolases family 17, putative, expressed	chr3	6704818	6709465	-	promoter
3	LOC_Os01g37860	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr1	21187684	21193343	-	promoter
3	LOC_Os10g42810	hypothetical protein	gene	hypothetical protein	chr10	23015758	23015978	+	promoter,downstream
3	LOC_Os08g03600	expressed protein	gene	expressed protein	chr8	1680536	1683146	-	promoter
3	LOC_Os09g27360	hypothetical protein	gene	hypothetical protein	chr9	16630080	16630607	+	promoter
3	LOC_Os12g34410	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr12	20819337	20821283	+	promoter
3	LOC_Os09g06570	expressed protein	gene	expressed protein	chr9	3125602	3126160	-	promoter
3	LOC_Os12g16710	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr12	9569197	9576126	-	promoter
3	LOC_Os03g15360	nmrA-like family domain containing protein	gene	nmrA-like family domain containing protein	chr3	8405791	8407234	-	promoter
3	LOC_Os04g33650	hypothetical protein	gene	hypothetical protein	chr4	20208954	20212030	+	promoter
3	LOC_Os12g05820	hypothetical protein	gene	hypothetical protein	chr12	2682244	2682651	+	promoter
3	LOC_Os03g06520	sulfate transporter, putative, expressed	gene	sulfate transporter, putative, expressed	chr3	3270146	3275906	-	promoter
3	LOC_Os08g39320	conserved hypothetical protein	gene	conserved hypothetical protein	chr8	24840150	24841470	-	promoter
3	LOC_Os07g02100	flavin-containing monooxygenase family protein, putative, expressed	gene	flavin-containing monooxygenase family protein, putative, expressed	chr7	663612	666146	+	promoter
3	LOC_Os03g31500	conserved hypothetical protein	gene	conserved hypothetical protein	chr3	17942559	17942858	-	promoter
3	LOC_Os03g62530	hypothetical protein	gene	hypothetical protein	chr3	35400421	35401451	+	promoter
3	LOC_Os01g72700	expressed protein	gene	expressed protein	chr1	42183196	42186651	+	promoter
3	LOC_Os07g42960	phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplast precursor, putative, expressed	gene	phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplast precursor, putative, expressed	chr7	25725424	25729187	-	promoter
3	LOC_Os09g36700	ribonuclease T2 family domain containing protein, expressed	gene	ribonuclease T2 family domain containing protein, expressed	chr9	21164701	21167169	-	promoter
3	LOC_Os05g24610	retrotransposon protein, putative, LINE subclass	gene	retrotransposon protein, putative, LINE subclass	chr5	14140894	14148074	+	promoter
3	LOC_Os06g07170	hypothetical protein	gene	hypothetical protein	chr6	3432634	3433780	-	promoter
3	LOC_Os01g36950	N-rich protein, putative, expressed	gene	N-rich protein, putative, expressed	chr1	20598269	20601216	-	promoter
3	LOC_Os04g57750	plastocyanin-like domain containing protein, putative, expressed	gene	plastocyanin-like domain containing protein, putative, expressed	chr4	34212003	34213068	-	promoter
3	LOC_Os02g06215	RNA-directed DNA polymerase, putative	gene	RNA-directed DNA polymerase, putative	chr2	3110119	3111444	-	promoter
3	LOC_Os11g04470	hypothetical protein	gene	hypothetical protein	chr11	1864568	1865996	-	promoter
3	LOC_Os01g70850	esterase, putative, expressed	gene	esterase, putative, expressed	chr1	41003245	41005094	-	promoter
3	LOC_Os11g01900	hypothetical protein	gene	hypothetical protein	chr11	487827	488893	-	promoter
3	LOC_Os04g01790	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr4	501285	505005	+	promoter
3	LOC_Os08g37660	plastocyanin-like domain containing protein, putative, expressed	gene	plastocyanin-like domain containing protein, putative, expressed	chr8	23850502	23851765	-	promoter
3	LOC_Os05g50090	oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed	gene	oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed	chr5	28643260	28645878	-	promoter
3	LOC_Os06g05920	Rf1, mitochondrial precursor, putative, expressed	gene	Rf1, mitochondrial precursor, putative, expressed	chr6	2709263	2711459	+	promoter
3	LOC_Os08g39960	3-oxoacyl-reductase, chloroplast precursor, putative, expressed	gene	3-oxoacyl-reductase, chloroplast precursor, putative, expressed	chr8	25316308	25318007	-	promoter
3	LOC_Os04g24520	ribosomal protein L51, putative, expressed	gene	ribosomal protein L51, putative, expressed	chr4	14057719	14058497	-	promoter
3	LOC_Os02g39290	TRAF-type zinc finger family protein, expressed	gene	TRAF-type zinc finger family protein, expressed	chr2	23720367	23723259	-	promoter
3	LOC_Os03g48110	expressed protein	gene	expressed protein	chr3	27358011	27358295	+	promoter
3	LOC_Os10g39932	hypothetical protein	gene	hypothetical protein	chr10	21302737	21303294	-	promoter,downstream
3	LOC_Os02g19180	ZOS2-06 - C2H2 zinc finger protein	gene	ZOS2-06 - C2H2 zinc finger protein	chr2	11182943	11184386	-	promoter
3	LOC_Os03g55320	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr3	31464982	31467770	-	promoter
3	LOC_Os10g38640	glutathione S-transferase, putative	gene	glutathione S-transferase, putative	chr10	20532239	20533069	+	promoter
3	LOC_Os02g37960	expressed protein	gene	expressed protein	chr2	22935412	22937247	+	promoter
3	LOC_Os01g62030	disease resistance-responsive family protein, putative	gene	disease resistance-responsive family protein, putative	chr1	35899692	35900183	-	promoter
3	LOC_Os07g06460	expressed protein	gene	expressed protein	chr7	3123915	3124713	+	promoter,downstream
3	LOC_Os07g18730	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr7	11076089	11079630	-	promoter
3	LOC_Os09g12510	expressed protein	gene	expressed protein	chr9	7171518	7172593	+	promoter
3	LOC_Os04g22960	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr4	13020864	13023859	+	promoter
3	LOC_Os03g12640	hypothetical protein	gene	hypothetical protein	chr3	6719747	6720095	-	promoter
3	LOC_Os01g41200	heavy metal-associated domain containing protein, expressed	gene	heavy metal-associated domain containing protein, expressed	chr1	23323421	23324252	+	promoter
3	LOC_Os11g35310	phytosulfokines precursor, putative	gene	phytosulfokines precursor, putative	chr11	20236613	20237063	+	promoter
3	LOC_Os01g56040	zinc finger A20 and AN1 domain-containing stress-associated protein, putative	gene	zinc finger A20 and AN1 domain-containing stress-associated protein, putative	chr1	32266011	32268414	+	promoter
3	LOC_Os03g62600	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr3	35425598	35427459	-	promoter
3	LOC_Os12g33030	hypothetical protein	gene	hypothetical protein	chr12	19925648	19926672	-	promoter
3	LOC_Os05g01790	expressed protein	gene	expressed protein	chr5	477914	479227	+	promoter
3	LOC_Os03g06430	expressed protein	gene	expressed protein	chr3	3211755	3212170	-	promoter
3	LOC_Os01g54090	expressed protein	gene	expressed protein	chr1	31107273	31109104	+	promoter,downstream
3	LOC_Os12g39520	OsFBDUF66 - F-box and DUF domain containing protein, expressed	gene	OsFBDUF66 - F-box and DUF domain containing protein, expressed	chr12	24325532	24327046	-	promoter
3	LOC_Os05g50300	AMP-binding enzyme, putative, expressed	gene	AMP-binding enzyme, putative, expressed	chr5	28767303	28769486	+	promoter
3	LOC_Os03g04550	expressed protein	gene	expressed protein	chr3	2122684	2124733	+	promoter
3	LOC_Os07g10360	hypothetical protein	gene	hypothetical protein	chr7	5557781	5558350	+	promoter
3	LOC_Os03g39920	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr3	22185715	22191677	+	promoter
3	LOC_Os10g28240	calcium-transporting ATPase, plasma membrane-type, putative, expressed	gene	calcium-transporting ATPase, plasma membrane-type, putative, expressed	chr10	14610760	14614136	-	promoter
3	LOC_Os04g21900	hypothetical protein	gene	hypothetical protein	chr4	12391174	12393614	-	promoter
3	LOC_Os09g38020	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	gene	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	chr9	21911482	21912202	-	promoter
3	LOC_Os11g45600	rust resistance protein Rp1-dp8, putative	gene	rust resistance protein Rp1-dp8, putative	chr11	27125217	27126284	-	promoter
3	LOC_Os11g20020	hypothetical protein	gene	hypothetical protein	chr11	11514047	11515713	+	promoter
3	LOC_Os10g07606	hypothetical protein	gene	hypothetical protein	chr10	4216925	4217614	-	promoter
3	LOC_Os11g02210	hypothetical protein	gene	hypothetical protein	chr11	619887	620816	-	promoter,downstream
3	LOC_Os01g63880	expressed protein	gene	expressed protein	chr1	37064350	37067853	-	promoter,downstream
3	LOC_Os01g61260	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr1	35441919	35442869	-	promoter
3	LOC_Os12g38860	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr12	23851800	23855418	-	promoter
3	LOC_Os07g44670	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr7	26645627	26652734	-	promoter
3	LOC_Os01g73440	conserved hypothetical protein	gene	conserved hypothetical protein	chr1	42558004	42558909	+	promoter
3	LOC_Os06g34730	expressed protein	gene	expressed protein	chr6	20177123	20178046	-	promoter
3	LOC_Os04g37720	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr4	22247056	22249627	+	promoter
3	LOC_Os06g40640	fructose-bisphospate aldolase isozyme, putative, expressed	gene	fructose-bisphospate aldolase isozyme, putative, expressed	chr6	24226139	24228293	+	promoter,downstream
3	LOC_Os01g28160	hypothetical protein	gene	hypothetical protein	chr1	15780905	15781989	+	promoter
3	LOC_Os11g39030	RNA recognition motif containing protein, putative	gene	RNA recognition motif containing protein, putative	chr11	22769907	22771154	-	promoter
3	LOC_Os08g16790	DUF593 domain containing protein, expressed	gene	DUF593 domain containing protein, expressed	chr8	10268500	10269938	-	promoter
3	LOC_Os04g55070	gibberellin 20 oxidase 2, putative	gene	gibberellin 20 oxidase 2, putative	chr4	32562078	32565717	-	promoter
3	LOC_Os06g11135	gibberellin receptor GID1L2, putative, expressed	gene	gibberellin receptor GID1L2, putative, expressed	chr6	5836565	5837524	-	promoter,downstream
3	LOC_Os09g12780	expressed protein	gene	expressed protein	chr9	7333171	7334241	+	promoter,downstream
3	LOC_Os08g04100	hypothetical protein	gene	hypothetical protein	chr8	1991974	1992695	+	promoter,downstream
3	LOC_Os02g37060	photosystem II 5 kDa protein, chloroplast precursor, putative, expressed	gene	photosystem II 5 kDa protein, chloroplast precursor, putative, expressed	chr2	22384496	22385262	+	promoter
3	LOC_Os04g30940	hypothetical protein	gene	hypothetical protein	chr4	18323371	18324955	-	promoter
3	LOC_Os04g42080	hypothetical protein	gene	hypothetical protein	chr4	24727894	24728606	+	promoter
3	LOC_Os04g08280	retrotransposon protein, putative, Ty3-gypsy subclass, expressed	gene	retrotransposon protein, putative, Ty3-gypsy subclass, expressed	chr4	4414780	4416746	-	promoter
3	LOC_Os05g30710	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr5	17722995	17725460	-	promoter
3	LOC_Os06g29360	hypothetical protein	gene	hypothetical protein	chr6	16784964	16786115	-	promoter
3	LOC_Os02g22600	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr2	13471763	13472498	+	promoter
3	LOC_Os06g48630	ANTH/ENTH domain containing protein, putative	gene	ANTH/ENTH domain containing protein, putative	chr6	29418864	29421853	+	promoter,downstream
3	LOC_Os07g37620	fiber expressed protein, putative, expressed	gene	fiber expressed protein, putative, expressed	chr7	22542283	22543962	-	promoter
3	LOC_Os08g44410	harpin-induced protein 1 domain containing protein, expressed	gene	harpin-induced protein 1 domain containing protein, expressed	chr8	27939307	27940480	+	promoter
3	LOC_Os03g19540	expressed protein	gene	expressed protein	chr3	10987768	10988911	+	promoter
3	LOC_Os11g09684	expressed protein	gene	expressed protein	chr11	5167294	5168093	+	promoter
3	LOC_Os12g13170	transcription factor, putative, expressed	gene	transcription factor, putative, expressed	chr12	7329478	7335516	-	promoter
3	LOC_Os03g39390	hypothetical protein	gene	hypothetical protein	chr3	21884505	21884945	-	promoter
3	LOC_Os06g02410	expressed protein	gene	expressed protein	chr6	827717	829762	-	promoter,downstream
3	LOC_Os11g34840	MMP37-like protein, mitochondrial precursor, putative	gene	MMP37-like protein, mitochondrial precursor, putative	chr11	19950468	19952993	-	promoter,downstream
3	LOC_Os02g31910	potassium transporter, putative, expressed	gene	potassium transporter, putative, expressed	chr2	18839390	18845973	-	promoter
3	LOC_Os10g22900	hypothetical protein	gene	hypothetical protein	chr10	11829056	11830580	-	promoter
3	LOC_Os01g61170	prenylated rab acceptor, putative	gene	prenylated rab acceptor, putative	chr1	35406887	35407555	-	promoter
3	LOC_Os12g39670	hypothetical protein	gene	hypothetical protein	chr12	24458983	24467282	+	promoter
3	LOC_Os09g39510	Cupin domain containing protein, expressed	gene	Cupin domain containing protein, expressed	chr9	22694639	22695664	-	promoter
3	LOC_Os01g42990	PPR repeat domain containing protein, putative	gene	PPR repeat domain containing protein, putative	chr1	24483505	24486787	+	promoter,downstream
3	LOC_Os03g08834	expressed protein	gene	expressed protein	chr3	4568626	4570027	-	promoter
3	LOC_Os05g37225	expressed protein	gene	expressed protein	chr5	21699070	21700182	-	promoter
3	LOC_Os10g20235	expressed protein	gene	expressed protein	chr10	10095956	10096394	-	promoter
3	LOC_Os07g42104	expressed protein	gene	expressed protein	chr7	25194557	25208001	+	promoter
3	LOC_Os04g36760	enzyme of the cupin superfamily protein, putative, expressed	gene	enzyme of the cupin superfamily protein, putative, expressed	chr4	22017994	22018846	-	promoter
3	LOC_Os07g39520	STE_PAK_Ste20_Slob_Wnk.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	gene	STE_PAK_Ste20_Slob_Wnk.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	chr7	23676870	23678955	+	promoter
3	LOC_Os11g03920	expressed protein	gene	expressed protein	chr11	1564339	1565354	-	promoter
3	LOC_Os04g27860	40S ribosomal protein S27, putative	gene	40S ribosomal protein S27, putative	chr4	16286079	16287286	+	promoter,downstream
3	LOC_Os06g10660	lysM domain-containing GPI-anchored protein 1 precursor, putative, expressed	gene	lysM domain-containing GPI-anchored protein 1 precursor, putative, expressed	chr6	5558910	5562098	+	promoter
3	LOC_Os11g36060	THUMP domain-containing protein, putative, expressed	gene	THUMP domain-containing protein, putative, expressed	chr11	20722183	20731849	+	promoter
3	LOC_Os01g08980	expressed protein	gene	expressed protein	chr1	4503620	4504211	-	promoter
3	LOC_Os02g16610	harpin-induced protein 1 domain containing protein	gene	harpin-induced protein 1 domain containing protein	chr2	9495105	9495710	+	promoter
3	LOC_Os04g43360	Os4bglu14 - monolignol beta-glucoside homologue without catalytic acid/base, expressed	gene	Os4bglu14 - monolignol beta-glucoside homologue without catalytic acid/base, expressed	chr4	25455129	25459468	-	promoter
3	LOC_Os09g36680	ribonuclease T2 family domain containing protein, expressed	gene	ribonuclease T2 family domain containing protein, expressed	chr9	21155475	21157464	-	promoter
3	LOC_Os02g55190	expressed protein	gene	expressed protein	chr2	33799051	33800774	+	promoter,downstream
3	LOC_Os03g18320	hypothetical protein	gene	hypothetical protein	chr3	10270205	10270690	-	promoter
3	LOC_Os11g39330	NB-ARC domain containing protein, putative	gene	NB-ARC domain containing protein, putative	chr11	22949495	22952508	-	promoter
3	LOC_Os07g34650	expressed protein	gene	expressed protein	chr7	20767402	20771357	-	promoter
3	LOC_Os02g21330	expressed protein	gene	expressed protein	chr2	12656255	12657287	-	promoter
3	LOC_Os08g30800	KED, putative, expressed	gene	KED, putative, expressed	chr8	19014534	19015745	-	promoter
3	LOC_Os08g30070	expressed protein	gene	expressed protein	chr8	18478226	18484052	-	promoter
3	LOC_Os02g42570	ferredoxin-thioredoxin reductase, variable chain, putative, expressed	gene	ferredoxin-thioredoxin reductase, variable chain, putative, expressed	chr2	25584057	25584935	-	promoter
3	LOC_Os05g08450	expressed protein	gene	expressed protein	chr5	4613602	4615279	+	promoter
3	LOC_Os03g15660	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr3	8634903	8636037	-	promoter
3	LOC_Os01g07890	expressed protein	gene	expressed protein	chr1	3817046	3817774	-	promoter,downstream
3	LOC_Os03g16410	conserved hypothetical protein	gene	conserved hypothetical protein	chr3	9050791	9051258	-	promoter
3	LOC_Os09g09439	unknown	gene	unknown	chr9	5084024	5084781	+	promoter,downstream
3	LOC_Os11g25100	tropinone reductase, putative, expressed	gene	tropinone reductase, putative, expressed	chr11	13839419	13840002	+	promoter
3	LOC_Os09g07580	mla1, putative	gene	mla1, putative	chr9	3796045	3801606	-	promoter
3	LOC_Os01g01019	expressed protein	gene	expressed protein	chr1	10218	11435	+	promoter
3	LOC_Os07g25690	subtilisin N-terminal Region family protein, expressed	gene	subtilisin N-terminal Region family protein, expressed	chr7	14732242	14733953	+	promoter
3	LOC_Os07g45290	cytochrome P450 72A1, putative, expressed	gene	cytochrome P450 72A1, putative, expressed	chr7	27018251	27022524	-	promoter
3	LOC_Os06g51440	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr6	31156331	31157299	+	promoter
3	LOC_Os01g03750	expressed protein	gene	expressed protein	chr1	1568585	1569939	-	promoter,downstream
3	LOC_Os04g06350	conserved hypothetical protein	gene	conserved hypothetical protein	chr4	3307723	3308293	+	promoter
3	LOC_Os03g17140	expressed protein	gene	expressed protein	chr3	9518819	9520047	-	promoter
3	LOC_Os07g12780	cyclin, putative, expressed	gene	cyclin, putative, expressed	chr7	7312557	7313752	+	promoter,downstream
3	LOC_Os06g08450	histidine kinase, putative	gene	histidine kinase, putative	chr6	4141852	4149977	-	promoter
3	LOC_Os03g11850	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr3	6205887	6210266	+	promoter
3	LOC_Os03g05030	dirigent, putative, expressed	gene	dirigent, putative, expressed	chr3	2448317	2449249	+	promoter,downstream
3	LOC_Os05g02230	expressed protein	gene	expressed protein	chr5	706799	707862	+	promoter
3	LOC_Os11g36450	OsFBO15 - F-box and other domain containing protein, expressed	gene	OsFBO15 - F-box and other domain containing protein, expressed	chr11	21024439	21027281	-	promoter
3	LOC_Os08g05540	expressed protein	gene	expressed protein	chr8	2967203	2968075	-	promoter
3	LOC_Os02g17534	xyloglucan fucosyltransferase, putative, expressed	gene	xyloglucan fucosyltransferase, putative, expressed	chr2	10088208	10095191	-	promoter
3	LOC_Os03g60210	DUF567 domain containing protein, putative, expressed	gene	DUF567 domain containing protein, putative, expressed	chr3	34235031	34236308	-	promoter
3	LOC_Os01g08860	hsp20/alpha crystallin family protein, putative, expressed	gene	hsp20/alpha crystallin family protein, putative, expressed	chr1	4448032	4448876	-	promoter,downstream
3	LOC_Os03g15050	phosphoenolpyruvate carboxykinase, putative, expressed	gene	phosphoenolpyruvate carboxykinase, putative, expressed	chr3	8217729	8223065	-	promoter
3	LOC_Os02g45880	expressed protein	gene	expressed protein	chr2	27959724	27960431	+	promoter
3	LOC_Os08g06260	hypothetical protein	gene	hypothetical protein	chr8	3446786	3447022	+	promoter
3	LOC_Os02g06530	armadillo/beta-catenin repeat family protein, putative, expressed	gene	armadillo/beta-catenin repeat family protein, putative, expressed	chr2	3263666	3265604	+	promoter
3	LOC_Os02g17870	microfibrillar-associated protein 1, putative, expressed	gene	microfibrillar-associated protein 1, putative, expressed	chr2	10351704	10354070	-	promoter
3	LOC_Os05g44930	receptor-like protein kinase, putative, expressed	gene	receptor-like protein kinase, putative, expressed	chr5	26050697	26055431	+	promoter
3	LOC_Os05g50570	OsSCP29 - Putative Serine Carboxypeptidase homologue, expressed	gene	OsSCP29 - Putative Serine Carboxypeptidase homologue, expressed	chr5	28933328	28934901	+	promoter
3	LOC_Os12g44240	N-acetylglucosaminyltransferase, putative, expressed	gene	N-acetylglucosaminyltransferase, putative, expressed	chr12	27402631	27404909	+	promoter,downstream
3	LOC_Os02g57170	expressed protein	gene	expressed protein	chr2	35005523	35007516	-	promoter
3	LOC_Os08g15450	nodulin, putative	gene	nodulin, putative	chr8	9398553	9401237	+	promoter
3	LOC_Os01g05140	expressed protein	gene	expressed protein	chr1	2405438	2407067	+	promoter
3	LOC_Os02g45660	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor, putative, expressed	gene	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor, putative, expressed	chr2	27767497	27769641	-	promoter,downstream
3	LOC_Os02g41560	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr2	24917999	24919480	+	promoter,downstream
3	LOC_Os01g56680	photosystem II reaction center W protein, chloroplast precursor, putative, expressed	gene	photosystem II reaction center W protein, chloroplast precursor, putative, expressed	chr1	32706787	32708250	-	promoter
3	LOC_Os03g06750	expressed protein	gene	expressed protein	chr3	3432020	3434430	-	promoter,downstream
3	LOC_Os03g25464	hypothetical protein	gene	hypothetical protein	chr3	14548903	14549881	-	promoter
3	LOC_Os01g50700	dehydrin family protein, expressed	gene	dehydrin family protein, expressed	chr1	29118716	29123591	+	promoter
3	LOC_Os03g12360	trehalose-6-phosphate synthase, putative, expressed	gene	trehalose-6-phosphate synthase, putative, expressed	chr3	6518051	6522487	-	promoter
3	LOC_Os05g42110	allyl alcohol dehydrogenase, putative, expressed	gene	allyl alcohol dehydrogenase, putative, expressed	chr5	24563766	24564272	-	promoter
3	LOC_Os03g59180	expressed protein	gene	expressed protein	chr3	33689933	33691349	+	promoter
3	LOC_Os03g25460	OsRCI2-4 - Putative low temperature and salt responsive protein, expressed	gene	OsRCI2-4 - Putative low temperature and salt responsive protein, expressed	chr3	14547593	14548296	-	promoter
3	LOC_Os12g05020	jasmonate-induced protein, putative	gene	jasmonate-induced protein, putative	chr12	2178172	2179893	+	promoter
3	LOC_Os06g06480	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	gene	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	chr6	3045566	3048172	-	promoter
3	LOC_Os06g48660	DEFL21 - Defensin and Defensin-like DEFL family, expressed	gene	DEFL21 - Defensin and Defensin-like DEFL family, expressed	chr6	29440621	29443250	+	promoter
3	LOC_Os07g27470	transposon protein, putative, CACTA, En/Spm sub-class	gene	transposon protein, putative, CACTA, En/Spm sub-class	chr7	16003597	16006443	-	promoter
3	LOC_Os02g12460	hypothetical protein	gene	hypothetical protein	chr2	6496710	6497737	-	promoter
3	LOC_Os06g06180	transferase family protein, putative, expressed	gene	transferase family protein, putative, expressed	chr6	2860701	2862180	-	promoter
3	LOC_Os05g16664	expressed protein	gene	expressed protein	chr5	9454797	9455742	-	promoter
3	LOC_Os06g44820	PPR repeat domain containing protein, putative	gene	PPR repeat domain containing protein, putative	chr6	27074173	27075641	+	promoter
3	LOC_Os12g02290	LTPL23 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	gene	LTPL23 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	chr12	722133	723301	+	promoter
3	LOC_Os06g02040	late embryogenesis abundant group 1, putative, expressed	gene	late embryogenesis abundant group 1, putative, expressed	chr6	592558	593234	+	promoter
3	LOC_Os01g26010	hypothetical protein	gene	hypothetical protein	chr1	14748376	14749064	+	promoter
3	LOC_Os01g32310	hypothetical protein	gene	hypothetical protein	chr1	17713122	17713595	-	promoter
3	LOC_Os10g08950	conserved hypothetical protein	gene	conserved hypothetical protein	chr10	4859535	4860284	+	promoter
3	LOC_Os03g49590	hypothetical protein	gene	hypothetical protein	chr3	28232450	28233103	-	promoter,downstream
3	LOC_Os07g41650	pectinesterase, putative, expressed	gene	pectinesterase, putative, expressed	chr7	24960175	24963390	-	promoter,downstream
3	LOC_Os07g41910	DC1 domain-containing protein, putative	gene	DC1 domain-containing protein, putative	chr7	25105001	25105504	+	promoter
3	LOC_Os05g07880	phospholipase D, putative, expressed	gene	phospholipase D, putative, expressed	chr5	4255740	4260310	-	promoter
3	LOC_Os10g18370	transcriptional regulator, putative, expressed	gene	transcriptional regulator, putative, expressed	chr10	9266713	9268041	+	promoter
3	LOC_Os05g44110	conserved hypothetical protein	gene	conserved hypothetical protein	chr5	25584459	25586435	-	promoter
3	LOC_Os07g43400	SWIM zinc finger family protein, putative, expressed	gene	SWIM zinc finger family protein, putative, expressed	chr7	25984592	25986495	+	promoter
3	LOC_Os11g06750	ribosomal protein L3, putative, expressed	gene	ribosomal protein L3, putative, expressed	chr11	3290051	3293042	+	promoter
3	LOC_Os09g37250	high mobility group, putative	gene	high mobility group, putative	chr9	21515372	21517140	-	promoter
3	LOC_Os10g35170	semialdehyde dehydrogenase, NAD binding domain containing protein, putative, expressed	gene	semialdehyde dehydrogenase, NAD binding domain containing protein, putative, expressed	chr10	18701916	18705689	+	promoter
3	LOC_Os06g24930	transposon protein, putative, Ac/Ds sub-class, expressed	gene	transposon protein, putative, Ac/Ds sub-class, expressed	chr6	14615407	14616289	+	promoter
3	LOC_Os03g13110	transposon protein, putative, Mariner sub-class	gene	transposon protein, putative, Mariner sub-class	chr3	7078551	7081284	+	promoter
3	LOC_Os05g32240	hypothetical protein	gene	hypothetical protein	chr5	18739932	18740258	+	promoter
3	LOC_Os02g01890	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr2	488913	490612	+	promoter
3	LOC_Os05g41030	LTPL67 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	gene	LTPL67 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	chr5	23982917	23985264	-	promoter
3	LOC_Os12g02760	DUF567 domain containing protein, putative, expressed	gene	DUF567 domain containing protein, putative, expressed	chr12	974104	976096	-	promoter
3	LOC_Os10g17780	oxidoreductase, FAD-binding family protein	gene	oxidoreductase, FAD-binding family protein	chr10	8926560	8927927	+	promoter
3	LOC_Os02g50372	expressed protein	gene	expressed protein	chr2	30757261	30758996	+	promoter
3	LOC_Os06g27860	poor homologous synapsis 1 protein, putative	gene	poor homologous synapsis 1 protein, putative	chr6	15780721	15784810	-	promoter
3	LOC_Os02g49970	ZIM motif family protein, expressed	gene	ZIM motif family protein, expressed	chr2	30522776	30525251	+	promoter
3	LOC_Os12g14080	expressed protein	gene	expressed protein	chr12	7990303	7992128	-	promoter
3	LOC_Os08g07800	hypothetical protein	gene	hypothetical protein	chr8	4364969	4365642	-	promoter
3	LOC_Os11g39310	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr11	22937286	22941152	-	promoter
3	LOC_Os03g48550	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr3	27667705	27668587	-	promoter
3	LOC_Os01g01060	40S ribosomal protein S5, putative, expressed	gene	40S ribosomal protein S5, putative, expressed	chr1	26136	27651	+	promoter,downstream
3	LOC_Os01g70340	expressed protein	gene	expressed protein	chr1	40742960	40749779	-	promoter
3	LOC_Os03g21820	expansin precursor, putative, expressed	gene	expansin precursor, putative, expressed	chr3	12467980	12469320	-	promoter
3	LOC_Os05g04570	F-box family protein, putative	gene	F-box family protein, putative	chr5	2129226	2132789	-	promoter
3	LOC_Os04g31984	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr4	18980913	18985809	-	promoter
3	LOC_Os12g01020	conserved hypothetical protein	gene	conserved hypothetical protein	chr12	4477	7440	-	promoter
3	LOC_Os11g05370	60S ribosomal protein L26-1, putative, expressed	gene	60S ribosomal protein L26-1, putative, expressed	chr11	2378043	2379078	-	promoter
3	LOC_Os02g40750	pentatricopeptide domain containing protein, putative	gene	pentatricopeptide domain containing protein, putative	chr2	24690987	24692579	-	promoter
3	LOC_Os03g02430	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr3	860238	861775	-	promoter
3	LOC_Os10g31980	retrotransposon protein, putative, LINE subclass	gene	retrotransposon protein, putative, LINE subclass	chr10	16730255	16732817	-	promoter
3	LOC_Os09g31310	acetyltransferase, GNAT family, putative, expressed	gene	acetyltransferase, GNAT family, putative, expressed	chr9	18824515	18825262	-	promoter
3	LOC_Os03g53610	late embryogenesis abundant protein D-34, putative	gene	late embryogenesis abundant protein D-34, putative	chr3	30733744	30734654	-	promoter
3	LOC_Os01g19770	mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	gene	mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	chr1	11220741	11222629	-	promoter
3	LOC_Os02g25920	retrotransposon protein, putative, Ty3-gypsy subclass, expressed	gene	retrotransposon protein, putative, Ty3-gypsy subclass, expressed	chr2	15203633	15207364	+	promoter
3	LOC_Os09g25270	hypothetical protein	gene	hypothetical protein	chr9	15128714	15129076	+	promoter
3	LOC_Os11g06350	hypothetical protein	gene	hypothetical protein	chr11	3036436	3041205	-	promoter
3	LOC_Os02g20440	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	12058720	12061500	-	promoter
3	LOC_Os03g60720	expansin precursor, putative, expressed	gene	expansin precursor, putative, expressed	chr3	34501132	34504149	-	promoter
3	LOC_Os07g37780	ribosomal protein S17, putative	gene	ribosomal protein S17, putative	chr7	22656454	22658181	-	promoter
3	LOC_Os06g43770	expressed protein	gene	expressed protein	chr6	26345139	26346101	-	promoter
3	LOC_Os10g24080	hypothetical protein	gene	hypothetical protein	chr10	12266569	12267410	-	promoter,downstream
3	LOC_Os03g06350	DUF623 domain containing protein, expressed	gene	DUF623 domain containing protein, expressed	chr3	3177088	3178586	-	promoter
3	LOC_Os01g53630	ulp1 protease family protein, putative, expressed	gene	ulp1 protease family protein, putative, expressed	chr1	30787686	30795512	-	promoter
3	LOC_Os05g30535	hypothetical protein	gene	hypothetical protein	chr5	17635716	17636638	+	promoter
3	LOC_Os02g38069	unknown	gene	unknown	chr2	22990739	22991060	-	promoter
3	LOC_Os11g04400	GRAS family transcription factor containing protein	gene	GRAS family transcription factor containing protein	chr11	1828395	1831070	+	promoter,downstream
3	LOC_Os05g45330	expressed protein	gene	expressed protein	chr5	26232914	26233884	-	promoter
3	LOC_Os09g28060	MORN repeat domain containing protein, expressed	gene	MORN repeat domain containing protein, expressed	chr9	17032401	17034509	-	promoter
3	LOC_Os10g34370	expressed protein	gene	expressed protein	chr10	18247512	18249008	-	promoter,downstream
3	LOC_Os06g05680	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr6	2567570	2572372	+	promoter
3	LOC_Os09g20560	pumilio-family RNA binding repeat containing protein	gene	pumilio-family RNA binding repeat containing protein	chr9	12388175	12391354	+	promoter
3	LOC_Os12g41690	membrane associated DUF588 domain containing protein, putative, expressed	gene	membrane associated DUF588 domain containing protein, putative, expressed	chr12	25774020	25779025	-	promoter,downstream
3	LOC_Os03g06600	expressed protein	gene	expressed protein	chr3	3316893	3317836	+	promoter
3	LOC_Os12g26875	expressed protein	gene	expressed protein	chr12	15751285	15752043	-	promoter
3	LOC_Os03g07830	AP2 domain containing protein	gene	AP2 domain containing protein	chr3	3983896	3984852	+	promoter,downstream
3	LOC_Os02g56020	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr2	34290504	34293554	+	promoter,downstream
3	LOC_Os01g42220	conserved hypothetical protein	gene	conserved hypothetical protein	chr1	23921300	23921818	+	promoter
3	LOC_Os01g49200	microtubule associated protein, putative, expressed	gene	microtubule associated protein, putative, expressed	chr1	28281769	28286052	+	promoter
3	LOC_Os08g35030	hypothetical protein	gene	hypothetical protein	chr8	22063467	22064964	-	promoter
3	LOC_Os12g05760	DnaK family protein, putative, expressed	gene	DnaK family protein, putative, expressed	chr12	2652133	2653759	+	promoter
3	LOC_Os08g41120	MBTB29 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain	gene	MBTB29 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain	chr8	25981540	25982565	-	promoter
3	LOC_Os02g33300	hypothetical protein	gene	hypothetical protein	chr2	19779468	19779782	-	promoter
3	LOC_Os10g02500	serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed	gene	serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed	chr10	925328	929275	-	promoter
3	LOC_Os10g35300	dof zinc finger domain containing protein, putative, expressed	gene	dof zinc finger domain containing protein, putative, expressed	chr10	18802029	18803570	-	promoter
3	LOC_Os02g14790	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr2	8204967	8206392	-	promoter
3	LOC_Os01g21870	expressed protein	gene	expressed protein	chr1	12269011	12269376	-	promoter
3	LOC_Os03g01160	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr3	109086	113398	-	promoter
3	LOC_Os07g06470	nuclear transcription factor Y subunit, putative, expressed	gene	nuclear transcription factor Y subunit, putative, expressed	chr7	3126704	3129758	-	promoter
3	LOC_Os08g37770	hypothetical protein	gene	hypothetical protein	chr8	23922832	23923092	+	promoter,downstream
3	LOC_Os02g02140	receptor protein kinase CLAVATA1 precursor, putative, expressed	gene	receptor protein kinase CLAVATA1 precursor, putative, expressed	chr2	637011	640452	-	promoter
3	LOC_Os04g51930	retrotransposon protein, putative, LINE subclass	gene	retrotransposon protein, putative, LINE subclass	chr4	30626138	30631820	+	promoter
3	LOC_Os11g25150	hypothetical protein	gene	hypothetical protein	chr11	13864472	13864964	-	promoter
3	LOC_Os07g34040	harpin-induced protein 1 domain containing protein, expressed	gene	harpin-induced protein 1 domain containing protein, expressed	chr7	20347676	20348538	+	promoter
3	LOC_Os02g53890	hypothetical protein	gene	hypothetical protein	chr2	32989888	32990268	+	promoter
3	LOC_Os01g56340	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr1	32465448	32468218	-	promoter
3	LOC_Os03g13960	expressed protein	gene	expressed protein	chr3	7574047	7576366	-	promoter
3	LOC_Os11g37110	conserved hypothetical protein	gene	conserved hypothetical protein	chr11	21443513	21444742	-	promoter
3	LOC_Os11g34824	expressed protein	gene	expressed protein	chr11	19936809	19939403	+	promoter
3	LOC_Os10g37530	mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	gene	mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	chr10	20023987	20025017	-	promoter
3	LOC_Os09g31050	cytosolic phospholipase A2 beta, putative, expressed	gene	cytosolic phospholipase A2 beta, putative, expressed	chr9	18672329	18673856	-	promoter
3	LOC_Os07g01960	hypothetical protein	gene	hypothetical protein	chr7	586602	587138	-	promoter,downstream
3	LOC_Os06g03810	expressed protein	gene	expressed protein	chr6	1525537	1526626	-	promoter
3	LOC_Os04g46894	beige/BEACH domain containing protein, expressed	gene	beige/BEACH domain containing protein, expressed	chr4	27614514	27630300	-	promoter
3	LOC_Os05g43670	IQ calmodulin-binding motif family protein, putative, expressed	gene	IQ calmodulin-binding motif family protein, putative, expressed	chr5	25328153	25329942	-	promoter,downstream
3	LOC_Os02g02370	myb-like DNA-binding domain containing protein, putative	gene	myb-like DNA-binding domain containing protein, putative	chr2	789597	791081	-	promoter
3	LOC_Os01g56570	xylosyltransferase, putative, expressed	gene	xylosyltransferase, putative, expressed	chr1	32610362	32612156	-	promoter
3	LOC_Os12g03760	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr12	1527561	1531654	-	promoter
3	LOC_Os10g18899	unknown	gene	unknown	chr10	9558517	9558717	-	promoter
3	LOC_Os08g34960	MYB family transcription factor, putative	gene	MYB family transcription factor, putative	chr8	22009904	22010506	+	promoter
3	LOC_Os01g07880	transcription factor HY5, putative, expressed	gene	transcription factor HY5, putative, expressed	chr1	3810149	3811069	-	promoter
3	LOC_Os01g07550	hypothetical protein	gene	hypothetical protein	chr1	3615498	3618216	-	promoter
3	LOC_Os05g01280	expressed protein	gene	expressed protein	chr5	189641	191128	+	promoter
3	LOC_Os07g47830	pectinesterase, putative, expressed	gene	pectinesterase, putative, expressed	chr7	28557628	28561969	-	promoter
3	LOC_Os02g34870	expressed protein	gene	expressed protein	chr2	20913392	20914524	-	promoter,downstream
3	LOC_Os02g03480	THION24 - Plant thionin family protein precursor, expressed	gene	THION24 - Plant thionin family protein precursor, expressed	chr2	1416610	1417720	+	promoter
3	LOC_Os08g43760	carrier, putative, expressed	gene	carrier, putative, expressed	chr8	27642494	27643539	+	promoter,downstream
3	LOC_Os01g64100	glycosyl hydrolase, putative, expressed	gene	glycosyl hydrolase, putative, expressed	chr1	37234738	37236314	+	promoter
3	LOC_Os06g40070	NADP-dependent oxidoreductase, putative, expressed	gene	NADP-dependent oxidoreductase, putative, expressed	chr6	23846496	23850045	-	promoter
3	LOC_Os06g12050	mTERF family protein, expressed	gene	mTERF family protein, expressed	chr6	6457284	6458568	-	promoter,downstream
3	LOC_Os02g48820	plastocyanin-like domain containing protein, putative, expressed	gene	plastocyanin-like domain containing protein, putative, expressed	chr2	29869694	29870836	-	promoter
3	LOC_Os06g12100	mTERF family protein, expressed	gene	mTERF family protein, expressed	chr6	6478284	6479981	-	promoter
3	LOC_Os03g55450	expressed protein	gene	expressed protein	chr3	31535823	31537531	-	promoter
3	LOC_Os11g10690	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr11	5859170	5863924	-	promoter
3	LOC_Os10g17520	expressed protein	gene	expressed protein	chr10	8765959	8767010	-	promoter
3	LOC_Os01g01925	expressed protein	gene	expressed protein	chr1	506270	508225	+	promoter
3	LOC_Os03g56670	photosystem I reaction center subunit III, chloroplast precursor, putative, expressed	gene	photosystem I reaction center subunit III, chloroplast precursor, putative, expressed	chr3	32265802	32267046	-	promoter
3	LOC_Os12g35395	expressed protein	gene	expressed protein	chr12	21493324	21494558	-	promoter
3	LOC_Os01g59950	pentatricopeptide repeat-containing protein, putative, expressed	gene	pentatricopeptide repeat-containing protein, putative, expressed	chr1	34662955	34663859	-	promoter
3	LOC_Os08g03850	hypothetical protein	gene	hypothetical protein	chr8	1837519	1838045	+	promoter
3	LOC_Os02g43360	cytochrome b5-like Heme/Steroid binding domain containing protein, expressed	gene	cytochrome b5-like Heme/Steroid binding domain containing protein, expressed	chr2	26157190	26158352	-	promoter
3	LOC_Os07g10500	cytochrome b-c1 complex subunit 7, putative	gene	cytochrome b-c1 complex subunit 7, putative	chr7	5654118	5655974	+	promoter,downstream
3	LOC_Os07g49400	OsAPx2 - Cytosolic Ascorbate Peroxidase encoding gene 4,5,6,8, expressed	gene	OsAPx2 - Cytosolic Ascorbate Peroxidase encoding gene 4,5,6,8, expressed	chr7	29582725	29585505	-	promoter
3	LOC_Os04g01140	cytochrome P450 93A2, putative, expressed	gene	cytochrome P450 93A2, putative, expressed	chr4	98618	100643	-	promoter
3	LOC_Os07g04720	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	2093391	2094403	+	promoter
3	LOC_Os04g33290	cysteine protease, putative	gene	cysteine protease, putative	chr4	19962809	19963961	+	promoter
3	LOC_Os07g45980	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr7	27439329	27439718	+	promoter
3	LOC_Os06g30760	transposon protein, putative, CACTA, En/Spm sub-class	gene	transposon protein, putative, CACTA, En/Spm sub-class	chr6	17840562	17843200	+	promoter
3	LOC_Os07g07290	expressed protein	gene	expressed protein	chr7	3617327	3618315	-	promoter
3	LOC_Os02g09930	CSLA1 - cellulose synthase-like family A; mannan synthase, expressed	gene	CSLA1 - cellulose synthase-like family A; mannan synthase, expressed	chr2	5151780	5158914	-	promoter
3	LOC_Os11g37550	OsCML6 - Calmodulin-related calcium sensor protein	gene	OsCML6 - Calmodulin-related calcium sensor protein	chr11	21707347	21708627	-	promoter,downstream
3	LOC_Os05g02754	expressed protein	gene	expressed protein	chr5	989381	991250	-	promoter
3	LOC_Os09g14614	serine/arginine repetitive matrix protein 1, putative, expressed	gene	serine/arginine repetitive matrix protein 1, putative, expressed	chr9	8664791	8666872	-	promoter
3	LOC_Os09g08690	hypothetical protein	gene	hypothetical protein	chr9	4568163	4568663	+	promoter
3	LOC_Os07g14840	hypothetical protein	gene	hypothetical protein	chr7	8482762	8483366	+	promoter
3	LOC_Os01g01580	expressed protein	gene	expressed protein	chr1	291844	292535	+	promoter
3	LOC_Os02g51460	mTERF family protein, expressed	gene	mTERF family protein, expressed	chr2	31517549	31519103	+	promoter
3	LOC_Os05g45500	expressed protein	gene	expressed protein	chr5	26322158	26323079	-	promoter,downstream
3	LOC_Os01g40660	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr1	22985704	22986737	+	promoter
3	LOC_Os06g12040	mTERF family protein, expressed	gene	mTERF family protein, expressed	chr6	6451738	6453455	-	promoter
3	LOC_Os05g48300	purine permease, putative, expressed	gene	purine permease, putative, expressed	chr5	27627359	27628796	-	promoter
3	LOC_Os05g11720	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr5	6652701	6656324	-	promoter,downstream
3	LOC_Os06g17960	hypothetical protein	gene	hypothetical protein	chr6	10441638	10442048	-	promoter
3	LOC_Os08g38790	conserved hypothetical protein	gene	conserved hypothetical protein	chr8	24518096	24520345	-	promoter
3	LOC_Os02g37030	protein binding protein, putative, expressed	gene	protein binding protein, putative, expressed	chr2	22359386	22361464	-	promoter
3	LOC_Os10g32070	GATA zinc finger domain containing protein	gene	GATA zinc finger domain containing protein	chr10	16776177	16777923	-	promoter
3	LOC_Os06g10450	expressed protein	gene	expressed protein	chr6	5373770	5375783	+	promoter
3	LOC_Os04g42940	expressed protein	gene	expressed protein	chr4	25215117	25216388	-	promoter
3	LOC_Os12g07990	protein kinase family protein, putative	gene	protein kinase family protein, putative	chr12	4055055	4057952	-	promoter
3	LOC_Os03g10880	BTBN5 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed	gene	BTBN5 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed	chr3	5588561	5591525	-	promoter
3	LOC_Os04g35670	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr4	21566750	21567757	+	promoter
3	LOC_Os10g08760	hypothetical protein	gene	hypothetical protein	chr10	4764818	4765090	-	promoter
3	LOC_Os12g23100	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr12	13057852	13062337	+	promoter
3	LOC_Os09g19860	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr9	11885659	11888103	+	promoter
3	LOC_Os01g67110	expressed protein	gene	expressed protein	chr1	38958281	38959192	-	promoter,downstream
3	LOC_Os07g38170	remorin, putative, expressed	gene	remorin, putative, expressed	chr7	22888241	22889946	-	promoter
3	LOC_Os10g33886	hypothetical protein	gene	hypothetical protein	chr10	17914232	17914641	+	promoter
3	LOC_Os03g14700	C2 domain containing protein	gene	C2 domain containing protein	chr3	7988802	7993617	-	promoter
3	LOC_Os02g31300	UBX domain containing protein	gene	UBX domain containing protein	chr2	18772740	18773441	-	promoter
3	LOC_Os05g48070	expressed protein	gene	expressed protein	chr5	27496100	27500383	+	promoter
3	LOC_Os01g01810	hypothetical protein	gene	hypothetical protein	chr1	431435	431752	-	promoter,downstream
3	LOC_Os03g59030	UDP-rhamnose rhamnosyltransferase, putative, expressed	gene	UDP-rhamnose rhamnosyltransferase, putative, expressed	chr3	33591925	33593713	-	promoter
3	LOC_Os03g63480	ankyrin repeat domain containing protein, expressed	gene	ankyrin repeat domain containing protein, expressed	chr3	35854387	35857046	+	promoter
3	LOC_Os03g06480	expressed protein	gene	expressed protein	chr3	3240659	3241742	-	promoter
3	LOC_Os12g42240	hypothetical protein	gene	hypothetical protein	chr12	26170159	26170515	+	promoter
3	LOC_Os12g21760	RALFL25 - Rapid ALkalinization Factor RALF family protein precursor, putative	gene	RALFL25 - Rapid ALkalinization Factor RALF family protein precursor, putative	chr12	12241473	12241688	+	promoter
3	LOC_Os02g10450	expressed protein	gene	expressed protein	chr2	5490496	5491873	-	promoter
3	LOC_Os03g11450	expressed protein	gene	expressed protein	chr3	5899087	5901461	+	promoter,downstream
3	LOC_Os11g03980	OsCML2 - Calmodulin-related calcium sensor protein	gene	OsCML2 - Calmodulin-related calcium sensor protein	chr11	1608281	1609132	-	promoter,downstream
3	LOC_Os03g01500	hypothetical protein	gene	hypothetical protein	chr3	323858	324980	-	promoter
3	LOC_Os07g35350	glucan endo-1,3-beta-glucosidase precursor, putative, expressed	gene	glucan endo-1,3-beta-glucosidase precursor, putative, expressed	chr7	21149018	21151336	-	promoter
3	LOC_Os03g63540	lysine-rich arabinogalactan protein 19 precursor, putative, expressed	gene	lysine-rich arabinogalactan protein 19 precursor, putative, expressed	chr3	35888283	35889672	-	promoter,downstream
3	LOC_Os03g15800	B4-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed	gene	B4-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed	chr3	8717048	8718808	-	promoter,downstream
3	LOC_Os06g43130	tic21, putative, expressed	gene	tic21, putative, expressed	chr6	25927017	25929637	-	promoter
3	LOC_Os01g16610	plastocyanin-like domain containing protein, putative	gene	plastocyanin-like domain containing protein, putative	chr1	9428931	9429723	-	promoter,downstream
3	LOC_Os02g18640	OsFBX45 - F-box domain containing protein, expressed	gene	OsFBX45 - F-box domain containing protein, expressed	chr2	10861333	10862860	-	promoter
3	LOC_Os01g47610	lipase class 3 family protein, putative, expressed	gene	lipase class 3 family protein, putative, expressed	chr1	27239074	27241466	-	promoter,downstream
3	LOC_Os04g44340	expressed protein	gene	expressed protein	chr4	26072829	26074706	-	promoter
3	LOC_Os09g22460	OsFBX328 - F-box domain containing protein	gene	OsFBX328 - F-box domain containing protein	chr9	13562564	13563715	-	promoter
3	LOC_Os03g03990	signal recognition particle 43 kDa protein, chloroplast precursor, putative, expressed	gene	signal recognition particle 43 kDa protein, chloroplast precursor, putative, expressed	chr3	1816492	1817851	-	promoter
3	LOC_Os02g55480	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr2	33969953	33972507	+	promoter
3	LOC_Os06g03514	expressed protein	gene	expressed protein	chr6	1353175	1358049	+	promoter
3	LOC_Os07g02260	expressed protein	gene	expressed protein	chr7	725606	726559	+	promoter
3	LOC_Os01g41000	ZCW7, putative, expressed	gene	ZCW7, putative, expressed	chr1	23213578	23214253	-	promoter
3	LOC_Os01g09270	hypothetical protein	gene	hypothetical protein	chr1	4712523	4712924	+	promoter,downstream
3	LOC_Os05g24890	tetratricopeptide-like helical, putative, expressed	gene	tetratricopeptide-like helical, putative, expressed	chr5	14356951	14358910	+	promoter
3	LOC_Os03g25120	HSF-type DNA-binding domain containing protein, expressed	gene	HSF-type DNA-binding domain containing protein, expressed	chr3	14341368	14344264	-	promoter
3	LOC_Os01g06540	PHD finger protein, putative	gene	PHD finger protein, putative	chr1	3082395	3083568	-	promoter,downstream
3	LOC_Os06g08550	BTBN14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed	gene	BTBN14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed	chr6	4228185	4232158	-	promoter
3	LOC_Os05g36186	hypothetical protein	gene	hypothetical protein	chr5	21393783	21394562	-	promoter
3	LOC_Os08g17650	LYR motif containing protein, putative, expressed	gene	LYR motif containing protein, putative, expressed	chr8	10794827	10802847	-	promoter
3	LOC_Os02g25610	hypothetical protein	gene	hypothetical protein	chr2	14963613	14964396	-	promoter,downstream
3	LOC_Os04g36600	DUF538 domain containing protein, putative, expressed	gene	DUF538 domain containing protein, putative, expressed	chr4	21925206	21926091	-	promoter
3	LOC_Os01g07110	BRCA2 repeat family protein, expressed	gene	BRCA2 repeat family protein, expressed	chr1	3344203	3354066	-	promoter
3	LOC_Os07g35600	expressed protein	gene	expressed protein	chr7	21298636	21310346	-	promoter
3	LOC_Os09g09790	Fe-S metabolism associated domain containing protein, expressed	gene	Fe-S metabolism associated domain containing protein, expressed	chr9	5305896	5308061	-	promoter
3	LOC_Os01g09770	expressed protein	gene	expressed protein	chr1	5036238	5039698	-	promoter
3	LOC_Os03g48400	hypothetical protein	gene	hypothetical protein	chr3	27548858	27550118	-	promoter
3	LOC_Os03g63880	hypothetical protein	gene	hypothetical protein	chr3	36090089	36091176	-	promoter
3	LOC_Os10g34550	hypothetical protein	gene	hypothetical protein	chr10	18354686	18356152	-	promoter
3	LOC_Os01g64949	expressed protein	gene	expressed protein	chr1	37694034	37695442	-	promoter
3	LOC_Os04g57030	VQ domain containing protein, putative	gene	VQ domain containing protein, putative	chr4	33804980	33805435	-	promoter
3	LOC_Os01g52880	leucine-rich repeat family protein, putative, expressed	gene	leucine-rich repeat family protein, putative, expressed	chr1	30405992	30407510	+	promoter
3	LOC_Os04g44650	ferredoxin-thioredoxin reductase, variable chain, putative, expressed	gene	ferredoxin-thioredoxin reductase, variable chain, putative, expressed	chr4	26246251	26247121	-	promoter
3	LOC_Os11g38590	hypothetical protein	gene	hypothetical protein	chr11	22403509	22404069	-	promoter
3	LOC_Os07g38740	hypothetical protein	gene	hypothetical protein	chr7	23247358	23247585	-	promoter
3	LOC_Os11g01290	hypothetical protein	gene	hypothetical protein	chr11	155018	157032	+	promoter
3	LOC_Os04g42900	expressed protein	gene	expressed protein	chr4	25196579	25199808	-	promoter
3	LOC_Os03g10550	hypothetical protein	gene	hypothetical protein	chr3	5379302	5380176	-	promoter
3	LOC_Os02g37094	expressed protein	gene	expressed protein	chr2	22423353	22424193	-	promoter
3	LOC_Os03g61840	hypothetical protein	gene	hypothetical protein	chr3	35049635	35051452	-	promoter
3	LOC_Os01g70450	hypothetical protein	gene	hypothetical protein	chr1	40801603	40803608	+	promoter
3	LOC_Os02g12140	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr2	6314997	6318062	-	promoter
3	LOC_Os04g49350	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr4	29270727	29272993	+	promoter
3	LOC_Os05g30990	zinc finger protein, putative	gene	zinc finger protein, putative	chr5	17943392	17946585	-	promoter
3	LOC_Os01g15860	pre-mRNA-processing factor 6, putative, expressed	gene	pre-mRNA-processing factor 6, putative, expressed	chr1	8930593	8935683	+	promoter
3	LOC_Os07g07300	expressed protein	gene	expressed protein	chr7	3619110	3629821	-	promoter
3	LOC_Os02g47230	Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed	gene	Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed	chr2	28820839	28827763	-	promoter
3	LOC_Os11g07900	hypothetical protein	gene	hypothetical protein	chr11	4067836	4070066	-	promoter
3	LOC_Os01g29507	retrotransposon, putative, centromere-specific	gene	retrotransposon, putative, centromere-specific	chr1	16539152	16544887	+	promoter
3	LOC_Os07g02970	expressed protein	gene	expressed protein	chr7	1105836	1107834	+	promoter,downstream
3	LOC_Os12g04660	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr12	1972804	1973670	-	promoter
3	LOC_Os08g45100	conserved hypothetical protein	gene	conserved hypothetical protein	chr8	28314000	28314927	-	promoter
3	LOC_Os08g01670	invertase/pectin methylesterase inhibitor family protein, putative, expressed	gene	invertase/pectin methylesterase inhibitor family protein, putative, expressed	chr8	388662	390196	-	promoter
3	LOC_Os01g67490	OTU-like cysteine protease family protein, putative, expressed	gene	OTU-like cysteine protease family protein, putative, expressed	chr1	39215536	39218413	-	promoter
3	LOC_Os02g58100	expressed protein	gene	expressed protein	chr2	35553789	35555724	+	promoter
3	LOC_Os05g44600	pectinesterase, putative, expressed	gene	pectinesterase, putative, expressed	chr5	25886529	25889623	+	promoter
3	LOC_Os03g25760	calmodulin-binding protein, putative, expressed	gene	calmodulin-binding protein, putative, expressed	chr3	14737587	14740586	-	promoter
3	LOC_Os11g07911	expressed protein	gene	expressed protein	chr11	4079933	4080633	+	promoter
3	LOC_Os04g30220	hypothetical protein	gene	hypothetical protein	chr4	17860118	17860495	+	promoter
3	LOC_Os08g05900	hypothetical protein	gene	hypothetical protein	chr8	3174637	3175005	-	promoter
3	LOC_Os07g19550	expressed protein	gene	expressed protein	chr7	11584106	11584600	-	promoter
3	LOC_Os12g03700	expressed protein	gene	expressed protein	chr12	1493517	1494560	-	promoter
3	LOC_Os04g44190	expressed protein	gene	expressed protein	chr4	25973719	25981655	+	promoter
3	LOC_Os05g08460	OsFBX164 - F-box domain containing protein, expressed	gene	OsFBX164 - F-box domain containing protein, expressed	chr5	4621538	4623022	-	promoter
3	LOC_Os01g67229	unknown	gene	unknown	chr1	39010454	39010915	-	promoter
3	LOC_Os01g29840	no apical meristem protein, putative, expressed	gene	no apical meristem protein, putative, expressed	chr1	16719478	16721591	-	promoter
3	LOC_Os02g47660	basic helix-loop-helix, putative, expressed	gene	basic helix-loop-helix, putative, expressed	chr2	29110756	29113535	-	promoter
3	LOC_Os01g04170	expressed protein	gene	expressed protein	chr1	1837170	1838194	-	promoter
3	LOC_Os04g45180	EF hand family protein, expressed	gene	EF hand family protein, expressed	chr4	26524140	26527388	+	promoter,downstream
3	LOC_Os02g17200	hypothetical protein	gene	hypothetical protein	chr2	9853307	9854419	-	promoter
3	LOC_Os06g49070	expressed protein	gene	expressed protein	chr6	29736486	29737309	-	promoter
3	LOC_Os03g55960	EF hand family protein, putative, expressed	gene	EF hand family protein, putative, expressed	chr3	31851377	31852331	-	promoter,downstream
3	LOC_Os03g60120	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr3	34185287	34186520	-	promoter,downstream
3	LOC_Os01g48940	hypothetical protein	gene	hypothetical protein	chr1	28083217	28085365	-	promoter
3	LOC_Os03g06840	GRF zinc finger family protein, expressed	gene	GRF zinc finger family protein, expressed	chr3	3467233	3468139	-	promoter,downstream
3	LOC_Os07g13780	cytokinin-O-glucosyltransferase 2, putative, expressed	gene	cytokinin-O-glucosyltransferase 2, putative, expressed	chr7	7902789	7903385	+	promoter
3	LOC_Os01g13710	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr1	7671983	7675403	+	promoter,downstream
3	LOC_Os07g42900	helicase domain-containing protein, putative, expressed	gene	helicase domain-containing protein, putative, expressed	chr7	25682279	25687021	-	promoter
3	LOC_Os03g22910	hypothetical protein	gene	hypothetical protein	chr3	13248182	13248539	-	promoter
3	LOC_Os03g08284	expressed protein	gene	expressed protein	chr3	4215698	4218067	-	promoter
3	LOC_Os05g36080	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr5	21315363	21320149	+	promoter
3	LOC_Os12g06030	OsFBX439 - F-box domain containing protein, expressed	gene	OsFBX439 - F-box domain containing protein, expressed	chr12	2783264	2784442	-	promoter
3	LOC_Os02g02510	DNA-directed RNA polymerase II subunit RPB4, putative, expressed	gene	DNA-directed RNA polymerase II subunit RPB4, putative, expressed	chr2	894656	895733	-	promoter
3	LOC_Os02g28470	transferase family protein, putative, expressed	gene	transferase family protein, putative, expressed	chr2	16829185	16830649	+	promoter
3	LOC_Os12g04300	sulfotransferase domain containing protein	gene	sulfotransferase domain containing protein	chr12	1821392	1822197	-	promoter
3	LOC_Os07g45300	tim44-like domain containing protein	gene	tim44-like domain containing protein	chr7	27029240	27034099	-	promoter
3	LOC_Os04g40410	high affinity nitrate transporter, putative, expressed	gene	high affinity nitrate transporter, putative, expressed	chr4	23833147	23834314	-	promoter
3	LOC_Os04g47820	expressed protein	gene	expressed protein	chr4	28191246	28191611	-	promoter
3	LOC_Os04g12990	OsFBX122 - F-box domain containing protein	gene	OsFBX122 - F-box domain containing protein	chr4	7162129	7163723	-	promoter
3	LOC_Os03g05460	expressed protein	gene	expressed protein	chr3	2697769	2699406	-	promoter
3	LOC_Os05g45740	mitochondrial ATP synthase g subunit family protein, putative, expressed	gene	mitochondrial ATP synthase g subunit family protein, putative, expressed	chr5	26435065	26436998	+	promoter,downstream
3	LOC_Os02g52170	expressed protein	gene	expressed protein	chr2	31926414	31927447	-	promoter
3	LOC_Os11g39630	ZOS11-08 - C2H2 zinc finger protein, expressed	gene	ZOS11-08 - C2H2 zinc finger protein, expressed	chr11	23134850	23137529	-	promoter
3	LOC_Os02g39210	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	23677452	23678525	+	promoter
3	LOC_Os01g44240	zinc finger, C3HC4 type domain containing protein	gene	zinc finger, C3HC4 type domain containing protein	chr1	25366401	25366856	+	promoter
3	LOC_Os07g32910	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr7	19673075	19679440	-	promoter
3	LOC_Os07g07350	zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed	gene	zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed	chr7	3674966	3677412	-	promoter
3	LOC_Os02g20290	hypothetical protein	gene	hypothetical protein	chr2	11950752	11953945	-	promoter
