HOEWYK_SE_ROOT_DN Downregulated Se-reponsive genes in root tissue (Table 1A PubmedID:18251864) AT3G01500,AT1G67870,AT1G52820,AT4G08300,AT1G24575,AT4G13390,AT2G10940,AT4G00670,AT5G28520,AT3G08940,AT1G34510,AT2G42250,AT1G70450,AT3G61210,AT4G35770,AT1G73220,AT5G57530,AT1G64370,AT5G50260,AT3G45710,AT3G10710,AT1G52690,AT5G61590,AT5G06900,AT5G43780,AT5G57785,AT4G28240,AT4G40090,AT5G35190,AT2G22990,AT2G27540,AT1G75820,AT4G01390,AT1G01190,AT5G22410,AT1G34540,AT2G38500,AT5G24313,AT2G20520,AT5G06760,AT4G02270,AT3G12540,AT5G44400,AT5G67400,AT1G29910,AT5G04960,AT4G31730,AT2G38400,AT4G37800,AT1G02640,AT2G33850,AT4G37220,AT4G22080,AT5G49080,AT2G31930,AT5G19800,AT3G07070,AT1G13600,AT4G09010,AT3G29410,AT3G14280,AT2G45220,AT5G19970,AT4G25820,AT2G39510,AT5G23030,AT5G54270,AT4G00680,AT2G33830,AT4G33730,AT4G02770,AT1G19960,AT4G38390,AT1G23390,AT3G02480,AT1G52230,AT4G34580,AT3G62680,AT1G21920,AT4G38690,AT3G54890,AT2G37130,AT4G04630,AT4G25790,AT2G46690,AT4G36670,AT3G60280,AT4G17470,AT4G34560,AT5G18240,AT2G34430,AT5G44410,AT2G25900,AT5G24490,AT5G53190,AT4G40070,AT5G64120,AT2G16005,AT1G14890,AT1G55670,AT2G45210,AT4G00780,AT3G52060,AT1G24600,AT3G54580,AT2G04038,AT2G05070,AT4G12550,AT1G19720,AT1G61950,AT1G76800,AT1G67090,AT4G23496,AT3G60330,AT5G42590,AT2G47400,AT3G63210,AT3G47040,AT4G04990,AT3G48360,AT1G12040,AT5G10530,AT1G13700,AT4G29180,AT1G49200,AT2G15890,AT1G62980,AT1G61810,AT5G24140,AT3G23290,AT5G23840,AT2G15960,AT2G35370,AT1G05250,AT2G20030,AT4G19770,AT3G15630,AT5G57540,AT1G70890,AT4G28530,AT5G58910,AT1G52190,AT5G14740,AT3G49960,AT4G13420,AT3G59940,AT5G24780,AT5G35790,AT1G15820,AT3G45680,AT1G02570,AT5G60680,AT4G23700,AT2G18050,AT5G25280,AT3G22570,AT4G37070,AT5G53980,AT2G24980,AT1G28330,AT4G25835,AT2G28270,AT5G19790,AT4G19680,AT5G62165,AT5G62330,AT2G29660,AT3G26510,AT4G25830,AT2G03720,AT2G01580,AT1G02205,AT5G59780,AT1G32700,AT5G10970,AT3G47160,AT3G46130,AT1G76890,AT3G46900,AT4G08290,AT2G34180,AT1G03600,AT1G76560,AT1G22330,AT3G05730,AT5G15830,AT5G56870,AT1G30870,AT2G13360,AT3G61900,AT4G20230,AT3G10910,AT1G72610,AT4G33790,AT3G07310,AT1G12560,AT4G30320,AT3G21340,AT2G35990,AT2G43550,AT3G48920,AT2G22980,AT1G70880,AT3G23880,AT5G24930,AT3G23800,AT5G15600,AT1G12900,AT4G17215,AT2G37580,AT3G26740,AT2G04240,AT3G52840,AT5G42500,AT1G80920,AT1G13300,AT1G30380,AT1G71030,AT4G38060,AT3G45700,AT5G42200,AT5G36270,AT2G45170,AT2G44110,AT4G14060,AT3G21055,AT4G21280,AT5G10230,AT5G05500,AT3G25790,AT3G50630,AT4G35720,AT1G15100,AT2G37750,AT2G38820,AT3G61300,AT1G52240,AT1G14700,AT1G33055,AT1G67910,AT3G29430,AT4G11880,AT5G54230,AT1G33670,AT1G13420,AT1G80760,AT5G42600,AT5G25630,AT3G48740,AT2G37820,AT3G47620,AT5G62720,AT1G60140,AT3G48940,AT5G14920,AT4G19160,AT1G80380,AT1G65500,AT4G14270,AT2G18700,AT5G22920,AT3G06850,AT1G61750,AT1G70460,AT4G15290,AT4G16985,AT1G80310,AT1G59500,AT5G52310,AT4G25780,AT3G55310,AT5G06490,AT4G02810,AT4G20070,AT4G31875,AT1G73290,AT3G54590,AT4G28750,AT3G29240,AT1G15380,AT1G31710,AT2G01880,AT1G19900,AT4G33666,AT2G29130,AT3G16560,AT4G19840,AT1G62510,AT5G17860,AT2G34490,AT5G15960,AT3G19710,AT5G51850,AT4G25760,AT4G26010,AT4G30660,AT3G47470,AT1G28670,AT5G37260,AT5G43150,AT5G11540,AT4G05070,AT5G02160,AT5G09440,AT2G34810,AT4G27450,AT5G07570,AT5G45840,AT1G54500,AT2G20260,AT1G18140,AT4G37540,AT5G61250,AT2G13810,AT3G20460,AT1G62770,AT2G20500,AT2G39000,AT2G41970,AT1G54970,AT3G27690,AT3G14850,AT1G63180,AT2G28200,AT4G04640,AT3G21710,AT1G67710,AT4G03210,AT1G61520,AT2G19810,AT3G27170,AT1G14190,AT3G29035,AT4G05180,AT2G33790,AT5G16110,AT1G19660,AT3G15450,AT2G43535,AT4G25220,AT4G26770,AT1G76640,AT4G34410,AT2G44460,AT1G12610,AT5G42380,AT3G23250,AT5G52760,AT1G17420,AT5G26220,AT1G12030,AT2G44840,AT1G72520,AT1G76650,AT4G27654,AT1G80840,AT1G30135,AT1G74930,AT4G33720,AT1G23730,AT2G17660,AT3G01830,AT5G12020,AT1G66500,AT5G52050,AT2G41260,AT3G44260,AT4G29780,AT1G19210,AT5G48850,AT3G53600,AT2G34600,AT3G60140,AT4G24110,AT4G27657,AT1G27730,AT4G24570,AT3G02840,AT3G44860,AT2G46400,AT5G58770,AT2G25460,AT2G25735,AT3G28580,AT2G26150,AT5G12030,AT5G47220,AT4G31800,AT1G73540,AT2G35715,AT5G22250,AT5G17350,AT1G17380,AT4G25470,AT5G45340,AT2G32140,AT3G46230,AT5G66640,AT4G11280,AT1G15010,AT3G10930,AT3G50930,AT2G30020,AT3G61190,AT4G27652,AT5G54740,AT5G51190,AT1G28480,AT1G28370,AT5G44120,AT5G62520,AT2G26530,AT3G55980,AT2G22760,AT4G37710,AT5G20230,AT5G52020,AT5G13220,AT3G05400,AT5G67080,AT3G49580,AT4G24380,AT1G74450,AT2G35290,AT2G02010,AT2G27080,AT3G45960,AT4G27280,AT1G61340,AT2G35930,AT4G28520,AT3G17690,AT2G22880,AT5G57560,AT4G08620,AT1G59860,AT1G19180,AT1G17750,AT5G38700,AT1G35210,AT1G14480,AT1G67000,AT2G41640,AT4G17490,AT1G22810,AT3G56710,AT1G04490,AT1G72930,AT4G23810,AT5G11070,AT2G34930,AT1G35140,AT4G31330,AT4G14450,AT2G39650,AT5G64905,AT3G50060,AT2G46510,AT1G23710,AT1G72450,AT5G57510,AT1G70130,AT1G26730,AT1G18740,AT5G10380,AT1G30370,AT5G61600,AT2G42760,AT1G20510,AT1G53540,AT5G59820,AT2G36220,AT5G42650,AT1G72920,AT1G06160,AT3G25780,AT5G28610,AT1G19380,AT1G58420,AT2G36650,AT1G53885,AT3G16860,AT2G37430,AT3G28340,AT5G10180,AT1G69880,AT5G65300,AT1G72940,AT1G32920,AT5G52750,AT5G18470,AT1G21910,AT2G32030,AT4G25140,AT5G35735,AT3G19580,AT1G66160,AT1G66400,AT4G14680,AT1G20310,AT2G35710,AT4G17500,AT5G49520,AT1G05575,AT2G14290,AT1G63090,AT1G73500,AT5G59550,AT2G30040,AT4G30430,AT5G10695,AT1G20823,AT1G74950,AT1G76600,AT1G64160,AT3G22640,AT4G24350,AT2G22500,AT3G21720,AT3G57450,AT5G54470,AT5G39670,AT5G12340,AT2G47190,AT5G54490,AT1G24140,AT5G22530,AT5G37770,AT2G47950,AT1G06830,AT4G21990,AT2G41100,AT5G47070,AT3G62720,AT4G17615,AT1G32970,AT3G04640,AT5G44350,AT3G08860,AT3G22910,AT2G24850,AT3G25250,AT2G40000,AT3G52450,AT4G36710,AT5G52640,AT5G13790,AT1G75280,AT1G56660,AT5G47230,AT3G45640,AT1G77640,AT5G26920,AT5G04340,AT1G32640,AT1G27820,AT2G31230,AT5G24590,AT4G01250,AT2G45080,AT2G38470,AT2G06050,AT1G69930,AT3G61400,AT2G26380,AT3G18690,AT2G41010,AT3G23170,AT3G46620,AT4G36500,AT3G49530,AT1G69050,AT2G40140,AT3G12580,AT2G28210,AT4G25380,AT4G18280,AT5G67300,AT2G05940,AT5G64660,AT5G66210,AT2G29450,AT1G73080,AT5G05410,AT5G45110,AT3G20590,AT3G59080,AT2G18690,AT2G24600,AT5G66650,AT1G67880,AT5G59490,AT1G08090,AT4G22710,AT1G09070,AT5G19110,AT3G62260,AT3G50610,AT4G21390,AT3G54940,AT1G72900,AT3G56200,AT5G14650,AT2G18210,AT2G33580,AT4G34150,AT2G32190,AT4G25810,AT1G08920,AT1G13260,AT1G04330,AT2G22860,AT2G07675,AT1G07135,AT5G59730,AT3G08720,AT5G19890,AT1G67470,AT3G47540,AT1G19020,AT2G38790,AT2G02120,AT5G14730,AT2G29460,AT3G25760,AT1G75290,AT5G59515,AT3G45970,AT1G78070,AT4G35985,AT1G53870,AT4G17230,AT3G44320,AT2G32020,AT1G68840,AT1G27100,AT1G61890,AT5G02780,AT3G53160,AT4G02200,AT1G54050,AT4G04610,AT3G15210,AT1G16370,AT4G23060,AT2G32210,AT1G28600,AT3G19680,AT5G44060,AT3G47480,AT2G25250,AT5G28630,AT1G57990,AT5G06320,AT5G15120,AT5G64310,AT1G66760,AT3G14200,AT5G24660,AT5G41400,AT5G51440,AT5G22570,AT5G27420,AT3G11820,AT5G06870,AT2G28400,AT1G25400,AT5G14700,AT5G13190,AT3G12520,AT1G17620,AT1G36370,AT3G51450,AT4G12720,AT1G21210,AT3G54200,AT2G29500,AT4G39670,AT4G18950,AT5G64900,AT1G50740,AT2G27310,AT3G27540,AT4G23190,AT5G47910,AT4G33985,AT3G57880,AT1G49570,AT1G60750,AT1G24330,AT5G13700,AT2G45680,AT4G31290,AT3G56880,AT3G23400,AT1G28380,AT5G06730,AT1G72890,AT5G25930,AT1G54870,AT4G33920,AT2G23270,AT3G06890,AT3G55840,AT3G19240,AT1G72240,AT3G21520,AT1G19770,AT4G01950,AT1G14550,AT1G13340,AT1G11960,AT2G27690,AT5G41740,AT1G78280,AT5G02490,AT2G48010,AT5G01040,AT4G17090,AT4G21830,AT1G43910,AT1G35910,AT1G73010,AT3G28210,AT2G20145,AT5G17850,AT2G26390,AT4G08950,AT4G02330,AT2G30810,AT5G63450,AT2G32660,AT5G48570,AT1G27770,AT4G35480,AT2G47550,AT4G20860,AT1G62180,AT2G46240,AT2G29670,AT1G11050,AT3G28180,AT5G26030,AT5G41810,AT1G71695,AT3G26970,AT5G63130,AT5G40460,AT1G09575,AT5G66070,cox2,AT4G29670,AT3G43800,AT1G06710,AT1G05680,AT4G25390,AT1G73490,AT3G55090,AT3G16720,AT3G19970,AT2G07707,AT1G56060,AT5G58120,AT5G54960,AT2G30130,AT3G26830,AT4G09030,AT4G36010,AT1G68620,AT3G15810,AT1G70090,AT3G59740,AT5G24070,AT4G37260,AT1G04770,AT2G41890,AT1G02220,AT1G59910,AT5G06510,AT3G25655,AT4G14365,AT1G74310,AT5G58430,AT1G77120,AT2G44580,AT4G13340,AT5G60350,AT1G71400,AT1G29690,AT5G63790,AT1G51660,AT3G18710,AT4G01870,AT5G35580,AT4G10120,AT1G18290,AT4G39830,AT1G02850,AT1G64980,AT3G46600,AT1G80820,ndhB.1,AT5G19240,AT3G47570,AT4G37370,AT1G13210,AT3G61640,AT2G40270,AT2G44080,AT4G33070,AT5G44730,AT1G66080,AT2G26190,AT2G31880,AT2G41480,AT1G44830,AT1G01140,AT2G15760,AT5G54390,AT1G12200,AT5G49280,AT4G15330,AT4G21680,AT1G68610,AT2G17220,AT3G54150,AT3G05320,AT3G32260,AT2G27500,AT3G56980,AT3G56360,AT4G39640,AT5G22630,AT3G09940,AT3G15530,AT4G18880,AT3G11020,AT5G22540,AT3G11840,AT4G30440,AT1G76470,AT4G00770,AT1G14040,AT1G16670,AT1G60970,AT3G26980,nad6,AT1G33590,AT5G49500,AT5G20240,AT3G60550,AT1G79310,AT1G68690,AT2G17640,AT1G63750,AT4G37610,AT5G11650,AT5G47960,AT1G10560,AT3G11170,AT5G42050,AT1G49230,AT5G06720,AT5G48070,AT1G18570,AT1G51700,AT5G45350,AT3G05950,AT4G14040,AT4G11050,AT4G16370,AT5G40170,AT1G73800,AT3G22840,AT3G24500,AT5G42010,AT3G62150,AT4G25480,AT3G09830,AT2G20560,AT3G09350,AT5G65320,AT1G72950,AT5G37490,AT1G02660,AT3G54810,AT2G02310,AT3G02800,AT5G15130,AT5G25450,ccb206,AT5G63770,AT4G22590,AT3G50760,AT4G20000,AT5G39890 HOEWYK_SE_ROOT_UP Upregulated Se-reponsive genes in root tissue (Table 1A PubmedID:18251864) AT1G76640,AT4G34410,AT2G44460,AT1G12610,AT5G42380,AT3G23250,AT5G52760,AT1G17420,AT5G26220,AT1G12030,AT2G44840,AT1G72520,AT1G76650,AT4G27654,AT1G80840,AT1G30135,AT1G74930,AT4G33720,AT1G23730,AT2G17660,AT3G01830,AT5G12020,AT1G66500,AT5G52050,AT2G41260,AT3G44260,AT4G29780,AT1G19210,AT5G48850,AT3G53600,AT2G34600,AT3G60140,AT4G24110,AT4G27657,AT1G27730,AT4G24570,AT3G02840,AT3G44860,AT2G46400,AT5G58770,AT2G25460,AT2G25735,AT3G28580,AT2G26150,AT5G12030,AT5G47220,AT4G31800,AT1G73540,AT2G35715,AT5G22250,AT5G17350,AT1G17380,AT4G25470,AT5G45340,AT2G32140,AT3G46230,AT5G66640,AT4G11280,AT1G15010,AT3G10930,AT3G50930,AT2G30020,AT3G61190,AT4G27652,AT5G54740,AT5G51190,AT1G28480,AT1G28370,AT5G44120,AT5G62520,AT2G26530,AT3G55980,AT2G22760,AT4G37710,AT5G20230,AT5G52020,AT5G13220,AT3G05400,AT5G67080,AT3G49580,AT4G24380,AT1G74450,AT2G35290,AT2G02010,AT2G27080,AT3G45960,AT4G27280,AT1G61340,AT2G35930,AT4G28520,AT3G17690,AT2G22880,AT5G57560,AT4G08620,AT1G59860,AT1G19180,AT1G17750,AT5G38700,AT1G35210,AT1G14480,AT1G67000,AT2G41640,AT4G17490,AT1G22810,AT3G56710,AT1G04490,AT1G72930,AT4G23810,AT5G11070,AT2G34930,AT1G35140,AT4G31330,AT4G14450,AT2G39650,AT5G64905,AT3G50060,AT2G46510,AT1G23710,AT1G72450,AT5G57510,AT1G70130,AT1G26730,AT1G18740,AT5G10380,AT1G30370,AT5G61600,AT2G42760,AT1G20510,AT1G53540,AT5G59820,AT2G36220,AT5G42650,AT1G72920,AT1G06160,AT3G25780,AT5G28610,AT1G19380,AT1G58420,AT2G36650,AT1G53885,AT3G16860,AT2G37430,AT3G28340,AT5G10180,AT1G69880,AT5G65300,AT1G72940,AT1G32920,AT5G52750,AT5G18470,AT1G21910,AT2G32030,AT4G25140,AT5G35735,AT3G19580,AT1G66160,AT1G66400,AT4G14680,AT1G20310,AT2G35710,AT4G17500,AT5G49520,AT1G05575,AT2G14290,AT1G63090,AT1G73500,AT5G59550,AT2G30040,AT4G30430,AT5G10695,AT1G20823,AT1G74950,AT1G76600,AT1G64160,AT3G22640,AT4G24350,AT2G22500,AT3G21720,AT3G57450,AT5G54470,AT5G39670,AT5G12340,AT2G47190,AT5G54490,AT1G24140,AT5G22530,AT5G37770,AT2G47950,AT1G06830,AT4G21990,AT2G41100,AT5G47070,AT3G62720,AT4G17615,AT1G32970,AT3G04640,AT5G44350,AT3G08860,AT3G22910,AT2G24850,AT3G25250,AT2G40000,AT3G52450,AT4G36710,AT5G52640,AT5G13790,AT1G75280,AT1G56660,AT5G47230,AT3G45640,AT1G77640,AT5G26920,AT5G04340,AT1G32640,AT1G27820,AT2G31230,AT5G24590,AT4G01250,AT2G45080,AT2G38470,AT2G06050,AT1G69930,AT3G61400,AT2G26380,AT3G18690,AT2G41010,AT3G23170,AT3G46620,AT4G36500,AT3G49530,AT1G69050,AT2G40140,AT3G12580,AT2G28210,AT4G25380,AT4G18280,AT5G67300,AT2G05940,AT5G64660,AT5G66210,AT2G29450,AT1G73080,AT5G05410,AT5G45110,AT3G20590,AT3G59080,AT2G18690,AT2G24600,AT5G66650,AT1G67880,AT5G59490,AT1G08090,AT4G22710,AT1G09070,AT5G19110,AT3G62260,AT3G50610,AT4G21390,AT3G54940,AT1G72900,AT3G56200,AT5G14650,AT2G18210,AT2G33580,AT4G34150,AT2G32190,AT4G25810,AT1G08920,AT1G13260,AT1G04330,AT2G22860,AT2G07675,AT1G07135,AT5G59730,AT3G08720,AT5G19890,AT1G67470,AT3G47540,AT1G19020,AT2G38790,AT2G02120,AT5G14730,AT2G29460,AT3G25760,AT1G75290,AT5G59515,AT3G45970,AT1G78070,AT4G35985,AT1G53870,AT4G17230,AT3G44320,AT2G32020,AT1G68840,AT1G27100,AT1G61890,AT5G02780,AT3G53160,AT4G02200,AT1G54050,AT4G04610,AT3G15210,AT1G16370,AT4G23060,AT2G32210,AT1G28600,AT3G19680,AT5G44060,AT3G47480,AT2G25250,AT5G28630,AT1G57990,AT5G06320,AT5G15120,AT5G64310,AT1G66760,AT3G14200,AT5G24660,AT5G41400,AT5G51440,AT5G22570,AT5G27420,AT3G11820,AT5G06870,AT2G28400,AT1G25400,AT5G14700,AT5G13190,AT3G12520,AT1G17620,AT1G36370,AT3G51450,AT4G12720,AT1G21210,AT3G54200,AT2G29500,AT4G39670,AT4G18950,AT5G64900,AT1G50740,AT2G27310,AT3G27540,AT4G23190,AT5G47910,AT4G33985,AT3G57880,AT1G49570,AT1G60750,AT1G24330,AT5G13700,AT2G45680,AT4G31290,AT3G56880,AT3G23400,AT1G28380,AT5G06730,AT1G72890,AT5G25930,AT1G54870,AT4G33920,AT2G23270,AT3G06890,AT3G55840,AT3G19240,AT1G72240,AT3G21520,AT1G19770,AT4G01950,AT1G14550,AT1G13340,AT1G11960,AT2G27690,AT5G41740,AT1G78280,AT5G02490,AT2G48010,AT5G01040,AT4G17090,AT4G21830,AT1G43910,AT1G35910,AT1G73010,AT3G28210,AT2G20145,AT5G17850,AT2G26390,AT4G08950,AT4G02330,AT2G30810,AT5G63450,AT2G32660,AT5G48570,AT1G27770,AT4G35480,AT2G47550,AT4G20860,AT1G62180,AT2G46240,AT2G29670,AT1G11050,AT3G28180,AT5G26030,AT5G41810,AT1G71695,AT3G26970,AT5G63130,AT5G40460,AT1G09575,AT5G66070,cox2,AT4G29670,AT3G43800,AT1G06710,AT1G05680,AT4G25390,AT1G73490,AT3G55090,AT3G16720,AT3G19970,AT2G07707,AT1G56060,AT5G58120,AT5G54960,AT2G30130,AT3G26830,AT4G09030,AT4G36010,AT1G68620,AT3G15810,AT1G70090,AT3G59740,AT5G24070,AT4G37260,AT1G04770,AT2G41890,AT1G02220,AT1G59910,AT5G06510,AT3G25655,AT4G14365,AT1G74310,AT5G58430,AT1G77120,AT2G44580,AT4G13340,AT5G60350,AT1G71400,AT1G29690,AT5G63790,AT1G51660,AT3G18710,AT4G01870,AT5G35580,AT4G10120,AT1G18290,AT4G39830,AT1G02850,AT1G64980,AT3G46600,AT1G80820,ndhB.1,AT5G19240,AT3G47570,AT4G37370,AT1G13210,AT3G61640,AT2G40270,AT2G44080,AT4G33070,AT5G44730,AT1G66080,AT2G26190,AT2G31880,AT2G41480,AT1G44830,AT1G01140,AT2G15760,AT5G54390,AT1G12200,AT5G49280,AT4G15330,AT4G21680,AT1G68610,AT2G17220,AT3G54150,AT3G05320,AT3G32260,AT2G27500,AT3G56980,AT3G56360,AT4G39640,AT5G22630,AT3G09940,AT3G15530,AT4G18880,AT3G11020,AT5G22540,AT3G11840,AT4G30440,AT1G76470,AT4G00770,AT1G14040,AT1G16670,AT1G60970,AT3G26980,nad6,AT1G33590,AT5G49500,AT5G20240,AT3G60550,AT1G79310,AT1G68690,AT2G17640,AT1G63750,AT4G37610,AT5G11650,AT5G47960,AT1G10560,AT3G11170,AT5G42050,AT1G49230,AT5G06720,AT5G48070,AT1G18570,AT1G51700,AT5G45350,AT3G05950,AT4G14040,AT4G11050,AT4G16370,AT5G40170,AT1G73800,AT3G22840,AT3G24500,AT5G42010,AT3G62150,AT4G25480,AT3G09830,AT2G20560,AT3G09350,AT5G65320,AT1G72950,AT5G37490,AT1G02660,AT3G54810,AT2G02310,AT3G02800,AT5G15130,AT5G25450,ccb206,AT5G63770,AT4G22590,AT3G50760,AT4G20000,AT5G39890 PERERA_INSP-5-PTASE/WT_C2_DN Reduced basal expression in InsP 5-ptase plants compared to wild type and C2 (Table S1 PubmedID:18849493) AT2G14610,AT2G26400,AT2G18660,AT4G10500,AT1G75040,AT4G23150,AT5G64000,AT2G43570,AT1G14870,AT4G23310,AT3G57260,AT4G21830,AT4G00700,AT4G04500,AT1G35230,AT4G23140,AT3G47480,AT1G33960,AT3G25010,AT5G60800,AT1G09080,AT5G64510,AT4G11890,AT5G24530,AT3G60540,AT4G21850,AT2G32680,AT3G09940,AT4G29520,AT5G46050,AT5G52740,AT3G22600,AT1G77510,AT2G04430,AT1G66960,AT2G30770,AT5G55450,AT4G25000,AT4G21120,AT2G30140,AT5G60950,AT1G51890,AT1G61780,AT4G16660 PERERA_INSP-5-PTASE/WT_C2_UP Increased basal expression in InsP 5-ptase plants compared to wild type and C2 (Table S2 PubmedID:18849493) AT5G05410,AT3G55940,AT4G01080,AT4G36010,AT4G17550,AT4G35300,AT2G36220,AT1G09350,AT4G23600,AT1G56600,AT1G27200,AT1G62570,AT3G24520,AT1G60190,AT1G76790,AT1G51090,AT3G50970,AT5G17170,AT2G21940,AT2G45850 PERERA_DROUGHT_WT_C2_UP Up regulated (> 2 fold) with drought in WT and C2 (Table S3 PubmedID:18849493) AT2G36770,AT3G60140,AT2G42560,AT4G19810,AT5G44310,AT5G66780,AT1G01480,AT4G31830,AT1G80160,AT2G37770,AT5G05220,AT2G01890,AT3G57020,AT1G24600,AT5G64310,AT3G15760,AT5G11520,AT3G46230,AT5G51760,AT2G35300,AT2G36750,AT2G29380,AT5G06370,AT5G51680,AT2G22470,AT3G49160,AT4G00440,AT2G03760,AT2G33080,AT5G27520,AT1G44800,AT3G17810,AT5G19855,AT5G13360,AT4G20320,AT5G67300,AT2G29450,AT3G05890,AT5G15240,AT3G46660,AT4G21320,AT4G10040,AT4G39140,AT3G58570,AT1G53580,AT3G09350,AT5G13330 PERERA_DROUGHT_INSP-5-PTASE_UP Up regulated with drought (>2 fold) in InsP 5-ptase plants (Table S4 PubmedID:18849493) AT5G52390,AT1G78000,AT1G28400,AT4G21910 PERERA_DROUGHT_WT_C2_DN Down regulated (> 2 fold) with drought in WT and C2 (Table S5 PubmedID:18849493) AT5G60800,AT4G14540,AT5G42070,AT4G12390,AT1G68590,AT1G65190,AT1G29910,AT3G15530,AT2G41950,AT1G33960,AT2G07180,AT2G04450,AT1G29430,AT4G23400,AT3G48730,AT5G17870,AT5G53880,AT4G29060,AT2G32400,AT1G21590,AT3G18920,AT1G13750,AT4G04890,AT5G62840,AT1G05570,AT3G19400,AT3G59760,AT4G34090,AT5G10380,AT1G23360,AT1G67090,AT2G30150,AT4G09550,AT3G24570,AT3G02180,AT1G50900,AT3G62110,AT2G37860,AT3G51450,AT5G18170,AT5G61660,AT5G44520,AT1G21050,AT2G17830,AT5G16150,AT1G11440,AT1G55670,AT4G36150 PERERA_DROUGHT_INSP-5-PTASE_DN Down regulated with drought (>2 fold) in InsP 5-ptase plants (Table S6 PubmedID:18849493) AT4G16260,AT3G26210,AT5G26920,AT1G17420,AT1G01560,AT1G01390,AT4G02420,AT1G19450,AT1G18740,AT1G18010,AT3G15570,AT3G46600,AT2G39650,AT4G32800,AT5G58120,AT5G04930,AT4G27652,AT5G14120,AT5G37770,AT2G22500,AT4G23820,AT1G20823 PERERA_DROUGHT_UP Commonly up regulated (> 2fold) with drought (Table S7 PubmedID:18849493) AT1G52690,AT5G52300,AT2G47770,AT5G59310,AT5G59220,AT5G66400,AT1G22990,AT4G33150,AT5G06760,AT4G15910,AT5G01300,AT1G64110,AT3G53980,AT3G22840,AT3G12580,AT1G77120,AT3G57520,AT5G22460,AT2G41190,AT1G02310,AT5G50360,AT2G21590,AT1G69260,AT2G21820,AT4G24000,AT2G37870,AT1G64660,AT3G13672,AT5G53870,AT5G13170,AT1G68500,AT4G17030,AT1G17020,AT2G29460,AT5G15190,AT1G17870,AT5G37540,AT1G07430,AT1G52890,AT1G16850,AT4G33905,AT3G28007 PERERA_DROUGHT_DN Commonly down regulated (> 2 fold) with drought (161 transcripts) (Table S8 PubmedID:18849493) AT3G27690,AT5G03350,AT5G22580,AT1G72610,AT5G16030,AT5G59670,AT1G10340,AT5G63180,AT1G65490,AT4G04540,AT4G23290,AT1G73600,AT3G01500,AT4G39940,AT3G45860,AT5G35490,AT1G29660,AT1G11330,AT4G24570,AT3G08920,AT4G24340,AT3G04210,AT1G76100,AT5G14740,AT1G19150,AT4G31500,AT5G22570,AT4G13770,AT2G17040,AT3G23550,AT1G15820,AT1G12900,AT1G04530,AT2G23200,AT4G21280,AT5G49630,AT2G42690,AT3G14840,AT4G26530,AT5G39020,AT3G48720,AT1G78460,AT3G15850,AT3G28040,AT4G25080 DONGEN_OXGEN_0.5H_UP Upregulated significantly within 0.5 hours under 1, 4 or 8% oxygen respectively as compared to 21% oxgen (p<0.05). (File S1 PubmedID:18660497) AT3G27220,LBD41,AT5G15120,AT3G10040,AT4G33560,ADH1,AT4G10270,AT4G33070,SRO5,AT5G44730,AT4G24110,CYP707A3,NIP2;1,AT5G10040,AT3G23170,AT5G39890,HRE1,HB1,AT4G14980,AT3G11580 DONGEN_OXGEN_48H_UP Upregulated significantly within 48 hours under 1, 4 or 8% oxygen respectively as compared to 21% oxgen (p<0.05). (File S1-C PubmedID:18660497) HRE2,AT3G29970,AT4G14980,ASP2,SUS1,AT4G36680,SRO5,TIL,AT5G44730,AT5G39890,AT5G15120,AT5G10040,AT5G05790,AT3G55720,SUS4,AT4G33560,AT4G33070,AT4G24110,AT4G10270,AT1G66620,AT3G27220,ICL,LBD41,AT3G03270,CML38,ALAAT1,AT1G43800,PMEPCRA,LCR67,AT1G59860,HB1,AT1G77170,AT2G17850,ADH1,ACO1,AT2G47710,NIP2;1 DONGEN_OXGEN_2H_UP Upregulated significantly within 2 hours under 1, 4 or 8% oxygen respectively as compared to 21% oxgen (p<0.05). (File 2 PubmedID:18660497) AT2G47560,HRE2,AT4G17260,AT4G17670,AT4G14980,PHI-1,AT5G11090,ASP2,SUS1,AT4G37240,AT5G26200,CIPK25,AT5G66985,SRO5,TIL,PDC2,ATTPPA,AT5G51190,AT5G49120,RBOHD,ERF2,AT5G47060,CYP707A3,AT5G44730,AT5G44260,ATS,AT5G42200,AT5G39890,AILP1,AT5G19120,AT5G15120,ZIF1,APT5,AT5G10040,AT5G09620,AT5G07580,AT5G05790,AT5G02580,FHL,PP2-A13,AT3G60520,GAUT15,MES10,SUS4,AT4G40070,AT4G37710,AT4G34950,OST1,AT4G33560,GLB3,PFK6,AT4G33070,AT4G31020,AT4G30380,GAE1,AT4G29190,AT4G27450,OPT6,AT4G26490,PFK3,AT4G24110,ACR7,AT4G19980,AT4G18280,AT4G01330,AT4G10270,AT1G20270,AT1G17830,WOX14,AT1G16840,JAZ8,AT3G12150,AT3G13620,AT3G19680,PUX1,AT3G27220,MYB305,AT3G28480,AT3G25410,ETR2,AT3G23170,JAZ3,AT3G27770,LBD41,AT3G02555,AT3G03020,AT3G11930,AT3G10910,AT3G03270,AT3G10040,AT3G07310,AT3G11580,GID1A,AT1G15670,C/VIF1,PP2-A11,CML38,AT1G71980,HRE1,AT1G10990,AT1G19530,AT1G19330,ALAAT1,AT1G43800,AT1G26730,EXPA10,SBH2,AT1G33055,PMEPCRA,AT1G74940,TIFY10B,PME1,AT1G72940,AT1G28760,CP5,AT1G23850,HB1,AT2G31390,AGL44,AT2G04480,LBD40,AT1G77170,UKL3,AT1G61340,AT1G03610,AT2G17850,ADH1,MEE14,TET2,ACO1,AT2G18670,ERO2,CYP94C1,AT2G47950,AT2G47720,AT2G46080,HXK2,AT2G34400,NIP2;1,AT2G02620,ARL,AT2G39870,WRKY21 MU_ACID-SYNTHETIC-GENE_LEC1-OXI_UP Upregulated fatty acid synthetic genes in LEC1-Oxi plants (Table S1 PubmedID:18689444) AT3G01570,AT3G27660,AT4G25140,AT5G40420,AT4G34520,AT5G51210,AT3G18570,AT5G55240,AT1G65880,AT5G27200,AT1G71691,AT5G08460,AT5G22810,AT3G02630,AT5G16240,AT3G23470,AT3G05020,AT5G15530,AT3G16950,AT5G64080,AT1G28640,AT2G46210,AT2G27360,AT5G08415,AT1G52670,AT3G25110,AT5G35360,AT2G38040,AT2G29980,AT1G62610,AT5G27630,AT3G16170,AT2G30200,AT2G05990,AT1G74960,AT5G02100,AT2G43360,AT2G41540,AT3G12120,AT1G09430,AT1G01090,AT2G38180,AT2G43710,AT2G34590,AT1G03090,AT1G80950,AT3G06850,AT4G38570,AT5G49190,AT2G28420,AT1G78500,AT1G22170,AT4G15210,AT1G09420,AT1G60730,AT1G80160,AT5G52920,AT5G04380,AT5G14500,AT1G54100,AT5G66460,AT5G13690,AT5G64370,AT4G31590,AT1G09510,AT5G56590,AT1G66270,AT2G44470,AT1G04920,AT1G12230,AT1G11840,AT1G23800,AT1G80290,AT5G58730,AT5G61450,AT2G25980,AT5G65750,AT2G18560,AT1G60710,AT1G60690,AT4G25900,AT1G03880,AT4G27170,AT4G27160,AT3G22640,AT1G03890,AT4G28520,AT4G27140,AT4G27150,AT2G28490,AT5G44120,AT4G36700,AT5G54740,AT1G62500,AT5G19440,AT2G41070,AT5G07500,AT3G44460,AT4G33280,AT1G15910,AT4G31060,AT1G77920,AT3G57080,AT3G12550,AT5G15020,AT5G22220,AT5G11260,AT2G13690,AT4G34590,AT3G01320,AT3G61260,AT3G42670,AT3G24340,AT5G23570,AT5G54930,AT3G06400,AT1G46264,AT1G32130,AT3G48760,AT1G10200,AT3G12480,AT5G20360,AT5G44080,AT1G08620,AT2G02470,AT2G46020,AT1G09770,AT4G20280,AT5G06810,AT1G56090,AT1G21970,AT4G26740,AT5G07190,AT5G47670,AT5G03800,AT3G24650,AT3G26790,AT5G23940,AT5G64530,AT4G16845,AT5G13710,AT2G25170,AT5G54370,AT2G34700,AT3G54330,AT1G18100,AT5G13790,AT5G10140,AT5G10510,AT5G67320,AT5G65530,AT5G60760,AT3G10200,AT2G02780,AT1G68510,AT5G45160,AT5G44700,AT3G15260,AT5G47800,AT3G20500,AT3G46920,AT1G18840,AT3G18750,AT1G31930,AT1G73980,AT3G54170,AT4G17640,AT5G58000,AT1G35670,AT4G14350,AT5G08590,AT1G05500,AT4G02630,AT5G50180,AT2G21160,AT1G14280,AT4G24190,AT1G69220,AT3G15970,AT1G06700,AT5G24010,AT2G33990,AT4G35310,AT1G63430,AT3G12200,AT5G62390,AT5G25510,AT3G14270,AT1G79690,AT2G24420,AT1G48050,AT2G40040,AT3G12670,AT5G14610,AT5G57970,AT1G25350,AT4G20910,AT1G20370,AT1G17130,AT5G04600,AT3G54940,AT3G12203,AT5G09640,AT1G48470,AT1G62290,AT5G14780,AT1G50110,AT1G27120,AT1G21750,AT1G17860,AT5G43600,AT4G36190,AT4G39660,AT4G20850,AT1G12550,AT1G30000,AT2G34560,AT2G22740,AT1G08660,AT5G67530,AT5G62500,AT4G27180,AT1G52080,AT1G16590,AT1G64330,AT5G59210,AT5G60210,AT5G47820,AT5G08080,AT5G02370,AT3G61650,AT2G01910,AT5G55230,AT5G48460,AT1G18450,AT1G17810,AT1G73190,AT4G16160,AT1G15150,AT2G23360,AT2G47600,AT5G41610,AT1G04120,AT1G75850,AT1G72150,AT5G41220,AT4G02050,AT1G75370,AT1G79610,AT3G21090,AT5G16880,AT1G22710,AT4G39390,AT3G18480,AT5G14030,AT3G51310,AT1G16460,AT3G54540,AT2G41700,AT2G30070,AT1G22530,AT3G27530,AT1G55840,AT5G62800,AT1G62710,AT5G63700,AT2G30580,AT5G63760,AT5G56150,AT3G16090,AT1G13570,AT5G08750,AT5G64760,AT3G19910,AT1G51710,AT2G05840,AT2G14835,AT4G29420,AT1G09100,AT5G07200,AT1G05160,AT3G23050,AT3G20770,AT4G05160,AT4G28365,AT5G44360,AT5G43860,AT5G04660,AT1G26410,AT1G78490,AT5G44380,AT4G36270,AT2G23180,AT5G24910,AT4G37200,AT1G48130,AT1G47540,AT4G25980,AT2G43520,AT4G32770,AT1G75280,AT3G20560,AT1G71695,AT4G31760,AT4G21960,AT5G60640,AT4G37000,AT1G78370,AT1G19230,AT3G47950,AT2G34870,AT2G27380,AT5G59170,AT5G43770,AT1G48280,AT2G34670,AT3G63040,AT1G54860,AT1G65090,AT1G29680,AT2G33520,AT5G08360,AT5G24130,AT5G22580,AT1G68470,AT3G23090,AT4G33750,AT5G25470,AT2G01770,AT1G12080,AT2G22660,AT5G52230,AT1G07040,AT2G45900,AT3G11620,AT1G71690,AT2G25280,AT1G33700,AT3G20260,AT1G31150,AT1G47330,AT4G32290,AT1G12830,AT1G10410,AT3G13510,AT5G25770,AT5G49820,AT4G39900,AT5G05480,AT1G03270,AT5G06610,AT4G22850,AT1G65020,AT5G48500,AT5G05230,AT1G63420,AT1G22060,AT1G12120,AT2G38370,AT4G16650,AT1G02330,AT5G65910,AT5G13970,AT3G54190,AT3G21400,AT2G24440,AT4G27120,AT4G25680,AT5G40450,AT3G52070,AT2G18770,AT3G12140,AT3G61670,AT1G51745,AT4G37300,AT3G49490,AT1G12650,AT1G76270,AT1G53460,AT1G76660,AT5G57410,AT1G68160,AT4G30630,AT4G25210,AT1G34320,AT3G29180,AT4G36630,AT2G03350,AT4G24790,AT5G35080,AT5G04830,AT1G61620,AT1G67230,AT1G65010,AT1G04560,AT5G50600,AT4G03050,AT1G04660,AT4G10020,AT5G50770,AT1G28030,AT4G19380,AT2G06720,AT2G41290,AT1G23010,AT1G35190,AT4G13840,AT5G39220,AT5G09300,AT1G68170,AT1G78970,AT4G02340,AT4G11820,AT1G05350,AT5G63620,AT3G05910,AT1G76090,AT5G04900,AT4G36860,AT3G03330,AT1G53280,AT3G23980,AT1G31480,AT1G23120,AT1G71040,AT5G47680,AT1G15160,AT1G66280,AT2G18570,AT2G40030,AT3G23480,AT3G31955,AT4G00380,AT4G32490,AT4G36195,AT4G36280,AT5G05620,AT5G35590,AT5G41240,AT5G50700,AT3G42720 MU_ACID-SYNTHETIC-GENE_LEC1-OXI_DN Downregulated fatty acid synthetic genes in LEC1-Oxi plants (Table S2 PubmedID:18689444) AT5G55450,AT1G33811,AT2G38540,AT2G46720,AT1G04640,AT4G36810,AT2G26930,AT3G51600,AT1G10030,AT2G18730,AT1G22400,AT4G27600,AT3G04790,AT1G77060,AT5G64380,AT3G54090,AT1G04420,AT4G33030,AT5G58330,AT4G03210,AT3G06483,AT5G12890,AT2G29260,AT1G67810,AT2G18230,AT2G37660,AT4G28210,AT4G26500,AT4G31850,AT1G49510,AT3G29230,AT1G01970,AT2G17033,AT5G20250,AT1G08610,AT3G47650,AT2G33430,AT5G07020,AT3G07570,AT2G45740,AT2G38210,AT4G29080,AT1G72430,AT1G76520,AT5G20630,AT1G76080,AT1G06830,AT1G19200,AT4G34190,AT4G30650,AT5G06290,AT3G15360,AT1G29390,AT4G33730,AT5G51100,AT1G20030,AT5G35630,AT4G09010,AT3G45600,AT2G04030,AT2G02100,AT1G76100,AT2G46650,AT2G20270,AT5G54290,AT1G64900,AT3G53130,AT4G28750,AT2G22650,AT1G20020,AT3G51790,AT2G04040,AT4G33520,AT3G08920,AT1G23090,AT2G29650,AT3G54900,AT2G40300,AT2G38270,AT1G18320,AT4G19690,AT4G38380,AT4G04750,AT4G21120,AT5G11690,AT3G20240,AT3G51870,AT1G64890,AT5G24650,AT1G28230,AT1G79710,AT3G10260,AT4G25450,AT3G59980,AT5G63310,AT3G06950,AT4G33760,AT2G39140,AT3G53900,AT3G24030,AT5G06210,AT2G24590,AT5G05920,AT3G52150,AT1G01210,AT1G70200,AT1G49980,AT2G30320,AT2G35500,AT3G19710,AT2G24090,AT5G17870,AT2G44650,AT1G35680,AT1G48350,AT3G13470,AT3G63190,AT5G15520,AT1G68590,AT3G59650,AT1G78630,AT1G32470,AT5G35100,AT3G18680,AT3G44890,AT1G16790,AT5G20720,AT5G30510,AT4G25890,AT1G26910,AT5G40950,AT5G48760,AT1G05190,AT5G14320,AT4G01310,AT1G04480,AT5G64140,AT1G11860,AT3G04400,AT1G36390,AT1G18170,AT3G58700,AT5G47050,AT5G13730,AT4G38160,AT3G13180,AT1G25560,AT4G02990,AT5G15210,AT5G35210,AT2G34640,AT1G10170,AT1G25470,AT2G42360,AT4G28270,AT1G69330,AT1G01030,AT4G32915,AT1G55805,AT3G09210,AT1G31160,AT3G13700,AT1G14270,AT5G49610,AT3G24590,AT1G18600,AT2G24250,AT4G26840,AT5G51540,AT1G12410,AT3G15650,AT1G56050,AT4G02790,AT1G22700,AT3G12080,AT1G02910,AT3G62030,AT3G47450,AT3G03990,AT5G07370,AT2G46880,AT5G63980,AT3G05990,AT2G39670,AT1G60230,AT1G23360,AT1G49650,AT2G20520,AT3G47490,AT3G02450,AT2G44920,AT5G45930,AT1G45474,AT3G14930,AT4G21280,AT1G14450,AT2G40490,AT1G45230,AT4G20130,AT2G14880,AT4G13235,AT1G50000,AT3G08640,AT4G34950,AT5G18660,AT1G01070,AT5G14120,AT1G64770,AT5G58260,AT3G63160,AT2G29180,AT3G16660,AT3G57160,AT1G62780,AT2G44640,AT2G47010,AT1G15980,AT3G15110,AT2G41950,AT2G21280,AT5G42765,AT3G07910,AT5G17340,AT3G56910,AT3G50685,AT1G08640,AT1G21500,AT1G69230,AT2G35750,AT2G32380,AT3G04860,AT5G17670,AT4G28290,AT5G24313,AT3G17350,AT1G34245,AT1G73120,AT5G62140,AT1G26180,AT1G67660,AT4G24750,AT2G27775,AT1G22270,AT1G11200,AT5G08400,AT2G20020,AT2G26340,AT5G22340,AT1G12845,AT1G04070,AT5G42850,AT1G27030,AT5G11000,AT5G44650,AT1G16170,AT1G08390,AT1G19240,AT5G13100,AT3G56010,AT1G52910,AT1G02475,AT4G29750,AT2G38230,AT3G10110,AT3G10280,AT3G13710,AT4G07950,AT5G35220 CHOY_7DSEEDLINGS/WT-SEEDLING_DN The lowest ratios of transcript amounts (Affymetrix values) in ged1 7-day-old seedlings relative to wild-type Ws seedlings (Table S2 PubmedID:18931353) AT5G44120,AT4G27150,AT3G15670,AT1G48130,AT2G41260,AT3G51810,AT4G28520,AT4G21020,AT5G54740,AT1G75830,AT3G12960,AT5G40420,AT4G09610,AT4G26740,AT2G21490,AT2G35300,AT4G27160,AT1G27470,AT3G27660,AT3G19920,AT2G23240,AT3G22500,AT3G22640,AT1G32560,AT3G54940,AT4G25140,AT2G36640,AT3G58450,AT1G54870,AT4G09600,AT4G16160,AT2G41280,AT1G73190,AT5G44310,AT5G50600,AT5G66780,AT1G05510,AT2G02120,AT3G02480,AT3G21380,AT4G27140,AT3G53040,AT2G40170,AT3G22490,AT3G01570,AT1G72100,AT1G12130,AT2G28490,AT1G03880,AT4G10020 MIWA_SOL2-MUTANT_GENECHIP_UP Upregulated genes in sol2 mutant in GeneChip analysis (Data 2 PubmedID:18854335) AT3G31415,AT4G01920,AT5G43030,AT3G44400,AT1G23960,AT4G05050,AT3G44430,AT4G08110,AT3G47220,AT1G61500,AT4G15390,AT3G54420,AT4G12330,AT4G01910,AT1G19250,AT2G43660,AT2G25450,AT5G17890,AT3G46490,AT2G26820,AT5G23840,AT1G58270,AT1G52710,AT5G55790,AT1G43040,AT3G29035,AT1G43140,AT3G47680,AT1G50520,AT5G22530,AT1G62510,AT1G21130,AT1G62860,AT5G62165,AT4G00955,AT1G62480,AT5G37990,AT2G41100,AT1G52260,AT1G62500,AT5G24660,AT5G43040,AT5G62340,AT4G22710,AT5G42240,AT5G35450,AT3G26290,AT5G54020,AT1G60750,AT1G05340,AT5G45840,AT1G68050,AT3G27610,AT5G17870,AT4G02540,AT1G65310,AT2G43535,AT5G22860,AT3G27360,AT5G10210,AT5G54040,AT5G37890,AT5G60450,AT3G47210,AT4G10500,AT3G27200,AT4G01930,AT1G61180,AT2G41650,AT3G46270,AT5G63760,AT4G13440,AT3G62460,AT1G24996,AT1G24793 MIWA_SOL2-MUTANT_GENECHIP_DN Downregulated genes in sol2 mutant in GeneChip analysis (Data 3 PubmedID:18854335) AT1G10880,AT5G06500,AT1G33320,AT1G51990,AT1G53990,AT5G19100,AT5G20820,AT5G25920,AT1G52690,AT3G48740,AT1G27540,AT5G24140,AT4G01390,AT2G44370,AT1G29180,AT5G22580,AT1G44318,AT1G47400,AT1G17300,AT3G60980,AT3G28290,AT1G26530,AT2G28560,AT2G24560,AT1G15260,AT5G37210,AT3G45070,AT5G17220 BRANCO-PRICE_2HS_IP_UP Increase exclusively after 2HS_IP (Table S4 PubmedID:18665916) AT1G57980,AT5G57655,AT5G54490,AT5G54630,AT5G51460,AT5G49730,AT5G47060,AT5G46710,AT5G24120,AT5G19240,AT5G18670,AT5G17300,AT3G61060,AT3G52060,AT3G47340,AT3G46600,AT4G38470,AT4G31730,AT4G30440,AT4G09570,AT4G04040,AT4G00490,AT3G12150,AT1G66130,AT1G66180,AT3G18890,AT3G13750,AT3G15210,AT2G38640,AT3G17770,AT3G14620,AT3G15450,AT3G02555,AT3G07350,AT3G07310,AT3G03470,AT1G13300,AT1G01550,AT1G63180,AT1G66330,AT1G70520,AT1G72430,AT1G26560,AT1G26770,AT1G18460,AT1G11260,AT1G06570,AT2G22420,AT1G03220,AT1G77210,AT1G62200,AT2G20670,AT2G32150,AT2G19580,AT2G29320,AT2G19810,AT2G26830,AT2G44130,AT1G03230,AT1G57990,AT2G44140,AT5G49740 BRANCO-PRICE_9HS_IP_UP Increase exclusively after 9HS_IP (Table S4 