3	LOC_Os12g03094	expressed protein	gene	expressed protein	chr12	1169641	1171382	+	promoter,downstream
3	LOC_Os06g03590	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr6	1386981	1387505	+	promoter,downstream
3	LOC_Os10g39880	photosynthetic reaction center protein, putative	gene	photosynthetic reaction center protein, putative	chr10	21263132	21264305	+	promoter
3	LOC_Os03g38800	AAA family ATPase, putative, expressed	gene	AAA family ATPase, putative, expressed	chr3	21543311	21545300	-	promoter
3	LOC_Os12g30600	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr12	18346327	18353859	-	promoter
3	LOC_Os10g35580	ATEB1A-like microtubule associated protein, putative, expressed	gene	ATEB1A-like microtubule associated protein, putative, expressed	chr10	18962442	18964878	-	promoter
3	LOC_Os12g01690	prenylated rab acceptor, putative	gene	prenylated rab acceptor, putative	chr12	413959	414621	+	promoter
3	LOC_Os02g12620	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr2	6588391	6590160	+	promoter
3	LOC_Os04g33200	heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed	gene	heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed	chr4	19911952	19919857	-	promoter
3	LOC_Os07g43020	TRM112, putative, expressed	gene	TRM112, putative, expressed	chr7	25773442	25774346	-	promoter,downstream
3	LOC_Os03g14915	expressed protein	gene	expressed protein	chr3	8131470	8133165	+	promoter
3	LOC_Os04g40190	circumsporozoite protein, putative, expressed	gene	circumsporozoite protein, putative, expressed	chr4	23730588	23731875	-	promoter
3	LOC_Os06g06670	expressed protein	gene	expressed protein	chr6	3130222	3133227	+	promoter
3	LOC_Os07g38570	expressed protein	gene	expressed protein	chr7	23164687	23165404	+	promoter
3	LOC_Os03g63740	NFD2, putative, expressed	gene	NFD2, putative, expressed	chr3	35978862	35979831	-	promoter
3	LOC_Os03g32150	hypothetical protein	gene	hypothetical protein	chr3	18389817	18390914	-	promoter,downstream
3	LOC_Os06g39050	syntaxin, putative, expressed	gene	syntaxin, putative, expressed	chr6	23184060	23185299	+	promoter
3	LOC_Os04g51290	expressed protein	gene	expressed protein	chr4	30195416	30199605	+	promoter
3	LOC_Os04g47130	expressed protein	gene	expressed protein	chr4	27805720	27807251	-	promoter
3	LOC_Os05g43050	conserved hypothetical protein	gene	conserved hypothetical protein	chr5	24937707	24938908	-	promoter
3	LOC_Os08g37620	hypothetical protein	gene	hypothetical protein	chr8	23842273	23842694	-	promoter
3	LOC_Os04g37480	oxidoreductase, aldo/keto reductase family protein, putative, expressed	gene	oxidoreductase, aldo/keto reductase family protein, putative, expressed	chr4	22136071	22138441	+	promoter
3	LOC_Os03g27980	glucan endo-1,3-beta-glucosidase precursor, putative, expressed	gene	glucan endo-1,3-beta-glucosidase precursor, putative, expressed	chr3	16069652	16071427	+	promoter,downstream
3	LOC_Os05g38230	oxidoreductase, aldo/keto reductase family protein, putative, expressed	gene	oxidoreductase, aldo/keto reductase family protein, putative, expressed	chr5	22347346	22350844	-	promoter
3	LOC_Os01g56010	serpin domain containing protein, putative, expressed	gene	serpin domain containing protein, putative, expressed	chr1	32248927	32250581	-	promoter
3	LOC_Os11g05860	harpin-induced protein 1 domain containing protein, expressed	gene	harpin-induced protein 1 domain containing protein, expressed	chr11	2734293	2735371	-	promoter
3	LOC_Os07g46420	expressed protein	gene	expressed protein	chr7	27698939	27700414	+	promoter,downstream
3	LOC_Os11g03140	hypothetical protein	gene	hypothetical protein	chr11	1130699	1131363	-	promoter
3	LOC_Os09g23120	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr9	13671982	13677734	+	promoter
3	LOC_Os11g08380	1-aminocyclopropane-1-carboxylate oxidase, putative, expressed	gene	1-aminocyclopropane-1-carboxylate oxidase, putative, expressed	chr11	4411812	4414337	-	promoter
3	LOC_Os05g48470	hypothetical protein	gene	hypothetical protein	chr5	27723245	27725706	-	promoter
3	LOC_Os02g22660	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr2	13498911	13499570	+	promoter
3	LOC_Os11g42550	dirigent, putative, expressed	gene	dirigent, putative, expressed	chr11	25151546	25152543	+	promoter
3	LOC_Os07g36500	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	gene	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	chr7	21826220	21826874	+	promoter
3	LOC_Os09g36490	expressed protein	gene	expressed protein	chr9	21054103	21055956	+	promoter
3	LOC_Os05g25220	conserved hypothetical protein	gene	conserved hypothetical protein	chr5	14562967	14564995	+	promoter
3	LOC_Os05g39250	phosphatidylethanolamine-binding protein, putative, expressed	gene	phosphatidylethanolamine-binding protein, putative, expressed	chr5	22950944	22951795	-	promoter
3	LOC_Os06g21489	transposon protein, putative, Pong sub-class	gene	transposon protein, putative, Pong sub-class	chr6	12415302	12417472	+	promoter
3	LOC_Os05g25360	hypothetical protein	gene	hypothetical protein	chr5	14665419	14666019	+	promoter
3	LOC_Os04g14730	expressed protein	gene	expressed protein	chr4	8270001	8270456	-	promoter
3	LOC_Os03g07870	expressed protein	gene	expressed protein	chr3	3998084	3999028	-	promoter
3	LOC_Os10g40950	polyol transporter 5, putative, expressed	gene	polyol transporter 5, putative, expressed	chr10	21922621	21923642	+	promoter
3	LOC_Os06g06802	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr6	3203764	3211338	+	promoter
3	LOC_Os11g40210	remorin C-terminal domain containing protein, putative, expressed	gene	remorin C-terminal domain containing protein, putative, expressed	chr11	23517184	23520909	-	promoter
3	LOC_Os06g28639	unknown	gene	unknown	chr6	16307991	16308169	-	promoter
3	LOC_Os01g53760	hypothetical protein	gene	hypothetical protein	chr1	30901700	30902014	-	promoter
3	LOC_Os09g33950	ferredoxin 1-like isoform 1, putative, expressed	gene	ferredoxin 1-like isoform 1, putative, expressed	chr9	20038984	20039920	-	promoter
3	LOC_Os08g40170	cyclin-dependent kinase B2-1, putative, expressed	gene	cyclin-dependent kinase B2-1, putative, expressed	chr8	25417170	25419113	+	promoter
3	LOC_Os03g11080	expressed protein	gene	expressed protein	chr3	5697284	5698187	+	promoter
3	LOC_Os09g34030	expressed protein	gene	expressed protein	chr9	20083937	20084414	+	promoter,downstream
3	LOC_Os11g42010	NBS-LRR type disease resistance protein, putative	gene	NBS-LRR type disease resistance protein, putative	chr11	24797096	24798116	-	promoter
3	LOC_Os03g56810	tubulin/FtsZ domain containing protein, putative, expressed	gene	tubulin/FtsZ domain containing protein, putative, expressed	chr3	32364630	32367782	+	promoter
3	LOC_Os07g16370	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr7	9567419	9572336	-	promoter
3	LOC_Os04g53780	leucoanthocyanidin reductase, putative, expressed	gene	leucoanthocyanidin reductase, putative, expressed	chr4	31863955	31866586	+	promoter
3	LOC_Os05g18970	hypothetical protein	gene	hypothetical protein	chr5	11003618	11006193	-	promoter
3	LOC_Os02g05520	expressed protein	gene	expressed protein	chr2	2668554	2671034	+	promoter,downstream
3	LOC_Os04g58590	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr4	34646931	34652234	-	promoter
3	LOC_Os05g45070	harpin-induced protein 1 domain containing protein, expressed	gene	harpin-induced protein 1 domain containing protein, expressed	chr5	26127010	26127980	-	promoter
3	LOC_Os02g56580	P21-Rho-binding domain containing protein, putative	gene	P21-Rho-binding domain containing protein, putative	chr2	34654229	34655050	+	promoter
3	LOC_Os10g30210	expressed protein	gene	expressed protein	chr10	15626741	15628807	-	promoter
3	LOC_Os04g48416	OsSub45 - Putative Subtilisin homologue, expressed	gene	OsSub45 - Putative Subtilisin homologue, expressed	chr4	28693836	28696166	-	promoter
3	LOC_Os04g37550	aspartic proteinase nepenthesin-2 precursor, putative, expressed	gene	aspartic proteinase nepenthesin-2 precursor, putative, expressed	chr4	22162820	22164682	+	promoter
3	LOC_Os02g39590	GDSL-like lipase/acylhydrolase, putative	gene	GDSL-like lipase/acylhydrolase, putative	chr2	23887389	23888600	-	promoter,downstream
3	LOC_Os05g01810	xylem cysteine proteinase 2 precursor, putative, expressed	gene	xylem cysteine proteinase 2 precursor, putative, expressed	chr5	486053	488406	+	promoter
3	LOC_Os08g38860	hypothetical protein	gene	hypothetical protein	chr8	24563565	24565344	-	promoter
3	LOC_Os03g52400	ribosomal protein L7/L12 C-terminal domain containing protein, expressed	gene	ribosomal protein L7/L12 C-terminal domain containing protein, expressed	chr3	30073610	30074474	-	promoter
3	LOC_Os02g25840	conserved oligomeric Golgi complex component 4, related, putative, expressed	gene	conserved oligomeric Golgi complex component 4, related, putative, expressed	chr2	15135610	15137741	-	promoter
3	LOC_Os01g43639	unknown	gene	unknown	chr1	25003079	25003658	+	promoter
3	LOC_Os07g13180	hypothetical protein	gene	hypothetical protein	chr7	7549496	7552319	-	promoter
3	LOC_Os05g43290	hypothetical protein	gene	hypothetical protein	chr5	25124216	25125156	-	promoter
3	LOC_Os02g56370	OsWAK20 - OsWAK receptor-like protein kinase, expressed	gene	OsWAK20 - OsWAK receptor-like protein kinase, expressed	chr2	34503654	34506805	-	promoter
3	LOC_Os05g44300	plant-specific domain TIGR01615 family protein, expressed	gene	plant-specific domain TIGR01615 family protein, expressed	chr5	25713897	25716014	-	promoter
3	LOC_Os07g05830	zinc-finger protein, putative, expressed	gene	zinc-finger protein, putative, expressed	chr7	2800929	2803210	-	promoter
3	LOC_Os06g07100	RING-H2 finger protein, putative, expressed	gene	RING-H2 finger protein, putative, expressed	chr6	3387145	3389645	-	promoter
3	LOC_Os01g05820	gamma-glutamyltranspeptidase 1 precursor, putative, expressed	gene	gamma-glutamyltranspeptidase 1 precursor, putative, expressed	chr1	2782189	2789454	+	promoter
3	LOC_Os10g11090	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr10	6151386	6153128	+	promoter
3	LOC_Os06g44240	gp176, putative	gene	gp176, putative	chr6	26689717	26691642	+	promoter
3	LOC_Os01g73540	YGGT family protein, putative, expressed	gene	YGGT family protein, putative, expressed	chr1	42612719	42613597	-	promoter
3	LOC_Os04g44900	lectin-like receptor kinase, putative, expressed	gene	lectin-like receptor kinase, putative, expressed	chr4	26387573	26390130	-	promoter
3	LOC_Os02g04030	phosphatidylinositol transfer, putative, expressed	gene	phosphatidylinositol transfer, putative, expressed	chr2	1748459	1753303	-	promoter,downstream
3	LOC_Os02g19980	hypothetical protein	gene	hypothetical protein	chr2	11755497	11757579	+	promoter
3	LOC_Os01g40290	expressed protein	gene	expressed protein	chr1	22746292	22747099	+	promoter
3	LOC_Os08g42198	auxin responsive protein, putative, expressed	gene	auxin responsive protein, putative, expressed	chr8	26653505	26654126	-	promoter
3	LOC_Os02g47370	transcription factor TF2, putative, expressed	gene	transcription factor TF2, putative, expressed	chr2	28915307	28915926	-	promoter
3	LOC_Os07g15130	hypothetical protein	gene	hypothetical protein	chr7	8680599	8681833	+	promoter
3	LOC_Os01g38520	expressed protein	gene	expressed protein	chr1	21632927	21634409	+	promoter,downstream
3	LOC_Os06g20330	expressed protein	gene	expressed protein	chr6	11681267	11682206	-	promoter,downstream
3	LOC_Os11g09180	expressed protein	gene	expressed protein	chr11	4919650	4921450	-	promoter
3	LOC_Os09g25945	expressed protein	gene	expressed protein	chr9	15580064	15581820	-	promoter
3	LOC_Os05g23890	retrotransposon protein, putative, LINE subclass	gene	retrotransposon protein, putative, LINE subclass	chr5	13683134	13685097	+	promoter
3	LOC_Os01g11080	transposable element protein, putative, containing Pfam profile: PF03732, Retrotrans_gag	gene	transposable element protein, putative, containing Pfam profile: PF03732, Retrotrans_gag	chr1	5917163	5918212	+	promoter
3	LOC_Os03g12380	expressed protein	gene	expressed protein	chr3	6540560	6540988	-	promoter
3	LOC_Os12g07030	expressed protein	gene	expressed protein	chr12	3436307	3439087	-	promoter
3	LOC_Os07g42828	unknown	gene	unknown	chr7	25651217	25651327	+	promoter
3	LOC_Os07g44010	expressed protein	gene	expressed protein	chr7	26306954	26307536	+	promoter
3	LOC_Os01g24890	transposon protein, putative, CACTA, En/Spm sub-class	gene	transposon protein, putative, CACTA, En/Spm sub-class	chr1	14020254	14023132	-	promoter
3	LOC_Os03g57220	hydroxyacid oxidase 1, putative, expressed	gene	hydroxyacid oxidase 1, putative, expressed	chr3	32621399	32625406	+	promoter
3	LOC_Os10g26070	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr10	13430621	13432586	-	promoter
3	LOC_Os04g40990	malate synthase, glyoxysomal, putative, expressed	gene	malate synthase, glyoxysomal, putative, expressed	chr4	24140625	24143115	-	promoter
3	LOC_Os02g48800	PHD finger family protein, putative, expressed	gene	PHD finger family protein, putative, expressed	chr2	29862100	29863561	+	promoter
3	LOC_Os02g08320	haemolysin-III, putative, expressed	gene	haemolysin-III, putative, expressed	chr2	4423143	4424233	+	promoter
3	LOC_Os12g07790	no apical meristem protein, putative	gene	no apical meristem protein, putative	chr12	3935376	3937091	-	promoter,downstream
3	LOC_Os01g18890	peroxidase precursor, putative	gene	peroxidase precursor, putative	chr1	10678464	10681164	-	promoter
3	LOC_Os04g44570	aquaporin protein, putative, expressed	gene	aquaporin protein, putative, expressed	chr4	26195138	26196480	+	promoter
3	LOC_Os07g23730	thaumatin, putative, expressed	gene	thaumatin, putative, expressed	chr7	13387833	13391098	+	promoter
3	LOC_Os01g14880	hypothetical protein	gene	hypothetical protein	chr1	8338182	8338424	-	promoter
3	LOC_Os04g33520	RCLEA6 - Root cap and Late embryogenesis related family protein precursor, expressed	gene	RCLEA6 - Root cap and Late embryogenesis related family protein precursor, expressed	chr4	20108405	20110022	+	promoter
3	LOC_Os05g25860	expressed protein	gene	expressed protein	chr5	14994938	14997114	+	promoter,downstream
3	LOC_Os05g33280	thylakoid lumen protein, putative, expressed	gene	thylakoid lumen protein, putative, expressed	chr5	19444967	19446575	-	promoter,downstream
3	LOC_Os06g46580	conserved hypothetical protein	gene	conserved hypothetical protein	chr6	28279351	28279833	+	promoter,downstream
3	LOC_Os12g44050	purple acid phosphatase precursor, putative, expressed	gene	purple acid phosphatase precursor, putative, expressed	chr12	27282855	27283690	-	promoter
3	LOC_Os02g46920	expressed protein	gene	expressed protein	chr2	28621009	28626527	-	promoter
3	LOC_Os04g43040	expressed protein	gene	expressed protein	chr4	25283445	25286416	-	promoter
3	LOC_Os12g07360	hypothetical protein	gene	hypothetical protein	chr12	3632980	3633929	+	promoter
3	LOC_Os02g29390	hypothetical protein	gene	hypothetical protein	chr2	17450426	17451311	-	promoter
3	LOC_Os01g15800	conserved hypothetical protein	gene	conserved hypothetical protein	chr1	8899946	8900945	+	promoter
3	LOC_Os01g17080	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr1	9822075	9824946	-	promoter
3	LOC_Os07g47540	DUF567 domain containing protein, putative, expressed	gene	DUF567 domain containing protein, putative, expressed	chr7	28434824	28436597	-	promoter
3	LOC_Os01g50330	strictosidine synthase 1 precursor, putative, expressed	gene	strictosidine synthase 1 precursor, putative, expressed	chr1	28890148	28891167	-	promoter
3	LOC_Os01g41939	unknown	gene	unknown	chr1	23780304	23781331	+	promoter
3	LOC_Os10g27280	thaumatin, putative, expressed	gene	thaumatin, putative, expressed	chr10	14327774	14329461	-	promoter
3	LOC_Os04g34220	conserved hypothetical protein	gene	conserved hypothetical protein	chr4	20556860	20558095	-	promoter
3	LOC_Os04g37930	hypothetical protein	gene	hypothetical protein	chr4	22370642	22374508	-	promoter
3	LOC_Os02g20340	hypothetical protein	gene	hypothetical protein	chr2	11977068	11980261	-	promoter
3	LOC_Os02g03570	hsp20/alpha crystallin family protein, putative, expressed	gene	hsp20/alpha crystallin family protein, putative, expressed	chr2	1450163	1450996	+	promoter
3	LOC_Os09g23730	HMG-Y-related protein A, putative, expressed	gene	HMG-Y-related protein A, putative, expressed	chr9	14105176	14106336	-	promoter
3	LOC_Os12g27840	expressed protein	gene	expressed protein	chr12	16403568	16403946	+	promoter
3	LOC_Os03g06390	expressed protein	gene	expressed protein	chr3	3193986	3195657	-	promoter
3	LOC_Os02g55040	expressed protein	gene	expressed protein	chr2	33714530	33715979	+	promoter
3	LOC_Os05g03030	50S ribosomal protein L10, chloroplast precursor, putative, expressed	gene	50S ribosomal protein L10, chloroplast precursor, putative, expressed	chr5	1146173	1147090	-	promoter
3	LOC_Os07g37150	expressed protein	gene	expressed protein	chr7	22252784	22255736	+	promoter
3	LOC_Os07g29230	LTPL63 - Protease inhibitor/seed storage/LTP family protein precursor, putative	gene	LTPL63 - Protease inhibitor/seed storage/LTP family protein precursor, putative	chr7	17130067	17131372	+	promoter
3	LOC_Os06g28840	expressed protein	gene	expressed protein	chr6	16439847	16443416	-	promoter
3	LOC_Os10g22180	hypothetical protein	gene	hypothetical protein	chr10	11392835	11394434	-	promoter
3	LOC_Os08g42770	hypothetical protein	gene	hypothetical protein	chr8	27066001	27066798	+	promoter
3	LOC_Os08g13219	conserved hypothetical protein	gene	conserved hypothetical protein	chr8	7860055	7860725	+	promoter
3	LOC_Os02g56310	calcium-dependent protein kinase isoform AK1, putative, expressed	gene	calcium-dependent protein kinase isoform AK1, putative, expressed	chr2	34462883	34465156	-	promoter
3	LOC_Os07g38010	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	22801556	22801888	-	promoter
3	LOC_Os08g43740	expressed protein	gene	expressed protein	chr8	27637372	27638754	+	promoter
3	LOC_Os09g32964	peroxidase precursor, putative, expressed	gene	peroxidase precursor, putative, expressed	chr9	19674156	19676631	-	promoter
3	LOC_Os04g49950	OsFBX150 - F-box domain containing protein, expressed	gene	OsFBX150 - F-box domain containing protein, expressed	chr4	29605802	29612232	-	promoter
3	LOC_Os09g27430	hypothetical protein	gene	hypothetical protein	chr9	16658578	16659351	+	promoter
3	LOC_Os05g04770	OsFBX158 - F-box domain containing protein	gene	OsFBX158 - F-box domain containing protein	chr5	2258480	2259663	-	promoter
3	LOC_Os08g44780	expressed protein	gene	expressed protein	chr8	28132858	28134557	+	promoter
3	LOC_Os12g32360	expressed protein	gene	expressed protein	chr12	19490206	19492581	-	promoter
3	LOC_Os03g13140	non-symbiotic hemoglobin 2, putative, expressed	gene	non-symbiotic hemoglobin 2, putative, expressed	chr3	7091737	7093013	+	promoter
3	LOC_Os01g27650	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr1	15417885	15420092	-	promoter
3	LOC_Os11g39710	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr11	23185294	23187180	+	promoter
3	LOC_Os03g49132	ZOS3-16 - C2H2 zinc finger protein	gene	ZOS3-16 - C2H2 zinc finger protein	chr3	27980491	27981921	+	promoter,downstream
3	LOC_Os11g11110	expressed protein	gene	expressed protein	chr11	6142551	6144293	-	promoter
3	LOC_Os03g53200	OsCML4 - Calmodulin-related calcium sensor protein, expressed	gene	OsCML4 - Calmodulin-related calcium sensor protein, expressed	chr3	30510425	30513448	+	promoter
3	LOC_Os11g21790	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr11	12035307	12039175	-	promoter
3	LOC_Os03g17460	IN2-1 protein, putative, expressed	gene	IN2-1 protein, putative, expressed	chr3	9707142	9709028	-	promoter
3	LOC_Os08g44110	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr8	27773007	27776629	-	promoter
3	LOC_Os11g01620	inactive receptor kinase At2g26730 precursor, putative, expressed	gene	inactive receptor kinase At2g26730 precursor, putative, expressed	chr11	358127	361653	+	promoter
3	LOC_Os11g02964	FAR1 family protein	gene	FAR1 family protein	chr11	1029410	1037579	+	promoter
3	LOC_Os03g22390	universal stress protein domain containing protein, putative, expressed	gene	universal stress protein domain containing protein, putative, expressed	chr3	12818723	12819716	-	promoter
3	LOC_Os02g32240	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr2	19035360	19035665	-	promoter
3	LOC_Os03g40060	conserved hypothetical protein	gene	conserved hypothetical protein	chr3	22252078	22253394	+	promoter
3	LOC_Os10g40990	flavonol synthase/flavanone 3-hydroxylase, putative, expressed	gene	flavonol synthase/flavanone 3-hydroxylase, putative, expressed	chr10	21941042	21942800	-	promoter,downstream
3	LOC_Os10g35650	expressed protein	gene	expressed protein	chr10	18995321	18996570	+	promoter
3	LOC_Os01g12060	hypothetical protein	gene	hypothetical protein	chr1	6557931	6558377	-	promoter
3	LOC_Os08g33320	expressed protein	gene	expressed protein	chr8	20773383	20779954	-	promoter
3	LOC_Os07g07824	unknown	gene	unknown	chr7	3921852	3925313	-	promoter
3	LOC_Os06g38564	hypothetical protein	gene	hypothetical protein	chr6	22839364	22840687	+	promoter
3	LOC_Os07g01100	legume lectins beta domain containing protein, putative, expressed	gene	legume lectins beta domain containing protein, putative, expressed	chr7	55259	57217	-	promoter
3	LOC_Os03g17750	hypothetical protein	gene	hypothetical protein	chr3	9875939	9876327	-	promoter
3	LOC_Os12g01260	protein transport protein Sec61 subunit beta, putative, expressed	gene	protein transport protein Sec61 subunit beta, putative, expressed	chr12	155368	156071	-	promoter
3	LOC_Os05g33120	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr5	19355674	19358339	-	promoter,downstream
3	LOC_Os07g48420	expressed protein	gene	expressed protein	chr7	28955990	28959836	-	promoter
3	LOC_Os12g08730	thioredoxin, putative, expressed	gene	thioredoxin, putative, expressed	chr12	4460662	4462084	-	promoter
3	LOC_Os01g34590	expressed protein	gene	expressed protein	chr1	19072002	19072845	-	promoter
3	LOC_Os07g37970	cytochrome P450 51, putative	gene	cytochrome P450 51, putative	chr7	22784174	22786372	+	promoter
3	LOC_Os03g12100	retrotransposon, putative, centromere-specific	gene	retrotransposon, putative, centromere-specific	chr3	6351368	6352019	+	promoter
3	LOC_Os01g51310	expressed protein	gene	expressed protein	chr1	29507227	29508390	+	promoter
3	LOC_Os08g42220	hypothetical protein	gene	hypothetical protein	chr8	26662267	26665458	-	promoter
3	LOC_Os10g37290	DEFL6 - Defensin and Defensin-like DEFL family, expressed	gene	DEFL6 - Defensin and Defensin-like DEFL family, expressed	chr10	19900305	19901140	-	promoter
3	LOC_Os05g48330	aspartyl protease family protein, putative, expressed	gene	aspartyl protease family protein, putative, expressed	chr5	27639324	27642899	-	promoter
3	LOC_Os01g14960	expressed protein	gene	expressed protein	chr1	8386587	8387859	-	promoter
3	LOC_Os06g01340	CCT/B-box zinc finger protein, putative	gene	CCT/B-box zinc finger protein, putative	chr6	208204	209107	+	promoter
3	LOC_Os03g17580	ribosomal protein L10, putative, expressed	gene	ribosomal protein L10, putative, expressed	chr3	9780370	9781526	-	promoter,downstream
3	LOC_Os01g65590	galactosyltransferase, putative, expressed	gene	galactosyltransferase, putative, expressed	chr1	38071047	38073819	+	promoter
3	LOC_Os04g34010	aluminum-activated malate transporter, putative, expressed	gene	aluminum-activated malate transporter, putative, expressed	chr4	20420852	20424185	-	promoter
3	LOC_Os04g56990	Myb-like DNA-binding domain containing protein, putative, expressed	gene	Myb-like DNA-binding domain containing protein, putative, expressed	chr4	33787515	33791147	-	promoter
3	LOC_Os01g70025	transferase family protein, putative	gene	transferase family protein, putative	chr1	40507915	40509801	+	promoter
3	LOC_Os03g52140	hypothetical protein	gene	hypothetical protein	chr3	29925913	29926610	-	promoter
3	LOC_Os04g39050	ZOS4-07 - C2H2 zinc finger protein, expressed	gene	ZOS4-07 - C2H2 zinc finger protein, expressed	chr4	23005797	23007088	+	promoter
3	LOC_Os02g50770	peroxidase precursor, putative, expressed	gene	peroxidase precursor, putative, expressed	chr2	30993878	30995896	+	promoter
3	LOC_Os04g03890	cytochrome P450, putative	gene	cytochrome P450, putative	chr4	1775490	1776944	-	promoter
3	LOC_Os12g35450	conserved hypothetical protein	gene	conserved hypothetical protein	chr12	21521436	21521825	+	promoter
3	LOC_Os12g01770	protein phosphatase 2c, putative, expressed	gene	protein phosphatase 2c, putative, expressed	chr12	468381	471420	+	promoter
3	LOC_Os12g22110	ABC-2 type transporter, putative	gene	ABC-2 type transporter, putative	chr12	12430802	12438237	-	promoter
3	LOC_Os06g34100	hypothetical protein	gene	hypothetical protein	chr6	19853120	19855538	+	promoter
3	LOC_Os03g02650	ligA, putative, expressed	gene	ligA, putative, expressed	chr3	977814	978768	+	promoter
3	LOC_Os03g63030	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr3	35633407	35637218	-	promoter
3	LOC_Os11g32330	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr11	18629617	18632149	+	promoter
3	LOC_Os03g05440	DUF677 domain containing protein, putative, expressed	gene	DUF677 domain containing protein, putative, expressed	chr3	2684553	2687287	-	promoter
3	LOC_Os03g50080	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	chr3	28558525	28559884	-	promoter,downstream
3	LOC_Os01g05160	hypothetical protein	gene	hypothetical protein	chr1	2418659	2419162	+	promoter
3	LOC_Os08g08250	expressed protein	gene	expressed protein	chr8	4717253	4718134	+	promoter
3	LOC_Os07g12670	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	7238166	7240110	-	promoter
3	LOC_Os02g37000	mitochondrial prohibitin complex protein 1, putative, expressed	gene	mitochondrial prohibitin complex protein 1, putative, expressed	chr2	22341194	22342316	-	promoter
3	LOC_Os08g44020	rhamnogalacturonate lyase, putative, expressed	gene	rhamnogalacturonate lyase, putative, expressed	chr8	27711327	27715987	+	promoter
3	LOC_Os03g03970	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr3	1812469	1812837	-	promoter
3	LOC_Os01g68210	hypothetical protein	gene	hypothetical protein	chr1	39642649	39643800	-	promoter
3	LOC_Os04g11850	conserved hypothetical protein	gene	conserved hypothetical protein	chr4	6497026	6498728	+	promoter
3	LOC_Os01g51210	uncharacterized protein PA4923, putative, expressed	gene	uncharacterized protein PA4923, putative, expressed	chr1	29436231	29438837	-	promoter
3	LOC_Os04g05040	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr4	2444447	2446620	-	promoter
3	LOC_Os11g05580	conserved hypothetical protein	gene	conserved hypothetical protein	chr11	2530443	2531819	-	promoter
3	LOC_Os10g35460	COBRA, putative, expressed	gene	COBRA, putative, expressed	chr10	18904566	18907667	+	promoter
3	LOC_Os03g02570	dihydrodipicolinate reductase, putative	gene	dihydrodipicolinate reductase, putative	chr3	949271	951600	-	promoter
3	LOC_Os09g23399	expressed protein	gene	expressed protein	chr9	13906884	13908785	-	promoter
3	LOC_Os06g23549	unknown	gene	unknown	chr6	13740256	13740974	+	promoter,downstream
3	LOC_Os05g36010	OsSub47 - Putative Subtilisin homologue, expressed	gene	OsSub47 - Putative Subtilisin homologue, expressed	chr5	21262940	21265736	-	promoter
3	LOC_Os11g47780	pollen signalling protein with adenylyl cyclase activity, putative, expressed	gene	pollen signalling protein with adenylyl cyclase activity, putative, expressed	chr11	28288519	28292502	-	promoter
3	LOC_Os03g55370	conserved hypothetical protein	gene	conserved hypothetical protein	chr3	31494359	31495279	+	promoter
3	LOC_Os06g06460	histone H3, putative, expressed	gene	histone H3, putative, expressed	chr6	3039093	3040122	-	promoter
3	LOC_Os11g37270	AMBP1 - Antimicrobial peptide MBP-1 family protein precursor, expressed	gene	AMBP1 - Antimicrobial peptide MBP-1 family protein precursor, expressed	chr11	21545788	21547514	-	promoter
3	LOC_Os03g05700	expressed protein	gene	expressed protein	chr3	2840786	2841387	-	promoter
3	LOC_Os01g47110	expressed protein	gene	expressed protein	chr1	26915161	26915526	+	promoter,downstream
3	LOC_Os08g37010	gibberellin receptor GID1L2, putative, expressed	gene	gibberellin receptor GID1L2, putative, expressed	chr8	23400336	23401631	-	promoter
3	LOC_Os02g54480	RNA-directed DNA polymerase, putative	gene	RNA-directed DNA polymerase, putative	chr2	33356001	33357978	-	promoter
3	LOC_Os02g58430	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr2	35726314	35731898	-	promoter
3	LOC_Os02g48850	plant-specific domain TIGR01615 family protein	gene	plant-specific domain TIGR01615 family protein	chr2	29880371	29881234	+	promoter
3	LOC_Os02g56160	kelch repeat protein, putative	gene	kelch repeat protein, putative	chr2	34355335	34356540	+	promoter,downstream
3	LOC_Os03g20470	cytochrome b5-like Heme/Steroid binding domain containing protein, expressed	gene	cytochrome b5-like Heme/Steroid binding domain containing protein, expressed	chr3	11598541	11601606	+	promoter
3	LOC_Os08g10490	heavy metal-associated domain containing protein	gene	heavy metal-associated domain containing protein	chr8	6161002	6162206	-	promoter
3	LOC_Os06g49540	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr6	29999124	30005104	+	promoter
3	LOC_Os10g42160	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr10	22605700	22607632	-	promoter
3	LOC_Os11g26360	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr11	14619144	14622461	-	promoter
3	LOC_Os10g40420	LTPL138 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	gene	LTPL138 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	chr10	21583869	21584729	-	promoter
3	LOC_Os01g69240	CBS domain containing membrane protein, putative, expressed	gene	CBS domain containing membrane protein, putative, expressed	chr1	40237642	40239411	-	promoter
3	LOC_Os03g45330	hsp20/alpha crystallin family protein, putative	gene	hsp20/alpha crystallin family protein, putative	chr3	25590650	25594291	-	promoter
3	LOC_Os06g44275	expressed protein	gene	expressed protein	chr6	26710494	26713309	+	promoter
3	LOC_Os03g18560	DUF538 domain containing protein, putative, expressed	gene	DUF538 domain containing protein, putative, expressed	chr3	10390573	10391682	-	promoter
3	LOC_Os11g44800	expressed protein	gene	expressed protein	chr11	26640330	26641859	+	promoter
3	LOC_Os08g43980	carrier, putative	gene	carrier, putative	chr8	27691260	27691991	+	promoter,downstream
3	LOC_Os11g01470	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr11	271765	279565	+	promoter
3	LOC_Os12g17140	mla1, putative	gene	mla1, putative	chr12	9806584	9809880	-	promoter
3	LOC_Os09g22500	hypothetical protein	gene	hypothetical protein	chr9	13570645	13575072	-	promoter
3	LOC_Os08g09610	expressed protein	gene	expressed protein	chr8	5562236	5563427	-	promoter
3	LOC_Os02g05350	hypothetical protein	gene	hypothetical protein	chr2	2572267	2572785	-	promoter,downstream
3	LOC_Os06g19410	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr6	11057565	11061013	-	promoter
3	LOC_Os11g10110	expressed protein	gene	expressed protein	chr11	5460602	5462057	-	promoter
3	LOC_Os03g31714	unknown	gene	unknown	chr3	18115928	18117728	-	promoter
3	LOC_Os02g06980	expressed protein	gene	expressed protein	chr2	3564344	3565036	-	promoter
3	LOC_Os04g35610	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr4	21531651	21533708	-	promoter,downstream
3	LOC_Os03g31380	hypothetical protein	gene	hypothetical protein	chr3	17876671	17879053	+	promoter
3	LOC_Os05g40190	thioredoxin, putative, expressed	gene	thioredoxin, putative, expressed	chr5	23537949	23542535	-	promoter,downstream
3	LOC_Os03g64390	hypothetical protein	gene	hypothetical protein	chr3	36383074	36384273	-	promoter
3	LOC_Os10g01290	PHLOEM 2-LIKE A10, putative, expressed	gene	PHLOEM 2-LIKE A10, putative, expressed	chr10	185839	187513	-	promoter
3	LOC_Os06g07978	peptidase, T1 family, putative	gene	peptidase, T1 family, putative	chr6	3869165	3869917	+	promoter,downstream
3	LOC_Os02g38589	OsFBX55 - F-box domain containing protein, expressed	gene	OsFBX55 - F-box domain containing protein, expressed	chr2	23326565	23327865	-	promoter
3	LOC_Os11g42170	expressed protein	gene	expressed protein	chr11	24933806	24934516	+	promoter
3	LOC_Os11g09990	mTERF family protein, expressed	gene	mTERF family protein, expressed	chr11	5353461	5355130	-	promoter
3	LOC_Os05g14600	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr5	8320115	8323738	-	promoter
3	LOC_Os06g08800	RNA cap guanine-N2 methyltransferase domain containing protein, expressed	gene	RNA cap guanine-N2 methyltransferase domain containing protein, expressed	chr6	4400652	4402236	+	promoter
3	LOC_Os07g03030	expressed protein	gene	expressed protein	chr7	1142552	1144530	+	promoter
3	LOC_Os02g05910	phytosulfokine receptor precursor, putative, expressed	gene	phytosulfokine receptor precursor, putative, expressed	chr2	2933892	2937377	-	promoter
3	LOC_Os03g03670	expressed protein	gene	expressed protein	chr3	1629157	1630860	-	promoter
3	LOC_Os11g48080	SOR/SNZ family protein, putative, expressed	gene	SOR/SNZ family protein, putative, expressed	chr11	28464225	28465703	+	promoter,downstream
3	LOC_Os02g21440	hypothetical protein	gene	hypothetical protein	chr2	12729564	12729896	-	promoter,downstream
3	LOC_Os07g46320	uncharacterized UPF0114 domain containing protein, expressed	gene	uncharacterized UPF0114 domain containing protein, expressed	chr7	27627333	27628976	+	promoter
3	LOC_Os11g01390	OsCML25 - Calmodulin-related calcium sensor protein	gene	OsCML25 - Calmodulin-related calcium sensor protein	chr11	244190	244639	-	promoter
3	LOC_Os06g05990	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr6	2748784	2753800	-	promoter
3	LOC_Os02g58200	expressed protein	gene	expressed protein	chr2	35615875	35616373	-	promoter
3	LOC_Os11g39260	NBS-LRR disease resistance protein, putative	gene	NBS-LRR disease resistance protein, putative	chr11	22911516	22912238	-	promoter
3	LOC_Os02g09050	expressed protein	gene	expressed protein	chr2	4629591	4630170	-	promoter,downstream
3	LOC_Os05g25900	hypothetical protein	gene	hypothetical protein	chr5	15009585	15009809	+	promoter
3	LOC_Os05g29030	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr5	16956800	16961577	-	promoter
3	LOC_Os05g47680	conserved hypothetical protein	gene	conserved hypothetical protein	chr5	27257929	27260227	-	promoter
3	LOC_Os05g46310	hypothetical protein	gene	hypothetical protein	chr5	26782549	26782929	+	promoter,downstream
3	LOC_Os03g51100	hypothetical protein	gene	hypothetical protein	chr3	29209441	29210443	-	promoter
3	LOC_Os04g57240	hypothetical protein	gene	hypothetical protein	chr4	33910630	33911740	-	promoter
3	LOC_Os03g55860	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr3	31786937	31793177	+	promoter
3	LOC_Os04g14200	conserved hypothetical protein	gene	conserved hypothetical protein	chr4	7954626	7955564	+	promoter,downstream
3	LOC_Os06g50724	START domain containing protein	gene	START domain containing protein	chr6	30687277	30690821	-	promoter
3	LOC_Os09g28620	gibberellin receptor GID1L2, putative, expressed	gene	gibberellin receptor GID1L2, putative, expressed	chr9	17413086	17414603	+	promoter
3	LOC_Os08g16680	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr8	10201124	10205096	-	promoter
3	LOC_Os04g40380	hypothetical protein	gene	hypothetical protein	chr4	23819848	23820486	-	promoter
3	LOC_Os06g33720	flavin-containing monooxygenase family protein, putative, expressed	gene	flavin-containing monooxygenase family protein, putative, expressed	chr6	19618926	19620613	-	promoter
3	LOC_Os02g51710	wound/stress protein, putative, expressed	gene	wound/stress protein, putative, expressed	chr2	31670577	31671687	+	promoter
3	LOC_Os12g23200	photosystem I reaction center subunit XI, chloroplast precursor, putative, expressed	gene	photosystem I reaction center subunit XI, chloroplast precursor, putative, expressed	chr12	13112478	13114695	+	promoter
3	LOC_Os08g45240	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr8	28397522	28406281	-	promoter
3	LOC_Os02g27780	hypothetical protein	gene	hypothetical protein	chr2	16443107	16443529	-	promoter
3	LOC_Os11g40170	conserved hypothetical protein	gene	conserved hypothetical protein	chr11	23486598	23487029	-	promoter
3	LOC_Os04g31250	DEFL49 - Defensin and Defensin-like DEFL family, expressed	gene	DEFL49 - Defensin and Defensin-like DEFL family, expressed	chr4	18523914	18524485	+	promoter
3	LOC_Os07g12790	expressed protein	gene	expressed protein	chr7	7316055	7317065	+	promoter
3	LOC_Os11g42500	dirigent, putative, expressed	gene	dirigent, putative, expressed	chr11	25127594	25128736	+	promoter
3	LOC_Os05g39080	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr5	22848330	22853125	-	promoter
3	LOC_Os08g34170	CAF1 family ribonuclease containing protein, putative, expressed	gene	CAF1 family ribonuclease containing protein, putative, expressed	chr8	21416003	21418380	+	promoter,downstream
3	LOC_Os03g17700	CGMC_MAPKCGMC_2_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	gene	CGMC_MAPKCGMC_2_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	chr3	9846636	9849409	-	promoter
3	LOC_Os03g20480	expressed protein	gene	expressed protein	chr3	11601962	11602597	+	promoter
3	LOC_Os08g42990	expressed protein	gene	expressed protein	chr8	27166565	27168593	-	promoter
3	LOC_Os11g47379	unknown	gene	unknown	chr11	27977665	27978360	+	promoter
3	LOC_Os07g19410	expressed protein	gene	expressed protein	chr7	11484817	11486208	-	promoter
3	LOC_Os09g25880	expressed protein	gene	expressed protein	chr9	15520945	15522889	-	promoter
3	LOC_Os10g33820	expressed protein	gene	expressed protein	chr10	17867749	17869305	-	promoter
3	LOC_Os06g06220	hypothetical protein	gene	hypothetical protein	chr6	2876441	2876707	+	promoter
3	LOC_Os05g04760	hypothetical protein	gene	hypothetical protein	chr5	2253669	2254007	-	promoter
3	LOC_Os05g48860	interferon-induced guanylate-binding protein 2, putative, expressed	gene	interferon-induced guanylate-binding protein 2, putative, expressed	chr5	27946869	27947962	-	promoter
3	LOC_Os01g01180	expressed protein	gene	expressed protein	chr1	87986	88204	-	promoter
3	LOC_Os08g34280	cinnamoyl-CoA reductase, putative, expressed	gene	cinnamoyl-CoA reductase, putative, expressed	chr8	21503706	21510943	-	promoter
3	LOC_Os07g02920	DUF538 domain containing protein, putative, expressed	gene	DUF538 domain containing protein, putative, expressed	chr7	1088493	1089170	-	promoter
3	LOC_Os10g20520	hypothetical protein	gene	hypothetical protein	chr10	10272685	10272986	-	promoter
3	LOC_Os01g07900	expressed protein	gene	expressed protein	chr1	3818067	3818782	-	promoter,downstream
3	LOC_Os10g25150	expressed protein	gene	expressed protein	chr10	12911828	12912322	+	promoter
3	LOC_Os01g50780	hypothetical protein	gene	hypothetical protein	chr1	29170199	29171757	+	promoter
3	LOC_Os03g49485	expressed protein	gene	expressed protein	chr3	28156654	28157519	-	promoter,downstream
3	LOC_Os04g58710	AMP-binding domain containing protein, expressed	gene	AMP-binding domain containing protein, expressed	chr4	34723331	34725551	-	promoter
3	LOC_Os09g23780	expressed protein	gene	expressed protein	chr9	14152040	14153149	-	promoter
3	LOC_Os07g43340	hypothetical protein	gene	hypothetical protein	chr7	25943302	25943687	+	promoter,downstream
3	LOC_Os07g46670	early response to dehydration 15, putative, expressed	gene	early response to dehydration 15, putative, expressed	chr7	27888420	27890323	-	promoter
3	LOC_Os02g33780	serine-aspartate repeat-containing protein I precursor, putative, expressed	gene	serine-aspartate repeat-containing protein I precursor, putative, expressed	chr2	20146585	20148253	+	promoter
3	LOC_Os04g48950	fringe-related protein, putative, expressed	gene	fringe-related protein, putative, expressed	chr4	29009251	29012029	-	promoter
3	LOC_Os03g17670	hypothetical protein	gene	hypothetical protein	chr3	9827084	9827834	+	promoter
3	LOC_Os11g35350	expressed protein	gene	expressed protein	chr11	20257707	20258522	-	promoter
3	LOC_Os12g17500	hypothetical protein	gene	hypothetical protein	chr12	10019361	10020049	-	promoter
3	LOC_Os07g04900	NBS-LRR disease resistance protein, putative	gene	NBS-LRR disease resistance protein, putative	chr7	2161645	2166123	-	promoter
3	LOC_Os08g25470	hypothetical protein	gene	hypothetical protein	chr8	15499464	15500807	+	promoter
3	LOC_Os12g17540	vignain precursor, putative	gene	vignain precursor, putative	chr12	10050822	10052611	+	promoter
3	LOC_Os05g41470	hypothetical protein	gene	hypothetical protein	chr5	24219799	24220230	+	promoter
3	LOC_Os05g06900	hypothetical protein	gene	hypothetical protein	chr5	3612126	3613706	-	promoter
3	LOC_Os02g38499	F-box domain containing protein	gene	F-box domain containing protein	chr2	23280230	23281363	-	promoter
3	LOC_Os04g44410	OsSCP25 - Putative Serine Carboxypeptidase homologue, expressed	gene	OsSCP25 - Putative Serine Carboxypeptidase homologue, expressed	chr4	26102428	26107009	-	promoter
3	LOC_Os08g01400	expressed protein	gene	expressed protein	chr8	259013	260320	-	promoter
3	LOC_Os01g43040	amino acid transporter, putative, expressed	gene	amino acid transporter, putative, expressed	chr1	24550911	24554535	-	promoter
3	LOC_Os09g36280	glycosyl hydrolases family 17, putative, expressed	gene	glycosyl hydrolases family 17, putative, expressed	chr9	20937982	20939249	-	promoter
3	LOC_Os04g34470	hypothetical protein	gene	hypothetical protein	chr4	20705279	20705737	+	promoter
3	LOC_Os12g05100	conserved hypothetical protein	gene	conserved hypothetical protein	chr12	2240328	2243608	+	promoter,downstream
3	LOC_Os05g49360	hypothetical protein	gene	hypothetical protein	chr5	28247219	28247702	+	promoter
3	LOC_Os04g59360	csAtPR5, putative	gene	csAtPR5, putative	chr4	35098087	35101057	+	promoter
3	LOC_Os02g45930	expressed protein	gene	expressed protein	chr2	27983497	27984718	-	promoter
3	LOC_Os05g04960	phosphoglycerate mutase, putative, expressed	gene	phosphoglycerate mutase, putative, expressed	chr5	2400624	2402008	+	promoter
3	LOC_Os04g42350	heavy metal-associated domain containing protein	gene	heavy metal-associated domain containing protein	chr4	24874650	24876840	-	promoter
3	LOC_Os03g63554	DUF565 domain containing protein, putative, expressed	gene	DUF565 domain containing protein, putative, expressed	chr3	35892425	35894668	+	promoter
3	LOC_Os11g36350	OsFBDUF50 - F-box and DUF domain containing protein	gene	OsFBDUF50 - F-box and DUF domain containing protein	chr11	20952478	20953857	-	promoter
3	LOC_Os06g20870	pentatricopeptide repeat protein PPR1106-17, putative, expressed	gene	pentatricopeptide repeat protein PPR1106-17, putative, expressed	chr6	12053983	12057675	-	promoter
3	LOC_Os10g07430	expressed protein	gene	expressed protein	chr10	3931938	3934985	+	promoter,downstream
3	LOC_Os09g39540	40S ribosomal protein S25, putative, expressed	gene	40S ribosomal protein S25, putative, expressed	chr9	22701241	22702652	-	promoter
3	LOC_Os07g06430	hypothetical protein	gene	hypothetical protein	chr7	3115425	3116180	-	promoter
3	LOC_Os07g47000	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	28077081	28078799	-	promoter
3	LOC_Os01g59530	OsCML1 - Calmodulin-related calcium sensor protein, expressed	gene	OsCML1 - Calmodulin-related calcium sensor protein, expressed	chr1	34419947	34422635	+	promoter
3	LOC_Os09g29200	glutathione S-transferase, putative, expressed	gene	glutathione S-transferase, putative, expressed	chr9	17746171	17747912	+	promoter
3	LOC_Os12g31485	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr12	18907950	18908359	+	promoter
3	LOC_Os02g13630	expressed protein	gene	expressed protein	chr2	7314098	7314657	-	promoter
3	LOC_Os08g44160	hypothetical protein	gene	hypothetical protein	chr8	27794856	27800038	-	promoter
3	LOC_Os12g04800	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr12	2045502	2047557	-	promoter
3	LOC_Os04g48740	hypothetical protein	gene	hypothetical protein	chr4	28884474	28885013	-	promoter
3	LOC_Os01g66570	ZOS1-19 - C2H2 zinc finger protein	gene	ZOS1-19 - C2H2 zinc finger protein	chr1	38654193	38655404	-	promoter
3	LOC_Os07g30210	integral membrane protein DUF6 domain containing protein, expressed	gene	integral membrane protein DUF6 domain containing protein, expressed	chr7	17844151	17847724	-	promoter
3	LOC_Os01g04580	Ser/Thr protein kinase, putative, expressed	gene	Ser/Thr protein kinase, putative, expressed	chr1	2052583	2056638	+	promoter
3	LOC_Os02g32640	expressed protein	gene	expressed protein	chr2	19344451	19345706	-	promoter
3	LOC_Os04g40340	expressed protein	gene	expressed protein	chr4	23798891	23802227	-	promoter
3	LOC_Os04g52190	vacuolar-sorting receptor precursor, putative, expressed	gene	vacuolar-sorting receptor precursor, putative, expressed	chr4	30818723	30822972	+	promoter,downstream
3	LOC_Os08g39500	60S ribosomal protein L31, putative, expressed	gene	60S ribosomal protein L31, putative, expressed	chr8	24990205	24991792	-	promoter
3	LOC_Os07g23120	expressed protein	gene	expressed protein	chr7	13036527	13037647	-	promoter
3	LOC_Os04g21120	expressed protein	gene	expressed protein	chr4	11878515	11879563	-	promoter
3	LOC_Os01g59120	cyclin, putative, expressed	gene	cyclin, putative, expressed	chr1	34148387	34151373	-	promoter,downstream
3	LOC_Os05g41520	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr5	24246655	24248545	-	promoter
3	LOC_Os02g54360	enzyme of the cupin superfamily protein, putative, expressed	gene	enzyme of the cupin superfamily protein, putative, expressed	chr2	33315953	33316670	-	promoter
3	LOC_Os09g33750	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr9	19932715	19937200	+	promoter
3	LOC_Os04g51040	OsWAK50 - OsWAK receptor-like protein kinase, expressed	gene	OsWAK50 - OsWAK receptor-like protein kinase, expressed	chr4	30029935	30032564	-	promoter
3	LOC_Os07g13480	hypothetical protein	gene	hypothetical protein	chr7	7723059	7724151	-	promoter
3	LOC_Os01g54540	ribosomal protein L13, putative, expressed	gene	ribosomal protein L13, putative, expressed	chr1	31365971	31368372	+	promoter
3	LOC_Os11g01300	protein transport protein Sec61 subunit beta, putative, expressed	gene	protein transport protein Sec61 subunit beta, putative, expressed	chr11	161283	162474	-	promoter
3	LOC_Os08g02420	OsCML7 - Calmodulin-related calcium sensor protein, expressed	gene	OsCML7 - Calmodulin-related calcium sensor protein, expressed	chr8	968283	969547	-	promoter
3	LOC_Os05g07270	DUF260 domain containing protein, putative	gene	DUF260 domain containing protein, putative	chr5	3843751	3845457	-	promoter
3	LOC_Os04g40040	copper methylamine oxidase precursor, putative, expressed	gene	copper methylamine oxidase precursor, putative, expressed	chr4	23644562	23651133	-	promoter
3	LOC_Os06g21570	Os6bglu24 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed	gene	Os6bglu24 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed	chr6	12436998	12441743	-	promoter
3	LOC_Os05g51190	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr5	29297266	29302050	-	promoter
3	LOC_Os02g54180	expressed protein	gene	expressed protein	chr2	33214492	33215291	+	promoter
3	LOC_Os11g39580	hypothetical protein	gene	hypothetical protein	chr11	23115884	23118386	-	promoter
3	LOC_Os05g12481	expressed protein	gene	expressed protein	chr5	7168756	7169540	-	promoter
3	LOC_Os06g50100	tyrosine protein kinase domain containing protein, putative, expressed	gene	tyrosine protein kinase domain containing protein, putative, expressed	chr6	30345757	30349036	-	promoter
3	LOC_Os03g37110	hypothetical protein	gene	hypothetical protein	chr3	20564744	20567034	-	promoter
3	LOC_Os02g18380	60S ribosomal protein L27-3, putative, expressed	gene	60S ribosomal protein L27-3, putative, expressed	chr2	10700748	10701514	-	promoter
3	LOC_Os08g25710	CSLD3 - cellulose synthase-like family D, expressed	gene	CSLD3 - cellulose synthase-like family D, expressed	chr8	15639361	15643226	-	promoter
3	LOC_Os12g41970	lipase class 3 family protein, putative	gene	lipase class 3 family protein, putative	chr12	25992801	25993931	-	promoter
3	LOC_Os08g25830	conserved hypothetical protein	gene	conserved hypothetical protein	chr8	15715362	15716303	+	promoter
3	LOC_Os10g32820	60S ribosomal protein L21-2, putative, expressed	gene	60S ribosomal protein L21-2, putative, expressed	chr10	17113303	17114532	-	promoter
3	LOC_Os08g17090	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr8	10457592	10460687	+	promoter
3	LOC_Os02g13180	SKP1, putative, expressed	gene	SKP1, putative, expressed	chr2	7024790	7025386	+	promoter
3	LOC_Os06g13680	B12D protein, putative, expressed	gene	B12D protein, putative, expressed	chr6	7590913	7592110	-	promoter
3	LOC_Os05g06770	40S ribosomal protein S27a, putative, expressed	gene	40S ribosomal protein S27a, putative, expressed	chr5	3535313	3536171	+	promoter
3	LOC_Os01g61970	Lung seven transmembrane receptor domain containing protein, putative, expressed	gene	Lung seven transmembrane receptor domain containing protein, putative, expressed	chr1	35870028	35872182	-	promoter
3	LOC_Os01g44250	CBS domain containing membrane protein, putative, expressed	gene	CBS domain containing membrane protein, putative, expressed	chr1	25367437	25369967	+	promoter
3	LOC_Os08g41020	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr8	25941067	25945456	-	promoter
3	LOC_Os07g23290	transposon protein, putative, CACTA, En/Spm sub-class	gene	transposon protein, putative, CACTA, En/Spm sub-class	chr7	13122449	13125860	-	promoter
3	LOC_Os08g42930	disease resistance protein RGA1, putative, expressed	gene	disease resistance protein RGA1, putative, expressed	chr8	27127381	27131011	+	promoter
3	LOC_Os08g13480	hypothetical protein	gene	hypothetical protein	chr8	8022051	8022497	+	promoter
3	LOC_Os02g03800	THION22 - Plant thionin family protein precursor, expressed	gene	THION22 - Plant thionin family protein precursor, expressed	chr2	1600388	1601422	+	promoter
3	LOC_Os05g02700	expressed protein	gene	expressed protein	chr5	958468	959924	-	promoter
3	LOC_Os09g27620	PHD-finger domain containing protein, putative	gene	PHD-finger domain containing protein, putative	chr9	16785040	16787254	+	promoter
3	LOC_Os03g18820	glycosyltransferase, putative, expressed	gene	glycosyltransferase, putative, expressed	chr3	10545944	10548430	-	promoter
3	LOC_Os12g05840	Cupin domain containing protein, expressed	gene	Cupin domain containing protein, expressed	chr12	2687758	2688828	-	promoter
3	LOC_Os05g40310	expressed protein	gene	expressed protein	chr5	23626090	23628542	-	promoter
3	LOC_Os07g47310	hypothetical protein	gene	hypothetical protein	chr7	28281878	28284863	+	promoter
3	LOC_Os05g28840	expressed protein	gene	expressed protein	chr5	16848587	16849724	-	promoter
3	LOC_Os01g14920	zinc knuckle family protein, putative, expressed	gene	zinc knuckle family protein, putative, expressed	chr1	8358014	8361270	-	promoter
3	LOC_Os07g08934	expressed protein	gene	expressed protein	chr7	4644898	4645754	-	promoter,downstream
3	LOC_Os10g10410	OsFBX377 - F-box domain containing protein	gene	OsFBX377 - F-box domain containing protein	chr10	5734185	5735435	-	promoter
3	LOC_Os07g05480	photosystem I reaction center subunit, chloroplast precursor, putative, expressed	gene	photosystem I reaction center subunit, chloroplast precursor, putative, expressed	chr7	2545428	2546415	+	promoter
3	LOC_Os08g40240	calvin cycle protein CP12, putative, expressed	gene	calvin cycle protein CP12, putative, expressed	chr8	25448249	25448893	+	promoter
3	LOC_Os05g02200	cysteine-rich repeat secretory protein 55 precursor, putative, expressed	gene	cysteine-rich repeat secretory protein 55 precursor, putative, expressed	chr5	690756	691909	-	promoter
3	LOC_Os04g53010	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr4	31384181	31390099	+	promoter
3	LOC_Os04g23440	helix-loop-helix DNA-binding domain containing protein, expressed	gene	helix-loop-helix DNA-binding domain containing protein, expressed	chr4	13390441	13392053	-	promoter
3	LOC_Os01g48700	transcription factor Dp, putative, expressed	gene	transcription factor Dp, putative, expressed	chr1	27923857	27927389	-	promoter
3	LOC_Os01g56110	RNA recognition motif containing protein, putative	gene	RNA recognition motif containing protein, putative	chr1	32302655	32305593	+	promoter
3	LOC_Os03g42235	expressed protein	gene	expressed protein	chr3	23494508	23495575	+	promoter
3	LOC_Os06g43260	hypothetical protein	gene	hypothetical protein	chr6	25992669	25994758	-	promoter
3	LOC_Os01g73630	rhoGAP domain containing protein, expressed	gene	rhoGAP domain containing protein, expressed	chr1	42653450	42654732	+	promoter
3	LOC_Os01g59090	thylakoid lumenal 20 kDa protein, putative, expressed	gene	thylakoid lumenal 20 kDa protein, putative, expressed	chr1	34138724	34140171	+	promoter,downstream
3	LOC_Os01g60340	NTMC2Type1.1 protein, putative	gene	NTMC2Type1.1 protein, putative	chr1	34901260	34905912	-	promoter,downstream
3	LOC_Os08g13060	MBTB22 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed	gene	MBTB22 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed	chr8	7755670	7757173	-	promoter,downstream
3	LOC_Os03g61590	expressed protein	gene	expressed protein	chr3	34916146	34916690	+	promoter,downstream
3	LOC_Os12g06750	DEFL16 - Defensin and Defensin-like DEFL family	gene	DEFL16 - Defensin and Defensin-like DEFL family	chr12	3283378	3284162	+	promoter
3	LOC_Os02g56014	40S ribosomal protein S30, putative, expressed	gene	40S ribosomal protein S30, putative, expressed	chr2	34289952	34290599	-	promoter
3	LOC_Os10g35680	acetyltransferase, GNAT family, putative, expressed	gene	acetyltransferase, GNAT family, putative, expressed	chr10	19011051	19011796	-	promoter
3	LOC_Os02g26450	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr2	15523769	15526038	-	promoter
3	LOC_Os08g43880	expressed protein	gene	expressed protein	chr8	27668802	27670616	-	promoter,downstream
3	LOC_Os02g42690	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr2	25665254	25671356	-	promoter
3	LOC_Os05g15670	conserved hypothetical protein	gene	conserved hypothetical protein	chr5	8864802	8865384	-	promoter
3	LOC_Os08g02150	a_IG002N01.7, putative, expressed	gene	a_IG002N01.7, putative, expressed	chr8	719518	720865	-	promoter
3	LOC_Os05g14740	expressed protein	gene	expressed protein	chr5	8374724	8376787	-	promoter
3	LOC_Os04g03450	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr4	1480105	1487654	-	promoter
3	LOC_Os04g28310	hypothetical protein	gene	hypothetical protein	chr4	16588336	16591571	+	promoter
3	LOC_Os01g08380	transferase family protein, putative, expressed	gene	transferase family protein, putative, expressed	chr1	4109380	4111127	-	promoter
3	LOC_Os03g38510	hypothetical protein	gene	hypothetical protein	chr3	21375013	21375896	-	promoter
3	LOC_Os10g39010	TKL_IRAK_CrRLK1L-1.16 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed	gene	TKL_IRAK_CrRLK1L-1.16 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed	chr10	20719498	20724362	-	promoter
3	LOC_Os04g02360	transposon protein, putative, CACTA, En/Spm sub-class	gene	transposon protein, putative, CACTA, En/Spm sub-class	chr4	837051	841096	+	promoter
3	LOC_Os08g44190	ZOS8-13 - C2H2 zinc finger protein, expressed	gene	ZOS8-13 - C2H2 zinc finger protein, expressed	chr8	27815526	27816248	-	promoter
3	LOC_Os02g57000	C2 domain containing protein, putative, expressed	gene	C2 domain containing protein, putative, expressed	chr2	34914673	34915867	+	promoter
3	LOC_Os05g08920	late embryogenesis abundant protein, putative, expressed	gene	late embryogenesis abundant protein, putative, expressed	chr5	4936604	4937446	-	promoter,downstream
3	LOC_Os01g64640	histone H3, putative, expressed	gene	histone H3, putative, expressed	chr1	37512703	37513521	+	promoter
3	LOC_Os12g01400	OsCML26 - Calmodulin-related calcium sensor protein	gene	OsCML26 - Calmodulin-related calcium sensor protein	chr12	259311	260030	-	promoter
3	LOC_Os03g29680	EARLY flowering protein, putative, expressed	gene	EARLY flowering protein, putative, expressed	chr3	16918828	16921336	-	promoter
3	LOC_Os10g39840	glycosyl hydrolases family 16, putative, expressed	gene	glycosyl hydrolases family 16, putative, expressed	chr10	21248667	21250713	+	promoter
3	LOC_Os04g10470	conserved hypothetical protein	gene	conserved hypothetical protein	chr4	5686125	5686496	-	promoter
3	LOC_Os09g07490	hypothetical protein	gene	hypothetical protein	chr9	3749054	3749551	+	promoter,downstream
3	LOC_Os12g38400	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr12	23521388	23527011	-	promoter
3	LOC_Os06g45135	unknown	gene	unknown	chr6	27298167	27298279	+	promoter,downstream
3	LOC_Os06g23790	expressed protein	gene	expressed protein	chr6	13899585	13900963	-	promoter
3	LOC_Os02g20320	OsSAUR7 - Auxin-responsive SAUR gene family member	gene	OsSAUR7 - Auxin-responsive SAUR gene family member	chr2	11968301	11968732	-	promoter
3	LOC_Os06g06340	LTPL20 - Protease inhibitor/seed storage/LTP family protein precursor, putative	gene	LTPL20 - Protease inhibitor/seed storage/LTP family protein precursor, putative	chr6	2946712	2947192	+	promoter
3	LOC_Os05g01256	helix-loop-helix DNA-binding domain containing protein, expressed	gene	helix-loop-helix DNA-binding domain containing protein, expressed	chr5	178801	181635	-	promoter,downstream
3	LOC_Os11g43540	hypothetical protein	gene	hypothetical protein	chr11	25807791	25809016	+	promoter
3	LOC_Os03g56430	expressed protein	gene	expressed protein	chr3	32157684	32161410	+	promoter
3	LOC_Os01g28920	retrotransposon, putative, centromere-specific	gene	retrotransposon, putative, centromere-specific	chr1	16205142	16205624	-	promoter
3	LOC_Os01g18860	S-adenosylmethionine synthetase, putative, expressed	gene	S-adenosylmethionine synthetase, putative, expressed	chr1	10656439	10659113	-	promoter
3	LOC_Os12g40930	hypothetical protein	gene	hypothetical protein	chr12	25304088	25306843	-	promoter
3	LOC_Os01g40680	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr1	22991508	22993127	-	promoter
3	LOC_Os03g52475	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr3	30108689	30109696	-	promoter
3	LOC_Os01g48320	transcription factor like protein, putative, expressed	gene	transcription factor like protein, putative, expressed	chr1	27689367	27691165	-	promoter,downstream
3	LOC_Os01g04730	ribosomal protein L24, putative, expressed	gene	ribosomal protein L24, putative, expressed	chr1	2136763	2137996	+	promoter,downstream
3	LOC_Os12g32280	SWIB/MDM2 domain containing protein, expressed	gene	SWIB/MDM2 domain containing protein, expressed	chr12	19459498	19464159	-	promoter
3	LOC_Os05g50940	conserved hypothetical protein	gene	conserved hypothetical protein	chr5	29165609	29166605	+	promoter
3	LOC_Os06g06830	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr6	3221905	3227837	+	promoter
3	LOC_Os11g06860	expressed protein	gene	expressed protein	chr11	3363464	3364750	-	promoter
3	LOC_Os09g36070	cytochrome P450, putative	gene	cytochrome P450, putative	chr9	20768152	20770338	+	promoter
3	LOC_Os06g50090	expressed protein	gene	expressed protein	chr6	30345016	30345330	-	promoter
3	LOC_Os01g63854	transmembrane amino acid transporter protein, putative, expressed	gene	transmembrane amino acid transporter protein, putative, expressed	chr1	37042437	37048849	-	promoter
3	LOC_Os04g14740	hypothetical protein	gene	hypothetical protein	chr4	8270878	8271655	+	promoter
3	LOC_Os01g71558	phototropic-responsive NPH3 family protein, putative	gene	phototropic-responsive NPH3 family protein, putative	chr1	41453333	41453998	-	promoter
3	LOC_Os01g07420	hydrolase, alpha/beta fold family protein, putative, expressed	gene	hydrolase, alpha/beta fold family protein, putative, expressed	chr1	3515658	3518175	-	promoter
3	LOC_Os06g08014	hydroxylase, putative	gene	hydroxylase, putative	chr6	3883193	3884868	+	promoter
3	LOC_Os04g42040	expressed protein	gene	expressed protein	chr4	24712487	24715617	+	promoter
3	LOC_Os07g37840	lipase, putative, expressed	gene	lipase, putative, expressed	chr7	22692164	22693499	-	promoter
3	LOC_Os01g31629	expressed protein	gene	expressed protein	chr1	17308252	17324714	-	promoter
3	LOC_Os07g28830	hypothetical protein	gene	hypothetical protein	chr7	16874585	16876015	-	promoter
3	LOC_Os03g02685	lysM domain containing protein, putative, expressed	gene	lysM domain containing protein, putative, expressed	chr3	1001392	1002084	+	promoter
3	LOC_Os08g41470	proteophosphoglycan ppg4, putative, expressed	gene	proteophosphoglycan ppg4, putative, expressed	chr8	26189977	26193389	-	promoter
3	LOC_Os09g03700	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr9	1864906	1868249	+	promoter
3	LOC_Os02g07850	DUF630/DUF632 domains containing protein, putative	gene	DUF630/DUF632 domains containing protein, putative	chr2	4112945	4115853	-	promoter
3	LOC_Os01g11590	uncharacterized protein HI0077, putative, expressed	gene	uncharacterized protein HI0077, putative, expressed	chr1	6252721	6256198	+	promoter
3	LOC_Os09g20024	expressed protein	gene	expressed protein	chr9	11993004	11993798	-	promoter
3	LOC_Os03g43400	OsIAA11 - Auxin-responsive Aux/IAA gene family member, expressed	gene	OsIAA11 - Auxin-responsive Aux/IAA gene family member, expressed	chr3	24196728	24200100	-	promoter
3	LOC_Os04g56150	AP2 domain containing protein	gene	AP2 domain containing protein	chr4	33252077	33252646	-	promoter
3	LOC_Os02g26580	hypothetical protein	gene	hypothetical protein	chr2	15606200	15606556	+	promoter
3	LOC_Os12g39220	ZOS12-08 - C2H2 zinc finger protein, expressed	gene	ZOS12-08 - C2H2 zinc finger protein, expressed	chr12	24111975	24113217	-	promoter
3	LOC_Os11g01580	sodium/calcium exchanger protein, putative	gene	sodium/calcium exchanger protein, putative	chr11	333096	334289	-	promoter
3	LOC_Os12g36410	transposon protein, putative, Pong sub-class, expressed	gene	transposon protein, putative, Pong sub-class, expressed	chr12	22252003	22253556	+	promoter
3	LOC_Os02g09830	bZIP transcription factor domain containing protein, expressed	gene	bZIP transcription factor domain containing protein, expressed	chr2	5067163	5068039	-	promoter
3	LOC_Os11g38180	OsFBDUF59 - F-box and DUF domain containing protein, expressed	gene	OsFBDUF59 - F-box and DUF domain containing protein, expressed	chr11	22173213	22174883	-	promoter
3	LOC_Os11g37340	OsFBX426 - F-box domain containing protein	gene	OsFBX426 - F-box domain containing protein	chr11	21579517	21580713	+	promoter
3	LOC_Os12g05330	protein of unknown function containing protein, expressed	gene	protein of unknown function containing protein, expressed	chr12	2394804	2396717	-	promoter
3	LOC_Os02g18460	NAM, putative	gene	NAM, putative	chr2	10747493	10749004	-	promoter
3	LOC_Os08g09930	expressed protein	gene	expressed protein	chr8	5734211	5734972	+	promoter
3	LOC_Os11g32910	expressed protein	gene	expressed protein	chr11	18973766	18976464	-	promoter
3	LOC_Os07g28650	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr7	16769806	16771943	+	promoter
3	LOC_Os04g39100	peroxidase precursor, putative, expressed	gene	peroxidase precursor, putative, expressed	chr4	23050660	23052050	-	promoter
3	LOC_Os10g42260	hypothetical protein	gene	hypothetical protein	chr10	22685783	22686633	-	promoter,downstream
3	LOC_Os09g17860	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr9	10926128	10926973	+	promoter,downstream
3	LOC_Os11g40600	expressed protein	gene	expressed protein	chr11	23760116	23761683	-	promoter
3	LOC_Os10g42510	expressed protein	gene	expressed protein	chr10	22852622	22861152	-	promoter
3	LOC_Os05g34950	cysteine-rich receptor-like protein kinase 6 precursor, putative, expressed	gene	cysteine-rich receptor-like protein kinase 6 precursor, putative, expressed	chr5	20698898	20701608	-	promoter
3	LOC_Os12g19190	transposon protein, putative, CACTA, En/Spm sub-class	gene	transposon protein, putative, CACTA, En/Spm sub-class	chr12	11140108	11143097	+	promoter
3	LOC_Os07g32610	expressed protein	gene	expressed protein	chr7	19443185	19444951	-	promoter
3	LOC_Os07g42834	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr7	25651455	25659132	+	promoter
3	LOC_Os11g17300	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr11	9629474	9634042	-	promoter
3	LOC_Os05g29770	hypothetical protein	gene	hypothetical protein	chr5	17156470	17159843	-	promoter
3	LOC_Os02g44340	expressed protein	gene	expressed protein	chr2	26817767	26820004	-	promoter
3	LOC_Os03g08710	THION26 - Plant thionin family protein precursor, expressed	gene	THION26 - Plant thionin family protein precursor, expressed	chr3	4488671	4489554	+	promoter,downstream
3	LOC_Os03g25280	peroxidase precursor, putative, expressed	gene	peroxidase precursor, putative, expressed	chr3	14434798	14436143	-	promoter
3	LOC_Os01g33520	ulp1 protease family, C-terminal catalytic domain containing protein	gene	ulp1 protease family, C-terminal catalytic domain containing protein	chr1	18448950	18452007	-	promoter
3	LOC_Os07g26520	expressed protein	gene	expressed protein	chr7	15280849	15281680	-	promoter
3	LOC_Os06g06910	expressed protein	gene	expressed protein	chr6	3276806	3278183	+	promoter
3	LOC_Os02g45390	RING-H2 finger protein, putative, expressed	gene	RING-H2 finger protein, putative, expressed	chr2	27596451	27600912	+	promoter
3	LOC_Os03g08880	purine permease, putative, expressed	gene	purine permease, putative, expressed	chr3	4597926	4599432	-	promoter
3	LOC_Os02g49280	LTPL50 - Protease inhibitor/seed storage/LTP family protein precursor, putative	gene	LTPL50 - Protease inhibitor/seed storage/LTP family protein precursor, putative	chr2	30111406	30112504	-	promoter
3	LOC_Os09g32025	uroporphyrinogen-III synthase, putative	gene	uroporphyrinogen-III synthase, putative	chr9	19117826	19118728	-	promoter,downstream
3	LOC_Os04g51400	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr4	30254344	30257736	-	promoter
3	LOC_Os02g12300	pectate lyase precursor, putative, expressed	gene	pectate lyase precursor, putative, expressed	chr2	6399355	6402186	-	promoter
3	LOC_Os08g24434	expressed protein	gene	expressed protein	chr8	14757570	14763552	-	promoter
3	LOC_Os01g20850	conserved hypothetical protein	gene	conserved hypothetical protein	chr1	11623228	11623619	-	promoter,downstream
3	LOC_Os01g58620	expressed protein	gene	expressed protein	chr1	33889054	33890683	-	promoter
3	LOC_Os07g13600	expressed protein	gene	expressed protein	chr7	7794992	7795986	-	promoter
3	LOC_Os01g13229	cyclin-A1, putative	gene	cyclin-A1, putative	chr1	7368672	7373369	-	promoter
3	LOC_Os01g53030	expressed protein	gene	expressed protein	chr1	30474210	30474997	-	promoter
3	LOC_Os11g32420	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr11	18671911	18677910	+	promoter
3	LOC_Os10g07592	hypothetical protein	gene	hypothetical protein	chr10	4173508	4174197	-	promoter
3	LOC_Os03g64370	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr3	36377861	36379783	+	promoter,downstream
3	LOC_Os08g40550	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr8	25666025	25670826	-	promoter
3	LOC_Os06g30420	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr6	17576000	17577928	-	promoter
3	LOC_Os02g24100	hypothetical protein	gene	hypothetical protein	chr2	13960068	13960676	+	promoter
3	LOC_Os01g22480	OsFBDUF4 - F-box and DUF domain containing protein, expressed	gene	OsFBDUF4 - F-box and DUF domain containing protein, expressed	chr1	12635354	12639649	-	promoter
3	LOC_Os02g11770	expressed protein	gene	expressed protein	chr2	6078178	6079147	-	promoter,downstream
3	LOC_Os07g26990	hypothetical protein	gene	hypothetical protein	chr7	15623596	15624795	-	promoter
3	LOC_Os03g55670	expressed protein	gene	expressed protein	chr3	31687679	31689635	-	promoter
3	LOC_Os04g59330	expressed protein	gene	expressed protein	chr4	35092484	35094035	+	promoter
3	LOC_Os05g23450	expressed protein	gene	expressed protein	chr5	13353582	13356538	-	promoter
3	LOC_Os01g03500	expressed protein	gene	expressed protein	chr1	1409987	1412093	-	promoter
3	LOC_Os09g21802	hypothetical protein	gene	hypothetical protein	chr9	13208613	13210692	-	promoter
3	LOC_Os01g12740	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr1	7047273	7049877	+	promoter
3	LOC_Os11g07922	short chain dehydrogenase/reductase protein, putative, expressed	gene	short chain dehydrogenase/reductase protein, putative, expressed	chr11	4090467	4093063	+	promoter,downstream
3	LOC_Os12g44160	oxidoreductase, putative, expressed	gene	oxidoreductase, putative, expressed	chr12	27360807	27364795	+	promoter,downstream
3	LOC_Os10g34330	hypothetical protein	gene	hypothetical protein	chr10	18233555	18235183	+	promoter
3	LOC_Os06g22340	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr6	12966303	12968112	-	promoter
3	LOC_Os06g50590	hypothetical protein	gene	hypothetical protein	chr6	30618789	30619222	+	promoter
3	LOC_Os06g48310	RNA recognition motif containing protein	gene	RNA recognition motif containing protein	chr6	29210703	29211002	+	promoter
3	LOC_Os02g27500	Leucine Rich Repeat family protein, expressed	gene	Leucine Rich Repeat family protein, expressed	chr2	16264148	16266679	-	promoter
3	LOC_Os04g52530	heavy metal-associated domain containing protein, expressed	gene	heavy metal-associated domain containing protein, expressed	chr4	31045818	31046858	+	promoter
3	LOC_Os02g51799	MYB family transcription factor, putative	gene	MYB family transcription factor, putative	chr2	31718951	31720452	-	promoter
3	LOC_Os03g57180	hypothetical protein	gene	hypothetical protein	chr3	32596271	32596642	+	promoter
3	LOC_Os05g11790	CAMK_KIN1/SNF1/Nim1_like.19 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_KIN1/SNF1/Nim1_like.19 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr5	6700992	6702875	-	promoter
3	LOC_Os07g49310	omega-3 fatty acid desaturase, chloroplast precursor, putative, expressed	gene	omega-3 fatty acid desaturase, chloroplast precursor, putative, expressed	chr7	29530235	29533143	+	promoter
3	LOC_Os12g04204	expressed protein	gene	expressed protein	chr12	1771554	1773716	-	promoter
3	LOC_Os12g03090	ribosomal protein, putative, expressed	gene	ribosomal protein, putative, expressed	chr12	1168472	1169473	-	promoter
3	LOC_Os01g11270	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr1	6030025	6031833	-	promoter
3	LOC_Os08g32610	armadillo/beta-catenin repeat family protein, putative, expressed	gene	armadillo/beta-catenin repeat family protein, putative, expressed	chr8	20193017	20194774	-	promoter
3	LOC_Os01g01950	hypothetical protein	gene	hypothetical protein	chr1	511840	512502	+	promoter,downstream
3	LOC_Os03g62670	expressed protein	gene	expressed protein	chr3	35460499	35462683	+	promoter,downstream
3	LOC_Os06g49710	expressed protein	gene	expressed protein	chr6	30073602	30074501	+	promoter
3	LOC_Os10g38910	expressed protein	gene	expressed protein	chr10	20657776	20659479	-	promoter
3	LOC_Os09g36840	conserved hypothetical protein	gene	conserved hypothetical protein	chr9	21245498	21246097	+	promoter
3	LOC_Os04g42310	B4-BTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed	gene	B4-BTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed	chr4	24849831	24851443	-	promoter
3	LOC_Os08g10760	hypothetical protein	gene	hypothetical protein	chr8	6324314	6325844	+	promoter
3	LOC_Os01g01680	expressed protein	gene	expressed protein	chr1	331667	332689	-	promoter
3	LOC_Os02g13860	hypothetical protein	gene	hypothetical protein	chr2	7513963	7514649	-	promoter
3	LOC_Os06g33210	UAA transporter family domain containing protein, expressed	gene	UAA transporter family domain containing protein, expressed	chr6	19337480	19343726	-	promoter
3	LOC_Os01g01302	shikimate kinase, putative, expressed	gene	shikimate kinase, putative, expressed	chr1	144577	146852	+	promoter
3	LOC_Os02g10930	hypothetical protein	gene	hypothetical protein	chr2	5806604	5806954	+	promoter
3	LOC_Os03g23040	hypothetical protein	gene	hypothetical protein	chr3	13309950	13311613	+	promoter
3	LOC_Os01g68090	harpin-induced protein 1 domain containing protein	gene	harpin-induced protein 1 domain containing protein	chr1	39581312	39582679	-	promoter
3	LOC_Os05g32370	ATP-dependent RNA helicase, putative, expressed	gene	ATP-dependent RNA helicase, putative, expressed	chr5	18809801	18813383	-	promoter
3	LOC_Os09g32470	membrane protein, putative, expressed	gene	membrane protein, putative, expressed	chr9	19384195	19386611	-	promoter
3	LOC_Os12g02610	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr12	898490	899104	-	promoter
3	LOC_Os02g43990	expressed protein	gene	expressed protein	chr2	26562905	26564459	+	promoter
3	LOC_Os01g57750	hypothetical protein	gene	hypothetical protein	chr1	33395760	33396669	+	promoter
3	LOC_Os09g32230	vignain precursor, putative, expressed	gene	vignain precursor, putative, expressed	chr9	19238833	19240327	-	promoter,downstream
3	LOC_Os02g37970	DUF581 domain containing protein, expressed	gene	DUF581 domain containing protein, expressed	chr2	22936547	22937953	-	promoter
3	LOC_Os08g44250	fiber protein Fb14, putative	gene	fiber protein Fb14, putative	chr8	27854219	27855501	+	promoter,downstream
3	LOC_Os05g49210	OsWRKY43 - Superfamily of TFs having WRKY and zinc finger domains, expressed	gene	OsWRKY43 - Superfamily of TFs having WRKY and zinc finger domains, expressed	chr5	28175917	28178396	+	promoter,downstream
3	LOC_Os07g09470	ATPase, putative, expressed	gene	ATPase, putative, expressed	chr7	4997820	4999710	+	promoter
3	LOC_Os08g08084	expressed protein	gene	expressed protein	chr8	4591002	4591883	-	promoter
3	LOC_Os01g52890	expressed protein	gene	expressed protein	chr1	30411783	30412530	-	promoter
3	LOC_Os05g47640	threonine synthase, chloroplast precursor, putative, expressed	gene	threonine synthase, chloroplast precursor, putative, expressed	chr5	27227914	27229941	+	promoter,downstream
3	LOC_Os07g47050	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr7	28125426	28126668	-	promoter
3	LOC_Os04g21860	transposon protein, putative, Pong sub-class, expressed	gene	transposon protein, putative, Pong sub-class, expressed	chr4	12376136	12378040	+	promoter
3	LOC_Os01g41220	DUF538 domain containing protein, putative, expressed	gene	DUF538 domain containing protein, putative, expressed	chr1	23331962	23336550	+	promoter
3	LOC_Os06g13830	endoglucanase, putative, expressed	gene	endoglucanase, putative, expressed	chr6	7670256	7673779	-	promoter
3	LOC_Os07g49080	COBRA-like protein 7 precursor, putative, expressed	gene	COBRA-like protein 7 precursor, putative, expressed	chr7	29381732	29384104	-	promoter
3	LOC_Os01g52650	POEI44 - Pollen Ole e I allergen and extensin family protein precursor, expressed	gene	POEI44 - Pollen Ole e I allergen and extensin family protein precursor, expressed	chr1	30262338	30263336	-	promoter
3	LOC_Os01g73770	dehydration-responsive element-binding protein, putative, expressed	gene	dehydration-responsive element-binding protein, putative, expressed	chr1	42726382	42727319	+	promoter
3	LOC_Os03g57320	expp1 protein precursor, putative, expressed	gene	expp1 protein precursor, putative, expressed	chr3	32689328	32691771	-	promoter
3	LOC_Os01g68080	harpin-induced protein 1 domain containing protein	gene	harpin-induced protein 1 domain containing protein	chr1	39579452	39580362	-	promoter
3	LOC_Os03g10980	conserved hypothetical protein	gene	conserved hypothetical protein	chr3	5638952	5642559	+	promoter
3	LOC_Os06g03710	DELLA protein SLR1, putative, expressed	gene	DELLA protein SLR1, putative, expressed	chr6	1464500	1467601	-	promoter
3	LOC_Os02g49340	nitrate-induced NOI protein, putative, expressed	gene	nitrate-induced NOI protein, putative, expressed	chr2	30149050	30150552	-	promoter
3	LOC_Os04g14150	dehydration response related protein, putative, expressed	gene	dehydration response related protein, putative, expressed	chr4	7909036	7910573	+	promoter
3	LOC_Os08g39830	ethylene-insensitive 3, putative, expressed	gene	ethylene-insensitive 3, putative, expressed	chr8	25208779	25212083	+	promoter
3	LOC_Os01g17050	VQ domain containing protein, putative, expressed	gene	VQ domain containing protein, putative, expressed	chr1	9768991	9770013	-	promoter
3	LOC_Os12g09620	expressed protein	gene	expressed protein	chr12	5069755	5070517	-	promoter
3	LOC_Os10g40824	hypothetical protein	gene	hypothetical protein	chr10	21881994	21884012	+	promoter
3	LOC_Os01g51130	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr1	29368703	29375078	-	promoter
3	LOC_Os03g24230	conserved hypothetical protein	gene	conserved hypothetical protein	chr3	13787991	13788607	-	promoter
3	LOC_Os04g56080	S-locus-like receptor protein kinase, putative, expressed	gene	S-locus-like receptor protein kinase, putative, expressed	chr4	33214453	33216999	-	promoter
3	LOC_Os01g39970	protein kinase domain containing protein, putative, expressed	gene	protein kinase domain containing protein, putative, expressed	chr1	22537943	22541183	+	promoter
3	LOC_Os11g32490	expressed protein	gene	expressed protein	chr11	18708837	18713416	-	promoter
3	LOC_Os04g57300	phosphatidylinositol 3- and 4-kinase family protein, putative, expressed	gene	phosphatidylinositol 3- and 4-kinase family protein, putative, expressed	chr4	33929014	33931851	-	promoter
3	LOC_Os10g29320	speckle-type POZ protein, putative, expressed	gene	speckle-type POZ protein, putative, expressed	chr10	15177523	15179667	+	promoter
3	LOC_Os12g02070	expressed protein	gene	expressed protein	chr12	615624	616637	-	promoter
3	LOC_Os04g49600	hypothetical protein	gene	hypothetical protein	chr4	29396476	29397632	-	promoter,downstream
3	LOC_Os01g33460	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr1	18424399	18429721	+	promoter
3	LOC_Os10g03580	hypothetical protein	gene	hypothetical protein	chr10	1546820	1550062	-	promoter
3	LOC_Os01g52370	expressed protein	gene	expressed protein	chr1	30085292	30087893	-	promoter
3	LOC_Os11g01180	ulp1 protease family protein, putative, expressed	gene	ulp1 protease family protein, putative, expressed	chr11	106194	107210	-	promoter
3	LOC_Os12g25210	signal peptidase complex subunit 1, putative	gene	signal peptidase complex subunit 1, putative	chr12	14500672	14501244	-	promoter
3	LOC_Os05g45090	anthocyanidin 5,3-O-glucosyltransferase, putative, expressed	gene	anthocyanidin 5,3-O-glucosyltransferase, putative, expressed	chr5	26133608	26135464	+	promoter
3	LOC_Os07g47610	transposon protein, putative, Ac/Ds sub-class	gene	transposon protein, putative, Ac/Ds sub-class	chr7	28461683	28466836	-	promoter,downstream
3	LOC_Os12g08150	conserved hypothetical protein	gene	conserved hypothetical protein	chr12	4167848	4168426	-	promoter
3	LOC_Os10g33774	leucoanthocyanidin reductase, putative, expressed	gene	leucoanthocyanidin reductase, putative, expressed	chr10	17802191	17806239	-	promoter
3	LOC_Os12g26070	transposon protein, putative, CACTA, En/Spm sub-class	gene	transposon protein, putative, CACTA, En/Spm sub-class	chr12	15138429	15143628	-	promoter
3	LOC_Os04g44924	short-chain dehydrogenase/reductase, putative, expressed	gene	short-chain dehydrogenase/reductase, putative, expressed	chr4	26398370	26400088	+	promoter
3	LOC_Os08g40840	exo70 exocyst complex subunit, putative	gene	exo70 exocyst complex subunit, putative	chr8	25842674	25845268	-	promoter,downstream
3	LOC_Os03g18530	ECAGL1 - ECA1 gametogenesis related family protein precursor, expressed	gene	ECAGL1 - ECA1 gametogenesis related family protein precursor, expressed	chr3	10379006	10379680	+	promoter
3	LOC_Os09g39630	conserved hypothetical protein	gene	conserved hypothetical protein	chr9	22741663	22742696	-	promoter
3	LOC_Os03g52258	hypothetical protein	gene	hypothetical protein	chr3	30006915	30007234	-	promoter
3	LOC_Os07g36630	CSLF8 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed	gene	CSLF8 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed	chr7	21909223	21914291	-	promoter
3	LOC_Os06g02110	OsFBX182 - F-box domain containing protein, expressed	gene	OsFBX182 - F-box domain containing protein, expressed	chr6	625259	627836	+	promoter,downstream
3	LOC_Os07g06600	glutaredoxin, putative, expressed	gene	glutaredoxin, putative, expressed	chr7	3202066	3203286	+	promoter
3	LOC_Os01g17030	heat shock protein DnaJ, putative	gene	heat shock protein DnaJ, putative	chr1	9753518	9754773	+	promoter
3	LOC_Os03g19880	conserved hypothetical protein	gene	conserved hypothetical protein	chr3	11177003	11177374	+	promoter
3	LOC_Os05g51520	expressed protein	gene	expressed protein	chr5	29482453	29484153	-	promoter,downstream
3	LOC_Os02g50020	hypothetical protein	gene	hypothetical protein	chr2	30555341	30557543	-	promoter
3	LOC_Os08g17620	hypothetical protein	gene	hypothetical protein	chr8	10771184	10771672	+	promoter
3	LOC_Os07g07270	MBTB13 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed	gene	MBTB13 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed	chr7	3609787	3613404	-	promoter
3	LOC_Os02g12654	expressed protein	gene	expressed protein	chr2	6608061	6611040	+	promoter,downstream
3	LOC_Os01g61630	expressed protein	gene	expressed protein	chr1	35657701	35659994	+	promoter,downstream
3	LOC_Os12g32190	expressed protein	gene	expressed protein	chr12	19400397	19402721	-	promoter
3	LOC_Os03g18970	protein phosphotase protein, putative, expressed	gene	protein phosphotase protein, putative, expressed	chr3	10620618	10624327	-	promoter
3	LOC_Os06g44090	hypothetical protein	gene	hypothetical protein	chr6	26588785	26589682	-	promoter
3	LOC_Os05g40330	auxin efflux carrier component, putative, expressed	gene	auxin efflux carrier component, putative, expressed	chr5	23635159	23638091	-	promoter
3	LOC_Os03g22340	60S ribosomal protein L22-2, putative, expressed	gene	60S ribosomal protein L22-2, putative, expressed	chr3	12796846	12798468	-	promoter
3	LOC_Os05g28520	MRH1, putative, expressed	gene	MRH1, putative, expressed	chr5	16641724	16644874	-	promoter
3	LOC_Os08g13790	conserved hypothetical protein	gene	conserved hypothetical protein	chr8	8219279	8219761	-	promoter
3	LOC_Os06g47850	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr6	28957628	28959420	+	promoter
3	LOC_Os09g38759	dihydroneopterin aldolase, putative, expressed	gene	dihydroneopterin aldolase, putative, expressed	chr9	22272465	22274494	+	promoter,downstream
3	LOC_Os08g40430	mTERF domain containing protein, expressed	gene	mTERF domain containing protein, expressed	chr8	25585338	25587880	-	promoter,downstream
3	LOC_Os11g42360	conserved hypothetical protein	gene	conserved hypothetical protein	chr11	25031680	25032367	+	promoter
3	LOC_Os08g43815	expressed protein	gene	expressed protein	chr8	27654176	27658371	-	promoter
3	LOC_Os02g53820	endoglucanase, putative, expressed	gene	endoglucanase, putative, expressed	chr2	32956093	32958651	+	promoter
3	LOC_Os06g23700	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr6	13844396	13849667	+	promoter
3	LOC_Os02g35460	ZOS2-10 - C2H2 zinc finger protein	gene	ZOS2-10 - C2H2 zinc finger protein	chr2	21309298	21310064	+	promoter,downstream
3	LOC_Os10g33862	expressed protein	gene	expressed protein	chr10	17902368	17903651	+	promoter
3	LOC_Os03g51390	expressed protein	gene	expressed protein	chr3	29394990	29396155	-	promoter
3	LOC_Os03g26500	expressed protein	gene	expressed protein	chr3	15130035	15130949	-	promoter
3	LOC_Os09g37430	OsSAUR48 - Auxin-responsive SAUR gene family member	gene	OsSAUR48 - Auxin-responsive SAUR gene family member	chr9	21593851	21594536	+	promoter
3	LOC_Os09g33870	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr9	19996519	19999313	+	promoter
3	LOC_Os05g34300	hypothetical protein	gene	hypothetical protein	chr5	20244231	20244587	-	promoter
3	LOC_Os01g11054	phosphoenolpyruvate carboxylase, putative, expressed	gene	phosphoenolpyruvate carboxylase, putative, expressed	chr1	5898555	5908595	+	promoter
3	LOC_Os08g33440	2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed	gene	2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed	chr8	20856011	20859546	-	promoter
3	LOC_Os12g13445	expressed protein	gene	expressed protein	chr12	7533655	7535427	-	promoter
3	LOC_Os02g08190	CYPRO4, putative, expressed	gene	CYPRO4, putative, expressed	chr2	4334583	4338099	-	promoter,downstream
3	LOC_Os03g07810	expressed protein	gene	expressed protein	chr3	3973953	3976411	+	promoter,downstream
3	LOC_Os02g01530	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	304089	304849	-	promoter
3	LOC_Os04g33910	hypothetical protein	gene	hypothetical protein	chr4	20363992	20367035	+	promoter
3	LOC_Os06g35950	conserved hypothetical protein	gene	conserved hypothetical protein	chr6	20981677	20982251	-	promoter
3	LOC_Os04g22280	hypothetical protein	gene	hypothetical protein	chr4	12604006	12604233	+	promoter
3	LOC_Os04g46200	oleosin, putative, expressed	gene	oleosin, putative, expressed	chr4	27176951	27177819	-	promoter
3	LOC_Os05g33320	expressed protein	gene	expressed protein	chr5	19468671	19470865	-	promoter
3	LOC_Os06g11610	heat shock 22 kDa protein, mitochondrial precursor, putative, expressed	gene	heat shock 22 kDa protein, mitochondrial precursor, putative, expressed	chr6	6151019	6152439	-	promoter
3	LOC_Os03g58410	prenylated rab acceptor, putative, expressed	gene	prenylated rab acceptor, putative, expressed	chr3	33274741	33275433	-	promoter
3	LOC_Os02g38930	cytochrome P450 71D7, putative	gene	cytochrome P450 71D7, putative	chr2	23525523	23527408	-	promoter
3	LOC_Os05g23270	hypothetical protein	gene	hypothetical protein	chr5	13228923	13230469	-	promoter
3	LOC_Os02g54590	serine threonine kinase, putative, expressed	gene	serine threonine kinase, putative, expressed	chr2	33428220	33433345	+	promoter
3	LOC_Os11g04970	hypothetical protein	gene	hypothetical protein	chr11	2124964	2125458	-	promoter
3	LOC_Os03g48870	expressed protein	gene	expressed protein	chr3	27829432	27830384	+	promoter
3	LOC_Os04g39140	acetyltransferase, GNAT family, putative, expressed	gene	acetyltransferase, GNAT family, putative, expressed	chr4	23090368	23092316	-	promoter
3	LOC_Os07g12550	hypothetical protein	gene	hypothetical protein	chr7	7162154	7164296	-	promoter
3	LOC_Os08g42430	membrane associated DUF588 domain containing protein, putative, expressed	gene	membrane associated DUF588 domain containing protein, putative, expressed	chr8	26789125	26789809	+	promoter
3	LOC_Os10g33634	unknown	gene	unknown	chr10	17660184	17660291	+	promoter,downstream
3	LOC_Os04g40940	mitotic spindle checkpoint protein MAD2, putative, expressed	gene	mitotic spindle checkpoint protein MAD2, putative, expressed	chr4	24116302	24118043	-	promoter
3	LOC_Os03g01230	DNA-directed RNA polymerase II subunit RPB9, putative, expressed	gene	DNA-directed RNA polymerase II subunit RPB9, putative, expressed	chr3	147181	148057	+	promoter
3	LOC_Os01g51870	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr1	29819684	29821094	+	promoter
3	LOC_Os11g17550	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr11	9772113	9773075	-	promoter
3	LOC_Os01g49640	LTPL149 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	gene	LTPL149 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	chr1	28536828	28537572	-	promoter,downstream
3	LOC_Os05g50670	hypothetical protein	gene	hypothetical protein	chr5	28984197	28984415	-	promoter
3	LOC_Os07g32960	hypothetical protein	gene	hypothetical protein	chr7	19695406	19695894	+	promoter
3	LOC_Os01g46600	seed maturation protein PM41, putative, expressed	gene	seed maturation protein PM41, putative, expressed	chr1	26531130	26531381	-	promoter,downstream
3	LOC_Os01g64200	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr1	37280128	37284286	+	promoter
3	LOC_Os02g18880	calcineurin B, putative, expressed	gene	calcineurin B, putative, expressed	chr2	11015825	11017805	-	promoter
3	LOC_Os03g60250	membrane associated DUF588 domain containing protein, putative, expressed	gene	membrane associated DUF588 domain containing protein, putative, expressed	chr3	34260353	34261588	-	promoter
3	LOC_Os03g11270	hypothetical protein	gene	hypothetical protein	chr3	5800982	5802106	-	promoter
3	LOC_Os06g05640	conserved hypothetical protein	gene	conserved hypothetical protein	chr6	2550070	2553992	-	promoter,downstream
3	LOC_Os07g36890	OsFBX253 - F-box domain containing protein	gene	OsFBX253 - F-box domain containing protein	chr7	22089931	22092344	-	promoter
3	LOC_Os02g12350	histone deacetylase, putative, expressed	gene	histone deacetylase, putative, expressed	chr2	6424555	6430620	-	promoter
3	LOC_Os10g41950	phosphatidylinositol N-acetylglucosaminyltransferase subunit P, putative, expressed	gene	phosphatidylinositol N-acetylglucosaminyltransferase subunit P, putative, expressed	chr10	22490717	22491542	-	promoter,downstream
3	LOC_Os03g24530	hypothetical protein	gene	hypothetical protein	chr3	13980985	13981308	-	promoter
3	LOC_Os11g01610	prenylated rab acceptor, putative, expressed	gene	prenylated rab acceptor, putative, expressed	chr11	355597	356788	+	promoter,downstream
3	LOC_Os10g41550	beta-amylase, putative, expressed	gene	beta-amylase, putative, expressed	chr10	22252672	22256139	-	promoter
3	LOC_Os06g14280	cysteine-rich repeat secretory protein precursor, putative, expressed	gene	cysteine-rich repeat secretory protein precursor, putative, expressed	chr6	7962880	7966791	-	promoter
3	LOC_Os11g40550	receptor kinase, putative, expressed	gene	receptor kinase, putative, expressed	chr11	23725983	23729165	+	promoter
3	LOC_Os01g02850	hypothetical protein	gene	hypothetical protein	chr1	1000292	1000770	-	promoter
3	LOC_Os12g17920	hypothetical protein	gene	hypothetical protein	chr12	10296940	10298139	+	promoter
3	LOC_Os02g42800	expressed protein	gene	expressed protein	chr2	25724653	25726384	+	promoter
3	LOC_Os09g02660	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr9	1167865	1174665	-	promoter
3	LOC_Os03g62950	expressed protein	gene	expressed protein	chr3	35599391	35600735	-	promoter
3	LOC_Os03g61650	hypothetical protein	gene	hypothetical protein	chr3	34938711	34939805	+	promoter
3	LOC_Os01g51170	glycylpeptide N-tetradecanoyltransferase 1, putative, expressed	gene	glycylpeptide N-tetradecanoyltransferase 1, putative, expressed	chr1	29411151	29412927	+	promoter,downstream
3	LOC_Os09g37320	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr9	21558741	21563666	+	promoter
3	LOC_Os06g36810	expressed protein	gene	expressed protein	chr6	21684521	21684925	-	promoter
3	LOC_Os02g06850	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	3458251	3458631	+	promoter
3	LOC_Os01g45470	expressed protein	gene	expressed protein	chr1	25799624	25800199	-	promoter
3	LOC_Os12g29300	CESA10 - cellulose synthase, expressed	gene	CESA10 - cellulose synthase, expressed	chr12	17361289	17362357	-	promoter
3	LOC_Os07g41200	expressed protein	gene	expressed protein	chr7	24663174	24668330	-	promoter
3	LOC_Os03g48050	RNA methyltransferase, TrmH family protein, putative, expressed	gene	RNA methyltransferase, TrmH family protein, putative, expressed	chr3	27307326	27309228	+	promoter
3	LOC_Os03g46470	metal cation transporter, putative, expressed	gene	metal cation transporter, putative, expressed	chr3	26279204	26285071	-	promoter,downstream
3	LOC_Os01g12381	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr1	6763450	6764888	-	promoter,downstream
3	LOC_Os02g13900	BES1/BZR1 homolog protein, putative, expressed	gene	BES1/BZR1 homolog protein, putative, expressed	chr2	7548246	7551644	-	promoter
3	LOC_Os02g58360	expressed protein	gene	expressed protein	chr2	35687740	35693548	-	promoter
3	LOC_Os11g16440	hypothetical protein	gene	hypothetical protein	chr11	9089981	9090836	-	promoter
3	LOC_Os03g25410	hypothetical protein	gene	hypothetical protein	chr3	14529485	14529997	-	promoter
3	LOC_Os08g05580	aquaporin protein, putative, expressed	gene	aquaporin protein, putative, expressed	chr8	2982744	2985765	+	promoter
3	LOC_Os09g37530	hypothetical protein	gene	hypothetical protein	chr9	21636693	21637462	-	promoter
3	LOC_Os01g42780	cysteine proteinase EP-B 2 precursor, putative	gene	cysteine proteinase EP-B 2 precursor, putative	chr1	24342474	24344129	-	promoter
3	LOC_Os03g19900	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr3	11182934	11188103	-	promoter
3	LOC_Os01g36620	pectate lyase family protein, expressed	gene	pectate lyase family protein, expressed	chr1	20316817	20318333	-	promoter
3	LOC_Os06g30720	hypothetical protein	gene	hypothetical protein	chr6	17815958	17816682	+	promoter
3	LOC_Os01g48400	hypothetical protein	gene	hypothetical protein	chr1	27739635	27739856	+	promoter
3	LOC_Os02g26970	hypothetical protein	gene	hypothetical protein	chr2	15828555	15829232	+	promoter
3	LOC_Os06g07640	myb-like DNA-binding domain, SHAQKYF class family protein	gene	myb-like DNA-binding domain, SHAQKYF class family protein	chr6	3695118	3696877	-	promoter
3	LOC_Os03g57569	expressed protein	gene	expressed protein	chr3	32817866	32821415	-	promoter,downstream
3	LOC_Os07g38980	hypothetical protein	gene	hypothetical protein	chr7	23365796	23369831	-	promoter,downstream
3	LOC_Os12g40869	unknown	gene	unknown	chr12	25269880	25270942	-	promoter
3	LOC_Os05g32690	hypothetical protein	gene	hypothetical protein	chr5	19074735	19075055	-	promoter
3	LOC_Os02g04570	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	2041370	2044121	+	promoter
3	LOC_Os09g24180	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr9	14355710	14356206	-	promoter
3	LOC_Os08g09220	OsFBX262 - F-box domain containing protein	gene	OsFBX262 - F-box domain containing protein	chr8	5344888	5346224	-	promoter
3	LOC_Os07g42810	adaptor complexes medium subunit family domain containing protein, expressed	gene	adaptor complexes medium subunit family domain containing protein, expressed	chr7	25639853	25644868	+	promoter,downstream
3	LOC_Os08g45190	PGR5, putative, expressed	gene	PGR5, putative, expressed	chr8	28375056	28376207	+	promoter
3	LOC_Os04g46630	expansin precursor, putative, expressed	gene	expansin precursor, putative, expressed	chr4	27460458	27462380	+	promoter
3	LOC_Os12g38600	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr12	23680094	23682274	+	promoter
3	LOC_Os08g23940	hypothetical protein	gene	hypothetical protein	chr8	14480743	14481652	-	promoter
3	LOC_Os08g01590	expressed protein	gene	expressed protein	chr8	351086	352832	-	promoter
3	LOC_Os03g04190	cytochrome P450, putative	gene	cytochrome P450, putative	chr3	1919039	1920892	-	promoter
3	LOC_Os04g41920	protein FAM133, putative, expressed	gene	protein FAM133, putative, expressed	chr4	24656164	24658572	-	promoter
3	LOC_Os11g06400	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr11	3077964	3085886	-	promoter
3	LOC_Os03g05550	hypothetical protein	gene	hypothetical protein	chr3	2762460	2763152	-	promoter
3	LOC_Os07g18130	hypothetical protein	gene	hypothetical protein	chr7	10738154	10742919	+	promoter
3	LOC_Os10g41220	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr10	22065402	22070210	+	promoter
3	LOC_Os11g28310	P21-Rho-binding domain containing protein, putative, expressed	gene	P21-Rho-binding domain containing protein, putative, expressed	chr11	15816550	15817598	+	promoter
3	LOC_Os08g13650	hypothetical protein	gene	hypothetical protein	chr8	8118674	8122234	+	promoter
3	LOC_Os01g45400	ubiquitin family protein, putative	gene	ubiquitin family protein, putative	chr1	25766126	25766590	+	promoter
3	LOC_Os04g52152	unknown	gene	unknown	chr4	30797386	30798940	-	promoter
3	LOC_Os07g08150	early light-induced protein, chloroplast precursor, putative, expressed	gene	early light-induced protein, chloroplast precursor, putative, expressed	chr7	4142341	4143574	+	promoter
3	LOC_Os07g08060	transmembrane BAX inhibitor motif-containing protein, putative, expressed	gene	transmembrane BAX inhibitor motif-containing protein, putative, expressed	chr7	4086455	4087972	-	promoter,downstream
3	LOC_Os03g20490	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr3	11602832	11607152	-	promoter
3	LOC_Os10g35480	lanC-like protein 2, putative, expressed	gene	lanC-like protein 2, putative, expressed	chr10	18915262	18917539	+	promoter,downstream
3	LOC_Os03g63110	prefoldin, putative, expressed	gene	prefoldin, putative, expressed	chr3	35666152	35669732	-	promoter
3	LOC_Os04g51450	glycosyl hydrolases family 16, putative, expressed	gene	glycosyl hydrolases family 16, putative, expressed	chr4	30288242	30290038	-	promoter
3	LOC_Os03g04440	expressed protein	gene	expressed protein	chr3	2058306	2062346	-	promoter
3	LOC_Os12g10820	expressed protein	gene	expressed protein	chr12	5821581	5828143	+	promoter
3	LOC_Os03g61960	2Fe-2S iron-sulfur cluster binding domain containing protein, expressed	gene	2Fe-2S iron-sulfur cluster binding domain containing protein, expressed	chr3	35115310	35117226	+	promoter,downstream
3	LOC_Os03g11980	beta-hexosaminidase precursor, putative, expressed	gene	beta-hexosaminidase precursor, putative, expressed	chr3	6279174	6281712	-	promoter,downstream
3	LOC_Os06g02350	S-phase kinase-associated protein 1A, putative	gene	S-phase kinase-associated protein 1A, putative	chr6	781722	782180	-	promoter
3	LOC_Os07g41094	unknown	gene	unknown	chr7	24596835	24597359	-	promoter
3	LOC_Os10g07542	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr10	4037833	4040972	+	promoter
3	LOC_Os02g19520	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr2	11404342	11408426	-	promoter
3	LOC_Os02g01460	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr2	269817	271352	-	promoter
3	LOC_Os12g41630	OsFBX463 - F-box domain containing protein, expressed	gene	OsFBX463 - F-box domain containing protein, expressed	chr12	25724951	25726005	-	promoter
3	LOC_Os10g28600	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr10	14825908	14829697	-	promoter
3	LOC_Os01g68840	CRP6 - Cysteine-rich family protein precursor, expressed	gene	CRP6 - Cysteine-rich family protein precursor, expressed	chr1	39997067	39998048	-	promoter
3	LOC_Os09g32140	hypothetical protein	gene	hypothetical protein	chr9	19184484	19185026	-	promoter
3	LOC_Os08g01080	expressed protein	gene	expressed protein	chr8	57581	62384	+	promoter,downstream
3	LOC_Os02g38190	expressed protein	gene	expressed protein	chr2	23099671	23100700	-	promoter,downstream
3	LOC_Os09g21290	expressed protein	gene	expressed protein	chr9	12846730	12847958	-	promoter
3	LOC_Os02g04280	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr2	1889869	1890192	+	promoter
3	LOC_Os01g54870	60S ribosomal protein L18a, putative, expressed	gene	60S ribosomal protein L18a, putative, expressed	chr1	31558165	31559792	-	promoter,downstream
3	LOC_Os03g15490	hypothetical protein	gene	hypothetical protein	chr3	8505959	8506809	-	promoter
3	LOC_Os01g29450	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr1	16503502	16509917	+	promoter,downstream
3	LOC_Os05g03500	expressed protein	gene	expressed protein	chr5	1478055	1482674	-	promoter
3	LOC_Os07g47660	expressed protein	gene	expressed protein	chr7	28478896	28479544	-	promoter
3	LOC_Os01g70680	DEF1 - Defensin and Defensin-like DEFL family	gene	DEF1 - Defensin and Defensin-like DEFL family	chr1	40920856	40921275	+	promoter
3	LOC_Os02g45330	hypothetical protein	gene	hypothetical protein	chr2	27547142	27549614	-	promoter
3	LOC_Os08g06940	expressed protein	gene	expressed protein	chr8	3863078	3864944	+	promoter
3	LOC_Os04g52930	hypothetical protein	gene	hypothetical protein	chr4	31343034	31344393	-	promoter
3	LOC_Os09g38450	expressed protein	gene	expressed protein	chr9	22133979	22136560	-	promoter
3	LOC_Os01g21970	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr1	12331769	12336201	-	promoter
3	LOC_Os02g03460	phosphatidate cytidylyltransferase, putative, expressed	gene	phosphatidate cytidylyltransferase, putative, expressed	chr2	1406098	1409346	-	promoter
3	LOC_Os01g42720	expressed protein	gene	expressed protein	chr1	24299100	24300189	+	promoter,downstream
3	LOC_Os07g39080	expressed protein	gene	expressed protein	chr7	23421656	23422912	-	promoter,downstream
3	LOC_Os04g36880	hypothetical protein	gene	hypothetical protein	chr4	22072011	22072385	+	promoter
3	LOC_Os04g48530	C4-dicarboxylate transporter/malic acid transport protein domain containing protein, expressed	gene	C4-dicarboxylate transporter/malic acid transport protein domain containing protein, expressed	chr4	28744632	28746893	+	promoter
3	LOC_Os11g02165	LTPL57 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	gene	LTPL57 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	chr11	600273	601028	+	promoter,downstream
3	LOC_Os12g40330	expressed protein	gene	expressed protein	chr12	24940847	24941599	+	promoter,downstream
3	LOC_Os06g11780	MYB family transcription factor, putative	gene	MYB family transcription factor, putative	chr6	6239044	6240173	+	promoter,downstream
3	LOC_Os02g06440	hypothetical protein	gene	hypothetical protein	chr2	3216940	3217809	-	promoter
3	LOC_Os06g05120	expressed protein	gene	expressed protein	chr6	2260652	2262977	-	promoter
3	LOC_Os12g15240	hypothetical protein	gene	hypothetical protein	chr12	8685102	8686364	-	promoter
3	LOC_Os06g50600	bZIP transcription factor domain containing protein, expressed	gene	bZIP transcription factor domain containing protein, expressed	chr6	30619818	30623221	-	promoter
3	LOC_Os07g36210	expressed protein	gene	expressed protein	chr7	21632812	21635613	-	promoter
3	LOC_Os03g58490	DUF593 domain containing protein, expressed	gene	DUF593 domain containing protein, expressed	chr3	33308691	33312613	+	promoter
3	LOC_Os02g53800	hypothetical protein	gene	hypothetical protein	chr2	32949599	32950086	-	promoter
3	LOC_Os01g46390	DUF538 domain containing protein, putative	gene	DUF538 domain containing protein, putative	chr1	26397220	26397630	+	promoter
3	LOC_Os07g25530	hypothetical protein	gene	hypothetical protein	chr7	14612873	14613293	-	promoter,downstream
3	LOC_Os11g14525	expressed protein	gene	expressed protein	chr11	8154544	8155218	-	promoter
3	LOC_Os12g24084	expressed protein	gene	expressed protein	chr12	13700648	13701179	+	promoter
3	LOC_Os07g39790	expressed protein	gene	expressed protein	chr7	23839951	23840833	-	promoter
3	LOC_Os05g14280	RNA-directed DNA polymerase, putative	gene	RNA-directed DNA polymerase, putative	chr5	8017901	8020647	-	promoter
3	LOC_Os10g02509	GAGA-binding protein, putative	gene	GAGA-binding protein, putative	chr10	938291	939377	-	promoter
3	LOC_Os01g59610	KAZ1 - Kazal-type serine protease inhibitor precursor, expressed	gene	KAZ1 - Kazal-type serine protease inhibitor precursor, expressed	chr1	34475278	34476195	+	promoter,downstream
3	LOC_Os01g53650	zinc finger CCCH type family protein, putative, expressed	gene	zinc finger CCCH type family protein, putative, expressed	chr1	30823645	30824626	+	promoter
3	LOC_Os06g12080	mTERF family protein, expressed	gene	mTERF family protein, expressed	chr6	6471152	6472693	-	promoter
3	LOC_Os02g27070	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr2	15910191	15914036	-	promoter
3	LOC_Os09g39430	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr9	22670943	22674960	-	promoter
3	LOC_Os12g35510	conserved hypothetical protein	gene	conserved hypothetical protein	chr12	21563962	21564348	-	promoter
3	LOC_Os01g10680	GIL1, putative, expressed	gene	GIL1, putative, expressed	chr1	5698651	5706758	-	promoter
3	LOC_Os03g63510	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr3	35870411	35875774	-	promoter,downstream
3	LOC_Os04g52504	adhesive/proline-rich protein, putative, expressed	gene	adhesive/proline-rich protein, putative, expressed	chr4	31034709	31035908	-	promoter
3	LOC_Os05g43070	hypothetical protein	gene	hypothetical protein	chr5	24952889	24957894	-	promoter
3	LOC_Os08g05820	monocopper oxidase, putative, expressed	gene	monocopper oxidase, putative, expressed	chr8	3119328	3124525	-	promoter
3	LOC_Os11g33250	expressed protein	gene	expressed protein	chr11	19190502	19192496	+	promoter
3	LOC_Os02g10370	hrpN-interacting protein from Malus, putative	gene	hrpN-interacting protein from Malus, putative	chr2	5464034	5464324	-	promoter,downstream
3	LOC_Os03g48020	expressed protein	gene	expressed protein	chr3	27295148	27297046	+	promoter
3	LOC_Os04g47030	hypothetical protein	gene	hypothetical protein	chr4	27686011	27688324	-	promoter
3	LOC_Os04g48810	hypothetical protein	gene	hypothetical protein	chr4	28928107	28928448	-	promoter
3	LOC_Os12g07690	chalcone synthase, putative, expressed	gene	chalcone synthase, putative, expressed	chr12	3863181	3863606	-	promoter
3	LOC_Os03g22150	hypothetical protein	gene	hypothetical protein	chr3	12691996	12692477	-	promoter
3	LOC_Os08g29600	seed maturation protein PM41, putative, expressed	gene	seed maturation protein PM41, putative, expressed	chr8	18158345	18158901	-	promoter
3	LOC_Os09g33882	expressed protein	gene	expressed protein	chr9	20006443	20007194	+	promoter
3	LOC_Os05g44170	cyclic phosphodiesterase, putative, expressed	gene	cyclic phosphodiesterase, putative, expressed	chr5	25603565	25604812	+	promoter
3	LOC_Os05g41599	unknown	gene	unknown	chr5	24299988	24300408	-	promoter
3	LOC_Os01g07780	embryo-specific 3, putative, expressed	gene	embryo-specific 3, putative, expressed	chr1	3734829	3735828	+	promoter,downstream
3	LOC_Os02g47320	vacuolar ATPase G subunit, putative, expressed	gene	vacuolar ATPase G subunit, putative, expressed	chr2	28892221	28894993	-	promoter
3	LOC_Os03g10420	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr3	5303975	5306365	+	promoter
3	LOC_Os11g04894	expressed protein	gene	expressed protein	chr11	2082955	2083543	-	promoter
3	LOC_Os03g39520	plant protein of unknown function domain containing protein	gene	plant protein of unknown function domain containing protein	chr3	21948981	21951569	-	promoter
3	LOC_Os06g51370	OsSCP38 - Putative Serine Carboxypeptidase homologue	gene	OsSCP38 - Putative Serine Carboxypeptidase homologue	chr6	31108239	31110390	+	promoter
3	LOC_Os02g50220	expressed protein	gene	expressed protein	chr2	30655447	30658484	+	promoter
3	LOC_Os01g63430	hypothetical protein	gene	hypothetical protein	chr1	36749894	36752929	-	promoter
3	LOC_Os03g11780	expressed protein	gene	expressed protein	chr3	6162957	6163602	-	promoter
3	LOC_Os02g11070	3-ketoacyl-CoA synthase, putative, expressed	gene	3-ketoacyl-CoA synthase, putative, expressed	chr2	5930193	5933079	-	promoter
3	LOC_Os06g48600	macrophage migration inhibitory factor, putative, expressed	gene	macrophage migration inhibitory factor, putative, expressed	chr6	29401707	29402743	-	promoter
3	LOC_Os04g08764	avr9/Cf-9 rapidly elicited protein 137, putative, expressed	gene	avr9/Cf-9 rapidly elicited protein 137, putative, expressed	chr4	4765333	4767484	-	promoter
3	LOC_Os06g43150	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr6	25935098	25940004	+	promoter
3	LOC_Os01g53310	hypothetical protein	gene	hypothetical protein	chr1	30633599	30636103	+	promoter
3	LOC_Os03g55290	GASR3 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed	gene	GASR3 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed	chr3	31457725	31458510	-	promoter
3	LOC_Os03g46760	hypothetical protein	gene	hypothetical protein	chr3	26445284	26446816	-	promoter
3	LOC_Os04g48070	homeobox and START domains containing protein, putative, expressed	gene	homeobox and START domains containing protein, putative, expressed	chr4	28415549	28421889	-	promoter
3	LOC_Os02g44480	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr2	26916643	26918340	-	promoter
3	LOC_Os01g57500	hypothetical protein	gene	hypothetical protein	chr1	33223008	33225131	+	promoter
3	LOC_Os03g22780	DVR, putative, expressed	gene	DVR, putative, expressed	chr3	13154518	13156122	-	promoter
3	LOC_Os03g42320	Sec1 family transport protein, putative, expressed	gene	Sec1 family transport protein, putative, expressed	chr3	23543491	23545842	-	promoter
3	LOC_Os06g04410	hypothetical protein	gene	hypothetical protein	chr6	1890152	1891189	-	promoter
3	LOC_Os10g26960	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr10	14124628	14127193	+	promoter
3	LOC_Os01g62660	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr1	36285885	36288600	+	promoter
3	LOC_Os02g51170	expressed protein	gene	expressed protein	chr2	31302554	31303194	-	promoter,downstream
3	LOC_Os02g47030	expressed protein	gene	expressed protein	chr2	28698751	28700345	-	promoter
3	LOC_Os08g24160	invertase/pectin methylesterase inhibitor family protein, putative	gene	invertase/pectin methylesterase inhibitor family protein, putative	chr8	14584777	14585385	+	promoter
3	LOC_Os11g40110	RWP-RK, putative	gene	RWP-RK, putative	chr11	23459903	23462909	-	promoter
3	LOC_Os03g62550	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr3	35406943	35408905	-	promoter
3	LOC_Os11g12350	disease resistance protein, putative, expressed	gene	disease resistance protein, putative, expressed	chr11	6892709	6894519	+	promoter
3	LOC_Os09g33830	solute carrier family 35 member F1, putative, expressed	gene	solute carrier family 35 member F1, putative, expressed	chr9	19970022	19974776	-	promoter
3	LOC_Os03g01140	acyl-activating enzyme 11, putative	gene	acyl-activating enzyme 11, putative	chr3	103550	103979	-	promoter
3	LOC_Os05g49785	unknown	gene	unknown	chr5	28514007	28514214	+	promoter
3	LOC_Os05g43590	serpin domain containing protein, putative	gene	serpin domain containing protein, putative	chr5	25288055	25288993	-	promoter
3	LOC_Os10g17750	hypothetical protein	gene	hypothetical protein	chr10	8914330	8915324	-	promoter
3	LOC_Os02g10090	expressed protein	gene	expressed protein	chr2	5254077	5257593	-	promoter
3	LOC_Os12g02700	harpin-induced protein 1 domain containing protein, expressed	gene	harpin-induced protein 1 domain containing protein, expressed	chr12	943439	944547	-	promoter
3	LOC_Os11g37530	hypothetical protein	gene	hypothetical protein	chr11	21690428	21692577	-	promoter
3	LOC_Os02g49630	tetraspanin family protein, putative, expressed	gene	tetraspanin family protein, putative, expressed	chr2	30324133	30326791	+	promoter
3	LOC_Os07g47370	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr7	28334324	28336605	-	promoter,downstream
3	LOC_Os03g19420	nicotianamine synthase, putative, expressed	gene	nicotianamine synthase, putative, expressed	chr3	10925187	10926668	+	promoter
3	LOC_Os10g25620	no apical meristem protein, expressed	gene	no apical meristem protein, expressed	chr10	13199559	13201717	-	promoter
3	LOC_Os03g55140	transducin family protein, putative, expressed	gene	transducin family protein, putative, expressed	chr3	31375176	31380077	+	promoter
3	LOC_Os02g48690	hypothetical protein	gene	hypothetical protein	chr2	29799417	29802234	+	promoter
3	LOC_Os10g35740	hypothetical protein	gene	hypothetical protein	chr10	19036817	19037118	+	promoter
3	LOC_Os01g23920	hypothetical protein	gene	hypothetical protein	chr1	13458553	13459567	-	promoter
3	LOC_Os07g49050	hypothetical protein	gene	hypothetical protein	chr7	29369555	29370706	-	promoter
3	LOC_Os09g36000	conserved hypothetical protein	gene	conserved hypothetical protein	chr9	20741178	20742293	-	promoter
3	LOC_Os02g08200	zinc finger, C3HC4 type domain containing protein	gene	zinc finger, C3HC4 type domain containing protein	chr2	4341772	4342164	-	promoter
3	LOC_Os02g42970	NAC domain containing protein, putative	gene	NAC domain containing protein, putative	chr2	25853635	25855114	-	promoter
3	LOC_Os06g02230	B3 DNA binding domain containing protein, expressed	gene	B3 DNA binding domain containing protein, expressed	chr6	695035	697259	+	promoter
3	LOC_Os01g56740	OsFBDUF7 - F-box and DUF domain containing protein, expressed	gene	OsFBDUF7 - F-box and DUF domain containing protein, expressed	chr1	32738919	32740556	+	promoter
3	LOC_Os07g43740	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr7	26172601	26173392	+	promoter
3	LOC_Os08g11490	hypothetical protein	gene	hypothetical protein	chr8	6741488	6741883	-	promoter
3	LOC_Os01g59900	expressed protein	gene	expressed protein	chr1	34638571	34641955	-	promoter
3	LOC_Os05g30810	expressed protein	gene	expressed protein	chr5	17820265	17821734	-	promoter
3	LOC_Os08g29740	hypothetical protein	gene	hypothetical protein	chr8	18268556	18271112	-	promoter
3	LOC_Os07g25540	flavin monooxygenase, putative, expressed	gene	flavin monooxygenase, putative, expressed	chr7	14617210	14619508	-	promoter
3	LOC_Os02g01510	lactate/malate dehydrogenase, putative, expressed	gene	lactate/malate dehydrogenase, putative, expressed	chr2	295302	299174	+	promoter
3	LOC_Os08g33860	zinc finger, C3HC4 type, putative, expressed	gene	zinc finger, C3HC4 type, putative, expressed	chr8	21192146	21197417	+	promoter
3	LOC_Os02g10700	OsFBL7 - F-box domain and LRR containing protein, expressed	gene	OsFBL7 - F-box domain and LRR containing protein, expressed	chr2	5628039	5631315	-	promoter
3	LOC_Os02g43912	ceramide kinase-related, putative	gene	ceramide kinase-related, putative	chr2	26501953	26504125	-	promoter
3	LOC_Os02g34970	no apical meristem protein, putative, expressed	gene	no apical meristem protein, putative, expressed	chr2	20966895	20968222	+	promoter,downstream
3	LOC_Os01g49030	expressed protein	gene	expressed protein	chr1	28175699	28176712	+	promoter
3	LOC_Os10g27120	expressed protein	gene	expressed protein	chr10	14221664	14222428	-	promoter
3	LOC_Os05g33440	mTERF domain containing protein, expressed	gene	mTERF domain containing protein, expressed	chr5	19587192	19588588	-	promoter
3	LOC_Os08g42600	retinoblastoma-related protein-like, putative, expressed	gene	retinoblastoma-related protein-like, putative, expressed	chr8	26919480	26925624	-	promoter
3	LOC_Os04g11450	OsFBX118 - F-box domain containing protein, expressed	gene	OsFBX118 - F-box domain containing protein, expressed	chr4	6258023	6259502	-	promoter
3	LOC_Os06g32200	THION8 - Plant thionin family protein precursor, putative	gene	THION8 - Plant thionin family protein precursor, putative	chr6	18750702	18752695	-	promoter
3	LOC_Os02g47770	ZF-HD protein dimerisation region containing protein, expressed	gene	ZF-HD protein dimerisation region containing protein, expressed	chr2	29200163	29202263	-	promoter
3	LOC_Os08g43320	OsRhmbd14 - Putative Rhomboid homologue, expressed	gene	OsRhmbd14 - Putative Rhomboid homologue, expressed	chr8	27373301	27376321	-	promoter
3	LOC_Os08g33750	myb-like DNA-binding domain containing protein, expressed	gene	myb-like DNA-binding domain containing protein, expressed	chr8	21087229	21089395	-	promoter
3	LOC_Os02g35900	thioredoxin, putative, expressed	gene	thioredoxin, putative, expressed	chr2	21557602	21560737	-	promoter
3	LOC_Os01g15270	expressed protein	gene	expressed protein	chr1	8544997	8545894	-	promoter