PubmedID:18665916) AT2G33150,AT4G17615,AT4G15470,AT4G15610,AT4G16146,AT4G14365,AT4G17090,AT4G15490,AT4G17370,AT1G28330,AT1G30260,AT1G26230,AT5G19430,AT5G08380,AT5G20010,AT4G36410,AT4G36530,AT5G17650,AT5G15860,AT5G14730,AT5G27600,AT5G27280,AT5G26710,AT5G25930,AT5G66880,AT5G66930,AT5G64240,AT5G64250,AT5G63680,AT5G63780,AT5G62740,AT5G62200,AT5G62150,AT5G61820,AT5G61510,AT5G59420,AT5G58800,AT5G57560,AT5G56630,AT5G54930,AT5G53350,AT5G51820,AT5G51830,AT5G51980,AT5G51050,AT5G48570,AT5G48300,AT5G48250,AT5G47120,AT5G44070,AT5G43430,AT5G42740,AT5G40690,AT5G39050,AT5G37260,AT5G35735,AT5G18240,AT5G17310,AT5G17380,AT5G13730,AT5G13240,AT5G13360,AT5G11670,AT5G08570,AT5G07460,AT5G06690,AT5G04720,AT5G03720,AT5G03240,AT5G03350,AT3G62770,AT3G62550,AT3G61220,AT3G60520,AT3G59920,AT3G59300,AT3G59350,AT3G55450,AT3G53620,AT3G53230,AT3G51130,AT3G50950,AT3G48530,AT3G48880,AT3G47550,AT3G47160,AT3G46970,AT3G46670,AT3G45140,AT3G44190,AT3G43230,AT4G39080,AT4G35790,AT4G33950,AT4G34120,AT4G34090,AT4G33920,AT4G33510,AT4G33030,AT4G32690,AT4G29070,AT4G27410,AT4G26130,AT4G26160,AT4G24740,AT4G23493,AT4G21990,AT4G21580,AT4G21470,AT4G20860,AT4G19860,AT4G19880,AT4G19390,AT4G18880,AT4G18810,AT4G18280,AT4G13640,AT4G18010,AT4G13510,AT4G13180,AT4G12400,AT4G11600,AT4G11280,AT4G10120,AT4G09150,AT4G02940,AT4G02640,AT4G02340,AT4G01870,AT4G00500,AT1G17860,AT1G22070,AT1G33970,AT1G13750,AT1G16840,AT3G12350,AT3G12580,AT1G72060,AT3G10985,AT1G75270,AT1G75280,AT1G31580,AT1G31480,AT1G66080,AT1G66160,AT3G22240,AT3G52180,AT3G19240,AT3G27310,AT3G13110,AT3G27880,AT3G22060,AT3G15570,AT3G30775,AT1G49620,AT3G25760,AT3G18500,AT3G27110,AT3G26740,AT3G23280,AT3G20810,AT3G14690,AT3G17790,AT3G29090,AT3G15630,AT3G02580,AT3G03020,AT3G08720,AT3G11930,AT3G11820,AT3G10500,AT3G10420,AT3G10410,AT3G07370,AT3G09350,AT3G11660,AT3G01670,AT3G03640,AT3G07720,AT1G01470,AT1G19020,AT1G77770,AT1G71130,AT1G66260,AT1G72800,AT1G76680,AT1G76700,AT1G72680,AT1G76570,AT1G76590,AT1G67910,AT1G73655,AT1G73240,AT1G36370,AT1G80480,AT1G70590,AT1G63840,AT1G69680,AT1G69840,AT1G53310,AT1G43670,AT1G21450,AT1G12200,AT1G75340,AT1G20110,AT1G79690,AT1G28380,AT1G01820,AT1G01140,AT1G27760,AT1G18470,AT1G16180,AT1G50600,AT1G80670,AT1G72890,AT1G11310,AT1G21680,AT1G17180,AT1G17170,AT1G34210,AT1G15340,AT1G13990,AT1G13930,AT1G06430,AT1G06460,AT1G65020,AT1G79380,AT1G78600,AT1G54050,AT1G05560,AT2G28720,AT2G21250,AT2G04460,AT2G36390,AT2G36460,AT2G36330,AT2G36220,AT2G21130,AT2G31200,AT1G70420,AT1G05340,AT1G09060,AT1G62180,AT1G22930,AT2G17280,AT1G67360,AT1G04080,AT1G03850,AT2G22690,AT2G16630,AT2G46550,AT2G15960,AT2G15695,AT2G15830,AT2G14260,AT2G27260,AT2G32240,AT2G40100,AT2G37470,AT2G37970,AT2G02390,AT2G02230,AT2G29490,AT2G29500,AT2G29420,AT2G26990,AT2G14680,AT2G47730,AT2G30040,AT2G25950,AT2G45740,AT2G38410,AT2G41100,AT2G41430,AT2G31040,AT2G37540,AT2G30250,AT2G02570,AT2G30140,AT2G40080,AT2G30490,AT2G02800,AT1G34220,AT1G72070,AT1G76690,AT2G21260,AT3G17800,AT3G25770,AT3G50960,AT4G34131,AT4G39090,AT5G13370,AT5G20020,AT5G63790,AT4G34135 BRANCO-PRICE_2HS_IP_9HS_IP_UP Increase in both 2HS_IP and 9HS_IP (Table S4 PubmedID:18665916) AT4G17260,AT4G17670,AT1G35140,AT1G26270,AT5G11090,AT5G19550,AT5G20830,AT5G10695,AT5G20150,AT5G20230,AT5G20140,AT5G26200,AT5G25630,AT5G66985,AT5G65640,AT5G64260,AT5G61440,AT5G58430,AT5G58070,AT5G56870,AT5G54130,AT5G52640,AT5G51440,AT5G48540,AT5G47910,AT5G44730,AT5G43450,AT5G42760,AT5G42200,AT5G42050,AT5G41080,AT5G39890,AT5G38510,AT5G24590,AT5G19140,AT5G19120,AT5G15120,AT5G10470,AT5G06860,AT5G06320,AT5G05410,AT5G01220,AT3G61310,AT3G56400,AT3G55980,AT3G52400,AT3G50440,AT3G47420,AT3G47640,AT3G45300,AT3G43540,AT4G39675,AT4G35750,AT4G34150,AT4G33560,AT4G33420,AT4G32840,AT4G30280,AT4G27470,AT4G27450,AT4G27260,AT4G25810,AT4G23600,AT4G22690,AT4G20830,AT4G19960,AT4G10790,AT4G03960,AT4G01250,AT1G25550,AT2G33590,AT4G10270,AT1G20270,AT3G06170,AT3G52190,AT3G18290,AT3G27220,AT1G23550,AT1G69040,AT3G26510,AT3G13310,AT3G29240,AT3G28480,AT3G23150,AT3G23170,AT3G17790,AT3G17860,AT3G22370,AT3G22420,AT3G02550,AT3G03270,AT3G10020,AT3G01290,AT3G05120,AT1G15670,AT1G47960,AT1G63090,AT1G76600,AT1G70530,AT1G70560,AT1G72360,AT1G19530,AT1G17290,AT1G21410,AT1G04770,AT1G12780,AT1G07870,AT1G21100,AT1G33055,AT1G18400,AT1G11580,AT1G35670,AT1G78070,AT1G75020,AT1G74940,AT1G53840,AT1G68670,AT1G72940,AT1G28760,AT1G14870,AT1G79510,AT2G16060,AT1G03090,AT1G78510,AT1G54100,AT1G05575,AT2G31390,AT2G14170,AT2G31750,AT1G31130,AT2G36970,AT2G36950,AT2G03760,AT1G78850,AT1G10370,AT1G10140,AT1G55810,AT2G17730,AT1G08930,AT1G09070,AT1G03610,AT2G17850,AT1G23140,AT1G77120,AT1G62570,AT2G36690,AT2G46500,AT2G15890,AT2G32190,AT2G25735,AT2G19860,AT2G37750,AT2G23810,AT2G40000,AT2G26660,AT1G14880,AT1G72330,AT1G78860,AT2G32210,AT4G22710 LI_NFYA5_UP Higher expression with expression changes (pfp<0.05) in NFYA5 overexpression plants expression with expression changes (pfp<0.05) in NFYA5 overexpression (Table S1 PubmedID:18682547) AT1G17170,AT1G17180,AT1G26380,AT1G54160,AT1G78340,AT1G78370,AT2G30750,AT2G37870,AT2G40670,AT2G41480,AT2G42530,AT2G42540,AT2G43570,AT3G49580,AT3G53400,AT4G15210,AT4G23600,AT5G38900,AT5G59310,AT5G59320,AT5G65080,ATCG00600,ATCG00660,ATCG01000,ATCG01130 LI_NFYA5_DN Lower expression with expression changes (pfp<0.05) in NFYA5 overexpression (Table S1 PubmedID:18682547) AT1G05250,AT1G05260,AT1G10770,AT1G13300,AT1G13670,AT1G19530,AT1G29090,AT1G29500,AT1G49860,AT1G51830,AT1G61590,AT1G64660,AT1G69490,AT1G70850,AT1G73330,AT1G76410,AT1G78290,AT1G79360,AT1G79840,AT1G80160,AT1G80240,AT2G01520,AT2G01530,AT2G01900,AT2G14580,AT2G17880,AT2G21540,AT2G22860,AT2G31980,AT2G32300,AT2G33815,AT2G34180,AT2G34390,AT2G35270,AT2G35710,AT2G37750,AT2G41260,AT2G44380,AT2G45220,AT2G46740,AT3G02620,AT3G09220,AT3G11370,AT3G13700,AT3G14770,AT3G15440,AT3G16150,AT3G18170,AT3G20210,AT3G21370,AT3G21720,AT3G45730,AT3G46270,AT3G48580,AT3G49160,AT3G50970,AT3G53250,AT3G59900,AT3G62680,AT4G00680,AT4G01140,AT4G02270,AT4G04990,AT4G08300,AT4G12550,AT4G14060,AT4G14130,AT4G18510,AT4G25820,AT4G26010,AT4G26260,AT4G27260,AT4G28520,AT4G28530,AT4G30670,AT4G32280,AT4G37220,AT4G39675,AT4G40090,AT5G02540,AT5G02580,AT5G04340,AT5G04960,AT5G05500,AT5G10040,AT5G12050,AT5G19890,AT5G23220,AT5G24410,AT5G25110,AT5G39520,AT5G43520,AT5G44120,AT5G44260,AT5G44610,AT5G47950,AT5G52050,AT5G53980,AT5G57530,AT5G57760,AT5G58750,AT5G62860,AT5G67400,AT1G05240,AT2G29870,AT2G33810,AT3G02610,AT3G13710 MANDAOKAR_JASMONATE_0.5H_STAMEN_DIFF Jasmonate-esponsive genes (0.5hr)in stamens of Arabaidopsis thaliana (Table S1 PubmedID:16805732) AT1G72450,AT5G05600,AT1G19670,AT1G19180,AT1G61890,AT5G06870,AT1G76640,AT1G17380,AT2G34600,AT5G13220,AT3G50280,AT1G20510,AT5G47240,AT1G70700,AT5G56980,AT1G74430,AT1G74950,AT5G67150,AT5G14700 MANDAOKAR_JASMONATE_2H_STAMEN_DIFF Jasmonate-esponsive genes (2hrs)in stamens of Arabaidopsis thaliana (Table S1 PubmedID:16805732) AT2G47600,AT1G44350,AT4G15210,AT4G16590,AT5G08750,AT5G04340,AT5G09440,AT5G24780,AT5G17490,AT5G67150,AT5G65280,AT5G65300,AT5G62680,AT5G60910,AT5G59730,AT5G59050,AT5G59080,AT5G59040,AT5G54940,AT5G49480,AT5G49130,AT5G47240,AT5G44720,AT5G43760,AT5G40350,AT5G40340,AT5G39610,AT5G38120,AT5G38000,AT5G37980,AT5G24420,AT5G23820,AT5G22270,AT5G17990,AT5G13820,AT5G13750,AT5G12890,AT5G13220,AT5G09980,AT5G06870,AT5G06860,AT5G05600,AT5G02940,AT3G58990,AT3G56200,AT3G55980,AT3G50970,AT3G51450,AT3G47470,AT3G46660,AT3G45140,AT3G44300,AT4G39940,AT4G39130,AT4G37430,AT4G34135,AT4G34138,AT4G33150,AT4G31500,AT4G30460,AT4G30450,AT4G29700,AT4G27860,AT4G27570,AT4G25480,AT4G25030,AT4G23990,AT4G23600,AT4G21990,AT4G21910,AT4G13790,AT4G13180,AT4G12410,AT4G11310,AT4G09740,AT4G08870,AT4G04610,AT4G02360,AT4G01080,AT4G01350,AT1G25450,AT1G19670,AT2G40460,AT1G19180,AT1G51780,AT1G69530,AT1G35910,AT4G18440,AT1G31550,AT3G16860,AT3G23820,AT3G27810,AT3G27820,AT3G25290,AT3G14660,AT3G22740,AT3G15510,AT3G15500,AT3G02875,AT3G09560,AT3G07700,AT3G07720,AT3G07600,AT3G11480,AT3G16470,AT1G01600,AT1G20510,AT1G76640,AT1G76690,AT1G76790,AT1G76390,AT1G76380,AT1G70690,AT1G67560,AT1G52890,AT1G70700,AT1G63840,AT1G69370,AT1G74090,AT1G74010,AT1G74100,AT1G69930,AT1G69870,AT1G69890,AT1G72470,AT1G68290,AT1G72510,AT2G43550,AT1G06000,AT1G17420,AT1G62990,AT1G63010,AT1G19640,AT1G32920,AT1G26770,AT1G44790,AT1G07750,AT1G28480,AT1G32640,AT1G76160,AT1G30530,AT1G11580,AT1G11440,AT1G35580,AT1G80160,AT1G59640,AT1G74950,AT1G53885,AT1G64200,AT1G15360,AT1G14130,AT1G13130,AT1G24070,AT1G78660,AT1G54030,AT1G54020,AT1G54040,AT1G05560,AT2G47180,AT2G05070,AT2G20610,AT2G36590,AT2G22500,AT1G61890,AT1G61800,AT2G17730,AT1G24100,AT2G28400,AT2G46510,AT2G32150,AT2G18480,AT2G28130,AT2G27690,AT2G29440,AT2G29420,AT2G29450,AT2G26980,AT2G46650,AT2G41290,AT2G38760,AT2G22770,AT2G34600,AT2G39330,AT2G39210,AT2G34490,AT2G34430,AT2G39350,AT2G32510,AT2G23450,AT2G30860,AT2G44130,AT2G22980,AT2G30140,AT2G39980,AT2G40000,AT2G44500,AT2G34810 MANDAOKAR_JASMONATE_8H_STAMEN_DIFF Jasmonate-esponsive genes (8hrs)in stamens of Arabaidopsis thaliana (Table S1 PubmedID:16805732) AT2G47600,AT2G45210,AT2G47550,AT1G44222,AT4G15210,AT4G15550,AT4G16146,AT4G14815,AT4G17090,AT4G16620,AT4G16730,AT4G15250,AT4G14270,AT5G08750,AT5G04200,AT5G08740,AT1G73500,AT1G44100,AT1G32180,AT5G24780,AT5G13170,AT5G20830,AT5G20110,AT5G19855,AT4G36380,AT4G36770,AT3G51860,AT1G58170,AT5G15630,AT5G15870,AT1G31720,AT5G26731,AT5G24860,AT5G24940,AT5G66040,AT5G65870,AT5G66170,AT5G65280,AT5G65380,AT5G63530,AT5G62920,AT5G62680,AT5G62360,AT5G61430,AT5G61605,AT5G60680,AT5G59120,AT5G59040,AT5G58070,AT5G56870,AT5G57050,AT5G56540,AT5G56330,AT5G55620,AT5G55060,AT5G54870,AT5G54940,AT5G54570,AT5G54095,AT5G53970,AT5G52810,AT5G52310,AT5G52300,AT5G52400,AT5G50100,AT5G50010,AT5G49730,AT5G49130,AT5G47530,AT5G47560,AT5G47635,AT5G47330,AT5G47050,AT5G46960,AT5G46240,AT5G46050,AT5G44630,AT5G44700,AT5G44400,AT5G43150,AT5G43340,AT5G42750,AT5G40350,AT5G40690,AT5G39870,AT5G38070,AT5G36150,AT5G24655,AT5G24420,AT5G24150,AT5G23750,AT5G23820,AT5G22860,AT5G22460,AT5G19140,AT5G19130,AT5G17860,AT5G17340,AT5G17230,AT5G13670,AT5G12890,AT5G12950,AT5G13330,AT5G13220,AT5G11950,AT5G11350,AT5G11420,AT5G10830,AT5G08540,AT5G08480,AT5G08030,AT5G08250,AT5G07820,AT5G07550,AT5G07510,AT5G07520,AT5G07530,AT5G07540,AT5G07560,AT5G06870,AT5G06860,AT5G05410,AT5G05600,AT5G03170,AT5G03230,AT5G03180,AT5G02940,AT5G02580,AT5G01610,AT3G62650,AT3G61890,AT3G61930,AT3G61230,AT3G57810,AT3G57800,AT3G57510,AT3G56080,AT3G55980,AT3G52810,AT3G52820,AT3G52740,AT3G52600,AT3G51590,AT3G50970,AT3G49780,AT3G49210,AT3G48740,AT3G48360,AT3G47600,AT3G47340,AT3G46660,AT3G45010,AT3G45140,AT3G44320,AT3G44300,AT3G43960,AT3G42880,AT4G39210,AT4G39130,AT4G39000,AT4G37990,AT4G37900,AT4G37870,AT4G36350,AT4G36040,AT4G35060,AT4G35300,AT4G34970,AT4G34990,AT4G34510,AT4G34000,AT4G34135,AT4G33540,AT4G33150,AT4G32460,AT4G32250,AT4G31500,AT4G30770,AT4G30460,AT4G30450,AT4G30140,AT4G29700,AT4G28940,AT4G28500,AT4G28240,AT4G27860,AT4G27330,AT4G25480,AT4G23920,AT4G22620,AT4G20050,AT4G19160,AT4G18960,AT4G18780,AT4G18425,AT4G13790,AT4G13180,AT4G13250,AT4G12410,AT4G11310,AT4G09460,AT4G09740,AT4G08870,AT4G08290,AT4G05120,AT4G04460,AT4G02380,AT4G02050,AT4G01430,AT4G00750,AT1G25520,AT1G19670,AT2G33480,AT4G10310,AT1G67070,AT1G22015,AT1G19180,AT1G06990,AT1G16850,AT1G18210,AT1G51780,AT1G56220,AT1G69530,AT1G30350,AT1G35910,AT1G66850,AT1G33430,AT1G75300,AT1G33360,AT3G28740,AT3G28530,AT3G25620,AT3G19010,AT3G19020,AT3G25050,AT3G23790,AT3G27810,AT2G24450,AT1G23690,AT1G23550,AT1G23570,AT2G17470,AT3G16330,AT3G26290,AT3G26125,AT3G25710,AT3G20270,AT3G20340,AT3G18660,AT3G26940,AT3G18830,AT3G25290,AT3G16920,AT3G14560,AT3G24503,AT3G15850,AT3G22740,AT3G22650,AT3G14230,AT3G15510,AT3G15400,AT3G15500,AT3G16570,AT3G22420,AT3G02440,AT3G04290,AT3G04360,AT3G02875,AT3G07970,AT3G08040,AT3G02930,AT3G07830,AT3G11930,AT3G05930,AT3G10890,AT3G10740,AT3G04690,AT3G05610,AT3G10525,AT3G10470,AT3G01980,AT3G11660,AT3G01350,AT3G01310,AT3G10320,AT3G01470,AT3G03540,AT3G07700,AT3G03910,AT1G01470,AT1G15670,AT1G28130,AT1G60960,AT1G77590,AT1G64370,AT1G72260,AT1G49890,AT1G52240,AT1G72180,AT1G76790,AT1G72700,AT1G76590,AT1G76520,AT1G76410,AT1G68110,AT1G73220,AT1G66360,AT1G67540,AT1G52890,AT1G70700,AT1G74540,AT1G68500,AT1G70480,AT1G74010,AT1G74100,AT1G74020,AT1G69870,AT1G72470,AT1G72450,AT1G68290,AT1G10970,AT1G51500,AT2G41850,AT2G43860,AT2G43840,AT1G08065,AT1G32450,AT1G06260,AT1G06250,AT1G78390,AT1G29195,AT1G29230,AT1G17380,AT1G01320,AT1G63010,AT1G19660,AT1G20120,AT1G20190,AT1G48480,AT1G44790,AT1G79780,AT1G28470,AT1G28375,AT1G21140,AT1G28430,AT1G01750,AT1G01070,AT1G49660,AT1G18410,AT1G76240,AT1G11580,AT1G80920,AT1G64610,AT1G33700,AT1G80160,AT1G80130,AT1G59640,AT1G78000,AT1G78070,AT1G74950,AT1G42470,AT1G70810,AT1G64110,AT2G48150,AT1G49490,AT1G11210,AT1G17180,AT1G31350,AT1G15460,AT1G06620,AT1G14130,AT1G75910,AT1G75930,AT1G75920,AT1G75940,AT1G13130,AT1G79460,AT1G59740,AT1G64800,AT1G23240,AT1G23250,AT1G24030,AT2G17500,AT2G27180,AT1G54030,AT1G54020,AT1G54040,AT1G05570,AT1G05680,AT2G38820,AT2G47180,AT2G03830,AT2G03850,AT2G40180,AT2G28720,AT2G31750,AT2G42600,AT2G42530,AT2G42540,AT2G21590,AT2G15340,AT1G04500,AT1G26930,AT1G26920,AT1G09310,AT2G13620,AT2G21490,AT2G24550,AT2G36950,AT2G37010,AT2G03740,AT2G22560,AT2G28470,AT1G79250,AT1G54570,AT1G22640,AT1G61890,AT1G78860,AT1G03170,AT1G12090,AT1G10360,AT1G09380,AT1G05340,AT2G17730,AT2G17720,AT1G03550,AT1G61110,AT1G23090,AT1G23060,AT1G61590,AT1G52080,AT1G03850,AT1G62570,AT1G55560,AT1G23580,AT1G23600,AT1G23610,AT1G23640,AT1G23520,AT1G23590,AT1G23670,AT2G28400,AT2G18340,AT2G10970,AT2G16730,AT2G37210,AT2G15890,AT2G15970,AT2G05540,AT2G28200,AT2G31980,AT2G32150,AT2G18480,AT2G24210,AT2G40670,AT2G02140,AT2G28085,AT2G28130,AT2G27690,AT2G29420,AT2G29450,AT2G46680,AT2G41290,AT2G31110,AT2G31100,AT2G46030,AT2G29670,AT2G47120,AT2G22860,AT2G34600,AT2G39420,AT2G38400,AT2G32510,AT2G38080,AT2G38110,AT2G38240,AT2G23510,AT2G37750,AT2G44010,AT2G44130,AT2G23150,AT2G30240,AT2G23810,AT2G23800,AT2G39890,AT2G40080,AT2G44500,AT2G33830,AT2G30500,AT2G45610 MANDAOKAR_JASMONATE_22H_STAMEN_DIFF Jasmonate-esponsive genes (22hrs)in stamens of Arabaidopsis thaliana (Table S1 PubmedID:16805732) AT2G26580,AT2G23170,AT2G40840,AT2G47600,AT2G45230,AT2G45190,AT5G12390,AT1G67800,AT1G67730,AT4G16146,AT4G14930,AT4G16442,AT4G16640,AT4G17090,AT4G17770,AT4G16690,AT4G15490,AT4G17720,AT4G14900,AT4G17080,AT4G16620,AT4G16680,AT4G16730,AT4G16040,AT4G16130,AT4G16480,AT4G15250,AT4G15020,AT4G14540,AT4G14240,AT4G14270,AT1G25230,AT1G28330,AT5G08750,AT5G04200,AT5G04340,AT1G73410,AT1G35140,AT1G32240,AT1G73540,AT1G32200,AT1G32170,AT1G58420,AT5G19600,AT5G28520,AT5G19730,AT5G13170,AT5G13180,AT5G20630,AT5G21100,AT5G08350,AT5G19870,AT5G19900,AT5G20110,AT5G19855,AT4G36990,AT4G37180,AT4G36770,AT4G36540,AT4G36740,AT4G36860,AT3G51860,AT3G51890,AT5G17060,AT5G17650,AT5G15870,AT5G14940,AT5G14780,AT5G35200,AT5G30500,AT5G28050,AT5G27930,AT5G27210,AT5G26340,AT5G26731,AT5G26240,AT5G25550,AT5G25610,AT5G25770,AT5G25830,AT5G25460,AT5G25110,AT5G25220,AT5G04870,AT5G24930,AT5G04860,AT5G67550,AT5G67110,AT5G66640,AT5G66590,AT5G66460,AT5G66550,AT5G65870,AT5G66250,AT5G65660,AT5G65380,AT5G64840,AT5G64560,AT5G64440,AT5G64570,AT5G64260,AT5G63880,AT5G63850,AT5G63530,AT5G63190,AT5G62850,AT5G62430,AT5G62080,AT5G62070,AT5G61850,AT5G61340,AT5G61380,AT5G61520,AT5G61710,AT5G61670,AT5G61420,AT5G60680,AT5G59500,AT5G59220,AT5G59080,AT5G58650,AT5G58670,AT5G58070,AT5G57660,AT5G57040,AT5G57050,AT5G55050,AT5G54730,AT5G54470,AT5G54160,AT5G53190,AT5G53200,AT5G53120,AT5G53550,AT5G53030,AT5G52310,AT5G52400,AT5G51950,AT5G50800,AT5G50360,AT5G50010,AT5G49740,AT5G49910,AT5G49360,AT5G48970,AT5G49130,AT5G47650,AT5G47920,AT5G47050,AT5G46115,AT5G46230,AT5G45950,AT5G46050,AT5G44630,AT5G44680,AT5G44180,AT5G43780,AT5G43850,AT5G43440,AT5G42750,AT5G42680,AT5G41990,AT5G40960,AT5G40350,AT5G40170,AT5G40155,AT5G40390,AT5G39050,AT5G37170,AT5G37180,AT5G35970,AT5G24520,AT5G24660,AT5G24580,AT5G24010,AT5G24080,AT5G24240,AT5G24270,AT5G23530,AT5G23750,AT5G23730,AT5G23820,AT5G23330,AT5G23340,AT5G23210,AT5G23020,AT5G22630,AT5G22460,AT5G19140,AT5G22270,AT5G22290,AT5G19170,AT5G19090,AT5G18310,AT5G18590,AT5G18600,AT5G18060,AT5G17850,AT5G17230,AT5G16590,AT5G16340,AT5G16440,AT5G15240,AT5G14180,AT5G13580,AT5G13740,AT5G13770,AT5G13800,AT5G12890,AT5G13220,AT5G11910,AT5G11350,AT5G11460,AT5G11540,AT5G10930,AT5G10860,AT5G10430,AT5G09760,AT5G08260,AT5G08480,AT5G08010,AT5G08250,AT5G07910,AT5G07280,AT5G07010,AT5G07110,AT5G06980,AT5G06530,AT5G06490,AT5G05850,AT5G05200,AT5G04770,AT5G03230,AT5G02560,AT5G02170,AT5G01810,AT5G01210,AT3G62650,AT3G63010,AT3G62550,AT3G62860,AT3G61890,AT3G61900,AT3G61970,AT3G61060,AT3G59900,AT3G59140,AT3G59010,AT3G57880,AT3G58120,AT3G58450,AT3G57800,AT3G57950,AT3G58060,AT3G57330,AT3G57010,AT3G56080,AT3G56260,AT3G55730,AT3G55610,AT3G55310,AT3G54500,AT3G54300,AT3G54200,AT3G54120,AT3G53510,AT3G53300,AT3G52780,AT3G52820,AT3G52740,AT3G52500,AT3G52480,AT3G51750,AT3G50970,AT3G51600,AT3G51400,AT3G50660,AT3G50350,AT3G49780,AT3G48690,AT3G48550,AT3G48360,AT3G47960,AT3G47600,AT3G47420,AT3G47340,AT3G47500,AT3G47320,AT3G47110,AT3G46290,AT3G45780,AT3G44530,AT3G44550,AT3G44350,AT3G43960,AT3G43270,AT3G43430,AT4G39900,AT4G38960,AT4G39030,AT4G39010,AT4G39180,AT4G37800,AT4G37470,AT4G37530,AT4G35670,AT4G35780,AT4G35750,AT4G35060,AT4G35300,AT4G34970,AT4G34990,AT4G34510,AT4G34560,AT4G34680,AT4G34000,AT4G33950,AT4G34080,AT4G34230,AT4G33905,AT4G33920,AT4G33550,AT4G33700,AT4G33300,AT4G32870,AT4G32890,AT4G32180,AT4G31400,AT4G31020,AT4G30490,AT4G30270,AT4G29700,AT4G28780,AT4G28480,AT4G28490,AT4G28640,AT4G28240,AT4G28085,AT4G27800,AT4G27820,AT4G27830,AT4G27900,AT4G27410,AT4G27520,AT4G27590,AT4G27280,AT4G26690,AT4G26830,AT4G26140,AT4G25760,AT4G25170,AT4G25380,AT4G25390,AT4G25480,AT4G25010,AT4G25000,AT4G24380,AT4G24370,AT4G24040,AT4G24130,AT4G22770,AT4G22940,AT4G22960,AT4G22620,AT4G21910,AT4G21120,AT4G19960,AT4G19680,AT4G19690,AT4G19185,AT4G19160,AT4G19420,AT4G19430,AT4G19460,AT4G18960,AT4G18920,AT4G18550,AT4G18140,AT4G18010,AT4G12730,AT4G12690,AT4G12530,AT4G12280,AT4G09460,AT4G08290,AT4G05070,AT4G05120,AT4G04450,AT4G04020,AT4G03510,AT4G03410,AT4G02430,AT4G01840,AT4G00680,AT1G25560,AT1G18530,AT1G19850,AT4G10310,AT1G66940,AT2G40460,AT1G20280,AT1G17830,AT1G22040,AT1G33970,AT1G18210,AT1G55110,AT1G51700,AT1G56220,AT1G56280,AT1G76890,AT3G06150,AT3G10985,AT1G75300,AT1G66120,AT3G28200,AT3G30180,AT3G52340,AT3G27150,AT3G25620,AT3G13760,AT3G13650,AT3G20940,AT3G21420,AT3G22220,AT3G22880,AT3G22910,AT3G23820,AT3G26450,AT3G22530,AT3G30720,AT3G19580,AT3G18250,AT3G18280,AT3G20250,AT3G27880,AT3G17440,AT3G28007,AT3G17420,AT3G28050,AT3G26520,ATMG01080,AT1G23550,AT2G17470,AT1G10660,AT1G78110,AT3G16330,AT3G26130,AT3G11000,AT3G13810,AT3G25810,AT3G13310,AT3G18360,AT3G23050,AT3G23080,AT3G29190,AT3G26960,AT3G18830,AT3G26740,AT3G28420,AT3G29030,AT3G25870,AT3G14690,AT3G21670,AT3G13910,AT3G15840,AT3G27810,AT3G27690,AT3G15810,AT3G23410,AT3G14380,AT3G14280,AT3G14230,AT3G15540,AT3G15460,AT3G17630,AT3G16720,AT3G22420,AT3G17330,AT3G02690,AT3G02380,AT3G06640,AT3G06490,AT3G05960,AT3G04520,AT3G02875,AT3G08040,AT3G08800,AT3G08720,AT3G09770,AT3G09760,AT3G05880,AT3G05890,AT3G04630,AT3G04010,AT3G04060,AT3G02040,AT3G06330,AT3G05640,AT3G10525,AT3G10590,AT3G01980,AT3G08940,AT3G07310,AT3G07470,AT3G03470,AT3G07490,AT3G11660,AT3G05470,AT3G10340,AT3G01470,AT3G01520,AT3G01530,AT3G07650,AT3G11430,AT3G11480,AT1G69050,AT1G01470,AT1G15740,AT1G43900,AT1G20450,AT1G20440,AT1G35310,AT1G28130,AT1G27980,AT1G55280,AT1G55260,AT1G77760,AT1G77680,AT1G77450,AT1G60960,AT1G64405,AT1G77590,AT1G29400,AT1G29670,AT1G49890,AT1G72180,AT1G68440,AT1G76790,AT1G76820,AT1G72700,AT1G76590,AT1G76410,AT1G76490,AT1G67970,AT1G68010,AT1G30080,AT1G78100,AT1G78090,AT1G73760,AT1G73220,AT1G66400,AT1G52880,AT1G70660,AT1G70700,AT1G70670,AT1G74310,AT1G70480,AT1G69370,AT1G74100,AT1G69840,AT1G68190,AT1G51500,AT2G41850,AT2G47270,AT2G43780,AT2G43870,AT1G08065,AT1G32460,AT1G32450,AT1G78260,AT1G29230,AT1G29130,AT1G21400,AT1G02470,AT1G44970,AT1G06040,AT1G12240,AT1G07570,AT1G63010,AT1G75450,AT1G75370,AT1G75410,AT1G19660,AT1G19640,AT1G32920,AT1G48450,AT1G48480,AT1G07610,AT1G18680,AT1G21140,AT1G07850,AT1G14280,AT1G71710,AT1G71680,AT1G01750,AT1G01630,AT1G01720,AT1G01120,AT1G01070,AT1G50020,AT1G47330,AT1G32700,AT1G32780,AT1G76160,AT1G47870,AT1G08250,AT1G15500,AT1G76240,AT1G08230,AT1G30490,AT1G08340,AT1G08280,AT1G08320,AT1G11545,AT1G50670,AT1G11440,AT1G22380,AT1G22400,AT1G80660,AT1G64640,AT1G37130,AT1G80240,AT1G80180,AT1G80130,AT1G59650,AT1G02816,AT1G52690,AT1G78080,AT1G78070,AT1G74820,AT1G68690,AT1G26150,AT1G48410,AT1G48420,AT1G70940,AT1G64060,AT1G64110,AT1G72960,AT1G47610,AT1G49450,AT1G11210,AT1G50280,AT1G21670,AT1G17190,AT1G15380,AT1G06430,AT1G06460,AT1G06520,AT1G06570,AT1G06650,AT1G62800,AT1G75840,AT1G28710,AT1G10760,AT1G21010,AT1G21000,AT1G14740,AT1G59860,AT1G65730,AT1G75620,AT2G16130,AT1G03090,AT1G54120,AT1G54040,AT1G05570,AT1G30710,AT2G31380,AT2G38820,AT2G05100,AT2G22100,AT2G31680,AT2G31940,AT2G03980,AT2G42600,AT2G42530,AT2G42540,AT2G21590,AT2G21560,AT2G01830,AT1G09310,AT2G24580,AT2G24550,AT2G04570,AT2G40330,AT2G36830,AT2G21970,AT2G21880,AT2G35840,AT2G03810,AT1G79360,AT1G54570,AT1G22760,AT1G22640,AT1G09155,AT1G09250,AT1G78780,AT1G70420,AT1G12080,AT1G03170,AT1G12090,AT1G61740,AT1G61680,AT1G10360,AT1G10150,AT1G30795,AT1G10090,AT1G05340,AT1G05170,AT2G17710,AT1G04560,AT1G04580,AT2G17660,AT1G65620,AT1G09910,AT1G70060,AT1G23000,AT1G62280,AT1G62300,AT1G23010,AT2G17880,AT1G24140,AT1G23120,AT1G24610,AT1G61590,AT1G03850,AT1G55510,AT1G03770,AT1G62570,AT1G51210,AT1G51400,AT1G23740,AT1G23560,AT1G05100,AT2G42890,AT2G28400,AT2G22660,AT2G16750,AT2G46600,AT2G15890,AT2G15970,AT2G15960,AT2G05540,AT2G07560,AT2G32210,AT2G32190,AT2G40090,AT2G18050,AT2G17950,AT2G35690,AT2G01670,AT2G42300,AT2G15090,AT2G18570,AT2G19500,AT2G24210,AT2G24270,AT2G24180,AT2G18720,AT2G40680,AT2G45040,AT2G39010,AT2G39060,AT2G06850,AT2G27690,AT2G27820,AT2G27830,AT2G29340,AT2G46680,AT2G01610,AT2G41230,AT2G41220,AT2G41410,AT2G38530,AT2G16890,AT2G35300,AT2G23970,AT2G29670,AT2G29730,AT2G29660,AT2G46950,AT2G22880,AT2G29980,AT2G44740,AT2G39450,AT2G39210,AT2G38340,AT2G32510,AT2G41090,AT2G41190,AT2G41140,AT2G38240,AT2G37770,AT2G44010,AT2G19400,AT2G30080,AT2G30070,AT2G40080,AT2G44560,AT2G34790,AT2G02710,AT2G30540,AT2G45550,AT2G45600,AT2G45560,AT2G30520,AT2G30500,AT2G45570,AT2G45580,AT2G26750 MANDAOKAR_JASMONATE_IATE_TFS_UP Late induced TFs in Jasmonate responsive transcription factors (Table S3 PubmedID:16805732) AT3G06490,AT2G47270,AT1G68690,AT5G50010,AT1G22640,AT1G22380,AT1G25560,AT3G01530,AT5G57660,AT5G61850,AT2G38340,AT3G55730,AT1G47870,AT4G34990,AT1G76890,AT4G15250,AT3G01470,AT1G62300,AT3G04060,AT3G09770,AT3G15540,AT5G61380,AT3G23050,AT3G19580,AT2G42300,AT1G76410,AT5G24580,AT4G28640,AT3G28730,AT3G49210,AT3G44350,AT3G61230,AT3G58120,AT3G19020,AT1G49490,AT3G10470,AT5G13330,AT1G68190,AT3G61970,AT3G07650,AT2G45190,AT1G09250,AT1G04500,AT2G28200,AT1G61110,AT1G64800,AT1G50670,AT2G26580,AT1G73760,AT3G57800,AT2G33480,AT4G36540,AT1G28470,AT5G54470,AT2G29660,AT4G09460,AT3G43430,AT1G73410,AT4G38960,AT1G30795,AT3G16720,AT4G22770,AT4G14540,AT1G67970,AT5G53550,AT5G53200,AT2G38330 MANDAOKAR_JASMONATE_IATE_TFS_DN Late repressed TFs in Jasmonate responsive transcription factors (Table S3 PubmedID:16805732) AT4G34000,AT3G10590,AT3G47600,AT3G14230,AT1G77450,AT4G27330,AT3G25710,AT4G18770,AT3G61890,AT5G61420,AT3G13810,AT4G36740,AT4G04450,AT4G28500,AT1G19850,AT2G17950,AT5G25830,AT5G22290,AT4G36990,AT1G08320,AT5G13180,AT1G30490,AT5G44180,AT3G47500,AT3G02380,AT4G18960,AT2G46680,AT5G17650,AT1G06040,AT2G31380,AT5G47640,AT4G27410,AT1G32240,AT5G61430,AT4G27900,AT1G01720,AT4G37180,AT1G75410,AT4G32890,AT5G67110,AT5G24930,AT5G05410,AT5G62430,AT5G06490,AT4G34680,AT1G78080,AT1G51700,AT1G55110,AT5G25220,AT1G52880,AT4G18780,AT5G47650 MANDAOKAR_ATMYB3_DIFF Showed similar expression pattern with atMYB3 by Gene Angler (Table S4 PubmedID:16805732) AT1G22640,AT1G29230,AT3G14560,AT4G13790,AT4G29010,AT3G62650,AT3G10320,AT3G27810,AT5G49130,AT5G40350,AT4G33150,AT2G42900,AT1G44100,AT4G35110,AT1G75300,AT4G08290,AT1G76240,AT2G45580,AT1G22380,AT4G16130,AT3G01980,AT1G61680,AT3G28007,AT3G28050,AT3G51130,AT2G45040,AT4G16515,AT1G23060,AT1G09155,AT4G04020,AT3G01750,AT5G43600,AT5G08750,AT3G55870,AT2G27830,AT3G55730,AT3G55290,AT3G14380,AT2G40610,AT3G01530,AT1G01770,AT2G46030,AT1G02470,AT5G47920,AT1G78110,AT1G35310,AT2G17880,AT3G15540,AT4G01840,AT2G25530,AT1G59640,AT1G52890,AT2G24210,AT5G20830,AT5G10770,AT4G25700,AT4G09460,AT2G21940,AT1G75290,AT5G48900,AT1G54570,AT4G12580,AT3G07700,AT4G40010,AT5G67020,AT1G23040,AT2G01460,AT1G26930,AT5G05280,AT1G29490,AT1G12080,AT1G63840,AT2G39725,AT1G80960,AT4G39480,AT2G33380,AT1G35170,AT2G42890,AT3G55970,AT1G04970,AT3G61070,AT1G26920,AT5G38130,AT4G16360,AT5G13220,AT2G47270,AT4G30960,AT3G22910,AT5G64570,AT3G06490,AT2G28200,AT1G03520,AT5G54730,AT2G28630,AT2G39340,AT1G51440,AT2G19500,AT1G29195,AT4G25010,AT1G20440,AT1G35910,AT1G05100,AT4G36110,AT1G35190,AT1G79520,AT4G36400,AT5G52250,AT5G52400,AT5G23750,AT4G16670,AT3G11430,AT5G54870,AT3G49590,AT1G20450,AT5G20270,AT3G51250,AT5G50800,AT5G25110,AT4G34990,AT4G18980,AT2G44130,AT5G66590,AT5G50940,AT2G38240,AT1G28260,AT1G22930,AT1G55510,AT5G63850,AT3G13130,AT5G59400,AT1G47330,AT4G15550,AT3G26100,AT4G24380,AT5G65110,AT1G55270,AT1G25230,AT4G36790,AT5G65870,AT1G51210,AT2G20900,AT4G32070,AT4G14930,AT3G60030,AT5G20120,AT3G51840,AT4G24010,AT2G46680,AT1G52830,AT1G21460,AT1G35180,AT1G55265,AT2G39350,AT2G44140,AT3G55310 LEE_STA1-1/WT_UP Level significantly higher more than 2 times in sta1-1 than in the wild type (Table S3 PubmedID:16751345) AT2G41730,AT2G04050,AT5G51440,AT5G60250,AT2G21640,AT2G03760,AT2G18190,AT4G27150,AT2G04070,AT2G20800,AT1G17960,AT5G24280,AT2G47520,AT3G28580,AT1G36180,AT1G32870,AT1G03990,AT2G03130,AT2G32020,AT3G59820,AT5G02580,AT3G61630,AT2G35480,AT5G18270,AT2G28820,AT3G47640,AT4G36580,AT5G54100,AT1G03470,AT3G27060,AT3G16660,AT5G56350,AT1G24090,AT5G14580,AT1G13610,AT1G74450,AT4G03320,AT2G37690,AT3G27620,AT2G42270,AT4G37910,AT3G15140,AT1G13330,AT1G23100,AT1G10170,AT3G53220,AT5G62520,AT3G18610,AT3G10190,AT3G18510,AT1G30160,AT5G64060,AT3G27580,AT4G00600,AT3G18280,AT5G09420,AT2G18330,AT3G21600,AT1G28060,AT3G49240,AT2G39795,AT2G36230,AT2G29760,AT1G32860,AT4G36680,AT3G27280,AT1G07500,AT2G37260,AT5G61030,AT3G22310,AT5G494 JAIN_A3L5-TRANSGENE_UP Upregulated in A3L5 transgenic line (Table S2 PubmedID:17116242) AT1G59900,AT2G17420,AT2G18450,AT1G24340,AT5G39110,AT5G47810,AT2G23590,AT1G25210,AT5G54290,AT2G02400,AT3G61010,AT2G03980,AT3G04010,AT1G09390,AT1G34040,AT4G40060,AT5G03200,AT5G15020,AT1G22590,AT3G15590,AT3G13760,AT2G02680,AT3G53370,AT1G60710,AT3G45930,AT1G58270,AT5G10400,AT3G44890,AT3G21280,AT1G73330,AT1G24240,AT1G58380,AT1G62290,AT5G59090,AT2G21045,AT2G22970,AT5G54140,AT2G46450,AT4G21680,AT4G20410,AT1G31820,AT1G61250,AT4G15660,AT3G08040,AT1G66540,AT4G12330,AT4G12490,AT4G27150,AT3G53230,AT1G12730,AT1G59124,AT2G41260,AT4G16860,AT3G50480,AT1G59218,AT2G43535,AT3G59930,AT5G05750,AT5G40910,AT2G43530,AT4G07820,AT5G45490,AT2G15080,AT4G16990,AT5G36930,AT4G15910,AT3G46530,AT1G69550,AT3G26744,AT4G16890,AT5G46490,AT4G16950,AT1G12220,AT1G33790,AT3G21600,AT3G44630,AT3G26300,AT3G43740,AT3G46280,AT1G65790,AT1G75960,AT1G31910,AT3G27580,AT3G57710,AT5G13360,AT1G27540,AT3G07950,AT3G18980,AT2G11240,AT1G20390,AT1G33130,AT4G08110,AT2G23330,AT4G16870,AT1G23960,AT2G14460,AT5G24660,AT3G44430,AT4G20480,AT5G26270,AT1G12400,AT5G55790,AT2G41650,AT1G35612,AT1G24996,AT5G44580,AT3G61480,AT3G18510,AT5G45500,AT4G39675,orf111b,AT4G32960,AT4G09680,AT5G47455,AT2G43540,AT2G34070,AT5G01610,AT1G12030,AT5G27990,AT4G21140,AT2G41810,AT3G19515,AT4G13630,AT3G62460,AT2G21860,AT5G45550,AT2G14880,AT3G16450,AT1G16560,AT4G21860,AT3G30720,AT5G58980 JAIN_A3L5-TRANSGENE_DN Downregulated in A3L5 transgenic line (Table S2 PubmedID:17116242) AT3G17130,AT3G51450,AT1G71990,AT1G60270,AT4G19810,AT5G08380,AT4G16690,AT1G55120,AT3G48720,AT3G02040,AT5G22500,AT5G65890,AT1G74710,AT1G52400,AT1G20620,AT1G08310,AT4G25100,AT3G16700,AT3G50440,AT1G09420,AT3G29410,AT3G57260,AT1G58290,AT3G47340,AT5G28030,AT2G40100,AT5G38020,AT5G04380,AT1G62770,AT5G10380,AT1G34180,AT2G21130,AT4G21326,AT4G20070,AT5G47550,AT1G02300,AT4G21650,AT4G04770,AT3G56160,AT3G54140,AT4G19960,AT1G50950,AT2G38940,AT4G30720,AT4G37310,AT1G26390,AT3G20660,AT5G10180,AT5G14570,AT1G76530,AT5G49630,AT2G30770,AT2G47800,AT5G55450,AT2G45220,AT2G43620,AT2G40610,AT2G18660,AT5G13320,AT4G08390,AT1G59620,AT4G23600,AT2G14610,AT4G19470,AT4G23210,AT5G51470,AT2G41090,AT1G21250,AT5G64630,AT1G21100,AT3G07390,AT4G12980,AT5G20150,AT5G45310,AT2G03020,AT1G12080,AT1G19960,AT1G13650,AT3G23910,AT5G02020,AT1G17700,AT1G26530,AT5G02130,AT3G61870,AT3G10020,AT1G18980,AT1G62250,AT1G13470,AT5G64050,AT5G17100,AT1G51920,AT1G52000,AT4G12280,AT2G36885,AT5G64510,AT2G23480,AT2G27540,AT3G22231,AT2G40960,AT3G28270,AT5G51720,AT5G35940,AT2G35820,AT2G14560,AT5G15360,AT3G48640 VOS_ATTACKER-COMBINATION/MOCKREATED-TREATED_UP Up-regulated genes in the different Arabidopsis-attacker combinations compared with mockreated-treated Arabidopsis plants (Table 1 PubmedID:16167763) AT5G37780,AT4G23650,AT2G18960,AT4G05320,AT3G13920 VOS_ATTACKER-COMBINATION/MOCKREATED-TREATED_DN Down-regulated genes in the different Arabidopsis-attacker combinations compared with mockreated-treated Arabidopsis plants (Table 1 PubmedID:16167763) AT5G44340,AT2G09990,AT3G18780,AT2G45960 VERT_BRZ-COL_UP Upregulated in BRZ Col (Table S4 PubmedID:18599455) AT5G22580,AT5G09220,AT1G47600,AT2G37030,AT4G12410,AT5G01740,AT5G10180,AT3G05730,AT4G08040,AT3G28290,AT3G53980,AT4G15680,AT5G15180,AT5G65730,AT2G05070,AT2G33790,AT4G15690,AT1G21460,AT3G02850,AT3G23730,AT1G06080,AT5G55620,AT2G32990,AT3G45160,AT3G23800,AT2G41230,AT3G01450,AT2G27550,AT5G62340,AT3G30180,AT1G21050,AT5G38980,AT1G48750,AT1G79360,AT1G77640,AT5G05880,AT3G46490,AT2G30070,AT5G34940,AT3G15370,AT3G62090,AT2G41050,AT1G44830,AT2G39530,AT4G35150,AT5G63180,AT5G43520,AT2G29670,AT1G73830,AT4G07820,AT5G53830,AT1G67050,AT5G13910,AT3G16440,AT3G62950,AT2G39350,AT1G22890,AT2G21560,AT3G51400,AT5G14920,AT3G21870,AT4G36670,AT3G16800,AT4G22160,AT5G12050,AT3G15620,AT1G49210,AT2G44910,AT2G41070,AT5G64240,AT5G14090,AT1G52140,AT4G24050,AT1G49470,AT5G24030,AT4G02330,AT2G33810,AT2G30510,AT1G64590,AT3G01670,AT2G34430,AT5G05960,AT2G18290,AT2G21910,AT5G02540,AT4G00238,AT1G17180,AT3G23810,AT4G22570,AT1G80840,AT1G21400,AT2G43920,AT2G25810,AT4G15700,AT5G19530,AT3G25930,AT4G18510,AT1G80760,AT2G34620,AT5G54980,AT3G59930,AT3G25190,rps12.1,AT3G46900,AT3G14560,AT4G18590,AT4G10310,AT5G23060,AT4G27520,AT4G14560,AT4G31310,AT5G05140,AT1G23720,AT2G36870,AT1G05010,AT1G36060,AT2G46660,AT4G01250,AT2G29310,AT3G45280,AT1G54740,AT1G10060,AT4G36540,AT1G33440,AT1G33811,AT2G02950,AT4G35720,AT4G37300,AT5G14410,AT1G62500,AT2G33840,AT2G44570,AT5G18600,AT2G40940,AT2G29130,AT3G48720,AT1G17700,AT1G67710,AT1G25320,AT3G61640,AT4G22756,AT1G63260,AT1G28290,AT1G62770,AT5G57785,AT4G30460,AT2G34300,AT5G02200,AT1G63720,AT4G31820,AT2G30010,AT1G75820,AT4G36530,AT2G44160,AT5G26731,AT1G14700,AT4G36780,AT1G21500,AT1G76210,AT2G14100,AT1G62280,AT1G56430,AT2G29980,AT3G54590,AT5G18240,AT3G15820,AT5G48800,AT4G01680,AT3G15850,AT5G66310,AT3G48550,AT1G31330,AT5G14500,AT4G08310,AT5G03150,AT3G22880,AT3G52720,AT5G38970,AT3G62680,AT5G59520,AT3G54890,AT5G16440,AT3G53250,AT4G39720,AT5G51670,AT4G33810,AT1G76100,AT3G62160,AT3G59480,AT1G49660,AT3G06840,AT1G64470,AT1G64460,AT5G54490,AT2G31670,AT5G49960,AT5G51460,AT5G01210,AT2G30600,AT1G06120,AT1G02900,AT3G50640,AT5G52370,AT2G04795,AT1G18880,AT4G21400,AT4G12550,AT2G18300,AT3G61470,AT1G51940,AT1G78460,AT4G37550,AT3G63200,AT4G15390,AT5G66110,AT2G29340,AT2G47930,AT1G13670,AT3G10525,AT1G68110,AT2G26070,AT5G43700,AT5G04860,AT1G53520,AT4G16770,AT3G16770,AT2G38540,AT3G61390,AT1G31050,AT5G14470,AT3G24670,AT1G74500,AT5G15310,AT2G40313,AT2G47270,AT5G59540,AT5G05690,AT2G31750,AT3G11620,AT3G60290,AT3G20790,AT5G14780,AT5G23840,AT1G70100,AT1G68550,AT5G15530,AT1G54200,AT5G58960,AT1G52190,AT5G60720,AT2G17880,AT2G02170,AT2G28470,AT4G29080,AT2G30520,AT1G29660,AT4G02380,AT2G35270,AT4G12880,AT4G16780,AT1G75590,AT3G15440,AT1G60960,AT2G39930,AT5G63510,AT3G49920,AT3G05520,AT2G19970,AT5G53980,AT5G65300,AT5G59890,AT5G35670,AT4G23650,AT4G28190,AT2G32440,AT2G13610,AT3G50560,AT5G37790,AT1G17810,AT1G04310,AT2G39980,AT5G07090,AT5G60530,AT4G05200,AT3G28550,AT4G10060,AT1G59740,AT4G02200,AT1G15910,AT4G04830,AT5G19890,AT5G22700,AT1G67870,AT2G23170,AT2G40540,AT3G07350,AT3G53720,AT5G08415,AT2G14920,AT3G18940,AT3G03040,AT5G44260,AT1G27670,AT5G13280,AT1G12330,AT2G36890,AT1G53000,AT1G51830,AT3G19960,AT2G18400,AT5G18470,AT3G23190,AT5G59090,AT5G49230,AT4G19530,AT4G22930,AT5G03960,AT4G28150,AT3G50660,AT1G80830,AT1G58370,AT4G25620,AT3G55050,AT1G03660,AT3G23880,AT5G49630,AT2G21185,AT1G69690,AT2G41090,AT1G23850,AT3G06460,AT5G11260,AT4G23700,AT3G59900,AT1G50110,AT5G02160,AT1G77670,AT1G24530,AT3G51600,AT5G60400,AT2G30610,AT1G68560,AT3G09800,AT3G60550,AT3G54090,AT5G54510,AT1G12240,AT2G40230,AT5G44110,AT1G05310,AT1G44760,AT5G23050,AT3G56240,AT2G29330,AT1G30570,AT4G18400,AT2G36630,AT1G60710,AT1G08340,AT5G48490,AT5G47800,AT1G26920,AT3G15300,AT1G10550,AT1G76410,AT1G73650,AT3G50440,AT5G07030,AT2G36570,AT2G01940,AT4G16670,AT2G07711,AT1G07280,AT3G25860,AT1G04290,AT1G61360,AT2G22980,AT5G18790,AT2G41310,AT1G52230,AT5G22500,AT1G72180,AT5G56360,AT4G02840,AT5G44210,AT3G18850,AT5G60950,AT3G25560,AT3G25210,AT4G28410,AT2G17230,AT4G19410,AT1G24340,AT3G13845,AT3G16660,AT2G41610,AT2G37280,AT3G48740,AT5G03190,AT1G06210,AT5G18670,AT4G12330,AT3G28860,AT5G57850,AT1G14890,AT5G15740,AT5G27410,AT1G64660,AT5G22440,AT3G50240,AT1G26210,AT4G13950,AT3G18960,AT4G14130,AT4G13640,AT3G62630,AT1G25560,AT2G31085,AT1G31060,AT5G11160,AT4G01590,AT5G03180,AT4G34610,AT2G05160,AT1G70500,AT1G72490,AT3G11210,AT1G11240,AT1G61180,AT2G40670,AT4G24430,AT3G18050,AT1G69700,AT1G26450,AT1G10120,AT5G24840,AT2G17630,AT1G70950,AT3G23520,AT1G23460,AT3G01320,AT2G02450,AT4G26150,AT5G51840,AT2G32540,AT5G11600,AT5G50720,AT3G45210,AT1G56020,AT2G32860,AT1G51110,AT4G15660,AT5G18800,AT1G12260,AT4G11290,AT2G07674,AT4G30993,AT1G65000,AT1G26290,AT3G07410,AT3G55720,AT3G21690,AT1G66980,AT2G41970,AT5G14570,AT5G52450,AT2G24330,AT4G01026,AT2G31260,AT3G52780,AT1G08800,AT1G78310 