3	LOC_Os02g12320	retrotransposon protein, putative, Ty3-gypsy subclass, expressed	gene	retrotransposon protein, putative, Ty3-gypsy subclass, expressed	chr2	6406853	6415392	-	promoter
3	LOC_Os10g32980	CESA7 - cellulose synthase, expressed	gene	CESA7 - cellulose synthase, expressed	chr10	17190725	17195386	+	promoter
3	LOC_Os02g29330	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr2	17414731	17419698	-	promoter
3	LOC_Os07g27130	hypothetical protein	gene	hypothetical protein	chr7	15729277	15730219	+	promoter,downstream
3	LOC_Os04g26600	hypothetical protein	gene	hypothetical protein	chr4	15511056	15511492	+	promoter
3	LOC_Os04g57900	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr4	34313432	34315433	-	promoter
3	LOC_Os08g02130	RNA recognition motif containing protein, putative, expressed	gene	RNA recognition motif containing protein, putative, expressed	chr8	703557	712850	-	promoter
3	LOC_Os01g54060	hypothetical protein	gene	hypothetical protein	chr1	31095544	31096151	+	promoter
3	LOC_Os01g44980	peptide deformylase, putative, expressed	gene	peptide deformylase, putative, expressed	chr1	25518948	25522224	-	promoter,downstream
3	LOC_Os11g39290	Leucine Rich Repeat family protein, expressed	gene	Leucine Rich Repeat family protein, expressed	chr11	22928342	22931669	+	promoter
3	LOC_Os03g01550	expressed protein	gene	expressed protein	chr3	347337	351327	-	promoter
3	LOC_Os08g19490	conserved hypothetical protein	gene	conserved hypothetical protein	chr8	11642948	11643624	-	promoter
3	LOC_Os03g50990	expressed protein	gene	expressed protein	chr3	29128397	29128789	+	promoter
3	LOC_Os02g43194	aldehyde dehydrogenase, putative, expressed	gene	aldehyde dehydrogenase, putative, expressed	chr2	26028451	26035553	-	promoter
3	LOC_Os01g15039	pectinesterase, putative, expressed	gene	pectinesterase, putative, expressed	chr1	8446460	8450535	-	promoter
3	LOC_Os08g27550	hypothetical protein	gene	hypothetical protein	chr8	16798931	16799286	+	promoter
3	LOC_Os10g39920	expressed protein	gene	expressed protein	chr10	21288496	21289535	-	promoter
3	LOC_Os01g22080	hypothetical protein	gene	hypothetical protein	chr1	12397116	12400602	+	promoter
3	LOC_Os05g50920	transmembrane amino acid transporter protein, putative, expressed	gene	transmembrane amino acid transporter protein, putative, expressed	chr5	29158759	29161834	+	promoter
3	LOC_Os02g49470	tic20 protein-related, putative, expressed	gene	tic20 protein-related, putative, expressed	chr2	30226173	30226856	+	promoter,downstream
3	LOC_Os02g08310	tubby, putative, expressed	gene	tubby, putative, expressed	chr2	4412797	4415057	-	promoter
3	LOC_Os04g58055	expressed protein	gene	expressed protein	chr4	34394254	34394870	-	promoter
3	LOC_Os08g08070	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr8	4580435	4582494	+	promoter
3	LOC_Os04g51110	WD repeat-containing protein, putative, expressed	gene	WD repeat-containing protein, putative, expressed	chr4	30082705	30085581	+	promoter
3	LOC_Os12g02550	expressed protein	gene	expressed protein	chr12	875293	876652	-	promoter
3	LOC_Os04g40550	expressed protein	gene	expressed protein	chr4	23892670	23894794	-	promoter
3	LOC_Os07g47120	beta-amylase, putative, expressed	gene	beta-amylase, putative, expressed	chr7	28177243	28180586	-	promoter
3	LOC_Os03g14090	armadillo/beta-catenin repeat family protein, putative, expressed	gene	armadillo/beta-catenin repeat family protein, putative, expressed	chr3	7655120	7657443	-	promoter
3	LOC_Os05g30820	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr5	17825020	17828458	-	promoter
3	LOC_Os02g45360	hypothetical protein	gene	hypothetical protein	chr2	27561322	27562314	-	promoter
3	LOC_Os07g33230	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	19858233	19860060	+	promoter
3	LOC_Os03g16020	hsp20/alpha crystallin family protein, putative	gene	hsp20/alpha crystallin family protein, putative	chr3	8832851	8833315	-	promoter
3	LOC_Os04g55130	expressed protein	gene	expressed protein	chr4	32592518	32594017	-	promoter
3	LOC_Os10g26640	LYR motif containing protein, putative	gene	LYR motif containing protein, putative	chr10	13834056	13834328	-	promoter
3	LOC_Os07g09880	expressed protein	gene	expressed protein	chr7	5251484	5253135	-	promoter
3	LOC_Os03g31410	hypothetical protein	gene	hypothetical protein	chr3	17891672	17892965	+	promoter,downstream
3	LOC_Os03g07234	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr3	3699035	3700582	-	promoter
3	LOC_Os04g53060	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr4	31420296	31424764	+	promoter
3	LOC_Os12g04380	GRAS family transcription factor containing protein	gene	GRAS family transcription factor containing protein	chr12	1858794	1860188	-	promoter
3	LOC_Os02g14540	UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein	gene	UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein	chr2	8018191	8019354	-	promoter
3	LOC_Os02g14010	hypothetical protein	gene	hypothetical protein	chr2	7648303	7649327	-	promoter
3	LOC_Os12g06900	citrate-binding protein precursor, putative	gene	citrate-binding protein precursor, putative	chr12	3356303	3357874	-	promoter
3	LOC_Os06g37010	metal cation transporter, putative, expressed	gene	metal cation transporter, putative, expressed	chr6	21823378	21825738	+	promoter,downstream
3	LOC_Os06g14500	hypothetical protein	gene	hypothetical protein	chr6	8146960	8148150	-	promoter
3	LOC_Os01g62910	CRR2, putative, expressed	gene	CRR2, putative, expressed	chr1	36437905	36441901	-	promoter
3	LOC_Os12g44350	actin, putative, expressed	gene	actin, putative, expressed	chr12	27458264	27459654	+	promoter
3	LOC_Os11g29210	resistance-gene-interacting protein, putative, expressed	gene	resistance-gene-interacting protein, putative, expressed	chr11	16472371	16474232	-	promoter
3	LOC_Os01g04040	BBTI11 - Bowman-Birk type bran trypsin inhibitor precursor, putative	gene	BBTI11 - Bowman-Birk type bran trypsin inhibitor precursor, putative	chr1	1756812	1757730	-	promoter
3	LOC_Os02g34090	hypothetical protein	gene	hypothetical protein	chr2	20386995	20387274	-	promoter
3	LOC_Os04g47420	transmembrane amino acid transporter protein, putative, expressed	gene	transmembrane amino acid transporter protein, putative, expressed	chr4	27952597	27954769	-	promoter
3	LOC_Os06g02610	folic acid binding protein, putative	gene	folic acid binding protein, putative	chr6	924433	925154	-	promoter,downstream
3	LOC_Os03g46424	hypothetical protein	gene	hypothetical protein	chr3	26249618	26249866	+	promoter
3	LOC_Os04g46710	thioesterase family protein, putative	gene	thioesterase family protein, putative	chr4	27509360	27511136	-	promoter
3	LOC_Os01g40350	hypothetical protein	gene	hypothetical protein	chr1	22781870	22782472	-	promoter
3	LOC_Os12g35470	expressed protein	gene	expressed protein	chr12	21538008	21539415	-	promoter
3	LOC_Os07g06070	expressed protein	gene	expressed protein	chr7	2942340	2942869	+	promoter
3	LOC_Os01g56610	homocysteine S-methyltransferase protein, putative, expressed	gene	homocysteine S-methyltransferase protein, putative, expressed	chr1	32655620	32657437	-	promoter
3	LOC_Os02g32300	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr2	19067640	19071968	-	promoter
3	LOC_Os09g36720	expressed protein	gene	expressed protein	chr9	21174206	21174657	+	promoter
3	LOC_Os05g35970	expressed protein	gene	expressed protein	chr5	21250676	21251591	-	promoter,downstream
3	LOC_Os06g47360	beta-expansin precursor, putative, expressed	gene	beta-expansin precursor, putative, expressed	chr6	28706250	28707383	-	promoter
3	LOC_Os03g51530	expressed protein	gene	expressed protein	chr3	29472274	29472926	+	promoter
3	LOC_Os01g71608	phototropic-responsive NPH3 family protein, putative	gene	phototropic-responsive NPH3 family protein, putative	chr1	41484306	41484971	-	promoter,downstream
3	LOC_Os02g48122	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr2	29457958	29459791	-	promoter,downstream
3	LOC_Os09g29040	hypothetical protein	gene	hypothetical protein	chr9	17640165	17640861	-	promoter
3	LOC_Os09g35750	hypothetical protein	gene	hypothetical protein	chr9	20559756	20561287	+	promoter
3	LOC_Os04g36740	potassium channel SKOR, putative, expressed	gene	potassium channel SKOR, putative, expressed	chr4	22006923	22012320	-	promoter
3	LOC_Os01g64020	transcription factor, putative, expressed	gene	transcription factor, putative, expressed	chr1	37180173	37187537	-	promoter
3	LOC_Os12g06340	BEL1-like homeodomain transcription factor, putative, expressed	gene	BEL1-like homeodomain transcription factor, putative, expressed	chr12	3028598	3033780	-	promoter
3	LOC_Os08g44660	EF hand family protein, putative, expressed	gene	EF hand family protein, putative, expressed	chr8	28074814	28077093	+	promoter
3	LOC_Os04g44120	collagen triple helix repeat, putative, expressed	gene	collagen triple helix repeat, putative, expressed	chr4	25933373	25933741	+	promoter
3	LOC_Os08g33090	inactive receptor kinase At2g26730 precursor, putative, expressed	gene	inactive receptor kinase At2g26730 precursor, putative, expressed	chr8	20563777	20566660	-	promoter
3	LOC_Os03g19700	plant protein of unknown function domain containing protein, expressed	gene	plant protein of unknown function domain containing protein, expressed	chr3	11080272	11081903	-	promoter,downstream
3	LOC_Os03g58980	Cupin domain containing protein, expressed	gene	Cupin domain containing protein, expressed	chr3	33579335	33580234	+	promoter
3	LOC_Os01g09310	EMB1895, putative, expressed	gene	EMB1895, putative, expressed	chr1	4733012	4736606	-	promoter
3	LOC_Os04g40140	expressed protein	gene	expressed protein	chr4	23700356	23704419	-	promoter
3	LOC_Os03g02390	mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	gene	mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	chr3	846851	848145	-	promoter
3	LOC_Os12g30560	conserved hypothetical protein	gene	conserved hypothetical protein	chr12	18328020	18328565	-	promoter
3	LOC_Os05g09590	expressed protein	gene	expressed protein	chr5	5417128	5417731	+	promoter
3	LOC_Os01g36660	carboxyl-terminal peptidase, putative, expressed	gene	carboxyl-terminal peptidase, putative, expressed	chr1	20337063	20340854	-	promoter
3	LOC_Os03g05240	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr3	2537816	2538979	+	promoter
3	LOC_Os07g47390	C2 domain containing protein, putative, expressed	gene	C2 domain containing protein, putative, expressed	chr7	28338695	28339478	+	promoter
3	LOC_Os11g10770	disease resistance protein RGA3, putative, expressed	gene	disease resistance protein RGA3, putative, expressed	chr11	5907689	5914781	-	promoter
3	LOC_Os01g65250	transposon protein, putative, Pong sub-class, expressed	gene	transposon protein, putative, Pong sub-class, expressed	chr1	37861592	37863708	-	promoter
3	LOC_Os01g59080	expressed protein	gene	expressed protein	chr1	34137282	34138665	-	promoter,downstream
3	LOC_Os12g12180	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr12	6679990	6686756	+	promoter
3	LOC_Os05g41760	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr5	24365306	24366290	-	promoter
3	LOC_Os03g49410	hypothetical protein	gene	hypothetical protein	chr3	28118406	28119192	-	promoter
3	LOC_Os11g44320	hypothetical protein	gene	hypothetical protein	chr11	26313175	26313560	-	promoter
3	LOC_Os09g31260	expressed protein	gene	expressed protein	chr9	18798238	18799124	-	promoter,downstream
3	LOC_Os02g07810	inactive receptor kinase At2g26730 precursor, putative, expressed	gene	inactive receptor kinase At2g26730 precursor, putative, expressed	chr2	4086434	4089162	+	promoter
3	LOC_Os08g40210	expressed protein	gene	expressed protein	chr8	25438508	25438837	-	promoter
3	LOC_Os01g05880	OsFBX1 - F-box domain containing protein, expressed	gene	OsFBX1 - F-box domain containing protein, expressed	chr1	2814175	2815401	-	promoter
3	LOC_Os08g10670	expressed protein	gene	expressed protein	chr8	6280099	6285677	-	promoter
3	LOC_Os11g04680	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr11	1991285	1993060	+	promoter
3	LOC_Os01g53500	RING-H2 finger protein ATL2M, putative, expressed	gene	RING-H2 finger protein ATL2M, putative, expressed	chr1	30729601	30730194	-	promoter
3	LOC_Os01g25250	hypothetical protein	gene	hypothetical protein	chr1	14258309	14259880	+	promoter
3	LOC_Os03g21560	photosystem II 11 kD protein, putative, expressed	gene	photosystem II 11 kD protein, putative, expressed	chr3	12319574	12320516	+	promoter
3	LOC_Os01g68640	expressed protein	gene	expressed protein	chr1	39861127	39861993	+	promoter,downstream
3	LOC_Os01g45650	OsFBX19 - F-box domain containing protein	gene	OsFBX19 - F-box domain containing protein	chr1	25927546	25928682	-	promoter
3	LOC_Os08g09280	hypothetical protein	gene	hypothetical protein	chr8	5389258	5390233	+	promoter
3	LOC_Os02g02490	phytosulfokine receptor precursor, putative, expressed	gene	phytosulfokine receptor precursor, putative, expressed	chr2	884018	888245	+	promoter
3	LOC_Os03g52990	hypothetical protein	gene	hypothetical protein	chr3	30385342	30385764	-	promoter
3	LOC_Os03g17040	expressed protein	gene	expressed protein	chr3	9477403	9478094	+	promoter
3	LOC_Os02g34590	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr2	20732044	20735163	-	promoter
3	LOC_Os06g47870	hypothetical protein	gene	hypothetical protein	chr6	28965760	28966626	-	promoter
3	LOC_Os05g08740	hydrolase, alpha/beta fold family domain containing protein	gene	hydrolase, alpha/beta fold family domain containing protein	chr5	4790935	4791886	-	promoter
3	LOC_Os03g11220	keratin, type I cytoskeletal 9, putative, expressed	gene	keratin, type I cytoskeletal 9, putative, expressed	chr3	5773735	5775275	-	promoter
3	LOC_Os04g58400	tRNA synthetase, putative, expressed	gene	tRNA synthetase, putative, expressed	chr4	34558364	34564658	-	promoter
3	LOC_Os07g41390	hypothetical protein	gene	hypothetical protein	chr7	24799538	24803072	+	promoter
3	LOC_Os10g27310	expressed protein	gene	expressed protein	chr10	14336525	14338682	-	promoter
3	LOC_Os01g54750	conserved hypothetical protein	gene	conserved hypothetical protein	chr1	31501483	31501929	+	promoter
3	LOC_Os09g09450	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr9	5086530	5086994	-	promoter
3	LOC_Os03g62120	heat shock protein DnaJ, putative	gene	heat shock protein DnaJ, putative	chr3	35191553	35194247	+	promoter
3	LOC_Os03g01410	Leucine Rich Repeat family protein	gene	Leucine Rich Repeat family protein	chr3	292668	293916	-	downstream
3	LOC_Os10g28400	MTN26L4 - MtN26 family protein precursor, expressed	gene	MTN26L4 - MtN26 family protein precursor, expressed	chr10	14702515	14704607	-	downstream
3	LOC_Os11g06850	hypothetical protein	gene	hypothetical protein	chr11	3359042	3360008	+	downstream
3	LOC_Os03g48440	expressed protein	gene	expressed protein	chr3	27576938	27580177	-	downstream
3	LOC_Os05g50440	expressed protein	gene	expressed protein	chr5	28849854	28856415	+	downstream
3	LOC_Os01g55960	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr1	32230081	32231529	-	downstream
3	LOC_Os05g36280	histone H3, putative, expressed	gene	histone H3, putative, expressed	chr5	21436860	21437620	-	downstream
3	LOC_Os08g10580	expressed protein	gene	expressed protein	chr8	6225277	6230307	+	downstream
3	LOC_Os10g29260	speckle-type POZ protein, putative	gene	speckle-type POZ protein, putative	chr10	15156927	15157891	+	downstream
3	LOC_Os04g53606	expressed protein	gene	expressed protein	chr4	31772548	31773525	-	downstream
3	LOC_Os08g39010	hypothetical protein	gene	hypothetical protein	chr8	24657077	24658028	+	downstream
3	LOC_Os10g21920	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr10	11218038	11219576	+	downstream
3	LOC_Os03g52500	conserved hypothetical protein	gene	conserved hypothetical protein	chr3	30117797	30118712	-	downstream
3	LOC_Os01g62290	DnaK family protein, putative, expressed	gene	DnaK family protein, putative, expressed	chr1	36038663	36042467	+	downstream
3	LOC_Os05g20304	expressed protein	gene	expressed protein	chr5	11891515	11892687	+	downstream
3	LOC_Os02g46800	hypothetical protein	gene	hypothetical protein	chr2	28567038	28567301	-	downstream
3	LOC_Os06g12490	hypothetical protein	gene	hypothetical protein	chr6	6781327	6782881	-	downstream
3	LOC_Os09g01919	unknown	gene	unknown	chr9	617449	617830	+	downstream
3	LOC_Os01g07620	expressed protein	gene	expressed protein	chr1	3664042	3665046	-	downstream
3	LOC_Os01g66100	gibberellin 20 oxidase 2, putative, expressed	gene	gibberellin 20 oxidase 2, putative, expressed	chr1	38381339	38384461	+	downstream
3	LOC_Os01g69980	TCP family transcription factor, putative, expressed	gene	TCP family transcription factor, putative, expressed	chr1	40476437	40477864	+	downstream
3	LOC_Os01g08810	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr1	4420318	4422107	+	downstream
3	LOC_Os10g41810	hypothetical protein	gene	hypothetical protein	chr10	22431096	22431329	-	downstream
3	LOC_Os05g50250	cinnamoyl-CoA reductase-related, putative, expressed	gene	cinnamoyl-CoA reductase-related, putative, expressed	chr5	28732821	28738593	+	downstream
3	LOC_Os05g04820	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr5	2311371	2315419	+	downstream
3	LOC_Os07g03250	AP2-like ethylene-responsive transcription factor PLETHORA 2, putative, expressed	gene	AP2-like ethylene-responsive transcription factor PLETHORA 2, putative, expressed	chr7	1298598	1303299	+	downstream
3	LOC_Os11g09150	expressed protein	gene	expressed protein	chr11	4888183	4888945	+	downstream
3	LOC_Os04g44760	hypothetical protein	gene	hypothetical protein	chr4	26324935	26325693	-	downstream
3	LOC_Os05g41610	glycosyl hydrolases family 17, putative, expressed	gene	glycosyl hydrolases family 17, putative, expressed	chr5	24308633	24312124	+	downstream
3	LOC_Os02g05390	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr2	2588319	2592400	-	downstream
3	LOC_Os03g25710	hypothetical protein	gene	hypothetical protein	chr3	14715283	14718045	+	downstream
3	LOC_Os04g35210	Leucine Rich Repeat family protein, expressed	gene	Leucine Rich Repeat family protein, expressed	chr4	21224834	21229989	+	downstream
3	LOC_Os01g02760	receptor-like kinase, putative, expressed	gene	receptor-like kinase, putative, expressed	chr1	956907	959626	-	downstream
3	LOC_Os06g37570	expressed protein	gene	expressed protein	chr6	22253357	22254987	+	downstream
3	LOC_Os04g42134	enhancer of rudimentary protein, putative, expressed	gene	enhancer of rudimentary protein, putative, expressed	chr4	24757011	24760083	-	downstream
3	LOC_Os04g45480	heat shock protein STI, putative, expressed	gene	heat shock protein STI, putative, expressed	chr4	26728193	26731639	+	downstream
3	LOC_Os01g03480	expressed protein	gene	expressed protein	chr1	1400504	1402598	-	downstream
3	LOC_Os06g48220	expressed protein	gene	expressed protein	chr6	29170336	29171172	+	downstream
3	LOC_Os02g46810	amino acid transporter, putative	gene	amino acid transporter, putative	chr2	28568142	28568723	-	downstream
3	LOC_Os02g20620	speckle-type POZ protein, putative	gene	speckle-type POZ protein, putative	chr2	12153841	12154626	-	downstream
3	LOC_Os03g02780	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	gene	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	chr3	1079709	1080440	+	downstream
3	LOC_Os03g53100	response regulator receiver domain containing protein, expressed	gene	response regulator receiver domain containing protein, expressed	chr3	30444407	30445743	+	downstream
3	LOC_Os01g73005	expressed protein	gene	expressed protein	chr1	42357039	42359610	-	downstream
3	LOC_Os01g66990	hypothetical protein	gene	hypothetical protein	chr1	38902966	38908555	-	downstream
3	LOC_Os02g49986	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr2	30533906	30535244	-	downstream
3	LOC_Os12g09080	brevis radix, putative	gene	brevis radix, putative	chr12	4745614	4746722	+	downstream
3	LOC_Os07g42250	strictosidine synthase, putative, expressed	gene	strictosidine synthase, putative, expressed	chr7	25286517	25289137	+	downstream
3	LOC_Os08g13210	hypothetical protein	gene	hypothetical protein	chr8	7854093	7856724	+	downstream
3	LOC_Os02g27350	expressed protein	gene	expressed protein	chr2	16105743	16108460	+	downstream
3	LOC_Os01g25230	conserved hypothetical protein	gene	conserved hypothetical protein	chr1	14249189	14250933	+	downstream
3	LOC_Os04g59140	expressed protein	gene	expressed protein	chr4	34996858	34998751	+	downstream
3	LOC_Os03g42380	expressed protein	gene	expressed protein	chr3	23576035	23586219	-	downstream
3	LOC_Os11g07020	fructose-bisphospate aldolase isozyme, putative, expressed	gene	fructose-bisphospate aldolase isozyme, putative, expressed	chr11	3484456	3487562	-	downstream
3	LOC_Os03g12110	homocysteine S-methyltransferase protein, putative, expressed	gene	homocysteine S-methyltransferase protein, putative, expressed	chr3	6353859	6356807	+	downstream
3	LOC_Os06g30430	disease resistance protein RPM1, putative	gene	disease resistance protein RPM1, putative	chr6	17583539	17585353	+	downstream
3	LOC_Os01g23370	hypothetical protein	gene	hypothetical protein	chr1	13136822	13140038	+	downstream
3	LOC_Os10g36670	expressed protein	gene	expressed protein	chr10	19543707	19544528	+	downstream
3	LOC_Os09g36010	expressed protein	gene	expressed protein	chr9	20742675	20743856	+	downstream
3	LOC_Os03g54210	hypothetical protein	gene	hypothetical protein	chr3	31074271	31074738	+	downstream
3	LOC_Os06g47120	expressed protein	gene	expressed protein	chr6	28554634	28556914	-	downstream
3	LOC_Os10g35730	pentatricopeptide repeat domain containing protein, putative, expressed	gene	pentatricopeptide repeat domain containing protein, putative, expressed	chr10	19032641	19034307	+	downstream
3	LOC_Os08g20620	hypothetical protein	gene	hypothetical protein	chr8	12383553	12385791	-	downstream
3	LOC_Os05g48850	no apical meristem protein, putative, expressed	gene	no apical meristem protein, putative, expressed	chr5	27940521	27942357	+	downstream
3	LOC_Os07g41320	COBRA-like protein precursor, putative, expressed	gene	COBRA-like protein precursor, putative, expressed	chr7	24754456	24757231	-	downstream
3	LOC_Os01g36830	polygalacturonase, putative	gene	polygalacturonase, putative	chr1	20485317	20487590	+	downstream
3	LOC_Os06g23350	late embryogenesis abundant protein D-34, putative, expressed	gene	late embryogenesis abundant protein D-34, putative, expressed	chr6	13629102	13630416	+	downstream
3	LOC_Os03g55040	UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed	gene	UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed	chr3	31291751	31293894	+	downstream
3	LOC_Os02g32600	expressed protein	gene	expressed protein	chr2	19316127	19317887	+	downstream
3	LOC_Os04g31730	expressed protein	gene	expressed protein	chr4	18825908	18826837	-	downstream
3	LOC_Os03g05250	hypothetical protein	gene	hypothetical protein	chr3	2540043	2542161	-	downstream
3	LOC_Os11g32450	hypothetical protein	gene	hypothetical protein	chr11	18692250	18693098	+	downstream
3	LOC_Os06g41380	expressed protein	gene	expressed protein	chr6	24804549	24807592	+	downstream
3	LOC_Os08g25250	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr8	15333006	15337761	-	downstream
3	LOC_Os03g05225	expressed protein	gene	expressed protein	chr3	2533158	2534541	+	downstream
3	LOC_Os01g52350	unknown	gene	unknown	chr1	30081782	30083501	+	downstream
3	LOC_Os03g62150	heat shock protein DnaJ, putative	gene	heat shock protein DnaJ, putative	chr3	35200412	35201200	+	downstream
3	LOC_Os07g40920	APO, putative, expressed	gene	APO, putative, expressed	chr7	24489982	24491440	+	downstream
3	LOC_Os10g39610	expressed protein	gene	expressed protein	chr10	21096966	21097711	+	downstream
3	LOC_Os03g10900	disease resistance protein, putative, expressed	gene	disease resistance protein, putative, expressed	chr3	5595830	5598784	-	downstream
3	LOC_Os03g04580	expressed protein	gene	expressed protein	chr3	2138906	2140368	+	downstream
3	LOC_Os07g25430	photosystem I reaction center subunit IV A, chloroplast precursor, putative, expressed	gene	photosystem I reaction center subunit IV A, chloroplast precursor, putative, expressed	chr7	14532311	14533393	+	downstream
3	LOC_Os01g14926	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr1	8363052	8364711	-	downstream
3	LOC_Os02g27610	hypothetical protein	gene	hypothetical protein	chr2	16353155	16353574	-	downstream
3	LOC_Os01g64480	harpin-induced protein 1 domain containing protein, expressed	gene	harpin-induced protein 1 domain containing protein, expressed	chr1	37414772	37415437	-	downstream
3	LOC_Os04g37570	aspartic proteinase nepenthesin precursor, putative, expressed	gene	aspartic proteinase nepenthesin precursor, putative, expressed	chr4	22168590	22170090	+	downstream
3	LOC_Os03g62070	hydrolase, putative, expressed	gene	hydrolase, putative, expressed	chr3	35157576	35161901	+	downstream
3	LOC_Os09g07610	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr9	3814559	3822844	+	downstream
3	LOC_Os10g06110	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr10	3109552	3112315	-	downstream
3	LOC_Os01g66690	ZIP4/SPO22, putative, expressed	gene	ZIP4/SPO22, putative, expressed	chr1	38735501	38738709	+	downstream
3	LOC_Os02g48170	class E vacuolar protein-sorting machinery protein HSE1, putative, expressed	gene	class E vacuolar protein-sorting machinery protein HSE1, putative, expressed	chr2	29475597	29476731	-	downstream
3	LOC_Os08g27020	expressed protein	gene	expressed protein	chr8	16509968	16510492	+	downstream
3	LOC_Os01g34650	unknown	gene	unknown	chr1	19107604	19108491	+	downstream
3	LOC_Os12g12680	transposon protein, putative, Pong sub-class	gene	transposon protein, putative, Pong sub-class	chr12	6980808	6983825	+	downstream
3	LOC_Os09g25490	CESA9 - cellulose synthase, expressed	gene	CESA9 - cellulose synthase, expressed	chr9	15280267	15284909	+	downstream
3	LOC_Os02g40440	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr2	24510505	24512331	+	downstream
3	LOC_Os03g36910	SAM-dependent methyltransferase, putative, expressed	gene	SAM-dependent methyltransferase, putative, expressed	chr3	20483453	20485998	+	downstream
3	LOC_Os08g19130	hypothetical protein	gene	hypothetical protein	chr8	11440680	11441141	+	downstream
3	LOC_Os08g23670	hypothetical protein	gene	hypothetical protein	chr8	14316985	14317787	-	downstream
3	LOC_Os05g36260	soluble inorganic pyrophosphatase, putative, expressed	gene	soluble inorganic pyrophosphatase, putative, expressed	chr5	21429101	21431146	+	downstream
3	LOC_Os01g35840	hypothetical protein	gene	hypothetical protein	chr1	19849442	19850421	+	downstream
3	LOC_Os03g22140	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr3	12688356	12690309	+	downstream
3	LOC_Os09g33710	Os9bglu33 - beta-glucosidase homologue, similar to G. max hydroxyisourate hydrolase, expressed	gene	Os9bglu33 - beta-glucosidase homologue, similar to G. max hydroxyisourate hydrolase, expressed	chr9	19908161	19914000	-	downstream
3	LOC_Os03g31679	annexin A7, putative, expressed	gene	annexin A7, putative, expressed	chr3	18084340	18086153	+	downstream
3	LOC_Os06g10610	hypothetical protein	gene	hypothetical protein	chr6	5521554	5522177	+	downstream
3	LOC_Os06g07140	peptidase, T1 family, putative, expressed	gene	peptidase, T1 family, putative, expressed	chr6	3419508	3420644	+	downstream
3	LOC_Os11g35230	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr11	20192694	20193077	-	downstream
3	LOC_Os03g46730	expressed protein	gene	expressed protein	chr3	26435796	26437453	+	downstream
3	LOC_Os01g57100	expressed protein	gene	expressed protein	chr1	32995718	32998220	+	downstream
3	LOC_Os12g44370	expressed protein	gene	expressed protein	chr12	27478661	27480179	+	downstream
3	LOC_Os04g40475	expressed protein	gene	expressed protein	chr4	23867808	23869337	-	downstream
3	LOC_Os07g43450	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	26012004	26012495	+	downstream
3	LOC_Os07g10370	expressed protein	gene	expressed protein	chr7	5564330	5565234	-	downstream
3	LOC_Os08g44750	auxin-induced protein 5NG4, putative, expressed	gene	auxin-induced protein 5NG4, putative, expressed	chr8	28116018	28118876	+	downstream
3	LOC_Os01g51830	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr1	29796502	29799524	-	downstream
3	LOC_Os12g02940	hypothetical protein	gene	hypothetical protein	chr12	1091580	1091984	-	downstream
3	LOC_Os11g38240	DUF538 domain containing protein, putative, expressed	gene	DUF538 domain containing protein, putative, expressed	chr11	22191064	22191717	+	downstream
3	LOC_Os03g38920	hypothetical protein	gene	hypothetical protein	chr3	21617662	21619901	-	downstream
3	LOC_Os01g52070	potassium channel AKT1, putative, expressed	gene	potassium channel AKT1, putative, expressed	chr1	29942865	29947609	+	downstream
3	LOC_Os04g46560	lactate/malate dehydrogenase, putative, expressed	gene	lactate/malate dehydrogenase, putative, expressed	chr4	27420027	27423208	+	downstream
3	LOC_Os02g50930	RING-H2 finger protein, putative, expressed	gene	RING-H2 finger protein, putative, expressed	chr2	31135212	31136795	+	downstream
3	LOC_Os02g05470	CCT motif family protein, expressed	gene	CCT motif family protein, expressed	chr2	2638415	2642109	+	downstream
3	LOC_Os03g53070	prenylated rab acceptor, putative, expressed	gene	prenylated rab acceptor, putative, expressed	chr3	30429416	30430746	+	downstream
3	LOC_Os03g56890	expressed protein	gene	expressed protein	chr3	32393139	32393905	-	downstream
3	LOC_Os01g02334	expressed protein	gene	expressed protein	chr1	737281	740794	-	downstream
3	LOC_Os01g51030	expressed protein	gene	expressed protein	chr1	29316495	29317114	+	downstream
3	LOC_Os05g45940	hypothetical protein	gene	hypothetical protein	chr5	26561687	26562113	-	downstream
3	LOC_Os03g61670	calreticulin precursor, putative, expressed	gene	calreticulin precursor, putative, expressed	chr3	34944822	34948780	-	downstream
3	LOC_Os07g48560	homeobox domain containing protein, expressed	gene	homeobox domain containing protein, expressed	chr7	29072051	29074695	+	downstream
3	LOC_Os10g07564	hypothetical protein	gene	hypothetical protein	chr10	4097393	4097659	-	downstream
3	LOC_Os07g49140	expressed protein	gene	expressed protein	chr7	29430050	29434270	+	downstream
3	LOC_Os08g35470	exo70 exocyst complex subunit, putative, expressed	gene	exo70 exocyst complex subunit, putative, expressed	chr8	22350555	22352729	+	downstream
3	LOC_Os03g63650	brevis radix, putative	gene	brevis radix, putative	chr3	35946067	35948035	+	downstream
3	LOC_Os05g15340	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr5	8687024	8688132	-	downstream
3	LOC_Os12g35460	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr12	21523971	21534835	+	downstream
3	LOC_Os01g61160	laccase precursor protein, putative, expressed	gene	laccase precursor protein, putative, expressed	chr1	35401752	35404266	+	downstream
3	LOC_Os01g49880	expressed protein	gene	expressed protein	chr1	28649736	28651840	+	downstream
3	LOC_Os10g11130	hypothetical protein	gene	hypothetical protein	chr10	6181646	6182557	+	downstream
3	LOC_Os11g45400	glycerol-3-phosphate acyltransferase, putative, expressed	gene	glycerol-3-phosphate acyltransferase, putative, expressed	chr11	27015290	27018656	+	downstream
3	LOC_Os08g27140	expressed protein	gene	expressed protein	chr8	16578619	16579809	+	downstream
3	LOC_Os12g01730	laccase-23 precursor, putative, expressed	gene	laccase-23 precursor, putative, expressed	chr12	433076	437686	+	downstream
3	LOC_Os03g06670	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	gene	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	chr3	3370370	3371406	+	downstream
3	LOC_Os04g41280	ankyrin repeat domain containing protein, expressed	gene	ankyrin repeat domain containing protein, expressed	chr4	24312477	24320262	+	downstream
3	LOC_Os05g02210	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr5	694389	696374	+	downstream
3	LOC_Os06g50320	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr6	30456263	30462310	-	downstream
3	LOC_Os06g33030	transposon protein, putative, CACTA, En/Spm sub-class	gene	transposon protein, putative, CACTA, En/Spm sub-class	chr6	19225412	19229085	+	downstream
3	LOC_Os01g24430	expressed protein	gene	expressed protein	chr1	13774160	13775628	+	downstream
3	LOC_Os01g02190	aquaporin protein, putative, expressed	gene	aquaporin protein, putative, expressed	chr1	644574	645723	-	downstream
3	LOC_Os05g23700	DNA-binding storekeeper protein-related, putative, expressed	gene	DNA-binding storekeeper protein-related, putative, expressed	chr5	13548945	13550337	+	downstream
3	LOC_Os01g61960	GPR107 precursor, putative	gene	GPR107 precursor, putative	chr1	35867878	35868705	-	downstream
3	LOC_Os09g32570	alcohol dehydrogenase GroES-like domain containing protein, expressed	gene	alcohol dehydrogenase GroES-like domain containing protein, expressed	chr9	19442812	19444429	+	downstream
3	LOC_Os03g13160	non-symbiotic hemoglobin 2, putative, expressed	gene	non-symbiotic hemoglobin 2, putative, expressed	chr3	7099046	7100568	+	downstream
3	LOC_Os04g39960	hypothetical protein	gene	hypothetical protein	chr4	23604278	23605126	+	downstream
3	LOC_Os04g45940	transcription factor like protein, putative, expressed	gene	transcription factor like protein, putative, expressed	chr4	27025027	27026138	+	downstream
3	LOC_Os06g04590	OsSAUR24 - Auxin-responsive SAUR gene family member	gene	OsSAUR24 - Auxin-responsive SAUR gene family member	chr6	1999168	1999570	+	downstream
3	LOC_Os03g12890	aminotransferase domain containing protein, putative, expressed	gene	aminotransferase domain containing protein, putative, expressed	chr3	6946993	6950342	+	downstream
3	LOC_Os01g63580	glycerol-3-phosphate acyltransferase, putative, expressed	gene	glycerol-3-phosphate acyltransferase, putative, expressed	chr1	36862171	36865332	-	downstream
3	LOC_Os02g45974	expressed protein	gene	expressed protein	chr2	28006942	28009495	-	downstream
3	LOC_Os12g43660	receptor-like protein kinase HAIKU2 precursor, putative, expressed	gene	receptor-like protein kinase HAIKU2 precursor, putative, expressed	chr12	27088885	27092651	+	downstream
3	LOC_Os08g01410	phosphate/phosphoenolpyruvate translocator-related protein, putative, expressed	gene	phosphate/phosphoenolpyruvate translocator-related protein, putative, expressed	chr8	267716	271077	-	downstream
3	LOC_Os02g38890	hypothetical protein	gene	hypothetical protein	chr2	23507283	23508246	+	downstream
3	LOC_Os03g04130	AMP-binding domain containing protein, expressed	gene	AMP-binding domain containing protein, expressed	chr3	1884971	1890305	-	downstream
3	LOC_Os02g30110	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr2	17875017	17880558	+	downstream
3	LOC_Os03g52420	expressed protein	gene	expressed protein	chr3	30076998	30077963	+	downstream
3	LOC_Os07g33710	expressed protein	gene	expressed protein	chr7	20148393	20151805	-	downstream
3	LOC_Os05g39670	prenylated rab acceptor, putative, expressed	gene	prenylated rab acceptor, putative, expressed	chr5	23222054	23223178	+	downstream
3	LOC_Os11g40770	expressed protein	gene	expressed protein	chr11	23918900	23919574	+	downstream
3	LOC_Os07g48260	OsWRKY47 - Superfamily of TFs having WRKY and zinc finger domains, expressed	gene	OsWRKY47 - Superfamily of TFs having WRKY and zinc finger domains, expressed	chr7	28827801	28831406	-	downstream
3	LOC_Os01g64860	OsSub11 - Putative Subtilisin homologue, expressed	gene	OsSub11 - Putative Subtilisin homologue, expressed	chr1	37650791	37653340	+	downstream
3	LOC_Os02g48590	expressed protein	gene	expressed protein	chr2	29739677	29741545	+	downstream
3	LOC_Os07g06730	OsFBX216 - F-box domain containing protein	gene	OsFBX216 - F-box domain containing protein	chr7	3284183	3286428	+	downstream
3	LOC_Os07g02290	OsFBX208 - F-box domain containing protein	gene	OsFBX208 - F-box domain containing protein	chr7	748571	752128	-	downstream
3	LOC_Os01g34920	beta-galactosidase precursor, putative, expressed	gene	beta-galactosidase precursor, putative, expressed	chr1	19294524	19301093	-	downstream
3	LOC_Os01g54430	plastocyanin-like domain containing protein, putative, expressed	gene	plastocyanin-like domain containing protein, putative, expressed	chr1	31316996	31318114	-	downstream
3	LOC_Os04g12830	conserved hypothetical protein	gene	conserved hypothetical protein	chr4	7080204	7083383	+	downstream
3	LOC_Os04g56610	expressed protein	gene	expressed protein	chr4	33570460	33570753	+	downstream
3	LOC_Os06g25470	hypothetical protein	gene	hypothetical protein	chr6	14894989	14895649	-	downstream
3	LOC_Os12g36580	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr12	22359743	22363822	+	downstream
3	LOC_Os10g34020	glutathione S-transferase, putative, expressed	gene	glutathione S-transferase, putative, expressed	chr10	18074564	18078367	-	downstream
3	LOC_Os09g38360	hypothetical protein	gene	hypothetical protein	chr9	22089798	22090877	+	downstream
3	LOC_Os07g29410	thioredoxin, putative, expressed	gene	thioredoxin, putative, expressed	chr7	17267672	17269120	+	downstream
3	LOC_Os05g22790	expressed protein	gene	expressed protein	chr5	12869321	12870062	-	downstream
3	LOC_Os02g07628	gamma-thionin family domain containing protein	gene	gamma-thionin family domain containing protein	chr2	3948759	3949208	+	downstream
3	LOC_Os04g56390	expressed protein	gene	expressed protein	chr4	33438011	33438814	+	downstream
3	LOC_Os02g27840	hypothetical protein	gene	hypothetical protein	chr2	16479491	16480909	-	downstream
3	LOC_Os10g42180	aluminum-activated malate transporter, putative, expressed	gene	aluminum-activated malate transporter, putative, expressed	chr10	22610746	22613502	-	downstream
3	LOC_Os07g05950	expressed protein	gene	expressed protein	chr7	2881248	2881919	+	downstream
3	LOC_Os05g41200	OsCML9 - Calmodulin-related calcium sensor protein, expressed	gene	OsCML9 - Calmodulin-related calcium sensor protein, expressed	chr5	24067532	24068539	-	downstream
3	LOC_Os05g30020	hypothetical protein	gene	hypothetical protein	chr5	17317552	17318260	+	downstream
3	LOC_Os08g25280	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr8	15351505	15354580	+	downstream
3	LOC_Os05g04540	expressed protein	gene	expressed protein	chr5	2111227	2112981	+	downstream
3	LOC_Os06g35800	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr6	20889791	20894080	+	downstream
3	LOC_Os04g28810	hypothetical protein	gene	hypothetical protein	chr4	16888705	16889208	+	downstream
3	LOC_Os02g25910	histone H3, putative, expressed	gene	histone H3, putative, expressed	chr2	15198238	15200906	-	downstream
3	LOC_Os07g23970	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr7	13566122	13566868	+	downstream
3	LOC_Os12g37090	hypothetical protein	gene	hypothetical protein	chr12	22688306	22688632	-	downstream
3	LOC_Os01g17420	conserved hypothetical protein	gene	conserved hypothetical protein	chr1	10017728	10019352	-	downstream
3	LOC_Os04g28300	Rf1, mitochondrial precursor, putative, expressed	gene	Rf1, mitochondrial precursor, putative, expressed	chr4	16581600	16585267	+	downstream
3	LOC_Os02g44680	allantoin permease, putative, expressed	gene	allantoin permease, putative, expressed	chr2	27071411	27073151	+	downstream
3	LOC_Os05g03530	tetraspanin family protein, putative, expressed	gene	tetraspanin family protein, putative, expressed	chr5	1493958	1496553	+	downstream
3	LOC_Os03g39960	expressed protein	gene	expressed protein	chr3	22202186	22205720	+	downstream
3	LOC_Os02g10150	bZIP transcription factor, putative	gene	bZIP transcription factor, putative	chr2	5321781	5322421	+	downstream
3	LOC_Os02g39064	osFTL5  FT-Like5 homologous to Flowering Locus T  gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein	gene	osFTL5  FT-Like5 homologous to Flowering Locus T  gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein	chr2	23579425	23581873	-	downstream
3	LOC_Os02g01910	hypothetical protein	gene	hypothetical protein	chr2	495570	496075	+	downstream
3	LOC_Os03g09045	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr3	4693816	4694945	+	downstream
3	LOC_Os02g12000	hypothetical protein	gene	hypothetical protein	chr2	6222957	6223378	-	downstream
3	LOC_Os01g10300	expressed protein	gene	expressed protein	chr1	5416184	5417745	+	downstream
3	LOC_Os11g22370	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr11	12360730	12364957	+	downstream
3	LOC_Os05g45290	hypothetical protein	gene	hypothetical protein	chr5	26222171	26222662	+	downstream
3	LOC_Os12g05980	DUF584 domain containing protein, putative, expressed	gene	DUF584 domain containing protein, putative, expressed	chr12	2750807	2751655	+	downstream
3	LOC_Os11g05390	transporter, major facilitator family, putative, expressed	gene	transporter, major facilitator family, putative, expressed	chr11	2409500	2413437	-	downstream
3	LOC_Os08g03530	MBTB19 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain	gene	MBTB19 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain	chr8	1645340	1646488	+	downstream
3	LOC_Os05g08780	hypothetical protein	gene	hypothetical protein	chr5	4827261	4830690	-	downstream
3	LOC_Os04g38470	expressed protein	gene	expressed protein	chr4	22680743	22681818	+	downstream
3	LOC_Os04g44200	oxygen-evolving enhancer protein 3, chloroplast precursor, putative	gene	oxygen-evolving enhancer protein 3, chloroplast precursor, putative	chr4	25982766	25983412	+	downstream
3	LOC_Os10g08750	hypothetical protein	gene	hypothetical protein	chr10	4760351	4761137	-	downstream
3	LOC_Os06g02470	ATOZI1, putative, expressed	gene	ATOZI1, putative, expressed	chr6	853045	853354	+	downstream
3	LOC_Os01g70290	hypothetical protein	gene	hypothetical protein	chr1	40705932	40707080	+	downstream
3	LOC_Os01g12280	hAT dimerisation domain-containing protein, putative, expressed	gene	hAT dimerisation domain-containing protein, putative, expressed	chr1	6704821	6709653	-	downstream
3	LOC_Os11g14220	tubulin/FtsZ domain containing protein, putative, expressed	gene	tubulin/FtsZ domain containing protein, putative, expressed	chr11	7956251	7959135	+	downstream
3	LOC_Os04g42050	hypothetical protein	gene	hypothetical protein	chr4	24720046	24720547	+	downstream
3	LOC_Os09g23770	expressed protein	gene	expressed protein	chr9	14147019	14148492	-	downstream
3	LOC_Os01g70830	esterase PIR7A, putative, expressed	gene	esterase PIR7A, putative, expressed	chr1	40998785	40999841	-	downstream
3	LOC_Os03g21200	hypothetical protein	gene	hypothetical protein	chr3	12101826	12102131	-	downstream
3	LOC_Os02g27670	hypothetical protein	gene	hypothetical protein	chr2	16389892	16391316	+	downstream
3	LOC_Os03g19380	calvin cycle protein CP12, putative, expressed	gene	calvin cycle protein CP12, putative, expressed	chr3	10909258	10910262	+	downstream
3	LOC_Os11g37680	conserved hypothetical protein	gene	conserved hypothetical protein	chr11	21795322	21800021	-	downstream
3	LOC_Os01g07320	hypothetical protein	gene	hypothetical protein	chr1	3454254	3455059	+	downstream
3	LOC_Os04g35690	tetratricopeptide repeat, putative, expressed	gene	tetratricopeptide repeat, putative, expressed	chr4	21578967	21580409	+	downstream
3	LOC_Os08g38400	oligopeptide transporter, putative, expressed	gene	oligopeptide transporter, putative, expressed	chr8	24308326	24312106	+	downstream
3	LOC_Os04g46079	ELMO/CED-12 family protein, putative, expressed	gene	ELMO/CED-12 family protein, putative, expressed	chr4	27115699	27131876	-	downstream
3	LOC_Os02g44000	amino acid kinase, putative	gene	amino acid kinase, putative	chr2	26566127	26567167	+	downstream
3	LOC_Os03g21230	leucine-rich repeat family protein, putative, expressed	gene	leucine-rich repeat family protein, putative, expressed	chr3	12116529	12121852	+	downstream
3	LOC_Os01g07770	peroxidase precursor, putative	gene	peroxidase precursor, putative	chr1	3731150	3732930	+	downstream
3	LOC_Os03g06470	hypothetical protein	gene	hypothetical protein	chr3	3237468	3237916	-	downstream
3	LOC_Os05g05690	DTA2, putative, expressed	gene	DTA2, putative, expressed	chr5	2830881	2833740	+	downstream
3	LOC_Os01g54420	dynamin family protein, putative, expressed	gene	dynamin family protein, putative, expressed	chr1	31307200	31311870	-	downstream
3	LOC_Os08g43750	carrier, putative, expressed	gene	carrier, putative, expressed	chr8	27639691	27641362	+	downstream
3	LOC_Os05g05940	stress-related protein, putative, expressed	gene	stress-related protein, putative, expressed	chr5	2970734	2972751	-	downstream
3	LOC_Os04g54360	glycosyl transferase 8 domain containing protein, putative, expressed	gene	glycosyl transferase 8 domain containing protein, putative, expressed	chr4	32168377	32170933	+	downstream
3	LOC_Os06g13040	glycosyl hydrolases family 16, putative, expressed	gene	glycosyl hydrolases family 16, putative, expressed	chr6	7143205	7145075	-	downstream
3	LOC_Os05g50960	polygalacturonase, putative, expressed	gene	polygalacturonase, putative, expressed	chr5	29177537	29179823	-	downstream
3	LOC_Os01g19440	pectinesterase, putative	gene	pectinesterase, putative	chr1	10996569	10998270	+	downstream
3	LOC_Os02g30714	dehydrogenase/reductase, putative, expressed	gene	dehydrogenase/reductase, putative, expressed	chr2	18290383	18304266	+	downstream
3	LOC_Os01g05050	mitochondrial glycoprotein, putative	gene	mitochondrial glycoprotein, putative	chr1	2371323	2373066	-	downstream
3	LOC_Os02g21300	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr2	12645456	12648010	+	downstream
3	LOC_Os10g42640	conserved hypothetical protein	gene	conserved hypothetical protein	chr10	22919495	22922619	+	downstream
3	LOC_Os02g26730	hypothetical protein	gene	hypothetical protein	chr2	15698435	15698638	+	downstream
3	LOC_Os04g41870	expressed protein	gene	expressed protein	chr4	24625157	24626002	-	downstream
3	LOC_Os02g30200	PE-PGRS family protein, putative	gene	PE-PGRS family protein, putative	chr2	17946360	17951321	-	downstream
3	LOC_Os12g01210	HCF152, putative, expressed	gene	HCF152, putative, expressed	chr12	124923	127386	+	downstream
3	LOC_Os01g43010	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr1	24490881	24496851	+	downstream
3	LOC_Os01g01730	serine/arginine repetitive matrix protein 2, putative	gene	serine/arginine repetitive matrix protein 2, putative	chr1	389051	389623	+	downstream
3	LOC_Os07g01530	expressed protein	gene	expressed protein	chr7	332160	333829	-	downstream
3	LOC_Os02g53610	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr2	32784480	32787428	-	downstream
3	LOC_Os01g21770	unknown	gene	unknown	chr1	12213002	12213626	+	downstream
3	LOC_Os01g60430	pentatricopeptide repeat-containing protein, putative, expressed	gene	pentatricopeptide repeat-containing protein, putative, expressed	chr1	34945575	34947984	+	downstream
3	LOC_Os07g38050	expressed protein	gene	expressed protein	chr7	22814401	22815224	+	downstream
3	LOC_Os11g38220	DUF538 domain containing protein, putative, expressed	gene	DUF538 domain containing protein, putative, expressed	chr11	22185367	22186031	+	downstream
3	LOC_Os07g18040	hypothetical protein	gene	hypothetical protein	chr7	10677017	10677256	+	downstream
3	LOC_Os02g24210	expressed protein	gene	expressed protein	chr2	14020003	14020670	+	downstream
3	LOC_Os07g07670	expressed protein	gene	expressed protein	chr7	3842575	3843671	+	downstream
3	LOC_Os07g02624	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	946798	949553	-	downstream
3	LOC_Os11g03390	FHA domain containing protein, putative, expressed	gene	FHA domain containing protein, putative, expressed	chr11	1279034	1280763	+	downstream
3	LOC_Os11g20370	hypothetical protein	gene	hypothetical protein	chr11	11778263	11778977	+	downstream
3	LOC_Os03g29740	LSM domain containing protein, expressed	gene	LSM domain containing protein, expressed	chr3	16940020	16942201	+	downstream
3	LOC_Os06g15400	expressed protein	gene	expressed protein	chr6	8750275	8751629	-	downstream
3	LOC_Os02g43740	AGC_PVPK_like_kin82y.6 - ACG kinases include homologs to PKA, PKG and PKC, expressed	gene	AGC_PVPK_like_kin82y.6 - ACG kinases include homologs to PKA, PKG and PKC, expressed	chr2	26387094	26390851	+	downstream
3	LOC_Os02g26930	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr2	15811640	15814771	-	downstream
3	LOC_Os03g01170	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr3	114789	118092	-	downstream
3	LOC_Os07g02660	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	959600	962226	-	downstream
3	LOC_Os06g20420	hypothetical protein	gene	hypothetical protein	chr6	11733894	11734334	+	downstream
3	LOC_Os03g63310	cytochrome P450 71E1, putative, expressed	gene	cytochrome P450 71E1, putative, expressed	chr3	35770778	35774205	+	downstream
3	LOC_Os08g05590	aquaporin protein, putative, expressed	gene	aquaporin protein, putative, expressed	chr8	2988269	2990019	+	downstream
3	LOC_Os06g07810	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr6	3791148	3793775	+	downstream
3	LOC_Os12g36160	hypothetical protein	gene	hypothetical protein	chr12	22127940	22128995	-	downstream
3	LOC_Os05g05340	hypothetical protein	gene	hypothetical protein	chr5	2631528	2632570	-	downstream
3	LOC_Os02g55070	expressed protein	gene	expressed protein	chr2	33723898	33727954	+	downstream
3	LOC_Os04g43640	hypothetical protein	gene	hypothetical protein	chr4	25637541	25640345	+	downstream
3	LOC_Os03g18340	transcription factor like protein, putative	gene	transcription factor like protein, putative	chr3	10275958	10276725	+	downstream
3	LOC_Os10g41480	phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplast precursor, putative, expressed	gene	phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplast precursor, putative, expressed	chr10	22218419	22222040	-	downstream
3	LOC_Os06g41580	LGC1, putative, expressed	gene	LGC1, putative, expressed	chr6	24915347	24915781	+	downstream
3	LOC_Os01g54714	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr1	31479726	31485681	+	downstream
3	LOC_Os03g57490	fasciclin domain containing protein, expressed	gene	fasciclin domain containing protein, expressed	chr3	32771257	32775727	-	downstream
3	LOC_Os04g24510	OsWAK36 - OsWAK receptor-like protein kinase, expressed	gene	OsWAK36 - OsWAK receptor-like protein kinase, expressed	chr4	14047115	14052003	+	downstream
3	LOC_Os08g39730	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr8	25152444	25154174	+	downstream
3	LOC_Os07g35300	TKL_IRAK_DUF26-lc.11 - DUF26 kinases have homology to DUF26 containing loci, expressed	gene	TKL_IRAK_DUF26-lc.11 - DUF26 kinases have homology to DUF26 containing loci, expressed	chr7	21127619	21131537	+	downstream
3	LOC_Os11g09370	histone deacetylase 19, putative, expressed	gene	histone deacetylase 19, putative, expressed	chr11	5023351	5025521	-	downstream
3	LOC_Os08g45070	hypothetical protein	gene	hypothetical protein	chr8	28290848	28291213	+	downstream
3	LOC_Os05g05900	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr5	2962776	2963735	-	downstream
3	LOC_Os11g04490	astaxanthin synthase KC28, putative, expressed	gene	astaxanthin synthase KC28, putative, expressed	chr11	1878361	1880946	+	downstream
3	LOC_Os01g47730	ras-related protein, putative, expressed	gene	ras-related protein, putative, expressed	chr1	27300383	27301981	+	downstream
3	LOC_Os11g01400	hypothetical protein	gene	hypothetical protein	chr11	246082	249718	+	downstream
3	LOC_Os08g31790	hypothetical protein	gene	hypothetical protein	chr8	19708444	19710164	-	downstream
3	LOC_Os11g03610	OsFBX394 - F-box domain containing protein, expressed	gene	OsFBX394 - F-box domain containing protein, expressed	chr11	1401004	1404137	-	downstream
3	LOC_Os04g33450	expressed protein	gene	expressed protein	chr4	20049276	20051128	-	downstream
3	LOC_Os07g30240	mutS family domain IV containing protein	gene	mutS family domain IV containing protein	chr7	17869632	17879170	+	downstream
3	LOC_Os08g34040	hypothetical protein	gene	hypothetical protein	chr8	21319354	21320212	-	downstream
3	LOC_Os05g23660	transposon protein, putative, Pong sub-class	gene	transposon protein, putative, Pong sub-class	chr5	13511583	13515517	+	downstream
3	LOC_Os04g55680	indole-3-acetate beta-glucosyltransferase, putative, expressed	gene	indole-3-acetate beta-glucosyltransferase, putative, expressed	chr4	32960260	32962091	-	downstream
3	LOC_Os05g13410	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr5	7444469	7445885	+	downstream
3	LOC_Os06g27750	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr6	15716182	15717302	-	downstream
3	LOC_Os09g23595	expressed protein	gene	expressed protein	chr9	14018918	14020821	-	downstream
3	LOC_Os03g63700	AIG2-like family domain containing protein, expressed	gene	AIG2-like family domain containing protein, expressed	chr3	35966419	35967520	+	downstream
3	LOC_Os03g09910	aminotransferase, classes I and II, domain containing protein, expressed	gene	aminotransferase, classes I and II, domain containing protein, expressed	chr3	4935474	4940039	+	downstream
3	LOC_Os06g44270	synthase, putative, expressed	gene	synthase, putative, expressed	chr6	26707006	26708892	+	downstream
3	LOC_Os03g52380	PIII5 - Proteinase inhibitor II family protein precursor, expressed	gene	PIII5 - Proteinase inhibitor II family protein precursor, expressed	chr3	30069394	30070084	+	downstream
3	LOC_Os07g33290	hypothetical protein	gene	hypothetical protein	chr7	19902956	19903969	+	downstream
3	LOC_Os12g42390	hypothetical protein	gene	hypothetical protein	chr12	26311474	26311860	+	downstream
3	LOC_Os09g26520	hypothetical protein	gene	hypothetical protein	chr9	16022741	16027615	+	downstream
3	LOC_Os09g27220	ATBRXL3/BRX-LIKE3, putative, expressed	gene	ATBRXL3/BRX-LIKE3, putative, expressed	chr9	16551512	16553781	+	downstream
3	LOC_Os12g42540	zinc finger, C3HC4 type domain containing protein	gene	zinc finger, C3HC4 type domain containing protein	chr12	26391264	26391518	+	downstream
3	LOC_Os01g67910	hypothetical protein	gene	hypothetical protein	chr1	39464221	39465305	-	downstream
3	LOC_Os02g19130	transcription factor X1, putative, expressed	gene	transcription factor X1, putative, expressed	chr2	11151747	11156505	+	downstream
3	LOC_Os07g44600	peroxidase, putative	gene	peroxidase, putative	chr7	26616241	26617072	-	downstream
3	LOC_Os04g50850	aspartyl protease family, putative, expressed	gene	aspartyl protease family, putative, expressed	chr4	29890289	29891897	+	downstream
3	LOC_Os02g34850	histone-lysine N-methyltransferase ASHH2, putative, expressed	gene	histone-lysine N-methyltransferase ASHH2, putative, expressed	chr2	20893940	20901307	+	downstream
3	LOC_Os05g39640	hypothetical protein	gene	hypothetical protein	chr5	23209635	23210113	+	downstream
3	LOC_Os09g36990	expressed protein	gene	expressed protein	chr9	21336077	21338022	+	downstream
3	LOC_Os01g03740	nuclease PA3, putative, expressed	gene	nuclease PA3, putative, expressed	chr1	1561612	1565554	-	downstream
3	LOC_Os06g02490	acyl CoA binding protein, putative, expressed	gene	acyl CoA binding protein, putative, expressed	chr6	859906	861570	-	downstream
3	LOC_Os05g08940	transposon protein, putative, Mariner sub-class	gene	transposon protein, putative, Mariner sub-class	chr5	4942570	4946511	+	downstream
3	LOC_Os04g51600	hypothetical protein	gene	hypothetical protein	chr4	30384891	30386591	+	downstream
3	LOC_Os08g44850	C2 domain containing protein, putative, expressed	gene	C2 domain containing protein, putative, expressed	chr8	28167644	28169616	-	downstream
3	LOC_Os01g63400	PPR repeat containing protein, expressed	gene	PPR repeat containing protein, expressed	chr1	36731793	36736360	+	downstream
3	LOC_Os02g10800	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr2	5736604	5738853	+	downstream
3	LOC_Os08g37432	MATE efflux family protein, putative, expressed	gene	MATE efflux family protein, putative, expressed	chr8	23709915	23714806	+	downstream
3	LOC_Os02g36730	expressed protein	gene	expressed protein	chr2	22155458	22155790	+	downstream
3	LOC_Os02g46990	AAA-type ATPase family protein, putative, expressed	gene	AAA-type ATPase family protein, putative, expressed	chr2	28683631	28688289	+	downstream
3	LOC_Os08g33360	transposon protein, putative, Mariner sub-class	gene	transposon protein, putative, Mariner sub-class	chr8	20805973	20808440	+	downstream
3	LOC_Os01g02830	receptor-like kinase ARK1AS, putative, expressed	gene	receptor-like kinase ARK1AS, putative, expressed	chr1	993710	996262	-	downstream
3	LOC_Os01g34770	tetratricopeptide repeat containing protein, putative, expressed	gene	tetratricopeptide repeat containing protein, putative, expressed	chr1	19172863	19175270	+	downstream
3	LOC_Os04g45590	glyoxalase family protein, putative, expressed	gene	glyoxalase family protein, putative, expressed	chr4	26790471	26791514	+	downstream
3	LOC_Os01g05220	hypothetical protein	gene	hypothetical protein	chr1	2451591	2452586	+	downstream
3	LOC_Os07g40470	expressed protein	gene	expressed protein	chr7	24249062	24250471	+	downstream
3	LOC_Os08g27080	hypothetical protein	gene	hypothetical protein	chr8	16542130	16542381	+	downstream
3	LOC_Os02g54190	pectinesterase, putative, expressed	gene	pectinesterase, putative, expressed	chr2	33215399	33217726	-	downstream
3	LOC_Os02g49590	ASC1, putative, expressed	gene	ASC1, putative, expressed	chr2	30304668	30307552	+	downstream
3	LOC_Os05g23410	hypothetical protein	gene	hypothetical protein	chr5	13315667	13316976	+	downstream
3	LOC_Os11g45040	hypothetical protein	gene	hypothetical protein	chr11	26786910	26788787	-	downstream
3	LOC_Os07g05360	photosystem II 10 kDa polypeptide, chloroplast precursor, putative, expressed	gene	photosystem II 10 kDa polypeptide, chloroplast precursor, putative, expressed	chr7	2452961	2455612	+	downstream
3	LOC_Os10g40559	exostosin family domain containing protein, expressed	gene	exostosin family domain containing protein, expressed	chr10	21650231	21651818	+	downstream
3	LOC_Os04g50780	expressed protein	gene	expressed protein	chr4	29859683	29860104	+	downstream
3	LOC_Os04g42860	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr4	25183235	25186977	+	downstream
3	LOC_Os02g10710	hsp20/alpha crystallin family protein, putative, expressed	gene	hsp20/alpha crystallin family protein, putative, expressed	chr2	5639315	5640360	-	downstream
3	LOC_Os10g32020	expressed protein	gene	expressed protein	chr10	16749923	16753809	+	downstream
3	LOC_Os05g46130	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr5	26690214	26697534	+	downstream
3	LOC_Os08g23420	conserved hypothetical protein	gene	conserved hypothetical protein	chr8	14162008	14163577	+	downstream
3	LOC_Os02g55489	unknown	gene	unknown	chr2	33973889	33974186	-	downstream
3	LOC_Os05g49920	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr5	28570417	28573160	+	downstream
3	LOC_Os09g27730	HVA22, putative, expressed	gene	HVA22, putative, expressed	chr9	16874520	16875342	+	downstream
3	LOC_Os01g63800	pleckstrin homology domain-containing protein, putative, expressed	gene	pleckstrin homology domain-containing protein, putative, expressed	chr1	37015985	37017005	+	downstream
3	LOC_Os07g12150	acyl carrier protein, putative, expressed	gene	acyl carrier protein, putative, expressed	chr7	6797981	6798908	+	downstream
3	LOC_Os06g36910	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr6	21749359	21751422	+	downstream
3	LOC_Os02g06205	phytosulfokine receptor precursor, putative, expressed	gene	phytosulfokine receptor precursor, putative, expressed	chr2	3102629	3105505	-	downstream
3	LOC_Os05g49790	DUF538 domain containing protein, putative, expressed	gene	DUF538 domain containing protein, putative, expressed	chr5	28515402	28515853	-	downstream
3	LOC_Os09g29740	beta-expansin precursor, putative	gene	beta-expansin precursor, putative	chr9	18083521	18083901	+	downstream
3	LOC_Os02g55250	BHLH transcription factor, putative	gene	BHLH transcription factor, putative	chr2	33828040	33832179	+	downstream
3	LOC_Os11g05310	hypothetical protein	gene	hypothetical protein	chr11	2346936	2347866	+	downstream
3	LOC_Os05g11130	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr5	6267845	6273013	+	downstream
3	LOC_Os09g17580	expressed protein	gene	expressed protein	chr9	10750517	10751325	+	downstream
3	LOC_Os01g21310	expressed protein	gene	expressed protein	chr1	11904386	11905652	+	downstream
3	LOC_Os07g41780	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr7	25027916	25034071	-	downstream
3	LOC_Os07g23270	transposon protein, putative, CACTA, En/Spm sub-class	gene	transposon protein, putative, CACTA, En/Spm sub-class	chr7	13114326	13119067	-	downstream
3	LOC_Os05g02300	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	gene	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	chr5	738204	739079	+	downstream
3	LOC_Os07g36465	vacuolar ATP synthase subunit H, putative, expressed	gene	vacuolar ATP synthase subunit H, putative, expressed	chr7	21815575	21817950	+	downstream
3	LOC_Os07g13520	expressed protein	gene	expressed protein	chr7	7738120	7741166	-	downstream
3	LOC_Os01g33670	hypothetical protein	gene	hypothetical protein	chr1	18529378	18529946	+	downstream
3	LOC_Os02g54330	OsFBDUF14 - F-box and DUF domain containing protein	gene	OsFBDUF14 - F-box and DUF domain containing protein	chr2	33306895	33308136	-	downstream
3	LOC_Os10g01090	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr10	84278	85246	-	downstream
3	LOC_Os05g08910	expressed protein	gene	expressed protein	chr5	4934545	4935207	-	downstream
3	LOC_Os12g04720	expressed protein	gene	expressed protein	chr12	2009203	2010802	-	downstream
3	LOC_Os10g07532	unknown	gene	unknown	chr10	4022926	4023821	-	downstream
3	LOC_Os05g02810	protein binding protein, putative, expressed	gene	protein binding protein, putative, expressed	chr5	1010630	1012876	+	downstream
3	LOC_Os08g27690	hypothetical protein	gene	hypothetical protein	chr8	16869666	16869920	+	downstream
3	LOC_Os01g68480	thioredoxin, putative, expressed	gene	thioredoxin, putative, expressed	chr1	39793183	39794768	+	downstream
3	LOC_Os12g04100	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr12	1715156	1717030	+	downstream
3	LOC_Os02g56340	expressed protein	gene	expressed protein	chr2	34482508	34483496	+	downstream
3	LOC_Os02g44240	hypothetical protein	gene	hypothetical protein	chr2	26766757	26767769	-	downstream
3	LOC_Os03g02400	plastocyanin-like domain containing protein, putative, expressed	gene	plastocyanin-like domain containing protein, putative, expressed	chr3	849763	851121	+	downstream
3	LOC_Os07g45310	BSD domain-containing protein, putative, expressed	gene	BSD domain-containing protein, putative, expressed	chr7	27036001	27037676	+	downstream
3	LOC_Os11g25080	hypothetical protein	gene	hypothetical protein	chr11	13836165	13836572	-	downstream
3	LOC_Os01g31800	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	gene	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	chr1	17419386	17420245	+	downstream
3	LOC_Os06g44140	transmembrane 9 superfamily member, putative, expressed	gene	transmembrane 9 superfamily member, putative, expressed	chr6	26630941	26633881	+	downstream
3	LOC_Os01g59050	cytochrome P450, putative	gene	cytochrome P450, putative	chr1	34130785	34132337	+	downstream
3	LOC_Os12g37370	DNA-directed RNA polymerase II subunit RPB9, putative, expressed	gene	DNA-directed RNA polymerase II subunit RPB9, putative, expressed	chr12	22913089	22914562	+	downstream
3	LOC_Os08g02204	expressed protein	gene	expressed protein	chr8	748996	749899	+	downstream
3	LOC_Os07g43970	calmodulin-binding protein, putative, expressed	gene	calmodulin-binding protein, putative, expressed	chr7	26286980	26290084	+	downstream
3	LOC_Os02g21860	hypothetical protein	gene	hypothetical protein	chr2	13000352	13000720	+	downstream
3	LOC_Os09g34075	conserved hypothetical protein	gene	conserved hypothetical protein	chr9	20115168	20115497	+	downstream
3	LOC_Os01g09360	hypothetical protein	gene	hypothetical protein	chr1	4758946	4759712	-	downstream
3	LOC_Os05g42000	peroxidase precursor, putative, expressed	gene	peroxidase precursor, putative, expressed	chr5	24524565	24526959	+	downstream
3	LOC_Os03g21110	emp24/gp25L/p24 family protein, putative, expressed	gene	emp24/gp25L/p24 family protein, putative, expressed	chr3	12017886	12020202	+	downstream
3	LOC_Os10g37600	expressed protein	gene	expressed protein	chr10	20043440	20045302	+	downstream
3	LOC_Os01g74320	ubiquitin ligase, putative, expressed	gene	ubiquitin ligase, putative, expressed	chr1	43062696	43064440	+	downstream
3	LOC_Os07g36850	transposon protein, putative, Pong sub-class	gene	transposon protein, putative, Pong sub-class	chr7	22074848	22075770	+	downstream
3	LOC_Os09g27350	RIO1 family protein	gene	RIO1 family protein	chr9	16623949	16627431	+	downstream
3	LOC_Os10g27110	expressed protein	gene	expressed protein	chr10	14217761	14219897	-	downstream
3	LOC_Os04g03440	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr4	1473359	1477146	+	downstream
3	LOC_Os03g41820	hypothetical protein	gene	hypothetical protein	chr3	23220014	23220415	-	downstream
3	LOC_Os05g02180	expressed protein	gene	expressed protein	chr5	685419	686671	+	downstream
3	LOC_Os02g43420	hypothetical protein	gene	hypothetical protein	chr2	26201282	26201518	+	downstream
3	LOC_Os04g47500	transposon protein, putative, Pong sub-class	gene	transposon protein, putative, Pong sub-class	chr4	27993594	27994955	-	downstream
3	LOC_Os04g14750	hypothetical protein	gene	hypothetical protein	chr4	8272653	8274019	-	downstream
3	LOC_Os08g02354	expressed protein	gene	expressed protein	chr8	923215	933627	-	downstream
3	LOC_Os02g57440	LYK8, putative, expressed	gene	LYK8, putative, expressed	chr2	35199142	35200416	+	downstream
3	LOC_Os10g29310	MBTB51 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed	gene	MBTB51 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed	chr10	15173773	15175243	+	downstream
3	LOC_Os03g49450	conserved hypothetical protein	gene	conserved hypothetical protein	chr3	28140960	28142292	+	downstream
3	LOC_Os09g22480	hypothetical protein	gene	hypothetical protein	chr9	13566936	13567319	+	downstream
3	LOC_Os01g04620	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr1	2070830	2072621	+	downstream
3	LOC_Os09g20850	expressed protein	gene	expressed protein	chr9	12554489	12555826	+	downstream
3	LOC_Os02g02790	C2 domain containing protein, expressed	gene	C2 domain containing protein, expressed	chr2	1061877	1066213	+	downstream
3	LOC_Os05g47470	VIP1 protein, putative, expressed	gene	VIP1 protein, putative, expressed	chr5	27135707	27136937	+	downstream
3	LOC_Os09g36790	expressed protein	gene	expressed protein	chr9	21223913	21225180	+	downstream
3	LOC_Os07g38250	expressed protein	gene	expressed protein	chr7	22934629	22936620	+	downstream
3	LOC_Os05g51700	nucleoside diphosphate kinase, putative, expressed	gene	nucleoside diphosphate kinase, putative, expressed	chr5	29597809	29600886	-	downstream
3	LOC_Os07g38540	40S ribosomal protein S13, putative, expressed	gene	40S ribosomal protein S13, putative, expressed	chr7	23152191	23153100	+	downstream
3	LOC_Os12g05120	receptor kinase, putative, expressed	gene	receptor kinase, putative, expressed	chr12	2250183	2253077	-	downstream
3	LOC_Os12g16620	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr12	9508600	9511546	+	downstream
3	LOC_Os06g46910	ZOS6-07 - C2H2 zinc finger protein, expressed	gene	ZOS6-07 - C2H2 zinc finger protein, expressed	chr6	28466986	28470157	+	downstream
3	LOC_Os05g41900	translation initiation factor SUI1, putative, expressed	gene	translation initiation factor SUI1, putative, expressed	chr5	24475206	24477363	+	downstream
3	LOC_Os03g24030	glutaredoxin, putative, expressed	gene	glutaredoxin, putative, expressed	chr3	13630058	13631104	+	downstream
3	LOC_Os02g35110	tubulin binding cofactor C, putative, expressed	gene	tubulin binding cofactor C, putative, expressed	chr2	21068084	21069364	+	downstream
3	LOC_Os05g40710	DELLA protein GAI, putative	gene	DELLA protein GAI, putative	chr5	23808937	23810418	+	downstream
3	LOC_Os02g26890	PPR repeat containing protein	gene	PPR repeat containing protein	chr2	15782604	15784124	+	downstream
3	LOC_Os12g10920	hypothetical protein	gene	hypothetical protein	chr12	5902615	5903008	+	downstream
3	LOC_Os03g61550	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr3	34897734	34898959	+	downstream
3	LOC_Os09g24260	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr9	14403530	14412662	+	downstream
3	LOC_Os03g46560	RPD1, putative	gene	RPD1, putative	chr3	26336546	26339402	+	downstream
3	LOC_Os05g02780	glycine-rich protein A3, putative, expressed	gene	glycine-rich protein A3, putative, expressed	chr5	1000219	1002819	-	downstream
3	LOC_Os01g58194	protein disulfide isomerase, putative, expressed	gene	protein disulfide isomerase, putative, expressed	chr1	33640910	33649951	+	downstream
3	LOC_Os10g30410	cytochrome P450 71D7, putative, expressed	gene	cytochrome P450 71D7, putative, expressed	chr10	15735424	15739788	-	downstream
3	LOC_Os09g30414	aspartic proteinase nepenthesin-2 precursor, putative, expressed	gene	aspartic proteinase nepenthesin-2 precursor, putative, expressed	chr9	18520579	18523732	+	downstream
3	LOC_Os03g07530	OsFBK12 - F-box domain and kelch repeat containing protein, expressed	gene	OsFBK12 - F-box domain and kelch repeat containing protein, expressed	chr3	3832950	3835744	+	downstream
3	LOC_Os09g28220	NFKB, putative, expressed	gene	NFKB, putative, expressed	chr9	17140365	17142324	+	downstream
3	LOC_Os02g18630	OsFBX44 - F-box domain containing protein, expressed	gene	OsFBX44 - F-box domain containing protein, expressed	chr2	10857550	10859010	-	downstream
3	LOC_Os03g46180	LTPL71 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	gene	LTPL71 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	chr3	26112985	26114326	+	downstream
3	LOC_Os01g48410	ATROPGEF7/ROPGEF7, putative, expressed	gene	ATROPGEF7/ROPGEF7, putative, expressed	chr1	27741182	27744192	+	downstream
3	LOC_Os01g64180	expressed protein	gene	expressed protein	chr1	37274712	37276357	-	downstream
3	LOC_Os04g35660	no apical meristem protein, putative, expressed	gene	no apical meristem protein, putative, expressed	chr4	21561673	21562759	+	downstream
3	LOC_Os04g44400	OsClp7 - Putative Clp protease homologue, expressed	gene	OsClp7 - Putative Clp protease homologue, expressed	chr4	26099530	26100753	+	downstream
3	LOC_Os03g30780	expressed protein	gene	expressed protein	chr3	17547733	17549230	+	downstream
3	LOC_Os04g06800	hypothetical protein	gene	hypothetical protein	chr4	3577686	3578806	-	downstream
3	LOC_Os04g47220	aquaporin protein, putative, expressed	gene	aquaporin protein, putative, expressed	chr4	27861402	27863408	+	downstream
3	LOC_Os06g40500	expressed protein	gene	expressed protein	chr6	24138352	24141393	+	downstream
3	LOC_Os01g67080	hypothetical protein	gene	hypothetical protein	chr1	38941994	38944595	-	downstream
3	LOC_Os08g40555	ATPase, E1-E2 type, putative, expressed	gene	ATPase, E1-E2 type, putative, expressed	chr8	25671714	25673234	-	downstream
3	LOC_Os04g53480	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr4	31658054	31661806	-	downstream
3	LOC_Os07g02000	expressed protein	gene	expressed protein	chr7	606681	607705	+	downstream
3	LOC_Os04g24160	hypothetical protein	gene	hypothetical protein	chr4	13806500	13807727	-	downstream
3	LOC_Os05g35420	hypothetical protein	gene	hypothetical protein	chr5	20985391	20985741	+	downstream
3	LOC_Os08g37130	oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed	gene	oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed	chr8	23461220	23465679	+	downstream
3	LOC_Os03g57149	mTERF domain containing protein, expressed	gene	mTERF domain containing protein, expressed	chr3	32583067	32584322	-	downstream
3	LOC_Os05g30890	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr5	17874114	17881351	+	downstream
3	LOC_Os06g37580	hypothetical protein	gene	hypothetical protein	chr6	22255656	22256036	-	downstream
3	LOC_Os01g02700	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr1	919992	922630	-	downstream
3	LOC_Os11g01260	expressed protein	gene	expressed protein	chr11	140220	141665	+	downstream
3	LOC_Os07g29470	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr7	17304277	17305504	+	downstream
3	LOC_Os06g03550	hypothetical protein	gene	hypothetical protein	chr6	1369307	1369864	+	downstream
3	LOC_Os05g15130	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr5	8581451	8583631	-	downstream
3	LOC_Os03g61530	invertase/pectin methylesterase inhibitor family protein, putative, expressed	gene	invertase/pectin methylesterase inhibitor family protein, putative, expressed	chr3	34888214	34888995	-	downstream
3	LOC_Os01g19510	conserved hypothetical protein	gene	conserved hypothetical protein	chr1	11074687	11075125	-	downstream
3	LOC_Os05g31760	annexin, putative, expressed	gene	annexin, putative, expressed	chr5	18440164	18442607	+	downstream
3	LOC_Os12g39960	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr12	24661943	24662535	+	downstream
3	LOC_Os07g30760	UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed	gene	UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed	chr7	18202452	18204167	+	downstream
3	LOC_Os03g03890	protein kinase family protein, putative, expressed	gene	protein kinase family protein, putative, expressed	chr3	1771815	1774678	+	downstream
3	LOC_Os06g30250	expressed protein	gene	expressed protein	chr6	17453254	17454482	+	downstream
3	LOC_Os11g12010	expressed protein	gene	expressed protein	chr11	6681418	6683393	-	downstream
3	LOC_Os07g39540	hypothetical protein	gene	hypothetical protein	chr7	23689523	23691081	+	downstream
3	LOC_Os04g06330	retrotransposon, putative, centromere-specific	gene	retrotransposon, putative, centromere-specific	chr4	3304788	3305267	-	downstream
3	LOC_Os03g46220	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr3	26126244	26132021	+	downstream
3	LOC_Os04g45700	COBRA, putative, expressed	gene	COBRA, putative, expressed	chr4	26847688	26849692	+	downstream
3	LOC_Os04g38930	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr4	22946528	22948357	+	downstream
3	LOC_Os11g38190	hypothetical protein	gene	hypothetical protein	chr11	22176437	22177853	-	downstream
3	LOC_Os12g05620	hypothetical protein	gene	hypothetical protein	chr12	2582896	2585408	-	downstream
3	LOC_Os01g07364	expressed protein	gene	expressed protein	chr1	3477537	3477980	-	downstream
3	LOC_Os05g33380	fructose-bisphospate aldolase isozyme, putative, expressed	gene	fructose-bisphospate aldolase isozyme, putative, expressed	chr5	19544212	19546400	+	downstream
3	LOC_Os03g08980	expressed protein	gene	expressed protein	chr3	4664183	4665946	-	downstream
3	LOC_Os04g46860	scarecrow, putative, expressed	gene	scarecrow, putative, expressed	chr4	27579528	27582190	+	downstream
3	LOC_Os05g31220	cell division control protein 48 homolog B, putative	gene	cell division control protein 48 homolog B, putative	chr5	18097733	18100510	+	downstream
3	LOC_Os10g34730	GEM, putative, expressed	gene	GEM, putative, expressed	chr10	18473600	18474798	-	downstream
3	LOC_Os02g26840	O-acyltransferase, putative	gene	O-acyltransferase, putative	chr2	15753641	15754681	+	downstream
3	LOC_Os12g41910	BTBN25 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed	gene	BTBN25 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed	chr12	25943949	25949410	-	downstream
3	LOC_Os04g53710	plastocyanin-like domain containing protein, putative, expressed	gene	plastocyanin-like domain containing protein, putative, expressed	chr4	31823342	31824158	+	downstream
3	LOC_Os12g30550	protein of unknown function domain containing protein, expressed	gene	protein of unknown function domain containing protein, expressed	chr12	18323024	18325115	-	downstream
3	LOC_Os09g34120	expressed protein	gene	expressed protein	chr9	20145098	20146086	+	downstream
3	LOC_Os06g40020	DEAD-box ATP-dependent RNA helicase 52A, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase 52A, putative, expressed	chr6	23805010	23810153	+	downstream
3	LOC_Os11g47900	SCARECROW, putative, expressed	gene	SCARECROW, putative, expressed	chr11	28368023	28370307	+	downstream
3	LOC_Os08g06870	hypothetical protein	gene	hypothetical protein	chr8	3837014	3837855	-	downstream
3	LOC_Os10g13870	expressed protein	gene	expressed protein	chr10	7553515	7554888	-	downstream
3	LOC_Os12g29480	SAM domain containing protein, putative, expressed	gene	SAM domain containing protein, putative, expressed	chr12	17508804	17509714	+	downstream
3	LOC_Os11g24600	hypothetical protein	gene	hypothetical protein	chr11	13574670	13575320	-	downstream
3	LOC_Os03g55260	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr3	31446430	31448547	+	downstream
3	LOC_Os01g50300	hypothetical protein	gene	hypothetical protein	chr1	28877104	28877622	-	downstream
3	LOC_Os01g51360	lipase, putative, expressed	gene	lipase, putative, expressed	chr1	29528681	29531802	-	downstream
3	LOC_Os06g03900	esterase precursor, putative, expressed	gene	esterase precursor, putative, expressed	chr6	1571423	1573149	+	downstream
3	LOC_Os06g43030	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr6	25866750	25869247	+	downstream
3	LOC_Os02g04630	sodium/calcium exchanger protein, putative, expressed	gene	sodium/calcium exchanger protein, putative, expressed	chr2	2070492	2075369	+	downstream
3	LOC_Os09g38390	octicosapeptide/Phox/Bem1p, putative, expressed	gene	octicosapeptide/Phox/Bem1p, putative, expressed	chr9	22097982	22100696	+	downstream
3	LOC_Os03g11230	expressed protein	gene	expressed protein	chr3	5776776	5778388	+	downstream
3	LOC_Os10g26950	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr10	14116299	14119936	-	downstream
3	LOC_Os09g36520	ki1 protein, putative, expressed	gene	ki1 protein, putative, expressed	chr9	21060635	21062316	-	downstream
3	LOC_Os02g44960	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr2	27228929	27229624	-	downstream
3	LOC_Os05g38510	hypothetical protein	gene	hypothetical protein	chr5	22530686	22533612	+	downstream
3	LOC_Os03g20450	expressed protein	gene	expressed protein	chr3	11584018	11589084	+	downstream
3	LOC_Os01g56850	expressed protein	gene	expressed protein	chr1	32834797	32837208	+	downstream
3	LOC_Os04g43760	phenylalanine ammonia-lyase, putative, expressed	gene	phenylalanine ammonia-lyase, putative, expressed	chr4	25721724	25724949	-	downstream
3	LOC_Os04g42260	protein phosphatase 2C, putative, expressed	gene	protein phosphatase 2C, putative, expressed	chr4	24816353	24821482	+	downstream
3	LOC_Os07g16150	expressed protein	gene	expressed protein	chr7	9404833	9406226	+	downstream
3	LOC_Os02g18770	hypothetical protein	gene	hypothetical protein	chr2	10939563	10941269	+	downstream
3	LOC_Os02g41880	hypothetical protein	gene	hypothetical protein	chr2	25169546	25169797	+	downstream
3	LOC_Os04g21590	PB1 domain containing protein, expressed	gene	PB1 domain containing protein, expressed	chr4	12202592	12204051	+	downstream
3	LOC_Os01g06440	expressed protein	gene	expressed protein	chr1	3036689	3038157	+	downstream
3	LOC_Os03g09130	hypothetical protein	gene	hypothetical protein	chr3	4759613	4762103	+	downstream
3	LOC_Os04g54320	expressed protein	gene	expressed protein	chr4	32153306	32154425	+	downstream
3	LOC_Os01g23710	no apical meristem protein, putative, expressed	gene	no apical meristem protein, putative, expressed	chr1	13341853	13344880	-	downstream
3	LOC_Os03g01740	expressed protein	gene	expressed protein	chr3	469266	470094	+	downstream
3	LOC_Os04g14140	conserved hypothetical protein	gene	conserved hypothetical protein	chr4	7902504	7903644	-	downstream
3	LOC_Os05g34290	glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed	gene	glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed	chr5	20239550	20242183	+	downstream
3	LOC_Os12g18700	expressed protein	gene	expressed protein	chr12	10804528	10806388	-	downstream
3	LOC_Os08g41080	expressed protein	gene	expressed protein	chr8	25966688	25968807	+	downstream
3	LOC_Os10g34300	OsFBX387 - F-box domain containing protein	gene	OsFBX387 - F-box domain containing protein	chr10	18223237	18225755	-	downstream
3	LOC_Os10g40070	expressed protein	gene	expressed protein	chr10	21388500	21389132	+	downstream
3	LOC_Os01g73500	expressed protein	gene	expressed protein	chr1	42586192	42589294	-	downstream
3	LOC_Os08g34130	mitochondrial glycoprotein, putative, expressed	gene	mitochondrial glycoprotein, putative, expressed	chr8	21394986	21396811	+	downstream
3	LOC_Os08g34620	hypothetical protein	gene	hypothetical protein	chr8	21752767	21753689	+	downstream
3	LOC_Os03g14710	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr3	7997097	7999272	+	downstream
3	LOC_Os03g43010	expressed protein	gene	expressed protein	chr3	23987314	23995710	+	downstream
3	LOC_Os05g50320	hypothetical protein	gene	hypothetical protein	chr5	28774759	28775002	-	downstream
3	LOC_Os06g43960	expressed protein	gene	expressed protein	chr6	26481248	26482813	-	downstream
3	LOC_Os06g08100	jp18, putative	gene	jp18, putative	chr6	3931093	3931803	+	downstream
3	LOC_Os06g18010	UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed	gene	UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed	chr6	10478282	10479903	+	downstream
3	LOC_Os07g08930	expressed protein	gene	expressed protein	chr7	4641510	4643930	+	downstream
3	LOC_Os11g36820	hypothetical protein	gene	hypothetical protein	chr11	21263834	21264460	+	downstream
3	LOC_Os06g15550	ubiquitin carboxyl-terminal hydrolase, family 1, putative	gene	ubiquitin carboxyl-terminal hydrolase, family 1, putative	chr6	8820963	8822144	+	downstream
3	LOC_Os10g02340	peptide transporter PTR2, putative, expressed	gene	peptide transporter PTR2, putative, expressed	chr10	835729	837970	+	downstream
3	LOC_Os11g32400	hypothetical protein	gene	hypothetical protein	chr11	18666654	18666962	-	downstream
3	LOC_Os03g45710	2Fe-2S iron-sulfur cluster binding domain containing protein, expressed	gene	2Fe-2S iron-sulfur cluster binding domain containing protein, expressed	chr3	25798433	25799349	+	downstream
3	LOC_Os09g20630	ASC1, putative, expressed	gene	ASC1, putative, expressed	chr9	12427220	12429868	+	downstream
3	LOC_Os03g11840	expressed protein	gene	expressed protein	chr3	6202130	6203006	+	downstream
3	LOC_Os10g34340	OsFBX388 - F-box domain containing protein	gene	OsFBX388 - F-box domain containing protein	chr10	18237613	18239981	+	downstream
3	LOC_Os03g26784	hypothetical protein	gene	hypothetical protein	chr3	15290008	15292902	-	downstream
3	LOC_Os09g29360	helix-loop-helix DNA-binding protein, putative, expressed	gene	helix-loop-helix DNA-binding protein, putative, expressed	chr9	17825478	17827459	+	downstream
3	LOC_Os04g51260	conserved hypothetical protein	gene	conserved hypothetical protein	chr4	30186676	30189183	+	downstream
3	LOC_Os12g13295	expressed protein	gene	expressed protein	chr12	7406729	7409292	+	downstream
3	LOC_Os07g38140	expressed protein	gene	expressed protein	chr7	22877502	22878316	-	downstream
3	LOC_Os03g55810	uncharacterized PE-PGRS family protein PE_PGRS46, putative, expressed	gene	uncharacterized PE-PGRS family protein PE_PGRS46, putative, expressed	chr3	31768837	31769400	-	downstream
3	LOC_Os10g05790	POEI4 - Pollen Ole e I allergen and extensin family protein precursor, expressed	gene	POEI4 - Pollen Ole e I allergen and extensin family protein precursor, expressed	chr10	2920743	2922655	-	downstream
3	LOC_Os07g39860	expressed protein	gene	expressed protein	chr7	23901880	23902551	-	downstream
3	LOC_Os07g34598	tyrosyl-DNA phosphodiesterase 1, putative, expressed	gene	tyrosyl-DNA phosphodiesterase 1, putative, expressed	chr7	20738513	20748468	-	downstream
3	LOC_Os05g47442	expressed protein	gene	expressed protein	chr5	27115250	27115971	-	downstream
3	LOC_Os11g40760	expressed protein	gene	expressed protein	chr11	23916799	23917910	+	downstream
3	LOC_Os12g41170	SEY1, putative, expressed	gene	SEY1, putative, expressed	chr12	25475012	25483349	+	downstream
3	LOC_Os05g37340	expressed protein	gene	expressed protein	chr5	21777035	21780212	+	downstream
3	LOC_Os08g39880	G-patch domain containing protein, expressed	gene	G-patch domain containing protein, expressed	chr8	25267344	25270914	+	downstream
3	LOC_Os12g19250	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr12	11159459	11162452	+	downstream
3	LOC_Os01g61140	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr1	35393192	35394591	+	downstream
3	LOC_Os09g30210	expressed protein	gene	expressed protein	chr9	18386471	18390684	+	downstream
3	LOC_Os01g57920	OsFBL3 - F-box domain and LRR containing protein, expressed	gene	OsFBL3 - F-box domain and LRR containing protein, expressed	chr1	33483563	33486780	-	downstream
3	LOC_Os09g13930	LTPL4 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	gene	LTPL4 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	chr9	8197943	8198755	+	downstream
3	LOC_Os02g58620	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr2	35817127	35823762	+	downstream
3	LOC_Os03g59690	DUF617 domain containing protein	gene	DUF617 domain containing protein	chr3	33987195	33988145	-	downstream
3	LOC_Os02g58470	expressed protein	gene	expressed protein	chr2	35745528	35747760	-	downstream
3	LOC_Os11g17930	expressed protein	gene	expressed protein	chr11	10062861	10064321	+	downstream
3	LOC_Os02g10580	NB-ARC domain containing disease resistance protein, putative, expressed	gene	NB-ARC domain containing disease resistance protein, putative, expressed	chr2	5565956	5567620	+	downstream
3	LOC_Os02g39710	CCT/B-box zinc finger protein, putative, expressed	gene	CCT/B-box zinc finger protein, putative, expressed	chr2	23983881	23985424	+	downstream
3	LOC_Os02g30450	harpin-induced protein 1 domain containing protein	gene	harpin-induced protein 1 domain containing protein	chr2	18131447	18132199	-	downstream
3	LOC_Os03g39900	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr3	22177762	22182539	+	downstream
3	LOC_Os07g29380	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	17251174	17253293	-	downstream
3	LOC_Os09g01670	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative	gene	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative	chr9	475979	483575	+	downstream
3	LOC_Os03g62820	hypothetical protein	gene	hypothetical protein	chr3	35531884	35533016	+	downstream
3	LOC_Os11g39254	hypothetical protein	gene	hypothetical protein	chr11	22909012	22910165	+	downstream
3	LOC_Os01g68220	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr1	39646440	39652613	+	downstream
3	LOC_Os06g49410	hypothetical protein	gene	hypothetical protein	chr6	29937346	29937934	+	downstream
3	LOC_Os04g39230	expressed protein	gene	expressed protein	chr4	23144719	23145901	+	downstream
3	LOC_Os01g53790	stress-induced protein, putative, expressed	gene	stress-induced protein, putative, expressed	chr1	30917060	30920297	+	downstream
3	LOC_Os03g45340	hsp20/alpha crystallin family protein, putative, expressed	gene	hsp20/alpha crystallin family protein, putative, expressed	chr3	25597571	25598880	-	downstream
3	LOC_Os08g41240	MrBTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH-related domain	gene	MrBTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH-related domain	chr8	26041553	26042602	-	downstream
3	LOC_Os12g05580	expressed protein	gene	expressed protein	chr12	2561784	2562388	+	downstream
3	LOC_Os12g42170	conserved hypothetical protein	gene	conserved hypothetical protein	chr12	26104714	26105331	-	downstream
3	LOC_Os08g07950	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr8	4486730	4494601	+	downstream
3	LOC_Os02g58189	unknown	gene	unknown	chr2	35610995	35611354	-	downstream
3	LOC_Os03g05450	expressed protein	gene	expressed protein	chr3	2694578	2695497	-	downstream
3	LOC_Os02g03910	OsFBX35 - F-box domain containing protein	gene	OsFBX35 - F-box domain containing protein	chr2	1664217	1665802	+	downstream
3	LOC_Os03g58030	acetyltransferase, GNAT family, putative	gene	acetyltransferase, GNAT family, putative	chr3	33030343	33030852	+	downstream
3	LOC_Os01g61020	curculin-like lectin family protein, putative	gene	curculin-like lectin family protein, putative	chr1	35308561	35311722	-	downstream
3	LOC_Os06g44870	expressed protein	gene	expressed protein	chr6	27122573	27123655	-	downstream
3	LOC_Os02g25449	expressed protein	gene	expressed protein	chr2	14859305	14860591	+	downstream
3	LOC_Os01g57890	Homeobox domain containing protein, expressed	gene	Homeobox domain containing protein, expressed	chr1	33470856	33477491	+	downstream
3	LOC_Os01g68670	cysteine proteinase inhibitor precursor, putative	gene	cysteine proteinase inhibitor precursor, putative	chr1	39877916	39878362	+	downstream
3	LOC_Os01g38510	protein transport protein Sec61 subunit beta, putative	gene	protein transport protein Sec61 subunit beta, putative	chr1	21631362	21631604	+	downstream
3	LOC_Os05g32700	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr5	19086139	19090594	+	downstream
3	LOC_Os03g42430	B3 DNA binding domain containing protein, expressed	gene	B3 DNA binding domain containing protein, expressed	chr3	23612129	23614549	+	downstream
3	LOC_Os03g58020	acetyltransferase, GNAT family, putative, expressed	gene	acetyltransferase, GNAT family, putative, expressed	chr3	33029185	33030004	+	downstream
3	LOC_Os09g37260	conserved hypothetical protein	gene	conserved hypothetical protein	chr9	21523888	21525085	-	downstream
3	LOC_Os02g06450	coiled-coil domain-containing protein 72, putative	gene	coiled-coil domain-containing protein 72, putative	chr2	3219169	3219516	+	downstream
3	LOC_Os05g42130	MONOCULM 1, putative, expressed	gene	MONOCULM 1, putative, expressed	chr5	24568592	24570135	+	downstream
3	LOC_Os06g04620	GDP-mannose 4,6 dehydratase 2, putative, expressed	gene	GDP-mannose 4,6 dehydratase 2, putative, expressed	chr6	2016779	2018459	+	downstream
3	LOC_Os12g25790	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr12	14956616	14957188	+	downstream
3	LOC_Os05g04215	expressed protein	gene	expressed protein	chr5	1910023	1911346	+	downstream
3	LOC_Os09g35700	LTPL45 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	gene	LTPL45 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	chr9	20533684	20534473	+	downstream
3	LOC_Os04g48130	OsRhmbd11 - Putative Rhomboid homologue, expressed	gene	OsRhmbd11 - Putative Rhomboid homologue, expressed	chr4	28458201	28460025	+	downstream
3	LOC_Os02g33140	ribosomal protein, putative, expressed	gene	ribosomal protein, putative, expressed	chr2	19704432	19707600	-	downstream
3	LOC_Os08g01120	sulfate transporter, putative, expressed	gene	sulfate transporter, putative, expressed	chr8	85335	87510	+	downstream
3	LOC_Os03g61750	expressed protein	gene	expressed protein	chr3	34997408	35000594	+	downstream
3	LOC_Os12g43110	OsSAUR58 - Auxin-responsive SAUR gene family member, expressed	gene	OsSAUR58 - Auxin-responsive SAUR gene family member, expressed	chr12	26734618	26735291	+	downstream
3	LOC_Os01g60690	hypothetical protein	gene	hypothetical protein	chr1	35093403	35093909	+	downstream
3	LOC_Os06g47280	hypothetical protein	gene	hypothetical protein	chr6	28653840	28655981	+	downstream
3	LOC_Os07g40230	hypothetical protein	gene	hypothetical protein	chr7	24121027	24121509	-	downstream
3	LOC_Os01g65790	pectinesterase, putative, expressed	gene	pectinesterase, putative, expressed	chr1	38205829	38210756	-	downstream
3	LOC_Os08g28670	pathogenesis-related Bet v I family protein, putative, expressed	gene	pathogenesis-related Bet v I family protein, putative, expressed	chr8	17507370	17508977	-	downstream
3	LOC_Os11g04090	conserved hypothetical protein	gene	conserved hypothetical protein	chr11	1654934	1655377	+	downstream
3	LOC_Os02g03750	polygalacturonase, putative, expressed	gene	polygalacturonase, putative, expressed	chr2	1570082	1574900	-	downstream
3	LOC_Os06g06330	expressed protein	gene	expressed protein	chr6	2944570	2945379	+	downstream
3	LOC_Os04g30380	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr4	17954812	17959720	-	downstream
3	LOC_Os06g46284	glycosyl hydrolase, family 31, putative, expressed	gene	glycosyl hydrolase, family 31, putative, expressed	chr6	28044149	28057084	-	downstream
3	LOC_Os07g01290	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr7	177548	180537	+	downstream
3	LOC_Os11g09460	hypothetical protein	gene	hypothetical protein	chr11	5069743	5070622	-	downstream
3	LOC_Os06g49860	methyltransferase, putative, expressed	gene	methyltransferase, putative, expressed	chr6	30182276	30185941	+	downstream
3	LOC_Os01g03010	hypothetical protein	gene	hypothetical protein	chr1	1142557	1143497	-	downstream
3	LOC_Os01g21810	hypothetical protein	gene	hypothetical protein	chr1	12231509	12233741	+	downstream
3	LOC_Os06g04900	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr6	2153709	2155717	-	downstream
3	LOC_Os03g43470	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr3	24248895	24250478	-	downstream
3	LOC_Os03g62420	expressed protein	gene	expressed protein	chr3	35348562	35351833	-	downstream
3	LOC_Os06g40410	transposon protein, putative, CACTA, En/Spm sub-class	gene	transposon protein, putative, CACTA, En/Spm sub-class	chr6	24060015	24066602	-	downstream
3	LOC_Os01g43160	polygalacturonase, putative, expressed	gene	polygalacturonase, putative, expressed	chr1	24628226	24631288	+	downstream
3	LOC_Os06g43920	hypothetical protein	gene	hypothetical protein	chr6	26454049	26454964	+	downstream
3	LOC_Os01g55640	seven in absentia protein family protein, putative	gene	seven in absentia protein family protein, putative	chr1	32056111	32057089	+	downstream
3	LOC_Os01g05480	expressed protein	gene	expressed protein	chr1	2583986	2588023	-	downstream
3	LOC_Os03g15420	dynamin family protein, putative, expressed	gene	dynamin family protein, putative, expressed	chr3	8433727	8436144	+	downstream
3	LOC_Os01g60010	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr1	34688826	34690474	+	downstream
3	LOC_Os02g01090	ZOS2-01 - C2H2 zinc finger protein	gene	ZOS2-01 - C2H2 zinc finger protein	chr2	48497	48880	-	downstream
3	LOC_Os02g45080	MYB family transcription factor, putative	gene	MYB family transcription factor, putative	chr2	27341534	27344352	+	downstream
3	LOC_Os01g42210	LTPL47 - Protease inhibitor/seed storage/LTP family protein precursor, putative	gene	LTPL47 - Protease inhibitor/seed storage/LTP family protein precursor, putative	chr1	23918314	23920085	+	downstream
3	LOC_Os02g58350	OsRR3  type-A response regulator, expressed	gene	OsRR3  type-A response regulator, expressed	chr2	35683378	35684521	-	downstream
3	LOC_Os01g23910	hypothetical protein	gene	hypothetical protein	chr1	13453882	13454861	-	downstream
3	LOC_Os02g53880	hypothetical protein	gene	hypothetical protein	chr2	32987710	32987913	+	downstream
3	LOC_Os11g14290	hypothetical protein	gene	hypothetical protein	chr11	8013074	8013475	+	downstream
3	LOC_Os04g23689	hypothetical protein	gene	hypothetical protein	chr4	13541326	13541684	-	downstream
3	LOC_Os02g38970	expressed protein	gene	expressed protein	chr2	23538936	23543278	+	downstream
3	LOC_Os05g49630	expressed protein	gene	expressed protein	chr5	28410923	28414492	-	downstream
3	LOC_Os07g08750	STE_PAK_Ste20_Slob_Wnk.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	gene	STE_PAK_Ste20_Slob_Wnk.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	chr7	4497925	4500919	-	downstream
3	LOC_Os12g02670	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr12	928791	933529	+	downstream
3	LOC_Os05g09580	hypothetical protein	gene	hypothetical protein	chr5	5414915	5415184	+	downstream
3	LOC_Os03g56600	hypothetical protein	gene	hypothetical protein	chr3	32235417	32236049	+	downstream
3	LOC_Os06g06520	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr6	3056017	3058018	-	downstream
3	LOC_Os02g26640	hypothetical protein	gene	hypothetical protein	chr2	15632827	15633604	-	downstream
3	LOC_Os05g34030	peptide transporter PTR2, putative, expressed	gene	peptide transporter PTR2, putative, expressed	chr5	20036625	20038643	+	downstream
3	LOC_Os04g23610	expressed protein	gene	expressed protein	chr4	13510491	13511644	+	downstream
3	LOC_Os07g01190	hypothetical protein	gene	hypothetical protein	chr7	112407	113323	-	downstream
3	LOC_Os06g44360	hypothetical protein	gene	hypothetical protein	chr6	26776503	26777393	+	downstream
3	LOC_Os01g56250	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr1	32392346	32394954	+	downstream
3	LOC_Os04g54310	conserved hypothetical protein	gene	conserved hypothetical protein	chr4	32151236	32152761	-	downstream
3	LOC_Os08g25000	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr8	15159539	15160159	-	downstream
3	LOC_Os03g07370	HNH endonuclease domain-containing protein, putative, expressed	gene	HNH endonuclease domain-containing protein, putative, expressed	chr3	3743423	3745082	-	downstream
3	LOC_Os08g34990	late embryogenesis abundant protein, putative	gene	late embryogenesis abundant protein, putative	chr8	22034652	22034969	+	downstream
3	LOC_Os03g03910	catalase domain containing protein, expressed	gene	catalase domain containing protein, expressed	chr3	1786644	1789953	-	downstream
3	LOC_Os11g01210	HCF152, putative	gene	HCF152, putative	chr11	126373	128004	+	downstream
3	LOC_Os11g40490	MBTB63 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain	gene	MBTB63 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain	chr11	23695890	23698806	+	downstream
3	LOC_Os06g19430	expressed protein	gene	expressed protein	chr6	11067826	11068782	-	downstream
3	LOC_Os01g40040	hypothetical protein	gene	hypothetical protein	chr1	22586458	22588931	-	downstream
3	LOC_Os01g33410	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr1	18389177	18393085	+	downstream
3	LOC_Os06g22540	hypothetical protein	gene	hypothetical protein	chr6	13096663	13097134	-	downstream
3	LOC_Os12g16520	wall-associated receptor kinase 3 precursor, putative, expressed	gene	wall-associated receptor kinase 3 precursor, putative, expressed	chr12	9461342	9464036	-	downstream
3	LOC_Os05g41660	ICE-like protease p20 domain containing protein, putative, expressed	gene	ICE-like protease p20 domain containing protein, putative, expressed	chr5	24320601	24322049	-	downstream
3	LOC_Os06g49700	expressed protein	gene	expressed protein	chr6	30068650	30072758	+	downstream
3	LOC_Os08g32600	STE_MEKK_ste11_MAP3K.21 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	gene	STE_MEKK_ste11_MAP3K.21 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	chr8	20184262	20189675	-	downstream
3	LOC_Os03g01560	hypothetical protein	gene	hypothetical protein	chr3	354861	355211	+	downstream
3	LOC_Os07g19400	pentatricopeptide domain containing protein, putative, expressed	gene	pentatricopeptide domain containing protein, putative, expressed	chr7	11478603	11480904	+	downstream
3	LOC_Os11g01540	conserved hypothetical protein	gene	conserved hypothetical protein	chr11	307804	310033	+	downstream
3	LOC_Os04g38250	hypothetical protein	gene	hypothetical protein	chr4	22574334	22575234	-	downstream
3	LOC_Os08g05810	DEAD-box ATP-dependent RNA helicase, putative	gene	DEAD-box ATP-dependent RNA helicase, putative	chr8	3112975	3116299	-	downstream
3	LOC_Os10g35510	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr10	18926282	18926605	-	downstream
3	LOC_Os01g68020	BTBZ2 - Bric-a-Brac, Tramtrack, and Broad Complex BTB domain with TAZ zinc finger and Calmodulin-binding domains, expressed	gene	BTBZ2 - Bric-a-Brac, Tramtrack, and Broad Complex BTB domain with TAZ zinc finger and Calmodulin-binding domains, expressed	chr1	39543181	39547581	+	downstream
3	LOC_Os01g62430	C2 domain containing protein, putative, expressed	gene	C2 domain containing protein, putative, expressed	chr1	36134768	36136252	+	downstream
3	LOC_Os04g44090	expressed protein	gene	expressed protein	chr4	25923037	25926227	+	downstream
3	LOC_Os05g42140	methyltransferase domain containing protein, expressed	gene	methyltransferase domain containing protein, expressed	chr5	24570441	24571360	+	downstream
3	LOC_Os05g28460	MEE12, putative, expressed	gene	MEE12, putative, expressed	chr5	16602311	16603984	+	downstream
3	LOC_Os11g01990	expressed protein	gene	expressed protein	chr11	530016	531080	-	downstream
3	LOC_Os03g18870	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr3	10570555	10572185	-	downstream
3	LOC_Os06g38920	transposon protein, putative, CACTA, En/Spm sub-class	gene	transposon protein, putative, CACTA, En/Spm sub-class	chr6	23087900	23091073	+	downstream
3	LOC_Os05g11970	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr5	6838735	6842692	+	downstream
3	LOC_Os07g03840	lectin-like receptor kinase, putative, expressed	gene	lectin-like receptor kinase, putative, expressed	chr7	1602024	1604378	-	downstream
3	LOC_Os09g32370	gp176, putative, expressed	gene	gp176, putative, expressed	chr9	19332536	19334811	+	downstream
3	LOC_Os01g07270	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr1	3429549	3429923	+	downstream
3	LOC_Os07g34720	harpin-induced protein 1 domain containing protein, expressed	gene	harpin-induced protein 1 domain containing protein, expressed	chr7	20805661	20806553	+	downstream
3	LOC_Os05g33920	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr5	19965574	19966830	+	downstream
3	LOC_Os09g34080	hypothetical protein	gene	hypothetical protein	chr9	20115557	20116111	-	downstream
3	LOC_Os03g22170	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr3	12712047	12713302	+	downstream
3	LOC_Os01g73930	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr1	42830297	42835777	-	downstream
3	LOC_Os07g15020	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	8608219	8610175	+	downstream
3	LOC_Os03g62840	hypothetical protein	gene	hypothetical protein	chr3	35540550	35541113	+	downstream
3	LOC_Os12g06550	expressed protein	gene	expressed protein	chr12	3174209	3177445	+	downstream
3	LOC_Os03g41280	expressed protein	gene	expressed protein	chr3	22946030	22949069	+	downstream
3	LOC_Os11g47700	zinc finger, C3HC4 type domain containing protein	gene	zinc finger, C3HC4 type domain containing protein	chr11	28262054	28262566	+	downstream
3	LOC_Os03g10580	retrotransposon protein, putative, SINE subclass	gene	retrotransposon protein, putative, SINE subclass	chr3	5389892	5392048	+	downstream
3	LOC_Os06g44190	hypothetical protein	gene	hypothetical protein	chr6	26659030	26659360	+	downstream
3	LOC_Os06g36210	amino acid transporter, putative, expressed	gene	amino acid transporter, putative, expressed	chr6	21207195	21213384	+	downstream
3	LOC_Os11g25120	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr11	13846115	13847715	-	downstream
3	LOC_Os05g45060	RING-H2 finger protein ATL2M, putative, expressed	gene	RING-H2 finger protein ATL2M, putative, expressed	chr5	26124000	26124906	+	downstream
3	LOC_Os10g27330	glycerol-3-phosphate acyltransferase, putative, expressed	gene	glycerol-3-phosphate acyltransferase, putative, expressed	chr10	14352988	14356963	+	downstream
3	LOC_Os11g39609	OsFBDUF64 - F-box and DUF domain containing protein	gene	OsFBDUF64 - F-box and DUF domain containing protein	chr11	23130792	23132129	-	downstream
3	LOC_Os06g14310	potassium channel AKT1, putative	gene	potassium channel AKT1, putative	chr6	7981085	7982860	+	downstream
3	LOC_Os04g43820	expressed protein	gene	expressed protein	chr4	25758256	25758958	-	downstream
3	LOC_Os07g40434	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr7	24232716	24238197	-	downstream
3	LOC_Os01g16860	AGO4-2, putative, expressed	gene	AGO4-2, putative, expressed	chr1	9625918	9629035	-	downstream
3	LOC_Os08g25030	plant protein of unknown function domain containing protein	gene	plant protein of unknown function domain containing protein	chr8	15194145	15195635	+	downstream
3	LOC_Os03g40000	expressed protein	gene	expressed protein	chr3	22215657	22216659	-	downstream
3	LOC_Os11g07270	expressed protein	gene	expressed protein	chr11	3659826	3663672	+	downstream
3	LOC_Os12g42284	conserved hypothetical protein	gene	conserved hypothetical protein	chr12	26260271	26261077	-	downstream
3	LOC_Os07g08650	expressed protein	gene	expressed protein	chr7	4456612	4458226	+	downstream
3	LOC_Os10g42520	hypothetical protein	gene	hypothetical protein	chr10	22863381	22864509	+	downstream
3	LOC_Os11g26880	RALFL14 - Rapid ALkalinization Factor RALF family protein precursor, expressed	gene	RALFL14 - Rapid ALkalinization Factor RALF family protein precursor, expressed	chr11	14981203	14982260	-	downstream
3	LOC_Os01g55940	OsGH3.2 - Probable indole-3-acetic acid-amido synthetase, expressed	gene	OsGH3.2 - Probable indole-3-acetic acid-amido synthetase, expressed	chr1	32220332	32224079	+	downstream
3	LOC_Os09g31434	expressed protein	gene	expressed protein	chr9	18916298	18917041	-	downstream
3	LOC_Os09g21270	hypothetical protein	gene	hypothetical protein	chr9	12832198	12833402	+	downstream
3	LOC_Os11g16550	uncharacterized protein ycf53, putative, expressed	gene	uncharacterized protein ycf53, putative, expressed	chr11	9171585	9173157	+	downstream
3	LOC_Os12g37415	expressed protein	gene	expressed protein	chr12	22934375	22934812	+	downstream
3	LOC_Os12g19080	hypothetical protein	gene	hypothetical protein	chr12	11076761	11077419	-	downstream
3	LOC_Os01g56470	mal d 1-associated protein, putative, expressed	gene	mal d 1-associated protein, putative, expressed	chr1	32542260	32544165	+	downstream
3	LOC_Os12g01420	ammonium transporter protein, putative	gene	ammonium transporter protein, putative	chr12	264610	265986	-	downstream
3	LOC_Os07g27340	No apical meristem protein, putative	gene	No apical meristem protein, putative	chr7	15905893	15907806	+	downstream
3	LOC_Os06g19160	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr6	10899609	10908498	-	downstream
3	LOC_Os12g39330	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr12	24169201	24170641	+	downstream
3	LOC_Os06g11060	expressed protein	gene	expressed protein	chr6	5799189	5799858	+	downstream
3	LOC_Os01g47330	ribosomal protein L7/L12 C-terminal domain containing protein, expressed	gene	ribosomal protein L7/L12 C-terminal domain containing protein, expressed	chr1	27040747	27041625	+	downstream
3	LOC_Os03g03860	expressed protein	gene	expressed protein	chr3	1736294	1741630	-	downstream
3	LOC_Os03g21450	bromodomain domain containing protein, expressed	gene	bromodomain domain containing protein, expressed	chr3	12259513	12262117	+	downstream
3	LOC_Os06g15750	NB-ARC domain containing protein	gene	NB-ARC domain containing protein	chr6	8934093	8938019	-	downstream
3	LOC_Os03g36534	expressed protein	gene	expressed protein	chr3	20243123	20243693	+	downstream
3	LOC_Os07g44760	hypothetical protein	gene	hypothetical protein	chr7	26714501	26716191	-	downstream
3	LOC_Os08g44460	expressed protein	gene	expressed protein	chr8	27963482	27965242	+	downstream
3	LOC_Os01g70390	expressed protein	gene	expressed protein	chr1	40779301	40783842	+	downstream
3	LOC_Os03g49480	elongation of fatty acids protein 2, putative, expressed	gene	elongation of fatty acids protein 2, putative, expressed	chr3	28153101	28154464	-	downstream
3	LOC_Os09g36410	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr9	21007532	21010930	+	downstream
3	LOC_Os12g29950	nodulin, putative, expressed	gene	nodulin, putative, expressed	chr12	17872364	17877342	+	downstream
3	LOC_Os12g13930	3-oxoacyl-reductase, chloroplast precursor, putative, expressed	gene	3-oxoacyl-reductase, chloroplast precursor, putative, expressed	chr12	7913014	7916494	+	downstream
3	LOC_Os07g06490	DNA binding protein, putative, expressed	gene	DNA binding protein, putative, expressed	chr7	3148944	3151649	-	downstream
3	LOC_Os02g57280	CBS domain containing membrane protein, putative, expressed	gene	CBS domain containing membrane protein, putative, expressed	chr2	35086471	35088446	+	downstream
3	LOC_Os02g57110	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr2	34961728	34963397	-	downstream
3	LOC_Os01g13250	sarcoma antigen NY-SAR-91, putative, expressed	gene	sarcoma antigen NY-SAR-91, putative, expressed	chr1	7384895	7387164	+	downstream
3	LOC_Os06g36930	HSF-type DNA-binding domain containing protein	gene	HSF-type DNA-binding domain containing protein	chr6	21760307	21761424	+	downstream
3	LOC_Os01g52200	mitochondrial ATP synthase g subunit family protein, putative	gene	mitochondrial ATP synthase g subunit family protein, putative	chr1	30016736	30018934	-	downstream
3	LOC_Os08g33110	hypothetical protein	gene	hypothetical protein	chr8	20575428	20575964	+	downstream
3	LOC_Os01g40560	hypersensitive-induced response protein, putative, expressed	gene	hypersensitive-induced response protein, putative, expressed	chr1	22905399	22906767	+	downstream
3	LOC_Os07g47570	expressed protein	gene	expressed protein	chr7	28444987	28447457	+	downstream
3	LOC_Os01g62610	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	chr1	36252504	36255934	+	downstream
3	LOC_Os12g39090	expressed protein	gene	expressed protein	chr12	24011648	24013572	+	downstream
3	LOC_Os01g56220	expressed protein	gene	expressed protein	chr1	32378716	32379545	-	downstream
3	LOC_Os05g48360	membrane attack complex component/perforin/complement C9, putative, expressed	gene	membrane attack complex component/perforin/complement C9, putative, expressed	chr5	27660759	27664836	-	downstream
3	LOC_Os12g03330	hypothetical protein	gene	hypothetical protein	chr12	1290584	1290910	+	downstream
3	LOC_Os11g06110	carrier, putative, expressed	gene	carrier, putative, expressed	chr11	2903822	2905274	+	downstream
3	LOC_Os03g15100	conserved hypothetical protein	gene	conserved hypothetical protein	chr3	8247492	8248340	+	downstream
3	LOC_Os08g17100	conserved hypothetical protein	gene	conserved hypothetical protein	chr8	10463742	10465285	+	downstream
3	LOC_Os05g49460	CTP synthase, putative	gene	CTP synthase, putative	chr5	28289214	28294162	-	downstream
3	LOC_Os02g22580	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	13467193	13467580	-	downstream
3	LOC_Os03g07100	LTPL82 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	gene	LTPL82 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	chr3	3625388	3627631	+	downstream
3	LOC_Os01g72190	expressed protein	gene	expressed protein	chr1	41860519	41862652	+	downstream
3	LOC_Os07g31830	GTPase activating protein, putative, expressed	gene	GTPase activating protein, putative, expressed	chr7	18910794	18913898	+	downstream
3	LOC_Os05g05520	transposon protein, putative, Mutator sub-class	gene	transposon protein, putative, Mutator sub-class	chr5	2742651	2748387	+	downstream
3	LOC_Os03g01190	dehydrogenase, putative, expressed	gene	dehydrogenase, putative, expressed	chr3	121870	124144	-	downstream
3	LOC_Os04g58820	ATOFP18/OFP18, putative, expressed	gene	ATOFP18/OFP18, putative, expressed	chr4	34803723	34805015	+	downstream
3	LOC_Os04g46920	zinc knuckle domain containing protein, expressed	gene	zinc knuckle domain containing protein, expressed	chr4	27635529	27638098	-	downstream
3	LOC_Os03g35560	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr3	19706928	19712245	+	downstream
3	LOC_Os07g49070	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	29375269	29379980	+	downstream
3	LOC_Os01g02410	protein kinase domain containing protein	gene	protein kinase domain containing protein	chr1	773727	778237	-	downstream
3	LOC_Os07g07340	glucan endo-1,3-beta-glucosidase precursor, putative, expressed	gene	glucan endo-1,3-beta-glucosidase precursor, putative, expressed	chr7	3667837	3671257	+	downstream
3	LOC_Os02g12220	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr2	6366274	6369534	-	downstream
3	LOC_Os03g61090	expressed protein	gene	expressed protein	chr3	34699888	34700836	+	downstream
3	LOC_Os10g32910	hypothetical protein	gene	hypothetical protein	chr10	17155320	17155790	+	downstream
3	LOC_Os01g49650	LTPL150 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	gene	LTPL150 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	chr1	28537729	28538659	-	downstream
3	LOC_Os07g39680	UV-induced protein uvi15, putative, expressed	gene	UV-induced protein uvi15, putative, expressed	chr7	23781112	23782902	+	downstream
3	LOC_Os03g58750	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr3	33452327	33453806	+	downstream
3	LOC_Os02g48184	expressed protein	gene	expressed protein	chr2	29495283	29496586	-	downstream
3	LOC_Os08g25890	tetratricopeptide repeat, putative	gene	tetratricopeptide repeat, putative	chr8	15763469	15764251	-	downstream
3	LOC_Os02g25860	glutelin, putative, expressed	gene	glutelin, putative, expressed	chr2	15145494	15147449	+	downstream
3	LOC_Os01g48840	hypothetical protein	gene	hypothetical protein	chr1	28026485	28027382	-	downstream
3	LOC_Os12g12760	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr12	7024427	7027089	+	downstream
3	LOC_Os06g47544	expressed protein	gene	expressed protein	chr6	28786766	28787346	+	downstream
3	LOC_Os07g07870	LTPL77 - Protease inhibitor/seed storage/LTP family protein precursor, putative	gene	LTPL77 - Protease inhibitor/seed storage/LTP family protein precursor, putative	chr7	3949801	3950582	+	downstream
3	LOC_Os06g33970	VQ domain containing protein, putative, expressed	gene	VQ domain containing protein, putative, expressed	chr6	19779914	19780818	+	downstream
3	LOC_Os06g11360	hypothetical protein	gene	hypothetical protein	chr6	5974646	5975460	+	downstream
3	LOC_Os01g64330	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr1	37348349	37351043	-	downstream
3	LOC_Os01g07340	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr1	3464634	3466520	-	downstream
3	LOC_Os08g38310	expressed protein	gene	expressed protein	chr8	24260450	24267162	+	downstream
3	LOC_Os03g02530	OsRhmbd7 - Putative Rhomboid homologue, expressed	gene	OsRhmbd7 - Putative Rhomboid homologue, expressed	chr3	931236	933774	+	downstream
3	LOC_Os01g01780	exostosin family protein, putative, expressed	gene	exostosin family protein, putative, expressed	chr1	411579	414830	+	downstream
3	LOC_Os05g32350	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr5	18800121	18804768	+	downstream
3	LOC_Os01g42790	xylem cysteine proteinase 2 precursor, putative, expressed	gene	xylem cysteine proteinase 2 precursor, putative, expressed	chr1	24350258	24352301	-	downstream
3	LOC_Os03g48310	plasma membrane ATPase, putative, expressed	gene	plasma membrane ATPase, putative, expressed	chr3	27503217	27510374	+	downstream
3	LOC_Os09g16780	hypothetical protein	gene	hypothetical protein	chr9	10259561	10261220	-	downstream
3	LOC_Os02g01275	expressed protein	gene	expressed protein	chr2	152788	153882	+	downstream
3	LOC_Os12g28015	expressed protein	gene	expressed protein	chr12	16517004	16517624	+	downstream