VERT_BRZ-COL_DN Downregulated in BRZ Col (Table S4 PubmedID:18599455) AT2G16005,AT4G36430,AT1G75900,AT2G21140,AT5G06720,AT3G55940,AT5G44130,AT4G36880,AT2G41480,AT3G14770,AT4G01950,AT1G72140,AT5G04120,AT5G15960,AT4G17470,AT4G30650,AT4G11190,AT1G30760,AT2G18140,AT5G46900,AT4G18280,AT1G03820,AT1G76790,AT3G59010,AT4G26320,AT5G47990,AT2G26760,AT3G46230,AT1G67360,AT2G32190,AT3G21770,AT2G04570,AT3G12580,AT5G52480,AT5G14180,AT2G32210,AT5G53250,AT4G25810,AT1G52830,AT1G30690,AT5G25610,AT1G60030,AT5G38710,AT3G18200,AT2G34070,AT5G35735,AT2G28630,AT2G39700,AT5G41900,AT2G21880,AT1G53540,AT5G59220,AT1G68290,AT1G34750,AT4G22590,AT3G25980,AT1G02400,AT5G65800,AT5G52640,AT2G48130,AT4G15920,AT5G42580,AT5G66390,AT5G23820,AT1G73220,AT1G23800,AT3G12700,AT5G11110,AT4G20320,AT5G17160,AT5G53590,AT4G33260,AT5G26150,AT1G48480,AT1G02800,AT4G17030,AT5G44610,AT3G05490,AT3G61160,AT3G17420,AT5G50200,AT5G43780,AT3G24500,AT4G01430,AT5G64310,AT3G50930,AT4G36110,AT1G07720,AT3G16470,AT2G18210,AT2G39430,AT3G54050,AT5G23400,AT1G20450,AT2G22470,AT1G70470,AT2G39450,AT5G24780,AT5G23860,AT3G04290,AT3G23090,AT1G74310,AT2G02820,AT1G47960,AT2G23110,AT4G28530,AT3G43720,AT4G00360,AT2G30930,AT1G30820,AT1G76540,AT5G25140,AT1G74660,AT2G27140,AT3G59690,AT4G33666,AT2G43050,AT5G20230,AT2G30860,AT3G12110,AT3G12620,AT1G71040,AT1G80240,AT4G28250,AT4G22460,AT3G26170,AT5G01075,AT3G25290,AT2G41380,AT5G02020,AT5G63800,AT1G55210,AT4G31500,AT3G48020,AT5G17980,AT5G52310,AT1G64700,AT3G15540,AT3G51670,AT3G58190,AT3G13650,AT3G02640,AT1G44800,AT1G64610,AT2G30210,AT4G39030,AT5G63450,AT2G38620,AT2G34490,AT1G71380,AT2G34500,AT3G22600,AT1G73120,AT3G11410,AT3G03000,AT5G64770,AT4G21850,AT2G15970,AT1G14350,AT1G10370,AT5G11650,AT3G16850,AT3G61820,AT3G22370,AT1G04140,AT2G33380,AT4G23690,AT1G65310,AT5G12030,AT4G11280,AT3G55840,AT1G35180,AT5G26270,AT4G05190,AT5G61340,AT4G32870,AT1G16060,AT1G59860,AT2G36100,AT1G25400,AT2G25160,AT3G03240,AT5G17850,AT1G72970,AT3G48460,AT4G31910,AT1G29195,AT2G32240,AT5G54160,AT2G47500,AT3G47670,AT2G22330,AT4G37790,AT3G16450,AT5G53190,AT5G64190,AT4G35060,AT3G22400,AT1G02850,AT3G48520,AT4G34710,AT3G20370,AT3G08040,AT1G22530,AT2G43535,AT1G22550,AT1G29980,AT2G17120,AT2G37710,AT1G65840,AT4G01140,AT5G16250,AT5G40690,AT3G10340,AT1G76090,AT3G22620,AT5G58070,AT1G64670,AT1G60190,AT5G62550,AT4G28290,AT1G13930,AT1G20070,AT2G25625,AT1G68880,AT3G19553,AT3G42570,AT2G36220,AT5G03380,AT1G10360,AT3G23920,AT2G41870,AT3G02880,AT1G54120,AT3G52360,AT5G11540,AT1G78290,AT3G56800,AT4G23450,AT5G18970,AT2G18010,AT1G70370,AT2G01610,AT4G37220,AT2G27360,AT5G45670,AT1G79270,AT2G39050,AT1G50490,AT1G28400,AT2G42840,AT1G20440,AT4G18970,AT2G43290,AT4G38860,AT4G28085,AT5G62200,AT1G70270,AT5G05410,AT4G19960,AT5G10210,AT5G06760,AT4G33040,AT1G64380,AT1G72230,AT2G37940,AT5G27350,AT3G54950,AT3G14440,AT1G17060,AT5G49520,AT5G46700,AT1G62570,AT5G15350,AT1G54030,AT5G60660,AT3G19580,AT1G05760,AT1G67750,AT4G11820,AT5G20885,AT5G04340,AT2G22930,AT3G54000,AT3G48350,AT1G73390,AT3G56480,AT2G23120,AT3G15950,AT2G35710,AT3G09350,AT1G30360,AT5G14190,AT2G31945,AT1G31710,AT3G05950,AT5G57800,AT5G22740,AT3G27890,AT1G53690,AT3G63470,AT3G55950,AT5G14640,AT5G62350,AT2G02300,AT2G47260,AT5G13840,AT2G02680,AT1G71740,AT4G37400,AT4G25250,AT1G48260,AT1G55265,AT2G35650,AT1G06520,AT4G17280,AT1G29050,AT1G08560,AT4G00370,AT3G18280,AT3G52370,AT3G09490,AT3G20670,AT4G16515,AT5G08370,AT3G05990,AT5G60200,AT3G03840,AT3G51860,AT4G21830,AT1G62430,AT4G05520,AT1G12845,AT4G30170,AT3G26720,AT1G63440,AT4G00330,AT5G49890,AT1G15210,AT1G70900,AT3G03170,AT1G77450,AT1G53700,AT4G31800,AT2G30550,AT1G08500,AT5G37300,AT3G14190,AT4G09030,AT2G01180,AT2G20750,AT5G23220,AT1G27950,AT3G13430,AT5G24290,AT5G49900,AT4G02280,AT4G32950,AT3G52470,AT1G54010,AT3G48940,AT1G08325,AT5G66230,AT3G60840,AT1G09460,AT5G20150,AT4G28210,AT3G46700,AT1G01470,AT2G17840,AT2G36310,AT3G04060,AT3G53620,AT2G27970,AT5G66260,AT4G37410,AT4G05100,AT1G74410,AT2G37870,AT5G47910,AT4G12510,AT5G41800,AT4G20070,AT4G27860,AT5G06200,AT4G14380,AT1G78070,AT5G41400,AT1G61260,AT5G65040,AT3G09440,AT2G41300,AT5G13700,AT2G48030,AT1G06640,AT5G57610,AT4G23410,AT5G60890,AT3G49840,AT5G02220,AT1G69530,AT2G19880,AT5G20270,AT5G63590,AT3G10320,AT1G18140,AT4G24900,AT2G05940,AT2G22860,AT1G17620,AT3G56370,AT4G37730,AT1G64200,AT1G53140,AT5G57070,AT2G31110,AT1G78060,AT1G30080,AT2G17300,AT1G02730,AT3G23790,AT5G01520,AT5G45340,AT2G41880,AT5G02560,AT1G08990,AT2G23450,AT5G01820,AT1G14370,AT5G51680,AT4G24180,AT1G67940,AT1G73080,AT3G23870,AT1G59660,AT5G10190,AT5G08000,AT5G41080,AT2G27370,AT1G18740,AT3G15210,AT3G08880,AT5G25270,AT4G25640,AT5G63660,AT1G29520,AT5G44060,AT2G41730,AT3G58710,AT1G72800,AT2G25200,AT1G03370,AT5G48450,AT5G47640,AT3G57630,AT2G01150,AT5G12010,AT1G62180,AT3G16340,AT1G08920,AT2G32280,AT3G02210,AT5G63970,AT2G45190,AT5G24580,AT1G73750,AT3G22570,AT5G12840,AT4G13510,AT1G30070,AT3G11750 VERT_BRZ-ARF2_UP Upregulated in BRZ arf2 (Table S4 PubmedID:18599455) AT5G01740,AT2G33790,AT5G22580,AT5G57785,AT2G37030,AT2G32990,AT5G38980,AT4G08040,AT4G12410,AT5G62340,AT3G29410,AT5G10180,AT1G06080,AT3G51400,AT3G30180,AT3G53980,AT3G45160,AT5G57780,AT2G36870,AT5G15180,AT3G53250,AT2G44910,AT5G13910,AT1G43800,AT3G23730,AT1G47600,AT4G37410,AT4G33550,AT1G80760,AT5G67020,AT4G01680,AT5G53830,AT1G73830,AT1G49210,AT3G52720,AT1G48750,AT5G54510,AT4G39800,AT3G46490,AT1G11210,AT5G07030,AT4G03340,AT5G10770,AT4G14560,AT1G69080,AT5G65730,AT2G16060,AT4G22160,AT5G66590,AT5G53980,AT5G04190,AT2G17230,AT5G16030,AT1G05010,AT1G62770,AT2G30070,AT1G67100,AT4G03210,AT3G50660,AT2G25810,AT5G66080,AT1G06120,AT3G01450,AT4G35150,AT1G54200,AT2G28470,AT1G76210,AT4G37300,AT2G21560,AT1G27670,AT5G02200,AT4G37470,AT5G05880,AT1G65310,AT1G65370,AT1G21050,AT5G49630,AT3G48970,AT5G66110,AT3G05400,AT2G43920,AT3G01190,AT2G41050,AT5G55620,AT1G44830,AT5G47800,AT5G51670,AT5G14920,AT3G01680,AT1G64460,AT1G52140,AT1G20190,AT5G01210,AT3G01670,AT3G29030,AT5G38970,AT3G20210,AT4G12880,AT5G15740,AT5G42680,AT5G37790,AT1G03170,AT5G02190,AT1G75500,AT5G17490,AT1G31290,AT1G11190,AT3G18850,AT5G22860,AT5G04530,AT5G12940,AT5G03760,AT1G28290,AT4G19380,AT2G21185,AT2G33810,AT1G63260,AT1G75590,AT5G02760,AT1G36060,AT1G36940,AT1G74500,AT1G47210,AT1G68110,AT3G50750,AT3G62090,AT1G14700,AT5G60520,AT3G63130,AT5G03960,AT2G41090,AT1G33811,AT1G64390,AT1G72610,AT5G51810,AT4G36530,AT3G25830,AT1G64470,AT3G15620,AT2G41800,AT1G76500,AT2G42990,AT3G10080,AT4G31820,AT4G24780,AT4G36360,AT2G05070,AT4G38660,AT1G10640,AT1G62510,AT1G22650,AT1G17700,AT2G05790,AT3G19620,AT1G17180,AT2G42910,AT4G02380,AT4G33960,AT1G68560,AT3G06840,AT5G63180,AT3G51600,AT2G07671,AT3G51895,AT1G06980,AT5G51210,AT3G50890,AT3G62630,AT2G19660,AT3G27690,AT4G17460,AT2G34620,AT2G13610,AT3G18050,AT3G14940,AT1G76620,AT1G19900,AT2G35470,AT3G61640,AT4G36540,AT3G14560,AT5G35670,AT5G24030,AT5G14450,AT2G29980,AT3G03270,AT4G28220,AT5G60950,AT5G44440,AT5G14780,AT5G53370,AT5G07010,AT2G37640,AT5G48485,AT2G17850,AT1G49200,AT5G10400,AT5G51500,AT2G28790,AT4G24340,AT3G53540,AT3G16570,AT1G56430,AT3G02850,AT2G18300,AT3G26610,AT1G77690,AT3G45780,AT1G05020,AT1G52100,AT1G75820,AT4G24480,AT4G35720,AT1G07420,AT4G08950,AT1G11350,orf111d,AT2G24280,AT2G40230,AT2G17880,AT2G25160,AT1G68570,AT2G18290,AT4G04830,AT1G23080,AT3G60700,AT3G02980,AT4G10955,AT1G52190,AT1G62380,AT4G37800,AT2G21050,AT4G38530,AT3G46200,AT1G72180,AT1G49750,AT4G22570,AT1G44760,AT2G29390,AT5G60530,AT1G60630,AT4G32280,AT1G50110,AT2G40900,AT1G62180,AT5G03230,AT2G46660,AT3G28860,AT3G15410,AT3G50440,AT3G01810,AT5G48500,AT1G26920,AT2G46225,AT5G38140,AT2G30510,AT5G59520,AT1G25320,AT1G50710,AT2G37585,AT4G27520,AT2G47930,AT3G56240,AT3G15020,AT2G20390,AT2G20930,AT2G01420,AT4G22490,AT3G15820,AT2G39900,AT4G34160,AT3G59010,AT5G60760,AT1G78000,AT5G45940,AT4G17260,AT5G63660,AT3G54080,AT5G62890,AT5G60670,AT4G36380,AT2G41760,AT1G69690,AT5G26200,AT3G54260,AT4G38690,AT5G44110,AT5G48940,AT1G65570,AT4G10310,AT1G70890,AT1G62360,AT1G68130,AT3G53400,AT5G02540,AT1G06930,AT5G54370,AT4G14130,AT5G09220,AT1G79620,AT5G03190,AT2G26070,AT5G51200,AT5G65280,AT2G25880,AT2G28760,AT4G00730,AT1G31950,AT1G73650,AT4G16060,AT2G17650,AT1G47340,AT4G17770,AT5G66700,AT4G13950,AT2G02130,AT3G50240,AT1G22060,AT3G28050,AT1G75980,AT1G12330,AT1G25560,AT3G23170,AT3G07350,AT1G49660,AT3G06130,AT4G31890,AT2G33370,AT4G12600,AT5G04820,AT4G37110,AT2G39510,AT3G55005,AT5G08100,AT2G04850,AT1G28395,AT3G06680,AT5G27360,AT3G13510,AT5G49960,AT3G46900,AT1G53300,AT1G33750,AT4G19030,AT3G49500,AT5G37660,AT4G16780,AT5G22440,AT1G69700,AT2G29530,AT5G11550,AT3G24150,AT4G33810,AT4G15790,AT4G21326,AT5G40610,AT5G15160,AT3G10610,AT4G35210,AT2G46950,AT1G21710,AT3G10940,AT1G08380,AT5G16000,AT2G40640,AT2G25980,AT1G67040,AT5G66800,AT5G15310,AT1G04290,AT4G25120,AT5G05890,AT5G24300,AT1G80190,AT4G14770,AT3G29375,AT1G12740,AT4G25870,AT5G64940,AT2G47140,AT5G27740,AT4G34610,AT3G51470,AT1G53520,AT2G29310,AT5G13960 VERT_BRZ-ARF2_DN Downregulated in BRZ arf2 (Table S4 PubmedID:18599455) AT1G26380,AT5G57220,AT5G15960,AT4G18280,AT3G46230,AT4G39950,AT1G69920,AT5G20230,AT3G13610,AT1G75900,AT2G30750,AT4G30650,AT5G12030,AT2G16630,AT4G39940,AT3G09350,AT1G14540,AT2G32190,AT2G04040,AT5G52640,AT1G26390,AT2G32210,AT2G34930,AT4G36880,AT1G20070,AT2G29500,AT5G64905,AT2G28630,AT2G26560,AT3G54640,AT3G26830,AT2G21140,AT5G26920,AT5G12020,AT1G59860,AT5G42830,AT2G38860,AT5G44130,AT1G67810,AT1G66690,AT4G22710,AT3G12580,AT2G33380,AT3G04630,AT2G46650,AT4G15490,AT3G16530,AT4G33666,AT3G05950,AT4G37370,AT1G15010,AT2G43000,AT1G67980,AT3G10450,AT2G26530,AT2G41730,AT5G38710,AT2G38870,AT5G58070,AT1G61340,AT2G22330,AT5G66400,AT5G05730,AT3G46670,AT5G51440,AT3G61630,AT5G39580,AT3G22370,AT1G77450,AT5G49520,AT5G13360,AT3G24500,AT2G34070,AT5G06720,AT4G16000,AT4G20320,AT2G04050,AT2G28210,AT4G39670,AT1G26420,AT3G05640,AT4G14365,AT1G02930,AT3G54050,AT5G52310,AT2G21330,AT4G31500,AT2G23120,AT1G10960,AT4G14690,AT1G01470,AT1G30370,AT5G64310,AT5G37670,AT4G28140,AT5G14180,AT2G36790,AT1G14550,AT1G05560,AT4G24150,AT4G26260,AT4G23890,AT1G30760,AT3G55940,AT4G22590,AT2G18690,AT5G05410,AT4G23060,AT5G52570,AT2G22860,AT1G54040,AT2G17660,AT4G34138,AT4G36430,AT5G04120,AT5G02020,AT5G05220,AT4G29780,AT3G23920,AT2G23110,AT2G35930,AT5G47330,AT3G06500,AT1G73480,AT5G59820,AT3G14770,AT5G38900,AT4G32950,AT5G12420,AT4G37290,AT4G01140,AT2G44370,AT1G19180,AT1G56300,AT3G53230,AT5G01600,AT1G19020,AT2G15120,AT2G04570,AT1G74310,AT3G50260,AT5G46050,AT1G55490,AT2G46790,AT5G65040,AT1G15230,AT1G21100,AT1G53690,AT1G71400,AT5G42900,AT4G37400,AT4G25810,AT3G19920,AT2G17840,AT4G37220,AT5G35735,AT2G28400,AT2G28000,AT1G20450,AT2G35980,AT3G54150,AT1G74590,AT2G25200,AT3G50930,AT2G35820,AT1G19610,AT4G15920,AT3G08970,AT1G10370,AT1G72060,AT5G62520,AT4G27070,AT4G01026,AT5G17990,AT5G28430,AT5G64510,AT3G50350,AT1G07440,AT2G27080,AT3G03640,AT5G27420,AT1G74360,AT4G01950,AT2G22470,AT5G59080,AT3G23250,AT5G39110,AT5G17850,AT4G36110,AT4G01310,AT2G33430,AT2G38340,AT4G17490,AT1G12010,AT5G19240,AT4G31240,AT1G56060,AT2G26440,AT5G53250,AT4G20000,AT3G28210,AT1G78070,AT1G24100,AT5G38700,AT3G18250,AT3G56400,AT4G21860,AT5G11920,AT1G55450,AT1G51890,AT1G79680,AT1G61260,AT1G56150,AT5G16970,AT3G09940,AT5G04340,AT5G55180,AT2G40140,AT5G14190,AT1G60190,AT1G56660,AT5G52450,AT4G28085,AT1G55265,AT5G43520,AT5G02490,AT5G44610,AT5G20150,AT1G25400,AT4G32870,AT4G14430,AT2G01610,AT5G41740,AT4G11280,AT2G04400,AT1G71040,AT1G51920,AT4G35985,AT2G45220,AT2G40350,AT3G10340,AT1G09950,AT4G01430,AT1G23710,AT3G21770,AT4G39830,AT5G16010,AT3G49840,AT4G28460,AT5G28630,AT1G16850,AT3G03240,AT1G33110,AT2G47180,AT4G17030,AT1G21680,AT3G09440,AT2G41380,AT5G25260,AT1G62570,AT5G47450,AT2G32120,AT1G10340,AT1G55530,AT4G33050,AT4G18430,AT2G02990,AT4G25100,AT5G14570,AT4G28290,AT1G07690,AT1G57990,AT2G46750,AT4G36500,AT3G47430,AT1G68880,AT1G77950,AT2G29460,AT1G13340,AT1G02400,AT4G12470,AT2G02930,AT5G41080,AT3G04000,AT1G17170,AT3G09410,AT3G56090,AT3G61190,AT2G26760,AT5G03380,AT3G09020,AT5G65800,AT3G62150,AT1G11960,AT1G66880,AT5G19440,AT5G07460,AT5G22300,AT1G78290,AT5G67600,AT3G22800,AT1G30720,AT1G18740,AT2G36770,AT1G61820,AT1G08920,AT1G66160,AT1G23800,AT3G62260,AT2G46600,AT3G12700,AT5G50200,AT2G47600,AT3G46130,AT2G20610,AT3G26170,AT3G14620,AT5G45340,AT5G58570,AT2G37130,AT5G19855,AT2G02680,AT4G20830,AT4G30530,AT1G72430,AT1G22570,AT1G14870,AT3G10300,AT5G16250,AT5G25610,AT2G41480,AT1G76990,AT4G23920,AT1G02850,AT1G64160,AT3G50950,AT1G61360,AT4G23190,AT3G01970,AT5G22060,AT3G58710,AT3G19580,AT5G26655,AT1G09380,AT3G19390,AT3G26720,AT4G00330,AT3G01290,AT1G19380,AT3G46690,AT2G30860,AT1G69890,AT3G45450,AT2G30140,AT1G01120,AT2G20920,AT3G22600,AT3G50650,AT5G49640,AT4G11190,AT5G62360,AT3G22890,AT5G54160,AT2G16900,AT2G39700,AT3G55970,AT4G25200,AT3G43720,AT1G73390,AT4G02410,AT5G59490,AT3G19553,AT5G61190,AT3G48520,AT1G78310,AT2G41110,AT4G17090,AT3G48020,AT2G18140,AT3G63010,AT3G44720,AT1G28380,AT5G47910,AT4G38420,AT1G14810,AT4G17840,AT1G70610,AT1G12200,AT3G54950,AT2G31945,AT4G39640,AT3G46700,AT5G27350,AT2G01180,AT3G48350,AT5G25440,AT2G30490,AT3G25980,AT1G74450,AT3G17770,AT5G60660,AT5G16960,AT2G21880,AT3G07650,AT3G20340,AT5G45670,AT2G35710,AT5G09970,AT4G16260,AT1G55920,AT5G10210,AT1G64380,AT4G26320,AT3G54000,AT4G31800,AT5G12010,AT1G64200,AT5G13200,AT3G04060,AT4G10960,AT1G48330,AT2G40270,AT1G63440,AT4G26120,AT3G48460,AT5G62550,AT1G69930,AT4G39660,AT5G53590,AT1G57630,AT1G01480,AT4G27830,AT3G27210,AT2G28780,AT5G39550,AT1G13210,AT2G27660,AT1G46768,AT2G17300,AT3G09710,AT4G24380,AT2G02820,AT4G39230,AT3G60120,AT4G05190 VERT_ARF2-COL_UP Upregulated in arf2 Col (Table S4 PubmedID:18599455) AT1G26380,AT5G57220,AT3G13610,AT1G66690,AT2G23270,AT4G14630,AT1G14540,AT3G28290,AT5G66400,AT5G12030,AT2G30750,AT1G26390,AT5G43520,AT4G22710,AT2G26560,AT2G16630,AT1G69920,AT5G26920,AT5G64905,AT1G74590,AT3G54640,AT1G15010,AT1G67980,AT3G26830,AT3G30720,AT2G38860,AT1G56300,AT5G10180,AT3G05950,AT5G42830,AT5G48430,AT2G04040,AT2G35980,AT4G39950,AT2G15120,AT3G09350,AT2G43000,AT4G24150,AT2G44370,AT2G02930,AT2G29500,AT1G30370,AT3G59930,AT2G41730,AT1G52690,AT1G02930,AT1G27730,AT2G03760,AT3G46230,AT5G20230,AT2G38870,AT2G27550,AT4G37290,AT2G34930,AT3G05730,AT5G05730,AT2G39510,AT5G09220,AT2G26530,AT4G37370,AT1G73480,AT2G45220,AT1G19610,AT3G05640,AT1G77640,AT1G18970,AT3G22800,AT5G37670,AT4G15490,AT2G33380,AT4G39670,AT1G05560,AT5G39670,AT2G38470,AT1G78460,AT3G18250,AT4G35985,AT4G39940,AT1G55450,AT3G61630,AT1G16030,AT1G59860,AT5G52640,AT5G57890,AT1G20070,AT5G12020,AT1G33790,AT2G32190,AT5G59820,AT5G07460,AT4G18280,AT2G18690,AT1G19020,AT2G35930,AT3G10450,AT4G34138,AT3G23800,AT1G14550,AT1G62280,AT1G51890,AT1G77450,AT3G50260,AT5G05220,AT4G17490,AT1G62510,AT3G05170,AT1G32940,AT1G05680,AT1G26250,AT3G02850,AT3G49840,AT4G04990,AT3G50970,AT1G12010,AT1G56060,AT5G28630,AT4G29780,AT2G36790,AT5G27420,AT1G67810,AT5G17990,AT1G10340,AT5G09530,AT3G62150,AT2G42060,AT1G63560,AT5G46050,AT3G54040,AT1G74360,AT3G12580,AT3G20470,AT3G19920,AT1G05575,AT1G16850,AT1G66880,AT4G36880,AT5G39580,AT4G36500,AT3G04630,AT2G17660,AT5G38900,AT2G39530,AT1G64780,AT1G18980,AT1G21310,AT1G18570,AT5G51440,AT4G01026,AT5G34940,AT1G70170,AT5G04970,AT1G26420,AT4G39640,AT1G61360,AT2G43610,AT5G14570,AT3G54150,AT2G28400,AT4G14365,AT5G01670,AT2G35820,AT5G13360,AT2G15480,AT4G28460,AT4G33666,AT1G19180,AT1G02360,AT4G33050,AT2G40010,AT5G03030,AT5G47070,AT5G52450,AT1G19380,AT4G23890,AT1G22890,AT5G05410,AT1G70810,AT2G29340,AT1G17180,AT1G01470,AT5G52310,AT5G63180,AT5G48540,AT4G36610,AT1G64590,AT4G30650,AT4G27070,AT2G38390,AT5G43450,AT2G04050,AT5G41740,AT3G22370,AT2G28210,AT3G53230,AT4G02330,AT5G02150,AT1G78070,AT4G38440,AT3G46670,AT1G71400,AT4G12550,AT1G51920,AT2G23110,AT2G46650,AT1G61560,AT4G23920,AT2G29130,AT3G14620,AT2G23120,AT3G09940,AT4G37400,AT5G14190,AT2G39920,AT1G75860,AT4G30660,AT3G01970,AT3G03640,AT3G06500,AT4G17215,AT4G13180,AT3G56400,AT1G23830,AT4G25200,AT5G58070,AT1G24140,AT4G20000,AT2G15490,AT2G46750,AT5G39110,AT5G19240,AT2G38340,AT1G58340,AT2G28630,AT3G55980,AT1G61340,AT2G36630,AT2G04400,AT5G01600,AT3G16530,AT3G16120,AT2G32120,AT2G19970,AT2G41070,AT3G62410,AT3G19990,AT4G17370,AT1G72450,AT3G62260,AT1G36640,AT2G32210,AT4G00910,AT4G14430,AT3G47540,AT5G49520,AT2G27660,AT5G62490,AT5G44480,AT1G80840,AT1G55110,AT2G38500,AT4G15550,AT5G11070,AT3G26470,AT3G04520,AT1G23710,AT2G29330,AT1G51360,AT5G06860,AT4G12470,AT4G33540,AT3G61190,AT4G17840,AT3G51000,AT3G24500,AT5G05960,AT3G48920,AT1G15230,AT1G18390,AT3G16440,AT1G74310,AT3G11580,AT5G59720,AT4G27830,AT1G64400,AT3G28930,AT2G40140,AT1G07350,AT2G36930,AT1G72680,AT2G17840,AT2G07140,AT3G09410,AT1G29660,AT1G55530,AT4G01870,AT2G39200,AT4G20830,AT3G28210,AT5G54860,AT1G51790,AT5G63210,AT4G31500,AT3G47430,AT2G29490,AT4G16660,AT2G07698,AT1G14870,AT3G09270,AT5G11210,AT5G44920,AT3G04000,AT5G10300,AT5G02810,AT5G61190,AT5G57300,AT1G53540,AT4G05200,AT5G15130,AT2G30260,AT5G16630,AT4G38080,AT2G29740,AT3G50950,AT3G62090,AT3G23920,AT3G49620,AT2G46440,AT2G38400,AT5G62520,AT4G21320,AT5G62910,AT5G05480,AT1G71730,AT5G57090,AT1G17170,AT1G31100,AT1G49570,AT1G56320,AT5G24030,AT1G48130,AT4G08850,AT1G79680,AT5G39050,AT3G44720,AT1G33110,AT1G20450,AT1G01140,AT1G21680,AT3G50560,AT3G05800,AT4G27300,AT5G48410,AT4G35090,AT5G03490,AT4G31420,AT5G58570,AT5G14180,AT1G02850,AT5G61010,AT1G66160,AT5G38980,AT5G06320,AT4G19960,AT4G02410,AT3G25190,AT1G69930,AT5G55180,AT3G26690,AT5G66440,AT1G52200,AT3G51330,AT2G29470,AT1G22985,AT5G25930,AT5G03310,AT4G28140,AT4G22610,AT1G75240,AT3G14690,AT4G23180,AT3G28740,AT5G67600,AT5G15120,AT5G02260,AT5G24800,AT2G40000,AT1G11960,AT5G59090,AT4G35380,AT2G32020,AT1G74450,AT2G43590,AT1G44130,AT4G23190,AT1G64970,AT2G18680,AT1G01480,AT5G13200,AT3G21790,AT1G13750,AT4G16830,AT1G24340,AT5G25440,AT4G26260,AT5G13310,AT3G59080,AT5G67340,AT5G05300,AT3G08590,AT2G46240,AT3G61390,AT3G23790,AT4G37180,AT5G25260,AT4G17230,AT4G29140,AT5G24470,AT4G01850,AT1G77950,AT2G16900,AT1G18380,AT2G47180,AT3G14660,AT2G46600,AT4G38580,AT1G77480,AT2G32440,AT4G22590,AT3G20340,AT4G10910,AT5G22060,AT3G51890,AT5G19440,AT4G24160,AT1G19530,AT5G51810,AT1G13990,AT5G62150,AT3G08970,AT4G23700,AT4G10070,AT5G12420,AT5G58220,AT1G30070,AT5G63200,AT2G41010,AT4G38550,AT1G11210,AT5G23080,AT2G47730,AT3G46690,AT4G10250,AT1G48750,AT5G59490,AT5G58120,AT3G07600,AT2G04795,AT4G05020,AT2G38820,AT1G22570,AT5G54080,AT2G44380,AT1G08460,AT1G68880,AT1G60170,AT4G30530,AT2G29990,AT2G22880,AT1G43160,AT3G06660,AT3G50900,AT4G18950,AT5G22300,AT1G24150,AT5G61510,AT3G21720,AT1G54890,AT5G59590,AT1G03660,AT3G01290,AT1G27510,AT1G68620,AT1G69890,AT2G35730,AT1G32450,AT1G68690,AT5G40420,AT1G73980,AT2G18300,AT1G64160,AT3G20720,AT1G71695,AT2G30990,AT5G12120,AT2G02390,AT2G01180,AT1G08630,AT3G12490,AT3G54420,AT4G37900,AT3G22480,AT4G31800,AT1G22510,AT5G64180,AT1G01340,AT2G37980,AT5G65650,AT5G60950,AT1G16730,AT1G56600,AT4G02880,AT5G64510,AT3G02860,AT3G10300,AT5G06570,AT1G19130,AT3G27170,AT4G39660,AT5G19890,AT3G60120,AT1G76410,AT1G53520,AT3G20500,AT5G40590,AT1G27760,AT2G25940,AT3G59700,AT2G41710,AT4G26120,AT5G03180,AT2G36770,AT2G47550,AT2G38180,AT5G48480,AT4G15700,AT1G07690,AT1G47980,AT3G60840,AT3G22570,AT3G07410,AT2G25060,AT4G01700,AT5G56720,AT1G75820,AT1G68230,AT2G39290,AT4G27520,AT5G42500,AT1G28470,AT3G16340,AT4G21310,AT1G28010,AT1G73750 VERT_ARF2-COL_DN Downregulated in arf2 Col (Table S4 PubmedID:18599455) AT5G62010,AT5G47990,AT1G55240,AT2G16005,AT2G25160,AT1G43800,AT5G53870,AT5G57785,AT1G65310,AT4G11190,AT4G17470,AT3G29970,AT4G18550,AT5G22460,AT1G02800,AT5G02760,AT5G20740,AT4G37800,AT2G41480,AT4G37410,AT3G22120,AT2G34490,AT5G44130,AT3G04290,AT2G16060,AT1G72610,AT2G02100,AT1G03820,AT3G59010,AT5G24780,AT2G39700,AT5G44580,AT3G42570,AT2G23170,AT4G38660,AT1G62180,AT1G09200,AT5G10770,AT2G18140,AT5G59870,AT4G39800,AT5G02890,AT4G28250,AT4G33550,AT1G76790,AT5G60760,AT5G62000,AT5G57780,AT4G16985,AT1G70850,AT3G62820,AT4G18425,AT3G05400,AT1G33811,AT5G42580,AT1G70470,AT3G20210,AT5G48850,AT3G53250,AT5G26150,AT1G55210,AT4G10240,AT4G29270,AT4G22490,AT5G55620,AT5G57760,AT1G72140,AT4G24780,AT2G21140,AT5G47370,AT4G25780,AT4G26320,AT4G30140,AT4G10270,AT1G67100,AT4G31840,AT3G43190,AT5G48000,AT3G08860,AT1G77120,AT5G51210,AT5G10400,AT4G19420,AT5G48485,AT1G72970,AT5G46240,AT5G46900,AT4G21990,AT3G49750,AT4G04830,AT4G28530,AT5G53190,AT5G06720,AT1G52100,AT1G28400,AT1G05760,AT1G60030,AT2G37630,AT1G68290,AT1G52830,AT5G23820,AT5G66390,AT5G20630,AT5G55730,AT3G17420,AT1G29520,AT4G22460,AT3G01450,AT5G01740,AT1G11670,AT1G78860,AT5G59220,AT5G53370,AT5G44440,AT3G07420,AT3G23090,AT4G35060,AT3G23730,AT2G29620,AT1G15820,AT3G06840,AT2G21220,AT4G11610,AT2G27360,AT4G25420,AT3G58190,AT2G02300,AT1G44760,AT3G51600,AT2G17850,AT5G67020,AT1G44575,AT2G39430,AT5G10100,AT5G62920,AT1G13130,AT1G22590,AT4G08950,AT1G30750,AT5G01075,AT3G51670,AT2G36100,AT5G04200,AT5G26270,AT1G06080,AT5G08000,AT3G25290,AT3G10910,AT5G15350,AT1G72200,AT1G67910,AT2G30210,AT3G56200,AT5G60200,AT5G24580,AT1G15260,AT1G17190,AT1G30380,AT4G11310,AT5G46700,AT4G18970,AT5G13140,AT4G25100,AT4G34160,AT1G80240,AT5G61130,AT2G28790,AT1G75500,AT1G78000,AT5G65360,AT5G16030,AT1G27480,AT3G18200,AT2G27140,AT3G48100,AT3G01500,AT1G22885,AT2G17500,AT4G37445,AT1G76220,AT1G70670,AT5G61340,AT5G14120,AT2G17230,AT1G64700,AT5G19970,AT4G21850,AT4G18570,AT1G28670,AT1G52230,AT2G42990,AT3G63140,AT3G27690,AT2G18210,AT3G18280,AT1G14730,AT2G42840,AT5G23400,AT5G17980,AT3G52370,AT1G77690,AT1G65840,AT2G47260,AT5G42180,AT4G01950,AT5G53590,AT5G52510,AT3G03270,AT1G08990,AT5G18970,AT2G37330,AT4G23670,AT3G14067,AT2G46680,AT3G09160,AT1G79520,AT1G56580,AT3G12110,AT3G54400,AT3G52540,AT1G29490,AT4G37470,AT3G16770,AT1G71740,AT1G55670,AT1G04800,AT2G33210,AT4G08300,AT3G17790,AT5G48500,AT1G18870,AT2G44940,AT5G20885,AT5G04530,AT1G19330,AT1G04770,AT5G54270,AT4G37300,AT1G32540,AT5G01820,AT2G01420,AT3G03840,AT5G02440,AT5G22860,AT5G65640,AT5G10210,AT3G19030,AT2G37620,AT1G68400,AT1G73370,AT5G60670,AT2G02130,AT4G33960,AT2G02820,AT3G16470,AT2G41300,AT4G02090,AT5G35740,AT1G08380,AT1G17200,AT2G32430,AT2G46950,AT3G56370,AT3G45780,AT4G09030,AT1G77700,AT5G60890,AT5G42100,AT2G27370,AT2G22860,AT5G62940,AT4G14130,AT5G37300,AT1G07420,AT4G34220,AT5G01790,AT2G18980,AT2G20080,AT3G52780,AT4G28720,AT1G55260,AT5G63970,AT1G78060,AT4G29720,AT5G40890,AT3G46700,AT5G05290,AT3G10610,AT4G09740,AT1G20020,AT3G28040,AT1G49200,AT5G63140,AT4G39350,AT1G48000,AT1G19670,AT1G60440,AT3G18130,AT4G12600,AT2G33570,AT2G22930,AT5G48360,AT5G37260,AT5G51200,AT5G40630,AT3G27960,AT2G29570,AT5G01090,AT3G23930,AT1G02730,AT1G62990,AT2G19880,AT4G22570,AT3G21370,AT4G01430,AT3G55130,AT1G53300,AT4G39320,AT1G02950,AT3G11690,AT1G19440,AT5G16000,AT1G69770,AT2G30070,AT1G48630,AT3G54750,AT2G21050,AT3G53190,AT1G53140,AT5G50720,AT2G25790,AT2G18290,AT1G49750,AT3G54080,AT5G45940,AT1G55190,AT5G65630,AT1G64200,AT5G02190,AT3G62110,AT5G03760,AT3G57165 GOODWIN_SEEDLINGS_50MM-AL-TREATMENT_UP Up-regulated transcripts in Arabidopsis seedlings in response to 50 ?M Al treatment (Table 2 PubmedID:NA) AT5G24800,AT5G59450,AT4G35840,AT4G19650,AT1G42990,AT2G38470,AT4G37370,AT5G05340,AT3G24170,AT2G02390,AT5G20830,AT5G22850,AT4G25820,AT1G74710,AT3G13772,AT1G03520,AT2G18700,AT4G23920,AT5G67600,AT3G12490,AT5G64080,AT2G43570,AT5G17650,AT4G34150,AT5G55180,AT1G69640,AT1G77120,AT2G22470,AT3G55410,AT2G22780,AT5G52590,AT5G08160,AT3G17410,AT4G17615,AT3G20500,AT1G49300,AT5G47200,AT5G23400,AT5G05010,AT3G52850,AT2G21390,AT1G02530,AT4G02620,AT5G62540,AT5G49570,AT5G20000,AT4G36760,AT4G01320,AT3G53780,AT1G75990,AT5G19140,AT5G35735,AT1G05010,AT3G05510,AT3G44880,AT3G56190,AT2G21620,AT2G26820,AT2G35980,AT2G02010,AT2G19450,AT2G03760,AT1G60420,AT1G09560,AT1G07610,AT3G28960,AT1G69870,AT3G63120,AT3G09840,AT1G32210,AT1G17290,AT5G19550,AT4G23630,AT3G03610,AT3G13310,AT1G80440 GOODWIN_SEEDLINGS_50MM-AL-TREATMENT_DN Down-regulated transcripts in Arabidopsis seedlings in response to 50 ?M aluminum treatment (Table 3 PubmedID:NA) AT1G51070,AT1G10370,AT5G19880,AT5G64120,AT4G13770,AT4G35090,AT2G02130,AT2G45180,AT3G09500,AT3G13750,AT1G12090,AT4G12490,AT5G64740,AT5G62350,AT4G14130,AT4G03210,AT4G38770,AT4G38499,AT3G23730,AT3G14210,AT2G06850,AT1G23410,AT3G51600,AT5G54160,AT3G53260,AT2G37040,AT1G80820,AT5G12860,AT5G39900,AT3G12080,AT3G20820,AT3G16240,AT2G37180,AT3G53420,AT3G26520,AT3G61430,AT1G48750,AT5G54770,AT4G13890,AT2G20490,AT1G54690,AT1G26820,AT5G47700,AT1G41880,AT2G27710,AT2G19730,AT2G39460,AT1G01100,AT1G23290,AT1G78630,AT1G04489,AT1G04270,AT5G24780,AT5G20630,AT5G14910,AT4G25200,AT4G21870,AT3G7230,AT2G43520,AT2G23590,AT1G14980,AT1G01170,AT1G59860,AT1G22690,AT5G60070,AT2G43920,AT5G20720,AT4G26230,AT3G46560,AT2G29530,AT1G32450,AT5G64040,AT5G54270,AT5G54190,AT3G22840,AT3G08940,AT3G16250,AT2G05070,AT1G10960,AT5G23210,AT5G19940,AT5G65870,AT4G34370,AT3G11660,AT3G01500,AT2G01529,AT2G41720,AT1G21460,AT1G17200,AT1G29670,AT1G32470 BRAYBROOK_RNAS-718-LEC2_UP Induced RNAs to 718 LEC2 (Table S2 PubmedID:16492731) AT2G42160,AT2G39680,AT2G33020,AT2G32990,AT2G30640,AT2G32660,AT2G30480,AT2G30400,AT2G33700,AT2G34870,AT2G34920,AT2G34910,AT2G44460,AT2G44440,AT2G40070,AT2G34700,AT2G23630,AT2G30130,AT2G30120,AT2G30840,AT2G32620,AT2G41070,AT2G41020,AT2G41080,AT2G39220,AT2G34450,AT2G39560,AT2G39440,AT2G45870,AT2G45900,AT2G44800,AT2G44730,AT2G44630,AT2G26940,AT2G26150,AT2G22810,AT2G44910,AT2G28960,AT2G29090,AT2G46740,AT2G29740,AT2G35540,AT2G35340,AT2G35300,AT2G47950,AT2G41280,AT2G14610,AT2G29140,AT2G28780,AT2G28880,AT2G39040,AT2G37830,AT2G40770,AT2G06000,ATMG01170,AT2G37430,AT2G18550,AT2G11260,AT2G19560,AT4G00270,AT2G25580,AT2G25690,AT2G01740,AT2G01750,AT2G48090,AT2G48040,AT3G31955,AT2G01300,AT2G24300,AT2G24400,AT2G32020,AT2G13810,AT2G18410,AT2G20400,AT2G42990,AT2G28420,ATMG01190,AT1G23710,AT1G23530,AT1G62460,AT1G62610,AT1G55550,AT1G60590,AT1G61260,AT1G24320,AT1G03700,AT1G03420,AT1G03560,AT1G08730,AT1G61420,AT1G61340,AT1G61400,AT1G23010,AT1G70250,AT1G70000,AT1G09950,AT1G65520,AT1G04650,AT1G09450,AT1G30760,AT1G27370,AT1G77230,AT1G67100,AT1G12100,AT1G03180,AT1G03270,AT1G11850,AT1G70270,AT1G62030,AT1G61840,AT1G67520,AT1G65390,AT1G78995,AT2G31340,AT2G21090,AT2G22530,AT2G36485,AT2G40260,AT2G46400,AT2G21510,AT1G31240,AT1G04310,AT2G25240,AT2G16480,AT2G25330,AT2G21650,AT2G24800,AT2G07687,AT2G31940,AT2G28620,AT2G04070,AT2G11810,AT2G40230,AT2G03840,AT1G65090,AT2G18140,AT2G18180,AT2G07670,AT1G23340,AT1G23240,AT1G75590,AT1G75770,AT1G65730,AT1G79420,AT1G64920,AT1G11730,AT1G20880,AT1G10730,AT1G16390,AT1G14240,AT1G14040,AT1G06520,AT1G31350,AT1G21650,AT1G21740,AT1G72890,AT1G73040,AT1G70985,AT1G74900,AT2G01080,AT1G77810,AT1G52700,AT1G77990,AT1G59650,AT1G35513,AT1G22510,AT1G65870,AT1G65060,AT1G15960,AT1G16040,AT1G11420,AT1G30500,AT1G30550,AT1G30460,AT1G47780,AT1G47840,AT1G18380,AT1G18350,AT1G49780,AT1G01720,AT1G71692,AT1G14690,AT1G14540,AT1G28370,AT1G21130,AT1G53060,AT1G53080,AT1G53090,AT1G26700,AT1G26730,AT1G05910,AT1G19950,AT1G34570,AT1G75450,AT1G62930,AT1G07430,AT1G01390,AT1G17420,AT1G17380,AT1G17330,AT1G26620,AT1G26380,AT1G26420,AT1G26540,AT1G53650,AT1G53640,AT1G12220,AT1G45180,AT1G02460,AT1G43810,AT1G43780,AT1G78310,AT1G49150,AT1G48100,AT1G32430,AT1G08030,AT2G47260,AT1G11090,AT1G10870,AT1G10920,AT1G69820,AT1G74000,AT1G80520,AT1G74210,AT1G74400,AT1G74650,AT1G74600,AT1G74490,AT1G70650,AT1G33960,AT1G78090,AT1G30040,AT1G67980,AT1G68120,AT1G53690,AT1G34360,AT1G74180,AT1G76800,AT1G72250,AT1G49790,AT1G71100,AT1G71060,AT1G55250,AT1G68910,AT1G56345,AT1G56510,AT1G27910,AT1G35280,AT1G35310,AT1G21200,AT1G20550,AT1G12560,AT1G15720,AT1G02390,AT3G03910,AT3G11580,AT3G11460,AT3G01350,AT3G04980,AT3G02140,AT3G03370,AT3G03440,AT3G01830,AT3G10070,AT3G05650,AT3G04620,AT3G07080,AT3G07130,AT3G04020,AT3G11840,AT3G11850,AT3G05920,AT3G09730,AT3G02885,AT3G02860,AT3G02840,AT3G04150,AT3G05980,AT3G06870,AT3G07000,AT3G06620,AT3G02400,AT3G17360,AT3G17340,AT3G22435,AT3G16620,AT3G15370,AT3G15355,AT3G22840,AT3G22670,AT3G26830,AT3G17830,AT3G13900,AT3G21680,AT3G19320,AT3G28420,AT3G18810,AT3G15910,AT3G23100,AT3G27400,AT3G20280,AT1G66480,AT3G09490,AT1G01380,AT1G15640,AT1G16150,AT1G31320,AT1G27060,AT1G04050,AT2G15630,AT2G42140,AT3G14450,AT3G28140,AT3G23740,AT3G28890,AT3G19160,AT3G28600,AT3G21080,AT3G21070,AT3G13420,AT3G29635,AT3G23840,AT3G18640,AT3G22870,AT3G18570,AT3G22180,AT3G21420,AT3G25655,AT3G29400,AT3G30340,AT3G52310,AT3G32260,AT3G22250,AT3G14780,AT3G31415,AT1G33260,AT1G75150,AT1G42580,AT1G66780,AT1G66510,AT1G66450,AT1G72120,AT1G76870,AT1G69523,AT1G50990,AT1G30135,AT1G13580,AT1G18140,AT1G13650,AT1G07260,AT1G07000,AT1G17870,AT1G66950,AT2G33580,AT2G33540,AT1G19900,AT4G10240,AT1G16710,AT1G19940,AT1G25400,AT5G01630,AT4G00670,AT4G00940,AT4G00680,AT4G00850,AT4G01190,AT4G01630,AT4G01460,AT4G01770,AT4G02070,AT4G02410,AT4G03050,AT4G03270,AT4G04460,AT4G04220,AT2G12685,AT4G07400,AT4G08160,AT4G09840,AT4G09710,AT4G09900,AT4G10850,AT4G11840,AT4G12010,AT4G12640,AT4G12910,AT4G18050,AT4G13710,AT4G18425,AT4G18890,AT4G19430,AT4G19240,AT4G19230,AT4G20310,AT4G20050,AT4G21200,AT4G21300,AT4G21880,AT4G22020,AT4G22050,AT4G22560,AT4G23000,AT4G22960,AT4G23720,AT4G24110,AT4G24100,AT4G24970,AT4G25020,AT4G25150,AT4G25140,AT4G25350,AT4G25270,AT4G25750,AT4G26200,AT4G27370,AT4G27140,AT4G27170,AT4G27160,AT4G27150,AT4G27640,AT4G27590,AT4G27540,AT4G27460,AT4G27654,AT4G28085,AT4G28520,AT4G28703,AT4G29170,AT4G29740,AT4G30410,AT4G31400,AT4G32105,AT4G32800,AT4G32810,AT4G33180,AT4G33160,AT4G33440,AT4G34310,AT4G34430,AT4G35720,AT4G35590,AT4G35550,AT4G37480,AT4G36290,AT4G38090,AT4G39070,AT4G39030,AT4G39530,AT3G42670,AT3G43280,AT3G46110,AT3G47400,AT3G47890,AT3G47570,AT3G48090,AT3G48850,AT3G49620,AT3G50420,AT3G52490,AT3G52640,AT3G53350,AT3G53240,AT3G53690,AT3G53440,AT3G54000,AT3G53810,AT3G54100,AT3G54930,AT3G54950,AT3G54940,AT3G55020,AT3G55370,AT3G56300,AT3G56400,AT3G56590,AT3G57120,AT3G58630,AT3G58800,AT3G58540,AT3G59430,AT3G59010,AT3G59630,AT3G60200,AT3G60040,AT3G60110,AT3G60420,AT3G60580,AT3G60680,AT3G60660,AT3G60410,AT3G61140,AT3G61800,AT3G62260,AT3G62100,AT3G62580,AT3G62690,AT5G01300,AT5G01380,AT5G01970,AT5G01540,AT5G02420,AT5G02630,AT5G03140,AT5G03130,AT5G03720,AT5G04050,AT5G03930,AT5G03870,AT5G04480,AT5G05570,AT5G05430,AT5G05790,AT5G06810,AT5G06670,AT5G07560,AT5G07550,AT5G07990,AT5G09970,AT5G10100,AT5G11230,AT5G10900,AT5G11320,AT5G11410,AT5G12160,AT5G12100,AT5G11890,AT5G13220,AT5G13790,AT5G13590,AT5G14230,AT5G14180,AT5G15130,AT5G14620,AT5G16600,AT5G17350,AT5G17370,AT5G17980,AT5G17850,AT5G17780,AT5G18360,AT5G18550,AT5G18540,AT5G18920,AT5G18950,AT5G22390,AT5G19260,AT5G22870,AT5G22550,AT5G22540,AT5G22890,AT5G23520,AT5G23460,AT5G23580,AT5G24330,AT5G24130,AT5G24110,AT5G24530,AT5G24600,AT5G24420,AT5G35520,AT5G37590,AT5G37660,AT5G38310,AT5G38240,AT5G38700,AT5G38610,AT5G38900,AT5G39785,AT5G39670,AT5G40460,AT5G40420,AT5G40910,AT5G41330,AT5G41280,AT5G41920,AT5G41740,AT5G42060,AT5G42690,AT5G42830,AT5G43490,AT5G43180,AT5G43160,AT5G43500,AT5G43820,AT5G43670,AT5G43860,AT5G43745,AT5G44120,AT5G43920,AT5G45340,AT5G45560,AT5G45540,AT5G45830,AT5G46470,AT5G46460,AT5G46740,AT5G47460,AT5G47230,AT5G47740,AT5G47600,AT5G47960,AT5G49330,AT5G50130,AT5G50700,AT5G50530,AT5G50320,AT5G50450,AT5G51190,AT5G51570,AT5G52020,AT5G52050,AT5G52030,AT5G52250,AT5G52580,AT5G53280,AT5G53210,AT5G54120,AT5G54260,AT5G54850,AT5G54740,AT5G55370,AT5G55250,AT5G55470,AT5G55790,AT5G55640,AT5G56300,AT5G56230,AT5G57090,AT5G56980,AT5G57530,AT5G58770,AT5G59510,AT5G59680,AT5G60220,AT5G59845,AT5G60730,AT5G60760,AT5G62520,AT5G62620,AT5G63480,AT5G63450,AT5G63830,AT5G64510,AT5G64530,AT5G65120,AT5G65790,AT5G66100,AT5G66350,AT5G66640,AT5G66710,AT5G67210,AT5G67060,AT5G67390,AT5G24970,AT5G25480,AT5G25580,AT5G26180,AT5G26040,AT5G26920,AT5G26770,AT5G27320,AT5G27420,AT5G27440,AT1G31710,AT5G14960,AT5G16200,AT5G16100,AT5G17600,AT5G17410,AT5G16960,AT1G57630,AT1G57560,AT1G58110,AT1G16650,AT3G56730,AT1G16640,AT1G31920,AT3G56690,AT4G36700,AT4G37150,AT1G31814,AT4G37170,AT5G21050,AT5G19920,AT5G20360,AT5G20480,AT5G20640,AT5G19840,AT1G26330,AT1G58420,AT1G58410,AT1G38131,AT1G33610,AT1G44100,AT1G73360,AT5G04310,AT1G56660,AT1G28190,AT1G56540,AT4G14390,AT4G14970,AT4G14770,AT4G14730,AT4G15330,AT4G15690,AT4G17310,AT4G17760,AT4G16850,AT4G15010,AT4G16563,AT4G25540,AT1G08410,AT2G47460,AT2G23180,AT2G23200 