3	LOC_Os08g01990	conserved hypothetical protein	gene	conserved hypothetical protein	chr8	634390	634941	-	downstream
3	LOC_Os03g57670	DUF260 domain containing protein, putative	gene	DUF260 domain containing protein, putative	chr3	32860507	32861873	+	downstream
3	LOC_Os04g28200	Rf1, mitochondrial precursor, putative, expressed	gene	Rf1, mitochondrial precursor, putative, expressed	chr4	16489838	16492533	+	downstream
3	LOC_Os11g20270	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr11	11704467	11706629	+	downstream
3	LOC_Os01g10440	xylosyltransferase, putative, expressed	gene	xylosyltransferase, putative, expressed	chr1	5506002	5508548	+	downstream
3	LOC_Os07g01090	transmembrane amino acid transporter protein, putative, expressed	gene	transmembrane amino acid transporter protein, putative, expressed	chr7	47787	52212	-	downstream
3	LOC_Os02g01326	auxin-induced protein 5NG4, putative, expressed	gene	auxin-induced protein 5NG4, putative, expressed	chr2	175810	179370	-	downstream
3	LOC_Os02g48480	expressed protein	gene	expressed protein	chr2	29671952	29672764	+	downstream
3	LOC_Os01g22954	serine carboxypeptidase, putative, expressed	gene	serine carboxypeptidase, putative, expressed	chr1	12895148	12914354	+	downstream
3	LOC_Os05g10625	expressed protein	gene	expressed protein	chr5	5790155	5791417	+	downstream
3	LOC_Os01g17150	plastid-specific 50S ribosomal protein 5, chloroplast precursor, putative, expressed	gene	plastid-specific 50S ribosomal protein 5, chloroplast precursor, putative, expressed	chr1	9858326	9859740	+	downstream
3	LOC_Os01g67040	OsRhmbd5 - Putative Rhomboid homologue, expressed	gene	OsRhmbd5 - Putative Rhomboid homologue, expressed	chr1	38927559	38929227	+	downstream
3	LOC_Os08g29090	hypothetical protein	gene	hypothetical protein	chr8	17809451	17810625	+	downstream
3	LOC_Os01g58510	NB-ARC domain containing protein	gene	NB-ARC domain containing protein	chr1	33814361	33815554	+	downstream
3	LOC_Os07g30960	monooxygenase, putative, expressed	gene	monooxygenase, putative, expressed	chr7	18330762	18332965	-	downstream
3	LOC_Os04g39940	brevis radix, putative	gene	brevis radix, putative	chr4	23597226	23599678	+	downstream
3	LOC_Os07g05600	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr7	2627354	2632087	+	downstream
3	LOC_Os02g58290	expressed protein	gene	expressed protein	chr2	35667046	35667417	+	downstream
3	LOC_Os01g03050	fruit protein PKIWI502, putative, expressed	gene	fruit protein PKIWI502, putative, expressed	chr1	1164737	1167415	+	downstream
3	LOC_Os10g36020	hypothetical protein	gene	hypothetical protein	chr10	19183668	19183937	+	downstream
3	LOC_Os09g31080	induced stolen tip protein TUB8, putative, expressed	gene	induced stolen tip protein TUB8, putative, expressed	chr9	18684678	18685939	+	downstream
3	LOC_Os06g07580	expressed protein	gene	expressed protein	chr6	3655475	3656131	+	downstream
3	LOC_Os10g03890	hypothetical protein	gene	hypothetical protein	chr10	1767392	1767969	+	downstream
3	LOC_Os04g02100	hypothetical protein	gene	hypothetical protein	chr4	678549	679987	+	downstream
3	LOC_Os02g05610	ZOS2-03 - C2H2 zinc finger protein, expressed	gene	ZOS2-03 - C2H2 zinc finger protein, expressed	chr2	2728846	2734452	+	downstream
3	LOC_Os04g31520	RALFL21 - Rapid ALkalinization Factor RALF family protein precursor, expressed	gene	RALFL21 - Rapid ALkalinization Factor RALF family protein precursor, expressed	chr4	18674307	18675020	+	downstream
3	LOC_Os04g50100	RING-H2 finger protein ATL5G, putative, expressed	gene	RING-H2 finger protein ATL5G, putative, expressed	chr4	29698075	29700009	-	downstream
3	LOC_Os11g44790	EAP30/Vps36 family domain containing protein	gene	EAP30/Vps36 family domain containing protein	chr11	26634033	26636936	+	downstream
3	LOC_Os03g18390	hypothetical protein	gene	hypothetical protein	chr3	10311185	10312338	+	downstream
3	LOC_Os02g06360	uncharacterized protein CPn_0526/CP_0226/CPj0526/CpB0547, putative, expressed	gene	uncharacterized protein CPn_0526/CP_0226/CPj0526/CpB0547, putative, expressed	chr2	3179475	3182789	+	downstream
3	LOC_Os08g15000	pentatricopeptide repeat domain containing protein, putative	gene	pentatricopeptide repeat domain containing protein, putative	chr8	9049296	9050578	+	downstream
3	LOC_Os01g45900	OsFBX20 - F-box domain containing protein, expressed	gene	OsFBX20 - F-box domain containing protein, expressed	chr1	26073986	26076090	+	downstream
3	LOC_Os10g02270	expressed protein	gene	expressed protein	chr10	811961	812749	+	downstream
3	LOC_Os01g46940	sphingolipid C4-hydroxylase SUR2, putative, expressed	gene	sphingolipid C4-hydroxylase SUR2, putative, expressed	chr1	26789232	26790625	+	downstream
3	LOC_Os05g04600	ABC transmembrane transporter domain containing protein, expressed	gene	ABC transmembrane transporter domain containing protein, expressed	chr5	2165020	2166868	+	downstream
3	LOC_Os03g18260	hypothetical protein	gene	hypothetical protein	chr3	10232415	10233326	-	downstream
3	LOC_Os02g21080	AGAP008475-PA, putative, expressed	gene	AGAP008475-PA, putative, expressed	chr2	12494311	12495284	+	downstream
3	LOC_Os03g60670	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr3	34481802	34485245	+	downstream
3	LOC_Os01g47800	AAA-type ATPase family protein, putative, expressed	gene	AAA-type ATPase family protein, putative, expressed	chr1	27356293	27362817	+	downstream
3	LOC_Os03g16870	expressed protein	gene	expressed protein	chr3	9372089	9374734	-	downstream
3	LOC_Os05g42100	expressed protein	gene	expressed protein	chr5	24560733	24562041	-	downstream
3	LOC_Os06g14050	membrane attack complex component/perforin/complement C9, putative, expressed	gene	membrane attack complex component/perforin/complement C9, putative, expressed	chr6	7834234	7840308	+	downstream
3	LOC_Os05g37110	conserved hypothetical protein	gene	conserved hypothetical protein	chr5	21629021	21629428	+	downstream
3	LOC_Os02g35140	auxin response factor 7, putative, expressed	gene	auxin response factor 7, putative, expressed	chr2	21092282	21098357	+	downstream
3	LOC_Os02g03920	hypothetical protein	gene	hypothetical protein	chr2	1666678	1667007	+	downstream
3	LOC_Os04g38890	expressed protein	gene	expressed protein	chr4	22927990	22928381	+	downstream
3	LOC_Os06g17490	expressed protein	gene	expressed protein	chr6	10145842	10148403	+	downstream
3	LOC_Os02g23900	hypothetical protein	gene	hypothetical protein	chr2	13847497	13848194	-	downstream
3	LOC_Os03g51940	unknown	gene	unknown	chr3	29785528	29785827	+	downstream
3	LOC_Os02g12570	pre-mRNA cleavage complex II protein Clp1, putative, expressed	gene	pre-mRNA cleavage complex II protein Clp1, putative, expressed	chr2	6568146	6572535	+	downstream
3	LOC_Os07g44200	transcription regulator, putative, expressed	gene	transcription regulator, putative, expressed	chr7	26411896	26413538	+	downstream
3	LOC_Os05g50410	Rad21 / Rec8 like protein, putative, expressed	gene	Rad21 / Rec8 like protein, putative, expressed	chr5	28826977	28834353	+	downstream
3	LOC_Os01g13930	expressed protein	gene	expressed protein	chr1	7803166	7804842	+	downstream
3	LOC_Os05g47970	microtubule associated protein, putative, expressed	gene	microtubule associated protein, putative, expressed	chr5	27442290	27446695	-	downstream
3	LOC_Os09g13575	hypothetical protein	gene	hypothetical protein	chr9	7871377	7872255	+	downstream
3	LOC_Os01g11940	osFTL1  FT-Like1 homologous to Flowering Locus T  gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed	gene	osFTL1  FT-Like1 homologous to Flowering Locus T  gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed	chr1	6493516	6498769	+	downstream
3	LOC_Os04g54180	serine/threonine-protein kinase receptor precursor, putative, expressed	gene	serine/threonine-protein kinase receptor precursor, putative, expressed	chr4	32088250	32091845	-	downstream
3	LOC_Os03g21880	THION28 - Plant thionin family protein precursor, expressed	gene	THION28 - Plant thionin family protein precursor, expressed	chr3	12513708	12514282	+	downstream
3	LOC_Os05g08510	glucosyltransferase, putative	gene	glucosyltransferase, putative	chr5	4644167	4645579	+	downstream
3	LOC_Os02g58540	RING-H2 finger protein, putative, expressed	gene	RING-H2 finger protein, putative, expressed	chr2	35777415	35778277	-	downstream
3	LOC_Os03g04494	unknown	gene	unknown	chr3	2096446	2096743	-	downstream
3	LOC_Os07g07940	hypothetical protein	gene	hypothetical protein	chr7	3987614	3989524	+	downstream
3	LOC_Os04g54630	expressed protein	gene	expressed protein	chr4	32296009	32296669	+	downstream
3	LOC_Os04g33250	conserved hypothetical protein	gene	conserved hypothetical protein	chr4	19943002	19943495	+	downstream
3	LOC_Os03g57260	GRF zinc finger family protein, expressed	gene	GRF zinc finger family protein, expressed	chr3	32648954	32653508	-	downstream
3	LOC_Os01g59740	expressed protein	gene	expressed protein	chr1	34557164	34558892	-	downstream
3	LOC_Os03g02370	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr3	832443	835807	+	downstream
3	LOC_Os04g37890	expressed protein	gene	expressed protein	chr4	22347119	22348588	+	downstream
3	LOC_Os12g02500	esterase, putative, expressed	gene	esterase, putative, expressed	chr12	853005	854382	+	downstream
3	LOC_Os03g26350	transposon protein, putative, CACTA, En/Spm sub-class	gene	transposon protein, putative, CACTA, En/Spm sub-class	chr3	15062839	15069163	+	downstream
3	LOC_Os02g13340	expressed protein	gene	expressed protein	chr2	7115786	7119634	+	downstream
3	LOC_Os12g02880	E2F-related protein, putative, expressed	gene	E2F-related protein, putative, expressed	chr12	1051828	1052879	+	downstream
3	LOC_Os01g18140	expressed protein	gene	expressed protein	chr1	10158735	10159654	+	downstream
3	LOC_Os01g19724	unknown	gene	unknown	chr1	11190808	11191318	+	downstream
3	LOC_Os02g10630	GRAM and C2 domains containing protein, putative, expressed	gene	GRAM and C2 domains containing protein, putative, expressed	chr2	5586939	5593645	-	downstream
3	LOC_Os01g21840	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr1	12249961	12256693	+	downstream
3	LOC_Os03g13540	Ser/Thr protein phosphatase family protein, putative, expressed	gene	Ser/Thr protein phosphatase family protein, putative, expressed	chr3	7321328	7324482	+	downstream
3	LOC_Os11g03150	retrotransposon protein, putative, SINE subclass	gene	retrotransposon protein, putative, SINE subclass	chr11	1132890	1133960	+	downstream
3	LOC_Os10g19180	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr10	9699576	9705359	+	downstream
3	LOC_Os10g26390	uncharacterized oxidoreductase, putative, expressed	gene	uncharacterized oxidoreductase, putative, expressed	chr10	13636978	13638527	+	downstream
3	LOC_Os07g46510	expressed protein	gene	expressed protein	chr7	27780063	27780999	+	downstream
3	LOC_Os03g03164	homeobox protein knotted-1, putative, expressed	gene	homeobox protein knotted-1, putative, expressed	chr3	1339050	1344293	+	downstream
3	LOC_Os10g21550	hypothetical protein	gene	hypothetical protein	chr10	10962762	10962983	+	downstream
3	LOC_Os04g33900	ctr copper transporter family protein, putative, expressed	gene	ctr copper transporter family protein, putative, expressed	chr4	20362115	20362818	+	downstream
3	LOC_Os06g03820	expressed protein	gene	expressed protein	chr6	1529111	1530687	+	downstream
3	LOC_Os09g27850	transcription regulator, putative, expressed	gene	transcription regulator, putative, expressed	chr9	16940832	16942437	+	downstream
3	LOC_Os07g49020	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	29350657	29350923	-	downstream
3	LOC_Os11g35189	unknown	gene	unknown	chr11	20168755	20169010	-	downstream
3	LOC_Os05g04060	plant protein of unknown function domain containing protein, expressed	gene	plant protein of unknown function domain containing protein, expressed	chr5	1828250	1830034	-	downstream
3	LOC_Os09g19550	SNARE domain containing protein, putative	gene	SNARE domain containing protein, putative	chr9	11699471	11701661	+	downstream
3	LOC_Os12g02900	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr12	1062020	1067900	+	downstream
3	LOC_Os05g45410	HSF-type DNA-binding domain containing protein, expressed	gene	HSF-type DNA-binding domain containing protein, expressed	chr5	26281777	26284252	+	downstream
3	LOC_Os01g16400	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr1	9313135	9317036	+	downstream
3	LOC_Os01g41980	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr1	23805080	23807809	+	downstream
3	LOC_Os03g03290	receptor-like protein kinase At3g46290 precursor, putative, expressed	gene	receptor-like protein kinase At3g46290 precursor, putative, expressed	chr3	1409000	1410832	+	downstream
3	LOC_Os11g10630	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr11	5827543	5829963	+	downstream
3	LOC_Os04g40110	hypothetical protein	gene	hypothetical protein	chr4	23695874	23696209	+	downstream
3	LOC_Os08g40070	hypothetical protein	gene	hypothetical protein	chr8	25367650	25368323	+	downstream
3	LOC_Os03g55250	cytochrome P450 81E1, putative, expressed	gene	cytochrome P450 81E1, putative, expressed	chr3	31441502	31442701	+	downstream
3	LOC_Os02g02830	ubiquitin-conjugating enzyme, putative, expressed	gene	ubiquitin-conjugating enzyme, putative, expressed	chr2	1078475	1079652	+	downstream
3	LOC_Os06g02330	expressed protein	gene	expressed protein	chr6	776223	778784	-	downstream
3	LOC_Os02g44700	zinc finger, C3HC4 type domain containing protein	gene	zinc finger, C3HC4 type domain containing protein	chr2	27077078	27077542	+	downstream
3	LOC_Os03g23960	IQ calmodulin-binding motif family protein, putative, expressed	gene	IQ calmodulin-binding motif family protein, putative, expressed	chr3	13601554	13604014	+	downstream
3	LOC_Os10g40920	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr10	21912415	21915797	+	downstream
3	LOC_Os08g14760	AMP-binding domain containing protein, expressed	gene	AMP-binding domain containing protein, expressed	chr8	8873183	8877931	+	downstream
3	LOC_Os11g24620	hypothetical protein	gene	hypothetical protein	chr11	13582986	13583639	-	downstream
3	LOC_Os11g03700	histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative	gene	histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative	chr11	1438180	1440578	-	downstream
3	LOC_Os04g48484	expressed protein	gene	expressed protein	chr4	28718090	28719298	-	downstream
3	LOC_Os08g12720	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr8	7536415	7538118	-	downstream
3	LOC_Os12g39360	aspartic proteinase nepenthesin precursor, putative, expressed	gene	aspartic proteinase nepenthesin precursor, putative, expressed	chr12	24178991	24181694	+	downstream
3	LOC_Os08g31680	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr8	19633263	19638868	-	downstream
3	LOC_Os03g53220	U5 small nuclear ribonucleoprotein 200 kDa helicase, putative	gene	U5 small nuclear ribonucleoprotein 200 kDa helicase, putative	chr3	30515962	30523987	+	downstream
3	LOC_Os05g34890	hypothetical protein	gene	hypothetical protein	chr5	20663952	20664754	+	downstream
3	LOC_Os10g38930	shikimate/quinate 5-dehydrogenase, putative, expressed	gene	shikimate/quinate 5-dehydrogenase, putative, expressed	chr10	20665462	20666792	+	downstream
3	LOC_Os07g03820	lectin-like receptor kinase, putative, expressed	gene	lectin-like receptor kinase, putative, expressed	chr7	1594360	1596614	-	downstream
3	LOC_Os08g32680	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr8	20238733	20244578	+	downstream
3	LOC_Os09g07350	fasciclin-like arabinogalactan protein 8 precursor, putative, expressed	gene	fasciclin-like arabinogalactan protein 8 precursor, putative, expressed	chr9	3653972	3657804	+	downstream
3	LOC_Os07g37550	chlorophyll A-B binding protein, putative, expressed	gene	chlorophyll A-B binding protein, putative, expressed	chr7	22486428	22487773	+	downstream
3	LOC_Os03g03520	hypothetical protein	gene	hypothetical protein	chr3	1520159	1521975	-	downstream
3	LOC_Os06g05730	expressed protein	gene	expressed protein	chr6	2586927	2587897	-	downstream
3	LOC_Os01g21170	expressed protein	gene	expressed protein	chr1	11809659	11810925	+	downstream
3	LOC_Os04g59050	hypothetical protein	gene	hypothetical protein	chr4	34942175	34942898	+	downstream
3	LOC_Os02g50210	erwinia induced protein 2, putative, expressed	gene	erwinia induced protein 2, putative, expressed	chr2	30652555	30653482	+	downstream
3	LOC_Os09g29160	expressed protein	gene	expressed protein	chr9	17730554	17732251	-	downstream
3	LOC_Os05g13360	expressed protein	gene	expressed protein	chr5	7415326	7416737	+	downstream
3	LOC_Os04g38300	hypothetical protein	gene	hypothetical protein	chr4	22607335	22608796	+	downstream
3	LOC_Os09g30310	core histone H2A/H2B/H3/H4, putative, expressed	gene	core histone H2A/H2B/H3/H4, putative, expressed	chr9	18450701	18451294	+	downstream
3	LOC_Os06g01660	integral membrane protein DUF6 domain containing protein, expressed	gene	integral membrane protein DUF6 domain containing protein, expressed	chr6	393397	396914	-	downstream
3	LOC_Os11g29180	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr11	16449549	16450334	+	downstream
3	LOC_Os11g24530	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr11	13522749	13524800	+	downstream
3	LOC_Os10g29230	MBTB49 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed	gene	MBTB49 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed	chr10	15147024	15148133	+	downstream
3	LOC_Os01g74020	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr1	42873163	42874471	-	downstream
3	LOC_Os04g59540	phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed	gene	phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed	chr4	35228123	35233722	+	downstream
3	LOC_Os06g16290	ribosomal protein L7Ae, putative, expressed	gene	ribosomal protein L7Ae, putative, expressed	chr6	9282141	9284251	+	downstream
3	LOC_Os03g15380	expressed protein	gene	expressed protein	chr3	8412113	8414004	+	downstream
3	LOC_Os04g40120	hypothetical protein	gene	hypothetical protein	chr4	23696705	23697190	-	downstream
3	LOC_Os12g26050	hypothetical protein	gene	hypothetical protein	chr12	15129078	15129791	+	downstream
3	LOC_Os08g38780	core histone H2A/H2B/H3/H4, putative, expressed	gene	core histone H2A/H2B/H3/H4, putative, expressed	chr8	24514884	24515858	+	downstream
3	LOC_Os08g25040	conserved hypothetical protein	gene	conserved hypothetical protein	chr8	15196156	15196437	+	downstream
3	LOC_Os11g03560	hypothetical protein	gene	hypothetical protein	chr11	1379713	1380036	+	downstream
3	LOC_Os12g39510	hypothetical protein	gene	hypothetical protein	chr12	24319972	24321734	+	downstream
3	LOC_Os01g10920	peptide-N4-asparagine amidase A, putative	gene	peptide-N4-asparagine amidase A, putative	chr1	5822869	5827251	-	downstream
3	LOC_Os01g65440	universal stress protein domain containing protein, putative, expressed	gene	universal stress protein domain containing protein, putative, expressed	chr1	37981806	37984667	+	downstream
3	LOC_Os01g51520	hypothetical protein	gene	hypothetical protein	chr1	29596372	29596878	-	downstream
3	LOC_Os02g17450	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr2	10040212	10042759	+	downstream
3	LOC_Os02g03030	ATXR, putative	gene	ATXR, putative	chr2	1190846	1192461	+	downstream
3	LOC_Os03g53524	hypothetical protein	gene	hypothetical protein	chr3	30693571	30693879	-	downstream
3	LOC_Os03g18960	calmodulin binding protein, putative, expressed	gene	calmodulin binding protein, putative, expressed	chr3	10616799	10619441	+	downstream
3	LOC_Os04g11780	resistance protein LR10, putative	gene	resistance protein LR10, putative	chr4	6443997	6447733	+	downstream
3	LOC_Os04g39250	RNA recognition motif family protein, expressed	gene	RNA recognition motif family protein, expressed	chr4	23169290	23170744	-	downstream
3	LOC_Os06g03970	receptor-like protein kinase 5 precursor, putative, expressed	gene	receptor-like protein kinase 5 precursor, putative, expressed	chr6	1604461	1611410	+	downstream
3	LOC_Os07g07460	hypothetical protein	gene	hypothetical protein	chr7	3716280	3716489	+	downstream
3	LOC_Os05g44380	MPPN domain containing protein, expressed	gene	MPPN domain containing protein, expressed	chr5	25757773	25760226	-	downstream
3	LOC_Os01g41970	hypothetical protein	gene	hypothetical protein	chr1	23800230	23800942	+	downstream
3	LOC_Os05g50650	ligA, putative, expressed	gene	ligA, putative, expressed	chr5	28971319	28972876	-	downstream
3	LOC_Os09g11260	hypothetical protein	gene	hypothetical protein	chr9	6249839	6250492	+	downstream
3	LOC_Os08g19160	transmembrane 9 superfamily member, putative, expressed	gene	transmembrane 9 superfamily member, putative, expressed	chr8	11459362	11461717	+	downstream
3	LOC_Os02g57310	pib, putative, expressed	gene	pib, putative, expressed	chr2	35107768	35112900	-	downstream
3	LOC_Os02g24010	hypothetical protein	gene	hypothetical protein	chr2	13909993	13910738	+	downstream
3	LOC_Os11g32380	expressed protein	gene	expressed protein	chr11	18660606	18661826	+	downstream
3	LOC_Os09g31458	expressed protein	gene	expressed protein	chr9	18956647	18958390	-	downstream
3	LOC_Os04g49480	legume lectins beta domain containing protein, putative	gene	legume lectins beta domain containing protein, putative	chr4	29328746	29329588	-	downstream
3	LOC_Os06g25520	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr6	14921637	14925142	+	downstream
3	LOC_Os01g05280	hypothetical protein	gene	hypothetical protein	chr1	2486387	2486986	+	downstream
3	LOC_Os01g26960	conserved hypothetical protein	gene	conserved hypothetical protein	chr1	15017080	15017358	-	downstream
3	LOC_Os02g39010	cyclin-dependent kinase G-1, putative, expressed	gene	cyclin-dependent kinase G-1, putative, expressed	chr2	23556407	23560284	+	downstream
3	LOC_Os07g33620	cytochrome P450 domain containing protein, expressed	gene	cytochrome P450 domain containing protein, expressed	chr7	20083707	20085619	+	downstream
3	LOC_Os02g42506	hypothetical protein	gene	hypothetical protein	chr2	25558141	25558718	-	downstream
3	LOC_Os07g15590	hypothetical protein	gene	hypothetical protein	chr7	9030776	9033466	-	downstream
3	LOC_Os03g10910	NB-ARC/LRR disease resistance protein, putative, expressed	gene	NB-ARC/LRR disease resistance protein, putative, expressed	chr3	5606032	5608758	+	downstream
3	LOC_Os03g22680	RING finger and CHY zinc finger domain-containing protein 1, putative, expressed	gene	RING finger and CHY zinc finger domain-containing protein 1, putative, expressed	chr3	13094516	13097003	-	downstream
3	LOC_Os05g51750	aspartyl protease family protein, putative, expressed	gene	aspartyl protease family protein, putative, expressed	chr5	29625805	29627822	+	downstream
3	LOC_Os07g27359	expressed protein	gene	expressed protein	chr7	15919712	15924788	-	downstream
3	LOC_Os12g37970	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr12	23291986	23293515	-	downstream
3	LOC_Os12g27980	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr12	16492630	16496392	-	downstream
3	LOC_Os05g33430	xyloglucanase inhibitor, putative, expressed	gene	xyloglucanase inhibitor, putative, expressed	chr5	19583141	19584882	+	downstream
3	LOC_Os08g42370	zinc finger DHHC domain-containing protein, putative, expressed	gene	zinc finger DHHC domain-containing protein, putative, expressed	chr8	26742080	26745771	-	downstream
3	LOC_Os12g44320	carbohydrate binding protein, putative, expressed	gene	carbohydrate binding protein, putative, expressed	chr12	27440868	27443702	+	downstream
3	LOC_Os02g53510	oxidoreductase/ transition metal ion binding protein, putative, expressed	gene	oxidoreductase/ transition metal ion binding protein, putative, expressed	chr2	32722550	32723558	-	downstream
3	LOC_Os01g70560	expressed protein	gene	expressed protein	chr1	40861743	40863357	-	downstream
3	LOC_Os02g38386	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr2	23203825	23204587	+	downstream
3	LOC_Os06g01220	hypothetical protein	gene	hypothetical protein	chr6	149985	151936	-	downstream
3	LOC_Os06g37410	helix-loop-helix DNA-binding domain containing protein	gene	helix-loop-helix DNA-binding domain containing protein	chr6	22118342	22122160	+	downstream
3	LOC_Os02g52770	expressed protein	gene	expressed protein	chr2	32267998	32269386	+	downstream
3	LOC_Os07g36140	core histone H2A/H2B/H3/H4, putative, expressed	gene	core histone H2A/H2B/H3/H4, putative, expressed	chr7	21591655	21592297	+	downstream
3	LOC_Os03g48080	CHCH domain containing protein, expressed	gene	CHCH domain containing protein, expressed	chr3	27336339	27339764	-	downstream
3	LOC_Os01g66270	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr1	38488482	38489126	+	downstream
3	LOC_Os10g39390	Eukaryotic aspartyl protease domain containing protein, expressed	gene	Eukaryotic aspartyl protease domain containing protein, expressed	chr10	20940268	20941692	+	downstream
3	LOC_Os11g37970	WIP5 - Wound-induced protein precursor, expressed	gene	WIP5 - Wound-induced protein precursor, expressed	chr11	22045377	22046275	+	downstream
3	LOC_Os06g29370	hypothetical protein	gene	hypothetical protein	chr6	16790222	16792143	+	downstream
3	LOC_Os12g07580	dirigent, putative, expressed	gene	dirigent, putative, expressed	chr12	3788861	3789726	+	downstream
3	LOC_Os06g05070	protein kinase domain containing protein, expressed	gene	protein kinase domain containing protein, expressed	chr6	2240347	2242213	-	downstream
3	LOC_Os05g40170	expressed protein	gene	expressed protein	chr5	23530459	23532685	-	downstream
3	LOC_Os11g14520	conserved hypothetical protein	gene	conserved hypothetical protein	chr11	8150495	8154000	-	downstream
3	LOC_Os02g56900	thioredoxin family protein, putative, expressed	gene	thioredoxin family protein, putative, expressed	chr2	34873611	34875225	-	downstream
3	LOC_Os03g63190	conserved hypothetical protein	gene	conserved hypothetical protein	chr3	35702296	35703178	+	downstream
3	LOC_Os12g07250	hypothetical protein	gene	hypothetical protein	chr12	3564998	3565556	+	downstream
3	LOC_Os03g27270	transposon protein, putative, Mutator sub-class	gene	transposon protein, putative, Mutator sub-class	chr3	15625189	15625851	+	downstream
3	LOC_Os06g30960	hypothetical protein	gene	hypothetical protein	chr6	18011565	18012696	+	downstream
3	LOC_Os03g08060	elongation factor Tu, putative, expressed	gene	elongation factor Tu, putative, expressed	chr3	4116595	4118531	+	downstream
3	LOC_Os04g43740	OsSAUR18 - Auxin-responsive SAUR gene family member, expressed	gene	OsSAUR18 - Auxin-responsive SAUR gene family member, expressed	chr4	25711608	25712364	+	downstream
3	LOC_Os04g53650	harpin-induced protein 1 domain containing protein, expressed	gene	harpin-induced protein 1 domain containing protein, expressed	chr4	31790614	31791282	+	downstream
3	LOC_Os02g50030	hypothetical protein	gene	hypothetical protein	chr2	30559979	30560890	+	downstream
3	LOC_Os08g10500	hypothetical protein	gene	hypothetical protein	chr8	6167474	6168046	+	downstream
3	LOC_Os04g57010	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	gene	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	chr4	33797846	33801144	+	downstream
3	LOC_Os05g02240	ATCHX20, putative, expressed	gene	ATCHX20, putative, expressed	chr5	711549	715994	+	downstream
3	LOC_Os04g39830	hypothetical protein	gene	hypothetical protein	chr4	23540070	23541903	+	downstream
3	LOC_Os11g38480	NBS-LRR type disease resistance protein, putative, expressed	gene	NBS-LRR type disease resistance protein, putative, expressed	chr11	22333159	22335987	+	downstream
3	LOC_Os06g36349	unknown	gene	unknown	chr6	21340454	21341106	-	downstream
3	LOC_Os04g32080	11-beta-hydroxysteroid dehydrogenase, putative, expressed	gene	11-beta-hydroxysteroid dehydrogenase, putative, expressed	chr4	19064692	19067282	+	downstream
3	LOC_Os05g05190	hypothetical protein	gene	hypothetical protein	chr5	2526990	2527433	-	downstream
3	LOC_Os06g37680	expressed protein	gene	expressed protein	chr6	22326747	22327918	-	downstream
3	LOC_Os02g18860	hypothetical protein	gene	hypothetical protein	chr2	11008117	11008963	+	downstream
3	LOC_Os11g04360	alpha/beta hydrolase fold, putative, expressed	gene	alpha/beta hydrolase fold, putative, expressed	chr11	1810714	1812624	+	downstream
3	LOC_Os03g51660	conserved hypothetical protein	gene	conserved hypothetical protein	chr3	29576157	29577873	-	downstream
3	LOC_Os01g37490	dynein light chain type 1 domain containing protein, expressed	gene	dynein light chain type 1 domain containing protein, expressed	chr1	20949356	20950896	-	downstream
3	LOC_Os08g20630	hypothetical protein	gene	hypothetical protein	chr8	12392785	12393003	-	downstream
3	LOC_Os06g48560	transferase family protein, putative, expressed	gene	transferase family protein, putative, expressed	chr6	29380139	29381657	+	downstream
3	LOC_Os02g55990	vesicle-associated membrane protein, putative, expressed	gene	vesicle-associated membrane protein, putative, expressed	chr2	34258114	34259947	+	downstream
3	LOC_Os09g02530	cyclin-like F-box, putative, expressed	gene	cyclin-like F-box, putative, expressed	chr9	1054332	1055395	+	downstream
3	LOC_Os10g37760	OsRhmbd17 - Putative Rhomboid homologue, expressed	gene	OsRhmbd17 - Putative Rhomboid homologue, expressed	chr10	20135822	20138052	+	downstream
3	LOC_Os12g01230	expressed protein	gene	expressed protein	chr12	132647	135179	+	downstream
3	LOC_Os02g28820	expressed protein	gene	expressed protein	chr2	17034107	17035485	+	downstream
3	LOC_Os05g46190	expressed protein	gene	expressed protein	chr5	26729380	26730996	+	downstream
3	LOC_Os09g23599	unknown	gene	unknown	chr9	14021696	14022026	+	downstream
3	LOC_Os11g09120	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr11	4851589	4854624	+	downstream
3	LOC_Os01g41760	hypothetical protein	gene	hypothetical protein	chr1	23636198	23636524	-	downstream
3	LOC_Os03g27330	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr3	15653296	15656409	+	downstream
3	LOC_Os06g25420	hypothetical protein	gene	hypothetical protein	chr6	14878479	14878996	+	downstream
3	LOC_Os01g48360	expressed protein	gene	expressed protein	chr1	27713496	27714275	+	downstream
3	LOC_Os12g07490	protein transport protein Sec61 subunit beta, putative, expressed	gene	protein transport protein Sec61 subunit beta, putative, expressed	chr12	3718827	3719078	+	downstream
3	LOC_Os04g44790	conserved hypothetical protein	gene	conserved hypothetical protein	chr4	26337849	26338413	+	downstream
3	LOC_Os03g46640	deoxyuridine 5-triphosphate nucleotidohydrolase, putative, expressed	gene	deoxyuridine 5-triphosphate nucleotidohydrolase, putative, expressed	chr3	26389337	26390553	-	downstream
3	LOC_Os03g14790	piwi domain containing protein, putative, expressed	gene	piwi domain containing protein, putative, expressed	chr3	8038454	8045693	+	downstream
3	LOC_Os11g14040	glutathione S-transferase, N-terminal domain containing protein, expressed	gene	glutathione S-transferase, N-terminal domain containing protein, expressed	chr11	7787909	7790606	+	downstream
3	LOC_Os03g16480	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr3	9083411	9084896	+	downstream
3	LOC_Os04g43324	G-patch domain containing protein, putative	gene	G-patch domain containing protein, putative	chr4	25441974	25446301	+	downstream
3	LOC_Os02g15960	hypothetical protein	gene	hypothetical protein	chr2	9051331	9051698	+	downstream
3	LOC_Os02g01780	hypothetical protein	gene	hypothetical protein	chr2	430227	430724	+	downstream
3	LOC_Os03g04700	retrotransposon, putative, centromere-specific	gene	retrotransposon, putative, centromere-specific	chr3	2240223	2241020	+	downstream
3	LOC_Os06g30810	OsMADS75 - MADS-box family gene with M-alpha type-box	gene	OsMADS75 - MADS-box family gene with M-alpha type-box	chr6	17868246	17868878	-	downstream
3	LOC_Os04g58480	EF hand family protein, putative, expressed	gene	EF hand family protein, putative, expressed	chr4	34602257	34605106	+	downstream
3	LOC_Os10g09280	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr10	5032788	5039452	+	downstream
3	LOC_Os04g38870	14-3-3 protein, putative, expressed	gene	14-3-3 protein, putative, expressed	chr4	22918895	22922448	+	downstream
3	LOC_Os01g01940	expressed protein	gene	expressed protein	chr1	509752	511159	+	downstream
3	LOC_Os10g10270	conserved hypothetical protein	gene	conserved hypothetical protein	chr10	5662626	5663411	+	downstream
3	LOC_Os01g44190	conserved hypothetical protein	gene	conserved hypothetical protein	chr1	25329895	25330215	-	downstream
3	LOC_Os09g37940	hypothetical protein	gene	hypothetical protein	chr9	21878722	21879228	+	downstream
3	LOC_Os03g39530	hypothetical protein	gene	hypothetical protein	chr3	21953622	21954964	+	downstream
3	LOC_Os01g48750	aspartic proteinase nepenthesin-2 precursor, putative, expressed	gene	aspartic proteinase nepenthesin-2 precursor, putative, expressed	chr1	27959318	27960500	+	downstream
3	LOC_Os01g58730	glycosyl hydrolases family 17, putative, expressed	gene	glycosyl hydrolases family 17, putative, expressed	chr1	33948343	33950587	-	downstream
3	LOC_Os10g02960	retrotransposon protein, putative, Ty1-copia subclass, expressed	gene	retrotransposon protein, putative, Ty1-copia subclass, expressed	chr10	1216506	1221180	-	downstream
3	LOC_Os06g08130	hypothetical protein	gene	hypothetical protein	chr6	3945826	3946690	-	downstream
3	LOC_Os10g25349	hypothetical protein	gene	hypothetical protein	chr10	13040083	13040832	+	downstream
3	LOC_Os03g37100	DTW domain containing protein, putative, expressed	gene	DTW domain containing protein, putative, expressed	chr3	20561833	20563577	+	downstream
3	LOC_Os11g10410	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr11	5645486	5647689	+	downstream
3	LOC_Os01g13560	membrane associated DUF588 domain containing protein, putative, expressed	gene	membrane associated DUF588 domain containing protein, putative, expressed	chr1	7587191	7588633	+	downstream
3	LOC_Os01g07710	hypothetical protein	gene	hypothetical protein	chr1	3701448	3703723	+	downstream
3	LOC_Os04g42460	G-patch domain containing protein	gene	G-patch domain containing protein	chr4	24938243	24940125	+	downstream
3	LOC_Os05g27749	conserved hypothetical protein	gene	conserved hypothetical protein	chr5	16104097	16105314	+	downstream
3	LOC_Os06g11510	expressed protein	gene	expressed protein	chr6	6100062	6101118	+	downstream
3	LOC_Os07g36610	CSLF9 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed	gene	CSLF9 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed	chr7	21900512	21907500	-	downstream
3	LOC_Os05g46300	OsFBX172 - F-box domain containing protein	gene	OsFBX172 - F-box domain containing protein	chr5	26778780	26780411	-	downstream
3	LOC_Os06g29450	expressed protein	gene	expressed protein	chr6	16876332	16877693	+	downstream
3	LOC_Os01g70540	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr1	40850960	40856773	+	downstream
3	LOC_Os04g52400	oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed	gene	oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed	chr4	30954063	30956535	+	downstream
3	LOC_Os07g32880	ATP synthase gamma chain, putative, expressed	gene	ATP synthase gamma chain, putative, expressed	chr7	19654998	19656610	-	downstream
3	LOC_Os02g19430	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	11352154	11352673	+	downstream
3	LOC_Os09g10660	hypothetical protein	gene	hypothetical protein	chr9	5816870	5818446	-	downstream
3	LOC_Os01g47070	glycosyl hydrolase, putative, expressed	gene	glycosyl hydrolase, putative, expressed	chr1	26884440	26885710	+	downstream
3	LOC_Os07g06560	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr7	3187807	3188566	+	downstream
3	LOC_Os09g39780	peptidyl-prolyl cis-trans isomerase, putative, expressed	gene	peptidyl-prolyl cis-trans isomerase, putative, expressed	chr9	22809423	22810523	+	downstream
3	LOC_Os06g08460	exo70 exocyst complex subunit, putative	gene	exo70 exocyst complex subunit, putative	chr6	4160338	4161798	+	downstream
3	LOC_Os01g74300	metallothionein, putative, expressed	gene	metallothionein, putative, expressed	chr1	43045911	43046917	+	downstream
3	LOC_Os03g25950	hypothetical protein	gene	hypothetical protein	chr3	14861993	14864162	-	downstream
3	LOC_Os07g04880	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr7	2154905	2156553	-	downstream
3	LOC_Os08g14630	hypothetical protein	gene	hypothetical protein	chr8	8799958	8800808	+	downstream
3	LOC_Os09g36850	expressed protein	gene	expressed protein	chr9	21251361	21252385	-	downstream
3	LOC_Os04g23590	hypothetical protein	gene	hypothetical protein	chr4	13500916	13501951	+	downstream
3	LOC_Os01g12220	uncharacterized protein family UPF0016 domain containing protein, expressed	gene	uncharacterized protein family UPF0016 domain containing protein, expressed	chr1	6662533	6664460	+	downstream
3	LOC_Os02g21770	hypothetical protein	gene	hypothetical protein	chr2	12940359	12940869	-	downstream
3	LOC_Os09g39020	N-rich protein, putative, expressed	gene	N-rich protein, putative, expressed	chr9	22399588	22403888	+	downstream
3	LOC_Os04g50212	conserved hypothetical protein	gene	conserved hypothetical protein	chr4	29788173	29788715	-	downstream
3	LOC_Os03g46900	hypothetical protein	gene	hypothetical protein	chr3	26516418	26518643	-	downstream
3	LOC_Os01g42400	STE_MEK_ste7_MAP2K.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast	gene	STE_MEK_ste7_MAP2K.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast	chr1	24102305	24104785	-	downstream
3	LOC_Os04g45665	expressed protein	gene	expressed protein	chr4	26828376	26829069	+	downstream
3	LOC_Os01g47400	OsMan01 - Endo-Beta-Mannanase, expressed	gene	OsMan01 - Endo-Beta-Mannanase, expressed	chr1	27080762	27084637	+	downstream
3	LOC_Os04g38600	glyceraldehyde-3-phosphate dehydrogenase, putative, expressed	gene	glyceraldehyde-3-phosphate dehydrogenase, putative, expressed	chr4	22751948	22753965	+	downstream
3	LOC_Os05g10570	expressed protein	gene	expressed protein	chr5	5749536	5750961	+	downstream
3	LOC_Os04g35790	GLTP domain containing protein, putative, expressed	gene	GLTP domain containing protein, putative, expressed	chr4	21640207	21644228	-	downstream
3	LOC_Os02g03880	hypothetical protein	gene	hypothetical protein	chr2	1650815	1651072	+	downstream
3	LOC_Os04g46720	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr4	27513992	27514504	-	downstream
3	LOC_Os01g18090	expressed protein	gene	expressed protein	chr1	10135458	10136031	+	downstream
3	LOC_Os02g52300	CPuORF38 - conserved peptide uORF-containing transcript, expressed	gene	CPuORF38 - conserved peptide uORF-containing transcript, expressed	chr2	32015703	32017364	+	downstream
3	LOC_Os02g48540	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr2	29708013	29709564	-	downstream
3	LOC_Os03g56290	conserved hypothetical protein	gene	conserved hypothetical protein	chr3	32083410	32084285	-	downstream
3	LOC_Os05g06010	hypothetical protein	gene	hypothetical protein	chr5	3007880	3008321	+	downstream
3	LOC_Os01g71549	hypothetical protein	gene	hypothetical protein	chr1	41448515	41450375	-	downstream
3	LOC_Os09g35900	expressed protein	gene	expressed protein	chr9	20659231	20659890	+	downstream
3	LOC_Os01g70480	conserved hypothetical protein	gene	conserved hypothetical protein	chr1	40821237	40822779	-	downstream
3	LOC_Os02g09330	cytochrome P450, putative	gene	cytochrome P450, putative	chr2	4800371	4802379	+	downstream
3	LOC_Os01g62210	50S ribosomal protein L17, putative, expressed	gene	50S ribosomal protein L17, putative, expressed	chr1	36006323	36008931	+	downstream
3	LOC_Os03g11190	expressed protein	gene	expressed protein	chr3	5757094	5758400	-	downstream
3	LOC_Os11g04060	major facilitator superfamily antiporter, putative	gene	major facilitator superfamily antiporter, putative	chr11	1640193	1644545	-	downstream
3	LOC_Os03g19330	glycosyltransferase, putative, expressed	gene	glycosyltransferase, putative, expressed	chr3	10863411	10864991	+	downstream
3	LOC_Os12g10910	A/G-specific adenine DNA glycosylase, putative, expressed	gene	A/G-specific adenine DNA glycosylase, putative, expressed	chr12	5900087	5901753	+	downstream
3	LOC_Os01g46230	tetratricopeptide-like helical, putative	gene	tetratricopeptide-like helical, putative	chr1	26292161	26293957	+	downstream
3	LOC_Os06g21610	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr6	12463880	12469800	-	downstream
3	LOC_Os08g43290	LTPL44 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	gene	LTPL44 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	chr8	27361447	27362123	+	downstream
3	LOC_Os10g36229	mov34/MPN/PAD-1 family protein	gene	mov34/MPN/PAD-1 family protein	chr10	19292563	19302363	+	downstream
3	LOC_Os04g42830	transferase family protein, putative	gene	transferase family protein, putative	chr4	25161740	25163181	-	downstream
3	LOC_Os06g05359	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr6	2409177	2417569	+	downstream
3	LOC_Os08g41570	hypothetical protein	gene	hypothetical protein	chr8	26257137	26260191	+	downstream
3	LOC_Os02g09580	OsFBX39 - F-box domain containing protein	gene	OsFBX39 - F-box domain containing protein	chr2	4931298	4935969	+	downstream
3	LOC_Os10g40040	expressed protein	gene	expressed protein	chr10	21372734	21373964	-	downstream
3	LOC_Os10g42299	mitochondrial carrier protein, putative, expressed	gene	mitochondrial carrier protein, putative, expressed	chr10	22703427	22708778	-	downstream
3	LOC_Os03g44835	expressed protein	gene	expressed protein	chr3	25289003	25294412	-	downstream
3	LOC_Os02g46910	glycosyl hydrolases family 16, putative, expressed	gene	glycosyl hydrolases family 16, putative, expressed	chr2	28616113	28618814	+	downstream
3	LOC_Os06g08880	glutamate receptor 2.7 precursor, putative, expressed	gene	glutamate receptor 2.7 precursor, putative, expressed	chr6	4458008	4462883	+	downstream
3	LOC_Os04g58120	CRP2 - Cysteine-rich family protein precursor, expressed	gene	CRP2 - Cysteine-rich family protein precursor, expressed	chr4	34427482	34428503	+	downstream
3	LOC_Os04g32920	potassium transporter, putative, expressed	gene	potassium transporter, putative, expressed	chr4	19714710	19720528	+	downstream
3	LOC_Os05g51440	hsp20/alpha crystallin family protein, putative, expressed	gene	hsp20/alpha crystallin family protein, putative, expressed	chr5	29431929	29433071	+	downstream
3	LOC_Os03g21930	hypothetical protein	gene	hypothetical protein	chr3	12539296	12539622	-	downstream
3	LOC_Os05g48740	expressed protein	gene	expressed protein	chr5	27872804	27873278	+	downstream
3	LOC_Os09g07760	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr9	3923525	3926665	-	downstream
3	LOC_Os07g25660	hypothetical protein	gene	hypothetical protein	chr7	14711307	14713384	+	downstream
3	LOC_Os06g12140	conserved hypothetical protein	gene	conserved hypothetical protein	chr6	6491885	6493715	+	downstream
3	LOC_Os08g45060	protein Kinase-like protein TMKL1 precursor, putative, expressed	gene	protein Kinase-like protein TMKL1 precursor, putative, expressed	chr8	28287371	28289932	-	downstream
3	LOC_Os10g01530	helix-loop-helix DNA-binding domain containing protein, expressed	gene	helix-loop-helix DNA-binding domain containing protein, expressed	chr10	343330	346794	+	downstream
3	LOC_Os08g34330	SMP-30/Gluconolaconase/LRE-like region containing protein, expressed	gene	SMP-30/Gluconolaconase/LRE-like region containing protein, expressed	chr8	21546863	21548614	-	downstream
3	LOC_Os02g06380	plant-specific domain TIGR01627 family protein, expressed	gene	plant-specific domain TIGR01627 family protein, expressed	chr2	3187939	3190188	-	downstream
3	LOC_Os01g59920	cysteine synthase, chloroplast precursor, putative, expressed	gene	cysteine synthase, chloroplast precursor, putative, expressed	chr1	34645994	34649728	-	downstream
3	LOC_Os03g17432	pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative	gene	pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative	chr3	9698113	9699327	+	downstream
3	LOC_Os12g34460	auxin-binding protein 4 precursor, putative, expressed	gene	auxin-binding protein 4 precursor, putative, expressed	chr12	20835966	20837570	+	downstream
3	LOC_Os05g08390	expressed protein	gene	expressed protein	chr5	4578868	4579536	-	downstream
3	LOC_Os02g55370	60S ribosomal protein L39, putative, expressed	gene	60S ribosomal protein L39, putative, expressed	chr2	33908132	33908773	+	downstream
3	LOC_Os03g03010	hypothetical protein	gene	hypothetical protein	chr3	1228806	1229350	-	downstream
3	LOC_Os05g50150	hypothetical protein	gene	hypothetical protein	chr5	28676727	28677002	-	downstream
3	LOC_Os03g27750	hypothetical protein	gene	hypothetical protein	chr3	15904232	15905511	+	downstream
3	LOC_Os05g51650	LSM domain containing protein, expressed	gene	LSM domain containing protein, expressed	chr5	29560547	29562155	+	downstream
3	LOC_Os05g44120	expressed protein	gene	expressed protein	chr5	25587796	25589711	+	downstream
3	LOC_Os01g06260	hypothetical protein	gene	hypothetical protein	chr1	2968154	2969731	+	downstream
3	LOC_Os05g33700	4F5 protein family protein	gene	4F5 protein family protein	chr5	19771484	19775826	+	downstream
3	LOC_Os01g58500	expressed protein	gene	expressed protein	chr1	33811712	33814083	-	downstream
3	LOC_Os02g27330	expressed protein	gene	expressed protein	chr2	16098367	16098705	+	downstream
3	LOC_Os06g40140	hypothetical protein	gene	hypothetical protein	chr6	23889744	23890337	-	downstream
3	LOC_Os04g58370	expressed protein	gene	expressed protein	chr4	34547660	34548235	+	downstream
3	LOC_Os02g21450	hypothetical protein	gene	hypothetical protein	chr2	12730855	12731109	+	downstream
3	LOC_Os07g46980	sex determination protein tasselseed-2, putative, expressed	gene	sex determination protein tasselseed-2, putative, expressed	chr7	28072374	28073875	+	downstream
3	LOC_Os05g39400	expressed protein	gene	expressed protein	chr5	23048738	23050201	+	downstream
3	LOC_Os05g38620	ZOS5-10 - C2H2 zinc finger protein	gene	ZOS5-10 - C2H2 zinc finger protein	chr5	22585858	22586478	+	downstream
3	LOC_Os05g45200	anthocyanidin 5,3-O-glucosyltransferase, putative, expressed	gene	anthocyanidin 5,3-O-glucosyltransferase, putative, expressed	chr5	26172970	26174486	-	downstream
3	LOC_Os11g32950	conserved hypothetical protein	gene	conserved hypothetical protein	chr11	19009425	19010306	+	downstream
3	LOC_Os04g52164	transferase family protein, putative, expressed	gene	transferase family protein, putative, expressed	chr4	30810218	30814480	+	downstream
3	LOC_Os09g36340	HVA22, putative, expressed	gene	HVA22, putative, expressed	chr9	20971299	20974745	-	downstream
3	LOC_Os09g35740	expressed protein	gene	expressed protein	chr9	20557515	20558683	+	downstream
3	LOC_Os12g13560	hypothetical protein	gene	hypothetical protein	chr12	7608254	7608580	+	downstream
3	LOC_Os02g33130	pectinesterase inhibitor domain containing protein, putative, expressed	gene	pectinesterase inhibitor domain containing protein, putative, expressed	chr2	19702791	19703464	-	downstream
3	LOC_Os07g03860	lectin-like receptor kinase 7, putative, expressed	gene	lectin-like receptor kinase 7, putative, expressed	chr7	1609227	1611424	-	downstream
3	LOC_Os03g07330	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr3	3723580	3725492	+	downstream
3	LOC_Os12g41850	hypothetical protein	gene	hypothetical protein	chr12	25884957	25886877	+	downstream
3	LOC_Os04g24700	conserved hypothetical protein	gene	conserved hypothetical protein	chr4	14171396	14173870	+	downstream
3	LOC_Os07g10240	anthocyanidin 3-O-glucosyltransferase, putative	gene	anthocyanidin 3-O-glucosyltransferase, putative	chr7	5496491	5497990	+	downstream
3	LOC_Os09g12590	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr9	7217962	7219515	+	downstream
3	LOC_Os06g45240	inactive receptor kinase At2g26730 precursor, putative, expressed	gene	inactive receptor kinase At2g26730 precursor, putative, expressed	chr6	27334850	27338390	-	downstream
3	LOC_Os04g41030	inactive receptor kinase At1g27190 precursor, putative, expressed	gene	inactive receptor kinase At1g27190 precursor, putative, expressed	chr4	24162883	24165733	+	downstream
3	LOC_Os10g31510	glycine-rich cell wall structural protein 2 precursor, putative, expressed	gene	glycine-rich cell wall structural protein 2 precursor, putative, expressed	chr10	16436259	16437050	-	downstream
3	LOC_Os12g34500	expressed protein	gene	expressed protein	chr12	20851271	20852959	+	downstream
3	LOC_Os07g26420	hypothetical protein	gene	hypothetical protein	chr7	15183587	15186310	+	downstream
3	LOC_Os04g31330	exo70 exocyst complex subunit domain containing protein, expressed	gene	exo70 exocyst complex subunit domain containing protein, expressed	chr4	18568630	18571373	+	downstream
3	LOC_Os09g32650	leucyl-tRNA synthetase, cytoplasmic, putative, expressed	gene	leucyl-tRNA synthetase, cytoplasmic, putative, expressed	chr9	19472047	19476757	+	downstream
3	LOC_Os06g49110	delta-aminolevulinic acid dehydratase, chloroplast precursor, putative, expressed	gene	delta-aminolevulinic acid dehydratase, chloroplast precursor, putative, expressed	chr6	29756047	29760837	-	downstream
3	LOC_Os01g05680	geranylgeranyl transferase type-1 subunit beta, putative	gene	geranylgeranyl transferase type-1 subunit beta, putative	chr1	2712412	2715075	+	downstream
3	LOC_Os09g39730	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	gene	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	chr9	22790805	22792389	-	downstream
3	LOC_Os05g33580	expressed protein	gene	expressed protein	chr5	19677390	19678289	+	downstream
3	LOC_Os10g41190	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr10	22052751	22056299	+	downstream
3	LOC_Os06g44180	NAD dependent epimerase/dehydratase family protein, putative, expressed	gene	NAD dependent epimerase/dehydratase family protein, putative, expressed	chr6	26651832	26658266	-	downstream
3	LOC_Os06g22370	hypothetical protein	gene	hypothetical protein	chr6	12987185	12989509	+	downstream
3	LOC_Os04g52110	late embryogenesis abundant protein, group 3, putative, expressed	gene	late embryogenesis abundant protein, group 3, putative, expressed	chr4	30765819	30766994	+	downstream
3	LOC_Os04g26250	retrotransposon protein, putative, LINE subclass	gene	retrotransposon protein, putative, LINE subclass	chr4	15300515	15302774	+	downstream
3	LOC_Os04g43480	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr4	25537943	25540873	-	downstream
3	LOC_Os01g12240	hypothetical protein	gene	hypothetical protein	chr1	6688709	6692866	+	downstream
3	LOC_Os01g55820	X8 domain containing protein, expressed	gene	X8 domain containing protein, expressed	chr1	32144780	32146321	-	downstream
3	LOC_Os02g18080	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr2	10503047	10508539	+	downstream
3	LOC_Os06g43780	expressed protein	gene	expressed protein	chr6	26354718	26358086	-	downstream
3	LOC_Os10g32509	expressed protein	gene	expressed protein	chr10	16954513	16955160	-	downstream
3	LOC_Os07g23720	B4-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed	gene	B4-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed	chr7	13383453	13385056	+	downstream
3	LOC_Os01g71210	expressed protein	gene	expressed protein	chr1	41200429	41201259	-	downstream
3	LOC_Os08g38050	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr8	24104809	24107916	-	downstream
3	LOC_Os02g39150	hypothetical protein	gene	hypothetical protein	chr2	23646114	23646626	+	downstream
3	LOC_Os03g10970	hypothetical protein	gene	hypothetical protein	chr3	5634416	5636467	+	downstream
3	LOC_Os03g01930	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr3	570440	573064	+	downstream
3	LOC_Os05g39380	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr5	23039112	23041594	+	downstream
3	LOC_Os01g40970	DUF623 domain containing protein	gene	DUF623 domain containing protein	chr1	23172596	23173336	+	downstream
3	LOC_Os01g59720	expressed protein	gene	expressed protein	chr1	34546734	34548310	-	downstream
3	LOC_Os03g47960	expressed protein	gene	expressed protein	chr3	27258613	27261631	-	downstream
3	LOC_Os04g36900	expressed protein	gene	expressed protein	chr4	22079495	22081499	+	downstream
3	LOC_Os03g03630	expressed protein	gene	expressed protein	chr3	1607017	1608051	-	downstream
3	LOC_Os01g24080	hypothetical protein	gene	hypothetical protein	chr1	13576925	13580183	+	downstream
3	LOC_Os01g68300	expressed protein	gene	expressed protein	chr1	39681791	39682399	-	downstream
3	LOC_Os03g24320	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr3	13837915	13838145	+	downstream
3	LOC_Os05g47510	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr5	27156371	27157693	+	downstream
3	LOC_Os08g41980	conserved hypothetical protein	gene	conserved hypothetical protein	chr8	26527604	26527825	+	downstream
3	LOC_Os08g43890	carrier, putative	gene	carrier, putative	chr8	27670884	27671609	+	downstream
3	LOC_Os06g42000	peroxiredoxin, putative, expressed	gene	peroxiredoxin, putative, expressed	chr6	25213054	25214328	+	downstream
3	LOC_Os02g27210	expressed protein	gene	expressed protein	chr2	16000553	16003428	+	downstream
3	LOC_Os02g49770	NHL repeat-containing protein, putative, expressed	gene	NHL repeat-containing protein, putative, expressed	chr2	30421851	30425872	+	downstream
3	LOC_Os03g11069	unknown	gene	unknown	chr3	5694656	5695566	+	downstream
3	LOC_Os01g59265	expressed protein	gene	expressed protein	chr1	34258092	34258747	+	downstream
3	LOC_Os06g41630	hypothetical protein	gene	hypothetical protein	chr6	24927488	24928347	-	downstream
3	LOC_Os03g46420	expressed protein	gene	expressed protein	chr3	26244572	26245679	+	downstream
3	LOC_Os02g05780	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	2842900	2847426	+	downstream
3	LOC_Os10g25100	expressed protein	gene	expressed protein	chr10	12866880	12868519	-	downstream
3	LOC_Os02g49555	expressed protein	gene	expressed protein	chr2	30284693	30287854	-	downstream
3	LOC_Os07g38000	cytochrome c, putative, expressed	gene	cytochrome c, putative, expressed	chr7	22797826	22799264	-	downstream
3	LOC_Os08g35920	transposon protein, putative, Pong sub-class	gene	transposon protein, putative, Pong sub-class	chr8	22650544	22652270	+	downstream
3	LOC_Os01g37140	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr1	20743252	20744740	+	downstream
3	LOC_Os10g02750	Ser/Thr protein phosphatase family protein, putative, expressed	gene	Ser/Thr protein phosphatase family protein, putative, expressed	chr10	1081886	1083960	+	downstream
3	LOC_Os08g06885	expressed protein	gene	expressed protein	chr8	3843471	3844155	+	downstream
3	LOC_Os10g30200	SKP1-like protein 1B, putative	gene	SKP1-like protein 1B, putative	chr10	15624448	15625224	+	downstream
3	LOC_Os04g40900	exonuclease, putative	gene	exonuclease, putative	chr4	24091451	24093179	+	downstream
3	LOC_Os11g06440	expressed protein	gene	expressed protein	chr11	3106479	3108333	+	downstream
3	LOC_Os01g16030	ADP-ribosylation factor, putative, expressed	gene	ADP-ribosylation factor, putative, expressed	chr1	9018841	9023052	-	downstream
3	LOC_Os07g38410	YABBY domain containing protein, putative, expressed	gene	YABBY domain containing protein, putative, expressed	chr7	23085441	23087531	+	downstream
3	LOC_Os03g17330	expressed protein	gene	expressed protein	chr3	9644476	9645477	+	downstream
3	LOC_Os04g53996	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr4	31998674	31999444	-	downstream
3	LOC_Os01g73270	expressed protein	gene	expressed protein	chr1	42469283	42470806	+	downstream
3	LOC_Os09g16320	hypothetical protein	gene	hypothetical protein	chr9	9967753	9968102	-	downstream
3	LOC_Os04g51160	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr4	30106333	30107912	-	downstream
3	LOC_Os09g02410	S-domain receptor-like protein kinase, putative	gene	S-domain receptor-like protein kinase, putative	chr9	995050	996725	-	downstream
3	LOC_Os01g54740	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr1	31496630	31497374	+	downstream
3	LOC_Os09g32410	OsFBX333 - F-box domain containing protein, expressed	gene	OsFBX333 - F-box domain containing protein, expressed	chr9	19351994	19356649	-	downstream
3	LOC_Os12g11730	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr12	6361141	6364552	-	downstream
3	LOC_Os10g42620	dihydroflavonol-4-reductase, putative, expressed	gene	dihydroflavonol-4-reductase, putative, expressed	chr10	22910074	22914797	+	downstream
3	LOC_Os10g35050	aquaporin protein, putative, expressed	gene	aquaporin protein, putative, expressed	chr10	18629689	18631118	+	downstream
3	LOC_Os06g10350	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr6	5314179	5315876	+	downstream
3	LOC_Os03g51920	peptidase, M50 family, putative, expressed	gene	peptidase, M50 family, putative, expressed	chr3	29777653	29780055	-	downstream
3	LOC_Os06g13150	hypothetical protein	gene	hypothetical protein	chr6	7215474	7216002	+	downstream
3	LOC_Os07g20140	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	11629188	11629415	-	downstream
3	LOC_Os07g35860	plastocyanin-like domain containing protein, putative, expressed	gene	plastocyanin-like domain containing protein, putative, expressed	chr7	21464227	21465385	+	downstream
3	LOC_Os12g27335	expressed protein	gene	expressed protein	chr12	16058677	16059285	+	downstream
3	LOC_Os06g36390	expressed protein	gene	expressed protein	chr6	21371366	21373442	+	downstream