LEE_FLU_WT_UP Up-regulated at least 2-fold in flu versus wild type, ex1/flu versus wild type, ex2/flu versus wild type, and ex1/ex2/flu versus wild type (Data Set 1 PubmedID:17540731) AT2G26190,AT2G40000,AT2G44080,AT2G41010,AT2G38470,AT2G30040,AT2G25735,AT2G25900,AT2G29420,AT2G27830,AT2G35710,AT2G01180,AT2G32020,AT2G28400,AT2G36790,AT1G23710,AT1G24140,AT2G17880,AT1G61340,AT1G62300,AT1G65390,AT2G35930,AT2G36220,AT2G46400,AT2G40140,AT1G05560,AT1G16420,AT1G72900,AT1G01720,AT1G21110,AT1G21120,AT1G28480,AT1G32920,AT1G19770,AT1G21910,AT1G78410,AT1G19380,AT1G55920,AT1G11050,AT1G72520,AT1G63750,AT1G30040,AT1G76360,AT1G76650,AT1G76690,AT1G29690,AT1G77450,AT1G13260,AT3G05200,AT3G01830,AT3G04640,AT3G08720,AT3G02840,AT3G16720,AT3G23230,AT3G18690,AT3G18710,AT3G02800,AT3G19580,AT3G25600,AT3G28340,AT1G66090,AT1G66160,AT3G10930,AT1G20823,AT1G17860,AT2G33580,AT4G01250,AT4G01870,AT4G02200,AT4G02410,AT4G11280,AT4G13180,AT4G18880,AT4G21510,AT4G21990,AT4G23190,AT4G23810,AT4G24160,AT4G26400,AT4G30280,AT4G31550,AT4G31800,AT4G34138,AT4G37610,AT3G44190,AT3G45640,AT3G46110,AT3G46600,AT3G48650,AT3G49530,AT3G50930,AT3G55840,AT3G57450,AT3G57530,AT5G01540,AT5G05300,AT5G05410,AT5G09800,AT5G22920,AT5G24110,AT5G41740,AT5G42380,AT5G43170,AT5G44070,AT5G46710,AT5G47220,AT5G47910,AT5G48540,AT5G49520,AT5G52750,AT5G54720,AT5G57220,AT5G57560,AT5G58430,AT5G59550,AT5G59730,AT5G61590,AT5G61440,AT5G61900,AT5G62570,AT5G64870,AT5G65300,AT5G66210,AT5G26920,AT5G27420,AT5G14730,AT3G56710,AT3G56880,AT4G36500,AT1G73540,AT1G35140,AT4G17460,AT4G15550,AT4G17500,AT2G41640,AT3G61060,AT5G62280,AT2G30610,AT2G39570,AT2G29670,AT2G45170,AT2G32150,AT2G05540,AT2G20670,AT1G60740,AT1G10070,AT1G70290,AT1G54740,AT1G03090,AT1G23870,AT1G80920,AT1G79700,AT1G02660,AT1G06160,AT1G49170,AT1G11080,AT1G69910,AT1G71030,AT3G07590,AT3G10020,AT3G06850,AT3G15450,AT3G30775,AT3G22060,AT3G13450,AT3G18560,AT1G72060,AT1G17990,AT1G25400,AT4G03510,AT4G05070,AT4G21480,AT4G35770,AT3G45300,AT3G47340,AT3G49160,AT3G49790,AT3G54500,AT3G57020,AT5G05440,AT5G07100,AT5G12010,AT5G19120,AT5G49450,AT5G52250,AT5G56100,AT5G58650,AT5G67420,AT5G16110,AT4G36670,AT5G20250,AT5G21170,AT5G28770,AT1G28330,AT2G23320,AFFX-AThal-25SrRNA,AT2G19440,AT1G34310,AT1G29440,AT3G11210,AT5G08600,AT5G23270,AT5G35480,AT2G41890,AT2G23810,AT2G47060,AT2G29490,AT2G01150,AT2G32190,AT2G32210,AT2G15480,AT2G07707,AT1G55450,AT1G70420,AT2G22500,AT2G36950,AT1G59910,AT1G64700,AT1G21820,AT1G59590,AT1G63480,AT1G14370,AT1G44830,AT1G19970,AT1G07520,AT1G17380,AT1G68330,AT1G69890,AT1G69880,AT1G63720,AT1G67530,AT1G66400,AT1G68110,AT1G72260,AT1G42980,AT1G19020,AT1G02400,AT3G10720,AT3G06890,AT3G16700,AT3G21260,AT3G25780,AT1G43000,AT2G26020,AT3G21070,AT3G19030,AT3G16860,AT1G66080,AT1G66500,AT1G51700,AT1G19180,AT1G22190,AT4G02330,AT4G12720,AT4G23180,AT4G30290,AT4G33980,AT4G33960,AT4G34150,AT4G34135,AT4G34410,AT4G35480,AT4G38940,AT4G39670,AT3G46020,AT3G59080,AT3G60290,AT3G61640,AT5G03380,AT5G12940,AT5G17350,AT5G37770,AT5G39670,AT5G40540,AT5G41100,AT5G40920,AT5G42900,AT5G44420,AT5G46910,AT5G48655,AT5G49480,AT5G52760,AT5G59450,AT5G59820,AT5G62020,AT5G64310,AT5G64660,AT5G66070,AT5G25170,AT5G26030,AT5G16200,AT5G17000,AT1G57990,AT1G58420,AT1G44100,AT1G73330,AT4G15680,AT4G17250,AT4G17230,orf240a,AT2G33860,AT3G15400,AT3G21560,AT3G49870,AT5G37300,AT5G57880,AT2G39650,AT2G30020,AT2G32030,AT1G65400,AT2G24600,AT1G72940,AT1G72920,AT1G80840,AT1G27730,AT1G68840,AT1G76600,AT1G77640,AT1G18570,AT4G24380,AT4G24570,AT4G27280,AT4G29780,AT4G37290,AT3G46620,AT3G48360,AT3G50060,AT3G55980,AT3G61190,AT3G62950,AT5G22250,AT5G45340,AT5G47960,AT5G53830,AT5G54490,AT5G63790,AT5G28630,AT1G35210,AT1G73500,AT5G04340,AT2G26530,AT3G09540,AT3G16175,AT5G24780,AT2G20870,AT1G05575,AT3G28500,AT3G44260,AT5G51190,AT5G61600,AT5G66650 LEE_FLU_EX1EX2FLU/WT_UP Upregulated genes only in flu and ex1ex2flu vs wt (Data Set 1 PubmedID:17540731) AT2G19800,AT3G57520,AT5G41080,AT5G59310,AT5G60910 WANG_DURING-PG_UP Up-regulated more than 1.6-fold during PG (Table S2 PubmedID:18775970) AT1G74450,AT1G74310,AT3G24500,AT1G14200,AT5G12030,AT3G46230,AT5G56030,AT1G54050,AT1G09100,AT5G52640,AT2G29500,AT1G53540,AT3G56090,AT5G35320,AT5G25450,AT3G52450,AT3G04640,AT1G76640,AT2G46240,AT5G05410,AT1G01720,AT5G59720,AT4G12400,AT5G02770,AT5G04760,AT5G23530,AT5G35380,AT1G16030,AT3G28210,AT1G59860,AT5G12020,AT3G49530,AT5G62520,AT3G28340,AT5G10695,AT2G20560,AT1G60040,AT1G56660,AT5G37230,AT3G19690,AT3G14200,AT2G41060,AT3G19240,AT2G33120,AT5G48570,AT1G50740,AT3G07490,AT5G67530,AT5G11740,AT3G16130,AT1G09070,AT2G21430,AT3G12580,AT2G25630,AT4G24570,AT3G25230,AT5G20340,AT3G20670,AT5G65630,AT1G67360,AT3G62010,AT1G63630,AT1G07350,AT5G42260,AT1G59910,AT1G51060,AT3G05770,AT5G58070,AT3G01320,AT4G10250,AT1G09575,AT3G55500,AT5G19900,AT3G12050,AT5G63330,AT2G35930,AT5G20330,AT2G23120,AT4G30390,AT3G52590,AT5G63130,AT3G15460,AT5G28540,AT5G18400,AT3G26870,AT2G40000,AT5G67250,AT1G20220,AT4G34630,AT1G18540,AT3G07030,AT5G38450,AT1G56200,AT2G17660,AT3G27880,AT4G30490,AT5G66230,AT3G10300,AT2G38520,AT5G10550,AT3G14075,AT2G25460,AT4G39860,AT4G12980,AT5G57240,AT4G28670,AT1G59660,AT2G44200,AT5G11680,AT2G18440,AT2G37970,AT1G47570,AT3G59680,AT4G28290,AT4G20500,AT5G44060,AT4G33940,AT3G44050,AT1G12840,AT4G01100,AT5G45700,AT1G07140,AT5G12180,AT5G19310,AT1G71380,AT1G07210,AT1G17790,AT3G53680,AT2G22500,AT5G47120,AT4G11280,AT1G69840,AT5G04040,AT5G56000,AT5G66750,AT3G25600,AT3G09350,AT3G14720,AT3G10800,AT5G59420,AT1G34460,AT3G11880,AT4G08590,AT1G79360,AT1G77390,AT3G46620,AT3G20770,AT4G29670,AT5G61620,AT5G63370,AT1G03070,AT2G42010,AT5G27610,AT2G25850,AT2G42030,AT1G07360,AT4G32620,AT2G01600,AT5G19290,AT1G27970,AT1G76110,AT3G26618,AT5G10950,AT5G06370,AT1G77220,AT2G37410,AT3G04360,AT2G33410,AT4G39260,AT5G49480,AT3G13350,AT2G19440,AT1G53210,AT3G44110,AT2G44450,AT1G08860,AT5G58760,AT5G58190,AT3G08970,AT4G29450,AT3G48440,AT2G37470,AT2G37540,AT5G16100,AT1G75870,AT1G63180,AT3G54130,AT2G38500,AT2G42330,AT4G16100,AT5G24660,AT2G25250,AT5G07810,AT2G42270,AT5G62740,AT2G44190,AT4G16480,AT5G65480,AT4G24630,AT4G02060,AT1G18260,AT5G09250,AT3G53230,AT2G27050,AT1G13195,AT5G16780,AT1G52500,AT1G06770,AT2G06040,AT5G45350,AT4G39610,AT2G44310,AT1G77250,AT3G48360,AT3G03490,AT2G44590,AT2G22600,AT1G69750,AT1G31910,AT1G70590,AT5G13700,AT1G66260 WANG_DURING-PG_DN Dwon-regulated more than 1.6-fold during PG (Table S2 PubmedID:18775970) AT1G35490,AT1G32300,AT5G39870,AT5G03690,AT2G19000,AT4G11760,AT1G63060,AT3G05820,AT3G23210,AT4G18395,AT5G20150,AT1G04760,AT3G22650,AT3G06330,AT1G61700,AT1G69935,AT1G01360,AT5G36250,AT3G27290,AT1G73630,AT2G20430,AT1G54130,AT5G39310,AT5G55990,AT3G28980,AT3G10460,AT2G22740,AT5G15950,AT4G17690,AT2G28590,AT4G28680,AT5G07420,AT3G54580,AT4G28000,AT5G10650,AT2G45610,AT2G01260,AT4G29950,AT3G52540,AT2G19330,AT1G67290,AT3G23610,AT2G19010,AT1G57550,AT4G17070,AT5G22600,AT1G19100,AT3G06830,AT5G19000,AT3G28780,AT5G25880,AT2G28080,AT1G43630,AT4G34340,AT5G15100,AT3G57140,AT1G70420,AT3G48570,AT4G16500,AT3G10470,AT5G24940,AT1G26320,AT5G38820,AT4G15980,AT1G51915,AT3G47130,AT2G36880,AT4G01070,AT1G68090,AT1G78940,AT2G18160,AT5G49450,AT4G12930,AT1G03550,AT5G04390,AT4G37610,AT2G10970,AT3G20200,AT5G11520,AT1G53500,AT5G66740,AT3G17790,AT3G01620,AT3G54240,AT2G28640,AT2G33350,AT1G16760,AT4G28150,AT1G80460,AT4G35070,AT5G01690,AT2G35210,AT5G17480,AT3G26000,AT1G06970,AT5G24655,AT5G65890,AT5G27980,AT3G03250,AT3G57390,AT5G13820,AT4G31220,AT1G17710,AT1G79975 WANG_DURING-PTG_UP Up-regulated more than 1.6-fold during PTG (Table S2 PubmedID:18775970) AT5G08480,AT5G22910,AT5G06170,AT5G09280,AT4G34600,AT5G10520,AT4G37710,AT2G34180,AT2G28820,AT3G19940,AT1G62180,AT1G07860,AT3G25760,AT5G03810,AT2G44690,AT3G02125,AT2G31550,AT1G73080,AT5G37810,AT5G64310,AT5G15560,AT3G44910,AT4G37260,AT5G40690,AT1G64380,AT5G26220,AT1G01550,AT3G13662,AT4G39640,AT5G61210,AT5G39200,AT4G20990,AT1G34750,AT5G11820,AT2G28170,AT3G43550,AT5G22400,AT1G32640,AT4G04480,AT2G38870,AT2G32150,AT3G48690,AT5G36720,AT3G09830,AT3G18000,AT5G35380,AT3G09540,AT4G29780,AT4G25040,AT3G12800,AT4G23070,AT5G11740,AT1G24100,AT2G24460,AT2G28120,AT3G27960,AT5G08520,AT5G06320,AT1G63530,AT3G15860,AT3G19930,AT5G22900,AT3G60140,AT1G18280,AT1G67340,AT3G57040,AT3G44900,AT4G26830,AT1G09720,AT5G64870,AT2G23810,AT4G12980,AT1G18510,AT3G22370,AT3G26870,AT2G07020,AT5G13040,AT3G26910,AT5G52760,AT5G58620,AT2G31910,AT1G19180,AT1G72760,AT5G54110,AT3G24550,AT1G78000,AT2G30310,AT5G64905,AT2G21430,AT1G32920,AT2G44500,AT4G24900,AT2G35740,AT5G41800,AT1G31770,AT1G24120,AT2G35930,AT4G18070,AT4G21323,AT1G66220,AT5G45750,AT4G02160,AT5G49480,AT2G44360,AT5G66650,AT5G46780,AT3G53790,AT5G20310,AT1G24170,AT1G60420,AT4G20260,AT4G38390,AT4G37370,AT3G53620,AT1G53010,AT4G16480,AT3G26510,AT2G37970,AT5G57760,AT3G24790,AT5G01680,AT2G38480,AT1G12320,AT3G14180,AT2G05160,AT5G01810,AT1G59650,AT5G09370,AT2G01180,AT2G04305,AT1G12490,AT3G18690,AT5G46200,AT1G29230,AT2G29720,AT3G50060,AT1G54100,AT1G74990,AT5G13200,AT5G13220,AT3G04530,AT1G79360,AT2G37540,AT1G15010,AT5G01490,AT4G08670,AT2G23150,AT5G16300,AT5G45650,AT1G36370,AT1G04770,AT1G71380,AT3G55500,AT5G48850,AT1G30135,AT3G52400,AT1G21750,AT1G10150,AT5G42260,AT5G55610,AT3G60260,AT5G17190,AT3G52340,AT5G26100,AT3G19690,AT4G35710,AT1G28220,AT3G46220,AT3G25250,AT1G52250,AT1G50740,AT5G41100,AT2G28830,AT3G11780,AT2G41640,AT3G12920,AT1G29770,AT1G30860,AT1G70140,AT3G58120,AT1G72150,AT1G75600,AT3G55730,AT1G17440,AT4G26440,AT4G34230,AT2G25110,AT5G02500,AT2G19440,AT2G40500,AT2G17840,AT5G61790,AT5G40260,AT5G53820,AT3G01430,AT1G76180,AT5G24660,AT1G02820,AT5G59820,AT1G12780,AT3G59460,AT5G23530,AT1G67640,AT2G34500,AT2G34920,AT2G21510,AT3G04120,AT4G34630,AT3G16130,AT2G15480,AT2G23120,AT5G20340,AT4G30500,AT1G78070,AT4G28290,AT2G22910,AT1G18370,AT2G39440,AT1G76310,AT1G01650,AT1G27620,AT5G61140,AT2G44310,AT5G14470,AT5G62550,AT1G29690,AT5G16010,AT1G48120,AT3G52060,AT2G14110,AT5G03080,AT5G37770,AT5G55020,AT2G33120,AT4G27280,AT1G72450,AT5G62740,AT4G18950,AT2G23290,AT3G05770,AT5G02290,AT2G38940,AT3G09590,AT4G21060,AT3G56540,AT4G01190,AT1G67670,AT5G49180,AT1G29200,AT4G25390,AT1G69840,AT1G26360,AT4G16470,AT5G24030,AT3G23630,AT3G12790,AT1G09575,AT3G45640,AT4G18050,AT3G61640,AT2G46600,AT1G15860,AT4G39890,AT1G29550,AT2G30630,AT4G35985,AT2G01920,AT3G06500,AT1G54450,AT1G74230,AT4G13190,AT2G41420,AT3G23750,AT5G53590,AT5G02780,AT1G12030,AT4G32350,AT4G10280,AT1G47220,AT1G42470,AT3G60580,AT2G36850,AT5G02730,AT3G17630,AT5G67250,AT5G66430,AT1G15990,AT5G55400,AT1G22530,AT3G03160,AT3G10300,AT1G24140,AT5G28540,AT2G30500,AT2G34790,AT1G09080,AT1G63180,AT1G58440,AT2G39900,AT1G77510,AT2G33580,AT2G39650,AT1G35490,AT5G63600,AT2G25250,AT1G01450,AT1G13195,AT3G58600,AT3G51160,AT3G26744,AT4G37990,AT1G56340,AT1G72280,AT3G18820,AT2G45710,AT5G19290,AT3G42850,AT4G08850,AT4G17090,AT4G34135,AT5G05850,AT5G61640,AT1G53210,AT3G22910,AT3G30180,AT3G52590,AT2G16280,AT3G09300,AT5G03530,AT3G46440,AT1G74380,AT2G30550,AT1G67540,AT2G25070,AT3G26880,AT1G56540,AT4G25680,AT5G07710,AT1G78280,AT1G49950,AT2G26570,AT3G57280,AT5G59290,AT5G52590,AT1G74950,AT2G42010,AT5G48570,AT5G41685,AT3G52930,AT4G20780,AT3G09440,AT2G38760,AT2G43330,AT5G62520,AT4G32600,AT5G49460,AT2G29550,AT5G46295,AT3G09350,AT5G23090,AT5G50400,AT3G57890,AT3G52450,AT5G59420,AT3G07490,AT3G23410,AT2G38700,AT1G06870,AT5G54860,AT1G09180,AT5G26718,AT5G26595,AT3G62770,AT4G21990,AT3G60010,AT1G19940,AT5G64660,AT3G58730,AT2G03040,AT3G12580,AT1G45145,AT1G64800,AT5G20690,AT4G14365,AT4G31870,AT2G38920,AT1G71190,AT1G56330,AT5G40645,AT2G44450,AT3G10470,AT1G63500,AT5G61620,AT1G67360,AT1G59860,AT1G74330,AT1G70780,AT4G33150,AT1G11940,AT1G07040,AT4G10790,AT4G23010,AT5G24650,AT2G19040,AT5G51430,AT2G22290,AT3G27410,AT5G13490,AT1G52740,AT1G01360,AT5G52210,AT4G24830,AT2G17280,AT3G11700,AT1G23710,AT2G33150,AT1G20270,AT5G16240,AT3G62720,AT4G01090,AT1G80450,AT2G35890,AT3G07390,AT3G25600,AT5G25400,AT5G65110,AT2G18890,AT5G44370,AT1G20550,AT3G24350,AT5G11700,AT1G50890,AT3G44700,AT3G25040,AT4G39860,AT4G31580,AT4G04610,AT2G46520,AT3G46450,AT4G17615,AT1G55330,AT5G42890,AT2G18730,AT5G56000,AT2G36300,AT2G38340,AT1G78050,AT3G17860,AT1G06450,AT5G20330,AT2G23320,AT4G24570,AT3G14430,AT5G47080,AT5G02490,AT5G01180,AT5G24655,AT4G12790,AT2G17660,AT3G16175,AT1G54710,AT2G35690,AT4G14270,AT1G71950,AT1G15130,AT2G22860,AT1G21900,AT2G20130,AT5G11390,AT3G43810,AT3G52570,AT1G13120,AT4G11280,AT5G17850,AT3G48140,AT2G40590,AT4G28050,AT3G18215,AT1G25988,AT1G01440,AT1G10650,AT5G20650,AT1G01260,AT1G78570,AT1G74450,AT5G12030,AT1G19380,AT4G13800,AT5G15870,AT4G24380,AT3G12490,AT1G53910,AT5G57890,AT1G54050,AT5G49420,AT1G58210,AT3G22570,AT1G73010,AT2G21650,AT1G16030,AT4G23950,AT3G01120,AT2G40880,AT4G17530,AT1G59660,AT4G25950,AT3G16620,AT4G09670,AT3G55940,AT3G54170,AT4G22820,AT5G49580,AT3G61070,AT1G43890,AT3G14800,AT4G21810,AT4G34150,AT3G17390,AT3G50360,AT3G05620,AT1G75610,AT4G15120,AT1G78320,AT1G15380,AT5G61810,AT3G07230,AT3G23270,AT3G06420,AT3G22880,AT3G62590,AT5G28040,AT4G11220,AT3G27020,AT2G27260,AT3G01520,AT1G05500,AT5G04390,AT5G26030,AT2G03050,AT3G61380,AT2G02860,AT5G20900,AT2G45140,AT5G13190,AT1G30640,AT4G13890,AT3G24840,AT4G25940,AT2G26540,AT4G15830,AT3G58680,AT5G12020,AT5G40650,AT4G11600,AT4G05020,AT3G57070,AT1G03070,AT3G04810,AT4G01470,AT4G32140,AT1G60440,AT4G13010,AT3G03600,AT1G11910,AT3G58750,AT1G73730,AT4G34390,AT5G53250,AT1G07890,AT4G09150,AT5G47120,AT1G59910,AT5G08290,AT2G16430,AT3G01780,AT3G25230,AT3G49530,AT4G08320,AT1G28250,AT2G17410,AT3G46900,AT1G23870,AT5G44860,AT5G51600,AT1G09600,AT2G41830,AT1G14360,AT2G40790,AT1G44960,AT5G52200,AT3G50530,AT3G12400,AT5G42150,AT1G13960,AT5G53000,AT1G68090,AT4G29670,AT1G72630,AT3G59050,AT1G80460,AT5G10695,AT2G17290,AT1G48440,AT1G20110,AT1G09070,AT3G02850,AT2G17520,AT4G08170,AT2G29500,AT2G03630,AT1G27970,AT2G39990,AT4G23960,AT3G15020,AT4G27680,AT2G03840,AT5G58290,AT1G69720,AT2G18700,AT3G05500,AT2G29620,AT3G53520,AT3G45240,AT5G24380,AT1G03550,AT4G24920,AT4G12860,AT3G61130,AT5G38450,AT4G07390,AT1G47830,AT4G15093,AT5G66760,AT4G30550,AT1G17280,AT3G57520,AT4G21326,AT5G64230,AT4G26770,AT3G18780,AT3G47550,AT1G61080,AT1G73510,AT3G51090,AT4G39850,AT5G56190,AT1G22930,AT4G13450,AT5G40930,AT5G02170,AT4G31860,AT5G16050,AT1G53540,AT4G30490,AT1G74860,AT1G62320,AT4G15650,AT2G37070,AT1G60040,AT5G08530,AT5G20010,AT3G57090,AT3G28340,AT2G04220,AT5G45350,AT2G21880,AT4G15415,AT5G46860,AT1G22140,AT2G02230,AT4G08960,AT4G33190,AT1G25370,AT3G11880,AT5G58070,AT1G48880,AT5G36220,AT5G01730,AT1G72800,AT4G28670,AT1G76640,AT2G19350,AT1G50990,AT5G63050,AT1G79270,AT4G38470,AT4G26470,AT3G16320,AT1G54130,AT1G21080,AT2G29940,AT5G13240,AT5G64990,AT1G05630,AT1G67850,AT4G37120,AT1G30620,AT1G62820,AT4G22270,AT5G51050,AT5G60070,AT4G13270,AT3G47780,AT2G19800,AT5G56230,AT2G44540,AT1G18530,AT2G13620,AT5G25770,AT2G46505,AT2G17720,AT5G07840,AT4G17870,AT1G68750,AT1G78790,AT2G33350,AT5G19310,AT3G07090,AT5G56870,AT2G30020,AT5G35390,AT5G15640,AT1G73070,AT1G06540,AT2G23080,AT2G06530,AT3G29170,AT5G13810,AT1G55410,AT2G30110,AT4G28990,AT5G19070,AT5G20300,AT1G78380,AT4G02150,AT3G08710,AT5G50110,AT3G11020,AT1G07020,AT1G66260,AT3G20670,AT2G40420,AT3G15710,AT1G01790,AT1G69030,AT5G43030,AT2G33700,AT5G25540,AT1G03260,AT1G06290,AT3G09390,AT5G20910,AT5G57000,AT5G28380,AT1G35190,AT2G29900,AT4G09720,AT3G48010,AT4G32620,AT1G17730,AT5G53280,AT3G28500,AT1G09140,AT5G43260,AT1G54560,AT2G15695,AT1G52280,AT3G47160,AT3G21220,AT5G62250,AT5G03030,AT3G20510,AT3G48070,AT4G29500,AT2G42680,AT2G21190,AT5G04820,AT2G23970,AT4G11820,AT2G22560,AT1G06750,AT4G21480,AT3G13920,AT5G53540,AT3G53680,AT1G80950,AT5G24360,AT3G11420,AT3G19010,AT1G02410,AT5G62310,AT5G15930,AT1G26480,AT3G02070,AT3G19610,AT1G27290,AT2G26890,AT1G16290,AT2G35170,AT4G16860,AT5G08565,AT4G35260,AT4G10250,AT3G16150 WANG_DURING-PTG_DN Dwon-regulated more than 1.6-fold during PTG (Table S2 PubmedID:18775970) AT5G39870,AT5G43530,AT2G19010,AT2G40400,AT4G37940,AT3G62480,AT1G15500,AT5G17640,AT5G48100,AT2G29400,AT4G00350,AT4G00090,AT3G06150,AT5G37060,AT5G57360,AT3G07870,AT3G53350,AT5G09510,AT2G28080,AT1G73630,AT3G24506,AT3G10460,AT2G45250,AT2G30170,AT2G48150,AT3G28810,AT1G10680,AT3G55030,AT1G44000,AT5G23590,AT4G30760,AT1G64630,AT5G27980,AT5G28470,AT2G18180,AT3G48360,AT3G06830,AT5G27870,AT4G33390,AT1G67290,AT3G01820,AT1G26180,AT1G15470,AT1G22110,AT1G62620,AT2G18680,AT1G72340,AT3G02040,AT5G66290,AT2G45620,AT4G34980,AT1G63060,AT5G03760,AT1G67623,AT1G50290,AT3G49590,AT3G03780,AT1G32220,AT2G38270,AT5G39310,AT5G15460,AT3G08730,AT3G05760,AT3G19630,AT3G28830,AT5G20930,AT4G30310,AT1G29130,AT3G49160,AT3G30720,AT1G22200,AT1G54070,AT5G57870,AT3G55600,AT5G42940,AT3G19970,AT3G28980,AT3G05290,AT1G22730,AT4G25030,AT3G24220,AT3G03250,AT2G39130,AT3G28780,AT5G10650,AT2G36630,AT3G20530,AT3G15410,AT2G24765,AT4G07960,AT1G12120,AT3G09760,AT5G47620,AT5G05100,AT1G80920,AT5G23720,AT3G02555,AT3G24720,AT5G57830,AT4G34340,AT5G01340,AT3G56680,AT4G38330,AT2G34440,AT3G59290,AT4G24630,AT2G25790,AT4G19830,AT1G67810,AT4G19110,AT5G49710,AT1G16760,AT1G03050,AT3G11690,AT4G27880,AT4G30690,AT5G03240,AT4G30850,AT1G53400,AT5G35410,AT1G79250,AT2G15640,AT3G19860,AT2G33870,AT1G10070,AT3G06480,AT4G35940,AT2G19450,AT5G61360,AT3G06350,AT4G37180,AT4G16110,AT1G13640,AT4G02470,AT3G12760,AT2G46910,AT5G47560,AT3G30380,AT5G47840,AT3G20200,AT1G36105,AT5G07420,AT4G37610,AT5G18140,AT2G37490,AT5G25340,AT4G38570,AT5G40610,AT5G38390,AT4G14930,AT4G33440,AT1G79860,AT2G20830,AT1G04300,AT2G46210,AT1G19680,AT5G39400,AT3G01620,AT3G20220,AT4G32130,AT2G28640,AT1G21070,AT5G38895,AT3G45040,AT5G23050,AT2G47120,AT4G26650,AT4G15980,AT2G16730,AT3G06483,AT5G16110,AT3G52360,AT1G17410,AT3G57480,AT1G77170,AT2G36900,AT5G54130,AT2G15240,AT5G19030,AT1G23030,AT1G37170,AT3G48560,AT3G24120,AT5G43930,AT5G47100,AT5G36250,AT3G01640,AT3G15630,AT5G10960,AT2G01480,AT1G64720,AT1G53170,AT3G08580,AT1G15490,AT5G09430,AT4G33780,AT1G11480,AT5G58690,AT1G45160,AT3G57550,AT4G29450,AT4G32120,AT3G12630,AT2G46860,AT5G48780,AT4G14385,AT5G25880,AT2G20320,AT1G78140,AT3G04470,AT1G61850,AT1G56180,AT2G36390,AT1G13950,AT1G79910,AT1G14670,AT3G51150,AT1G06970,AT4G28000,AT1G18990,AT2G05620,AT5G46800,AT2G18020,AT5G57630,AT3G50370,AT1G80280,AT5G25270,AT4G31340,AT3G51730,AT4G08240,AT1G74320,AT1G62960,AT1G06050,AT1G48300,AT5G02020,AT1G09970,AT1G08030,AT2G29020,AT1G52680,AT3G07850,AT5G53360,AT4G16040,AT4G32830,AT1G74780,AT5G41780,AT5G13100,AT4G27350,AT1G17455,AT1G22760,AT1G15880,AT3G11100,AT3G02480,AT5G18910,AT1G15230,AT3G20540,AT3G05820,AT2G25600,AT5G15470,AT3G60600,AT1G26130,AT3G24530,AT2G42780,AT5G03690,AT3G06780,AT2G17380,AT1G58290,AT1G72460,AT2G15535,AT4G22750,AT3G21570,AT4G34920,AT5G20120,AT1G15750,AT2G44160,AT2G30160,AT4G13560,AT4G26400,AT4G16745,AT5G15950,AT2G37850,AT5G27000,AT4G09460,AT1G64300,AT4G33940,AT4G26330,AT5G38760,AT2G32900,AT1G33290,AT4G20380,AT3G52800,AT5G52450,AT2G01100,AT5G66050,AT3G11740,AT3G13065,AT2G01670,AT5G18280,AT5G55640,AT2G37480,AT4G27110,AT5G58040,AT3G52540,AT1G24340,AT2G40620,AT4G03620,AT5G51710,AT3G21160,AT4G20070,AT4G29380,AT2G19330,AT2G45060,AT4G13980,AT2G47550,AT3G29060,AT3G17980,AT5G20460,AT2G31630,AT2G36990,AT1G20080,AT3G61230,AT3G19910,AT1G10740,AT5G27430,AT1G14290,AT1G43710,AT5G61710,AT2G47490,AT1G04290,AT3G15470,AT3G09320,AT5G05750,AT4G29735,AT5G49550,AT5G13550,AT5G28010,AT5G23340,AT5G16480,AT3G54370,AT3G58510,AT2G19880,AT3G57390,AT4G04800,AT3G12600,AT1G55000,AT1G70420,AT1G67580,AT5G01980,AT5G56160,AT5G51880,AT3G14200,AT1G18410,AT2G17990,AT2G03470,AT5G20060,AT1G28960,AT3G60030,AT2G39570,AT1G22800,AT5G54120,AT1G64740,AT5G44060,AT1G71410,AT5G49840,AT4G27600,AT5G58380,AT4G16950,AT3G22650,AT5G59610,AT3G28970,AT2G44090,AT3G59830,AT1G24610,AT5G01690,AT5G60790,AT3G42790,AT5G26734,AT3G18750,AT4G27500,AT4G33530,AT2G21390,AT1G11990,AT5G20520,AT3G15580,AT5G47470,AT3G55400,AT3G25910,AT5G58720,AT1G04760,AT1G27720,AT5G17480,AT1G04140,AT4G17790,AT2G32090,AT3G48510,AT1G04985,AT3G28790,AT2G23310,AT3G03080,AT3G04740,AT4G30420,AT1G55960,AT5G65530,AT5G62575,AT3G59090,AT1G12910,AT1G61770,AT4G03030,AT2G43170,AT3G10620,AT5G32440,AT5G01700,AT3G26130,AT3G10540,AT2G43020,AT2G38400,AT1G06890,AT2G28590,AT3G57140,AT5G60260,AT4G27980,AT2G17530,AT1G80210,AT1G79660,AT3G29610,AT5G09790,AT2G17420,AT4G02580,AT1G14685,AT5G07290,AT2G46920,AT2G21600,AT5G66010,AT3G51840,AT1G32520,AT3G51870,AT3G60200,AT1G45050,AT1G01090,AT1G23260,AT5G66300,AT3G11210,AT1G74960,AT2G45310,AT3G43300,AT1G79850,AT2G41880,AT1G73920,AT2G39770,AT1G16360,AT3G01630,AT1G59830,AT2G26080,AT1G80780,AT3G54850,AT1G12360,AT4G38260,AT1G79590,AT4G19860,AT3G52610,AT4G33140,AT5G64920,AT1G13970,AT5G11790,AT1G47270,AT3G18520,AT1G73170,AT1G20760,AT5G04540,AT2G26850,AT5G02840,AT1G01050,AT1G54630,AT3G56950,AT1G34780,AT3G54240,AT1G04470,AT1G28710,AT5G55100,AT5G01620,AT5G46910,AT5G50950,AT3G09770,AT3G25900,AT1G63000,AT5G53650,AT2G20440,AT4G35500,AT1G47380,AT1G19140,AT5G42360,AT1G56200,AT1G76370,AT3G50000,AT5G65520,AT4G35360,AT2G38500,AT1G03140,AT3G52620,AT5G18650,AT2G44870,AT4G39610,AT3G45100,AT5G11960,AT5G22480,AT2G21990,AT2G02140,AT4G20390,AT2G14800,AT1G17530,AT1G43670,AT2G38450,AT2G07360,AT1G03060,AT5G16220,AT5G61720,AT2G33270,AT1G08020,AT2G42080,AT4G34840,AT5G16880,AT1G29310,AT1G34630,AT5G61410,AT3G54110,AT4G00585,AT2G39890,AT1G63640,AT1G77840,AT4G18700,AT2G18470,AT3G11160,AT1G50020,AT4G28190,AT5G37230,AT5G44790,AT5G42390,AT3G01910,AT1G08510,AT1G68000,AT2G47340,AT4G26510,AT1G19110,AT2G01930,AT1G03920,AT2G43790,AT4G31090,AT5G36290,AT5G35990,AT4G17690,AT1G59700,AT3G02340,AT5G18510,AT3G07560,AT1G73670,AT3G55410,AT3G13200,AT1G05380,AT1G61620,AT1G58032,AT4G33010,AT4G17070,AT4G03290,AT3G53610,AT1G08730,AT1G64460,AT3G51770,AT1G05840,AT1G57680,AT5G56340,AT5G16780,AT2G33410,AT5G14240,AT3G62190,AT5G03370,AT4G25230,AT2G46260,AT2G45800,AT2G27180,AT3G61260,AT5G05080,AT3G52720,AT3G04080,AT3G05600,AT5G08410,AT5G64510,AT2G44610,AT2G20670,AT2G33460,AT5G24170,AT2G45200,AT1G07030,AT5G20350,AT3G02810,AT4G31080,AT4G15420,AT5G61960,AT2G32040,AT1G07470,AT3G07270,AT5G65960,AT5G05140,AT2G42210,AT5G46770,AT5G56450,AT5G47310,AT4G31290,AT1G16900,AT3G02800,AT4G38190,AT1G69360,AT1G72320,AT3G24315,AT2G46900,AT2G02180,AT3G25470,AT5G05110,AT1G17540,AT1G34150,AT1G54740,AT2G29790,AT5G35320,AT5G65685,AT1G17470,AT5G50850,AT5G17300,AT5G61530,AT2G47580,AT4G33630,AT3G12570,AT4G00810,AT1G24050,AT3G10980,AT1G43590,AT1G51740,AT1G61690,AT1G55530,AT3G07330,AT4G18640,AT2G46360,AT4G32760,AT1G61290,AT5G16120,AT4G15530,AT3G02830,AT4G33230,AT4G10010,AT2G36880,AT3G62310,AT2G19400,AT4G38320,AT5G58950,AT5G22030,AT4G26240,AT4G26180,AT5G06560,AT4G37640,AT2G20840,AT5G62750,AT2G47650,AT2G45330,AT4G12120,AT5G56640,AT2G41630,AT4G38510,AT3G25585,AT1G08770,AT5G01820,AT1G79110,AT3G50520,AT5G19760,AT2G48040,AT1G48140,AT3G50910,AT3G14960,AT2G35390,AT3G62290,AT1G73480,AT5G04460,AT5G57490,AT1G02000,AT4G26100,AT3G54230,AT3G53670,AT5G60550,AT2G17500,AT3G57530 WANG_DURING-PG&PTG_UP Transcriptionally up-regulated genes of the CaM/CML, CHX, and Hsp families during PG and PTG. (Table S7 PubmedID:18775970) AT1G76640,AT3G07490,AT3G10300,AT3G25600,AT1G74310,AT5G12030,AT3G46230,AT5G56030,AT1G54050,AT5G52640,AT2G29500,AT1G53540,AT5G59720,AT1G16030,AT1G59860,AT5G12020,AT2G20560,AT3G14200,AT3G12580,AT4G10250,AT5G56000,AT3G44110,AT3G08970 BEZHANI_BRM-101_UP Upregulated in brm-101 (Table S1 PubmedID:17293567) AT2G14610,AT4G12490,AT2G43620,AT4G12480,AT3G57260,AT5G64120,AT2G18660,AT2G43570,AT1G14870,AT4G21100,AT5G22500,AT3G28740,AT5G10760,AT4G12500,AT2G05380,AT3G18250,AT4G34135,AT5G03350,AT1G65500,AT2G14560,AT2G38530,AT1G66280,AT5G63600,AT5G20230,AT4G20320,AT3G15720,AT1G76930,AT1G21250,AT1G47400,AT2G01530,AT5G09570,AT4G01870,AT3G57240,AT4G12550,AT4G14365,AT5G58700,AT4G13180,AT3G09270,AT4G21380,AT4G33550,AT1G02930,AT3G53480,AT5G64100,AT5G24530,AT1G77450,AT5G20960,AT1G56120,AT5G61820,AT5G60950,AT2G35060,AT1G23020,AT4G30170,AT1G75040,AT5G53450,AT2G44450,AT4G12470,AT1G09500,AT1G75270,AT3G14620,AT5G62630,AT3G50740,AT2G03670,AT3G14940,AT5G59320,AT2G17290,AT1G21520,AT1G17860,AT5G50200,AT3G15950,AT1G78000,AT3G16460,AT5G26280,AT4G37530,AT3G22540,AT1G62290,AT1G71880,AT2G02930,AT2G34660,AT3G13610,AT1G26770,AT1G67120,AT3G17790,AT5G66690,AT1G76380,AT1G52200,AT5G63790,AT2G12400,AT1G17170,AT1G76690,AT1G58025 BEZHANI_BRM-101_DN Downregulated in brm-101 (Table S2 PubmedID:17293567) AT1G22690,AT4G35770,AT4G30140,AT1G22530,AT2G44740,AT1G80920,AT4G38420,AT3G62950,AT4G12730,AT5G65730,AT3G22740,AT5G43870,AT1G76090,AT1G67860,AT4G01950,AT4G00750,AT2G43520,AT2G03550,AT2G37540,AT3G16670,AT2G20670,AT2G40100,AT4G16515,AT1G76190,AT5G56100,AT3G21950,AT4G17810,AT1G22740,AT5G01015,AT1G22360,AT1G29395,AT3G10570,AT5G40500,AT1G75750,AT2G16060,AT4G17245,AT3G13650,AT1G26210,AT1G04110,AT3G15450,AT1G64640,AT5G49360,AT5G01600,AT1G67865,AT2G06850,AT1G25230,AT1G68585,AT1G04800,AT3G27770,AT5G07110,AT4G37540,AT3G15820,AT3G16530,AT2G38480,AT3G12700,AT4G22490,AT5G58570,AT2G21080,AT3G50660,AT3G51860,AT2G23560,AT5G03120,AT3G45970,AT1G04250,AT1G29440,AT4G26700,AT4G15630,AT5G47540,AT2G47440,AT1G03870,AT2G43530,AT2G20875,AT1G29500,AT5G42250,AT5G07000,AT4G24510,AT3G58120,AT2G16630,AT4G15660,AT1G14700,AT4G25260,AT2G29290,AT4G27450,AT5G59330,AT2G19460,AT2G21650,AT4G32870,AT5G18600,AT5G16570,AT5G35480,AT3G48360,AT2G47880,AT5G57560 BEZHANI_SYD-2_UP Upregulated in syd-2 (Table S3 PubmedID:17293567) AT2G26020,AT4G21100,AT5G03350,AT2G05380,AT4G01390,AT4G27300,AT3G02480,AT1G24260,AT3G50970,AT5G41790,AT4G16260,AT3G16530,AT2G45560,AT2G46450,AT1G12520,AT2G41980,AT3G57010,AT5G46070,AT4G01870,AT1G52690,AT1G02820,AT5G20230,AT1G34355,AT3G49620,AT3G44050,AT4G01270,AT5G59310,AT1G57590,AT4G21380,AT1G33060,AT5G63600,AT3G03450,AT3G13960 BEZHANI_SYD-2_DN Downregulated in syd-2 (Table S4 PubmedID:17293567) AT3G16670,AT1G73620,AT5G65390,AT3G45970,AT1G15550,AT1G23130,AT5G56870,AT2G14560,AT4G30610,AT5G02760,AT1G14870,AT2G16630,AT1G75900,AT4G38420,AT1G23205,AT3G22740,AT1G22690,AT5G08260,AT2G28290,AT5G65730,AT4G35480,AT2G27920,AT2G44740,AT1G75750,AT2G04570,AT3G62820,AT2G37380,AT5G09220,AT2G18890,AT1G04800,AT1G11545,AT3G54820,AT5G25840,AT5G43450,AT3G42570,AT4G28780,AT2G46070,AT5G49360,AT1G03870,AT3G23410,AT3G23730,AT2G42570,AT3G02170,AT2G14580,AT5G64410,AT5G53370,AT5G24660,AT3G15820,AT1G54120,AT1G52910,AT1G26210,AT5G19260,AT2G23560,AT3G53720,AT1G80080,AT1G80050,AT2G20875,AT3G51600,AT5G07110,AT5G44130,AT2G40670,AT3G10420,AT2G21140,AT1G33811,AT5G22580,AT1G28330,AT3G19930,AT5G50915,AT4G30270,AT3G54690,AT4G22510,AT5G01015,AT1G76520,AT1G67750,AT3G47295,AT3G52840,AT4G12730,AT1G04110,AT2G33850,AT1G68500,AT1G48330,AT5G57340,AT5G03120,AT4G04610,AT3G50440,AT1G13950,AT2G48030,AT5G09530,AT3G23840,AT1G54820,AT5G03760,AT4G34750,AT1G12110,AT1G80920,AT5G42250,AT4G23400,AT1G16170,AT1G31690,AT5G49330,AT3G16570 GOMEZ-MENA_AGGR-ACTIVATION_UP Upregulated 1, 3 and 7 days after AGGR activation (Table S1 PubmedID:15634696) AT3G54340,AT1G69180,AT4G12580,AT4G24040,AT4G38610,AT1G54890,AT4G05490,AT1G80450,AT1G15550,AT1G60040,AT5G45240,AT2G20670,AT4G10510,AT4G00080,AT1G15210,AT3G43690,AT3G11000,AT5G54950,rpl16.chloroplast,AT3G48810,AT3G07310,AT3G19550,AT5G02940,AT5G24580,AT2G38820,AT3G63510,AT4G02740,AT5G53090,psbI,AT5G18670,AT4G32980,AT2G21310,AT4G15690,AT3G17010,AT4G21590,AT2G20150,AT5G06170,psbT,rps16,AT3G58280,AT1G47610,AT2G29440,AT5G52330,AT4G18960,AT3G51190,AT3G19230,AT1G13400,psaI,AT1G34500,AT1G18200,AT1G24260,ycf1.1,AT1G26870,AT1G02190,AT4G31570,AT3G58780,AT4G01180,AT5G64190,AT4G37400,AT1G73620,AT4G03380,AT1G08325,AT2G46720,AT1G05490,AT1G12040,AT4G29690,AT1G01030,AT5G13790,AT5G57720,AT3G46770,AT1G16705,AT4G24130,AT4G26280,AT1G68480,AT3G12955,AT5G20240,AT2G01520,AT1G05480,AT1G12080,AT5G47600,AT3G28345,AT1G54420,AT2G46870,AT3G04960,AT5G67060,AT1G07090,AT5G18000,AT3G22840,AT3G02040,AT2G36270,AT1G68780,AT4G24150,AT4G27980,AT2G26400,AT5G22430,AT2G42830,AT2G35310,AT5G50790,AT2G16210,AT3G62610,AT5G15380,AT3G53310,AT5G14000,AT5G09780,AT5G66300,AT3G23130,AT1G30840,AT5G51800,AT1G17190,AT2G27880,AT1G67590,AT3G51660,AT2G46950,AT3G04290,AT2G27240,AT5G02760,AT1G77870,AT2G12480,AT4G28560,AT4G14695,AT3G23410,AT1G02800,AT2G23170,AT5G22860,AT1G73010,AT1G48330,AT2G39510,AT3G60900,AT1G76500,AT3G48460,AT1G24575,AT5G24330,AT5G15800,AT1G51670,AT1G49320,AT4G15480,AT5G50800,AT3G62820,AT4G18390,AT3G02310,AT3G21560,AT3G05110,AT2G34920,AT5G57570,AT4G32950,AT2G32280,AT5G13400,AT5G45280,AT1G03870 GOMEZ-MENA_AGGR-ACTIVATION_DN Downregulated 1, 3 and 7 days after AGGR activation (Table S2 PubmedID:15634696) AT5G17000,AT4G19770,AT4G26840,AT5G59320,AT3G24830,AT2G38540,AT4G39200,AT4G21960,AT3G15990,AT1G26880,AT5G37600,AT5G55450,AT1G80130,AT2G03120,AT1G07820,AT2G09990,AT4G03810,AT1G75830,AT2G36640,AT3G57210,AT1G64780,AT3G16500,AT5G01600,AT1G32450,AT1G37140,AT3G16430,AT1G30950,AT3G57130,AT3G12500,AT5G28490,AT2G45210,AT4G29140,AT1G35910,AT2G46410,AT1G56430,AT5G34920,AT3G20340,AT2G22550,AT4G21690,AT1G33700,AT1G36940,AT2G18300,AT3G02390,AT1G61800,AT5G23000,AT1G67865,AT1G26770,AT3G13130,AT3G11930,AT1G31710,AT2G22190,AT4G25780,AT5G54510,AT2G37900,AT2G22990,rps7.1_chloroplast,AT2G28085,AT3G25640,AT3G48740,AT3G14660,AT4G14020,AT4G02280,AT1G06160,AT5G23820,AT5G55330,AT2G22540 JAIN_35S-OSTOP6A1-TRANSGENE_UP Significantly up-regulated (>2 fold and P-value <0.01) genes in 35S::OsTOP6A1 transgenic Arabidopsis plants. (Table S2 