3	LOC_Os01g69100	expressed protein	gene	expressed protein	chr1	40166697	40169210	+	downstream
3	LOC_Os04g53370	acyltransferase, putative, expressed	gene	acyltransferase, putative, expressed	chr4	31601482	31603139	+	downstream
3	LOC_Os01g02160	hydroxyproline-rich glycoprotein family protein, putative, expressed	gene	hydroxyproline-rich glycoprotein family protein, putative, expressed	chr1	631093	631913	+	downstream
3	LOC_Os11g32859	hypothetical protein	gene	hypothetical protein	chr11	18946131	18946829	+	downstream
3	LOC_Os04g35750	expressed protein	gene	expressed protein	chr4	21619557	21620350	-	downstream
3	LOC_Os03g01960	expressed protein	gene	expressed protein	chr3	597918	598958	+	downstream
3	LOC_Os05g08554	expressed protein	gene	expressed protein	chr5	4665241	4667896	-	downstream
3	LOC_Os06g23440	eukaryotic translation initiation factor 1A, putative, expressed	gene	eukaryotic translation initiation factor 1A, putative, expressed	chr6	13684423	13685181	+	downstream
3	LOC_Os04g21850	hypothetical protein	gene	hypothetical protein	chr4	12372746	12373042	-	downstream
3	LOC_Os01g18280	SNF7 domain containing protein, putative, expressed	gene	SNF7 domain containing protein, putative, expressed	chr1	10261922	10266938	+	downstream
3	LOC_Os05g49900	3-ketoacyl-CoA synthase, putative, expressed	gene	3-ketoacyl-CoA synthase, putative, expressed	chr5	28562525	28564905	-	downstream
3	LOC_Os04g58100	expressed protein	gene	expressed protein	chr4	34416112	34419821	-	downstream
3	LOC_Os12g42064	OsWAK129c - OsWAK receptor-like protein kinase	gene	OsWAK129c - OsWAK receptor-like protein kinase	chr12	26059665	26064338	-	downstream
3	LOC_Os06g10890	sterol carrier protein-2, putative, expressed	gene	sterol carrier protein-2, putative, expressed	chr6	5687536	5689096	+	downstream
3	LOC_Os07g02340	expressed protein	gene	expressed protein	chr7	796572	797722	+	downstream
3	LOC_Os03g04610	expressed protein	gene	expressed protein	chr3	2153641	2154715	+	downstream
3	LOC_Os07g23190	lysine ketoglutarate reductase trans-splicing related 1, putative	gene	lysine ketoglutarate reductase trans-splicing related 1, putative	chr7	13071315	13072487	+	downstream
3	LOC_Os08g44360	male sterility protein 2, putative, expressed	gene	male sterility protein 2, putative, expressed	chr8	27913599	27919903	+	downstream
3	LOC_Os12g02800	CRP11 - Cysteine-rich family protein precursor, expressed	gene	CRP11 - Cysteine-rich family protein precursor, expressed	chr12	987530	988874	-	downstream
3	LOC_Os05g40960	Myb transcription factor, putative, expressed	gene	Myb transcription factor, putative, expressed	chr5	23952663	23954996	-	downstream
3	LOC_Os06g01280	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr6	179215	180423	+	downstream
3	LOC_Os12g08050	nodulation receptor kinase precursor, putative	gene	nodulation receptor kinase precursor, putative	chr12	4090708	4092044	-	downstream
3	LOC_Os02g58640	tumor susceptibility gene 101, putative, expressed	gene	tumor susceptibility gene 101, putative, expressed	chr2	35830928	35832496	-	downstream
3	LOC_Os01g17040	heat shock protein DnaJ, putative	gene	heat shock protein DnaJ, putative	chr1	9763949	9765457	+	downstream
3	LOC_Os10g06700	OsFBX375 - F-box domain containing protein, expressed	gene	OsFBX375 - F-box domain containing protein, expressed	chr10	3466983	3468297	+	downstream
3	LOC_Os02g09120	isoleucyl-tRNA synthetase, cytoplasmic, putative	gene	isoleucyl-tRNA synthetase, cytoplasmic, putative	chr2	4676847	4679922	-	downstream
3	LOC_Os12g30610	expressed protein	gene	expressed protein	chr12	18355081	18357179	+	downstream
3	LOC_Os03g08670	hypothetical protein	gene	hypothetical protein	chr3	4466631	4467589	+	downstream
3	LOC_Os05g49164	expressed protein	gene	expressed protein	chr5	28147762	28149880	+	downstream
3	LOC_Os07g33040	hypothetical protein	gene	hypothetical protein	chr7	19735461	19735961	+	downstream
3	LOC_Os04g57130	dirigent-like protein pDIR17, putative, expressed	gene	dirigent-like protein pDIR17, putative, expressed	chr4	33853246	33854320	-	downstream
3	LOC_Os01g71599	hypothetical protein	gene	hypothetical protein	chr1	41479488	41481348	-	downstream
3	LOC_Os09g36619	expressed protein	gene	expressed protein	chr9	21131313	21133760	-	downstream
3	LOC_Os05g35160	clathrin assembly protein, putative, expressed	gene	clathrin assembly protein, putative, expressed	chr5	20815419	20817369	+	downstream
3	LOC_Os04g32870	pentatricopeptide repeat-containing protein, putative	gene	pentatricopeptide repeat-containing protein, putative	chr4	19677154	19678614	+	downstream
3	LOC_Os09g22490	hypothetical protein	gene	hypothetical protein	chr9	13568371	13568598	+	downstream
3	LOC_Os01g31610	tyrosyl-tRNA synthetase, putative, expressed	gene	tyrosyl-tRNA synthetase, putative, expressed	chr1	17300921	17302677	+	downstream
3	LOC_Os03g24590	mTERF domain containing protein, expressed	gene	mTERF domain containing protein, expressed	chr3	14004872	14006073	+	downstream
3	LOC_Os04g36750	hsp20/alpha crystallin family protein, putative, expressed	gene	hsp20/alpha crystallin family protein, putative, expressed	chr4	22015880	22016822	+	downstream
3	LOC_Os02g52870	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr2	32318447	32320234	+	downstream
3	LOC_Os05g39230	low photochemical bleaching 1 protein, putative, expressed	gene	low photochemical bleaching 1 protein, putative, expressed	chr5	22934337	22942985	+	downstream
3	LOC_Os04g32480	zinc-finger protein, putative, expressed	gene	zinc-finger protein, putative, expressed	chr4	19320612	19325192	+	downstream
3	LOC_Os06g40784	expressed protein	gene	expressed protein	chr6	24330145	24330632	+	downstream
3	LOC_Os04g37650	xyloglucan fucosyltransferase, putative, expressed	gene	xyloglucan fucosyltransferase, putative, expressed	chr4	22200241	22202590	-	downstream
3	LOC_Os01g67300	expressed protein	gene	expressed protein	chr1	39062454	39064488	+	downstream
3	LOC_Os10g04660	hypothetical protein	gene	hypothetical protein	chr10	2219746	2223844	+	downstream
3	LOC_Os04g34190	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr4	20546383	20550749	-	downstream
3	LOC_Os02g31922	hypothetical protein	gene	hypothetical protein	chr2	18854478	18855119	+	downstream
3	LOC_Os07g46530	hypothetical protein	gene	hypothetical protein	chr7	27789670	27789984	+	downstream
3	LOC_Os03g34290	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr3	19515013	19516153	-	downstream
3	LOC_Os08g34890	OsFBDUF46 - F-box and DUF domain containing protein	gene	OsFBDUF46 - F-box and DUF domain containing protein	chr8	21964700	21967055	+	downstream
3	LOC_Os03g17850	glycosyltransferase family 43 protein, putative, expressed	gene	glycosyltransferase family 43 protein, putative, expressed	chr3	9945317	9951362	+	downstream
3	LOC_Os02g57020	YCF37, putative, expressed	gene	YCF37, putative, expressed	chr2	34919502	34920403	+	downstream
3	LOC_Os06g07923	expressed protein	gene	expressed protein	chr6	3851140	3853473	+	downstream
3	LOC_Os01g43670	hypothetical protein	gene	hypothetical protein	chr1	25025743	25027031	+	downstream
3	LOC_Os06g49100	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr6	29753547	29755481	+	downstream
3	LOC_Os07g44390	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr7	26520942	26525166	-	downstream
3	LOC_Os05g51100	OsFBX179 - F-box domain containing protein	gene	OsFBX179 - F-box domain containing protein	chr5	29253954	29254442	+	downstream
3	LOC_Os01g64680	bolA, putative, expressed	gene	bolA, putative, expressed	chr1	37525091	37525603	-	downstream
3	LOC_Os03g58100	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr3	33071664	33073693	+	downstream
3	LOC_Os03g56784	hypothetical protein	gene	hypothetical protein	chr3	32352256	32352644	+	downstream
3	LOC_Os09g38490	hypothetical protein	gene	hypothetical protein	chr9	22149258	22151335	+	downstream
3	LOC_Os02g06690	plastocyanin-like domain containing protein, putative, expressed	gene	plastocyanin-like domain containing protein, putative, expressed	chr2	3356968	3358280	+	downstream
3	LOC_Os09g02250	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr9	905618	908933	+	downstream
3	LOC_Os03g19010	peroxisomal biogenesis factor 11, putative, expressed	gene	peroxisomal biogenesis factor 11, putative, expressed	chr3	10646575	10647785	+	downstream
3	LOC_Os02g08180	protein transport protein SEC61 subunit gamma, putative, expressed	gene	protein transport protein SEC61 subunit gamma, putative, expressed	chr2	4332269	4332778	+	downstream
3	LOC_Os07g05640	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr7	2685438	2688918	+	downstream
3	LOC_Os12g29750	protein of unknown function DUF502 domain containing protein, expressed	gene	protein of unknown function DUF502 domain containing protein, expressed	chr12	17757459	17759947	+	downstream
3	LOC_Os06g50970	hypothetical protein	gene	hypothetical protein	chr6	30847413	30849266	+	downstream
3	LOC_Os01g64340	hypothetical protein	gene	hypothetical protein	chr1	37351220	37351624	+	downstream
3	LOC_Os01g07680	hypothetical protein	gene	hypothetical protein	chr1	3693855	3694301	-	downstream
3	LOC_Os01g48900	dynamin-related protein 1A, putative	gene	dynamin-related protein 1A, putative	chr1	28053894	28059551	+	downstream
3	LOC_Os11g34830	ABC1 family domain containing protein, putative	gene	ABC1 family domain containing protein, putative	chr11	19941733	19948805	+	downstream
3	LOC_Os01g27640	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr1	15412089	15414765	+	downstream
3	LOC_Os03g18170	STE_MEKK_ste11_MAP3K.13 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	gene	STE_MEKK_ste11_MAP3K.13 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	chr3	10183498	10186390	+	downstream
3	LOC_Os04g37460	glutamate decarboxylase, putative, expressed	gene	glutamate decarboxylase, putative, expressed	chr4	22128953	22131315	-	downstream
3	LOC_Os01g55670	expressed protein	gene	expressed protein	chr1	32069741	32071039	-	downstream
3	LOC_Os02g57965	F-box domain containing protein, expressed	gene	F-box domain containing protein, expressed	chr2	35495171	35495909	-	downstream
3	LOC_Os02g14910	bZIP transcription factor family protein, putative, expressed	gene	bZIP transcription factor family protein, putative, expressed	chr2	8323890	8325790	+	downstream
3	LOC_Os06g04440	hypothetical protein	gene	hypothetical protein	chr6	1898595	1899626	+	downstream
3	LOC_Os02g45230	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	27472171	27472536	-	downstream
3	LOC_Os01g67280	hypothetical protein	gene	hypothetical protein	chr1	39048797	39050487	-	downstream
3	LOC_Os12g43580	expressed protein	gene	expressed protein	chr12	27012593	27016344	+	downstream
3	LOC_Os06g38770	expressed protein	gene	expressed protein	chr6	23015239	23016255	-	downstream
3	LOC_Os03g03980	coiled-coil domain-containing protein 124, putative, expressed	gene	coiled-coil domain-containing protein 124, putative, expressed	chr3	1814435	1815486	+	downstream
3	LOC_Os11g42490	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr11	25123729	25125565	+	downstream
3	LOC_Os10g41860	expressed protein	gene	expressed protein	chr10	22450497	22453336	-	downstream
3	LOC_Os12g31650	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr12	19035369	19038769	-	downstream
3	LOC_Os12g03960	dehydrogenase-phosphopantetheinyltransferase, putative, expressed	gene	dehydrogenase-phosphopantetheinyltransferase, putative, expressed	chr12	1645375	1647104	+	downstream
3	LOC_Os11g41870	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr11	24708854	24710661	-	downstream
3	LOC_Os02g47140	L11 domain containing ribosomal protein, putative, expressed	gene	L11 domain containing ribosomal protein, putative, expressed	chr2	28767044	28768371	+	downstream
3	LOC_Os08g19970	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr8	11948022	11955143	+	downstream
3	LOC_Os06g45790	expressed protein	gene	expressed protein	chr6	27706137	27706593	-	downstream
3	LOC_Os04g50880	phosphoribulokinase/Uridine kinase family protein, expressed	gene	phosphoribulokinase/Uridine kinase family protein, expressed	chr4	29922079	29923760	-	downstream
3	LOC_Os07g43500	hypothetical protein	gene	hypothetical protein	chr7	26032191	26034247	-	downstream
3	LOC_Os01g63410	expressed protein	gene	expressed protein	chr1	36734908	36736358	-	downstream
3	LOC_Os08g33910	no apical meristem protein, putative, expressed	gene	no apical meristem protein, putative, expressed	chr8	21215512	21217536	+	downstream
3	LOC_Os05g14310	expressed protein	gene	expressed protein	chr5	8046730	8047531	+	downstream
3	LOC_Os01g54890	ethylene-responsive transcription factor 2, putative, expressed	gene	ethylene-responsive transcription factor 2, putative, expressed	chr1	31566847	31567697	+	downstream
3	LOC_Os02g15810	HMG1/2, putative, expressed	gene	HMG1/2, putative, expressed	chr2	8935090	8937179	-	downstream
3	LOC_Os02g44599	expressed protein	gene	expressed protein	chr2	27017055	27022549	-	downstream
3	LOC_Os08g39590	inactive receptor kinase At2g26730 precursor, putative, expressed	gene	inactive receptor kinase At2g26730 precursor, putative, expressed	chr8	25058026	25060689	+	downstream
3	LOC_Os01g16200	serpin domain containing protein, putative	gene	serpin domain containing protein, putative	chr1	9170628	9171899	+	downstream
3	LOC_Os11g01820	ATCHX, putative, expressed	gene	ATCHX, putative, expressed	chr11	434165	437187	+	downstream
3	LOC_Os03g08110	hydrolase protein, putative, expressed	gene	hydrolase protein, putative, expressed	chr3	4135962	4141717	-	downstream
3	LOC_Os11g44900	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr11	26703468	26706319	+	downstream
3	LOC_Os01g07300	uncharacterized 50.6 kDa protein in the 5region of gyrA and gyrB, putative, expressed	gene	uncharacterized 50.6 kDa protein in the 5region of gyrA and gyrB, putative, expressed	chr1	3444159	3445607	+	downstream
3	LOC_Os12g31400	hypothetical protein	gene	hypothetical protein	chr12	18863067	18863711	+	downstream
3	LOC_Os08g19210	expressed protein	gene	expressed protein	chr8	11486292	11490404	+	downstream
3	LOC_Os11g48010	hypothetical protein	gene	hypothetical protein	chr11	28429788	28430060	-	downstream
3	LOC_Os01g48290	dof zinc finger domain containing protein, putative, expressed	gene	dof zinc finger domain containing protein, putative, expressed	chr1	27675457	27675984	+	downstream
3	LOC_Os09g37560	conserved hypothetical protein	gene	conserved hypothetical protein	chr9	21651440	21652048	+	downstream
3	LOC_Os02g47350	oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed	gene	oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed	chr2	28908875	28911021	+	downstream
3	LOC_Os01g53240	BURP domain containing protein, expressed	gene	BURP domain containing protein, expressed	chr1	30588815	30591616	+	downstream
3	LOC_Os02g44360	scarecrow transcription factor family protein, putative, expressed	gene	scarecrow transcription factor family protein, putative, expressed	chr2	26835716	26838462	+	downstream
3	LOC_Os08g43630	expressed protein	gene	expressed protein	chr8	27583385	27584039	+	downstream
3	LOC_Os04g41360	hypothetical protein	gene	hypothetical protein	chr4	24351363	24352125	-	downstream
3	LOC_Os03g50260	expressed protein	gene	expressed protein	chr3	28642829	28643394	-	downstream
3	LOC_Os08g06450	cytidylyltransferase domain containing protein, expressed	gene	cytidylyltransferase domain containing protein, expressed	chr8	3618445	3620583	-	downstream
3	LOC_Os01g57854	pectinesterase, putative, expressed	gene	pectinesterase, putative, expressed	chr1	33452389	33459043	+	downstream
3	LOC_Os10g01274	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr10	174066	183565	+	downstream
3	LOC_Os02g24740	OsSAUR9 - Auxin-responsive SAUR gene family member, expressed	gene	OsSAUR9 - Auxin-responsive SAUR gene family member, expressed	chr2	14349693	14350300	+	downstream
3	LOC_Os03g15790	ZOS3-08 - C2H2 zinc finger protein, expressed	gene	ZOS3-08 - C2H2 zinc finger protein, expressed	chr3	8711570	8713589	-	downstream
3	LOC_Os12g43820	GCRP5 - Glycine and cysteine rich family protein precursor, expressed	gene	GCRP5 - Glycine and cysteine rich family protein precursor, expressed	chr12	27175657	27176105	+	downstream
3	LOC_Os01g10830	carnitine racemase like protein, putative, expressed	gene	carnitine racemase like protein, putative, expressed	chr1	5772300	5773192	+	downstream
3	LOC_Os12g40140	OsFBX457 - F-box domain containing protein, expressed	gene	OsFBX457 - F-box domain containing protein, expressed	chr12	24789724	24790967	+	downstream
3	LOC_Os01g42000	skin secretory protein xP2 precursor, putative, expressed	gene	skin secretory protein xP2 precursor, putative, expressed	chr1	23811665	23813668	+	downstream
3	LOC_Os12g11680	verticillium wilt disease resistance protein precursor, putative, expressed	gene	verticillium wilt disease resistance protein precursor, putative, expressed	chr12	6339698	6342979	+	downstream
3	LOC_Os03g58610	expressed protein	gene	expressed protein	chr3	33377823	33380109	-	downstream
3	LOC_Os03g10110	cupin domain containing protein, expressed	gene	cupin domain containing protein, expressed	chr3	5115237	5118704	+	downstream
3	LOC_Os03g55300	expressed protein	gene	expressed protein	chr3	31461568	31462512	+	downstream
3	LOC_Os02g51340	hypothetical protein	gene	hypothetical protein	chr2	31437069	31437326	+	downstream
3	LOC_Os08g02939	expressed protein	gene	expressed protein	chr8	1279188	1279794	-	downstream
3	LOC_Os06g37170	hypothetical protein	gene	hypothetical protein	chr6	21960364	21960660	+	downstream
3	LOC_Os11g47690	zinc finger, C3HC4 type domain containing protein	gene	zinc finger, C3HC4 type domain containing protein	chr11	28260929	28261441	+	downstream
3	LOC_Os09g32520	60S ribosomal protein L32, putative, expressed	gene	60S ribosomal protein L32, putative, expressed	chr9	19412752	19414393	-	downstream
3	LOC_Os11g05360	RCLEA9 - Root cap and Late embryogenesis related family protein precursor, putative	gene	RCLEA9 - Root cap and Late embryogenesis related family protein precursor, putative	chr11	2374998	2376272	+	downstream
3	LOC_Os01g66620	glucosyltransferase, putative	gene	glucosyltransferase, putative	chr1	38694688	38695092	-	downstream
3	LOC_Os10g07380	hypothetical protein	gene	hypothetical protein	chr10	3890889	3895629	-	downstream
3	LOC_Os01g49614	Protein kinase domain containing protein, expressed	gene	Protein kinase domain containing protein, expressed	chr1	28522961	28533563	+	downstream
3	LOC_Os01g31210	hypothetical protein	gene	hypothetical protein	chr1	17064034	17064489	+	downstream
3	LOC_Os10g26270	no apical meristem protein	gene	no apical meristem protein	chr10	13526754	13528733	+	downstream
3	LOC_Os01g57430	hypothetical protein	gene	hypothetical protein	chr1	33193040	33193358	+	downstream
3	LOC_Os03g10440	glycosyl hydrolase family 10 protein, putative, expressed	gene	glycosyl hydrolase family 10 protein, putative, expressed	chr3	5316215	5320081	+	downstream
3	LOC_Os02g52800	OsMan03 - Endo-Beta-Mannanase, expressed	gene	OsMan03 - Endo-Beta-Mannanase, expressed	chr2	32278116	32279746	-	downstream
3	LOC_Os01g36064	hAT dimerisation domain-containing protein, putative, expressed	gene	hAT dimerisation domain-containing protein, putative, expressed	chr1	19955727	19958420	+	downstream
3	LOC_Os09g10900	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr9	5985513	5988914	+	downstream
3	LOC_Os03g52390	PIII1 - Proteinase inhibitor II family protein precursor, expressed	gene	PIII1 - Proteinase inhibitor II family protein precursor, expressed	chr3	30071363	30071968	+	downstream
3	LOC_Os05g47920	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr5	27404945	27410807	-	downstream
3	LOC_Os03g63910	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr3	36100177	36103868	+	downstream
3	LOC_Os12g02814	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr12	1000944	1003134	-	downstream
3	LOC_Os06g02530	expressed protein	gene	expressed protein	chr6	874373	875368	-	downstream
3	LOC_Os04g02354	expressed protein	gene	expressed protein	chr4	834447	836343	+	downstream
3	LOC_Os10g22680	conserved hypothetical protein	gene	conserved hypothetical protein	chr10	11711328	11712114	+	downstream
3	LOC_Os10g31780	oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed	gene	oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed	chr10	16592705	16593490	+	downstream
3	LOC_Os08g32970	annexin, putative, expressed	gene	annexin, putative, expressed	chr8	20456985	20458908	+	downstream
3	LOC_Os06g05790	transferase family domain containing protein, expressed	gene	transferase family domain containing protein, expressed	chr6	2630870	2634263	-	downstream
3	LOC_Os03g18490	RPGR, putative, expressed	gene	RPGR, putative, expressed	chr3	10365915	10367006	+	downstream
3	LOC_Os09g31474	hypothetical protein	gene	hypothetical protein	chr9	18975630	18976825	+	downstream
3	LOC_Os02g28460	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	16824375	16825339	-	downstream
3	LOC_Os04g49980	late embryogenesis abundant group 1, putative, expressed	gene	late embryogenesis abundant group 1, putative, expressed	chr4	29626825	29627599	+	downstream
3	LOC_Os01g25360	esterase, putative	gene	esterase, putative	chr1	14325160	14326021	+	downstream
3	LOC_Os03g62410	phospholipase D, putative, expressed	gene	phospholipase D, putative, expressed	chr3	35343065	35347766	-	downstream
3	LOC_Os06g19200	hypothetical protein	gene	hypothetical protein	chr6	10925619	10926029	+	downstream
3	LOC_Os02g47190	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr2	28803051	28806107	+	downstream
3	LOC_Os03g55440	hypothetical protein	gene	hypothetical protein	chr3	31532351	31534012	-	downstream
3	LOC_Os07g13880	soluble starch synthase 2-3, chloroplast precursor, putative	gene	soluble starch synthase 2-3, chloroplast precursor, putative	chr7	7940585	7941429	-	downstream
3	LOC_Os10g42390	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr10	22746551	22747144	+	downstream
3	LOC_Os12g01350	csAtPR5, putative, expressed	gene	csAtPR5, putative, expressed	chr12	203476	206191	+	downstream
3	LOC_Os02g04000	OsFBX37 - F-box domain containing protein	gene	OsFBX37 - F-box domain containing protein	chr2	1731654	1732793	+	downstream
3	LOC_Os01g43140	lipase, putative, expressed	gene	lipase, putative, expressed	chr1	24610645	24614442	+	downstream
3	LOC_Os12g42830	conserved hypothetical protein	gene	conserved hypothetical protein	chr12	26580135	26583625	+	downstream
3	LOC_Os12g30500	DUF593 domain containing protein, expressed	gene	DUF593 domain containing protein, expressed	chr12	18279643	18281922	+	downstream
3	LOC_Os04g55280	conserved hypothetical protein	gene	conserved hypothetical protein	chr4	32679837	32682213	-	downstream
3	LOC_Os10g30960	conserved hypothetical protein	gene	conserved hypothetical protein	chr10	16088509	16088916	+	downstream
3	LOC_Os01g53750	glucan endo-1,3-beta-glucosidase precursor, putative, expressed	gene	glucan endo-1,3-beta-glucosidase precursor, putative, expressed	chr1	30896929	30899576	+	downstream
3	LOC_Os06g46690	exostosin family protein, putative, expressed	gene	exostosin family protein, putative, expressed	chr6	28362633	28367050	-	downstream
3	LOC_Os02g04410	hypothetical protein	gene	hypothetical protein	chr2	1944550	1945719	-	downstream
3	LOC_Os06g41030	DUF1680 domain containing protein, putative, expressed	gene	DUF1680 domain containing protein, putative, expressed	chr6	24501393	24506550	-	downstream
3	LOC_Os10g32810	beta-amylase, putative, expressed	gene	beta-amylase, putative, expressed	chr10	17109530	17112238	+	downstream
3	LOC_Os05g48610	expressed protein	gene	expressed protein	chr5	27805075	27805680	+	downstream
3	LOC_Os06g29590	hypothetical protein	gene	hypothetical protein	chr6	16959719	16960855	-	downstream
3	LOC_Os11g33080	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr11	19097787	19105336	+	downstream
3	LOC_Os02g14780	splicing factor 3 subunit 1, putative, expressed	gene	splicing factor 3 subunit 1, putative, expressed	chr2	8196894	8200387	+	downstream
3	LOC_Os06g13800	conserved hypothetical protein	gene	conserved hypothetical protein	chr6	7646853	7647415	-	downstream
3	LOC_Os01g29680	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr1	16629003	16631774	-	downstream
3	LOC_Os05g49610	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	gene	ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	chr5	28401455	28403378	+	downstream
3	LOC_Os12g01250	csAtPR5, putative	gene	csAtPR5, putative	chr12	147185	152390	+	downstream
3	LOC_Os09g34980	zinc knuckle family protein	gene	zinc knuckle family protein	chr9	20377141	20378364	+	downstream
3	LOC_Os02g47790	monodehydroascorbate reductase, putative, expressed	gene	monodehydroascorbate reductase, putative, expressed	chr2	29220759	29223212	-	downstream
3	LOC_Os12g03130	CDC45A - Putative DNA replication initiation protein, expressed	gene	CDC45A - Putative DNA replication initiation protein, expressed	chr12	1188043	1190517	+	downstream
3	LOC_Os01g47670	expressed protein	gene	expressed protein	chr1	27268123	27269331	-	downstream
3	LOC_Os09g32080	CHIT13 - Chitinase family protein precursor, expressed	gene	CHIT13 - Chitinase family protein precursor, expressed	chr9	19147628	19149636	+	downstream
3	LOC_Os06g14270	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr6	7959790	7960936	-	downstream
3	LOC_Os06g48510	choline monooxygenase, chloroplast precursor, putative, expressed	gene	choline monooxygenase, chloroplast precursor, putative, expressed	chr6	29346849	29351148	+	downstream
3	LOC_Os01g05000	hypothetical protein	gene	hypothetical protein	chr1	2355183	2356045	+	downstream
3	LOC_Os09g26380	aminotransferase, classes I and II, domain containing protein, expressed	gene	aminotransferase, classes I and II, domain containing protein, expressed	chr9	15929509	15935556	+	downstream
3	LOC_Os10g32670	expressed protein	gene	expressed protein	chr10	17036357	17037222	-	downstream
3	LOC_Os01g16146	phenazine biosynthesis protein, putative, expressed	gene	phenazine biosynthesis protein, putative, expressed	chr1	9113577	9116425	-	downstream
3	LOC_Os07g39830	expressed protein	gene	expressed protein	chr7	23883630	23886183	+	downstream
3	LOC_Os12g13330	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr12	7434390	7436724	+	downstream
3	LOC_Os02g12120	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr2	6299213	6310619	-	downstream
3	LOC_Os12g42950	hypothetical protein	gene	hypothetical protein	chr12	26651130	26652215	+	downstream
3	LOC_Os05g38560	Core histone H2A/H2B/H3/H4 domain containing protein, putative	gene	Core histone H2A/H2B/H3/H4 domain containing protein, putative	chr5	22562558	22563058	+	downstream
3	LOC_Os05g24920	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr5	14369421	14370398	+	downstream
3	LOC_Os05g30940	vacuolar calcium binding protein, putative, expressed	gene	vacuolar calcium binding protein, putative, expressed	chr5	17901520	17903838	-	downstream
3	LOC_Os10g36340	expressed protein	gene	expressed protein	chr10	19341824	19342927	+	downstream
3	LOC_Os07g10590	transporter family protein, putative, expressed	gene	transporter family protein, putative, expressed	chr7	5746395	5748827	-	downstream
3	LOC_Os09g39190	OsFBO22 - F-box and other domain containing protein, expressed	gene	OsFBO22 - F-box and other domain containing protein, expressed	chr9	22507403	22512808	-	downstream
3	LOC_Os01g58754	expressed protein	gene	expressed protein	chr1	33959270	33960017	+	downstream
3	LOC_Os08g13880	hypothetical protein	gene	hypothetical protein	chr8	8289274	8290217	+	downstream
3	LOC_Os11g39360	pentatricopeptide repeat domain containing protein, putative, expressed	gene	pentatricopeptide repeat domain containing protein, putative, expressed	chr11	22961131	22963796	+	downstream
3	LOC_Os07g10254	expressed protein	gene	expressed protein	chr7	5506024	5506724	+	downstream
3	LOC_Os12g37410	CPuORF5 - conserved peptide uORF-containing transcript, expressed	gene	CPuORF5 - conserved peptide uORF-containing transcript, expressed	chr12	22933824	22935119	+	downstream
3	LOC_Os02g31924	hypothetical protein	gene	hypothetical protein	chr2	18855536	18856136	+	downstream
3	LOC_Os02g49510	amino acid transporter, putative, expressed	gene	amino acid transporter, putative, expressed	chr2	30253564	30257638	-	downstream
3	LOC_Os02g01590	glycosyl hydrolases, putative, expressed	gene	glycosyl hydrolases, putative, expressed	chr2	343057	347196	+	downstream
3	LOC_Os06g46920	dihydroflavonol-4-reductase, putative, expressed	gene	dihydroflavonol-4-reductase, putative, expressed	chr6	28469176	28471155	-	downstream
3	LOC_Os05g19620	expressed protein	gene	expressed protein	chr5	11431328	11435356	+	downstream
3	LOC_Os03g39100	no apical meristem protein	gene	no apical meristem protein	chr3	21724668	21726170	+	downstream
3	LOC_Os08g26370	hypothetical protein	gene	hypothetical protein	chr8	16070328	16070988	+	downstream
3	LOC_Os02g08340	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr2	4427704	4431194	+	downstream
3	LOC_Os08g36450	transcription regulator, putative, expressed	gene	transcription regulator, putative, expressed	chr8	22998734	23000425	+	downstream
3	LOC_Os03g61720	glycerol-3-phosphate acyltransferase, putative, expressed	gene	glycerol-3-phosphate acyltransferase, putative, expressed	chr3	34978066	34983629	+	downstream
3	LOC_Os10g42750	CSLD1 - cellulose synthase-like family D, expressed	gene	CSLD1 - cellulose synthase-like family D, expressed	chr10	22990927	22994765	+	downstream
3	LOC_Os02g10420	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	5477110	5478166	-	downstream
3	LOC_Os01g12360	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr1	6750357	6756512	-	downstream
3	LOC_Os02g40739	unknown	gene	unknown	chr2	24688772	24688971	+	downstream
3	LOC_Os02g39360	B-box zinc finger family protein, putative, expressed	gene	B-box zinc finger family protein, putative, expressed	chr2	23753345	23754688	+	downstream
3	LOC_Os02g51870	hypothetical protein	gene	hypothetical protein	chr2	31764824	31765393	+	downstream
3	LOC_Os09g20810	strictosidine synthase, putative	gene	strictosidine synthase, putative	chr9	12535620	12538846	+	downstream
3	LOC_Os05g17840	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr5	10261357	10266162	+	downstream
3	LOC_Os04g21880	conserved hypothetical protein	gene	conserved hypothetical protein	chr4	12383412	12385591	+	downstream
3	LOC_Os03g54910	X8 domain containing protein, expressed	gene	X8 domain containing protein, expressed	chr3	31209286	31211707	-	downstream
3	LOC_Os01g71256	expressed protein	gene	expressed protein	chr1	41229811	41234617	-	downstream
3	LOC_Os07g31530	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr7	18712940	18715920	-	downstream
3	LOC_Os04g30920	expressed protein	gene	expressed protein	chr4	18304445	18305299	-	downstream
3	LOC_Os04g46000	cyclin, putative, expressed	gene	cyclin, putative, expressed	chr4	27066679	27069068	-	downstream
3	LOC_Os06g19180	hypothetical protein	gene	hypothetical protein	chr6	10918641	10920058	+	downstream
3	LOC_Os07g10710	OsFBX223 - F-box domain containing protein	gene	OsFBX223 - F-box domain containing protein	chr7	5816315	5817526	+	downstream
3	LOC_Os04g35860	T-complex protein 11, putative, expressed	gene	T-complex protein 11, putative, expressed	chr4	21681532	21684366	+	downstream
3	LOC_Os06g13940	expressed protein	gene	expressed protein	chr6	7762144	7762950	-	downstream
3	LOC_Os05g30240	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr5	17462358	17466127	+	downstream
3	LOC_Os01g22380	expressed protein	gene	expressed protein	chr1	12581709	12582436	-	downstream
3	LOC_Os02g31090	collagen-binding protein, putative	gene	collagen-binding protein, putative	chr2	18584406	18585032	+	downstream
3	LOC_Os03g62020	harpin-induced protein 1 domain containing protein, expressed	gene	harpin-induced protein 1 domain containing protein, expressed	chr3	35138503	35139559	+	downstream
3	LOC_Os10g12750	expressed protein	gene	expressed protein	chr10	7130387	7131795	-	downstream
3	LOC_Os03g48150	expressed protein	gene	expressed protein	chr3	27388093	27390795	-	downstream
3	LOC_Os08g43570	beta-galactosidase precursor, putative, expressed	gene	beta-galactosidase precursor, putative, expressed	chr8	27557913	27562507	+	downstream
3	LOC_Os06g04550	hypothetical protein	gene	hypothetical protein	chr6	1967626	1970807	+	downstream
3	LOC_Os08g33460	expressed protein	gene	expressed protein	chr8	20870839	20871681	+	downstream
3	LOC_Os03g46250	acetyltransferase, GNAT family, putative, expressed	gene	acetyltransferase, GNAT family, putative, expressed	chr3	26145618	26146908	+	downstream
3	LOC_Os01g57710	membrane protein, putative, expressed	gene	membrane protein, putative, expressed	chr1	33363195	33366335	-	downstream
3	LOC_Os08g09340	bromodomain containing protein, expressed	gene	bromodomain containing protein, expressed	chr8	5417275	5419393	+	downstream
3	LOC_Os01g61180	exo70 exocyst complex subunit domain containing protein, expressed	gene	exo70 exocyst complex subunit domain containing protein, expressed	chr1	35408247	35410704	+	downstream
3	LOC_Os07g37120	retrotransposon protein, putative, LINE subclass	gene	retrotransposon protein, putative, LINE subclass	chr7	22240726	22242539	-	downstream
3	LOC_Os01g73640	expressed protein	gene	expressed protein	chr1	42655377	42661528	+	downstream
3	LOC_Os02g44880	expressed protein	gene	expressed protein	chr2	27177053	27180836	+	downstream
3	LOC_Os02g48360	pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed	gene	pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed	chr2	29598580	29604374	-	downstream
3	LOC_Os05g37210	eukaryotic protein of unknown function DUF914 domain containing protein	gene	eukaryotic protein of unknown function DUF914 domain containing protein	chr5	21695786	21697099	+	downstream
3	LOC_Os04g25980	cytokinin-O-glucosyltransferase 2, putative, expressed	gene	cytokinin-O-glucosyltransferase 2, putative, expressed	chr4	15111094	15112643	-	downstream
3	LOC_Os08g02030	transferase family protein, putative, expressed	gene	transferase family protein, putative, expressed	chr8	654748	656391	-	downstream
3	LOC_Os05g28150	lipase, putative	gene	lipase, putative	chr5	16408612	16409405	-	downstream
3	LOC_Os02g13620	expressed protein	gene	expressed protein	chr2	7310420	7310992	+	downstream
3	LOC_Os01g08990	conserved hypothetical protein	gene	conserved hypothetical protein	chr1	4508225	4512098	+	downstream
3	LOC_Os05g18774	protein phosphatase 1 regulatory subunit 11, putative, expressed	gene	protein phosphatase 1 regulatory subunit 11, putative, expressed	chr5	10899622	10900864	+	downstream
3	LOC_Os06g13670	E2F family transcription factor protein, putative, expressed	gene	E2F family transcription factor protein, putative, expressed	chr6	7583781	7589606	+	downstream
3	LOC_Os02g43100	hypothetical protein	gene	hypothetical protein	chr2	25949533	25950487	+	downstream
3	LOC_Os06g31090	GAMYB-binding protein, putative, expressed	gene	GAMYB-binding protein, putative, expressed	chr6	18078010	18078822	-	downstream
3	LOC_Os04g55120	jp18, putative, expressed	gene	jp18, putative, expressed	chr4	32588285	32589185	+	downstream
3	LOC_Os01g42870	transferase family protein, putative, expressed	gene	transferase family protein, putative, expressed	chr1	24394013	24395776	-	downstream
3	LOC_Os08g34470	hypothetical protein	gene	hypothetical protein	chr8	21628249	21629195	-	downstream
3	LOC_Os09g07010	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr9	3398181	3402109	-	downstream
3	LOC_Os03g55550	helix-loop-helix DNA-binding domain containing protein	gene	helix-loop-helix DNA-binding domain containing protein	chr3	31601452	31604383	+	downstream
3	LOC_Os04g33410	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr4	20061475	20063652	+	downstream
3	LOC_Os04g54430	immediate-early protein RSP40, putative, expressed	gene	immediate-early protein RSP40, putative, expressed	chr4	32198788	32202050	-	downstream
3	LOC_Os02g52305	expressed protein	gene	expressed protein	chr2	32015867	32016939	+	downstream
3	LOC_Os02g47830	expressed protein	gene	expressed protein	chr2	29253460	29254803	+	downstream
3	LOC_Os05g43576	radical SAM enzyme, putative, expressed	gene	radical SAM enzyme, putative, expressed	chr5	25281221	25283682	+	downstream
3	LOC_Os12g43090	expressed protein	gene	expressed protein	chr12	26723888	26725585	+	downstream
3	LOC_Os04g38320	expressed protein	gene	expressed protein	chr4	22615458	22616324	-	downstream
3	LOC_Os09g28900	basic helix-loop-helix, putative	gene	basic helix-loop-helix, putative	chr9	17564470	17565196	+	downstream
3	LOC_Os01g10000	hypothetical protein	gene	hypothetical protein	chr1	5209468	5212292	-	downstream
3	LOC_Os06g47700	serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed	gene	serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed	chr6	28866477	28870008	-	downstream
3	LOC_Os06g28330	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr6	16093763	16098127	+	downstream
3	LOC_Os01g55420	expressed protein	gene	expressed protein	chr1	31924822	31926007	+	downstream
3	LOC_Os02g56930	expressed protein	gene	expressed protein	chr2	34894536	34895511	+	downstream
3	LOC_Os03g59460	transcription factor, putative	gene	transcription factor, putative	chr3	33835705	33838079	+	downstream
3	LOC_Os11g04940	phospholipase, putative	gene	phospholipase, putative	chr11	2106545	2107762	+	downstream
3	LOC_Os05g48780	expressed protein	gene	expressed protein	chr5	27893252	27893893	+	downstream
3	LOC_Os08g37060	gibberellin receptor GID1L2, putative, expressed	gene	gibberellin receptor GID1L2, putative, expressed	chr8	23415980	23417497	+	downstream
3	LOC_Os05g06250	conserved hypothetical protein	gene	conserved hypothetical protein	chr5	3178852	3180918	+	downstream
3	LOC_Os10g39000	expressed protein	gene	expressed protein	chr10	20714916	20716321	-	downstream
3	LOC_Os05g31914	hypothetical protein	gene	hypothetical protein	chr5	18522123	18523847	-	downstream
3	LOC_Os05g49870	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr5	28551105	28553931	+	downstream
3	LOC_Os03g29460	60S ribosomal protein, putative, expressed	gene	60S ribosomal protein, putative, expressed	chr3	16786052	16786842	+	downstream
3	LOC_Os09g02060	hypothetical protein	gene	hypothetical protein	chr9	750718	752090	-	downstream
3	LOC_Os11g34970	NB-ARC domain containing protein, expressed	gene	NB-ARC domain containing protein, expressed	chr11	20030472	20034340	+	downstream
3	LOC_Os04g45560	hypothetical protein	gene	hypothetical protein	chr4	26768269	26768778	+	downstream
3	LOC_Os12g07874	WD-40 repeat family protein, putative, expressed	gene	WD-40 repeat family protein, putative, expressed	chr12	3981944	3985504	-	downstream
3	LOC_Os02g29290	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	17397604	17398845	+	downstream
3	LOC_Os04g31180	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr4	18482734	18487045	+	downstream
3	LOC_Os02g01870	expressed protein	gene	expressed protein	chr2	482342	483969	+	downstream
3	LOC_Os10g14170	hypothetical protein	gene	hypothetical protein	chr10	7700782	7701589	-	downstream
3	LOC_Os08g39030	expressed protein	gene	expressed protein	chr8	24663116	24665723	+	downstream
3	LOC_Os06g26330	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr6	15412135	15412773	+	downstream
3	LOC_Os05g39600	ATCHX15, putative, expressed	gene	ATCHX15, putative, expressed	chr5	23188556	23191836	+	downstream
3	LOC_Os07g45340	hypothetical protein	gene	hypothetical protein	chr7	27047795	27049099	+	downstream
3	LOC_Os05g42290	conserved hypothetical protein	gene	conserved hypothetical protein	chr5	24672941	24675184	+	downstream
3	LOC_Os03g63580	phosphoesterase family protein, putative, expressed	gene	phosphoesterase family protein, putative, expressed	chr3	35899624	35901269	+	downstream
3	LOC_Os02g04620	marker Xucw84, putative	gene	marker Xucw84, putative	chr2	2065874	2066200	-	downstream
3	LOC_Os03g21260	2,3-bisphosphoglycerate-independent phosphoglycerate mutase, putative	gene	2,3-bisphosphoglycerate-independent phosphoglycerate mutase, putative	chr3	12144587	12148921	+	downstream
3	LOC_Os10g29159	hypothetical protein	gene	hypothetical protein	chr10	15115521	15115763	-	downstream
3	LOC_Os02g37850	expressed protein	gene	expressed protein	chr2	22859951	22864239	+	downstream
3	LOC_Os07g39470	gibberellin response modulator protein, putative, expressed	gene	gibberellin response modulator protein, putative, expressed	chr7	23649532	23653080	+	downstream
3	LOC_Os06g13090	armadillo/beta-catenin repeat family protein, putative	gene	armadillo/beta-catenin repeat family protein, putative	chr6	7185602	7187077	+	downstream
3	LOC_Os07g32406	expressed protein	gene	expressed protein	chr7	19270764	19275192	-	downstream
3	LOC_Os11g05260	phosphoglycerate mutase, putative, expressed	gene	phosphoglycerate mutase, putative, expressed	chr11	2325817	2329126	+	downstream
3	LOC_Os02g39155	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	23646857	23647384	+	downstream
3	LOC_Os07g35710	transposon protein, putative, unclassified, expressed	gene	transposon protein, putative, unclassified, expressed	chr7	21387681	21389284	+	downstream
3	LOC_Os10g03840	hypothetical protein	gene	hypothetical protein	chr10	1739965	1741483	-	downstream
3	LOC_Os06g13760	glycosyl transferase 8 domain containing protein, putative, expressed	gene	glycosyl transferase 8 domain containing protein, putative, expressed	chr6	7628548	7630706	+	downstream
3	LOC_Os11g37880	stripe rust resistance protein Yr10, putative, expressed	gene	stripe rust resistance protein Yr10, putative, expressed	chr11	21985507	21992437	+	downstream
3	LOC_Os12g16260	hypothetical protein	gene	hypothetical protein	chr12	9295415	9297587	-	downstream
3	LOC_Os07g39110	AP2/EREBP transcription factor BABY BOOM, putative, expressed	gene	AP2/EREBP transcription factor BABY BOOM, putative, expressed	chr7	23432382	23433861	+	downstream
3	LOC_Os12g26870	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr12	15746214	15748981	-	downstream
3	LOC_Os12g04770	expressed protein	gene	expressed protein	chr12	2027537	2029787	+	downstream
3	LOC_Os03g53939	unknown	gene	unknown	chr3	30919005	30919158	-	downstream
3	LOC_Os12g23030	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr12	13014785	13018814	-	downstream
3	LOC_Os03g02590	peroxisomal biogenesis factor 11, putative, expressed	gene	peroxisomal biogenesis factor 11, putative, expressed	chr3	955804	959247	-	downstream
3	LOC_Os12g32814	pleiotropic drug resistance protein 3, putative, expressed	gene	pleiotropic drug resistance protein 3, putative, expressed	chr12	19799951	19802834	-	downstream
3	LOC_Os02g31867	expressed protein	gene	expressed protein	chr2	18818690	18820281	-	downstream
3	LOC_Os03g13030	lecithin cholesterol acyltransferase, putative, expressed	gene	lecithin cholesterol acyltransferase, putative, expressed	chr3	7042269	7045128	-	downstream
3	LOC_Os01g05260	hypothetical protein	gene	hypothetical protein	chr1	2477076	2479001	-	downstream
3	LOC_Os04g33430	hypothetical protein	gene	hypothetical protein	chr4	20054930	20055295	-	downstream
3	LOC_Os12g41420	conserved hypothetical protein	gene	conserved hypothetical protein	chr12	25629337	25629726	+	downstream
3	LOC_Os04g58540	transposon protein, putative, Mariner sub-class	gene	transposon protein, putative, Mariner sub-class	chr4	34622852	34624001	-	downstream
3	LOC_Os12g17424	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr12	9989310	9990749	-	downstream
3	LOC_Os11g12280	hypothetical protein	gene	hypothetical protein	chr11	6856025	6856918	-	downstream
3	LOC_Os04g56760	PHF5-like protein domain containing protein, expressed	gene	PHF5-like protein domain containing protein, expressed	chr4	33669289	33671446	-	downstream
3	LOC_Os05g36140	expressed protein	gene	expressed protein	chr5	21362491	21363450	-	downstream
3	LOC_Os10g41460	transcription factor like protein, putative, expressed	gene	transcription factor like protein, putative, expressed	chr10	22212841	22214394	+	downstream
3	LOC_Os03g02300	expressed protein	gene	expressed protein	chr3	792647	793327	+	downstream
3	LOC_Os07g31000	expressed protein	gene	expressed protein	chr7	18357215	18357565	+	downstream
3	LOC_Os04g52750	expressed protein	gene	expressed protein	chr4	31225403	31225891	+	downstream
3	LOC_Os10g39489	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr10	21014782	21015789	-	downstream
3	LOC_Os12g42290	hypothetical protein	gene	hypothetical protein	chr12	26264717	26265314	+	downstream
3	LOC_Os02g38210	elongation factor Tu, putative, expressed	gene	elongation factor Tu, putative, expressed	chr2	23106068	23108060	+	downstream
3	LOC_Os01g33530	hypothetical protein	gene	hypothetical protein	chr1	18454877	18457111	+	downstream
3	LOC_Os07g05180	Skp1 family, dimerisation domain containing protein	gene	Skp1 family, dimerisation domain containing protein	chr7	2310419	2310913	+	downstream
3	LOC_Os05g07750	hypothetical protein	gene	hypothetical protein	chr5	4178708	4179244	-	downstream
3	LOC_Os04g33840	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr4	20327465	20329102	+	downstream
3	LOC_Os08g41180	MBTB31 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed	gene	MBTB31 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed	chr8	26012378	26013598	-	downstream
3	LOC_Os03g53580	expressed protein	gene	expressed protein	chr3	30716206	30718502	+	downstream
3	LOC_Os08g39480	expressed protein	gene	expressed protein	chr8	24973564	24974134	+	downstream
3	LOC_Os12g08930	expressed protein	gene	expressed protein	chr12	4655460	4656011	-	downstream
3	LOC_Os04g06340	MEGL11 - Maternally expressed gene MEG family protein precursor	gene	MEGL11 - Maternally expressed gene MEG family protein precursor	chr4	3305938	3306434	-	downstream
3	LOC_Os06g12876	expressed protein	gene	expressed protein	chr6	7046259	7051773	+	downstream
3	LOC_Os03g04490	cyclin-dependent kinase inhibitor, putative, expressed	gene	cyclin-dependent kinase inhibitor, putative, expressed	chr3	2087669	2090766	+	downstream
3	LOC_Os09g39260	prephenate dehydratase domain containing protein, expressed	gene	prephenate dehydratase domain containing protein, expressed	chr9	22560739	22564786	+	downstream
3	LOC_Os12g03520	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr12	1394327	1395592	-	downstream
3	LOC_Os05g41300	hypothetical protein	gene	hypothetical protein	chr5	24127839	24130210	+	downstream
3	LOC_Os09g31031	ubiquitin family protein, putative, expressed	gene	ubiquitin family protein, putative, expressed	chr9	18668316	18670726	+	downstream
3	LOC_Os10g33850	Exo70 exocyst complex subunit family, putative	gene	Exo70 exocyst complex subunit family, putative	chr10	17894659	17896616	-	downstream
3	LOC_Os06g12930	conserved hypothetical protein	gene	conserved hypothetical protein	chr6	7075783	7077025	-	downstream
3	LOC_Os11g45880	transposon protein, putative, CACTA, En/Spm sub-class	gene	transposon protein, putative, CACTA, En/Spm sub-class	chr11	27281087	27284117	-	downstream
3	LOC_Os01g67350	cysteine protease, putative, expressed	gene	cysteine protease, putative, expressed	chr1	39097966	39100724	+	downstream
3	LOC_Os02g43865	expressed protein	gene	expressed protein	chr2	26487346	26487967	-	downstream
3	LOC_Os03g37080	cytochrome P450, putative	gene	cytochrome P450, putative	chr3	20550153	20556523	+	downstream
3	LOC_Os02g46630	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr2	28450686	28457238	+	downstream
3	LOC_Os02g55710	hypothetical protein	gene	hypothetical protein	chr2	34108581	34109060	-	downstream
3	LOC_Os08g09830	BTB and MATH domain containing protein, putative, expressed	gene	BTB and MATH domain containing protein, putative, expressed	chr8	5680463	5682112	+	downstream
3	LOC_Os12g14100	amino acid transporter, putative, expressed	gene	amino acid transporter, putative, expressed	chr12	7994789	7997773	+	downstream
3	LOC_Os08g03350	amino acid transporter, putative, expressed	gene	amino acid transporter, putative, expressed	chr8	1560756	1566030	+	downstream
3	LOC_Os08g05310	expressed protein	gene	expressed protein	chr8	2781929	2784763	+	downstream
3	LOC_Os11g42570	NBS-LRR type disease resistance protein, putative	gene	NBS-LRR type disease resistance protein, putative	chr11	25154606	25155560	+	downstream
3	LOC_Os05g15170	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr5	8613185	8614098	-	downstream
3	LOC_Os01g42610	terpene synthase, putative	gene	terpene synthase, putative	chr1	24233585	24237945	+	downstream
3	LOC_Os02g44900	expressed protein	gene	expressed protein	chr2	27198671	27201867	+	downstream
3	LOC_Os01g16250	expressed protein	gene	expressed protein	chr1	9200354	9203450	+	downstream
3	LOC_Os01g60520	WRKY DNA-binding domain containing protein	gene	WRKY DNA-binding domain containing protein	chr1	34995749	35002183	+	downstream
3	LOC_Os07g06880	gibberellin receptor GID1L2, putative, expressed	gene	gibberellin receptor GID1L2, putative, expressed	chr7	3359002	3360560	-	downstream
3	LOC_Os06g35720	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr6	20846326	20848652	+	downstream
3	LOC_Os01g64300	DUF584 domain containing protein, putative, expressed	gene	DUF584 domain containing protein, putative, expressed	chr1	37322841	37323865	+	downstream
3	LOC_Os04g54400	BTBN12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed	gene	BTBN12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed	chr4	32180573	32184850	+	downstream
3	LOC_Os08g08490	hypothetical protein	gene	hypothetical protein	chr8	4893743	4895073	-	downstream
3	LOC_Os07g12560	OsFBX224 - F-box domain containing protein	gene	OsFBX224 - F-box domain containing protein	chr7	7164541	7166730	-	downstream
3	LOC_Os12g31840	ZOS12-05 - C2H2 zinc finger protein, expressed	gene	ZOS12-05 - C2H2 zinc finger protein, expressed	chr12	19129531	19133065	+	downstream
3	LOC_Os03g01018	phosphoribosyl transferase, putative, expressed	gene	phosphoribosyl transferase, putative, expressed	chr3	18106	19491	+	downstream
3	LOC_Os03g19550	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr3	10989945	10991227	+	downstream
3	LOC_Os03g52830	FATC domain containing protein	gene	FATC domain containing protein	chr3	30286130	30288645	+	downstream
3	LOC_Os05g35960	conserved hypothetical protein	gene	conserved hypothetical protein	chr5	21249004	21249940	+	downstream
3	LOC_Os12g15450	expressed protein	gene	expressed protein	chr12	8816747	8820292	+	downstream
3	LOC_Os10g27270	conserved hypothetical protein	gene	conserved hypothetical protein	chr10	14323722	14324138	-	downstream
3	LOC_Os06g09620	expressed protein	gene	expressed protein	chr6	4891094	4894722	-	downstream
3	LOC_Os08g44310	expressed protein	gene	expressed protein	chr8	27885222	27886124	+	downstream
3	LOC_Os10g19330	hypothetical protein	gene	hypothetical protein	chr10	9788578	9789093	-	downstream
3	LOC_Os11g34640	hypothetical protein	gene	hypothetical protein	chr11	19810529	19811714	-	downstream
3	LOC_Os11g42780	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr11	25298832	25300934	+	downstream
3	LOC_Os05g25960	no apical meristem protein	gene	no apical meristem protein	chr5	15032427	15034130	+	downstream
3	LOC_Os08g40520	expressed protein	gene	expressed protein	chr8	25646170	25648928	+	downstream
3	LOC_Os08g37640	hypothetical protein	gene	hypothetical protein	chr8	23846946	23847410	-	downstream
3	LOC_Os08g33820	chlorophyll A-B binding protein, putative, expressed	gene	chlorophyll A-B binding protein, putative, expressed	chr8	21168501	21169967	-	downstream
3	LOC_Os12g26204	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr12	15272195	15279050	-	downstream
3	LOC_Os11g05150	hydroxyproline-rich glycoprotein family protein, putative	gene	hydroxyproline-rich glycoprotein family protein, putative	chr11	2260356	2261258	-	downstream
3	LOC_Os06g19630	steroid nuclear receptor, ligand-binding, putative, expressed	gene	steroid nuclear receptor, ligand-binding, putative, expressed	chr6	11199133	11203234	-	downstream
3	LOC_Os04g42690	UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed	gene	UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed	chr4	25066271	25068011	-	downstream
3	LOC_Os01g71094	basic 7S globulin 2 precursor, putative, expressed	gene	basic 7S globulin 2 precursor, putative, expressed	chr1	41144258	41145687	-	downstream
3	LOC_Os07g02900	DUF538 domain containing protein, putative	gene	DUF538 domain containing protein, putative	chr7	1084802	1085230	-	downstream
3	LOC_Os10g28230	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	gene	Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	chr10	14606835	14608209	+	downstream
3	LOC_Os06g12570	hypothetical protein	gene	hypothetical protein	chr6	6813709	6814191	+	downstream
3	LOC_Os02g56470	hypothetical protein	gene	hypothetical protein	chr2	34565267	34567029	+	downstream
3	LOC_Os05g43120	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr5	24973334	24976369	-	downstream
3	LOC_Os01g21144	expressed protein	gene	expressed protein	chr1	11799213	11802789	-	downstream
3	LOC_Os02g07230	porphobilinogen deaminase, chloroplast precursor, putative, expressed	gene	porphobilinogen deaminase, chloroplast precursor, putative, expressed	chr2	3715272	3718264	+	downstream
3	LOC_Os02g52440	hypothetical protein	gene	hypothetical protein	chr2	32085646	32086086	+	downstream
3	LOC_Os08g43280	hypothetical protein	gene	hypothetical protein	chr8	27357383	27360608	+	downstream
3	LOC_Os01g52460	regulator of ribonuclease, putative, expressed	gene	regulator of ribonuclease, putative, expressed	chr1	30134718	30136701	+	downstream
3	LOC_Os03g07220	PPR repeat domain containing protein, putative	gene	PPR repeat domain containing protein, putative	chr3	3689001	3693433	+	downstream
3	LOC_Os06g43240	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr6	25987882	25989057	+	downstream
3	LOC_Os04g34320	S-domain receptor-like protein kinase, putative	gene	S-domain receptor-like protein kinase, putative	chr4	20613391	20615696	+	downstream
3	LOC_Os03g25450	h/ACA ribonucleoprotein complex subunit 4, putative, expressed	gene	h/ACA ribonucleoprotein complex subunit 4, putative, expressed	chr3	14544403	14546617	+	downstream
3	LOC_Os10g25670	expressed protein	gene	expressed protein	chr10	13216645	13217358	+	downstream
3	LOC_Os12g17130	conserved hypothetical protein	gene	conserved hypothetical protein	chr12	9801770	9804723	-	downstream
3	LOC_Os11g47390	laccase precursor protein, putative, expressed	gene	laccase precursor protein, putative, expressed	chr11	27985223	27987942	-	downstream
3	LOC_Os11g01310	hypothetical protein	gene	hypothetical protein	chr11	163588	164406	+	downstream
3	LOC_Os12g07170	transposon protein, putative, Pong sub-class	gene	transposon protein, putative, Pong sub-class	chr12	3522302	3524423	+	downstream
3	LOC_Os04g46910	actin-depolymerizing factor, putative, expressed	gene	actin-depolymerizing factor, putative, expressed	chr4	27634011	27634994	-	downstream
3	LOC_Os02g30520	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr2	18153175	18156347	-	downstream
3	LOC_Os02g06470	OsFBX38 - F-box domain containing protein, expressed	gene	OsFBX38 - F-box domain containing protein, expressed	chr2	3227506	3229368	+	downstream
3	LOC_Os09g36740	tetratricopeptide repeat domain containing protein, expressed	gene	tetratricopeptide repeat domain containing protein, expressed	chr9	21197022	21199242	+	downstream
3	LOC_Os02g29400	expressed protein	gene	expressed protein	chr2	17458150	17458819	+	downstream
3	LOC_Os11g01410	ammonium transporter protein, putative	gene	ammonium transporter protein, putative	chr11	249808	250788	-	downstream
3	LOC_Os01g45360	membrane associated DUF588 domain containing protein, putative, expressed	gene	membrane associated DUF588 domain containing protein, putative, expressed	chr1	25747148	25749422	-	downstream
3	LOC_Os02g06250	phytosulfokine receptor precursor, putative, expressed	gene	phytosulfokine receptor precursor, putative, expressed	chr2	3124209	3126660	-	downstream
3	LOC_Os06g04870	homeobox associated leucine zipper, putative, expressed	gene	homeobox associated leucine zipper, putative, expressed	chr6	2136451	2138102	+	downstream
3	LOC_Os06g41980	LYK8, putative, expressed	gene	LYK8, putative, expressed	chr6	25197245	25199248	+	downstream
3	LOC_Os06g19250	conserved hypothetical protein	gene	conserved hypothetical protein	chr6	10954711	10956538	+	downstream
3	LOC_Os08g06590	hypothetical protein	gene	hypothetical protein	chr8	3719261	3720338	+	downstream
3	LOC_Os02g04220	hypothetical protein	gene	hypothetical protein	chr2	1849862	1850173	+	downstream
3	LOC_Os05g38140	basic helix-loop-helix DND-binding domain containing protein, expressed	gene	basic helix-loop-helix DND-binding domain containing protein, expressed	chr5	22308646	22311010	+	downstream
3	LOC_Os10g22050	expressed protein	gene	expressed protein	chr10	11319471	11320138	+	downstream
3	LOC_Os12g08200	expressed protein	gene	expressed protein	chr12	4187935	4188999	+	downstream
3	LOC_Os04g53000	NBS-LRR disease resistance protein, putative, expressed	gene	NBS-LRR disease resistance protein, putative, expressed	chr4	31380040	31381167	+	downstream