PubmedID:18071708) AT1G59900,AT1G78970,AT5G58770,AT2G23590,AT4G12310,AT5G05750,AT1G24793,AT2G11810,AT2G02400,AT2G43530,AT3G61000,AT1G17420,AT3G31415,AT1G17710,AT1G28670,AT3G46490,AT2G03980,AT5G53970,AT3G17790,AT4G12330,ndhA,AT5G54290,AT1G06640,AT4G16140,AT5G20150,AT5G13110,AT5G24150,AT2G30540,AT2G18800,AT3G16450,AT2G05540,AT5G20410,AT1G05200,AT5G15020,AT2G38240,AT4G35090,AT3G44740,ndhI,AT5G24420,AT4G15660,AT1G78960,AT1G19670,AT3G16520,AT2G22970,AT1G09350,AT5G47810,AT3G62750,AT3G55970,AT1G24340,AT1G59124,AT4G16860,AT5G45070,AT3G44630,AT1G65390,AT1G02820,AT1G58842,AT4G16990,AT4G07820,AT3G46530,AT4G16950,AT2G21045,AT5G40910,AT4G16890,AT1G69550,AT5G56030,AT2G19310,AT2G14080,AT5G13170,AT2G15080,AT1G45616,AT4G15910,AT1G34340,AT4G19530,AT4G26850,AT2G21970,AT5G01220,AT1G65870,AT3G45930,AT5G10400,AT3G44890,AT5G59090,AT3G21280,AT4G13340,AT3G24890,AT4G05050,AT2G46450,AT1G31820,AT3G46980,AT4G20410,AT5G52050,AT3G23560,AT3G43740,AT1G75960,AT1G64950,AT3G14210,AT3G26300,AT3G57710,AT4G23220,AT1G60710,AT4G34500,AT1G79670,AT1G33790,AT2G16250,AT4G23200,AT1G16260,AT5G42590,AT1G66540,AT4G37320,AT5G63450,AT1G29440,AT3G53380,AT1G22590,AT5G07690,AT4G00050,AT5G54040,AT1G35560,AT4G31805,AT4G40060,AT2G03710,AT3G02380,AT3G26744,AT5G50915,AT3G53370,AT1G61250,AT5G24780,AT4G36700,AT4G27150,AT2G23330,AT2G13970,AT4G16870,AT1G31580,AT2G25510,AT1G23960,AT5G24660,AT5G45500,AT1G27540,AT2G14460,AT1G58270,AT3G59930,AT3G44430,AT1G24996,AT4G20480,AT2G11260,AT5G20790,AT2G21860,AT2G43535,AT3G62460,AT1G12400,AT5G26270,AT5G26260,AT5G44580,AT5G55790,AT1G20390,AT1G73010,AT1G65370,AT3G15310,AT5G45490,AT2G41650,AT3G50480,AT1G65400,AT1G03020,AT5G50100,AT2G14880,AT3G56290,AT5G45420,AT1G62010,AT5G27990,AT1G64700,AT2G46880,AT1G35612,AT4G21140,AT1G67865,AT4G08110,AT2G36145,AT1G31910,AT4G21860,AT2G45130,AT5G45480,AT2G01870,AT3G02040,AT2G27290,AT3G59300,AT4G13800,AT3G18980,AT4G14010,AT3G16670,AT2G04050,AT4G09680,AT3G53390,AT1G76960,AT5G41650,AT3G61930,AT3G07950,AT4G27280,AT4G31530,AT4G17240,AT2G14660,AT5G47610,AT4G11835,AT5G42760,orf111d,AT4G32960,orf262,AT4G27030,AT2G21640,AT3G10420,AT2G33220,AT5G65870,AT5G47455,AT4G17280,AT1G19200,AT1G12730,AT3G28180,AT1G16560,AT3G59400,AT1G62860,AT1G32520,AT3G58060,AT4G16510,AT4G01730,AT5G10620,AT4G20950,AT5G36710,AT2G21830,AT1G53880,AT3G48700,AT5G45550,AT5G58980,AT5G03200,AT4G01080,AT5G44050,AT4G21850,AT3G44860,AT3G28290,AT4G13630,AT1G64720,AT1G66100,AT3G12110,AT1G55960,AT3G50570 JAIN_35S-OSTOP6A1-TRANSGENE_DN Significantly down-regulated (>2 fold and P-value <0.01) genes in 35S::OsTOP6A1 transgenic Arabidopsis plants. (Table S3 PubmedID:18071708) AT3G21950,AT1G69230,AT4G12440,AT1G43800,AT1G79500,AT5G38710,AT1G11080,AT5G38000,AT2G45220,AT5G19890,AT1G55120,AT3G61810,AT5G49630,AT2G29350,AT5G28030,AT4G14630,AT1G09420,AT3G16700,AT3G57260,AT1G21100,AT3G29410,AT4G23600,AT4G15480,AT5G47980,AT4G12280,AT4G32940,AT4G20070,AT1G17020,AT2G26560,AT5G45210,AT5G40920,AT1G59620,AT5G02150,AT1G16030,AT2G21130,AT2G41380,AT4G35770,AT4G19470,AT1G20620,AT5G51470,AT5G60100,AT4G27300,AT4G08470,AT3G26740,AT2G33830,AT2G39310,AT1G58160,AT5G38550,AT5G38020,AT5G04380,AT5G35940,AT3G26210,AT3G20130,AT1G49860,AT4G11360,AT4G15850,AT4G29190,AT1G24260,rpoC2,AT1G65180,AT3G48920,AT1G48310,AT1G34180,AT5G01180,AT3G51860,AT4G23700,AT5G45380,AT4G12470,AT2G37870,AT5G55450,AT4G21326,AT2G39850,AT5G59320,AT5G59310,AT1G02300,AT5G64050,AT5G39100,AT3G26460,AT1G44800,AT1G30990,AT3G05950,AT1G18980,AT4G14060,AT2G39510,AT3G29775,AT4G19100,AT3G48770,AT5G55570,AT4G01430,AT1G21010,AT5G50760,AT2G28780,AT4G31730,AT3G18610,AT1G19530,AT3G62920,AT1G19960,AT3G45160,AT1G62770,AT1G30940,AT5G02130,AT2G37750,AT3G26840,AT1G48180,AT4G29770,AT4G30720,AT1G76530,AT5G47550,AT4G22960,AT2G01520,AT1G34570,AT2G38720,AT2G44370,AT4G27050,AT3G14560,AT1G54120,AT2G27540,AT2G15890,AT1G12080,AT2G40960,AT1G50950,AT1G07740,AT3G56890,AT5G39520,AT3G10020,AT1G26530,AT4G19430,AT2G23480,AT1G31200,AT5G20700,AT2G35820,AT3G48640,AT5G17100,AT5G15360,AT4G14270,AT5G50790,AT2G16700,AT3G23910,AT5G37990,AT4G31570 JAIN_35S-OSTOP6A1-TRANSGENE_ABA_DIFF Differentially expressed in 35S::OsTOP6A1 transgenic Arabidopsis plants and in the presence of ABA in wild-type seedlings (Table S4 PubmedID:18071708) AT1G58270,AT2G46450,AT3G26300,AT1G65390,AT2G23590,AT5G50100,AT5G53970,AT5G45480,AT1G31820,AT3G17790,AT4G14010,AT5G47610,AT5G13170,AT4G17280,AT1G19200,AT3G10420,AT4G21850,AT2G22970,AT4G15910,AT5G50760,AT2G16700,AT4G27300,AT3G45160,AT3G48920,AT5G19890,AT2G37750,AT4G32940,AT2G37870,AT5G49630,AT3G23910,AT3G14560,AT3G51860,AT1G54120,AT1G17020,AT5G47980,AT4G29190,AT5G59320,AT4G23700,AT5G39520,AT5G04380,AT5G59310 JAIN_35S-OSTOP6A1-TRANSGENE_SALT_DIFF Differentially expressed in 35S::OsTOP6A1 transgenic Arabidopsis plants and in the presence of salt stress in wild-type plants (Table S4 PubmedID:18071708) AT5G24660,AT4G16860,AT1G58270,AT3G45930,AT1G78970,AT1G02820,AT2G43535,AT5G26270,AT3G44860,AT1G75960,AT1G64950,AT1G73010,AT5G58770,AT1G03020,AT2G23590,AT5G50100,AT2G14880,AT3G56290,AT3G28290,AT5G24780,AT1G35612,AT1G67865,AT1G28670,AT3G46490,AT2G03980,AT5G53970,AT2G19310,AT1G31820,AT3G17790,AT4G13800,AT4G14010,AT3G16670,AT5G03200,AT1G76960,AT4G23220,AT1G66100,AT4G27280,AT4G19530,AT2G14660,AT5G13170,AT2G30540,AT3G16450,AT5G44050,AT1G65870,AT1G29440,AT5G24420,AT2G15080,AT3G12110,AT3G10420,AT1G55960,AT1G16260,AT3G28180,AT2G22970,AT1G09350,AT4G15910,AT3G02380,AT5G36710,AT5G55570,AT4G01430,AT2G16700,AT4G20070,rpoC2,AT3G26840,AT1G76530,AT5G47550,AT2G37870,AT5G49630,AT3G23910,AT3G14560,AT3G51860,AT4G23600,AT1G17020,AT4G29190,AT2G15890,AT1G12080,AT5G59320,AT2G29350,AT2G33830,AT2G41380,AT5G39520,AT3G10020,AT4G19430,AT5G20700,AT5G04380,AT5G59310,AT4G12280,AT4G35770 JAIN_35S-OSTOP6A1-TRANSGENE_DROUGHT_DIFF Differentially expressed in 35S::OsTOP6A1 transgenic Arabidopsis plants and in the presence of drought stress in wild-type plants (Table S4 PubmedID:18071708) AT1G31580,AT2G25510,AT1G59900,AT1G59124,AT1G23960,AT5G24660,AT5G45500,AT4G16860,AT2G14460,AT3G43740,AT1G58270,AT3G45930,AT2G46450,AT3G26300,AT3G59930,AT3G44430,AT3G44630,AT4G16870,AT1G24996,AT4G20480,AT1G65390,AT1G78970,AT2G11260,AT5G20790,AT1G02820,AT2G21860,AT1G61250,AT1G58842,AT2G43535,AT3G62460,AT1G12400,AT3G44860,AT4G07820,AT3G46530,AT1G75960,AT5G26260,AT5G44580,AT5G55790,AT1G64950,AT4G16950,AT5G58770,AT3G15310,AT5G45490,AT5G07690,AT5G05750,AT2G41650,AT1G03020,AT3G44890,AT2G23590,AT5G59090,AT2G11810,AT2G43530,AT3G21280,AT1G65400,AT5G40910,AT3G14210,AT5G50100,AT2G14880,AT3G56290,AT3G28290,AT1G62010,AT5G27990,AT3G26744,AT3G61000,AT1G17420,AT3G31415,AT1G64700,AT5G24780,AT1G35612,AT4G21140,AT3G48700,AT4G16890,AT1G67865,AT4G13630,AT1G28670,AT2G36145,AT3G46490,AT1G31910,AT1G69550,AT2G03980,AT5G45550,AT4G21860,AT5G53970,AT2G45130,AT5G45480,AT1G31820,AT2G01870,AT3G02040,AT2G27290,AT5G01220,AT5G42590,ndhA,AT5G54290,AT4G31805,AT3G59300,AT4G13800,AT5G56030,AT5G58980,AT3G18980,AT4G14010,AT3G16670,AT4G40060,AT1G66540,AT3G57710,AT4G20410,AT1G24340,AT2G03710,AT5G03200,AT1G64720,AT2G04050,AT4G09680,AT3G53390,AT2G23330,AT1G66100,AT3G07950,AT4G27280,AT1G06640,AT4G31530,AT4G19530,AT2G14660,AT4G16140,AT5G20150,AT4G11835,AT5G13110,AT5G47610,AT5G24150,AT5G42760,AT5G13170,AT4G01080,AT4G37320,AT4G26850,orf111d,AT4G32960,AT5G44050,AT4G13340,AT2G38240,AT4G27030,AT1G65870,AT1G29440,AT3G23560,AT5G20410,AT1G60710,AT1G05200,AT4G35090,AT4G34500,AT1G79670,AT1G19200,AT3G44740,AT5G15020,AT5G24420,AT2G21640,AT2G15080,AT2G21970,AT1G33790,AT3G12110,AT3G10420,AT1G55960,AT4G15660,AT1G78960,AT3G53370,AT2G33220,AT5G65870,AT5G47455,AT1G45616,AT1G19670,AT1G12730,AT3G16520,AT4G21850,AT3G28180,AT1G16560,AT3G50570,AT1G09350,AT3G59400,AT1G62860,AT5G47810,AT3G02380,AT4G16510,AT4G01730,AT5G10620,AT5G36710,AT3G55970,AT3G53380,AT2G21830,AT4G19100,AT5G39100,AT4G12440,AT5G55570,AT4G01430,AT1G21010,AT1G43800,AT3G26460,AT5G50760,AT3G26740,AT2G16700,AT4G31730,AT1G79500,AT5G38710,AT5G01180,AT1G19530,AT5G40920,AT5G02150,AT3G62920,AT1G19960,AT5G51470,AT1G62770,AT5G60100,AT2G45220,AT1G30940,AT1G30990,rpoC2,AT4G14270,AT1G59620,AT1G55120,AT3G26840,AT4G32940,AT3G61810,AT4G30720,AT1G76530,AT5G47550,AT2G37870,AT5G49630,AT1G48310,AT5G64050,AT2G01520,AT4G11360,AT5G45380,AT3G23910,AT4G27050,AT4G21326,AT1G16030,AT4G23600,AT4G15480,AT1G17020,AT1G20620,AT5G47980,AT5G37990,AT4G29190,AT2G15890,AT1G12080,AT5G59320,AT2G29350,AT2G33830,AT2G21130,AT2G41380,AT1G50950,AT3G20130,AT3G56890,AT1G24260,AT3G10020,AT5G55450,AT2G26560,AT3G57260,AT1G18980,AT2G23480,AT1G31200,AT5G38020,AT4G14060,AT5G20700,AT2G35820,AT5G04380,AT5G59310,AT1G49860,AT4G31570,AT1G21100,AT4G35770,AT5G15360 MUELLER_PPA1-TREATMENT_UP Upregulated by PPA1 Treatment (Table 1 PubmedID:18334669) AT3G28740,AT3G14660,AT3G14650,AT1G13080,AT3G14690,AT3G14640,AT3G14620,AT3G03470,AT4G34131,AT4G34135,AT1G05560,AT4G01070,AT2G30140,AT1G17170,AT2G47730,AT1G17180,AT1G74590,AT1G78340,AT2G29420,AT2G29460,AT1G78380,AT1G76680,AT1G76690,AT1G15520,AT1G02530,AT1G02520,AT3G47780,AT2G47000,AT3G47730,AT2G34660,AT1G30400,AT3G55090,AT3G21250,AT2G29500,AT4G36990,AT3G12580,AT3G23990,AT1G56300,AT4G20860,AT1G32350,AT4G01870,AT4G37990,AT5G16980,AT2G39200,AT1G75280,AT3G05360,AT3G13610,AT5G15870,AT5G16970,AT5G16990,AT5G17000,AT5G37980 MUELLER_PPA1-TREATMENT_DN Downregulated by PPA1 Treatment (Table 2 PubmedID:18334669) AT3G11700,AT1G44110,AT1G08560,AT5G23860,AT4G03620,AT3G12110,AT4G34160,AT1G18370,AT1G76540,AT3G11520,AT5G09870,AT2G23130,AT1G70710,AT4G12730,AT5G57560,AT4G28250,AT3G02120,AT3G62110,AT4G38400,AT3G15720,AT3G06770,AT3G03050,AT1G02730,AT5G64740,AT1G15580,AT1G23080,AT4G32280,AT1G73590,AT5G65670,AT5G43700,AT1G04240,AT2G33310,AT3G62100,AT4G28640 MUELLER_PPA1&OPDA-TREATMENT_UP Upregulated by PPA1 and OPDA Treatment Dependent on the Presence of TGA2, TGA5, and TGA6 (Table 4 PubmedID:18334669) AT5G13080,AT3G26830,AT5G22300,AT2G43500,AT3G25190,AT2G34660,AT5G52020,AT2G34500,AT5G51500,AT2G12190,AT1G64950,AT1G64940,AT1G64930,AT5G02780,AT3G10500,AT2G37770,AT1G30400,AT3G59140,AT3G14620,AT1G17860,AT5G59510,AT5G03490,AT3G63380,AT3G09270,AT3G01420,AT1G72680,AT1G72900,AT3G48850,AT3G01970,AT4G22070,AT1G13990,AT5G19440,AT5G14570,AT1G64660,AT3G21700,AT5G22860,AT1G63340,AT1G62580,AT2G21620,AT1G23440,AT1G17020,AT5G17860,AT2G43510,AT1G33590,AT4G30490,AT4G37980,AT5G65300,AT3G14680,AT1G06800,AT2G47800,AT3G05880,AT2G24180 MOON_WT/PIF1-MUTANT-SEEDLINGS_DIFF Regulatory genes in WT vs. pif1 mutant seedlings (Table S1 PubmedID:18591656) AT5G54190,AT1G03630,AT5G18660,AT5G40850,AT5G08280,AT2G26550,AT4G27440,AT3G59400,AT1G44318,AT3G48730,AT2G40490,AT3G14930,AT5G45930,AT5G63570,AT3G56940,AT3G51820,AT2G26670,AT3G14110,AT1G03475,AT1G09940,AT1G69740,AT5G13630,AT5G26030,AT3G09150,AT1G08520,AT5G14220,AT4G18490,AT4G03205,AT4G25080,AT4G01690,AT1G44446,AT1G58290,AT2G26540,AT5G63290,AT2G30390,AT1G58300,AT2G31250,AT1G69720,AT4G05320 MOON_TETRAPYRROLE_DIFF Promoters of genes for the tetrapyrrole pathway in Arabidopsis (Table S2 PubmedID:18591656) AT5G54190,AT1G03630,AT5G18660,AT5G40850,AT5G08280,AT2G26550,AT4G27440,AT3G59400,AT1G44318,AT3G48730,AT2G40490,AT3G14930,AT5G45930,AT5G63570,AT3G56940,AT3G51820,AT2G26670,AT3G14110,AT1G03475,AT1G09940,AT1G69740,AT5G13630,AT5G26030,AT1G69720,AT3G09150,AT1G08520,AT5G14220,AT4G18490,AT4G03205,AT4G25080,AT4G01690,AT1G44446,AT1G58290,AT2G26540,AT5G63290,AT2G30390,AT1G58300,AT2G31250 WILLIGE_GA3-TREATMENT_GA1-ALLELE_DN Repressed by 100 ?M GA3 treatment (1 hour) in a ga1 allele (SALK_109115, Columbia ecotype) (Table 1 PubmedID:17416730) AT1G15550,AT5G51810,AT1G50420,AT2G45900,AT3G63010,AT5G07200,AT2G04240,AT4G25420,AT2G12290,AT2G26710,AT2G31980,AT5G25190,AT2G31160,AT4G39070,AT3G04070,AT5G47610,AT1G17830,AT3G05120,AT1G29270,AT4G36110,AT3G30180,AT4G16447,AT2G36080,AT1G58340,AT2G39980,AT1G52250,AT5G40540,AT2G28400,AT5G28300,AT2G45210,AT5G25210,AT1G55910,AT1G60590,AT4G04630,AT2G01940,AT3G21420,AT4G23060,AT3G60290,AT1G30110,AT3G56400,AT4G29190,AT5G07010,AT5G65040,AT2G45080,AT1G20190,AT1G28360,AT4G39510,AT1G31320,AT3G15570,AT5G67480,AT5G19340,AT2G39705,AT5G03670,AT1G33790,AT4G32800,AT4G23200,AT3G02910,AT2G40435,AT5G17760,AT4G24210,AT4G27300,AT1G46264,AT4G36410,AT1G52770,AT5G46050,AT1G28190,AT4G26150,AT2G29440,AT5G60400,AT1G78120,AT3G11280,AT5G19730,AT1G63840,AT4G01720,AT5G56860,AT5G20110,AT2G39710,AT1G26770,AT3G22760,AT1G33960,AT1G21060,AT5G07240,AT5G57220,AT1G22400,AT2G02710,AT4G33050,AT4G00480,AT5G50130,AT5G20820,AT1G63090,AT5G06790,AT3G27880,AT4G27410,AT5G53420,AT4G36220,AT5G48800,AT1G56010,AT5G53210,AT1G58440,AT5G42750,AT2G26170,AT4G31330,AT5G67520,AT2G05940,AT1G21820,AT1G23090,AT1G56650,AT3G22104,AT3G50240,AT3G63210,AT3G19200,AT1G20650,AT3G46670,AT5G47220,AT3G26960,AT5G39220,AT2G41180,AT5G62470,AT5G06530,AT5G61520 WILLIGE_GA3-TREATMENT_GA1-ALLELE_UP Induced by 100 ?M GA3 treatment (1 hour) in a ga1 allele (SALK_109115, Columbia ecotype) (Table 1 PubmedID:17416730) AT1G14920,AT5G20790,AT3G58120,AT1G78170,AT2G45680,AT2G18300,AT5G15580,AT5G65300,AT1G57560,AT1G76620,AT3G28910,AT2G41940,AT5G01040,AT5G40390,AT1G10480,AT5G54510,AT5G08130,AT1G69530,AT3G15540,AT2G34140,AT3G07010,AT4G14550,AT3G14560,AT1G19220,AT4G32280,AT1G10120,AT1G07090,AT5G56870 ZHANG_ROOT_DIFF Preferentially expressed in root (Table S 7 PubmedID:18539592) AT1G02810,AT1G02900,AT1G05250,AT1G05260,AT1G09090,AT1G13300,AT1G13420,AT1G14080,AT1G14120,AT1G14220,AT1G14240,AT1G14960,AT1G15045,AT1G15210,AT1G15380,AT1G18980,AT1G19530,AT1G21100,AT1G22440,AT1G24320,AT1G26250,AT1G29280,AT1G30370,AT1G30720,AT1G30750,AT1G30870,AT1G31050,AT1G31950,AT1G32450,AT1G47600,AT1G49570,AT1G49860,AT1G50560,AT1G52050,AT1G52060,AT1G52070,AT1G52820,AT1G61590,AT1G64590,AT1G66280,AT1G66800,AT1G67110,AT1G67330,AT1G70850,AT1G71400,AT1G71692,AT1G73260,AT1G73330,AT1G73780,AT1G74460,AT1G74500,AT1G74760,AT1G77330,AT1G78000,AT1G80240,AT2G01520,AT2G01530,AT2G01880,AT2G04800,AT2G05510,AT2G16005,AT2G16980,AT2G18140,AT2G18210,AT2G18980,AT2G19970,AT2G21020,AT2G21045,AT2G23030,AT2G25160,AT2G25810,AT2G25980,AT2G27370,AT2G28670,AT2G28780,AT2G29330,AT2G29750,AT2G30210,AT2G31085,AT2G32300,AT2G33790,AT2G34020,AT2G35270,AT2G36100,AT2G38390,AT2G39040,AT2G39310,AT2G39430,AT2G39530,AT2G41660,AT2G41800,AT2G42060,AT2G42250,AT2G43610,AT2G44380,AT2G44790,AT2G45430,AT2G47000,AT3G01190,AT3G01220,AT3G01260,AT3G02850,AT3G02885,AT3G04570,AT3G05920,AT3G05950,AT3G09260,AT3G09270,AT3G09940,AT3G11550,AT3G12500,AT3G13610,AT3G13760,AT3G15240,AT3G15357,AT3G15950,AT3G16450,AT3G16460,AT3G18200,AT3G19390,AT3G19430,AT3G20370,AT3G21770,AT3G22570,AT3G23190,AT3G23250,AT3G23430,AT3G23800,AT3G24240,AT3G24290,AT3G25190,AT3G25830,AT3G25930,AT3G26460,AT3G26470,AT3G27150,AT3G29250,AT3G29410,AT3G31415,AT3G45070,AT3G45700,AT3G45710,AT3G45960,AT3G46280,AT3G47210,AT3G49860,AT3G50640,AT3G51910,AT3G52450,AT3G53480,AT3G53980,AT3G54770,AT3G59370,AT3G59930,AT3G60550,AT3G61990,AT3G62040,AT3G62680,AT3G62760,AT4G02270,AT4G07820,AT4G08770,AT4G08780,AT4G11190,AT4G11210,AT4G11650,AT4G11880,AT4G12510,AT4G12550,AT4G13235,AT4G13280,AT4G13580,AT4G13660,AT4G14630,AT4G15340,AT4G15390,AT4G16260,AT4G17800,AT4G18510,AT4G18610,AT4G19030,AT4G19690,AT4G20230,AT4G21600,AT4G21830,AT4G21850,AT4G22212,AT4G22610,AT4G25250,AT4G26010,AT4G26320,AT4G29270,AT4G29690,AT4G30170,AT4G30290,AT4G31320,AT4G31910,AT4G33420,AT4G33720,AT4G34600,AT4G36430,AT4G37070,AT4G37160,AT4G37410,AT4G39675,AT5G01040,AT5G04120,AT5G05960,AT5G06800,AT5G10130,AT5G10580,AT5G14650,AT5G17330,AT5G17350,AT5G17820,AT5G19110,AT5G19520,AT5G19890,AT5G20550,AT5G23020,AT5G23830,AT5G23840,AT5G26260,AT5G26280,AT5G28610,AT5G37690,AT5G37990,AT5G38020,AT5G38030,AT5G38700,AT5G39110,AT5G40510,AT5G42500,AT5G42590,AT5G42600,AT5G43180,AT5G43370,AT5G43520,AT5G44380,AT5G44920,AT5G45070,AT5G46900,AT5G47450,AT5G47990,AT5G48000,AT5G48010,AT5G48070,AT5G48110,AT5G48430,AT5G50590,AT5G51440,AT5G52790,AT5G53250,AT5G54370,AT5G56080,AT5G58860,AT5G59090,AT5G60520,AT5G60660,AT5G62330,AT5G62340,AT5G63600,AT5G63660,AT5G64100,AT5G64905,AT5G65970,AT5G66280,AT5G66390,AT5G66985,AT5G67400 ZHANG_STEM_DIFF Preferentially expressed in stem (Table S 7 PubmedID:18539592) AT1G07120,AT1G08340,AT1G09610,AT1G19940,AT1G22480,AT1G27380,AT1G27440,AT1G32770,AT1G33800,AT1G47485,AT1G61810,AT1G62360,AT1G63910,AT1G67030,AT1G69080,AT1G73640,AT1G74660,AT1G75590,AT1G79620,AT1G80170,AT2G03200,AT2G29130,AT2G31900,AT2G31930,AT2G37090,AT2G37280,AT2G37750,AT2G38080,AT2G41610,AT2G44745,AT3G15050,AT3G16920,AT3G18660,AT3G21710,AT3G23090,AT3G25930,AT3G45870,AT3G50220,AT3G53980,AT3G54040,AT3G59010,AT3G59845,AT3G62020,AT4G09990,AT4G17220,AT4G18780,AT4G23496,AT4G26320,AT4G27435,AT4G28380,AT4G28500,AT4G34970,AT5G01190,AT5G01360,AT5G03170,AT5G05390,AT5G14090,AT5G15630,AT5G16570,AT5G17420,AT5G38000,AT5G40020,AT5G42180,AT5G44030,AT5G48560,AT5G54690,AT5G59305,AT5G60020,AT5G60490,AT5G67210 ZHANG_FLOWER/FLORAL_DIFF Preferentially expressed in flowers/floral organs (Table S 7 PubmedID:18539592) AT1G01280,AT1G01600,AT1G02050,AT1G02070,AT1G02470,AT1G02813,AT1G03390,AT1G04670,AT1G05680,AT1G06170,AT1G06260,AT1G06990,AT1G07340,AT1G08065,AT1G09155,AT1G09240,AT1G09500,AT1G10770,AT1G12180,AT1G13070,AT1G13140,AT1G13150,AT1G15360,AT1G15520,AT1G17020,AT1G18280,AT1G20120,AT1G20150,AT1G20180,AT1G22015,AT1G22380,AT1G22760,AT1G23010,AT1G23060,AT1G23240,AT1G23570,AT1G23670,AT1G25330,AT1G26310,AT1G26710,AT1G28375,AT1G28430,AT1G29230,AT1G30020,AT1G30350,AT1G30795,AT1G32350,AT1G32780,AT1G33430,AT1G35290,AT1G35310,AT1G44222,AT1G44970,AT1G45190,AT1G48940,AT1G50310,AT1G51440,AT1G52680,AT1G53540,AT1G53830,AT1G54020,AT1G54570,AT1G54790,AT1G56360,AT1G57750,AT1G58340,AT1G58430,AT1G59640,AT1G59860,AT1G61070,AT1G61110,AT1G61680,AT1G62763,AT1G62940,AT1G63710,AT1G66120,AT1G66390,AT1G66540,AT1G66850,AT1G67990,AT1G68620,AT1G68875,AT1G69180,AT1G69490,AT1G69500,AT1G69930,AT1G70720,AT1G71000,AT1G71140,AT1G71160,AT1G71680,AT1G72110,AT1G72260,AT1G72290,AT1G73260,AT1G74310,AT1G74540,AT1G74550,AT1G74590,AT1G75030,AT1G75050,AT1G75300,AT1G75790,AT1G75880,AT1G75910,AT1G75920,AT1G75930,AT1G75940,AT1G76240,AT1G76470,AT1G78950,AT1G78960,AT1G80660,AT2G03740,AT2G03850,AT2G04570,AT2G06090,AT2G07560,AT2G12480,AT2G13810,AT2G16210,AT2G16760,AT2G16910,AT2G17470,AT2G17845,AT2G17880,AT2G17950,AT2G18420,AT2G18660,AT2G19070,AT2G19770,AT2G20870,AT2G21220,AT2G21655,AT2G23620,AT2G23800,AT2G24210,AT2G26150,AT2G28085,AT2G28355,AT2G28680,AT2G29350,AT2G29470,AT2G29500,AT2G29790,AT2G33690,AT2G34500,AT2G36190,AT2G37770,AT2G38110,AT2G39060,AT2G39350,AT2G41380,AT2G41800,AT2G42940,AT2G42990,AT2G43510,AT2G43570,AT2G43610,AT2G44240,AT2G45560,AT2G45580,AT2G46240,AT2G46680,AT2G47190,AT2G47270,AT3G01250,AT3G01530,AT3G01970,AT3G01980,AT3G03480,AT3G03670,AT3G04070,AT3G04540,AT3G05960,AT3G06100,AT3G07450,AT3G07850,AT3G08560,AT3G10570,AT3G11340,AT3G11480,AT3G11980,AT3G12000,AT3G13220,AT3G13950,AT3G14380,AT3G15400,AT3G18250,AT3G18360,AT3G19390,AT3G20520,AT3G21500,AT3G21930,AT3G21970,AT3G22000,AT3G23770,AT3G24510,AT3G25050,AT3G25810,AT3G26140,AT3G27810,AT3G27812,AT3G28740,AT3G28780,AT3G28790,AT3G28830,AT3G28840,AT3G28980,AT3G42960,AT3G44250,AT3G46660,AT3G46770,AT3G48970,AT3G50770,AT3G51590,AT3G52130,AT3G52160,AT3G52810,AT3G53300,AT3G55310,AT3G55870,AT3G56610,AT3G57620,AT3G59530,AT3G62230,AT3G63380,AT4G00700,AT4G00950,AT4G02140,AT4G04500,AT4G08670,AT4G10250,AT4G10310,AT4G11290,AT4G11650,AT4G11760,AT4G12530,AT4G12890,AT4G12920,AT4G12960,AT4G13210,AT4G13230,AT4G13560,AT4G13790,AT4G13900,AT4G14080,AT4G14690,AT4G14815,AT4G15620,AT4G16270,AT4G16590,AT4G16740,AT4G18550,AT4G18980,AT4G18990,AT4G19430,AT4G20420,AT4G21630,AT4G22080,AT4G23700,AT4G24000,AT4G24140,AT4G25040,AT4G25380,AT4G25950,AT4G28395,AT4G28530,AT4G29250,AT4G29340,AT4G29980,AT4G34400,AT4G34850,AT4G34970,AT4G35060,AT4G35420,AT4G37150,AT4G37900,AT4G37990,AT4G39480,AT5G01740,AT5G04180,AT5G04200,AT5G05280,AT5G05340,AT5G07230,AT5G07410,AT5G07510,AT5G07520,AT5G07530,AT5G07540,AT5G07550,AT5G07560,AT5G09550,AT5G09730,AT5G10770,AT5G13080,AT5G13380,AT5G15720,AT5G16080,AT5G16920,AT5G16960,AT5G17340,AT5G17480,AT5G19880,AT5G20240,AT5G20330,AT5G20710,AT5G21150,AT5G22300,AT5G22430,AT5G22860,AT5G22980,AT5G23270,AT5G23960,AT5G23970,AT5G24820,AT5G24860,AT5G25110,AT5G28470,AT5G33370,AT5G34885,AT5G37170,AT5G38760,AT5G39520,AT5G40260,AT5G40350,AT5G40690,AT5G41890,AT5G42170,AT5G43340,AT5G44300,AT5G44620,AT5G44630,AT5G45890,AT5G45960,AT5G46940,AT5G47600,AT5G48210,AT5G48400,AT5G48410,AT5G49070,AT5G50030,AT5G50710,AT5G52160,AT5G52390,AT5G53190,AT5G53810,AT5G53820,AT5G55720,AT5G58400,AT5G58782,AT5G59120,AT5G59515,AT5G59810,AT5G60500,AT5G61605,AT5G62080,AT5G62320,AT5G62730,AT5G63450 ZHANG_STAMENS/POLLEN_DIFF Preferentially expressed in stamens/pollen (Table S 7 PubmedID:18539592) AT1G01310,AT1G01460,AT1G01780,AT1G01980,AT1G02000,AT1G02470,AT1G02790,AT1G03050,AT1G03070,AT1G03240,AT1G03457,AT1G03620,AT1G03920,AT1G04090,AT1G04470,AT1G04500,AT1G04540,AT1G04600,AT1G04670,AT1G04700,AT1G04880,AT1G05020,AT1G05580,AT1G06260,AT1G06540,AT1G06750,AT1G06970,AT1G06990,AT1G07330,AT1G07340,AT1G07410,AT1G07540,AT1G07590,AT1G07850,AT1G08065,AT1G08150,AT1G08730,AT1G08860,AT1G09155,AT1G09170,AT1G09600,AT1G10620,AT1G10680,AT1G10770,AT1G11040,AT1G11250,AT1G11770,AT1G11990,AT1G12070,AT1G12450,AT1G13130,AT1G13890,AT1G13970,AT1G14420,AT1G15045,AT1G15350,AT1G15360,AT1G15380,AT1G15460,AT1G15990,AT1G16290,AT1G16360,AT1G16380,AT1G16760,AT1G17540,AT1G18280,AT1G18410,AT1G18520,AT1G18530,AT1G18990,AT1G19090,AT1G19500,AT1G19640,AT1G19780,AT1G19890,AT1G19940,AT1G20080,AT1G20130,AT1G22110,AT1G22130,AT1G22150,AT1G22380,AT1G22460,AT1G22760,AT1G23210,AT1G23240,AT1G23350,AT1G23520,AT1G23540,AT1G23570,AT1G23590,AT1G23600,AT1G23650,AT1G23670,AT1G23690,AT1G23730,AT1G23800,AT1G24110,AT1G24330,AT1G24400,AT1G24520,AT1G24620,AT1G25240,AT1G26320,AT1G26480,AT1G26610,AT1G26840,AT1G28130,AT1G28270,AT1G28375,AT1G28430,AT1G28550,AT1G29140,AT1G29230,AT1G29630,AT1G30350,AT1G30710,AT1G31750,AT1G32250,AT1G32450,AT1G33770,AT1G35310,AT1G35490,AT1G36105,AT1G42560,AT1G43630,AT1G44120,AT1G44160,AT1G47270,AT1G47280,AT1G47980,AT1G48940,AT1G49270,AT1G49290,AT1G49490,AT1G50310,AT1G50610,AT1G50990,AT1G51250,AT1G51260,AT1G51410,AT1G51490,AT1G51915,AT1G52240,AT1G52570,AT1G52580,AT1G52680,AT1G53010,AT1G54070,AT1G54240,AT1G54280,AT1G54560,AT1G55410,AT1G55560,AT1G55570,AT1G56360,AT1G57550,AT1G58120,AT1G58210,AT1G59640,AT1G60040,AT1G60240,AT1G60740,AT1G61080,AT1G61110,AT1G61290,AT1G61566,AT1G61680,AT1G61700,AT1G61860,AT1G62450,AT1G63060,AT1G63190,AT1G63930,AT1G64110,AT1G64300,AT1G64320,AT1G64740,AT1G64800,AT1G65240,AT1G66120,AT1G66210,AT1G66360,AT1G66850,AT1G67290,AT1G67540,AT1G67623,AT1G67640,AT1G67810,AT1G68090,AT1G68110,AT1G68290,AT1G68610,AT1G68630,AT1G68750,AT1G69050,AT1G69280,AT1G70170,AT1G70540,AT1G70720,AT1G70790,AT1G71380,AT1G71680,AT1G71770,AT1G72460,AT1G72960,AT1G73070,AT1G73630,AT1G73860,AT1G74000,AT1G74010,AT1G74220,AT1G74490,AT1G75160,AT1G75300,AT1G75870,AT1G75910,AT1G75930,AT1G75940,AT1G76370,AT1G76640,AT1G77730,AT1G77980,AT1G78160,AT1G78460,AT1G78940,AT1G78980,AT1G79250,AT1G79400,AT1G79450,AT1G79860,AT1G79910,AT1G80660,AT2G02140,AT2G02720,AT2G03060,AT2G03410,AT2G03630,AT2G03840,AT2G04220,AT2G04675,AT2G05850,AT2G06040,AT2G07040,AT2G07560,AT2G10970,AT2G11480,AT2G13350,AT2G13570,AT2G13620,AT2G13670,AT2G13675,AT2G14490,AT2G15340,AT2G15535,AT2G15650,AT2G15880,AT2G16040,AT2G16120,AT2G16730,AT2G16750,AT2G17090,AT2G17500,AT2G17845,AT2G17880,AT2G17890,AT2G17950,AT2G18080,AT2G18180,AT2G18340,AT2G18470,AT2G19000,AT2G19010,AT2G19040,AT2G19050,AT2G19330,AT2G19400,AT2G19500,AT2G19770,AT2G19980,AT2G20320,AT2G20430,AT2G20440,AT2G20470,AT2G20700,AT2G21480,AT2G21540,AT2G21990,AT2G22180,AT2G22290,AT2G22340,AT2G22950,AT2G23660,AT2G23800,AT2G23900,AT2G24210,AT2G24320,AT2G24370,AT2G24450,AT2G24460,AT2G25460,AT2G25600,AT2G25630,AT2G25890,AT2G26410,AT2G26450,AT2G26490,AT2G26850,AT2G27180,AT2G28180,AT2G28355,AT2G28440,AT2G28640,AT2G28680,AT2G29040,AT2G29050,AT2G29410,AT2G29470,AT2G29620,AT2G29790,AT2G30240,AT2G30290,AT2G30630,AT2G30690,AT2G31500,AT2G31830,AT2G31980,AT2G32460,AT2G32670,AT2G32890,AT2G33100,AT2G33270,AT2G33320,AT2G33350,AT2G33420,AT2G33460,AT2G33670,AT2G33690,AT2G33870,AT2G34440,AT2G35210,AT2G36020,AT2G36190,AT2G36660,AT2G37010,AT2G37070,AT2G37670,AT2G37980,AT2G38500,AT2G38520,AT2G38910,AT2G38920,AT2G38940,AT2G39060,AT2G39510,AT2G39700,AT2G39820,AT2G40180,AT2G40620,AT2G40680,AT2G40790,AT2G40990,AT2G41210,AT2G41440,AT2G41860,AT2G41970,AT2G43040,AT2G43230,AT2G44560,AT2G45310,AT2G45580,AT2G45610,AT2G45800,AT2G46140,AT2G46210,AT2G46300,AT2G46360,AT2G46860,AT2G47040,AT2G47050,AT2G47270,AT2G47340,AT2G47670,AT2G48150,AT3G01015,AT3G01020,AT3G01240,AT3G01250,AT3G01270,AT3G01530,AT3G01620,AT3G01630,AT3G01700,AT3G01980,AT3G02440,AT3G02480,AT3G02555,AT3G02810,AT3G02850,AT3G02970,AT3G03080,AT3G03430,AT3G03800,AT3G04070,AT3G04360,AT3G04620,AT3G04690,AT3G04700,AT3G05140,AT3G05150,AT3G05610,AT3G05720,AT3G05820,AT3G05930,AT3G05960,AT3G06260,AT3G06490,AT3G06560,AT3G06830,AT3G07070,AT3G07490,AT3G07820,AT3G07830,AT3G07840,AT3G07850,AT3G07960,AT3G08560,AT3G08810,AT3G08970,AT3G09530,AT3G09550,AT3G09760,AT3G09930,AT3G10460,AT3G10470,AT3G10890,AT3G11160,AT3G11180,AT3G11430,AT3G11690,AT3G11740,AT3G11850,AT3G12160,AT3G12510,AT3G12660,AT3G12690,AT3G13065,AT3G13390,AT3G13400,AT3G13660,AT3G13900,AT3G14380,AT3G15280,AT3G15400,AT3G16040,AT3G16350,AT3G16380,AT3G17060,AT3G17220,AT3G17630,AT3G17720,AT3G17980,AT3G18220,AT3G18360,AT3G18810,AT3G19020,AT3G19090,AT3G19310,AT3G19390,AT3G19610,AT3G19690,AT3G19970,AT3G20190,AT3G20200,AT3G20220,AT3G20300,AT3G20530,AT3G20580,AT3G20660,AT3G20865,AT3G21180,AT3G21570,AT3G21700,AT3G21930,AT3G21960,AT3G21970,AT3G22000,AT3G22360,AT3G22650,AT3G22740,AT3G22750,AT3G22910,AT3G23170,AT3G23270,AT3G23350,AT3G24280,AT3G24620,AT3G24720,AT3G25050,AT3G25165,AT3G25170,AT3G25900,AT3G26110,AT3G26860,AT3G26880,AT3G27290,AT3G27410,AT3G27440,AT3G27812,AT3G28007,AT3G28150,AT3G28210,AT3G28490,AT3G28630,AT3G28750,AT3G28770,AT3G28780,AT3G28790,AT3G28810,AT3G28830,AT3G28840,AT3G28980,AT3G29060,AT3G29070,AT3G42640,AT3G42850,AT3G42880,AT3G43120,AT3G43860,AT3G44070,AT3G44230,AT3G44250,AT3G44930,AT3G45280,AT3G45320,AT3G45810,AT3G46520,AT3G46750,AT3G47130,AT3G47440,AT3G47660,AT3G48010,AT3G48450,AT3G50310,AT3G51070,AT3G51300,AT3G51490,AT3G52000,AT3G52080,AT3G52460,AT3G52600,AT3G52620,AT3G52810,AT3G53080,AT3G53300,AT3G54040,AT3G54240,AT3G54800,AT3G55100,AT3G55180,AT3G55190,AT3G55310,AT3G55870,AT3G56600,AT3G56960,AT3G57140,AT3G57390,AT3G57510,AT3G57690,AT3G57950,AT3G58160,AT3G59290,AT3G59530,AT3G59680,AT3G59830,AT3G60100,AT3G60330,AT3G60570,AT3G60760,AT3G60780,AT3G61160,AT3G61230,AT3G61760,AT3G62040,AT3G62170,AT3G62180,AT3G62230,AT3G62640,AT3G62710,AT4G00350,AT4G01470,AT4G01575,AT4G02140,AT4G02250,AT4G02650,AT4G03290,AT4G03620,AT4G04080,AT4G04930,AT4G04980,AT4G05330,AT4G07960,AT4G08400,AT4G08590,AT4G08670,AT4G09950,AT4G10010,AT4G10260,AT4G10440,AT4G11030,AT4G11760,AT4G12410,AT4G12430,AT4G12860,AT4G12930,AT4G13190,AT4G13230,AT4G13240,AT4G13450,AT4G13560,AT4G13790,AT4G14370,AT4G14780,AT4G14810,AT4G15120,AT4G15190,AT4G15200,AT4G15250,AT4G15650,AT4G15980,AT4G16040,AT4G16745,AT4G17690,AT4G18395,AT4G18425,AT4G18640,AT4G18790,AT4G18920,AT4G18960,AT4G18980,AT4G18990,AT4G19690,AT4G20050,AT4G20160,AT4G20460,AT4G20500,AT4G20530,AT4G21326,AT4G21420,AT4G21490,AT4G22070,AT4G22640,AT4G22960,AT4G23960,AT4G24170,AT4G24580,AT4G24630,AT4G24640,AT4G25010,AT4G25040,AT4G25150,AT4G25590,AT4G25780,AT4G25950,AT4G26260,AT4G26330,AT4G26390,AT4G26440,AT4G26470,AT4G26770,AT4G26830,AT4G26930,AT4G27110,AT4G27350,AT4G27580,AT4G27790,AT4G27980,AT4G28000,AT4G28280,AT4G28670,AT4G28700,AT4G29340,AT4G29450,AT4G29550,AT4G30140,AT4G30290,AT4G30770,AT4G30860,AT4G31020,AT4G31220,AT4G31230,AT4G31330,AT4G32630,AT4G33230,AT4G33390,AT4G33850,AT4G33970,AT4G34135,AT4G34440,AT4G34510,AT4G34940,AT4G35010,AT4G35060,AT4G35180,AT4G35280,AT4G35380,AT4G35650,AT4G35670,AT4G35700,AT4G36110,AT4G36350,AT4G36490,AT4G36600,AT4G36880,AT4G37840,AT4G37940,AT4G38190,AT4G38230,AT4G39110,AT4G39130,AT4G39180,AT4G39480,AT4G39610,AT4G39670,AT4G40020,AT5G01610,AT5G01690,AT5G01700,AT5G02390,AT5G02430,AT5G02570,AT5G03250,AT5G03600,AT5G03620,AT5G03690,AT5G04180,AT5G04390,AT5G05070,AT5G05280,AT5G07010,AT5G07410,AT5G07420,AT5G07430,AT5G07510,AT5G07520,AT5G07530,AT5G07540,AT5G07550,AT5G07560,AT5G09430,AT5G09550,AT5G09570,AT5G10090,AT5G10260,AT5G10500,AT5G10660,AT5G10770,AT5G12000,AT5G12180,AT5G13150,AT5G13350,AT5G13580,AT5G13990,AT5G14380,AT5G14670,AT5G14870,AT5G14890,AT5G15100,AT5G15110,AT5G15140,AT5G15600,AT5G16100,AT5G16480,AT5G16500,AT5G16540,AT5G17340,AT5G17400,AT5G17480,AT5G18510,AT5G18910,AT5G19360,AT5G19580,AT5G19600,AT5G19610,AT5G20240,AT5G20330,AT5G20340,AT5G20390,AT5G20410,AT5G20460,AT5G20690,AT5G20710,AT5G20810,AT5G20820,AT5G21050,AT5G23270,AT5G24240,AT5G24860,AT5G24880,AT5G24940,AT5G25340,AT5G25400,AT5G25430,AT5G25530,AT5G25550,AT5G25880,AT5G26060,AT5G26150,AT5G26310,AT5G26696,AT5G27000,AT5G27870,AT5G27980,AT5G28470,AT5G28680,AT5G35090,AT5G35380,AT5G35390,AT5G36260,AT5G37060,AT5G37170,AT5G37230,AT5G37810,AT5G38130,AT5G38760,AT5G39310,AT5G39400,AT5G39420,AT5G39650,AT5G39870,AT5G39880,AT5G40040,AT5G40155,AT5G40260,AT5G40350,AT5G40645,AT5G41310,AT5G41730,AT5G41780,AT5G42170,AT5G42260,AT5G42340,AT5G42490,AT5G42880,AT5G43030,AT5G43530,AT5G44300,AT5G44610,AT5G45810,AT5G45820,AT5G45840,AT5G45880,AT5G45890,AT5G46200,AT5G46770,AT5G46795,AT5G46940,AT5G47000,AT5G47470,AT5G47540,AT5G48140,AT5G48270,AT5G48780,AT5G49130,AT5G49680,AT5G50030,AT5G50800,AT5G50830,AT5G51030,AT5G51950,AT5G52340,AT5G52360,AT5G53190,AT5G53520,AT5G53820,AT5G54010,AT5G54095,AT5G54120,AT5G54780,AT5G55490,AT5G55930,AT5G55980,AT5G56160,AT5G56640,AT5G56750,AT5G56780,AT5G57200,AT5G57240,AT5G57320,AT5G57690,AT5G57810,AT5G57830,AT5G58050,AT5G58170,AT5G59120,AT5G59370,AT5G60010,AT5G60070,AT5G60260,AT5G60740,AT5G61350,AT5G61360,AT5G61430,AT5G61605,AT5G61620,AT5G61700,AT5G61710,AT5G61720,AT5G61730,AT5G61980,AT5G62310,AT5G62750,AT5G62850,AT5G64510,AT5G64690,AT5G64790,AT5G65090,AT5G65160,AT5G65530,AT5G66020,AT5G66740,AT5G67020,AT5G67080 ZHANG_SEED_DIFF Preferentially expressed in seed (Table S 7 PubmedID:18539592) AT1G01250,AT1G02700,AT1G02850,AT1G03790,AT1G03880,AT1G03890,AT1G03990,AT1G04380,AT1G04560,AT1G04580,AT1G04645,AT1G04660,AT1G05280,AT1G05450,AT1G05510,AT1G07500,AT1G08170,AT1G09370,AT1G09380,AT1G09550,AT1G10540,AT1G11170,AT1G12010,AT1G12130,AT1G12180,AT1G14930,AT1G14940,AT1G14950,AT1G15150,AT1G15330,AT1G16030,AT1G16730,AT1G16770,AT1G16850,AT1G17010,AT1G17260,AT1G17310,AT1G17810,AT1G18100,AT1G19230,AT1G19320,AT1G19530,AT1G19540,AT1G19900,AT1G20500,AT1G21970,AT1G22480,AT1G22600,AT1G22990,AT1G23050,AT1G23070,AT1G23200,AT1G24430,AT1G24520,AT1G24540,AT1G24735,AT1G25270,AT1G25410,AT1G26400,AT1G26680,AT1G27040,AT1G27380,AT1G27470,AT1G27990,AT1G28030,AT1G28360,AT1G28590,AT1G29680,AT1G30700,AT1G30860,AT1G31670,AT1G31750,AT1G32560,AT1G32770,AT1G34580,AT1G43160,AT1G43640,AT1G43800,AT1G47540,AT1G47980,AT1G48130,AT1G48470,AT1G48660,AT1G48910,AT1G48930,AT1G50650,AT1G52560,AT1G52690,AT1G53270,AT1G54860,AT1G54870,AT1G56100,AT1G56320,AT1G56600,AT1G60680,AT1G60970,AT1G61090,AT1G61720,AT1G62060,AT1G62070,AT1G62210,AT1G62290,AT1G62340,AT1G62510,AT1G62710,AT1G63910,AT1G64110,AT1G65090,AT1G65480,AT1G65670,AT1G65880,AT1G66770,AT1G67100,AT1G68380,AT1G68450,AT1G68510,AT1G68850,AT1G70840,AT1G70985,AT1G71120,AT1G71250,AT1G71690,AT1G71691,AT1G71890,AT1G72100,AT1G72110,AT1G73190,AT1G73290,AT1G74460,AT1G75490,AT1G75830,AT1G76230,AT1G77240,AT1G77450,AT1G77950,AT1G78390,AT1G78500,AT1G79840,AT1G80090,AT2G01580,AT2G01770,AT2G02120,AT2G02515,AT2G03520,AT2G04040,AT2G05580,AT2G05910,AT2G14690,AT2G15010,AT2G15325,AT2G15340,AT2G17850,AT2G18340,AT2G18360,AT2G18370,AT2G19320,AT2G19900,AT2G20770,AT2G21100,AT2G21490,AT2G21820,AT2G22510,AT2G23110,AT2G23220,AT2G23240,AT2G23410,AT2G23510,AT2G23540,AT2G23550,AT2G23580,AT2G23640,AT2G24430,AT2G25340,AT2G25540,AT2G25890,AT2G25940,AT2G27370,AT2G27380,AT2G27940,AT2G28420,AT2G28490,AT2G28650,AT2G29300,AT2G29380,AT2G30210,AT2G30810,AT2G31945,AT2G32120,AT2G32190,AT2G32210,AT2G32370,AT2G33070,AT2G33520,AT2G33590,AT2G34315,AT2G34700,AT2G34740,AT2G34870,AT2G35300,AT2G36270,AT2G36640,AT2G36710,AT2G37360,AT2G38340,AT2G38465,AT2G38900,AT2G38905,AT2G40170,AT2G40370,AT2G41070,AT2G41260,AT2G41280,AT2G41390,AT2G42000,AT2G42560,AT2G42860,AT2G43050,AT2G43390,AT2G43670,AT2G44250,AT2G44260,AT2G44470,AT2G44540,AT2G45900,AT2G46750,AT2G46790,AT2G46960,AT2G47120,AT2G47180,AT2G47200,AT2G47670,AT2G47750,AT2G47770,AT2G47780,AT2G48130,AT2G48140,AT3G01420,AT3G01570,AT3G02480,AT3G02670,AT3G02940,AT3G02990,AT3G03240,AT3G03620,AT3G04150,AT3G04170,AT3G04190,AT3G04200,AT3G04370,AT3G05260,AT3G05460,AT3G06390,AT3G08860,AT3G08900,AT3G10590,AT3G11050,AT3G11180,AT3G12203,AT3G12720,AT3G12955,AT3G12960,AT3G14630,AT3G14760,AT3G15050,AT3G15280,AT3G15670,AT3G16920,AT3G17130,AT3G17150,AT3G17520,AT3G17600,AT3G18400,AT3G18570,AT3G18660,AT3G19500,AT3G19920,AT3G20210,AT3G20520,AT3G21370,AT3G21380,AT3G21520,AT3G21720,AT3G21830,AT3G21840,AT3G21850,AT3G22490,AT3G22500,AT3G22620,AT3G22640,AT3G24220,AT3G24250,AT3G24510,AT3G24650,AT3G25160,AT3G25260,AT3G25420,AT3G26330,AT3G26770,AT3G26790,AT3G26860,AT3G27660,AT3G27780,AT3G30460,AT3G31955,AT3G44460,AT3G44540,AT3G44830,AT3G46230,AT3G48510,AT3G48580,AT3G49270,AT3G50220,AT3G50970,AT3G50980,AT3G50990,AT3G51810,AT3G52550,AT3G52970,AT3G53040,AT3G53230,AT3G53510,AT3G54330,AT3G54940,AT3G56350,AT3G57020,AT3G57250,AT3G58450,AT3G58550,AT3G58740,AT3G59030,AT3G59580,AT3G60730,AT3G61040,AT3G61880,AT3G62090,AT3G62730,AT3G63040,AT4G00220,AT4G01410,AT4G01970,AT4G02280,AT4G02690,AT4G03050,AT4G09090,AT4G09600,AT4G09610,AT4G09820,AT4G10020,AT4G10850,AT4G11180,AT4G12890,AT4G12960,AT4G15390,AT4G15750,AT4G16160,AT4G17215,AT4G17280,AT4G18425,AT4G18650,AT4G18920,AT4G20390,AT4G21020,AT4G21630,AT4G21680,AT4G22100,AT4G24150,AT4G25040,AT4G25140,AT4G25580,AT4G25980,AT4G26050,AT4G26200,AT4G26590,AT4G26740,AT4G27140,AT4G27150,AT4G27160,AT4G27170,AT4G27250,AT4G27460,AT4G27530,AT4G28520,AT4G29285,AT4G31830,AT4G32105,AT4G32490,AT4G33330,AT4G33600,AT4G34510,AT4G34520,AT4G35150,AT4G35725,AT4G36600,AT4G36610,AT4G36620,AT4G36700,AT4G37050,AT4G37360,AT4G38080,AT4G39130,AT5G01300,AT5G01670,AT5G01870,AT5G03640,AT5G03800,AT5G03810,AT5G03860,AT5G04000,AT5G04010,AT5G04370,AT5G04380,AT5G04500,AT5G05220,AT5G05320,AT5G06760,AT5G07190,AT5G07200,AT5G07260,AT5G07330,AT5G07500,AT5G07680,AT5G08360,AT5G08460,AT5G09370,AT5G09480,AT5G09520,AT5G09530,AT5G09640,AT5G10120,AT5G10220,AT5G10580,AT5G12030,AT5G12460,AT5G13330,AT5G13580,AT5G13670,AT5G13790,AT5G13900,AT5G14130,AT5G15180,AT5G15630,AT5G16460,AT5G16770,AT5G18450,AT5G19410,AT5G20860,AT5G20960,AT5G22470,AT5G22810,AT5G23190,AT5G23230,AT5G24130,AT5G24316,AT5G24910,AT5G24950,AT5G24970,AT5G25180,AT5G27200,AT5G35550,AT5G35660,AT5G37690,AT5G38160,AT5G38170,AT5G38180,AT5G38195,AT5G39130,AT5G39190,AT5G39280,AT5G39520,AT5G39720,AT5G39890,AT5G40155,AT5G40420,AT5G41040,AT5G42290,AT5G43770,AT5G44120,AT5G44310,AT5G44360,AT5G44380,AT5G44550,AT5G44700,AT5G45310,AT5G45690,AT5G45770,AT5G45830,AT5G46040,AT5G47150,AT5G47350,AT5G47530,AT5G47670,AT5G47810,AT5G48100,AT5G49180,AT5G49190,AT5G49350,AT5G49700,AT5G50170,AT5G50260,AT5G50360,AT5G50600,AT5G50750,AT5G50770,AT5G51210,AT5G51480,AT5G51490,AT5G51760,AT5G52300,AT5G52500,AT5G53100,AT5G53660,AT5G54000,AT5G54070,AT5G54220,AT5G54740,AT5G55240,AT5G55470,AT5G55490,AT5G55750,AT5G56300,AT5G57260,AT5G57390,AT5G57520,AT5G57550,AT5G57790,AT5G58500,AT5G58660,AT5G58782,AT5G58860,AT5G59170,AT5G59845,AT5G60220,AT5G60630,AT5G60760,AT5G62150,AT5G62480,AT5G62490,AT5G62800,AT5G63560,AT5G64190,AT5G64530,AT5G65550,AT5G66110,AT5G66400,AT5G66430,AT5G66780 ZHANG_PKL-MUTANT/WT_DIFF Expressed 3-fold higher in pkl mutants versus wild-type plants or in pkl plants treated with uniconazole versus wild-type plants treated with uniconazole as determined by microarray analysis. (Table S 8 PubmedID:18539592) AT1G03880,AT1G05510,AT1G11700,AT1G14930,AT1G15790,AT1G17810,AT1G18100,AT1G18590,AT1G19530,AT1G19610,AT1G21520,AT1G28650,AT1G34510,AT1G43800,AT1G47980,AT1G52100,AT1G54860,AT1G54870,AT1G59740,AT1G71250,AT1G73190,AT1G78750,AT2G02120,AT2G02930,AT2G18050,AT2G22590,AT2G23240,AT2G25450,AT2G25940,AT2G28490,AT2G29340,AT2G37750,AT2G43510,AT3G05260,AT3G11660,AT3G14210,AT3G20100,AT3G21370,AT3G22570,AT3G22640,AT3G23060,AT3G27660,AT3G30720,AT3G44020,AT3G44720,AT3G49780,AT3G50770,AT3G50970,AT3G58450,AT3G61930,AT3G62150,AT4G00320,AT4G00390,AT4G04630,AT4G09600,AT4G09610,AT4G16480,AT4G22080,AT4G24130,AT4G25140,AT4G25790,AT4G26740,AT4G27140,AT4G27150,AT4G27160,AT4G27170,AT4G27570,AT4G28520,AT4G30170,AT4G31830,AT5G05340,AT5G10120,AT5G14780,AT5G19800,AT5G22580,AT5G35940,AT5G38170,AT5G43580,AT5G43770,AT5G44120,AT5G45690,AT5G46230,AT5G47130,AT5G50600,AT5G54740,AT5G55240,AT5G59320,AT5G62210,AT5G62800,AT5G63750,ATCG01080 ZHANG_PKL_UNICONAZOLE_UP Increase of effect of pkl and of uniconazole on transcript level of gene . (Table S 5 PubmedID:18539592) AT1G01470,AT1G01520,AT1G02305,AT1G03030,AT1G03495,AT1G03880,AT1G04350,AT1G05510,AT1G06180,AT1G07430,AT1G07500,AT1G08180,AT1G08630,AT1G09840,AT1G11700,AT1G13280,AT1G14890,AT1G15170,AT1G15740,AT1G16240,AT1G16340,AT1G16730,AT1G16850,AT1G17810,AT1G18100,AT1G19130,AT1G19530,AT1G19570,AT1G21520,AT1G23010,AT1G25275,AT1G27990,AT1G28100,AT1G28110,AT1G28330,AT1G30510,AT1G31710,AT1G33780,AT1G33970,AT1G35290,AT1G47980,AT1G48130,AT1G48420,AT1G48510,AT1G52100,AT1G52250,AT1G52720,AT1G52760,AT1G53070,AT1G53280,AT1G53560,AT1G54860,AT1G54870,AT1G56190,AT1G56220,AT1G56280,AT1G60590,AT1G60890,AT1G62290,AT1G62500,AT1G62810,AT1G64660,AT1G64900,AT1G65060,AT1G65090,AT1G68240,AT1G68660,AT1G69410,AT1G69600,AT1G71080,AT1G71890,AT1G71950,AT1G72940,AT1G73190,AT1G73380,AT1G74410,AT1G77000,AT1G77710,AT1G78050,AT1G78780,AT1G79790,AT1G80160,AT1G80360,AT2G02850,AT2G02930,AT2G02990,AT2G03330,AT2G06925,AT2G17820,AT2G17840,AT2G18050,AT2G19900,AT2G21490,AT2G21820,AT2G24420,AT2G25450,AT2G25890,AT2G26440,AT2G28490,AT2G28790,AT2G29340,AT2G29740,AT2G31350,AT2G33590,AT2G37040,AT2G37750,AT2G37760,AT2G38170,AT2G38465,AT2G38905,AT2G39570,AT2G39980,AT2G43200,AT2G43530,AT2G43540,AT2G45290,AT2G45510,AT2G46680,AT2G47710,AT2G47770,AT3G01520,AT3G01570,AT3G01590,AT3G01920,AT3G02910,AT3G03330,AT3G04320,AT3G05020,AT3G05120,AT3G05260,AT3G07410,AT3G09390,AT3G10200,AT3G11660,AT3G12490,AT3G12520,AT3G13175,AT3G14060,AT3G14210,AT3G14360,AT3G15290,AT3G15580,AT3G15790,AT3G16910,AT3G17020,AT3G18080,AT3G18280,AT3G18570,AT3G18960,AT3G22490,AT3G22550,AT3G22640,AT3G23490,AT3G23570,AT3G23640,AT3G23910,AT3G24180,AT3G26290,AT3G26740,AT3G26770,AT3G27660,AT3G29180,AT3G46660,AT3G48000,AT3G48610,AT3G50770,AT3G50970,AT3G51240,AT3G51430,AT3G51810,AT3G51860,AT3G52180,AT3G53210,AT3G54260,AT3G56350,AT3G58200,AT3G58450,AT3G58690,AT3G59940,AT3G60290,AT3G60690,AT3G61530,AT4G01900,AT4G02360,AT4G02920,AT4G04630,AT4G09500,AT4G09600,AT4G09610,AT4G10910,AT4G14090,AT4G14760,AT4G15390,AT4G15490,AT4G16520,AT4G22870,AT4G22920,AT4G24210,AT4G24220,AT4G25140,AT4G26270,AT4G26740,AT4G26940,AT4G27130,AT4G27140,AT4G27900,AT4G28390,AT4G28520,AT4G29080,AT4G29190,AT4G30020,AT4G30650,AT4G31830,AT4G32290,AT4G32770,AT4G33150,AT4G33780,AT4G36010,AT4G36600,AT4G36700,AT4G37300,AT4G37550,AT4G38090,AT4G38810,AT4G39130,AT4G39540,AT5G01300,AT5G01670,AT5G02790,AT5G03880,AT5G04750,AT5G07010,AT5G07040,AT5G07190,AT5G07330,AT5G07470,AT5G08380,AT5G10510,AT5G10580,AT5G13420,AT5G13750,AT5G14120,AT5G14500,AT5G14780,AT5G14940,AT5G15720,AT5G15780,AT5G16450,AT5G17220,AT5G17800,AT5G18170,AT5G18200,AT5G19860,AT5G20540,AT5G20960,AT5G21150,AT5G22000,AT5G22470,AT5G22580,AT5G28020,AT5G36160,AT5G36220,AT5G38980,AT5G39220,AT5G40420,AT5G40760,AT5G40850,AT5G42800,AT5G42850,AT5G43430,AT5G43580,AT5G43600,AT5G43770,AT5G43780,AT5G44120,AT5G45690,AT5G46230,AT5G47130,AT5G49120,AT5G49555,AT5G50600,AT5G50915,AT5G51020,AT5G51810,AT5G51970,AT5G52420,AT5G54060,AT5G54740,AT5G54770,AT5G55240,AT5G57785,AT5G57790,AT5G58375,AT5G59800,AT5G60460,AT5G61510,AT5G61590,AT5G62530,AT5G62800,AT5G64250,AT5G64260,AT5G64780,AT5G64840,AT5G65040,AT5G65960,AT5G66110,AT5G66120,AT5G66400,AT5G66590,AT5G66730,AT5G67480,AT5G67490 ZHANG_PKL_UNICONAZOLE_DN Decrease of effect of pkl and of uniconazole on transcript level of gene. (Table S 5 PubmedID:18539592) AT1G01380,AT1G01620,AT1G02205,AT1G02640,AT1G04170,AT1G04340,AT1G04680,AT1G06450,AT1G07370,AT1G07790,AT1G08590,AT1G09160,AT1G09210,AT1G11600,AT1G12080,AT1G12090,AT1G12270,AT1G13730,AT1G14440,AT1G18090,AT1G22530,AT1G23090,AT1G26560,AT1G29080,AT1G35620,AT1G41830,AT1G43780,AT1G44900,AT1G50010,AT1G50370,AT1G53170,AT1G56110,AT1G61260,AT1G62740,AT1G63660,AT1G66260,AT1G67060,AT1G69526,AT1G69530,AT1G70830,AT1G71695,AT1G72070,AT1G72150,AT1G72970,AT1G76160,AT1G79920,AT1G80280,AT2G03980,AT2G04570,AT2G14060,AT2G14890,AT2G15090,AT2G16440,AT2G16630,AT2G17280,AT2G19480,AT2G19880,AT2G26580,AT2G37690,AT2G38120,AT2G39020,AT2G40220,AT2G40290,AT2G41540,AT2G42710,AT2G42990,AT2G45970,AT3G02920,AT3G04290,AT3G04770,AT3G05100,AT3G05600,AT3G05890,AT3G07010,AT3G07800,AT3G10720,AT3G15480,AT3G15680,AT3G17790,AT3G18165,AT3G19360,AT3G19760,AT3G20670,AT3G22060,AT3G22540,AT3G23300,AT3G23430,AT3G23620,AT3G23730,AT3G23750,AT3G26420,AT3G27400,AT3G44990,AT3G45010,AT3G48460,AT3G51790,AT3G53250,AT3G53520,AT3G55380,AT3G55510,AT3G56240,AT3G58120,AT3G63120,AT4G00400,AT4G00410,AT4G01450,AT4G02060,AT4G02400,AT4G08950,AT4G10040,AT4G14360,AT4G15410,AT4G15850,AT4G16120,AT4G16230,AT4G18970,AT4G19120,AT4G21850,AT4G22010,AT4G22560,AT4G24510,AT4G25630,AT4G25830,AT4G26210,AT4G27080,AT4G29020,AT4G29510,AT4G30450,AT4G32140,AT4G33220,AT4G34740,AT4G37580,AT4G38710,AT5G04430,AT5G04530,AT5G07110,AT5G11240,AT5G13100,AT5G15640,AT5G16590,AT5G20000,AT5G20250,AT5G22030,AT5G22060,AT5G22740,AT5G23860,AT5G24570,AT5G35620,AT5G42420,AT5G43960,AT5G46940,AT5G48900,AT5G49630,AT5G50210,AT5G50950,AT5G51440,AT5G54380,AT5G55730,AT5G56030,AT5G57020,AT5G57280,AT5G57800,AT5G60710,AT5G61030,AT5G61790,AT5G64030,AT5G67500,AT5G67600 HOU_RGA_DURING-FLOWER_UP Up-regulated by RGA during flower development (Table S1 PubmedID:18502975) nad4L,AT2G26570,AT2G40930,AT5G12400,AT4G14040,AT4G17460,AT4G17120,AT4G15530,AT4G14790,AT1G28260,AT5G04290,AT1G58470,AT1G26270,AT5G20610,AT5G21170,AT5G08350,AT5G28840,AT5G20250,AT4G36730,AT4G36670,AT4G37190,AT1G58180,AT1G58100,AT5G15980,AT5G15850,AT5G27320,AT5G25280,AT5G25060,AT5G25210,AT5G24800,AT5G66050,AT5G66180,AT5G65410,AT5G65120,AT5G64360,AT5G63970,AT5G64120,AT5G63620,AT5G62760,AT5G62570,AT5G58310,AT5G58510,AT5G57580,AT5G57360,AT5G57110,AT5G56870,AT5G56240,AT5G55700,AT5G54080,AT5G54280,AT5G52570,AT5G52580,AT5G52250,AT5G51830,AT5G50780,AT5G50450,AT5G49450,AT5G48180,AT5G44450,AT5G43830,AT5G42940,AT5G41920,AT5G41580,AT5G41080,AT5G40450,AT5G39660,AT5G37260,AT5G37070,AT5G24470,AT5G24490,AT5G23340,AT5G23430,AT5G22920,AT5G23050,AT5G22760,AT5G19120,AT5G18780,AT5G18650,AT5G18670,AT5G18140,AT5G18170,AT5G16650,AT5G17280,AT5G17300,AT5G16340,AT5G14430,AT5G14470,AT5G13760,AT5G13300,AT5G08550,AT5G07440,AT5G06780,AT5G06690,AT5G05550,AT5G05440,AT5G04040,AT5G04440,AT5G02020,AT5G01780,AT5G01810,AT5G01620,AT5G01030,AT5G01240,AT3G62950,AT3G63010,AT3G62150,AT3G61890,AT3G62000,AT3G61600,AT3G61060,AT3G61350,AT3G59930,AT3G59940,AT3G57760,AT3G57520,AT3G55270,AT3G54850,AT3G53180,AT3G52660,AT3G52060,AT3G51270,AT3G50500,AT3G50690,AT3G49790,AT3G49620,AT3G49160,AT3G48690,AT3G48530,AT3G48360,AT3G48520,AT3G48050,AT3G47340,AT3G45730,AT3G45450,AT3G45630,AT4G38440,AT4G38470,AT4G37580,AT4G37610,AT4G36030,AT4G35770,AT4G35750,AT4G35070,AT4G34970,AT4G34400,AT4G34210,AT4G34030,AT4G33240,AT4G33150,AT4G32870,AT4G32040,AT4G31170,AT4G30910,AT4G29950,AT4G29900,AT4G29380,AT4G28830,AT4G28260,AT4G28270,AT4G28300,AT4G27450,AT4G27030,AT4G26620,AT4G26280,AT4G25800,AT4G24050,AT4G24200,AT4G23870,AT4G24020,AT4G24040,AT4G23060,AT4G22080,AT4G21400,AT4G21410,AT4G21560,AT4G20740,AT4G19160,AT4G18170,AT4G18120,AT4G18140,AT4G17840,AT4G12690,AT4G11360,AT4G08500,AT4G05420,AT4G03510,AT4G02350,AT4G01870,AT4G01250,AT4G01026,AT4G00990,AT1G25400,AT1G25560,AT1G67040,AT1G07040,AT1G51745,AT1G58200,AT3G12400,AT3G12590,AT1G66760,AT3G02340,AT3G10980,AT1G75220,AT3G12020,AT3G52240,AT3G13750,AT3G26410,AT3G21870,AT3G23880,AT3G13450,AT3G27260,AT3G23790,AT3G16530,AT3G14990,AT3G17450,AT3G30775,orf105a,AT3G26510,AT3G20340,AT3G29240,AT3G22980,AT3G26690,AT3G25910,AT3G23560,AT3G18035,AT3G13900,AT3G14060,AT3G17960,AT3G15630,AT3G15620,AT3G23430,AT3G22640,AT3G16120,AT3G15355,AT3G15440,AT3G15500,AT3G06850,AT3G05850,AT3G05770,AT3G05680,AT3G07780,AT3G11560,AT3G16390,AT3G16430,AT1G15670,AT1G42705,AT1G77680,AT1G61070,AT1G29400,AT1G49890,AT1G52200,AT1G68440,AT1G76710,AT1G76650,AT1G76350,AT1G72640,AT1G34370,AT1G76590,AT1G76410,AT1G68020,AT1G73660,AT1G70700,AT1G68500,AT1G80420,AT1G80440,AT1G70510,AT1G68200,AT2G43370,AT2G43400,AT2G43330,AT2G43620,AT1G32460,AT1G19540,AT1G15010,AT1G49170,AT1G14650,AT1G78310,AT1G21450,AT1G21400,AT1G02640,AT1G02660,AT1G12240,AT1G53580,AT1G17410,AT1G19610,AT1G12780,AT1G44810,AT1G79700,AT1G07840,AT1G49730,AT1G33060,AT1G18500,AT1G18270,AT1G32630,AT1G50570,AT1G50600,AT1G11520,AT1G80920,AT1G64660,AT1G33790,AT1G64570,AT1G35670,AT1G80160,AT1G56090,AT1G52450,AT1G53885,AT1G73050,AT1G21670,AT1G21680,AT1G31310,AT1G15280,AT1G15330,AT1G13990,AT1G06620,AT1G06570,AT1G62830,AT1G75850,AT1G14870,AT1G23390,AT1G23870,AT2G17520,AT1G03090,AT1G54100,AT2G38820,AT2G14170,AT2G22300,AT2G42620,AT2G17020,AT1G04310,AT1G04300,AT1G26930,AT1G09320,AT2G21470,AT2G40410,AT2G40420,AT2G36400,AT2G35800,AT2G27980,AT1G79190,AT1G02050,AT1G60200,AT1G67480,AT1G54740,AT1G61820,AT1G61890,AT1G78720,AT1G70290,AT1G61810,AT1G27290,AT1G27320,AT1G10140,AT1G27430,AT1G09430,AT1G10070,AT1G30820,AT1G09460,AT1G55810,AT1G09910,AT1G08630,AT1G08570,AT2G17840,AT2G17880,AT1G03590,AT1G03610,AT2G17400,AT1G60740,AT1G27150,AT1G24560,AT1G55540,AT1G62630,AT1G62480,AT1G23760,AT1G23700,AT2G07705,AT2G22720,AT2G22640,AT2G22660,AT2G16595,AT2G20670,AT2G37180,AT2G15890,AT2G15960,AT2G15695,AT2G32150,AT2G24100,AT2G18750,AT2G18700,AT2G45170,AT2G38870,AT2G27830,AT2G46260,AT2G35430,AT2G19800,AT2G19810,AT2G46830,AT2G22860,AT2G22880,AT2G26000,AT2G45920,AT2G39580,AT2G39570,AT2G39200,AT2G41080,AT2G38210,AT2G40000,AT2G02800,AT2G45620,AT2G30500,AT2G30610,AT2G30600,AT2G32710,AT2G26710,AFFX-AThal-25SrRNA HOU_RGA_DURING-FLOWER_DN Down-regulated by RGA during flower development (Table S2 PubmedID:18502975) rps12.1,rpl20,AT1G67750,AT4G25590,AT4G25540,AT4G15210,AT4G14815,AT4G15190,AT4G14695,AT1G28230,AT5G04180,AT1G35180,AT5G09300,AT5G09240,AT5G19580,AT4G36420,AT1G57750,AT1G77310,AT5G15770,AT5G15110,AT5G33370,AT5G26696,AT5G25830,AT5G25190,AT5G25400,AT5G67160,AT5G63060,AT5G61720,AT5G61430,AT5G61480,AT5G61420,AT5G59845,AT5G59350,AT5G59320,AT5G59370,AT5G57810,AT5G57150,AT5G55250,AT5G54970,AT5G54400,AT5G53710,AT5G53820,AT5G53870,AT5G52360,AT5G51810,AT5G51850,AT5G51030,AT5G50030,AT5G50240,AT5G49890,AT5G49280,AT5G48950,AT5G49070,AT5G49270,AT5G48570,AT5G48210,AT5G46690,AT5G45880,AT5G45650,AT5G44400,AT5G42260,AT5G40880,AT5G40830,AT5G40610,AT5G40730,AT5G39840,AT5G39220,AT5G38760,AT5G24090,AT5G18690,AT5G14700,AT5G14380,AT5G14550,AT5G14000,AT5G11790,AT5G11740,AT5G11420,AT5G09980,AT5G09730,AT5G09550,AT5G08540,AT5G08480,AT5G08270,AT5G07990,AT5G07410,AT5G07550,AT5G07510,AT5G07530,AT5G07540,AT5G07560,AT5G06610,AT5G03760,AT5G03170,AT5G03350,AT5G02260,AT5G02490,AT5G02140,AT5G02190,AT5G01870,AT5G01015,AT3G62180,AT3G62230,AT3G62170,AT3G61820,AT3G61160,AT3G57690,AT3G56240,AT3G55350,AT3G54640,AT3G54800,AT3G53900,AT3G52900,AT3G51490,AT3G51280,AT3G50630,AT3G50280,AT3G48460,AT3G47590,AT3G45600,AT3G45680,AT3G45210,AT3G42850,AT4G39950,AT4G39790,AT4G39510,AT4G38460,AT4G35010,AT4G34360,AT4G33790,AT4G32450,AT4G32460,AT4G30850,AT4G30500,AT4G29980,AT4G29340,AT4G28250,AT4G28310,AT4G27652,AT4G28090,AT4G27420,AT4G27720,AT4G25950,AT4G25200,AT4G25420,AT4G25000,AT4G23660,AT4G22010,AT4G13770,AT4G13560,AT4G13345,AT4G12960,AT4G12880,AT4G12910,AT4G11310,AT4G10850,AT4G10380,AT4G09960,AT4G08670,AT4G08685,AT4G07960,AT4G04610,AT4G04460,AT4G03070,AT4G03050,AT4G02410,AT4G02250,AT4G01430,AT4G00780,AT4G00880,AT4G00970,AT2G30320,AT2G40460,AT1G22015,AT1G06990,AT1G18090,AT1G20823,AT1G48750,AT1G51660,AT3G12610,AT3G12520,AT1G54940,AT1G54870,AT3G28810,AT3G28830,AT3G28750,AT3G28760,AT3G28790,AT3G22240,AT3G12000,AT3G13610,AT3G13390,AT3G13400,AT3G15350,AT3G15280,AT3G25050,AT3G12870,AT3G23810,AT1G23570,AT3G28960,AT3G26125,AT3G12750,AT3G15910,AT3G27060,AT3G25170,AT3G13050,AT3G42570,AT3G25585,AT3G21770,AT3G20865,AT3G28980,AT3G25980,AT3G14650,AT3G17790,AT3G21550,AT3G21510,AT3G17990,AT3G23410,AT3G22840,AT3G14380,AT3G17630,AT3G22360,AT3G02570,AT3G02480,AT3G07820,AT3G07850,AT3G05790,AT3G03170,AT3G03430,AT3G01700,AT3G01240,AT3G01270,AT3G11480,AT3G03900,AT3G03910,AT1G13470,AT1G55260,AT1G60960,AT1G71140,AT1G29510,AT1G72260,AT1G73570,AT1G30020,AT1G73680,AT1G78160,AT1G63220,AT1G73220,AT1G74540,AT1G74550,AT1G63890,AT1G68330,AT1G68290,AT1G10930,AT1G17620,AT1G78370,AT1G06260,AT1G06250,AT1G29140,AT1G06000,AT1G26560,AT1G07450,AT1G07370,AT1G19640,AT1G12845,AT1G19970,AT1G20120,AT1G26760,AT1G26710,AT1G35720,AT1G41830,AT1G53070,AT1G07795,AT1G28430,AT1G01070,AT1G18280,AT1G15550,AT1G10640,AT1G16070,AT1G65900,AT1G64670,AT1G33700,AT1G56060,AT1G02790,AT1G52680,AT1G48330,AT1G73010,AT1G72920,AT1G49470,AT1G34770,AT1G11190,AT1G50310,AT1G75910,AT1G75930,AT1G75880,AT1G75900,AT1G75920,AT1G75940,AT1G16500,AT1G43560,AT1G28610,AT1G10770,AT1G13150,AT1G59860,AT1G59740,AT1G79410,AT1G75780,AT1G23240,AT1G23250,AT1G24070,AT1G24020,AT1G78490,AT1G78460,AT1G05540,AT2G16590,AT2G36145,AT2G03830,AT2G04160,AT2G22190,AT2G24800,AT2G21590,AT2G04780,AT1G04520,AT1G26820,AT2G13570,AT2G21490,AT2G46400,AT2G04460,AT2G35860,AT2G28470,AT1G02200,AT1G54860,AT1G22760,AT1G62045,AT1G04220,AT1G03170,AT1G12090,AT1G04730,AT1G04680,AT1G08920,AT1G08730,AT1G24240,AT1G23205,AT1G23130,AT1G61566,AT1G24520,AT1G55570,AT1G62450,AT1G23600,AT1G23520,AT1G23590,AT1G23670,AT2G28355,AT2G18420,AT2G20850,AT2G16750,AT2G07560,AT2G31980,AT2G18470,AT2G37460,AT2G40670,AT2G37975,AT2G38905,AT2G28110,AT2G29350,AT2G46720,AT2G46650,AT2G01610,AT2G01520,AT2G38750,AT2G43310,AT2G43230,AT2G35190,AT2G46140,AT2G46210,AT2G25810,AT2G29790,AT2G47040,AT2G47050,AT2G03090,AT2G28950,AT2G44740,AT2G39330,AT2G34340,AT2G38480,AT2G32560,AT2G38090,AT2G23510,AT2G23800,AT2G39890,AT2G19000,AT2G33850,AT2G30770,AT2G41950,AT2G39710 DEEKEN_LOW-K_UP Low K-induced_list (Table S3 PubmedID:18485061) AT4G34710,AT1G56150,AT3G44870,AT3G44860,AT2G14610,AT1G75040,AT3G46230,AT1G53540,AT1G28480,AT5G18470,AT5G20230,AT5G59820,AT1G77450,AT5G67080,AT5G10380,AT2G46600,AT1G76650,AT1G01470,AT5G52750,AT3G24982,AT2G27080,AT1G09070,AT3G60520,AT3G10930,AT2G35290,AT2G23120,AT1G56060,AT1G19020,AT1G17380 DEEKEN_LOW-NO3_UP Low NO3-induced_list (Table S3 PubmedID:18485061) AT5G01600,AT5G67300,AT3G56400,AT3G49080,AT5G10380,AT1G73500,AT2G26560,AT1G28230,AT5G64410,AT3G56710,AT5G14730,AT5G43150 DEEKEN_GA3_UP Induced-GA3-_list (Table S4 PubmedID:18485061) AT5G67080,AT2G39030 DEEKEN_IAA_UP Induced-IAA-_list (Table S4 PubmedID:18485061) AT3G23030,AT2G30040,AT5G54490 DEEKEN_ZEATIN_UP Induced-zeatin-_list (Table S4 PubmedID:18485061) AT1G05490,AT3G10180,AT3G44500,AT3G47260 DEEKEN_BL_UP Induced-BL_list (Table S5 PubmedID:18485061) AT2G30520,AT2G21330,AT1G15820,AT1G29910,AT1G29920,AT2G05070,AT2G05100,AT2G34420,AT2G34430,AT5G54270,AT3G21055,AT3G47470,AT3G54890,AT1G08380,AT1G30380,AT1G52230,AT4G02770,AT4G28750,AT1G10960,AT5G65730,AT5G13630,AT1G24020,AT1G72610,AT1G76080,AT5G48485,AT3G61220,AT1G43160,AT1G78600,AT1G62750,AT2G02950,AT1G51110,AT3G23410,AT5G54770,AT1G73650,AT1G74730,AT2G04970,AT2G06440,AT2G14140,AT3G44450,AT3G47070,AT5G23060 DEEKEN_RL_UP Induced-RL_list (Table S5 PubmedID:18485061) AT2G30520,AT2G21330,AT1G15820,AT1G29910,AT1G29920,AT2G05070,AT2G05100,AT2G34420,AT2G34430,AT5G54270,AT3G21055,AT3G47470,AT3G54890,AT1G08380,AT1G30380,AT1G52230,AT4G02770,AT4G28750,AT5G65730,AT5G13630,AT1G72610,AT1G76080,AT5G48485,AT3G61220,AT1G43160,AT2G02950,AT1G51110,AT3G23410,AT5G54770,AT1G74730,AT5G23060,AT1G75600,AT4G05180 LIU_MARF10-MUTANT-SEED_UP Up-regulated in mARF10 mutant seeds (comparison of mARF10 and Col wild-type)a (Table 1 PubmedID:17672844) AT4G33560,AT4G27140,AT5G46960,AT5G49360,AT5G15960,AT1G43800,AT2G34430,AT4G27150,AT3G16450,AT1G14940,AT3G56980,AT1G47540,AT3G17520,AT2G40170,AT5G14780,AT1G67330,AT1G55260,AT1G29910,AT5G62340,AT4G25140,AT5G67370,AT5G07330,AT3G04290,AT1G14930,AT4G09600,AT2G45490,AT1G75830,AT2G23630,AT3G63040,AT2G18340,AT4G20230 BJORN_CBF2_UP Over-expressor of the response in CBF2 (Table S7 PubmedID:18088337) AT4G14690,AT3G44990,AT5G08640,AT5G42800,AT3G51240,AT1G56650,AT5G13930,AT4G25630,AT2G20750,AT3G55120,AT2G14610,AT1G64780,AT2G27840,AT4G23990,AT2G29090,AT2G21320,AT2G22510,AT1G01060,AT1G44900,AT4G04750,AT2G40400,AT5G04950,AT2G23910,AT4G34740,AT4G12470,AT4G37750,AT2G20450,AT1G51380,AT3G51870,AT2G14460,AT1G60590,AT5G23310,AT3G52370,AT2G40100,AT4G31870,AT5G46280,AT4G16390,AT4G29650,AT4G27820,AT4G04450,AT2G32220,AT4G02850,AT3G14940,AT3G52720,AT4G11190,AT2G35040,AT1G23205,AT2G02850,AT5G60990,AT2G40010,AT4G10480,AT3G12110,AT2G34660,AT2G37970,AT1G79140,AT4G27030,AT1G78570,AT1G03310,AT1G11600,AT2G31750,AT2G32060,AT1G72730,AT2G25880,AT1G67360,AT3G47430,AT2G34640,AT4G24175,AT3G25110,AT1G62180,AT2G40130,AT4G18810,AT2G25060,AT1G06670,AT4G04350,AT1G61580,AT1G26880,AT3G49010,AT2G24050,AT1G09660,AT2G32640,AT5G10920,AT2G21210,AT4G18890,AT4G10120,AT2G46830,AT2G37510,AT1G65470,AT2G14880,AT2G37160,AT4G29590,AT1G09780,AT2G28000,AT2G21860,AT4G24670,AT2G38210,AT2G19860,AT4G00490,AT2G18230,AT4G11010,AT4G37320,AT4G28780,AT4G00050,AT1G03530,AT4G21610,AT2G19750,AT4G14320,AT1G51170,AT3G16290,AT4G38950,AT3G56070,AT2G37460,AT2G47800,AT2G47990,AT4G21090,AT1G62710,AT1G13160,AT2G41720,AT4G24130,AT2G33180,AT3G52040,AT1G79550,AT1G20950,AT4G24010,AT2G30210,AT3G43600,AT2G28350,AT2G22360,AT2G04030,AT2G37250,AT2G30150,AT4G20440,AT2G21650,AT2G42200 BJORN_6H_14/20C-PFDR_DIFF Significant changes after 6 h at 14 centigrade when compared to the 20 centigrade controls (PFDR 0.01 in the LIMMA test) (Table 1 PubmedID:18088337) AT3G16250,AT1G68010,AT4G26520,AT4G26530,AT4G10120,AT5G20250,AT5G35790,AT3G52720,AT1G60590,AT3G16910,AT5G24150,AT2G42690,AT4G27450,AT1G04350,AT1G44446,AT4G19530,AT3G46530,AT4G09350,AT5G18140,AT1G19660,AT1G13090,AT1G14700,AT5G13730,AT1G08540,AT1G49010,AT5G22920,AT2G34620,AT1G09415,AT3G09210,AT3G45850,AT5G44680,AT3G18750,AT1G63800,AT2G46030,AT1G23390,AT2G45170,AT5G53170,AT3G26510,AT1G64720,AT3G47560,AT1G15740,AT3G62410,AT5G10910,AT3G25690,AT3G02170,AT4G33666,AT4G33670,AT3G06070,AT4G14270,AT3G07310,AT2G03310,AT4G28080,AT3G52070,AT3G09050,AT4G23890,AT4G15545,AT5G42030,AT2G46550,AT4G11960,AT5G52780,AT3G05750,AT3G11590,AT1G09780,AT2G19450,AT5G58700,AT3G13110,AT1G09240,AT5G13930,AT5G17050,AT1G47710,AT2G42540,AT3G22840,AT3G50970,AT3G24170,AT4G34740,AT5G63120,AT1G14580,AT1G68550,AT3G54400,AT5G64420,AT3G14890,AT3G55620,AT2G34650,AT2G25620,AT1G01470,AT5G52820,AT5G44110,AT1G13870,AT4G23630,AT2G03820,AT1G27760,AT3G24190,AT3G13150,AT4G18070,AT1G03250,AT5G47455,AT5G14570,AT2G16890 LALOI_SINGLET-OXYGEN_UP Up-regulated at least 2-fold 30 minutes after the release of singlet oxygen and co-regulated in flu, flu-overexpressing tAPX, wild-type and wild-type- (Table 1 PubmedID:17197417) AT2G26530,AT1G57990,AT3G56710,AT5G15870,AT5G27420,AT5G26920,AT5G66640,AT5G66070,AT5G63790,AT5G62570,AT5G61900,AT5G62020,AT5G61600,AT5G59450,AT5G59550,AT5G57560,AT5G57220,AT5G48540,AT5G46780,AT5G46710,AT5G41740,AT5G35735,AT5G24110,AT5G01540,AT3G61190,AT3G59080,AT3G55980,AT3G52800,AT3G46620,AT3G44260,AT4G39640,AT4G35180,AT4G34135,AT4G24380,AT4G24160,AT4G23190,AT4G22780,AT4G02410,AT4G01870,AT1G17860,AT1G19180,AT3G12580,AT3G15210,AT3G18690,AT3G09020,AT1G20510,AT1G77450,AT1G76690,AT1G76600,AT1G73805,AT1G63720,AT1G72520,AT1G17380,AT1G17420,AT1G14370,AT1G01720,AT1G27730,AT1G80840,AT1G16420,AT1G59910,AT2G40140,AT2G24600,AT2G22500,AT1G24140,AT1G55450,AT1G23710,AT2G29420,AT2G47060,AT2G30020,AT2G38470,AT2G39660,AT4G17230,AT4G14365,AT1G73500,AT1G73540,AT3G56880,AT5G25930,AT5G26030,AT5G66210,AT5G60800,AT5G58430,AT5G47910,AT5G47220,AT5G47070,AT5G45110,AT5G44070,AT5G24590,AT5G22250,AT5G18470,AT5G12940,AT5G12010,AT5G06320,AT3G57530,AT3G54420,AT3G53810,AT3G52400,AT3G50930,AT3G49530,AT3G46930,AT3G46110,AT3G45640,AT3G44720,AT3G44190,AT4G39950,AT4G34390,AT4G34150,AT4G33050,AT4G31800,AT4G29740,AT4G26400,AT4G24570,AT4G23810,AT4G23180,AT4G18880,AT4G17900,AT4G18010,AT4G13180,AT4G12720,AT4G11660,AT4G11280,AT4G02200,AT2G33580,AT1G22190,AT1G51700,AT3G15760,AT3G16720,AT3G08720,AT3G11820,AT3G05200,AT1G01560,AT1G42990,AT1G29690,AT1G73800,AT1G55920,AT1G19770,AT1G27770,AT1G64610,AT1G72900,AT1G72920,AT1G72940,AT1G14200,AT1G13210,AT2G46400,AT2G36220,AT1G61890,AT1G09070,AT1G03730,AT1G24150,AT2G06530,AT2G20145,AT2G42360,AT2G27830,AT2G41100,AT2G23810,AT2G40000,AT2G26190,AT2G44500,AT2G39650,AT1G58420,AT5G10695,AT4G36500,AT1G50740,AT5G25170,AT5G64310,AT5G54490,AT5G52760,AT5G52750,AT5G39670,AT5G13190,AT3G57450,AT4G27280,AT4G02330,AT1G66080,AT3G25600,AT3G04640,AT3G01830,AT1G19020,AT1G63840,AT1G19380,AT1G78410,AT1G32920,AT1G28480 WAN_WT_CHITOOCTAOSE-TREATED_WATER-TREATED_DIFF Differentially regulated by 1.5 fold (P <0.05) in the wild-type plants by chitooctaose 30 minutes after treatment as revealed by the comparison between the chitooctaose-treated and water treated samples. The expression pattern of these genes in the similarly treated mutant plants was also included after the wild-type Data. WT: wild-type Col-0; Mu: the atLysM RLK1 mutant; 8mer: treatment with chitooctaose; water: treatment with distilled water; I, II, and III: biological replicates. False Discovery Rate (Number) of 200 permutations: Median: 0.0% (0), and 90th percentile: 99.9% (889). (Table 1 PubmedID:18263776) AT1G61800,AT1G43910,AT1G21250,AT3G60420,AT5G52760,AT2G25510,AT3G56400,AT4G11890,AT1G72920,AT5G24210,AT5G10380,AT2G46400,AT4G14400,AT3G08860,AT2G43620,AT2G46440,AT1G72930,AT1G65490,AT2G17040,AT1G13340,AT1G31580,AT1G02930,AT4G14365,AT1G71330,AT5G53980,AT4G36110,AT5G51390,AT5G20230,AT1G32450,AT5G56870,AT1G03090,AT4G31730,AT3G52060,AT4G38470,AT4G35380,AT1G72200,AT4G13580,AT3G49790,AT5G02020,AT1G35140,AT4G28040,AT5G63660,AT4G17490,AT2G36690,AT4G26320,AT3G45300,AT1G10070,AT4G12510,AT2G18700,AT1G26800,AT2G17880,AT2G36100,AT1G10480,AT4G35720,AT5G44260,AT1G61590,AT4G19030,AT2G37750,AT3G25930,AT4G28850,AT5G10130,AT1G67030,AT5G04770,AT1G21110,AT1G02360,AT3G29370,AT2G25980,AT4G14980,AT4G40070,AT5G62340,AT3G18560,AT2G28110,AT2G40000,AT3G18200,AT1G03850,AT1G47600,AT5G53250,AT2G39040,AT1G76410,AT1G52050,AT3G16440,AT4G37160,AT5G15180,AT5G54370,AT5G39520,AT3G61060,AT1G15045,AT1G52060,AT3G19430,AT3G21630,AT1G52070,AT1G54050,AT1G12740,AT2G33790,AT1G62560,AT1G36370,AT3G07350,AT3G17990,AT3G18000,AT4G21990,AT4G33960,AT4G37370,AT5G24660,AT5G48850,AT5G25240,AT2G42280,AT2G39650,AT2G39660,AT2G41890,AT2G41880,AT2G19130,AT2G33710,AT2G34930,AT2G26190,AT2G44370,AT2G44490,AT2G44500,AT2G19440,AT2G23680,AT2G23810,AT2G44130,AT2G37540,AT2G41010,AT2G38470,AT2G39200,AT2G39210,AT2G39380,AT2G18980,AT2G44670,AT2G30020,AT2G44940,AT2G44840,AT2G22880,AT2G02860,AT2G47060,AT2G19710,AT2G25735,AT2G29720,AT2G16900,AT2G43320,AT2G38790,AT2G41250,AT2G41310,AT2G27080,AT2G46690,AT2G27660,AT2G28830,AT2G02220,AT2G38870,AT2G12290,AT2G28080,AT2G28120,AT2G37940,AT2G18680,AT2G18690,AT2G05940,AT2G15120,AT2G42360,AT2G35710,AT2G35715,AT2G48010,AT2G01180,AT2G03530,AT2G40100,AT2G32140,AT2G32030,AT2G31990,AT2G32020,AT2G32210,AT2G32190,AT2G27370,AT2G27500,AT2G27310,AT2G20145,AT2G28200,AT2G05540,AT2G15760,AT2G15480,AT2G46620,AT2G46600,AT2G46500,AT2G20960,AT2G20900,AT2G20670,AT2G06530,AT2G18210,AT2G18300,AT2G42950,AT2G43060,AT2G02010,AT2G36770,AT1G23710,AT1G23840,AT1G23830,AT1G30870,AT1G55450,AT1G55460,AT1G61560,AT1G77000,AT1G61260,AT1G24150,AT1G03730,AT1G03740,AT1G08650,AT1G61370,AT1G61360,AT1G61340,AT1G61380,AT1G62300,AT1G70170,AT1G09940,AT2G17740,AT1G05340,AT1G10020,AT1G30810,AT1G10150,AT1G10140,AT1G10340,AT2G25200,AT1G03370,AT1G70420,AT1G61890,AT1G67520,AT1G67470,AT1G22640,AT1G65400,AT1G65390,AT1G79160,AT2G13780,AT2G13790,AT2G31230,AT2G28570,AT2G22500,AT2G21120,AT2G21210,AT2G21200,AT2G42870,AT2G35930,AT2G35980,AT2G36220,AT2G36430,AT2G40270,AT2G24570,AT2G24600,AT1G59970,AT1G26920,AT2G15390,AT2G42620,AT2G31945,AT2G31880,AT2G22300,AT2G17220,AT2G40140,AT2G40230,AT2G24762,AT2G04240,AT2G36090,AT2G38820,AT1G30620,AT1G30750,AT1G30700,AT1G05575,AT1G54120,AT2G18160,AT1G23390,AT1G65790,AT1G59910,AT1G64980,AT1G64700,AT1G14920,AT1G21010,AT1G13210,AT1G28600,AT1G16420,AT1G16410,AT1G14040,AT1G15430,AT1G31290,AT1G34260,AT1G17180,AT1G11310,AT1G11200,AT1G49470,AT1G49500,AT1G72900,AT1G72940,AT1G72950,AT1G73080,AT1G68690,AT1G48330,AT1G75020,AT1G74940,AT1G77900,AT1G59590,AT1G56120,AT1G56060,AT1G64610,AT1G64660,AT1G80840,AT1G80820,AT1G11380,AT1G15980,AT1G15550,AT1G76070,AT1G32700,AT1G32640,AT1G18390,AT1G18380,AT1G27730,AT1G27770,AT1G71697,AT1G14370,AT1G14540,AT1G14550,AT1G14480,AT1G14280,AT1G28370,AT1G28380,AT1G21120,AT1G21130,AT1G21100,AT1G18740,AT1G79680,AT1G53080,AT1G35710,AT1G19970,AT1G20190,AT1G32920,AT1G04770,AT1G19770,AT1G07520,AT1G17380,AT1G17420,AT1G26380,AT1G53440,AT1G53430,AT1G21400,AT1G29160,AT1G21920,AT1G49200,AT1G19380,AT1G62420,AT1G11050,AT1G68330,AT1G68340,AT1G72520,AT1G69840,AT1G69920,AT1G69890,AT1G69270,AT1G63880,AT1G63830,AT1G80440,AT1G63750,AT1G63720,AT1G74330,AT1G68450,AT1G68520,AT1G74440,AT1G74650,AT1G74450,AT1G74360,AT1G70740,AT1G71970,AT1G66400,AT1G78170,AT1G78100,AT1G73805,AT1G73830,AT1G73800,AT1G30040,AT1G68840,AT1G67970,AT1G67880,AT1G76560,AT1G71400,AT1G76700,AT1G76360,AT1G68440,AT1G72280,AT1G29340,AT1G29500,AT1G29690,AT1G71030,AT1G42990,AT1G56510,AT1G35350,AT1G20520,AT1G15670,AT1G19050,AT1G19020,AT1G01560,AT1G02400,AT1G17750,AT3G05320,AT3G05370,AT3G05200,AT3G01260,AT3G07780,AT3G09020,AT3G09010,AT3G05580,AT3G02130,AT3G11650,AT3G09410,AT3G01830,AT3G01440,AT3G04640,AT3G04070,AT3G10720,AT3G11820,AT3G11840,AT3G08710,AT3G08720,AT3G09830,AT3G03020,AT3G04210,AT3G07040,AT3G06890,AT3G06590,AT3G02380,AT3G17330,AT3G16720,AT3G15530,AT3G17700,AT3G14280,AT3G14225,AT3G14370,AT3G16050,AT3G26910,AT3G15760,AT3G14050,AT3G21650,AT3G21670,AT3G24530,AT3G14560,AT3G21260,AT3G21220,AT3G29035,AT3G27560,AT3G28450,AT3G12920,AT3G25250,AT3G26970,AT3G26980,AT3G18710,AT3G18690,AT3G12740,AT3G13310,AT3G25730,AT3G25780,AT3G26510,AT3G15570,AT3G22060,AT3G24290,AT3G20590,AT3G28180,AT3G19680,AT3G19580,AT3G21070,AT3G22540,AT3G19010,AT3G23880,AT3G22970,AT3G22160,AT3G16860,AT3G29400,AT3G25600,AT3G25610,AT3G19970,AT3G28340,AT3G28210,AT3G28850,AT3G28740,AT3G30180,AT1G66160,AT1G66090,AT1G31540,AT1G33560,AT3G10930,AT1G66880,AT1G30370,AT3G11340,AT1G51800,AT1G51620,AT1G51820,AT1G51660,AT1G51700,AT1G20823,AT1G07135,AT1G07000,AT1G07090,AT5G28610,AT1G20310,AT1G67060,AT2G33580,AT1G18570,AT1G25390,AT4G00970,AT4G00955,AT4G01010,AT4G01090,AT4G01250,AT4G01700,AT4G01750,AT4G01950,AT4G02200,AT4G02195,AT4G02330,AT4G02410,AT4G04480,AT4G04540,AT4G04610,AT4G04700,AT4G08850,AT4G09030,AT4G11000,AT4G11300,AT4G11330,AT4G11280,AT4G11660,AT4G11850,AT4G12720,AT4G13510,AT4G18170,AT4G18250,AT4G18880,AT4G19520,AT4G19530,AT5G44810,AT4G20170,AT4G20780,AT4G20830,AT4G21390,AT4G22470,AT4G22710,AT4G23030,AT4G23190,AT4G23200,AT4G23270,AT4G23220,AT4G23180,AT4G23570,AT4G23810,AT4G24160,AT4G24380,AT4G24570,AT4G25030,AT4G25390,AT4G25810,AT4G26120,AT4G26200,AT4G26400,AT4G26530,AT4G27280,AT4G27410,AT4G28085,AT4G28240,AT4G28290,AT4G28400,AT4G29050,AT4G29190,AT4G29780,AT4G30210,AT4G30350,AT4G30280,AT4G30430,AT4G31500,AT4G31550,AT4G31800,AT4G32020,AT4G32300,AT4G33050,AT4G33060,AT4G33010,AT4G33160,AT4G33300,AT4G33440,AT4G33920,AT4G33985,AT4G34150,AT4G34390,AT4G34760,AT4G34460,AT4G34770,AT4G34970,AT4G35480,AT4G35600,AT4G36030,AT4G36040,AT4G37710,AT4G38550,AT4G38860,AT4G38850,AT4G39030,AT4G38940,AT4G39570,AT4G39640,AT4G39670,AT4G39830,AT4G40080,AT4G39890,AT3G44260,AT3G44630,AT3G44720,AT3G45640,AT3G45730,AT3G46110,AT3G46620,AT3G46530,AT3G46930,AT3G47570,AT3G48090,AT3G48520,AT3G49350,AT3G49530,AT3G49940,AT3G50060,AT3G50480,AT3G50750,AT3G50760,AT3G50950,AT3G50930,AT3G50900,AT3G51400,AT3G51660,AT3G52070,AT3G51920,AT3G52450,AT3G52400,AT3G52430,AT3G52800,AT3G53280,AT3G53400,AT3G53810,AT3G54420,AT3G55150,AT3G55470,AT3G55430,AT3G55950,AT3G55840,AT3G55980,AT3G56410,AT3G57040,AT3G57530,AT3G57450,AT3G57550,AT3G58990,AT3G59080,AT3G59310,AT3G59700,AT3G59940,AT3G60550,AT3G61190,AT3G62150,AT3G62260,AT3G62410,AT3G62720,AT3G63210,AT3G63200,AT5G01210,AT5G01560,AT5G01540,AT5G01830,AT5G01950,AT5G01740,AT5G02230,AT5G02290,AT5G02760,AT5G03210,AT5G03230,AT5G04470,AT5G04550,AT5G04720,AT5G05190,AT5G05300,AT5G06200,AT5G06320,AT5G06740,AT5G08240,AT5G09800,AT5G11000,AT5G11250,AT5G11650,AT5G12880,AT5G13200,AT5G13190,AT5G14700,AT5G15130,AT5G17350,AT5G17300,AT5G18060,AT5G18150,AT5G18470,AT5G18400,AT5G18490,AT5G19240,AT5G19120,AT5G22250,AT5G22530,AT5G22690,AT5G22920,AT5G23510,AT5G24110,AT5G24580,AT5G35580,AT5G35735,AT5G37260,AT5G37490,AT5G37770,AT5G38210,AT5G38990,AT5G39020,AT5G39580,AT5G39610,AT5G39670,AT5G39780,AT5G39785,AT5G40170,AT5G40540,AT5G40590,AT5G40910,AT5G41100,AT5G41180,AT5G41740,AT5G42010,AT5G42050,AT5G42440,AT5G42380,AT5G42650,AT5G43170,AT5G44060,AT5G44070,AT5G44680,AT5G44580,AT5G44820,AT5G44870,AT5G44910,AT5G45070,AT5G45090,AT5G45110,AT5G45340,AT5G46080,AT5G46330,AT5G46295,AT5G46450,AT5G46470,AT5G46490,AT5G46780,AT5G46710,AT5G46910,AT5G47070,AT5G47220,AT5G47230,AT5G47370,AT5G47960,AT5G48380,AT5G48430,AT5G48540,AT5G48655,AT5G49520,AT5G49700,AT5G50760,AT5G51190,AT5G52050,AT5G52670,AT5G52710,AT5G52750,AT5G52910,AT5G53830,AT5G54490,AT5G54720,AT5G54860,AT5G56340,AT5G57190,AT5G57220,AT5G57510,AT5G57540,AT5G57660,AT5G57560,AT5G58120,AT5G58430,AT5G58260,AT5G58630,AT5G58940,AT5G59080,AT5G59450,AT5G59550,AT5G59730,AT5G59780,AT5G59820,AT5G60270,AT5G60680,AT5G60800,AT5G61210,AT5G61560,AT5G61590,AT5G61600,AT5G61900,AT5G62020,AT5G62150,AT5G62280,AT5G62570,AT5G63130,AT5G63370,AT5G64300,AT5G64310,AT5G64660,AT5G64890,AT5G64870,AT5G64905,AT5G65210,AT5G65300,AT5G65530,AT5G65660,AT5G66070,AT5G66210,AT5G66640,AT5G66650,AT5G67340,AT5G67450,AT5G67420,AT5G25260,AT5G25170,AT5G25190,AT5G25350,AT5G25280,AT5G25930,AT5G26030,AT5G26920,AT5G27420,AT1G50740,AT5G15830,AT5G15850,AT5G15730,AT5G15870,AT1G51890,AT1G16670,AT3G56880,AT3G56710,AT3G51890,AT4G36500,AT4G36540,AT4G36430,AT4G36550,AT5G28630,AT5G20150,AT5G10695,AT5G13180,AT5G20790,AT1G57990,AT1G58410,AT1G58420,AT1G35210,AT1G33600,AT1G73540,AT1G73500,AT5G04340,AT1G28190,AT1G25370,AT4G14450,AT4G14630,AT4G16860,AT4G16950,AT4G16960,AT4G15975,AT4G15550,AT4G17500,AT4G14680,AT4G17250,AT4G17230,AT1G58842,AT1G59124,AT3G29970,AT1G67810,AT5G12340,AT2G47440,AT2G47550,AT2G45210,AT2G40900,AT2G41640,AT2G23320,AT2G26560,AT2G26530,AT1G27100,AT3G45800,AT1G16130,AT1G43000,AT3G02800,AT3G21520 