3	LOC_Os03g25690	conserved hypothetical protein	gene	conserved hypothetical protein	chr3	14699470	14700664	-	downstream
3	LOC_Os01g12420	receptor-like protein kinase, putative, expressed	gene	receptor-like protein kinase, putative, expressed	chr1	6786075	6788731	+	downstream
3	LOC_Os06g41700	expansin precursor, putative, expressed	gene	expansin precursor, putative, expressed	chr6	24981186	24985657	+	downstream
3	LOC_Os08g17050	hypothetical protein	gene	hypothetical protein	chr8	10441930	10442478	-	downstream
3	LOC_Os01g68050	transmembrane amino acid transporter protein, putative, expressed	gene	transmembrane amino acid transporter protein, putative, expressed	chr1	39561452	39564648	+	downstream
3	LOC_Os10g27040	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr10	14174996	14181042	-	downstream
3	LOC_Os11g03450	hypothetical protein	gene	hypothetical protein	chr11	1323620	1324078	+	downstream
3	LOC_Os11g29100	hypothetical protein	gene	hypothetical protein	chr11	16393646	16394182	+	downstream
3	LOC_Os01g34680	conserved hypothetical protein	gene	conserved hypothetical protein	chr1	19122366	19128147	-	downstream
3	LOC_Os07g37240	chlorophyll A-B binding protein, putative, expressed	gene	chlorophyll A-B binding protein, putative, expressed	chr7	22315275	22316943	-	downstream
3	LOC_Os09g39530	Cupin domain containing protein, expressed	gene	Cupin domain containing protein, expressed	chr9	22699439	22700478	-	downstream
3	LOC_Os10g04110	MLA6 protein, putative, expressed	gene	MLA6 protein, putative, expressed	chr10	1896761	1901497	+	downstream
3	LOC_Os01g64360	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr1	37357161	37358553	+	downstream
3	LOC_Os03g01530	tubulin/FtsZ domain containing protein, putative, expressed	gene	tubulin/FtsZ domain containing protein, putative, expressed	chr3	338984	340794	+	downstream
3	LOC_Os06g38330	conserved hypothetical protein	gene	conserved hypothetical protein	chr6	22708740	22709114	+	downstream
3	LOC_Os04g35580	expressed protein	gene	expressed protein	chr4	21520808	21521945	+	downstream
3	LOC_Os03g17880	expressed protein	gene	expressed protein	chr3	9959644	9960439	-	downstream
3	LOC_Os03g21010	hypothetical protein	gene	hypothetical protein	chr3	11922411	11922674	+	downstream
3	LOC_Os10g11860	MATE efflux family protein, putative, expressed	gene	MATE efflux family protein, putative, expressed	chr10	6593226	6597593	+	downstream
3	LOC_Os03g10390	expressed protein	gene	expressed protein	chr3	5293523	5296025	+	downstream
3	LOC_Os03g28389	expressed protein	gene	expressed protein	chr3	16357315	16358132	+	downstream
3	LOC_Os05g50654	mitochondrial import receptor subunit TOM7-1, putative, expressed	gene	mitochondrial import receptor subunit TOM7-1, putative, expressed	chr5	28972771	28973582	+	downstream
3	LOC_Os03g17130	bHelix-loop-helix transcription factor, putative, expressed	gene	bHelix-loop-helix transcription factor, putative, expressed	chr3	9512289	9517094	-	downstream
3	LOC_Os07g03190	PHLOEM 2-LIKE A10, putative, expressed	gene	PHLOEM 2-LIKE A10, putative, expressed	chr7	1247874	1249251	+	downstream
3	LOC_Os06g34430	zinc finger protein, putative, expressed	gene	zinc finger protein, putative, expressed	chr6	20032282	20033346	-	downstream
3	LOC_Os07g32390	targeting protein-related, putative, expressed	gene	targeting protein-related, putative, expressed	chr7	19251855	19257025	-	downstream
3	LOC_Os01g43690	hypothetical protein	gene	hypothetical protein	chr1	25037422	25039116	-	downstream
3	LOC_Os05g36900	dof zinc finger domain containing protein, putative	gene	dof zinc finger domain containing protein, putative	chr5	21492995	21493978	+	downstream
3	LOC_Os06g16250	expressed protein	gene	expressed protein	chr6	9252725	9254541	+	downstream
3	LOC_Os02g17910	CK1_CaseinKinase_1.4 - CK1 includes the casein kinase 1 kinases, expressed	gene	CK1_CaseinKinase_1.4 - CK1 includes the casein kinase 1 kinases, expressed	chr2	10371018	10377399	+	downstream
3	LOC_Os02g14510	hypothetical protein	gene	hypothetical protein	chr2	7997538	7997864	-	downstream
3	LOC_Os02g57150	tubulin-specific chaperone A, putative, expressed	gene	tubulin-specific chaperone A, putative, expressed	chr2	34996873	34998926	+	downstream
3	LOC_Os01g15770	transmembrane protein 136, putative, expressed	gene	transmembrane protein 136, putative, expressed	chr1	8882238	8884407	+	downstream
3	LOC_Os01g43760	cytochrome P450 72A1, putative, expressed	gene	cytochrome P450 72A1, putative, expressed	chr1	25069672	25071661	+	downstream
3	LOC_Os03g57750	expressed protein	gene	expressed protein	chr3	32902714	32903623	+	downstream
3	LOC_Os08g20010	hypothetical protein	gene	hypothetical protein	chr8	11982455	11982880	+	downstream
3	LOC_Os01g72934	unknown	gene	unknown	chr1	42300756	42301320	+	downstream
3	LOC_Os07g02890	OsFBX209 - F-box domain containing protein, expressed	gene	OsFBX209 - F-box domain containing protein, expressed	chr7	1081805	1083425	-	downstream
3	LOC_Os01g56530	DUF260 domain containing protein, putative, expressed	gene	DUF260 domain containing protein, putative, expressed	chr1	32591823	32592912	-	downstream
3	LOC_Os01g04590	expressed protein	gene	expressed protein	chr1	2058309	2061277	+	downstream
3	LOC_Os12g14132	hypothetical protein	gene	hypothetical protein	chr12	8020926	8022147	-	downstream
3	LOC_Os05g45570	conserved hypothetical protein	gene	conserved hypothetical protein	chr5	26345165	26350002	-	downstream
3	LOC_Os02g53030	mitogen-activated protein kinase kinase kinase 1, putative, expressed	gene	mitogen-activated protein kinase kinase kinase 1, putative, expressed	chr2	32448682	32450139	+	downstream
3	LOC_Os03g14290	expressed protein	gene	expressed protein	chr3	7781370	7783736	+	downstream
3	LOC_Os05g27500	carboxyl-terminal proteinase, putative	gene	carboxyl-terminal proteinase, putative	chr5	15937088	15940935	+	downstream
3	LOC_Os02g02040	protein kinase, putative, expressed	gene	protein kinase, putative, expressed	chr2	566043	572743	-	downstream
3	LOC_Os09g26650	2Fe-2S iron-sulfur cluster binding domain containing protein, expressed	gene	2Fe-2S iron-sulfur cluster binding domain containing protein, expressed	chr9	16170154	16174737	+	downstream
3	LOC_Os05g14360	expressed protein	gene	expressed protein	chr5	8080343	8082009	+	downstream
3	LOC_Os03g45760	expressed protein	gene	expressed protein	chr3	25844193	25847258	-	downstream
3	LOC_Os06g10130	expressed protein	gene	expressed protein	chr6	5178713	5179749	+	downstream
3	LOC_Os12g43990	expressed protein	gene	expressed protein	chr12	27260197	27261033	-	downstream
3	LOC_Os02g58220	RPA2A - Putative single-stranded DNA binding complex subunit 2, expressed	gene	RPA2A - Putative single-stranded DNA binding complex subunit 2, expressed	chr2	35633876	35636706	-	downstream
3	LOC_Os12g01150	hypothetical protein	gene	hypothetical protein	chr12	90859	91328	+	downstream
3	LOC_Os05g13770	RNA polymerase Rpb7, N-terminal domain containing protein, expressed	gene	RNA polymerase Rpb7, N-terminal domain containing protein, expressed	chr5	7630119	7633889	+	downstream
3	LOC_Os02g48950	ubiquitin-conjugating enzyme, putative	gene	ubiquitin-conjugating enzyme, putative	chr2	29925758	29928010	-	downstream
3	LOC_Os02g17240	ATROPGEF7/ROPGEF7, putative, expressed	gene	ATROPGEF7/ROPGEF7, putative, expressed	chr2	9885607	9888392	+	downstream
3	LOC_Os04g44030	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr4	25905523	25908648	+	downstream
3	LOC_Os01g66870	transposon protein, putative, CACTA, En/Spm sub-class	gene	transposon protein, putative, CACTA, En/Spm sub-class	chr1	38825440	38838958	-	downstream
3	LOC_Os04g14400	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr4	8057587	8059659	+	downstream
3	LOC_Os09g01680	DNA repair protein RAD51 homolog 4, putative, expressed	gene	DNA repair protein RAD51 homolog 4, putative, expressed	chr9	484012	489816	-	downstream
3	LOC_Os03g63290	oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed	gene	oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed	chr3	35762637	35765116	-	downstream
3	LOC_Os12g40460	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr12	25001506	25002955	-	downstream
3	LOC_Os04g47170	ATROPGEF7/ROPGEF7, putative, expressed	gene	ATROPGEF7/ROPGEF7, putative, expressed	chr4	27828583	27831867	+	downstream
3	LOC_Os03g56330	expressed protein	gene	expressed protein	chr3	32106134	32106737	+	downstream
3	LOC_Os03g03600	fasciclin-like arabinogalactan protein, putative, expressed	gene	fasciclin-like arabinogalactan protein, putative, expressed	chr3	1578312	1579906	+	downstream
3	LOC_Os12g41940	remorin family protein, putative, expressed	gene	remorin family protein, putative, expressed	chr12	25964821	25968244	+	downstream
3	LOC_Os03g08090	hydrolase, alpha/beta fold family protein, putative, expressed	gene	hydrolase, alpha/beta fold family protein, putative, expressed	chr3	4129578	4131546	-	downstream
3	LOC_Os02g02440	hypothetical protein	gene	hypothetical protein	chr2	861602	862157	+	downstream
3	LOC_Os05g01300	expressed protein	gene	expressed protein	chr5	195354	197342	-	downstream
3	LOC_Os01g71760	amino acid permease family protein, putative	gene	amino acid permease family protein, putative	chr1	41569707	41572264	-	downstream
3	LOC_Os01g36090	DNA-damage-repair/toleration protein DRT102, putative, expressed	gene	DNA-damage-repair/toleration protein DRT102, putative, expressed	chr1	19971038	19971985	+	downstream
3	LOC_Os06g37364	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr6	22072886	22081493	-	downstream
3	LOC_Os01g22590	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr1	12700718	12703546	+	downstream
3	LOC_Os01g34580	hypothetical protein	gene	hypothetical protein	chr1	19069863	19070171	+	downstream
3	LOC_Os01g62810	regulator of chromosome condensation, putative, expressed	gene	regulator of chromosome condensation, putative, expressed	chr1	36378586	36384348	+	downstream
3	LOC_Os06g16040	expressed protein	gene	expressed protein	chr6	9125537	9128711	-	downstream
3	LOC_Os08g37760	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr8	23918292	23919963	+	downstream
3	LOC_Os12g34390	conserved hypothetical protein	gene	conserved hypothetical protein	chr12	20814521	20816387	-	downstream
3	LOC_Os07g09300	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr7	4867358	4879264	-	downstream
3	LOC_Os08g38230	hypothetical protein	gene	hypothetical protein	chr8	24233446	24233759	-	downstream
3	LOC_Os03g22410	DUF567 domain containing protein, putative, expressed	gene	DUF567 domain containing protein, putative, expressed	chr3	12833031	12833747	+	downstream
3	LOC_Os01g52080	hypothetical protein	gene	hypothetical protein	chr1	29948127	29948627	+	downstream
3	LOC_Os08g41410	glucan endo-1,3-beta-glucosidase precursor, putative	gene	glucan endo-1,3-beta-glucosidase precursor, putative	chr8	26147655	26150464	-	downstream
3	LOC_Os11g35060	agenet domain containing protein	gene	agenet domain containing protein	chr11	20074213	20078546	+	downstream
3	LOC_Os06g40010	expressed protein	gene	expressed protein	chr6	23794559	23795133	+	downstream
3	LOC_Os08g09860	hydroxyacid oxidase 1, putative, expressed	gene	hydroxyacid oxidase 1, putative, expressed	chr8	5692129	5694426	+	downstream
3	LOC_Os06g30880	hypothetical protein	gene	hypothetical protein	chr6	17936487	17936844	+	downstream
3	LOC_Os07g12580	hypothetical protein	gene	hypothetical protein	chr7	7181421	7181809	+	downstream
3	LOC_Os02g06140	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr2	3065795	3070820	-	downstream
3	LOC_Os01g55060	hypothetical protein	gene	hypothetical protein	chr1	31658477	31658746	-	downstream
3	LOC_Os08g42890	pectinesterase inhibitor domain containing protein, expressed	gene	pectinesterase inhibitor domain containing protein, expressed	chr8	27116089	27116724	+	downstream
3	LOC_Os12g17690	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr12	10126449	10133761	-	downstream
3	LOC_Os01g41740	hypothetical protein	gene	hypothetical protein	chr1	23629400	23630193	+	downstream
3	LOC_Os07g42869	unknown	gene	unknown	chr7	25669892	25670359	-	downstream
3	LOC_Os10g19300	expressed protein	gene	expressed protein	chr10	9757160	9760553	+	downstream
3	LOC_Os03g16060	expressed protein	gene	expressed protein	chr3	8850270	8853382	+	downstream
3	LOC_Os03g10740	expressed protein	gene	expressed protein	chr3	5480504	5481358	-	downstream
3	LOC_Os05g51010	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr5	29213970	29217878	-	downstream
3	LOC_Os06g46440	expressed protein	gene	expressed protein	chr6	28188529	28189857	+	downstream
3	LOC_Os06g28980	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr6	16514218	16517676	-	downstream
3	LOC_Os02g26330	expressed protein	gene	expressed protein	chr2	15461231	15461987	+	downstream
3	LOC_Os03g50310	CCT/B-box zinc finger protein, putative, expressed	gene	CCT/B-box zinc finger protein, putative, expressed	chr3	28680012	28682770	+	downstream
3	LOC_Os06g34650	zinc finger, C3HC4 type domain containing protein, expressed	gene	zinc finger, C3HC4 type domain containing protein, expressed	chr6	20142796	20143669	+	downstream
3	LOC_Os04g11840	expressed protein	gene	expressed protein	chr4	6494593	6495105	-	downstream
3	LOC_Os06g47880	cell division control protein 2 homolog 3, putative	gene	cell division control protein 2 homolog 3, putative	chr6	28966976	28968112	+	downstream
3	LOC_Os04g36700	proteasome subunit, putative, expressed	gene	proteasome subunit, putative, expressed	chr4	21983162	21985970	+	downstream
3	LOC_Os03g12739	unknown	gene	unknown	chr3	6813830	6814420	+	downstream
3	LOC_Os06g42840	hypothetical protein	gene	hypothetical protein	chr6	25744851	25745141	+	downstream
3	LOC_Os03g20000	hypothetical protein	gene	hypothetical protein	chr3	11269515	11269820	+	downstream
3	LOC_Os03g52720	magnesium-dependent phosphatase 1, putative, expressed	gene	magnesium-dependent phosphatase 1, putative, expressed	chr3	30217196	30219404	-	downstream
3	LOC_Os02g49790	aluminum-activated malate transporter, putative, expressed	gene	aluminum-activated malate transporter, putative, expressed	chr2	30429159	30431646	+	downstream
3	LOC_Os05g49580	plastocyanin-like domain containing protein, putative, expressed	gene	plastocyanin-like domain containing protein, putative, expressed	chr5	28380849	28381632	-	downstream
3	LOC_Os11g24580	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr11	13568100	13568423	-	downstream
3	LOC_Os02g12750	tetraspanin family protein, putative, expressed	gene	tetraspanin family protein, putative, expressed	chr2	6677115	6680136	+	downstream
3	LOC_Os05g07970	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr5	4315254	4316753	+	downstream
3	LOC_Os01g25910	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr1	14698734	14701043	+	downstream
3	LOC_Os10g13660	hypothetical protein	gene	hypothetical protein	chr10	7427775	7429373	+	downstream
3	LOC_Os09g25760	tetraspanin family protein, putative, expressed	gene	tetraspanin family protein, putative, expressed	chr9	15443235	15445601	+	downstream
3	LOC_Os03g06900	DNA topoisomerase 3 protein, putative, expressed	gene	DNA topoisomerase 3 protein, putative, expressed	chr3	3488865	3499126	-	downstream
3	LOC_Os12g06790	hypothetical protein	gene	hypothetical protein	chr12	3294339	3295272	-	downstream
3	LOC_Os02g56870	DEFL38 - Defensin and Defensin-like DEFL family	gene	DEFL38 - Defensin and Defensin-like DEFL family	chr2	34855907	34856271	-	downstream
3	LOC_Os09g38560	OsRCI2-11 - Hydrophobic protein OSR8, expressed	gene	OsRCI2-11 - Hydrophobic protein OSR8, expressed	chr9	22181106	22182809	+	downstream
3	LOC_Os03g05650	expressed protein	gene	expressed protein	chr3	2817993	2819121	+	downstream
3	LOC_Os03g32140	hypothetical protein	gene	hypothetical protein	chr3	18386144	18387252	-	downstream
3	LOC_Os02g13260	F-box family protein, putative, expressed	gene	F-box family protein, putative, expressed	chr2	7062837	7064444	+	downstream
3	LOC_Os07g44930	dirigent, putative, expressed	gene	dirigent, putative, expressed	chr7	26804270	26805142	+	downstream
3	LOC_Os02g02900	expressed protein	gene	expressed protein	chr2	1123522	1125414	-	downstream
3	LOC_Os03g20560	biotin--protein ligase, putative, expressed	gene	biotin--protein ligase, putative, expressed	chr3	11651682	11652686	-	downstream
3	LOC_Os02g40650	hypothetical protein	gene	hypothetical protein	chr2	24637524	24638189	+	downstream
3	LOC_Os09g37369	OsSAUR41 - Auxin-responsive SAUR gene family member	gene	OsSAUR41 - Auxin-responsive SAUR gene family member	chr9	21576973	21577558	+	downstream
3	LOC_Os10g39110	expansin precursor, putative	gene	expansin precursor, putative	chr10	20774762	20775986	+	downstream
3	LOC_Os06g49505	arogenate dehydrogenase 1, chloroplast precursor, putative, expressed	gene	arogenate dehydrogenase 1, chloroplast precursor, putative, expressed	chr6	29987042	29988103	-	downstream
3	LOC_Os02g05210	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr2	2490680	2493853	-	downstream
3	LOC_Os11g28260	hypothetical protein	gene	hypothetical protein	chr11	15783536	15783775	+	downstream
3	LOC_Os08g45030	multidrug resistance protein, putative, expressed	gene	multidrug resistance protein, putative, expressed	chr8	28261552	28267415	+	downstream
3	LOC_Os11g11760	serpin domain containing protein, putative	gene	serpin domain containing protein, putative	chr11	6526701	6528059	+	downstream
3	LOC_Os02g39795	S-adenosyl-l-methionine decarboxylase leader peptide, putative, expressed	gene	S-adenosyl-l-methionine decarboxylase leader peptide, putative, expressed	chr2	24040568	24043321	+	downstream
3	LOC_Os01g21934	unknown	gene	unknown	chr1	12300558	12301765	+	downstream
3	LOC_Os07g32140	hypothetical protein	gene	hypothetical protein	chr7	19090224	19090880	-	downstream
3	LOC_Os05g28000	hypothetical protein	gene	hypothetical protein	chr5	16284230	16284857	+	downstream
3	LOC_Os01g63770	transmembrane amino acid transporter protein, putative, expressed	gene	transmembrane amino acid transporter protein, putative, expressed	chr1	36997295	37003753	+	downstream
3	LOC_Os12g40180	expressed protein	gene	expressed protein	chr12	24838163	24838787	+	downstream
3	LOC_Os11g20750	hypothetical protein	gene	hypothetical protein	chr11	12003624	12005302	-	downstream
3	LOC_Os04g52030	zinc finger domain, LSD1 subclass family protein, expressed	gene	zinc finger domain, LSD1 subclass family protein, expressed	chr4	30719417	30722542	-	downstream
3	LOC_Os05g02690	sensitivity to red light reduced protein 1, putative, expressed	gene	sensitivity to red light reduced protein 1, putative, expressed	chr5	956005	957034	+	downstream
3	LOC_Os12g13710	hypothetical protein	gene	hypothetical protein	chr12	7725535	7727033	+	downstream
3	LOC_Os03g56580	no apical meristem protein, putative, expressed	gene	no apical meristem protein, putative, expressed	chr3	32227186	32229477	+	downstream
3	LOC_Os07g36080	oxygen evolving enhancer protein 3 domain containing protein, expressed	gene	oxygen evolving enhancer protein 3 domain containing protein, expressed	chr7	21573442	21575040	+	downstream
3	LOC_Os01g06740	ribosome inactivating protein, putative, expressed	gene	ribosome inactivating protein, putative, expressed	chr1	3187757	3189330	-	downstream
3	LOC_Os11g26962	unknown	gene	unknown	chr11	15049307	15050364	+	downstream
3	LOC_Os12g04150	alpha/beta hydrolase fold, putative, expressed	gene	alpha/beta hydrolase fold, putative, expressed	chr12	1744254	1745591	+	downstream
3	LOC_Os02g32680	lectin receptor-type protein kinase, putative, expressed	gene	lectin receptor-type protein kinase, putative, expressed	chr2	19382941	19383654	+	downstream
3	LOC_Os02g45120	expressed protein	gene	expressed protein	chr2	27363240	27365953	+	downstream
3	LOC_Os01g12460	expressed protein	gene	expressed protein	chr1	6829104	6831770	-	downstream
3	LOC_Os06g03570	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr6	1376417	1378455	+	downstream
3	LOC_Os04g52890	ATBAG1, putative, expressed	gene	ATBAG1, putative, expressed	chr4	31312153	31317668	+	downstream
3	LOC_Os10g32760	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr10	17084114	17086516	-	downstream
3	LOC_Os10g35444	hypothetical protein	gene	hypothetical protein	chr10	18883664	18885581	+	downstream
3	LOC_Os08g25860	conserved hypothetical protein	gene	conserved hypothetical protein	chr8	15747052	15751403	-	downstream
3	LOC_Os09g15830	conserved hypothetical protein	gene	conserved hypothetical protein	chr9	9660772	9661911	-	downstream
3	LOC_Os09g33850	osFTL4  FT-Like4 homologous to Flowering Locus T  gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed	gene	osFTL4  FT-Like4 homologous to Flowering Locus T  gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed	chr9	19980698	19985820	-	downstream
3	LOC_Os01g05980	receptor kinase, putative	gene	receptor kinase, putative	chr1	2850954	2854225	+	downstream
3	LOC_Os03g10930	ribosomal protein L51, putative, expressed	gene	ribosomal protein L51, putative, expressed	chr3	5612250	5614478	-	downstream
3	LOC_Os02g16670	ATP-binding domain-containing protein, putative, expressed	gene	ATP-binding domain-containing protein, putative, expressed	chr2	9523630	9531796	+	downstream
3	LOC_Os05g11040	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr5	6184980	6189631	-	downstream
3	LOC_Os01g25300	expressed protein	gene	expressed protein	chr1	14289347	14290640	+	downstream
3	LOC_Os08g32700	hypothetical protein	gene	hypothetical protein	chr8	20253994	20255745	+	downstream
3	LOC_Os06g28524	expressed protein	gene	expressed protein	chr6	16223026	16224312	+	downstream
3	LOC_Os12g42560	hypothetical protein	gene	hypothetical protein	chr12	26396592	26398755	+	downstream
3	LOC_Os12g32930	conserved hypothetical protein	gene	conserved hypothetical protein	chr12	19865970	19867224	-	downstream
3	LOC_Os10g36950	DUF677 domain containing protein, putative, expressed	gene	DUF677 domain containing protein, putative, expressed	chr10	19729517	19732267	+	downstream
3	LOC_Os08g04450	DAG protein, chloroplast precursor, putative, expressed	gene	DAG protein, chloroplast precursor, putative, expressed	chr8	2176825	2179213	-	downstream
3	LOC_Os07g41110	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr7	24602250	24608239	+	downstream
3	LOC_Os02g10530	expressed protein	gene	expressed protein	chr2	5548055	5549536	+	downstream
3	LOC_Os12g08160	conserved hypothetical protein	gene	conserved hypothetical protein	chr12	4169586	4170398	-	downstream
3	LOC_Os03g22790	beta-amylase, putative, expressed	gene	beta-amylase, putative, expressed	chr3	13160631	13162732	+	downstream
3	LOC_Os02g04610	expressed protein	gene	expressed protein	chr2	2064263	2065869	+	downstream
3	LOC_Os01g61570	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr1	35604662	35606873	+	downstream
3	LOC_Os05g29900	expressed protein	gene	expressed protein	chr5	17245249	17246224	+	downstream
3	LOC_Os02g35450	DNA repair protein Rad51, putative	gene	DNA repair protein Rad51, putative	chr2	21306134	21307006	+	downstream
3	LOC_Os10g37620	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr10	20059992	20062595	+	downstream
3	LOC_Os12g02410	hypothetical protein	gene	hypothetical protein	chr12	800669	800902	+	downstream
3	LOC_Os03g11990	bolA, putative, expressed	gene	bolA, putative, expressed	chr3	6281854	6283385	+	downstream
3	LOC_Os07g47130	OCL5 protein, putative	gene	OCL5 protein, putative	chr7	28181286	28182198	+	downstream
3	LOC_Os03g22240	hypothetical protein	gene	hypothetical protein	chr3	12755892	12756215	-	downstream
3	LOC_Os02g05240	hypothetical protein	gene	hypothetical protein	chr2	2511112	2511576	+	downstream
3	LOC_Os01g62740	expressed protein	gene	expressed protein	chr1	36322737	36323973	+	downstream
3	LOC_Os06g02520	interacting protein of DMI3, putative, expressed	gene	interacting protein of DMI3, putative, expressed	chr6	870775	874188	+	downstream
3	LOC_Os05g24910	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr5	14364470	14369343	+	downstream
3	LOC_Os11g08940	RNA polymerases N 8 kDa subunit, putative	gene	RNA polymerases N 8 kDa subunit, putative	chr11	4727921	4729946	+	downstream
3	LOC_Os06g23420	exostosin family domain containing protein, expressed	gene	exostosin family domain containing protein, expressed	chr6	13673055	13675419	-	downstream
3	LOC_Os06g50580	hypothetical protein	gene	hypothetical protein	chr6	30615737	30617164	+	downstream
3	LOC_Os09g25590	tsi1-interacting protein TSIP1, putative, expressed	gene	tsi1-interacting protein TSIP1, putative, expressed	chr9	15357372	15359770	+	downstream
3	LOC_Os05g50080	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	gene	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	chr5	28639588	28641862	+	downstream
3	LOC_Os04g45240	expressed protein	gene	expressed protein	chr4	26542149	26551850	+	downstream
3	LOC_Os07g39700	expressed protein	gene	expressed protein	chr7	23795617	23796648	+	downstream
3	LOC_Os02g48680	expressed protein	gene	expressed protein	chr2	29794850	29795946	+	downstream
3	LOC_Os07g46680	expressed protein	gene	expressed protein	chr7	27899385	27900552	-	downstream
3	LOC_Os10g24800	hypothetical protein	gene	hypothetical protein	chr10	12682725	12683401	+	downstream
3	LOC_Os06g48750	DEAD-box ATP-dependent RNA helicase, putative, expressed	gene	DEAD-box ATP-dependent RNA helicase, putative, expressed	chr6	29502681	29506320	-	downstream
3	LOC_Os08g43850	carrier, putative	gene	carrier, putative	chr8	27662239	27665146	+	downstream
3	LOC_Os01g31860	hypothetical protein	gene	hypothetical protein	chr1	17452085	17452425	+	downstream
3	LOC_Os03g03350	polygalacturonase, putative, expressed	gene	polygalacturonase, putative, expressed	chr3	1429637	1432583	+	downstream
3	LOC_Os07g38460	expressed protein	gene	expressed protein	chr7	23105253	23107170	+	downstream
3	LOC_Os12g12934	peptide transporter PTR3-A, putative, expressed	gene	peptide transporter PTR3-A, putative, expressed	chr12	7163195	7168416	+	downstream
3	LOC_Os09g37920	helicase, putative, expressed	gene	helicase, putative, expressed	chr9	21859936	21867685	-	downstream
3	LOC_Os09g24680	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr9	14686747	14689179	-	downstream
3	LOC_Os10g32720	AWPM-19-like membrane family protein, putative, expressed	gene	AWPM-19-like membrane family protein, putative, expressed	chr10	17060688	17061486	-	downstream
3	LOC_Os12g04850	hypothetical protein	gene	hypothetical protein	chr12	2085426	2085609	+	downstream
3	LOC_Os06g48870	methyl-binding domain protein MBD, putative, expressed	gene	methyl-binding domain protein MBD, putative, expressed	chr6	29589660	29594772	+	downstream
3	LOC_Os01g37460	zinc finger family protein, putative, expressed	gene	zinc finger family protein, putative, expressed	chr1	20934744	20936401	+	downstream
3	LOC_Os02g04720	hypothetical protein	gene	hypothetical protein	chr2	2140691	2141328	+	downstream
3	LOC_Os04g56570	heavy metal-associated domain containing protein, expressed	gene	heavy metal-associated domain containing protein, expressed	chr4	33548488	33549206	-	downstream
3	LOC_Os05g35430	expressed protein	gene	expressed protein	chr5	20985796	20986607	-	downstream
3	LOC_Os07g26510	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr7	15274217	15278143	+	downstream
3	LOC_Os01g37810	expressed protein	gene	expressed protein	chr1	21149374	21150036	+	downstream
3	LOC_Os03g56850	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr3	32381835	32385092	+	downstream
3	LOC_Os02g44630	aquaporin protein, putative, expressed	gene	aquaporin protein, putative, expressed	chr2	27038450	27041584	+	downstream
3	LOC_Os02g51740	VQ domain containing protein, putative, expressed	gene	VQ domain containing protein, putative, expressed	chr2	31688258	31691637	+	downstream
3	LOC_Os03g19059	anaphase-promoting complex subunit 11, putative, expressed	gene	anaphase-promoting complex subunit 11, putative, expressed	chr3	10671499	10672974	+	downstream
3	LOC_Os03g04370	protein-methionine-S-oxide reductase, putative, expressed	gene	protein-methionine-S-oxide reductase, putative, expressed	chr3	2013044	2013766	+	downstream
3	LOC_Os06g51450	PHD-finger domain containing protein, expressed	gene	PHD-finger domain containing protein, expressed	chr6	31160701	31168515	-	downstream
3	LOC_Os05g43300	expressed protein	gene	expressed protein	chr5	25125636	25130555	+	downstream
3	LOC_Os09g38400	prostatic spermine-binding protein precursor, putative, expressed	gene	prostatic spermine-binding protein precursor, putative, expressed	chr9	22104388	22106620	+	downstream
3	LOC_Os02g52820	cold-induced protein, putative, expressed	gene	cold-induced protein, putative, expressed	chr2	32289451	32292822	+	downstream
3	LOC_Os12g04500	response regulator receiver domain containing protein	gene	response regulator receiver domain containing protein	chr12	1914854	1916596	+	downstream
3	LOC_Os01g16124	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr1	9094172	9098512	+	downstream
3	LOC_Os12g11860	verticillium wilt disease resistance protein precursor, putative	gene	verticillium wilt disease resistance protein precursor, putative	chr12	6446148	6449165	+	downstream
3	LOC_Os06g01350	transferase family protein, putative, expressed	gene	transferase family protein, putative, expressed	chr6	211913	213728	+	downstream
3	LOC_Os11g07430	proteophosphoglycan ppg1, putative, expressed	gene	proteophosphoglycan ppg1, putative, expressed	chr11	3733011	3734936	-	downstream
3	LOC_Os04g30170	hypothetical protein	gene	hypothetical protein	chr4	17839297	17839912	-	downstream
3	LOC_Os08g42520	hypothetical protein	gene	hypothetical protein	chr8	26865168	26867339	+	downstream
3	LOC_Os02g02010	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	558915	559965	+	downstream
3	LOC_Os06g09530	conserved hypothetical protein	gene	conserved hypothetical protein	chr6	4841375	4842370	+	downstream
3	LOC_Os07g44160	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr7	26393123	26395863	+	downstream
3	LOC_Os02g15910	hypothetical protein	gene	hypothetical protein	chr2	9009848	9010538	+	downstream
3	LOC_Os09g24310	expressed protein	gene	expressed protein	chr9	14444601	14453034	+	downstream
3	LOC_Os03g40770	expressed protein	gene	expressed protein	chr3	22665211	22667526	+	downstream
3	LOC_Os05g38790	IQ calmodulin-binding motif domain containing protein, expressed	gene	IQ calmodulin-binding motif domain containing protein, expressed	chr5	22693366	22696264	-	downstream
3	LOC_Os03g21610	hypothetical protein	gene	hypothetical protein	chr3	12337022	12338523	-	downstream
3	LOC_Os06g03920	expressed protein	gene	expressed protein	chr6	1579238	1580873	+	downstream
3	LOC_Os01g56870	expressed protein	gene	expressed protein	chr1	32841618	32846840	+	downstream
3	LOC_Os04g28470	retrotransposon protein, putative, unclassified, expressed	gene	retrotransposon protein, putative, unclassified, expressed	chr4	16688424	16690594	+	downstream
3	LOC_Os04g33640	glycosyl hydrolases family 17, putative, expressed	gene	glycosyl hydrolases family 17, putative, expressed	chr4	20200957	20206003	+	downstream
3	LOC_Os03g11060	MFP1 attachment factor 1, putative, expressed	gene	MFP1 attachment factor 1, putative, expressed	chr3	5685615	5686605	+	downstream
3	LOC_Os08g26860	hypothetical protein	gene	hypothetical protein	chr8	16334765	16336224	+	downstream
3	LOC_Os03g43100	expressed protein	gene	expressed protein	chr3	24044262	24045416	+	downstream
3	LOC_Os01g02710	LRk-type protein, putative	gene	LRk-type protein, putative	chr1	923451	924175	+	downstream
3	LOC_Os05g40285	expressed protein	gene	expressed protein	chr5	23608980	23609923	-	downstream
3	LOC_Os10g42770	a_IG002N01.7, putative	gene	a_IG002N01.7, putative	chr10	23002529	23003719	-	downstream
3	LOC_Os12g37560	phospholipase C, putative, expressed	gene	phospholipase C, putative, expressed	chr12	23015165	23019784	+	downstream
3	LOC_Os10g40090	expansin precursor, putative, expressed	gene	expansin precursor, putative, expressed	chr10	21393486	21395326	+	downstream
3	LOC_Os10g41120	expressed protein	gene	expressed protein	chr10	22012150	22015608	+	downstream
3	LOC_Os04g47510	hypothetical protein	gene	hypothetical protein	chr4	27995555	27995911	+	downstream
3	LOC_Os01g73110	expressed protein	gene	expressed protein	chr1	42410895	42412183	+	downstream
3	LOC_Os06g18860	transposon protein, putative, unclassified	gene	transposon protein, putative, unclassified	chr6	10714502	10717209	-	downstream
3	LOC_Os12g17820	expressed protein	gene	expressed protein	chr12	10204463	10205083	-	downstream
3	LOC_Os09g37394	OsSAUR44 - Auxin-responsive SAUR gene family member	gene	OsSAUR44 - Auxin-responsive SAUR gene family member	chr9	21583547	21584243	+	downstream
3	LOC_Os01g18620	transferase family protein, putative	gene	transferase family protein, putative	chr1	10487924	10489970	-	downstream
3	LOC_Os05g49670	expressed protein	gene	expressed protein	chr5	28424598	28425569	+	downstream
3	LOC_Os08g20400	adenylate cyclase family protein, expressed	gene	adenylate cyclase family protein, expressed	chr8	12247271	12248370	+	downstream
3	LOC_Os02g39720	splicing factor, arginine/serine-rich 7, putative, expressed	gene	splicing factor, arginine/serine-rich 7, putative, expressed	chr2	23986256	23990524	-	downstream
3	LOC_Os03g44520	expressed protein	gene	expressed protein	chr3	25059498	25060455	+	downstream
3	LOC_Os08g40600	thaumatin, putative	gene	thaumatin, putative	chr8	25697433	25698909	-	downstream
3	LOC_Os03g36720	retrotransposon protein, putative, Ty3-gypsy subclass	gene	retrotransposon protein, putative, Ty3-gypsy subclass	chr3	20359254	20361335	-	downstream
3	LOC_Os07g04470	GRF zinc finger family protein	gene	GRF zinc finger family protein	chr7	1975292	1976489	+	downstream
3	LOC_Os06g48920	hypothetical protein	gene	hypothetical protein	chr6	29615225	29618291	+	downstream
3	LOC_Os03g22440	RALFL15 - Rapid ALkalinization Factor RALF family protein precursor, putative	gene	RALFL15 - Rapid ALkalinization Factor RALF family protein precursor, putative	chr3	12861330	12861740	-	downstream
3	LOC_Os06g09560	heat shock protein DnaJ, putative, expressed	gene	heat shock protein DnaJ, putative, expressed	chr6	4866844	4869169	+	downstream
3	LOC_Os01g69950	ribosomal protein L27, putative, expressed	gene	ribosomal protein L27, putative, expressed	chr1	40452786	40455636	+	downstream
3	LOC_Os04g06840	conserved hypothetical protein	gene	conserved hypothetical protein	chr4	3602963	3604207	+	downstream
3	LOC_Os03g58870	expressed protein	gene	expressed protein	chr3	33509859	33511772	-	downstream
3	LOC_Os11g12270	expressed protein	gene	expressed protein	chr11	6846960	6849650	+	downstream
3	LOC_Os09g30458	subtilisin-like protease, putative, expressed	gene	subtilisin-like protease, putative, expressed	chr9	18557401	18562783	-	downstream
3	LOC_Os07g43300	hypothetical protein	gene	hypothetical protein	chr7	25926096	25927754	+	downstream
3	LOC_Os05g41920	conserved hypothetical protein	gene	conserved hypothetical protein	chr5	24488602	24489267	+	downstream
3	LOC_Os07g14150	cytidine deaminase, putative, expressed	gene	cytidine deaminase, putative, expressed	chr7	8074632	8077206	+	downstream
3	LOC_Os06g41830	SMP-30/Gluconolaconase/LRE-like region containing protein	gene	SMP-30/Gluconolaconase/LRE-like region containing protein	chr6	25084540	25085529	+	downstream
3	LOC_Os02g57960	Leucine Rich Repeat family protein	gene	Leucine Rich Repeat family protein	chr2	35492353	35495167	-	downstream
3	LOC_Os01g37110	ABIL2, putative, expressed	gene	ABIL2, putative, expressed	chr1	20713093	20715663	+	downstream
3	LOC_Os11g43530	OsGrx_C13 - glutaredoxin subgroup III	gene	OsGrx_C13 - glutaredoxin subgroup III	chr11	25804223	25804775	+	downstream
3	LOC_Os02g54640	glutamate receptor, putative, expressed	gene	glutamate receptor, putative, expressed	chr2	33463269	33470158	+	downstream
3	LOC_Os05g50270	GATA zinc finger domain containing protein, expressed	gene	GATA zinc finger domain containing protein, expressed	chr5	28754960	28756226	+	downstream
3	LOC_Os09g08379	hypothetical protein	gene	hypothetical protein	chr9	4347090	4347513	+	downstream
3	LOC_Os10g39940	hypothetical protein	gene	hypothetical protein	chr10	21316707	21317877	+	downstream
3	LOC_Os01g33760	hypothetical protein	gene	hypothetical protein	chr1	18580977	18582193	+	downstream
3	LOC_Os02g36700	sucrose transporter BoSUT1, putative, expressed	gene	sucrose transporter BoSUT1, putative, expressed	chr2	22140551	22144278	-	downstream
3	LOC_Os01g57260	vacuolar protein sorting-associated protein 28 homolog 2, putative, expressed	gene	vacuolar protein sorting-associated protein 28 homolog 2, putative, expressed	chr1	33088138	33089268	+	downstream
3	LOC_Os05g41166	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr5	24048260	24052247	-	downstream
3	LOC_Os11g03750	PME/invertase inhibitor, putative	gene	PME/invertase inhibitor, putative	chr11	1470820	1471377	-	downstream
3	LOC_Os09g38510	purine permease, putative, expressed	gene	purine permease, putative, expressed	chr9	22156445	22159119	-	downstream
3	LOC_Os12g40780	ankyrin repeat domain-containing protein 44, putative, expressed	gene	ankyrin repeat domain-containing protein 44, putative, expressed	chr12	25208796	25213187	+	downstream
3	LOC_Os08g37290	basic helix-loop-helix, putative, expressed	gene	basic helix-loop-helix, putative, expressed	chr8	23569849	23570674	+	downstream
3	LOC_Os11g04840	phosphatidylinositol-4-phosphate 5-kinase, putative, expressed	gene	phosphatidylinositol-4-phosphate 5-kinase, putative, expressed	chr11	2055250	2059246	-	downstream
3	LOC_Os08g09090	hypothetical protein	gene	hypothetical protein	chr8	5265878	5266492	-	downstream
3	LOC_Os08g08850	carotenoid synthesis regulator CarF, putative, expressed	gene	carotenoid synthesis regulator CarF, putative, expressed	chr8	5144635	5145565	+	downstream
3	LOC_Os05g48950	expressed protein	gene	expressed protein	chr5	28014681	28015882	+	downstream
3	LOC_Os06g40440	expressed protein	gene	expressed protein	chr6	24088906	24090220	+	downstream
3	LOC_Os03g01590	PAIR1, putative, expressed	gene	PAIR1, putative, expressed	chr3	369149	373688	-	downstream
3	LOC_Os01g55520	ATROPGEF7/ROPGEF7, putative, expressed	gene	ATROPGEF7/ROPGEF7, putative, expressed	chr1	31985455	31988193	+	downstream
3	LOC_Os10g24010	OsFBX383 - F-box domain containing protein	gene	OsFBX383 - F-box domain containing protein	chr10	12234230	12236166	+	downstream
3	LOC_Os02g32330	expressed protein	gene	expressed protein	chr2	19082554	19083893	+	downstream
3	LOC_Os12g06840	ATEXO70C2, putative, expressed	gene	ATEXO70C2, putative, expressed	chr12	3321231	3323724	-	downstream
3	LOC_Os02g05250	hypothetical protein	gene	hypothetical protein	chr2	2521222	2522074	-	downstream
3	LOC_Os01g14970	expressed protein	gene	expressed protein	chr1	8393453	8394803	+	downstream
3	LOC_Os03g62860	glucan endo-1,3-beta-glucosidase precursor, putative, expressed	gene	glucan endo-1,3-beta-glucosidase precursor, putative, expressed	chr3	35551573	35554049	-	downstream
3	LOC_Os11g07860	hypothetical protein	gene	hypothetical protein	chr11	4010554	4012856	+	downstream
3	LOC_Os02g43594	MSP domain containing protein, putative, expressed	gene	MSP domain containing protein, putative, expressed	chr2	26303516	26310214	-	downstream
3	LOC_Os06g23180	conserved hypothetical protein	gene	conserved hypothetical protein	chr6	13537871	13539417	+	downstream
3	LOC_Os06g24900	hypothetical protein	gene	hypothetical protein	chr6	14599887	14600672	+	downstream
3	LOC_Os07g16364	expressed protein	gene	expressed protein	chr7	9563931	9565201	+	downstream
3	LOC_Os08g37710	expressed protein	gene	expressed protein	chr8	23877882	23880324	-	downstream
3	LOC_Os04g14430	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr4	8075354	8077863	+	downstream
3	LOC_Os04g47810	ethylene-responsive protein related, putative, expressed	gene	ethylene-responsive protein related, putative, expressed	chr4	28184224	28186705	-	downstream
3	LOC_Os05g25340	hypothetical protein	gene	hypothetical protein	chr5	14657042	14657809	+	downstream
3	LOC_Os12g05640	pentatricopeptide containing protein, putative, expressed	gene	pentatricopeptide containing protein, putative, expressed	chr12	2591074	2593900	-	downstream
3	LOC_Os11g01730	laccase-23 precursor, putative, expressed	gene	laccase-23 precursor, putative, expressed	chr11	391254	395913	+	downstream
3	LOC_Os06g51350	IPP transferase, putative, expressed	gene	IPP transferase, putative, expressed	chr6	31099871	31101440	+	downstream
3	LOC_Os03g50250	DnaK family protein, putative, expressed	gene	DnaK family protein, putative, expressed	chr3	28640139	28642623	+	downstream
3	LOC_Os08g42710	NB-ARC domain containing protein	gene	NB-ARC domain containing protein	chr8	27014248	27024515	+	downstream
3	LOC_Os12g32284	glycine-rich protein, putative, expressed	gene	glycine-rich protein, putative, expressed	chr12	19464631	19466392	+	downstream
3	LOC_Os08g34310	ZOS8-05 - C2H2 zinc finger protein	gene	ZOS8-05 - C2H2 zinc finger protein	chr8	21528625	21532524	-	downstream
3	LOC_Os03g31090	40S ribosomal protein S19, putative	gene	40S ribosomal protein S19, putative	chr3	17713743	17715214	+	downstream
3	LOC_Os01g27580	transposon protein, putative, Pong sub-class	gene	transposon protein, putative, Pong sub-class	chr1	15386427	15387801	-	downstream
3	LOC_Os02g04945	phosphatidate cytidylyltransferase family protein, putative, expressed	gene	phosphatidate cytidylyltransferase family protein, putative, expressed	chr2	2312148	2317214	-	downstream
3	LOC_Os04g58555	X8 domain containing protein	gene	X8 domain containing protein	chr4	34629139	34630105	-	downstream
3	LOC_Os03g61630	WD domain, G-beta repeat domain containing protein, expressed	gene	WD domain, G-beta repeat domain containing protein, expressed	chr3	34932128	34934236	+	downstream
3	LOC_Os03g30510	conserved hypothetical protein	gene	conserved hypothetical protein	chr3	17402558	17407731	+	downstream
3	LOC_Os10g10260	expressed protein	gene	expressed protein	chr10	5661356	5662243	-	downstream
3	LOC_Os03g08970	expressed protein	gene	expressed protein	chr3	4659803	4661072	+	downstream
3	LOC_Os03g30290	expressed protein	gene	expressed protein	chr3	17284671	17286104	+	downstream
3	LOC_Os09g20930	expressed protein	gene	expressed protein	chr9	12599632	12601388	+	downstream
3	LOC_Os01g14910	hypothetical protein	gene	hypothetical protein	chr1	8353456	8354040	+	downstream
3	LOC_Os10g12330	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr10	6876124	6880442	-	downstream
3	LOC_Os10g36190	PPR repeat domain containing protein, putative, expressed	gene	PPR repeat domain containing protein, putative, expressed	chr10	19278716	19280506	+	downstream
3	LOC_Os03g50030	phospholipase A2, putative, expressed	gene	phospholipase A2, putative, expressed	chr3	28541404	28543083	+	downstream
3	LOC_Os02g07140	hypothetical protein	gene	hypothetical protein	chr2	3673312	3673617	-	downstream
3	LOC_Os08g36490	kinetochore protein, putative, expressed	gene	kinetochore protein, putative, expressed	chr8	23036702	23041911	+	downstream
3	LOC_Os01g45630	transposon protein, putative, Mutator sub-class	gene	transposon protein, putative, Mutator sub-class	chr1	25924336	25924878	-	downstream
3	LOC_Os03g03550	bZIP family transcription factor, putative, expressed	gene	bZIP family transcription factor, putative, expressed	chr3	1550422	1552817	+	downstream
3	LOC_Os07g10380	conserved hypothetical protein	gene	conserved hypothetical protein	chr7	5565677	5566141	+	downstream
3	LOC_Os07g02930	OsFBX210 - F-box domain containing protein	gene	OsFBX210 - F-box domain containing protein	chr7	1092242	1093754	-	downstream
3	LOC_Os11g15570	Ser/Thr protein phosphatase family protein, putative, expressed	gene	Ser/Thr protein phosphatase family protein, putative, expressed	chr11	8820917	8822425	+	downstream
3	LOC_Os05g41270	CAMK_CAMK_like.4 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	gene	CAMK_CAMK_like.4 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	chr5	24112892	24115610	-	downstream
3	LOC_Os10g22394	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr10	11517569	11523942	+	downstream
3	LOC_Os12g40325	unknown	gene	unknown	chr12	24939055	24939311	+	downstream
3	LOC_Os05g50460	pentatricopeptide, putative	gene	pentatricopeptide, putative	chr5	28861480	28863384	+	downstream
3	LOC_Os01g52240	chlorophyll A-B binding protein, putative, expressed	gene	chlorophyll A-B binding protein, putative, expressed	chr1	30029953	30031009	+	downstream
3	LOC_Os12g04200	GRAS family transcription factor containing protein	gene	GRAS family transcription factor containing protein	chr12	1765096	1766963	+	downstream
3	LOC_Os01g25780	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr1	14606482	14608006	+	downstream
3	LOC_Os02g23910	hypothetical protein	gene	hypothetical protein	chr2	13849071	13849337	+	downstream
3	LOC_Os12g15520	expressed protein	gene	expressed protein	chr12	8856763	8858428	+	downstream
3	LOC_Os11g31470	expressed protein	gene	expressed protein	chr11	17915879	17924311	+	downstream
3	LOC_Os09g28890	transposon protein, putative, CACTA, En/Spm sub-class, expressed	gene	transposon protein, putative, CACTA, En/Spm sub-class, expressed	chr9	17555928	17557590	+	downstream
3	LOC_Os01g39620	hypothetical protein	gene	hypothetical protein	chr1	22350055	22350569	-	downstream
3	LOC_Os08g43450	MYB-like protein 1, putative, expressed	gene	MYB-like protein 1, putative, expressed	chr8	27483454	27486084	-	downstream
3	LOC_Os07g20570	hypothetical protein	gene	hypothetical protein	chr7	11883926	11884710	-	downstream
3	LOC_Os01g05450	hypothetical protein	gene	hypothetical protein	chr1	2572049	2573201	-	downstream
3	LOC_Os09g32972	MYB protein, putative	gene	MYB protein, putative	chr9	19681668	19682492	+	downstream
3	LOC_Os02g42780	lectin receptor-type protein kinase, putative, expressed	gene	lectin receptor-type protein kinase, putative, expressed	chr2	25718086	25720213	-	downstream
3	LOC_Os08g06415	expressed protein	gene	expressed protein	chr8	3593204	3594317	-	downstream
3	LOC_Os08g36140	expressed protein	gene	expressed protein	chr8	22770253	22772445	+	downstream
3	LOC_Os02g29450	conserved hypothetical protein	gene	conserved hypothetical protein	chr2	17482176	17482637	+	downstream
3	LOC_Os02g39910	B4-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed	gene	B4-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed	chr2	24127314	24133504	-	downstream
3	LOC_Os11g05290	stress responsive A/B Barrel domain containing protein, expressed	gene	stress responsive A/B Barrel domain containing protein, expressed	chr11	2339475	2340572	-	downstream
3	LOC_Os06g22100	DNA binding protein, putative, expressed	gene	DNA binding protein, putative, expressed	chr6	12824420	12826566	+	downstream
3	LOC_Os02g09630	GA20292-PA, putative, expressed	gene	GA20292-PA, putative, expressed	chr2	4949529	4952480	-	downstream
3	LOC_Os03g57310	syntaxin, putative, expressed	gene	syntaxin, putative, expressed	chr3	32687405	32688981	+	downstream
3	LOC_Os03g62480	anthocyanidin 5,3-O-glucosyltransferase, putative, expressed	gene	anthocyanidin 5,3-O-glucosyltransferase, putative, expressed	chr3	35373057	35374850	-	downstream
3	LOC_Os10g34990	ubiquitin-carboxyl extension, putative, expressed	gene	ubiquitin-carboxyl extension, putative, expressed	chr10	18595064	18595537	-	downstream
3	LOC_Os04g48830	DUF623 domain containing protein, expressed	gene	DUF623 domain containing protein, expressed	chr4	28936559	28938027	+	downstream
3	LOC_Os05g47830	expressed protein	gene	expressed protein	chr5	27355252	27356429	+	downstream
3	LOC_Os03g39650	cytochrome P450, putative, expressed	gene	cytochrome P450, putative, expressed	chr3	22046977	22051049	+	downstream
3	LOC_Os03g22940	expressed protein	gene	expressed protein	chr3	13255607	13256458	+	downstream
3	LOC_Os09g24640	pentatricopeptide, putative, expressed	gene	pentatricopeptide, putative, expressed	chr9	14665228	14666808	+	downstream
3	LOC_Os08g15020	MYB family transcription factor, putative, expressed	gene	MYB family transcription factor, putative, expressed	chr8	9068086	9069677	+	downstream
3	LOC_Os08g25360	hypothetical protein	gene	hypothetical protein	chr8	15421448	15421774	-	downstream
3	LOC_Os11g36020	leucine rich repeat protein, putative	gene	leucine rich repeat protein, putative	chr11	20709596	20711533	+	downstream
3	LOC_Os09g07290	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr9	3580289	3585049	-	downstream
3	LOC_Os02g03310	KH domain containing protein, putative, expressed	gene	KH domain containing protein, putative, expressed	chr2	1334563	1338610	+	downstream
3	LOC_Os02g04850	expressed protein	gene	expressed protein	chr2	2241066	2242600	-	downstream
3	LOC_Os02g19640	IQ calmodulin-binding motif family protein, putative, expressed	gene	IQ calmodulin-binding motif family protein, putative, expressed	chr2	11478226	11484088	+	downstream
3	LOC_Os05g32120	alpha 1,3-xylosyltransferase, putative, expressed	gene	alpha 1,3-xylosyltransferase, putative, expressed	chr5	18666351	18668818	+	downstream
3	LOC_Os09g27900	plastidic glucose transporter 1, putative	gene	plastidic glucose transporter 1, putative	chr9	16962592	16964489	+	downstream
3	LOC_Os12g21560	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr12	12115592	12118973	-	downstream
3	LOC_Os08g22852	expressed protein	gene	expressed protein	chr8	13736087	13737705	+	downstream
3	LOC_Os03g60080	NAC domain-containing protein 67, putative, expressed	gene	NAC domain-containing protein 67, putative, expressed	chr3	34158969	34160416	+	downstream
3	LOC_Os06g30220	retrotransposon protein, putative, unclassified	gene	retrotransposon protein, putative, unclassified	chr6	17441125	17442234	+	downstream
3	LOC_Os01g48250	OsFBDUF5 - F-box and DUF domain containing protein, expressed	gene	OsFBDUF5 - F-box and DUF domain containing protein, expressed	chr1	27655217	27657034	+	downstream
3	LOC_Os08g04130	copine-6, putative, expressed	gene	copine-6, putative, expressed	chr8	2006747	2010768	+	downstream
3	LOC_Os07g37980	cytochrome P450 51, putative	gene	cytochrome P450 51, putative	chr7	22787938	22790193	+	downstream
3	LOC_Os07g44180	OsRCI2-10 - Hydrophobic protein LTI6A, expressed	gene	OsRCI2-10 - Hydrophobic protein LTI6A, expressed	chr7	26402680	26403735	+	downstream
3	LOC_Os12g35260	expressed protein	gene	expressed protein	chr12	21393839	21394676	-	downstream
3	LOC_Os08g06220	transferase, putative, expressed	gene	transferase, putative, expressed	chr8	3429908	3431345	+	downstream
3	LOC_Os03g43410	OsIAA12 - Auxin-responsive Aux/IAA gene family member, expressed	gene	OsIAA12 - Auxin-responsive Aux/IAA gene family member, expressed	chr3	24210633	24211939	+	downstream
3	LOC_Os11g09270	ankyrin repeat family protein, putative	gene	ankyrin repeat family protein, putative	chr11	4964702	4965853	-	downstream
3	LOC_Os04g22860	protein phosphatase 1 regulatory subunit 11, putative, expressed	gene	protein phosphatase 1 regulatory subunit 11, putative, expressed	chr4	12944210	12945436	+	downstream
3	LOC_Os01g15390	expressed protein	gene	expressed protein	chr1	8626820	8628150	+	downstream
3	LOC_Os02g39790	CPuORF9 - conserved peptide uORF-containing transcript, expressed	gene	CPuORF9 - conserved peptide uORF-containing transcript, expressed	chr2	24039375	24042577	+	downstream
3	LOC_Os06g42690	bZIP transcription factor domain containing protein, expressed	gene	bZIP transcription factor domain containing protein, expressed	chr6	25675969	25676493	+	downstream
3	LOC_Os12g34440	expressed protein	gene	expressed protein	chr12	20827615	20829551	+	downstream
3	LOC_Os04g57290	OsFBX153 - F-box domain containing protein, expressed	gene	OsFBX153 - F-box domain containing protein, expressed	chr4	33925215	33927102	+	downstream
3	LOC_Os02g38460	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr2	23245931	23248303	-	downstream
3	LOC_Os03g55720	cytochrome b6f complex subunit, putative, expressed	gene	cytochrome b6f complex subunit, putative, expressed	chr3	31717979	31718777	+	downstream
3	LOC_Os02g01160	skp1 family, tetramerisation domain containing protein	gene	skp1 family, tetramerisation domain containing protein	chr2	85332	85637	-	downstream
3	LOC_Os02g52240	hypothetical protein	gene	hypothetical protein	chr2	31987873	31988925	+	downstream
3	LOC_Os06g07470	expressed protein	gene	expressed protein	chr6	3584218	3587273	+	downstream
3	LOC_Os03g57120	ferredoxin--NADP reductase, chloroplast precursor, putative, expressed	gene	ferredoxin--NADP reductase, chloroplast precursor, putative, expressed	chr3	32559330	32562489	-	downstream
3	LOC_Os04g38410	chlorophyll A-B binding protein, putative, expressed	gene	chlorophyll A-B binding protein, putative, expressed	chr4	22650779	22652477	-	downstream
3	LOC_Os02g12310	no apical meristem protein, putative, expressed	gene	no apical meristem protein, putative, expressed	chr2	6404018	6405879	+	downstream
3	LOC_Os10g34930	secretory protein, putative, expressed	gene	secretory protein, putative, expressed	chr10	18568954	18570494	+	downstream
3	LOC_Os05g43460	DUF567 domain containing protein, putative, expressed	gene	DUF567 domain containing protein, putative, expressed	chr5	25203626	25204638	+	downstream
3	LOC_Os06g03830	retinol dehydrogenase, putative, expressed	gene	retinol dehydrogenase, putative, expressed	chr6	1538029	1541213	+	downstream
3	LOC_Os03g60900	expressed protein	gene	expressed protein	chr3	34600406	34601096	-	downstream
3	LOC_Os02g14874	expressed protein	gene	expressed protein	chr2	8276805	8278502	+	downstream
3	LOC_Os05g37820	transporter, major facilitator family, putative, expressed	gene	transporter, major facilitator family, putative, expressed	chr5	22093419	22097160	+	downstream
3	LOC_Os01g33710	expressed protein	gene	expressed protein	chr1	18554657	18555767	+	downstream
3	LOC_Os11g33320	OsFBX425 - F-box domain containing protein, expressed	gene	OsFBX425 - F-box domain containing protein, expressed	chr11	19240586	19242727	+	downstream
3	LOC_Os12g04580	EF hand family protein, putative	gene	EF hand family protein, putative	chr12	1936309	1936617	+	downstream
3	LOC_Os08g41030	AP2 domain containing protein, expressed	gene	AP2 domain containing protein, expressed	chr8	25947544	25948452	+	downstream
3	LOC_Os01g25789	unknown	gene	unknown	chr1	14608274	14608471	-	downstream
3	LOC_Os02g20960	expressed protein	gene	expressed protein	chr2	12396205	12397782	-	downstream
3	LOC_Os07g39720	expressed protein	gene	expressed protein	chr7	23806442	23807338	+	downstream
3	LOC_Os05g07950	OsFBX160 - F-box domain containing protein	gene	OsFBX160 - F-box domain containing protein	chr5	4309073	4310399	-	downstream
3	LOC_Os02g30050	ribosomal protein L29, putative, expressed	gene	ribosomal protein L29, putative, expressed	chr2	17840416	17842029	+	downstream
3	LOC_Os03g05300	cyclin-dependent kinases regulatory subunit 1, putative, expressed	gene	cyclin-dependent kinases regulatory subunit 1, putative, expressed	chr3	2571059	2571530	+	downstream
3	LOC_Os04g44070	hypothetical protein	gene	hypothetical protein	chr4	25918738	25919269	+	downstream
3	LOC_Os02g43980	hypothetical protein	gene	hypothetical protein	chr2	26559835	26560185	-	downstream
3	LOC_Os01g23580	inorganic H+ pyrophosphatase, putative, expressed	gene	inorganic H+ pyrophosphatase, putative, expressed	chr1	13236222	13245157	+	downstream
3	LOC_Os04g57390	acyl-protein thioesterase, putative, expressed	gene	acyl-protein thioesterase, putative, expressed	chr4	33968084	33969849	-	downstream
3	LOC_Os01g71624	expressed protein	gene	expressed protein	chr1	41494664	41497613	+	downstream
3	LOC_Os11g46950	wall-associated receptor kinase-like 18 precursor, putative, expressed	gene	wall-associated receptor kinase-like 18 precursor, putative, expressed	chr11	27691989	27700043	+	downstream
3	LOC_Os06g05510	expressed protein	gene	expressed protein	chr6	2496604	2497203	-	downstream
3	LOC_Os03g11819	hypothetical protein	gene	hypothetical protein	chr3	6181381	6182816	+	downstream
3	LOC_Os05g04740	helix-loop-helix DNA-binding domain containing protein, expressed	gene	helix-loop-helix DNA-binding domain containing protein, expressed	chr5	2246810	2248853	+	downstream
3	LOC_Os02g26690	retrotransposon protein, putative, Ty1-copia subclass	gene	retrotransposon protein, putative, Ty1-copia subclass	chr2	15664361	15669683	+	downstream
3	LOC_Os02g49140	glycosyltransferase, putative, expressed	gene	glycosyltransferase, putative, expressed	chr2	30045728	30047497	+	downstream
3	LOC_Os07g26960	kinesin-like protein, identical, putative	gene	kinesin-like protein, identical, putative	chr7	15613589	15615344	+	downstream
3	LOC_Os01g52770	GDSL-like lipase/acylhydrolase, putative, expressed	gene	GDSL-like lipase/acylhydrolase, putative, expressed	chr1	30360711	30363057	+	downstream
3	LOC_Os08g37590	hypothetical protein	gene	hypothetical protein	chr8	23805390	23806450	+	downstream
3	LOC_Os08g18030	hypothetical protein	gene	hypothetical protein	chr8	11050902	11053738	+	downstream
3	LOC_Os02g43490	hypothetical protein	gene	hypothetical protein	chr2	26240930	26242296	+	downstream