WAN_MUTANT_CHITOOCTAOSE-TREATED_WATER-TREATED_DIFF Differentially regulated by 1.5 fold (P <0.05) in the mutant by chitooctaose 30 minutes after treatment as revealed by the comparison between the chitooctaose-treated and water treated samples. The expression pattern of these genes in the similarly treated wild-type plants was also included after the mutant Data. WT: wild-type Col-0; Mu: the atLysM RLK1 mutant; 8mer: treatment with chitooctaose; water: treatment with distilled water; I, II, and III: biological replicates. False Discovery Rate (Number) of 200 permutations: Median: 0.0% (0), and 90th percentile: 97.0% (32). (Table 2 PubmedID:18263776) AT4G11890,AT5G20230,AT5G02020,AT1G62560,AT1G36370,AT3G07350,AT3G17990,AT3G18000,AT4G21990,AT4G33960,AT4G37370,AT5G24660,AT5G48850,AT5G25240,AT5G42800,AT2G04070,AT3G26830,AT2G26400,AT2G04050,AT4G39675,AT2G34390,AT3G43190,AT2G14560,AT2G24850,AT2G18190,AT1G65860,AT1G21910,AT3G22231,AT4G20390,AT4G22870,AT4G23140,AT5G35490,AT4G14690 WAN_MUTANT_DIFF Differentially regulated by 1.5 fold (P <0.05) in the mutant plants due to the mutation, as revealed by the comparison between the water-treated mutant and water treated wild-type samples. The expression pattern of these genes in the wild-type and mutant plants in response to chitooctaose was also included after the Mu-water/WT-water comparison. WT: wild-type Col-0; Mu: the atLysM RLK1 mutant; 8mer: treatment with chitooctaose; water: treatment with distilled water; I, II, and III: biological replicates. False Discovery Rate (Number) of 200 permutations: Median: 0.0% (0), and 90th percentile: 99.7% (315). (Table 3 PubmedID:18263776) AT4G11890,AT1G61800,AT1G43910,AT1G21250,AT3G60420,AT5G52760,AT2G25510,AT3G56400,AT1G72920,AT5G24210,AT5G10380,AT2G46400,AT4G14400,AT3G08860,AT2G43620,AT2G46440,AT1G72930,AT1G65490,AT2G17040,AT1G13340,AT1G31580,AT1G02930,AT4G14365,AT1G71330,AT3G26830,AT2G04070,AT2G04050,AT2G26400,AT5G42800,AT2G18660,AT2G14610,AT1G80130,AT3G50770,AT2G29350,AT5G03860,AT4G39210,AT5G60250,AT5G03350,AT3G51860,AT1G19960,AT1G65500,AT3G17910,AT3G28540,AT2G37770,AT1G75040,AT5G64000,AT4G23600,AT1G21520,AT2G43530,AT3G44450,AT3G22550,AT1G62710,AT3G16660,AT2G43570,AT1G73120,AT5G53420,AT3G03640,AT3G45140,AT1G02850,AT2G41090,AT1G69730,AT3G47480,AT5G55450,AT5G17760,AT2G25625,AT1G69490,AT3G04000,AT4G23680,AT2G47780,AT2G33380,AT3G43270,AT5G62140,AT2G37760,AT4G11460,AT2G43510,AT2G36970,AT1G71140,AT4G21680,AT4G09350,AT4G24120,AT1G64900,AT3G49580,AT5G44390,AT1G70810,AT1G67100,AT2G33530,AT2G29630,AT3G28930,AT4G08870,AT4G09020,AT5G13490,AT2G29670,AT2G37240,AT2G28900,AT1G28670,AT4G17770,AT2G26440,AT1G62290,AT5G17860,AT4G05390,AT5G02020,AT5G39520,AT4G35720,AT2G28110,AT1G76410,AT5G53980,AT1G12740,AT1G03850,AT3G52060,AT1G10070,AT5G44260,AT3G29370,AT1G26800,AT4G37160,AT4G26320,AT2G17880,AT4G28040,AT5G56870,AT2G18700,AT1G67030,AT1G15045,AT4G12510,AT5G10130,AT1G54050,AT2G37750,AT1G47600,AT3G16440,AT1G32450,AT4G19030,AT2G25980,AT5G51390,AT3G45300,AT1G61590,AT4G36110,AT4G13580,AT1G72200,AT4G28850,AT3G18200,AT1G10480,AT3G61060,AT2G33790,AT4G38470,AT5G15180,AT1G52070,AT1G52060,AT5G04770,AT4G40070,AT5G54370,AT3G25930,AT4G14980,AT3G49790,AT5G63660,AT1G52050,AT2G39040,AT4G31730,AT5G62340,AT1G03090,AT5G53250,AT3G19430,AT2G36100,AT5G20230,AT1G35140,AT4G35380,AT2G36690,AT3G21630,AT3G18560,AT2G40000,AT1G02360,AT1G21110,AT4G17490,AT4G39675,AT2G34390,AT3G43190,AT1G45145,AT5G67400,AT2G21045,AT4G30290,AT2G32150,AT1G18330,AT1G54970,AT2G28670,AT1G18400,AT3G51330,AT5G41080,AT5G44920,AT5G49450,AT5G59090,AT1G19540,AT3G23190,AT3G13650,AT5G05500,AT5G40510,AT3G01420,AT4G25820,AT1G77330,AT1G43800,AT4G25790,AT1G76600,AT4G15093,AT1G22440,AT3G26760,AT5G42180,AT5G42250,AT1G11580,AT3G01190,AT4G30170,AT3G43430,AT4G15390,AT4G12080,AT3G59930,AT1G04250,AT5G42500,AT5G50560,AT2G44380,AT3G10020,AT3G13710,AT1G73330,AT4G17800,AT2G22860,AT1G14960,AT4G20110,AT4G26220,AT5G07080,AT5G51060,AT2G44790,AT1G73010,AT1G25400,AT1G15210,AT4G01480,AT5G48070,AT5G19890,AT3G25900,AT4G00680,AT3G54580,AT5G13870,AT3G22570,AT4G25220,AT3G49960,AT4G15160,AT3G53980,AT4G14550,AT1G74500,AT3G05920,AT5G35190,AT2G44010,AT1G26250,AT2G28190,AT1G70850,AT5G57530,AT1G72360,AT1G08500,AT5G48570,AT4G01680,AT4G37010,AT2G43610,AT3G62680,AT3G28550,AT1G72060,AT1G50060,AT3G29575,AT4G30670,AT1G01750,AT1G18980,AT3G23800,AT4G31320,AT3G49780,AT5G04960,AT5G47450,AT1G64470,AT1G06120,AT4G00080,AT5G10430,AT5G66280,AT1G09090,AT1G74660,AT3G19390,AT2G19590,AT1G20900,AT4G08410,AT4G33790,AT5G56540,AT2G04800,AT5G54510,AT3G21710,AT4G13235,AT5G44610,AT1G65310,AT3G48100,AT1G34510,AT3G22800,AT3G45710,AT2G01530,AT2G31085,AT5G06570,AT1G80240,AT1G13420,AT2G20520,AT2G32270,AT1G19530,AT3G30720,AT1G19900,AT5G02200,AT3G45700,AT1G60740,AT4G02090,AT5G07010,AT1G49570,AT4G27260,AT2G42850,AT1G74310,AT1G30720,AT5G60660,AT2G45220,AT1G59860,AT5G39110,AT1G59500 WAN_FLG22_ELF26_CHITOOCTAOSE_COMMON_DIFF Commonly Regulated by flg22, elf26, and Chitooctaose (Table 4 PubmedID:18263776) AT3G01830,AT1G05575,AT5G24110,AT4G23810,AT2G22880,AT5G42380,AT5G52760,AT1G80840,AT4G24570,AT5G64905,AT1G21110,AT1G73540,AT4G29780,AT5G52750,AT1G14540,AT5G57220,AT5G51190,AT5G27420,AT2G32030,AT2G25735,AT4G39670,AT1G30370,AT3G10930,AT1G27730,AT2G40000,AT5G54490,AT5G39670,AT1G19020,AT1G72520,AT2G44840,AT5G59820,AT3G50930,AT4G01250,AT5G05300,AT5G61600,AT2G26530,AT5G04340,AT3G55840,AT1G56060,AT2G46400,AT1G65390,AT3G61190,AT3G55980,AT2G32210,AT5G20230,AT1G58420,AT2G41640,AT4G18880,AT2G33580,AT1G20310,AT3G18710,AT2G38470,AT5G47230,AT1G57990,AT5G39580,AT2G17040,AT2G35930,AT1G23710,AT5G22250,AT4G14450,AT3G52400,AT4G21390,AT1G26380,AT2G24600,AT1G61560,AT2G32190,AT4G14365,AT4G15975,AT5G41740,AT5G17350,AT1G01560,AT2G30020,AT4G27280,AT5G57560,AT5G52050,AT4G31550,AT4G23190,AT1G18570,AT1G07000,AT1G17420,AT1G72920,AT2G31880,AT1G61340,AT2G35710,AT3G44260,AT5G25930,AT5G28630,AT4G11280,AT3G56710,AT2G39200,AT5G67450,AT5G66210,AT4G37370,AT1G66160,AT3G04640,AT2G40140,AT2G36220,AT5G66650,AT5G45340,AT4G36500,AT2G18680,AT5G59550,AT4G17490,AT1G35210,AT5G01540,AT3G57530,AT4G33050,AT1G19770,AT1G59590,AT1G72900,AT2G22500,AT2G36690,AT5G26920,AT2G33710,AT3G54420,AT5G59730,AT3G16720,AT2G26190,AT3G52450,AT3G46620,AT4G30280,AT3G49530,AT3G11840,AT3G46930,AT5G35735,AT2G39650,AT2G41010,AT5G15870,AT1G63750,AT1G28370,AT1G69890,AT3G08720,AT1G74650,AT5G64870,AT4G31800,AT4G26200,AT3G18690,AT5G64660,AT3G28340,AT5G06320,AT4G39640,AT1G73800,AT1G32920,AT3G02800,AT3G25250,AT3G11820,AT2G44370,AT4G39830,AT5G44070,AT5G14700,AT4G23180,AT1G21010,AT1G55450,AT5G47070,AT3G17700,AT1G02400,AT1G30700,AT5G61560,AT5G39020,AT2G44500,AT1G11050,AT2G01180,AT2G23810,AT5G61900,AT1G16130,AT1G18740,AT1G61360,AT2G26560,AT1G43000,AT1G19380,AT3G59080,AT4G12720,AT4G02410,AT4G02200,AT1G29690,AT1G73805,AT1G70740,AT2G02010,AT4G01700,AT2G40270,AT2G27080,AT5G58430,AT1G63720,AT1G27770,AT4G11000,AT4G00970,AT3G09830,AT1G59910,AT4G17230,AT1G50740,AT3G45640,AT4G34150,AT5G48540,AT2G20960,AT3G16860,AT3G56880,AT5G65300,AT3G57450,AT4G34390,AT4G30430,AT1G20823,AT1G51700,AT3G05370,AT4G36550,AT5G28610,AT3G25600,AT3G20590,AT1G28380,AT4G17500,AT5G37770,AT5G18470,AT3G26980,AT2G27660,AT3G09020,AT5G66640,AT4G35480,AT5G62570,AT5G02290,AT3G50060,AT4G39890,AT4G18170,AT1G56510,AT1G68690,AT2G47060,AT3G19580,AT1G13210,AT1G10340,AT2G34930,AT5G62150,AT4G28400,AT4G24380,AT1G42990,AT5G66070,AT5G22690,AT4G02330,AT1G07135,AT5G44910,AT1G66880,AT3G10720,AT1G74450,AT1G14370,AT5G59450,AT3G50950,AT4G01950,AT4G17250,AT5G48380,AT5G46780,AT5G42050,AT5G09800,AT4G33920,AT4G28085,AT3G25610,AT5G49520,AT5G38210,AT5G05190,AT1G71400,AT2G20145,AT3G56410,AT3G44720,AT4G01090,AT1G51620,AT1G51660,AT3G21520,AT1G67880,AT2G13790,AT1G24150,AT3G28210,AT3G21070,AT3G05200,AT2G42360,AT5G37490,AT5G11650,AT1G51800,AT3G26910,AT1G70420,AT5G61210,AT5G41100,AT1G53080,AT1G18390,AT2G37940,AT5G26030,AT5G58940,AT5G13190,AT1G07520,AT1G21100,AT5G64310,AT4G20780,AT2G31945,AT2G18210,AT2G32020,AT1G27100,AT1G74440,AT1G72940,AT2G02220,AT1G67810,AT5G18150,AT3G62260,AT3G53280,AT3G46110,AT4G39570,AT4G38550,AT4G11300,AT1G74360,AT1G17380,AT1G14480,AT2G35980,AT2G27310,AT5G58120,AT5G19240,AT4G34460,AT4G26400,AT4G11330,AT2G19130,AT2G23320,AT5G64890,AT3G53810,AT4G08850,AT3G25780,AT1G80820,AT2G39660,AT3G51920,AT4G04540,AT3G05320,AT1G69840,AT5G04720,AT3G55150,AT4G24160,AT3G19010,AT3G15760,AT1G61370,AT5G40540,AT5G18490,AT3G48090,AT4G25810,AT3G09410,AT1G09940,AT2G39210,AT1G33600,AT5G63130,AT4G38940,AT4G32020,AT1G69920,AT1G18380,AT1G75020,AT1G62300,AT2G05940,AT1G16670,AT4G36030,AT4G23270,AT4G04480,AT3G22160,AT3G18560,AT1G02360,AT1G79680,AT1G76070,AT2G46620,AT2G18690,AT5G46910,AT5G44060,AT4G33300,AT3G07040,AT1G53430,AT5G12340,AT5G46710,AT4G35600,AT4G20830,AT1G25390,AT1G30040,AT1G03370,AT5G46470,AT4G01010,AT3G22060,AT1G76360,AT1G73080,AT2G32140,AT5G13200,AT4G30210,AT1G13340,AT1G35350,AT1G69270,AT2G27500,AT1G28190,AT5G25260,AT5G01830,AT5G01560,AT2G17220,AT4G33985,AT3G11650,AT1G76700,AT1G62422,AT3G51890,AT5G45110,AT5G40170,AT5G10380,AT3G47570,AT3G21630,AT1G21130,AT5G25170,AT5G12880,AT1G72280,AT1G03740,AT2G29720,AT3G62720,AT3G05580,AT5G15730,AT5G67340,AT4G01750,AT1G67060,AT3G28850,AT1G64610,AT2G21120,AT3G16030,AT5G62020,AT5G42010,AT3G59700,AT3G52430,AT3G19970,AT2G06530,AT2G19710,AT5G44870,AT5G18400,AT5G15130,AT5G11000,AT4G25390,AT1G67970,AT1G30620,AT2G31230,AT1G03730,AT2G38870,AT2G02860,AT1G51890,AT3G50900,AT1G23830,AT2G23680,AT5G48430,AT5G46295,AT4G40080,AT2G43320,AT2G21210,AT2G42280,AT2G41310,AT5G15850,AT2G18300,AT2G12290,AT2G46690,AT5G03230,AT5G24660,AT1G68520,AT1G26920,AT3G59940,AT5G20790,AT4G34760,AT4G38860 NOZUE_DARK-INDUCED-GROWTH_DIFF Higher significantly expression in dark-induced growth periods (Table 1 PubmedID:17589502) AT1G22770,AT3G47500,AT2G43010,AT1G06040,AT1G73480,AT3G59060,AT5G06980,AT5G64170,AT2G23170,AT3G12320,AT1G80130,AT5G02810,AT5G57660,AT5G07010,AT1G18330,AT3G10113,AT3G22840,AT5G67060,AT5G01790,AT4G27260,AT4G36110,AT3G59900,AT4G25420,AT4G37770,AT3G21720,AT5G54190,AT4G32280,AT1G64660,AT3G47420,AT2G47780,AT3G54500,AT5G02540,AT5G39860,AT4G30140,AT4G28720,AT3G15540,ATMG00660,AT2G29650,AT5G44440 NOZUE_DARK-PERIODS-NONGROWTH_DIFF Higher significantly expression in dark periods without growth (Table 2 PubmedID:17589502) AT3G07650,AT3G48360,AT5G37260,AT4G17090,AT5G61590,AT5G49730,AT5G49740,AT3G62410,AT3G15630,AT5G06690,AT4G37610,AT2G25510,AT5G11070,AT5G65730,AT1G23390,AT4G04330,AT5G20250,AT1G66100,AT1G65490,AT3G30775,AT3G19030,AT1G78020,AT1G54740,AT2G19800 DOHMANN_DNA-DAMAGE_CSN-MUTANT_DIFF Differentially expressed in response to DNA damage and their expression in csn mutants (Table S2 PubmedID:18434413) AT5G20850,AT5G66130,AT5G64520,AT5G45400,AT4G35740,AT4G21070,AT4G19130,AT4G02390,AT1G07745,AT1G49980,AT1G08260,AT2G31320 DOHMANN_ATH1-GENECHIP_DIFF Represented on the atH1 GeneChip (Table S2 PubmedID:18434413) AT2G45280,AT2G47590,AT4G25540,AT4G17760,AT4G17380,AT4G17020,AT1G27880,AT1G27840,AT5G28740,AT5G20850,AT4G37010,AT1G16590,AT5G27680,AT5G27620,AT5G26675,AT5G24850,AT5G66130,AT5G64520,AT5G63960,AT5G62540,AT5G61000,AT5G58760,AT5G57970,AT5G57450,AT5G57160,AT5G54260,AT5G54090,AT5G53770,AT5G48120,AT5G45400,AT5G44680,AT5G44750,AT5G44740,AT5G41150,AT5G40820,AT5G40450,AT5G38470,AT5G22470,AT5G16630,AT5G08020,AT5G02820,AT3G52560,AT3G50880,AT3G50360,AT3G48190,AT3G48420,AT3G46940,AT4G36050,AT4G35520,AT4G35740,AT4G32700,AT4G30820,AT4G25120,AT4G21070,AT4G21100,AT4G19130,AT4G12740,AT4G08920,AT4G09140,AT4G08580,AT4G05420,AT4G02460,AT4G02390,AT4G02070,AT4G00020,AT1G18040,AT1G16970,AT1G66750,AT1G66730,AT1G75230,AT3G28770,AT3G12040,AT3G18630,AT3G22880,AT3G19210,AT3G24320,AT3G14890,AT3G28030,AT1G80850,AT3G13270,AT3G20475,AT3G12710,AT3G18525,AT3G23100,AT3G26680,AT3G15620,AT3G02540,AT3G02920,AT3G07930,AT3G02060,AT3G05740,AT3G10140,AT3G05480,AT3G05210,AT1G12370,AT1G60930,AT1G29630,AT1G75090,AT1G68760,AT1G73690,AT1G70660,AT1G80420,AT1G10930,AT1G48050,AT1G02670,AT1G07370,AT1G05900,AT1G79650,AT1G07745,AT1G14400,AT1G49980,AT1G50030,AT1G18340,AT1G08130,AT1G08260,AT1G65070,AT1G52500,AT1G52530,AT1G49250,AT1G21710,AT1G31360,AT1G16190,AT1G11780,AT1G23260,AT2G31450,AT1G10520,AT1G04400,AT2G36060,AT2G28560,AT1G79050,AT2G31320,AT1G67500,AT1G78870,AT1G03190,AT1G27410,AT1G55610,AT1G55750,AT1G04020,AT1G05050,AT2G06510,AT2G31970,AT2G24490,AT3G32920,AT2G18760,AT2G29570,AT2G27120,AT2G26980,AT2G01440,AT2G41460,AT2G02760 TIAN_ALBINO-MUTANT_UP Up-regulated genes (top 50)in the albino mutant (Table S2 PubmedID:17468106) AT3G12320,AT1G19670,AT1G54020,AT2G40670,AT5G24420,AT4G19170,AT3G12710,AT1G62770,AT3G25760,AT2G40610,AT3G28270,AT5G62920,AT1G18710,AT4G12510,AT1G14280,AT3G47500,AT1G29395,ATCG00350,AT2G39330,AT1G18400,AT3G54500,AT5G50335,ATCG00720,AT5G49730,AT3G27690,AT1G71030,AT5G02760,AT1G52030,AT1G02340,AT4G11290,AT5G57760,AT1G19050,AT1G80130,AT5G45820,AT1G73480,AT3G23880,AT1G72260,AT1G04240,AT2G43010,AT4G38860,AT2G18300,ATCG00340,AT5G24580,AT5G64170,AT5G48900,AT1G22770,AT1G29430,AT3G28220,AT1G11080,AT5G06980 TIAN_ALBINO-MUTANT_DN Down-regulated genes(top 50) in the albino mutant (Table S2 PubmedID:17468106) AT4G12480,AT2G38940,AT4G19810,AT4G22470,AT4G23680,AT1G21310,AT1G22690,AT4G12490,AT2G18660,AT3G08860,AT3G59930,AT4G16563,AT3G57260,AT4G12500,AT3G50770,AT3G13790,AT5G43580,AT3G20370,AT5G39580,AT4G25810,AT1G17710,AT3G29970,AT4G15210,AT1G73010,AT3G46280,AT5G44380,AT5G20230,AT1G03850,AT1G43910,AT4G02330,AT2G45130,AT1G76930,AT2G41380,AT1G78000,AT2G37770,AT4G25000,AT2G15130,AT1G15040,AT2G16060,AT3G01290,AT3G29250,AT4G32650,AT3G50930,AT5G20790,AT1G13750,AT1G54010,AT5G43370,AT1G23140,AT1G30700,AT3G29810 LIU_AGL24_UP Upregulated -AGL24 -genes by microarray analysis (Table S1 PubmedID:18339670) AT3G13310,AT3G55970,AT5G59320,AT3G22640,AT1G69880,AT3G50480,AT1G78380,AT5G12010,AT1G17020,AT2G37710,AT2G02120,AT4G18280,AT5G41040,AT5G35940,AT3G55390,AT5G13030,AT1G66800,AT1G26560,AT2G37430,AT1G43910,AT4G36680,AT3G44540,AT5G02230,AT1G14350,AT3G21370,AT3G12830,AT1G59860,AT3G04320,AT1G05510,AT4G26740,AT5G37690,AT1G65510,AT3G21220,AT3G63040,AT3G54400,AT5G47610,AT5G55930,AT2G45660,AT3G60720,AT1G47870,AT4G27630,AT5G05920,AT1G63050,AT5G52580,AT2G39700,AT3G28930,AT1G68570,AT5G61310,AT3G63090,AT5G66400,AT1G73190,AT1G33960,AT5G63150,AT5G18760,AT4G02330,AT3G56290,AT3G02480,AT4G23300,AT5G12030,AT1G21010,AT4G28200,AT4G10280,AT2G27550,AT5G65120,AT3G50060,AT4G32915,AT2G15760,AT5G23070,AT1G52400,AT1G57630,AT5G44400,AT3G50640,AT4G28440,AT2G19990,AT5G53480,AT1G07390,AT5G62520,AT1G70460,AT5G27740,AT5G57550,AT3G29770,AT4G26200,AT2G25620,AT1G09300,AT5G03150,AT1G18100,AT5G19970 LIU_AGL24_DN Downregulated -AGL24 -genes by microarray analysis (Table S1 PubmedID:18339670) AT1G49570,AT5G19890,AT1G34510,AT3G58990,AT5G23020,AT1G21310,AT4G40090,AT1G30760,AT4G12030,AT5G57530,AT1G60680,AT1G18400,AT5G22410,AT5G22500,AT3G25930,AT2G15880,AT4G17340,AT5G05860,AT5G47450,AT5G22270,AT1G34430,AT1G50300,AT4G02680,AT1G72200,AT1G27460,AT5G53880,AT3G29185,AT5G64100,AT5G43270,AT5G18140,AT1G23030,AT2G16640,AT3G57490,AT5G56540,AT5G53440,AT5G24450,AT5G02150,AT1G23180,AT3G21230,AT1G08600,AT3G55500,orf111d,AT1G68400,AT2G25000,AT3G06770,AT4G38060,AT5G41060,AT4G20870,AT3G16260,AT4G02195,AT5G58860,AT3G52720,AT1G12830,AT5G38850,AT2G28940,AT3G03190,AT3G42630,AT3G10710,AT5G15930,AT4G35340,AT5G44800,AT2G42190,AT3G49310,AT3G21710,AT4G26160,AT5G16440,AT5G25520,AT4G30290,AT4G13340,AT1G07560,AT5G06710,AT3G45630,AT4G15340,AT1G72030,AT2G39630,AT5G12480,AT3G56830,AT1G04240,AT1G18730,AT5G57170,AT1G02360,AT2G25950,AT5G47690,AT4G35910,AT1G19720,AT4G18970,AT2G32860,AT5G27320,AT4G18640,AT5G23590,AT1G54210,AT3G09670,AT3G18170,AT3G48460,AT1G63470,AT2G46070,AT4G21680 NISHIMURA_AHG1-1_UP Higher level expressed in ahg1-1 (Table 3 PubmedID:17461784) AT4G27150,AT5G54740,AT5G50600,AT4G27140,AT1G03880,AT4G27160,AT1G18100,AT2G42000,AT3G56350,AT2G02120,AT4G09610,AT5G07360,AT3G27660,AT3G53040,AT3G05260 NISHIMURA_AHG1-1_DN Lower level expressed in ahg1-1 (Table 3 PubmedID:17461784) AT4G37160,AT1G55670,AT1G61520,AT1G12240,AT1G69780,AT2G34870,AT3G02120,AT1G43800,AT5G47500,AT5G48110,AT1G02205,AT5G35940,AT5G54370,AT5G62340 NISHIMURA_AHG1-1-THAN-AHG3-1_ABA_DIFF More strongly affected by ahg1-1 than ahg3-1 in germination in the presence of ABA (Table 3 PubmedID:17461784) AT4G27150,AT5G54740,AT5G50600,AT4G27140,AT1G03880,AT4G27160,AT1G18100,AT2G42000,AT3G56350,AT2G02120,AT4G09610,AT5G07360,AT3G27660,AT3G53040,AT3G05260,AT4G37160,AT1G55670,AT1G61520,AT1G12240,AT1G69780,AT2G34870,AT3G02120,AT1G43800,AT5G47500,AT5G48110,AT1G02205,AT5G35940,AT5G54370,AT5G62340,AT2G36270,AT2G40170,AT5G51760,AT3G11410,AT4G26080,AT5G57050,AT1G72770,AT1G17550 PALATNIK_JAW-1D_DN Down regulated at least 4 times in jaw-1D plants (Table 2 PubmedID:12931144) AT3G15030,AT3G45140,AT3G16670,AT1G31680,AT4G14400,AT3G60420,AT3G25760,AT1G31690,AT2G29290,AT1G23130,AT5G57760,AT4G16760,AT1G54040,AT5G18600,AT2G40670,AT1G53230,AT2G32160,AT3G05730,AT4G17470,AT4G23300,AT4G18390,AT4G15660,AT4G19430,AT1G13650,AT2G21210,AT2G29300,AT2G43590,AT4G15440,AT2G14560,AT1G30210,AT2G33810,AT5G58310,AT1G19180 ALONSO_ETHYLENE_UP Induced regualted genes to Ethylene (Table S4 PubmedID:12893945) AT1G03790,AT1G03880,AT1G04310,AT1G05010,AT1G05020,AT1G06080,AT1G08630,AT1G09530,AT1G09680,AT1G10060,AT1G11950,AT1G14770,AT1G17710,AT1G17810,AT1G18100,AT1G19530,AT1G19900,AT1G21270,AT1G21400,AT1G21910,AT1G23730,AT1G24530,AT1G25320,AT1G25560,AT1G26220,AT1G26290,AT1G26380,AT1G28370,AT1G28520,AT1G30960,AT1G33260,AT1G33790,AT1G34290,AT1G35880,AT1G36060,AT1G43160,AT1G44830,AT1G48390,AT1G49210,AT1G49570,AT1G50060,AT1G50110,AT1G54970,AT1G58170,AT1G59790,AT1G59940,AT1G61800,AT1G62380,AT1G62450,AT1G62770,AT1G64460,AT1G64470,AT1G69230,AT1G70430,AT1G71140,AT1G72290,AT1G73830,AT1G76470,AT1G76500,AT1G76870,AT1G77380,AT1G79470,AT1G80160,AT2G05910,AT2G14920,AT2G15320,AT2G15670,AT2G16060,AT2G17880,AT2G18270,AT2G18690,AT2G19590,AT2G20520,AT2G21910,AT2G22880,AT2G23830,AT2G25940,AT2G26070,AT2G26290,AT2G26740,AT2G29460,AT2G32750,AT2G34610,AT2G34650,AT2G36890,AT2G39400,AT2G39980,AT2G40670,AT2G41230,AT2G41280,AT2G41850,AT2G42850,AT2G44080,AT2G44570,AT2G46750,AT2G46760,AT2G46990,AT2G47270,AT2G47460,AT2G47550,AT3G01670,AT3G01970,AT3G03580,AT3G07490,AT3G08860,AT3G10120,AT3G10710,AT3G11690,AT3G14850,AT3G15370,AT3G15400,AT3G15800,AT3G16980,AT3G17680,AT3G19200,AT3G21510,AT3G23150,AT3G23240,AT3G25160,AT3G25730,AT3G28310,AT3G42700,AT3G44030,AT3G44260,AT3G45280,AT3G49380,AT3G49960,AT3G51400,AT3G51410,AT3G51600,AT3G53200,AT3G53540,AT3G54040,AT3G55250,AT3G56590,AT3G59220,AT3G59900,AT3G60290,AT3G60520,AT3G60550,AT3G61440,AT3G61950,AT3G62090,AT4G00670,AT4G01870,AT4G03140,AT4G05210,AT4G07960,AT4G08710,AT4G10120,AT4G11000,AT4G12410,AT4G12470,AT4G12480,AT4G13390,AT4G15550,AT4G15680,AT4G16260,AT4G17200,AT4G19380,AT4G19680,AT4G22940,AT4G23700,AT4G24250,AT4G24480,AT4G26220,AT4G26880,AT4G27900,AT4G30420,AT4G31610,AT4G35120,AT4G35150,AT4G35190,AT4G37580,AT4G37740,AT4G37800,AT5G01180,AT5G01210,AT5G01560,AT5G01740,AT5G02540,AT5G02760,AT5G03310,AT5G03670,AT5G03730,AT5G03740,AT5G05880,AT5G06570,AT5G07810,AT5G09970,AT5G10530,AT5G12160,AT5G12170,AT5G12220,AT5G14780,AT5G14920,AT5G15210,AT5G15720,AT5G17780,AT5G18470,AT5G18670,AT5G19890,AT5G20820,AT5G25190,AT5G25260,AT5G25350,AT5G25890,AT5G27510,AT5G28800,AT5G33340,AT5G34940,AT5G37080,AT5G38930,AT5G39610,AT5G40590,AT5G44210,AT5G44260,AT5G44580,AT5G44990,AT5G46330,AT5G47220,AT5G47740,AT5G49070,AT5G49170,AT5G49690,AT5G49700,AT5G51670,AT5G53660,AT5G53980,AT5G54490,AT5G55080,AT5G55620,AT5G57520,AT5G57530,AT5G57540,AT5G57760,AT5G59540,AT5G60030,AT5G63660,AT5G64120,AT5G66110,AT5G66440,AT5G67020,AT5G67060,AT1G01520,AT1G04600,AT1G05230,AT1G05650,AT1G08990,AT1G09180,AT1G12330,AT1G12880,AT1G13970,AT1G14120,AT1G14290,AT1G14700,AT1G15210,AT1G16060,AT1G16150,AT1G17060,AT1G17090,AT1G17190,AT1G18140,AT1G18740,AT1G18870,AT1G19250,AT1G20030,AT1G22330,AT1G22370,AT1G22550,AT1G23340,AT1G25450,AT1G26770,AT1G28130,AT1G28570,AT1G29430,AT1G29660,AT1G31320,AT1G32560,AT1G33470,AT1G34040,AT1G42470,AT1G43330,AT1G43580,AT1G48100,AT1G48480,AT1G52290,AT1G52830,AT1G54120,AT1G55240,AT1G55430,AT1G56320,AT1G60210,AT1G62610,AT1G64380,AT1G64590,AT1G64780,AT1G66800,AT1G68850,AT1G69570,AT1G69610,AT1G70270,AT1G70370,AT1G70900,AT1G72100,AT1G72140,AT1G72230,AT1G72490,AT1G72510,AT1G73070,AT1G73220,AT1G73340,AT1G73620,AT1G74450,AT1G74460,AT1G74500,AT1G75900,AT1G76420,AT1G76640,AT1G78170,AT1G78260,AT1G78840,AT1G79270,AT1G79720,AT2G01580,AT2G02410,AT2G03090,AT2G04570,AT2G06470,AT2G07000,AT2G15370,AT2G15790,AT2G16280,AT2G16630,AT2G16760,AT2G17300,AT2G18210,AT2G18800,AT2G19150,AT2G19780,AT2G20340,AT2G20750,AT2G21210,AT2G21880,AT2G22330,AT2G22510,AT2G22770,AT2G22930,AT2G23540,AT2G23970,AT2G25150,AT2G25200,AT2G25890,AT2G26360,AT2G26910,AT2G28410,AT2G28850,AT2G28950,AT2G29750,AT2G29920,AT2G30790,AT2G30930,AT2G32510,AT2G32690,AT2G33050,AT2G34070,AT2G35060,AT2G35300,AT2G35770,AT2G37380,AT2G37710,AT2G38640,AT2G38750,AT2G38760,AT2G38790,AT2G39510,AT2G40170,AT2G40370,AT2G40610,AT2G41660,AT2G42900,AT2G43670,AT2G43730,AT2G44230,AT2G46150,AT2G46340,AT2G46350,AT2G48040,AT2G48050,AT2G48130,AT2G48140,AT3G01260,AT3G02610,AT3G03240,AT3G03830,AT3G03840,AT3G04290,AT3G05370,AT3G06390,AT3G11430,AT3G12110,AT3G13980,AT3G14060,AT3G15540,AT3G15760,AT3G16800,AT3G17520,AT3G18170,AT3G19310,AT3G19320,AT3G19553,AT3G19580,AT3G20130,AT3G20370,AT3G20420,AT3G20470,AT3G22740,AT3G22830,AT3G22930,AT3G23470,AT3G23510,AT3G25640,AT3G26700,AT3G26800,AT3G26880,AT3G28130,AT3G29030,AT3G29250,AT3G30450,AT3G31415,AT3G32040,AT3G43720,AT3G44500,AT3G44540,AT3G44550,AT3G45530,AT3G46130,AT3G46700,AT3G47620,AT3G48350,AT3G48940,AT3G49840,AT3G50130,AT3G50140,AT3G50400,AT3G50640,AT3G50660,AT3G51660,AT3G51860,AT3G51970,AT3G52070,AT3G52840,AT3G53040,AT3G55090,AT3G55940,AT3G56000,AT3G56370,AT3G56710,AT3G58710,AT3G59010,AT3G59340,AT3G59370,AT3G62320,AT4G00360,AT4G00430,AT4G01140,AT4G01430,AT4G01950,AT4G02130,AT4G02410,AT4G04730,AT4G04840,AT4G05100,AT4G09480,AT4G09500,AT4G10150,AT4G10500,AT4G10910,AT4G11030,AT4G11210,AT4G11310,AT4G11820,AT4G14380,AT4G14500,AT4G15290,AT4G15500,AT4G15620,AT4G15630,AT4G15920,AT4G16640,AT4G16750,AT4G17280,AT4G17460,AT4G17470,AT4G18280,AT4G18890,AT4G19030,AT4G20390,AT4G21020,AT4G21440,AT4G21730,AT4G21850,AT4G21910,AT4G21940,AT4G22110,AT4G22610,AT4G23590,AT4G23870,AT4G24130,AT4G24180,AT4G24780,AT4G25250,AT4G25780,AT4G25960,AT4G26320,AT4G29340,AT4G31730,AT4G33790,AT4G34760,AT4G35690,AT4G36060,AT4G36610,AT4G36900,AT4G37050,AT4G37070,AT4G37400,AT4G37410,AT4G37430,AT4G38840,AT4G39510,AT5G01220,AT5G01300,AT5G01700,AT5G02170,AT5G02410,AT5G02640,AT5G03120,AT5G04120,AT5G04370,AT5G04950,AT5G06190,AT5G06760,AT5G06800,AT5G08330,AT5G08640,AT5G09520,AT5G09530,AT5G09640,AT5G10230,AT5G12420,AT5G13580,AT5G13900,AT5G13930,AT5G14130,AT5G14700,AT5G15780,AT5G15830,AT5G15960,AT5G16590,AT5G16770,AT5G17490,AT5G18060,AT5G18860,AT5G19970,AT5G22850,AT5G22860,AT5G23190,AT5G23730,AT5G23750,AT5G24100,AT5G24130,AT5G24870,AT5G25140,AT5G26270,AT5G35940,AT5G36870,AT5G37300,AT5G37970,AT5G37980,AT5G38000,AT5G39860,AT5G39930,AT5G40630,AT5G40990,AT5G41040,AT5G41080,AT5G41900,AT5G42580,AT5G42590,AT5G42600,AT5G43150,AT5G44420,AT5G44680,AT5G45340,AT5G45670,AT5G47000,AT5G47470,AT5G47500,AT5G47950,AT5G47980,AT5G47990,AT5G48000,AT5G48010,AT5G48490,AT5G49280,AT5G49360,AT5G50540,AT5G52120,AT5G52320,AT5G53250,AT5G54030,AT5G54300,AT5G54740,AT5G55250,AT5G55830,AT5G56620,AT5G59220,AT5G59350,AT5G60890,AT5G61290,AT5G62490,AT5G62900,AT5G63450,AT5G63970,AT5G64850,AT5G65990,AT5G66590,AT5G66780 SCHMID_COL_UP Induced genes in the overlap between top 500 genes ranked by change between day 0 and 7 in Col (Table S4 PubmedID:14573523) AT1G53160,AT1G69120,AT2G33810,AT5G44630,AT5G60910,AT4G14130,AT5G37300,AT3G54340,AT3G28500,AT4G19430,AT3G15270,AT5G44620,AT5G20240,AT5G47600,AT3G02310,AT5G61850,AT5G24860,AT4G31910,AT5G15800,AT3G20100,AT1G02190,AT5G65730,AT1G69180,AT2G45660,AT4G00870,AT2G03710,AT4G24150,AT4G34400,AT1G54020,AT3G14990,AT2G17280,AT5G15150,AT4G39480,AT1G03170,AT5G09300,AT1G35290,AT3G30775,AT1G24260,AT5G59220,AT1G01140,AT1G69600,AT2G01520,AT3G06160,AT1G26960,AT3G26590,AT4G25830,AT5G37260,AT4G14695,AT4G31610,AT1G72260,AT4G15480,AT5G35670,AT3G57920,AT3G02170,AT5G62165,AT2G31980,AT1G26310,AT1G01720,AT1G03710,AT2G16210,AT3G53310,AT4G23680,AT1G08630,AT4G18960,AT5G56300,AT1G69870,AT5G10300,AT2G43520,AT1G75170,AT5G22430,AT5G24780,AT5G15580,AT4G21590,AT5G37540,AT1G17745,AT2G34810,AT1G30950,AT2G42800,AT2G19800,AT1G55850,AT2G40100,AT2G35820,AT5G24910,AT1G01120,AT3G19180,AT1G07260,AT5G08640,AT1G22160,AT3G16150,AT3G12460,AT3G58770,AT2G03550,AT3G06220,AT2G20870,AT4G07670,AT5G64990,AT4G11310,AT5G43270,AT4G33790,AT2G39330,AT4G16690 SCHMID_COL_DN Repressed genes in the overlap between top 500 genes ranked by change between day 0 and 7 in Col (Table S4 PubmedID:14573523) AT3G19710,AT5G23010,AT1G49320,AT3G45160,AT3G58990,AT1G56300,AT3G25190,AT4G12030,AT5G59330,AT3G22740,AT5G07690,AT2G43100,AT4G13770,AT5G64110,AT1G11080,AT1G65860,AT3G23430,AT3G09260,AT3G03190,AT5G09220,AT4G01430,AT1G44800,AT1G62560,AT1G76800,AT3G49620,AT1G49470,AT2G14580,AT2G28780,AT1G47400,AT1G62800,AT1G74090,AT1G16410,AT5G60780,AT3G01500,AT5G61660,AT1G07610,AT3G05730,AT5G62150,AT4G08290,AT2G18570,AT5G43180,AT1G01070,AT3G54420,AT3G25760,AT5G05960,AT1G80830,AT1G59740,AT1G18880,AT4G37970,AT1G02400,AT1G47485,AT3G56240,AT1G80760,AT3G46130,AT2G37460,AT4G08300,AT3G05640,AT1G21140,AT1G01470,AT5G14740,AT1G13930,AT4G34950,AT5G43580,AT1G33440,AT5G49630,AT4G01720,AT5G38320,AT1G20070,AT2G42540,AT5G40780,AT2G34700,AT3G06490,AT1G73600,AT2G18300,AT5G05250,AT3G26960,AT4G39940,AT4G31330,AT2G38940,AT2G47180,AT1G06120,AT1G49310,AT1G18590,AT2G02010,AT2G30080,AT5G61420,AT5G50200,AT2G13360,AT5G07460,AT2G37180,AT2G32860,AT3G13790,AT3G14560,AT2G46650,AT5G04950,AT4G30140,AT2G39310,AT2G40900,AT5G38930,AT4G00880,AT5G14940,AT1G70410,AT2G46690,AT3G11280,AT3G16460,AT3G22231,AT1G56430,AT5G10180,AT4G32650,AT2G38600,AT2G46790,AT3G10120,AT5G05790,AT1G05300,AT2G33830,AT2G30540,AT1G20850,AT4G30650,AT1G67870,AT1G29660,AT1G24575,AT1G19960,AT5G20820,AT3G30340,AT3G26770,AT3G15840,AT5G26340,AT3G61380,AT1G06830,AT1G71030,AT5G59780,AT5G44480,AT1G62290,AT4G25100,AT3G57260,AT1G37130,AT4G10500,AT4G17090,AT4G04830,AT5G63850,AT4G23010,AT1G28710,AT1G29280,AT5G50120,AT3G47510,AT3G60520,AT5G10030,AT3G30530,AT2G39350,AT5G20960,AT4G09890,AT5G53320,AT4G18280,AT3G29590,AT4G26150,AT5G01870,AT4G00780,AT1G73630,AT1G73260,AT1G31180,AT4G33550,AT3G63160,AT2G23840,AT1G35190,AT4G22950,AT4G20460,AT4G14040,AT2G31790,AT3G27200,AT2G38530,AT4G19810,AT2G14750,AT3G01840,AT5G65210,AT3G52720,AT3G19270,AT5G17220,AT4G31730,AT2G30670,AT1G61660,AT1G15960,AT4G04610,AT5G19875,AT2G38870,AT2G39850,AT2G24762,AT5G54060,AT1G44100,AT3G11660,AT1G20440,AT1G70810,AT5G38780,AT5G24660,AT3G08040,AT4G19840,AT3G53100,AT5G38710,AT1G09155,AT5G44400,AT3G61880,AT3G62740,AT1G69530,AT2G43010,AT1G23800,AT1G65500,AT3G43430,AT5G27350,AT4G18640,AT5G42650,AT2G28550,AT5G57350,AT1G03495,AT3G62040,AT1G14700,AT2G29670,AT3G29030,AT1G62570,AT3G12890,AT1G68150,AT1G67865,AT1G04040,AT3G01350,AT4G39770,AT3G21270,AT3G20370,AT1G29395,AT5G22270,AT4G27830,AT5G63180,AT2G14610,AT2G21890 SCHMID_LFY-DEPENDENT_ACT Activated-newly identified genes that are activated in a LFY-dependent manner (Table 2 PubmedID:14573523) AT2G01520,AT3G04960,AT4G21590,AT4G27460,AT4G31910,AT4G33790,AT5G15150,AT5G52390,AT5G57720,AT5G24910 BERGMANN_YDA_UP Up regulated in yda (Table S3 (A) PubmedID:15178800) AT1G04110,AT1G10060,AT1G10340,AT1G10585,AT1G12845,AT1G22400,AT1G22690,AT1G23850,AT1G24260,AT1G26530,AT1G33055,AT1G33811,AT1G44760,AT1G50060,AT1G51620,AT1G51780,AT1G51790,AT1G51800,AT1G51850,AT1G57560,AT1G59730,AT1G65400,AT1G70810,AT2G02990,AT2G04460,AT2G04570,AT2G16630,AT2G18720,AT2G19990,AT2G20875,AT2G21140,AT2G23170,AT2G23620,AT2G27660,AT2G29440,AT2G34700,AT2G36690,AT2G38240,AT2G39200,AT2G39330,AT2G39690,AT2G42360,AT2G43520,AT2G46070,AT2G46720,AT2G47240,AT2G47520,AT3G02550,AT3G05730,AT3G09940,AT3G16530,AT3G16660,AT3G16670,AT3G19430,AT3G23290,AT3G23840,AT3G24140,AT3G27220,AT3G42570,AT3G44860,AT3G46280,AT3G47480,AT3G47540,AT3G50010,AT3G51450,AT3G52870,AT3G55500,AT3G57760,AT3G62820,AT4G01700,AT4G02170,AT4G03010,AT4G05110,AT4G08390,AT4G13390,AT4G14480,AT4G15210,AT4G17970,AT4G21850,AT4G23200,AT4G23210,AT4G23220,AT4G25820,AT4G26010,AT4G34210,AT4G36670,AT4G38420,AT4G38560,AT5G01870,AT5G05600,AT5G15120,AT5G18430,AT5G19580,AT5G20180,AT5G25450,AT5G25840,AT5G36220,AT5G37600,AT5G44130,AT5G44810,AT5G44820,AT5G46330,AT5G53870,AT5G54970,AT5G57530,AT5G58390,AT5G60630,AT5G64060,AT5G67400 BERGMANN_YDA_DN Down regulated in yda (Table S4 (A) PubmedID:15178800) AT1G08230,AT1G08630,AT1G60740,AT1G69720,AT1G78670,AT2G18050,AT2G22980,AT2G29290,AT2G42600,AT5G05860,AT5G06730,AT5G12030,AT5G16980,AT5G54290,AT1G09500,AT1G30760,AT2G02120,AT3G56350,AT5G20110,AT4G34970,AT2G30750,AT2G46950,AT3G44970,AT4G21020,AT1G23020,AT1G33960,AT1G47980,AT1G48130,AT1G64660,AT2G05540,AT2G15010,AT3G07040,AT4G12310,AT4G16920,AT5G11250,AT5G42800,AT3G57520,AT5G13170,AT1G15550,AT1G29430,AT1G29510,AT1G74670,AT5G25190,AT5G41700,AT1G18460,AT4G10020,AT1G02220,AT1G03790,AT1G21920,AT1G63700,AT1G66140,AT1G76410,AT1G79700,AT2G01940,AT2G17880,AT2G25790,AT2G25900,AT2G41820,AT2G43000,AT3G17770,AT3G18290,AT3G58120,AT4G13480,AT4G38470,AT5G03150,AT5G04150,AT5G10120,AT5G15310,AT4G25140,AT4G26740,AT4G27140,AT4G27150,AT4G27160,AT4G28520,AT5G54740,AT2G40460,AT5G63850,AT1G16730,AT1G17700,AT1G18810,AT1G31580,AT1G47400,AT1G52870,AT1G75830,AT1G76110,AT1G76590,AT2G21820,AT2G27380,AT2G28305,AT2G35260,AT2G36490,AT2G47270,AT3G20340,AT3G56980,AT3G59930,AT3G61060,AT4G04330,AT4G19160,AT5G02020,AT5G11420,AT5G12900,AT5G53450,AT2G38210,AT3G16220,AT4G35190,AT1G61810,AT1G69530,AT2G15480,AT2G15490,AT3G60140,AT4G27820 BERGMANN_N-YDA_UP Up regulated in ?N-YDA (Table S4 (A) PubmedID:15178800) AT1G08230,AT1G08630,AT1G60740,AT1G69720,AT1G78670,AT2G18050,AT2G22980,AT2G29290,AT2G42600,AT5G05860,AT5G06730,AT5G12030,AT5G16980,AT5G54290,AT1G09500,AT1G30760,AT2G02120,AT3G56350,AT5G20110,AT4G34970,AT2G30750,AT2G46950,AT3G44970,AT4G21020,AT1G23020,AT1G33960,AT1G47980,AT1G48130,AT1G64660,AT2G05540,AT2G15010,AT3G07040,AT4G12310,AT4G16920,AT5G11250,AT5G42800,AT3G57520,AT5G13170,AT1G15550,AT1G29430,AT1G29510,AT1G74670,AT5G25190,AT5G41700,AT1G18460,AT4G10020,AT1G02220,AT1G03790,AT1G21920,AT1G63700,AT1G66140,AT1G76410,AT1G79700,AT2G01940,AT2G17880,AT2G25790,AT2G25900,AT2G41820,AT2G43000,AT3G17770,AT3G18290,AT3G58120,AT4G13480,AT4G38470,AT5G03150,AT5G04150,AT5G10120,AT5G15310,AT4G25140,AT4G26740,AT4G27140,AT4G27150,AT4G27160,AT4G28520,AT5G54740,AT2G40460,AT5G63850,AT1G16730,AT1G17700,AT1G18810,AT1G31580,AT1G47400,AT1G52870,AT1G75830,AT1G76110,AT1G76590,AT2G21820,AT2G27380,AT2G28305,AT2G35260,AT2G36490,AT2G47270,AT3G20340,AT3G56980,AT3G59930,AT3G61060,AT4G04330,AT4G19160,AT5G02020,AT5G11420,AT5G12900,AT5G53450,AT2G38210,AT3G16220,AT4G35190,AT1G61810,AT1G69530,AT2G15480,AT2G15490,AT3G60140,AT4G27820 BERGMANN_N-YDA_DN Down regulated in ?N-YDA (Table S3 (A) PubmedID:15178800) AT1G04110,AT1G10060,AT1G10340,AT1G10585,AT1G12845,AT1G22400,AT1G22690,AT1G23850,AT1G24260,AT1G26530,AT1G33055,AT1G33811,AT1G44760,AT1G50060,AT1G51620,AT1G51780,AT1G51790,AT1G51800,AT1G51850,AT1G57560,AT1G59730,AT1G65400,AT1G70810,AT2G02990,AT2G04460,AT2G04570,AT2G16630,AT2G18720,AT2G19990,AT2G20875,AT2G21140,AT2G23170,AT2G23620,AT2G27660,AT2G29440,AT2G34700,AT2G36690,AT2G38240,AT2G39200,AT2G39330,AT2G39690,AT2G42360,AT2G43520,AT2G46070,AT2G46720,AT2G47240,AT2G47520,AT3G02550,AT3G05730,AT3G09940,AT3G16530,AT3G16660,AT3G16670,AT3G19430,AT3G23290,AT3G23840,AT3G24140,AT3G27220,AT3G42570,AT3G44860,AT3G46280,AT3G47480,AT3G47540,AT3G50010,AT3G51450,AT3G52870,AT3G55500,AT3G57760,AT3G62820,AT4G01700,AT4G02170,AT4G03010,AT4G05110,AT4G08390,AT4G13390,AT4G14480,AT4G15210,AT4G17970,AT4G21850,AT4G23200,AT4G23210,AT4G23220,AT4G25820,AT4G26010,AT4G34210,AT4G36670,AT4G38420,AT4G38560,AT5G01870,AT5G05600,AT5G15120,AT5G18430,AT5G19580,AT5G20180,AT5G25450,AT5G25840,AT5G36220,AT5G37600,AT5G44130,AT5G44810,AT5G44820,AT5G46330,AT5G53870,AT5G54970,AT5G57530,AT5G58390,AT5G60630,AT5G64060,AT5G67400 NEMHAUSER_BL_IAA-AUXIN-TREATMENT_UP Up-regulated by Fold-change of BL following exposure to BL or IAA (auxin) treatment (Table 1 PubmedID:15328536) AT4G36110,AT4G25810,AT2G18010,AT1G29490,AT4G38400,AT4G38850,AT1G35140,AT3G55840,AT3G45970,AT3G50560,AT4G30290,AT1G52830,AT5G57560,AT5G25190,AT5G64770,AT4G01950,AT4G08950,AT1G10550,AT2G26710,AT3G03840,AT1G62440,AT3G45960,AT2G19800,AT4G37450,AT1G65310,AT3G23730,AT4G35320,AT5G40380,AT5G45670,AT5G41080,AT1G29440,AT5G50570,AT3G14370,AT4G31800,AT3G25900,AT5G64780,AT1G64640,AT1G18400,AT2G01300,AT2G36220,AT2G43290,AT4G28780,AT5G44680,AT1G26960,AT2G19620,AT2G34930,AT3G28340,AT1G29500,AT1G44350,AT4G16515,AT1G61260,AT5G24570,AT5G67080,AT4G38860,AT2G33570,AT4G30280,AT5G03120,AT1G29450,AT1G29430,AT2G47060,AT3G03830,AT3G07010,AT1G29670,AT3G04210,AT1G11545,AT1G29460,AT4G31000,AT2G47440,AT5G65390,AT4G19420,AT1G64670,AT4G09890,AT1G78970,AT5G44670,AT3G57780,AT5G24580,AT2G41640,AT5G51550,AT4G27720,AT4G24570,AT2G44500,AT5G37770,AT3G29030,AT2G14900,AT3G62720,AT4G37240,AT3G05800,AT3G28270,AT1G80280,AT1G76160,AT5G48450,AT1G59500,AT5G66920,AT2G24300,AT3G54000,AT4G19120,AT3G09780,AT1G57560,AT5G61570,AT1G72790,AT5G25240,AT3G50570,AT5G10430,AT3G06770,AT1G65490,AT4G18970,AT1G30690,AT1G32920,AT3G54810,AT1G29660,AT1G01120,AT1G04610,AT4G23070,AT2G35880,AT2G44740,AT5G65610,AT4G03070,AT2G27690,AT5G47550,AT4G00950,AT5G01015,AT1G11410,AT3G30775,AT5G15290,AT5G07110,AT1G75240,AT2G21220,AT2G44230,AT4G09460,AT3G22060,AT3G05320,AT1G19380,AT1G16370,AT3G28200,AT2G30930,AT2G16280,AT5G09870,AT4G32350,AT1G66160,AT5G11160,AT5G20270,AT1G52290,AT1G17620,AT1G16390,AT3G59350,AT5G54380,AT5G61440,AT1G54120,AT2G34300,AT3G49220,AT3G56000,AT5G06720,AT3G05490,AT4G39840,AT4G00360,AT2G17230,AT4G38840,AT2G19460,AT5G41900,AT2G42850,AT2G41820,AT3G58790,AT3G07470,AT5G50335,AT1G07720,AT3G43720,AT3G50650,AT4G15290,AT5G61520,AT3G29410,AT4G13340,AT4G03400,AT5G47540,AT5G44050,AT2G41090,AT5G43760,AT4G24510,AT5G20110,AT3G07000,AT5G02890,AT3G12110,AT1G21910,AT1G10740,AT4G26690,AT5G16590,AT3G50140,AT1G01130,AT3G57450,AT2G34770,AT5G23860,AT5G19240,AT2G19780,AT2G21200,AT1G04430,AT5G11740,AT3G18200,AT1G75080,AT1G04240,AT1G64330,AT1G06350,AT2G34510,AT5G02020,AT2G32560,AT4G14680,AT2G41940,AT5G62220,AT4G34770,AT5G40890,AT4G30340,AT3G54510,AT2G37380,AT1G12460,AT1G22530,AT1G52250,AT1G61170,AT1G35180,AT1G61350,AT5G15350,AT3G05150,AT1G03870,AT1G21820,AT5G63810,AT5G26734,AT1G61890,AT1G58340,AT2G25200,AT3G22540,AT4G12730,AT1G54740,AT3G02070,AT4G03140,AT5G11070,AT1G05575,AT4G27970,AT3G16700,AT3G05900,AT3G50890,AT3G48720,AT3G12610,AT5G52120,AT4G26260,AT2G32100,AT3G06450,AT5G60270,AT1G56720,AT1G24170,AT5G14730,AT5G22940,AT2G38480,AT1G61667,AT3G06990,AT1G04680,AT2G23130,AT5G14340,AT2G35860,AT3G02170,AT1G68410,AT1G59710,AT5G62730,AT1G03457,AT5G63180,AT3G11700,AT1G64380,AT3G12580,AT2G38610,AT5G04190,AT4G11280,AT1G66350,AT2G32540,AT3G23750,AT1G04040,AT5G46590,AT1G17060,AT1G78240,AT1G27210,AT3G28910,AT2G02170,AT1G21830,AT3G50240,AT1G73830,AT5G14750,AT3G45230,AT5G59000,AT1G12500,AT4G23290,AT1G45688,AT5G56750,AT1G69490,AT1G05810,AT2G14890,AT3G53620,AT1G67470,AT2G04240,AT4G28270,AT1G03590,AT4G25260,AT3G61550,AT3G23820,AT5G64740,AT2G31730,AT5G13400,AT1G50890,AT2G41540,AT4G16563,AT4G15800,AT5G06700,AT5G25170,AT2G02860,AT1G69890,AT1G02860,AT2G41880,AT5G03520,AT4G21850,AT4G20780,AT5G01710,AT1G07650,AT5G17640,AT1G64980,AT5G56170,AT1G76690,AT5G57800,AT1G05000,AT1G33240,AT5G63410,AT4G30996,AT5G51190,AT5G65810,AT5G11000,AT5G22920,AT4G23180,AT2G01190,AT5G03040,AT1G53730,AT2G21540,AT4G02130,AT4G30440,AT3G54690,AT2G37940,AT3G47570,AT5G44060,AT1G01540,AT3G58120 NEMHAUSER_BL_IAA-AUXIN-TREATMENT_DN Down-regulated by Fold-change of BL following exposure to BL or IAA (auxin) treatment (Table 2 PubmedID:15328536) AT5G57785,AT5G01740,AT3G30180,AT4G36780,AT3G50660,AT4G01680,AT2G37030,AT5G22580,AT1G32190,AT5G57780,AT5G05690,AT4G01870,AT5G38930,AT3G13980,AT4G22200,AT1G72180,AT3G04320,AT1G36940,AT3G23550,AT1G80130,AT5G12050,AT1G06570,AT4G27260,AT5G35940,AT4G17460,AT3G55130,AT2G45050,AT5G24210,AT1G63050,AT1G28130,AT1G69160,AT1G72900,AT3G57010,AT4G39800,AT5G05880,AT1G75500,AT2G30070,AT5G66590,AT1G74500,AT1G52190,AT2G43100,AT1G32900,AT5G23010,AT1G71030,AT3G61460,AT1G76240,AT1G08230,AT3G47800,AT1G21050,AT1G66890,AT5G63790,AT5G49100,AT5G54510,AT5G13740,AT2G05790,AT3G62280,AT4G37560,AT3G58990,AT5G02540,AT5G22500,AT1G80840,AT4G18510,AT3G55120,AT5G65310,AT4G25780,AT3G13730,AT4G13770,AT1G69870,AT4G39400,AT2G46600,AT3G16500,AT3G44610,AT5G23220,AT5G10290,AT5G36910,AT2G34490,AT4G08040,AT1G54890,AT3G49160,AT5G64260,AT1G11350,AT5G27670,AT1G19050,AT5G53980,AT3G19380,AT1G18590,AT2G41380,AT4G31820,AT3G04010,AT3G27950,AT1G06180,AT1G54200,AT4G32980,AT5G56980,AT1G20160,AT3G12920,AT5G66080,AT3G11110,AT4G39940,AT3G23170,AT2G03760,AT3G08770,AT4G36380,AT5G41600,AT5G17700,AT1G07090,AT1G23080,AT1G17180,AT3G50070,AT2G30390,AT5G10510,AT1G14700,AT1G21250,AT1G76500,AT3G04070,AT3G57880,AT2G39450,AT1G77690,AT2G15620,AT4G22470,AT4G00080,AT3G16570,AT4G08770,AT2G29390,AT3G51290,AT4G32870,AT1G68190,AT5G24070,AT2G25980,AT4G37980,AT1G63720,AT1G72940,AT5G06860,AT1G73620,AT2G41250,AT1G27730,AT2G33710,AT5G08565,AT4G27410,AT1G35350,AT2G38940,AT5G60850,AT3G15095,AT4G30270,AT1G49030,AT1G70940,AT5G46330,AT2G25450,AT3G55960,AT4G34610,AT3G14560,AT4G32290,AT4G37550,AT2G42950,AT2G43920,AT4G29070,AT3G23080,AT1G28440,AT3G17610,AT1G59960,AT1G50060,AT3G45780,AT5G51830,AT4G33700,AT1G28960,AT5G07010,AT2G20570,AT2G46930,AT3G60690,AT4G16370,AT5G62900,AT3G47560,AT1G74090,AT4G39950,AT3G15240,AT2G46740,AT1G28530,AT1G21460,AT4G02850,AT1G14580,AT1G56680,AT3G60390,AT4G37540,AT5G54390,AT1G16750,AT3G48970,AT2G29980,AT3G15680,AT2G43060,AT5G53450,AT3G23290,AT1G59940,AT2G45210,AT1G46264,AT3G50750,AT5G37020,AT2G46660,AT3G52540,AT2G32010,AT1G75460,AT4G30080,AT2G39210,AT5G15740,AT3G23050,AT1G21410,AT1G78370,AT1G53510,AT3G08640,AT3G20830,AT1G23205,AT1G77760,AT3G17860,AT2G15490,AT3G51450,AT1G64900,AT5G60760,AT5G45820,AT2G46225,AT4G12390,AT1G80050,AT1G69410,AT1G06000,AT4G26530,AT2G20515,AT5G13180,AT1G67030,AT3G18080,AT3G48690,AT4G18130,AT2G26740,AT1G24100,AT1G72680,AT5G20950,AT1G14820,AT3G13510,AT1G68560,AT5G62430,AT5G43870,AT5G47380,AT1G62810,AT5G04590,AT1G07420,AT4G33670,AT3G10520,AT3G62760,AT1G22040,AT4G24790,AT1G67110,AT1G70300,AT5G62920,AT5G42650,AT4G28240,AT1G30410,AT3G05500,AT1G52100,AT5G09440,AT5G42990,AT4G15550,AT4G11820,AT5G44400,AT5G02260,AT3G23640,AT2G03750,AT5G55120,AT5G19440,AT3G12870,AT3G29575,AT2G02070,AT2G36970,AT2G01420,AT1G73480,AT5G59400,AT3G48610,AT3G62550,AT2G36910,AT1G65730,AT3G29200,AT1G21760,AT1G04110,AT1G48750,AT3G44450,AT4G34860,AT5G17860,AT4G02800,AT1G30530,AT1G70530,AT3G52870,AT2G04160,AT1G79630,AT4G37310,AT1G13560,AT5G60890,AT1G75580,AT4G04610,AT5G22270,AT1G60960 NEMHAUSER_IAA-AUXIN-TREATMEN_UP Up-regulated genes by IAA (Table 5 PubmedID:15328536) AT2G23170,AT4G32280,AT1G29490,AT1G59500,AT4G14560,AT1G29500,AT1G29440,AT4G38850,AT1G29430,AT4G16515,AT3G15540,AT5G02760,AT2G37030,AT4G30290,AT5G18060,AT3G03840,AT5G47370,AT3G50340,AT2G40610,AT1G15580,AT5G52900,AT1G29460,AT1G29510,AT4G36110,AT5G54510,AT4G08040,AT5G64770,AT2G18010,AT3G23030,AT5G62280,AT3G03830,AT3G42800,AT2G39370,AT4G27260,AT5G15160,AT4G34770,AT1G04240,AT2G45420,AT3G62100,AT2G14960,AT3G58190,AT5G54490,AT5G41400,AT3G25900,AT4G09890,AT3G29370,AT2G26710,AT5G12050,AT4G34760,AT5G55250,AT2G32190,AT4G13195,AT1G65920,AT1G78970,AT3G07010,AT2G32210,AT2G22810,AT3G13980,AT4G27280,AT1G22810,AT5G25190,AT1G10550,AT1G70940,AT1G64640,AT1G78100,AT5G64780,AT1G18400,AT5G48900,AT5G49630,AT1G20190,AT4G38400,AT1G52830,AT4G37370,AT5G59010,AT4G17350,AT1G75500,AT2G32020,AT4G25810,AT2G42430,AT5G12940,AT4G12410,AT5G09970,AT4G01950,AT4G30280,AT4G14550,AT1G58340,AT4G31910,AT1G19020,AT2G36220,AT2G41380,AT1G21980,AT3G19380,AT2G41820,AT2G47130,AT1G67810,AT3G25710,AT5G06930,AT2G35930,AT2G33310,AT3G63440,AT1G11545,AT3G58120,AT3G49220,AT1G36940,AT4G17490,AT2G30040,AT1G09250,AT4G28640,AT5G50570,AT3G07000,AT3G26760,AT5G66080,AT5G50335,AT3G06370,AT1G65310,AT5G04190,AT1G29660,AT4G22780,AT1G75240,AT4G24570,AT3G12700,AT5G67430,AT3G55840,AT5G51810,AT1G69530,AT2G43290,AT1G69930,AT5G18930,AT1G02400,AT1G11000,AT1G62045,AT2G32560,AT4G37295,AT4G37770,AT4G38860,AT5G10695,AT4G13235,AT4G38840,AT3G50350,AT2G21200,AT2G41730,AT1G64560,AT5G06080,AT1G32690,AT1G61340,AT1G68620,AT5G13400,AT4G32460,AT1G49780,AT3G54030,AT4G17460,AT5G07110,AT2G38470,AT3G23340,AT1G69160,AT5G19530,AT2G22830,AT4G36010,AT4G22530,AT5G66400,AT3G50260,AT1G02360,AT5G27420,AT2G32030,AT2G41640,AT2G35880,AT4G12720,AT3G50900,AT1G23340,AT2G15490,AT2G22500,AT1G43910,AT2G42380,AT1G35140,AT3G02550,AT3G13380,AT4G35320,AT4G37450,AT3G26470,AT4G11280,AT3G55740,AT3G29360,AT3G03170,AT5G43700,AT3G26970,AT1G69570,AT2G18690,AT5G63810,AT2G21220,AT3G28180,AT5G25170,AT1G64390,AT1G80840,AT3G49530,AT1G64405,AT1G64980,AT2G35300,AT3G12610,AT4G28703,AT2G42440,AT5G65670,AT5G39580,AT4G22560,AT2G43590,AT1G01120,AT5G66310,AT4G18970,AT4G39670,AT3G62110,AT2G47140,AT3G45960,AT3G12670,AT4G04990,AT2G18210,AT1G60010,AT3G01490,AT1G23080,AT3G23230,AT4G28490,AT5G67060,AT5G45280,AT2G15480,AT4G39390,AT1G07135,AT5G22860,AT4G37590,AT5G66920,AT1G64670,AT5G04980,AT3G05490,AT4G36540,AT3G60260,AT5G07000,AT5G53290,AT4G13180,AT5G66210,AT2G43060,AT5G25460,AT4G25420,AT5G65610,AT5G38710,AT3G26910,AT2G23180,AT3G22140,AT1G34110,AT1G60730,AT3G23050,AT5G48540,AT5G65270,AT2G28400,AT4G37290,AT4G10150,AT4G39400,AT3G11820,AT1G59740,AT2G32580,AT5G13460,AT2G47860,AT1G72790,AT3G52400,AT4G27350,AT4G36500,AT1G18810,AT3G04910,AT2G35290,AT3G04640,AT3G28210,AT1G76240,AT5G37770,AT5G26930,AT5G45950,AT4G09570,AT5G62220,AT1G62770,AT3G61460,AT3G17090,AT3G44720,AT5G27760,AT5G06320,AT3G10720,AT5G47800,AT5G59550,AT1G13670,AT4G32350,AT1G15010,AT5G57560,AT5G11740,AT4G02410,AT1G18380,AT5G13190,AT3G08760,AT1G62300,AT1G30820,AT4G30996,AT1G69295,AT5G64250,AT1G02900,AT2G24300,AT4G19460,AT3G15210,AT3G13430,AT1G17620,AT5G54500,AT3G23450,AT2G37940,AT4G38820,AT3G26980,AT1G68880,AT2G39870,AT3G13000,AT1G68690,AT3G23090,AT2G23270,AT2G40140,AT5G50760,AT3G62630,AT5G24590,AT5G03490,AT2G45400,AT3G60390,AT2G39130,AT1G68810,AT1G76160,AT4G01110,AT1G28130,AT1G22510,AT1G70550,AT4G39990,AT3G09280,AT5G07530,AT1G34750,AT1G28370,AT1G21820,AT3G57550,AT4G12110 NEMHAUSER_IAA-AUXIN-TREATMEN_DN Down-regulated genes by IAA (Table 6 PubmedID:15328536) AT4G18510,AT1G31770,AT1G19900,AT5G35190,AT5G15180,AT1G68520,AT2G16980,AT1G15210,AT3G54590,AT5G47450,AT4G01140,AT1G74940,AT2G44130,AT5G62360,AT2G01950,AT5G06640,AT1G72510,AT5G04790,AT2G42850,AT3G63210,AT3G07660,AT2G24980,AT5G15290,AT5G60660,AT1G78090,AT3G20015,AT3G16180,AT5G65970,AT5G06630,AT3G52480,AT5G57180,AT4G08300,AT5G47610,AT3G16340,AT3G43670,AT5G14880,AT3G62680,AT5G14090,AT3G01260,AT4G08410,AT1G56230,AT1G17970,AT4G40090,AT2G07680,AT2G47160,AT3G52490,AT2G26760,AT2G38170,AT1G49470,AT1G77380,AT3G22104,AT5G03960,AT3G56230,AT2G41610,AT1G17190,AT1G25230,AT1G45904,AT3G54580,AT1G21090,AT3G54770,AT1G71970,AT3G46130,AT2G23590,AT3G27650,AT3G43800,AT2G26170,AT1G72430,AT4G33770,AT4G28850,AT1G49660,AT5G49270,AT3G21250,AT5G19800,AT4G02270,AT3G24210,AT2G43920,AT3G23430,AT3G22970 WILLIAM_LFY_UP Induced directly-14 genes are good candiDates for direct targets of LFY because they are induced directly (without protein synthesis) after LFY ctivation and are expressed at elevated levels in plants that constitutively overexpress LFY (Table 1 PubmedID:14736918) AT5G60630,AT5G49770,AT5G03790,AT3G61250,AT1G16070,AT4G14090,AT5G03230,AT4G22780,AT3G43190,AT3G52470,AT3G47340,AT1G61830,AT2G44450,AT3G19390,AT1G68880 REDMAN_IAA-3H_UP Greatest up-regulated genes by 1.0 ?m IAA at 3h (Table 5a PubmedID:15086809) AT2G23170,AT1G59500,AT2G14960,AT3G58190,AT2G34650,AT2G39370,AT3G57950,AT2G45420,AT1G64405,AT2G23060,AT4G22620,AT4G27260,AT1G30760,AT1G62770,AT2G47860,AT3G55720,AT3G49700,AT4G12410,AT4G37295,AT1G49450,AT1G17060,AT1G15580,AT3G07390,AT4G37290,AT5G54510 REDMAN_IAA-3H_DN Greatest down-regulated genes by 1.0 ?m IAA at 3h (Table 5b PubmedID:15086809) AT4G26320,AT5G46900,AT2G18800,AT4G25250,AT3G01190,AT3G59370,AT4G12510,AT4G11190,AT4G11210,AT4G19030,AT5G66815,AT1G52820,AT5G56540,AT5G47450,AT4G21830,AT1G19900,AT1G72200,AT3G01260,AT1G17190,AT2G28850,AT5G60660,AT4G30170,AT1G21110,AT5G53250,AT2G36790 SOOKYUNG_VIP5/FLC-MUTANT_UP Upregulated in the vip5 mutants relative to the flc mutant. (Table S1 PubmedID:15472079) ERF-1,AT5G26220,AT5G56240,AT4G23680,AT3G24780,AT3G05400,AT1G20390,RAV2,AT1G02190,PNP-A,BGLU28,AT5G49700,AT3G62960,AT4G35190,CK1,MRP7,AT3G16150,ORA47,JAZ7,AT5G34800,AT5G64870,PUM12,MYB24,AT5G17850,AT3G13610,OLEO4,AIG1,NAC016,GA20OX2,QQS SOOKYUNG_VIP5/FLC-MUTANT_DN Downregulated in the vip5 mutants relative to the flc mutant. (Table S1 PubmedID:15472079) ACD6,DR4,AT1G31690,NPX1,PORA,PDF1.2,AT5G38000,AT5G35480,MRU1,IMS2,FLC,NAS1,AT3G46880,AGL24,AT4G21650,AT1G13650,AT1G69480,PCC1,AT3G23470,AT3G16530,PDF1.2B,AT3G16670,PR4,AT1G13470,AT1G14580,AT1G19960,EXL6,PCR2,GASA1,MEE3,XIB,AT2G05510,JAL23,AT4G16260,CYP71B12,ANK,RABH1E,AT3G23550,HO3,ATGA2OX1 SOOKYUNG_VIP6/FLC-MUTANT_UP Upregulated in the vip6 mutants relative to the flc mutant. (Table S1 PubmedID:15472079) ERF-1,AT5G26220,AT5G56240,AT4G23680,AT3G24780,AT3G05400,AT1G20390,RAV2,AT1G02190,PNP-A,BGLU28,AT5G49700,AT3G62960,AT4G35190,CK1,MRP7,AT3G16150,ORA47,JAZ7,AT5G34800,AT5G64870,PUM12,MYB24,AT5G17850,AT3G13610,OLEO4,AIG1,NAC016,HA4,AT1G70880,AT1G43590 SOOKYUNG_VIP6/FLC-MUTANT_DN Downregulated in the vip6 mutants relative to the flc mutant. (Table S1 PubmedID:15472079) ACD6,DR4,AT1G31690,NPX1,PORA,PDF1.2,AT5G38000,AT5G35480,MRU1,IMS2,FLC,NAS1,AT3G46880,AGL24,AT4G21650,AT1G13650,AT1G69480,PCC1,AT3G23470,AT3G16530,PDF1.2B,AT3G16670,PR4,AT1G13470,AT1G14580,AT1G19960,EXL6,PCR2,GASA1,MEE3,XIB,AT2G05510,JAL23,AT4G16260,CYP71B12,ANK,RABH1E,AT3G23550,HO3,ATGA2OX1 BRENNER_CKX1-BV0/COL-0-BA0_UP Up-CKX1 BV0 vs Col-0 BA0 (Table S 7 PubmedID:16212609) AT2G41510,AT5G56080,AT4G28520,AT2G43510,AT1G02850,AT2G41230,AT3G12500,AT4G33550,AT1G33055,AT2G19310,AT5G15780,AT4G33070,AT5G61820,AT4G15550,AT1G54050,AT5G10580,AT3G18280,AT1G19610,AT4G39675,AT3G11340,AT2G27550,AT2G39980,AT4G33560,AT5G15770,AT1G17020,AT4G28040,AT4G14020,AT1G20430,AT4G31330,AT2G02850,AT5G05960,AT1G47960,AT1G48750,AT1G12845,AT2G44310,AT1G49410,AT2G17850,AT1G71870,AT1G70350,AT3G25190,AT3G17790,AT2G24260,AT1G69880,AT5G62575,AT4G33420,AT1G73260,AT3G08860,AT1G67100,AT2G47380,AT1G07430,AT2G42210,AT3G11930,AT3G03270,AT2G25210,AT2G26400,AT4G15610,AT1G18100,AT1G74500,AT1G49470,AT2G22570,AT5G61220,AT5G63600,AT3G59540,AT5G66390,AT1G05560,AT5G05370,AT2G43460,AT5G13910,AT3G06890,AT1G52720,AT2G32060,AT1G32210,AT5G45010,AT4G30460,AT4G27450,AT4G21320,AT2G28190,AT4G10810,AT4G28240,AT2G27775,AT1G16310,AT4G33040,AT2G18180,AT2G30000,AT3G15357,AT3G61490,AT3G61110,AT2G31160,AT2G44620,AT1G69526,AT3G48520,AT5G08000,AT5G36910,AT2G02760,AT2G29700,AT1G30750,AT3G02190,AT1G72850,AT1G75390,AT5G49020,AT1G80860,AT3G14060,AT3G61990,AT4G34135,AT3G05190,AT1G31820,AT5G38980,AT4G04460,AT3G11770,AT4G23690,AT4G14010,AT5G09270,AT5G04950,AT1G76060,AT3G47510,AT3G14610,AT3G03070,AT3G62580,AT2G42310,AT5G02380,AT5G07900,AT5G44920,AT3G48510,AT4G39730,AT3G55130,AT3G12260,AT2G30970,AT2G34490,AT4G38740 BRENNER_CKX1-BV0/COL-0-BA0_DN Down-CKX1 BV0 vs Col-0 BA0 (Table S 7 PubmedID:16212609) AT4G11190,AT1G21100,AT5G48000,AT2G01520,AT1G26380,AT2G26560,AT1G21110,AT4G14630,AT5G57220,AT2G25160,AT1G13460,AT5G16570,AT1G14540,AT1G36640,AT2G42980,AT5G62920,AT1G13420,AT1G49860,AT1G73330,AT5G48010,AT2G45880,AT5G48430,AT5G05860,AT5G49730,AT2G15120,AT5G15130,AT1G74360,AT4G13390,rps8,AT3G44860,AT2G46440,AT1G70850,AT2G01530,AT1G26250,AT3G54720,AT3G46270,AT1G64170,AT3G52430,AT2G39200,AT1G10340,AT1G22330,AT5G66180,AT1G09480,AT3G23070,AT5G47240,AT3G62150,AT5G16730,AT2G39150,AT3G18750,AT2G35930,AT1G51850,AT1G61560,AT2G17740,AT2G37430,AT4G28850,AT1G51800,AT1G64400,AT2G35710,AT4G37410,AT1G76270,AT1G71210,AT1G50040,AT1G21130,AT3G51350,AT2G31010,AT4G00880,AT3G59780,AT1G73310,AT1G76360,AT3G05900,AT4G08300,AT3G05270,AT1G10470,AT2G28630,AT5G28610,AT2G25735,AT5G10720,AT1G55450,AT4G15690,AT4G11330,AT3G51680,AT5G62280,AT1G70985,AT5G67530,AT3G29375,AT2G18300,AT5G46960,AT4G38400,rpl22,AT1G61100,AT5G23690,AT1G30700,rpl33,AT1G70200,AT4G15660,AT3G55840,AT3G22060,AT2G44730,AT1G52190,AT1G12120,AT5G48110,AT2G38870,AT4G16860,AT3G18390,AT1G03930,AT4G25835,AT2G15390,AT1G69040,AT5G01540,AT4G33050,AT1G22335,AT3G07360,AT5G12480,AT4G04850,AT5G50570,AT3G59040,AT5G40590,AT1G71830,AT1G73280,AT3G29400,AT3G16220,AT1G66880,ycf1.1,AT2G18690,AT3G55150,AT1G61820,rps18,AT3G43240,AT4G22710,AT1G35350,AT3G17740,AT3G55020,AT2G01930,AT1G65470,AT3G51150,AT5G45820,AT3G50560,AT1G24150,AT4G22910,AT4G08470,AT4G17540,AT3G27950,AT5G52830,AT4G01750,AT5G57960,AT3G19010,AT1G10250,AT5G12340,AT3G05640,AT2G31270,AT2G37820,AT2G29650,AT2G47240,AT1G63980,AT1G04160,AT2G02710,AT4G16845,AT3G13226,AT2G28260,AT2G03340,AT4G33190,AT3G59080,AT1G44900,AT4G23180,AT5G67030,AT2G25170,AT2G19800,AT2G30610,AT3G62930,AT3G59700,AT5G44050,AT1G08040,AT3G47450,AT2G28310,AT4G32330,AT4G03610,AT1G62300,AT3G26330,AT5G26270,AT1G57990,AT5G03650,AT4G20430,AT4G37080,AT1G03457,AT5G53050,AT5G43500,AT5G64120,AT4G23210,AT5G64840,AT2G38750,AT3G23410,AT4G18950,AT2G03480,AT5G43900,AT1G19835,AT2G33570,AT3G09050,AT3G26030,AT1G53590,AT1G70250,AT1G21820,AT5G67580,AT1G06640,AT3G09980,AT1G29700,AT2G30250,AT2G23390,AT5G37055,AT5G15730,AT3G01670,AT3G21840,AT2G24570,AT1G61360,AT1G79880,AT4G35150,AT1G30440,AT5G50915,AT4G22580,AT4G09160,AT1G51790,AT5G62630,AT1G49580,AT3G57530,AT1G30520,AT3G08720,AT2G20960,AT3G50700,AT1G11520,AT4G03390,AT5G15150,AT4G04710,AT5G03940,AT2G35060,AT4G22190,AT5G52560,AT5G45430,AT3G55520,AT1G63130,AT2G36740,AT3G03310,AT4G17230,AT4G31390,AT2G36690,AT5G43130,AT1G69370,AT4G22350,AT4G03110,AT5G66310,AT1G29550,AT2G31990,AT4G08850,AT5G44670,AT5G15020,AT4G00410,AT1G78580,AT2G43010,AT1G64860,rps3.chloroplast,AT1G74040,AT5G28290,AT4G23190,AT1G18400,AT1G58050,AT4G08150,AT2G28550,AT5G11070,AT1G51805,AT4G28250,AT1G59560,AT5G58430,AT5G22860,AT1G73460,AT2G32660,AT5G07820,AT1G18730,AT1G64150,AT5G22340,AT2G42750,AT4G17500,AT3G17040,AT4G02200,AT4G24990,AT5G63700,AT2G42600,AT4G08920,AT1G79600,AT3G22790,AT1G10050,AT5G42620,AT1G80770,AT1G16720,AT3G45780,AT3G54170,AT1G34210,AT1G32490,AT3G47340,AT1G30720,AT1G12740,AT2G40150,AT3G44990,AT1G29660,AT4G20860,AT1G54060,AT2G01480,AT5G64470,AT2G42030,AT5G10270,AT3G11820,AT3G62960,AT4G28860,AT5G56650,AT2G01830,AT1G49590,AT5G23400,AT5G11590,AT5G19530,AT1G23480,AT1G07650,AT4G33525,AT5G09860,AT4G34610,AT5G22940,AT5G64070,AT5G35970,AT3G11700,AT5G63220,AT1G17550,AT5G19030,AT5G59750,AT1G11260,AT3G62310,AT2G27900,AT3G17440,AT3G52400,AT3G26910,AT3G52450,AT2G28350,AT3G54870,AT4G27300,AT4G30630,AT5G41770 LORETI_SUCROSE_ANOXIC-SEEDLING_UP Enhanced-sucrose on the anoxic response of Arabidopsis seedlings (Table S 3 PubmedID:15734908) AT3G46230,AT2G29500,AT1G59860,AT1G54050,AT5G12020,AT4G10250,AT3G09940,AT1G53540,AT5G51440,AT4G37370,AT2G38470,AT5G27420,AT5G11110,AT5G10695,AT4G34135,AT4G21830,AT2G22240,AT2G32120,AT1G14200,AT1G20450,AT3G55980,AT5G61440,AT2G20670,AT2G28110,AT2G01930,AT5G23660,AT5G22920,AT1G75180,AT1G72820,AT3G59940,AT5G62280,AT5G64110,AT3G60140,AT5G26734,AT2G28630,AT1G61100,AT4G14500,AT5G49450,AT5G03230,AT3G19680,AT1G01430,AT1G66150,AT4G10910,AT1G76160,AT1G32170,AT4G12690,AT2G42870,AT5G04530,AT2G01850,AT2G17230,AT4G08950 LORETI_SUCROSE_ANOXIC-SEEDLING_DN Reduced-sucrose on the anoxic response of Arabidopsis seedlings (Table S 3 PubmedID:15734908) AT4G24110,AT3G43190,AT5G20830,AT5G39890,AT3G02550,AT1G43800,AT5G15120,AT4G32840,AT5G44730,AT5G17300,AT1G73480,AT2G30930,AT2G21180,AT1G72230,AT3G57450,AT3G59900,AT5G11540,AT5G41400,AT4G10150,AT4G12510,AT2G18010,AT1G29500,AT1G29430,AT4G38850,AT1G29440 BRANCO-MRNA-ABUNDANCE_SEEDLINGS_UP Significant increase-Genes with a significant increase in mRNA abundance in 7 d-old seedlings in response to 12 h stress, as measured by use of atH1 GeneChips and that also showed a significant increase in mRNA accumulation in one or more of the following systems (Table 3 PubmedID:16081496) AT5G12030,AT3G46230,AT1G17180,AT5G59820,AT4G10270,AT1G53540,AT4G33070,AT3G43190,AT2G47520,AT4G37370,AT3G02550,AT2G29500,AT5G20830,AT1G33055,AT5G66985,AT1G77120,AT2G41730,AT1G43800,AT1G76600,AT3G23170,AT4G33560,AT5G05410,AT2G46240,AT5G14730,AT5G42200,AT5G52640,AT1G14870,AT1G16030,AT3G13310,AT5G51440,AT5G17300,AT1G26270,AT3G03270,AT1G03610,AT3G11930,AT4G12400,AT4G22780,AT5G15120,AT5G19550,AT1G20270,AT5G48570,AT1G74940,AT4G17260,AT4G31020,AT5G27420,AT5G44730,AT1G33050,AT1G74500,AT3G12500,AT1G55810,AT2G15890,AT2G38470,AT3G09350,AT3G28480,AT4G17670,AT4G32840,AT4G33950,AT5G07580,AT5G47910,AT1G03220,AT1G19530,AT1G66880,AT2G36950 RAMONELL_CHITO-OCTAMER-TREATED_SEEDLING_UP Induced at Least 1.5-Fold in the Chito-octamer-Treated Seedlings (Table S 1 PubmedID:15923325) AT5G61090,AT5G58170,AT5G45090,AT5G44980,AT5G42830,AT5G36770,AT5G28090,AT5G24480,AT5G12990,AT4G36620,AT4G32630,AT4G30740,AT4G24640,AT4G22440,AT4G10240,AT4G02195,AT4G00850,AT3G63230,AT3G61230,AT3G60140,AT3G58280,AT3G51970,AT3G51710,AT3G47380,AT3G44410,AT3G42210,AT3G32260,AT3G29650,AT3G28155,AT3G13228,AT3G10580,AT3G04220,AT3G01960,AT3G01270,AT2G47260,AT2G46950,AT2G46915,AT2G45580,AT2G42410,AT2G38690,AT2G24320,AT2G15150,AT2G10500,AT2G07705,AT2G04820,AT2G01840,AT1G80590,AT1G74930,AT1G73950,AT1G69820,AT1G65500,AT1G62460,AT1G57830,AT1G43680,AT1G40230,AT1G32150,AT1G31010,AT1G28080,AT1G24330,AT1G21020,AT1G20800,AT1G19330,AT1G19320,AT1G17170,AT1G09320 RAMONELL_CHITO-OCTAMER-TREATED_SEEDLING_DN Repressed at Least 1.5-Fold in the Chito-octamer-Treated Seedlings (Table S 4 PubmedID:15923325) AT1G01290,AT1G03850,AT1G04070,AT1G05310,AT1G06180,AT1G06770,AT1G07250,AT1G07350,AT1G10470,AT1G11710,AT1G12330,AT1G12650,AT1G14680,AT1G15490,AT1G16430,AT1G17020,AT1G17430,AT1G18320,AT1G21820,AT1G22640,AT1G23100,AT1G28540,AT1G29460,AT1G30530,AT1G31040,AT1G31120,AT1G32760,AT1G33680,AT1G34520,AT1G35480,AT1G47970,AT1G49850,AT1G50300,AT1G50390,AT1G50940,AT1G51380,AT1G52060,AT1G52160,AT1G52260,AT1G52710,AT1G53030,AT1G53035,AT1G53340,AT1G54380,AT1G55930,AT1G60770,AT1G61870,AT1G64670,AT1G66660,AT1G68490,AT1G69040,AT1G70230,AT1G71080,AT1G71970,AT1G72440,AT1G72630,AT1G72830,AT1G73870,AT1G74090,AT1G75710,AT1G78960,AT1G79260,AT2G03150,AT2G14800,AT2G15830,AT2G16750,AT2G18300,AT2G20180,AT2G20670,AT2G21020,AT2G25650,AT2G26590,AT2G27330,AT2G28720,AT2G29900,AT2G29970,AT2G30530,AT2G30910,AT2G30925,AT2G34570,AT2G37080,AT2G38090,AT2G39120,AT2G39795,AT2G39850,AT2G40080,AT2G40316,AT2G41250,AT2G42570,AT2G42610,AT2G43780,AT2G43880,AT2G45830,AT2G46100,AT2G46790,AT2G47270,AT3G01400,AT3G03830,AT3G04570,AT3G05120,AT3G07030,AT3G08780,AT3G08990,AT3G09970,AT3G10530,AT3G12090,AT3G14750,AT3G15352,AT3G16170,AT3G17465,AT3G17740,AT3G18170,AT3G18870,AT3G19220,AT3G19370,AT3G19750,AT3G20015,AT3G22210,AT3G23150,AT3G26830,AT3G26932,AT3G45090,AT3G45620,AT3G45900,AT3G49100,AT3G49140,AT3G49640,AT3G49890,AT3G50440,AT3G51780,AT3G52170,AT3G53440,AT3G53630,AT3G53700,AT3G54680,AT3G54920,AT3G54980,AT3G55890,AT3G58840,AT3G60630,AT3G61950,AT3G61990,AT3G62810,AT4G00040,AT4G00090,AT4G00238,AT4G00270,AT4G00460,AT4G00670,AT4G01650,AT4G02400,AT4G02820,AT4G03070,AT4G03180,AT4G03380,AT4G08110,AT4G08700,AT4G09500,AT4G12340,AT4G12760,AT4G15030,AT4G15190,AT4G15620,AT4G16563,AT4G17960,AT4G18630,AT4G19550,AT4G21170,AT4G22350,AT4G22560,AT4G26430,AT4G31270,AT4G33700,AT4G35550,AT5G03670,AT5G04670,AT5G05160,AT5G05670,AT5G05680,AT5G05870,AT5G06300,AT5G07580,AT5G11390,AT5G12210,AT5G12260,AT5G13150,AT5G13870,AT5G14750,AT5G17640,AT5G18850,AT5G22400,AT5G23080,AT5G23460,AT5G23760,AT5G24010,AT5G24280,AT5G24340,AT5G24470,AT5G24840,AT5G24880,AT5G27670,AT5G28160,AT5G35480,AT5G36220,AT5G39550,AT5G39610,AT5G42880,AT5G43150,AT5G43820,AT5G44710,AT5G44730,AT5G45190,AT5G46960,AT5G48330,AT5G48990,AT5G49170,AT5G49330,AT5G49820,AT5G49870,AT5G51170,AT5G52550,AT5G52900,AT5G53320,AT5G53800,AT5G53870,AT5G54370,AT5G56520,AT5G57340,AT5G57900,AT5G58480,AT5G58960,AT5G60400,AT5G63660,AT5G64600,AT5G64760,AT5G65050,AT5G65640,AT5G66820 RAMONELL_CRAB-SHELL-CHITIN-TREATED_SEEDLING_UP Induced at Least 1.5-Fold in the Crab Shell Chitin Mixture-Treated Seedlings (Table S 2 PubmedID:15923325) AT5G66130,AT5G62620,AT5G58550,AT5G54260,AT5G49630,AT5G49450,AT5G47340,AT5G46330,AT5G28160,AT5G26770,AT5G20410,AT5G16910,AT5G15590,AT5G07100,AT5G04390,AT5G04020,AT5G03320,AT5G01730,AT5G01710,AT4G37670,AT4G35985,AT4G35070,AT4G34180,AT4G25670,AT4G25460,AT4G24290,AT4G23700,AT4G23010,AT4G21400,AT4G20880,AT4G20320,AT4G19510,AT4G18010,AT4G16890,AT4G16860,AT4G13080,AT4G12040,AT4G10970,AT3G57880,AT3G53150,AT3G52650,AT3G50590,AT3G48790,AT3G48360,AT3G46530,AT3G43880,AT3G42930,AT3G26230,AT3G26000,AT3G24550,AT3G24500,AT3G23220,AT3G20410,AT3G19750,AT3G19610,AT3G17410,AT3G16040,AT3G15770,AT3G13380,AT3G07780,AT3G03870,AT2G47730,AT2G47520,AT2G46600,AT2G46010,AT2G44750,AT2G39420,AT2G39380,AT2G36430,AT2G32880,AT2G25470,AT2G18630,AT2G17290,AT1G78070,AT1G77530,AT1G72410,AT1G70690,AT1G70130,AT1G68190,AT1G67310,AT1G66690,AT1G64800,AT1G61170,AT1G59124,AT1G55250,AT1G53350,AT1G52100,AT1G51850,AT1G33090,AT1G31930,AT1G25550,AT1G22650,AT1G18900,AT1G18030,AT1G17180,AT1G12880,AT1G12750,AT1G10920,AT1G10650,AT1G10050,AT1G08450,AT1G05680,AT1G03770 RAMONELL_CRAB-SHELL-CHITIN-TREATED_SEEDLING_DN Repressed at Least 1.5-Fold in the Crab Shell Chitin Mixture-Treated Seedlings (Table S 5 PubmedID:15923325) AT1G03920,AT1G04930,AT1G05160,AT1G05250,AT1G07260,AT1G08180,AT1G08325,AT1G09220,AT1G10480,AT1G11100,AT1G12040,AT1G12160,AT1G12970,AT1G13140,AT1G13600,AT1G14890,AT1G15100,AT1G15870,AT1G16800,AT1G18100,AT1G18490,AT1G19900,AT1G20160,AT1G21310,AT1G22985,AT1G23720,AT1G26250,AT1G30240,AT1G30515,AT1G30940,AT1G31770,AT1G31830,AT1G32570,AT1G33700,AT1G44050,AT1G44835,AT1G44970,AT1G47820,AT1G48930,AT1G49150,AT1G49310,AT1G49390,AT1G50000,AT1G50090,AT1G50910,AT1G52880,AT1G54260,AT1G54970,AT1G55190,AT1G56010,AT1G56080,AT1G57790,AT1G58150,AT1G60560,AT1G61830,AT1G62620,AT1G62870,AT1G62930,AT1G66950,AT1G67300,AT1G70350,AT1G70460,AT1G71910,AT1G72050,AT1G73177,AT1G73260,AT1G73270,AT1G75470,AT1G75980,AT1G76170,AT1G76590,AT1G78550,AT1G78600,AT2G02630,AT2G02680,AT2G02700,AT2G03050,AT2G04420,AT2G11140,AT2G13840,AT2G15370,AT2G15520,AT2G16970,AT2G17230,AT2G20520,AT2G22270,AT2G22800,AT2G23130,AT2G23620,AT2G24980,AT2G25990,AT2G27360,AT2G27790,AT2G27940,AT2G28260,AT2G31380,AT2G33460,AT2G34340,AT2G34390,AT2G35470,AT2G37380,AT2G37870,AT2G40900,AT2G41780,AT2G43260,AT2G44110,AT2G44630,AT2G46250,AT2G47930,AT3G01260,AT3G02570,AT3G02885,AT3G02910,AT3G03190,AT3G03270,AT3G03360,AT3G07730,AT3G11090,AT3G13900,AT3G14510,AT3G15080,AT3G15310,AT3G16570,AT3G18400,AT3G19230,AT3G19470,AT3G20090,AT3G20340,AT3G21510,AT3G21680,AT3G22550,AT3G22740,AT3G23190,AT3G26770,AT3G26810,AT3G27310,AT3G27550,AT3G28970,AT3G29035,AT3G29090,AT3G29635,AT3G30320,AT3G31360,AT3G44440,AT3G44510,AT3G45110,AT3G45690,AT3G48940,AT3G50300,AT3G53940,AT3G54590,AT3G56160,AT3G58520,AT3G58710,AT3G58810,AT3G63220,AT4G00960,AT4G04500,AT4G08410,AT4G08780,AT4G08930,AT4G10330,AT4G12300,AT4G13420,AT4G13860,AT4G13950,AT4G15060,AT4G15360,AT4G15390,AT4G15850,AT4G18610,AT4G18670,AT4G21320,AT4G21510,AT4G21880,AT4G22080,AT4G22450,AT4G22480,AT4G25250,AT4G25480,AT4G25750,AT4G26520,AT4G26880,AT4G27900,AT4G28890,AT4G29270,AT4G29530,AT4G30400,AT4G30450,AT4G30670,AT4G31320,AT4G32890,AT4G34600,AT4G34630,AT4G34940,AT4G35030,AT4G35190,AT4G36900,AT4G37190,AT4G39010,AT4G39480,AT5G06630,AT5G06640,AT5G07960,AT5G10130,AT5G10580,AT5G13850,AT5G14410,AT5G15780,AT5G16380,AT5G18680,AT5G18690,AT5G18920,AT5G19970,AT5G22890,AT5G23530,AT5G23810,AT5G24100,AT5G24170,AT5G24313,AT5G26080,AT5G35130,AT5G35260,AT5G41000,AT5G41650,AT5G42630,AT5G43180,AT5G43590,AT5G43610,AT5G43860,AT5G44920,AT5G46040,AT5G46230,AT5G47150,AT5G47610,AT5G47870,AT5G47950,AT5G48175,AT5G48820,AT5G49410,AT5G50760,AT5G50810,AT5G51520,AT5G51700,AT5G51910,AT5G54960,AT5G55170,AT5G55620,AT5G55790,AT5G56300,AT5G56540,AT5G57540,AT5G60460,AT5G60660,AT5G61020,AT5G61540,AT5G64080,AT5G65660,AT5G66690 RAMONELL_CRAB-SHELL-CHITIN-TREATED_CHITO-OCTAMER-TREATED_SEEDLING_UP Induced at Least 1.5-Fold in the Crab Shell Chitin Mixture- and Chito-octamer-Treated Seedlings (Table S 3 PubmedID:15923325) AT5G67450,AT5G67340,AT5G67250,AT5G67080,AT5G66900,AT5G66850,AT5G66800,AT5G66650,AT5G66640,AT5G66620,AT5G66310,AT5G66210,AT5G66070,AT5G65600,AT5G65300,AT5G64905,AT5G64900,AT5G64890,AT5G64870,AT5G64660,AT5G64310,AT5G64260,AT5G63790,AT5G63130,AT5G62770,AT5G62570,AT5G62470,AT5G62460,AT5G62150,AT5G62020,AT5G61900,AT5G61600,AT5G61560,AT5G61320,AT5G61210,AT5G61160,AT5G60900,AT5G60800,AT5G60270,AT5G59820,AT5G59730,AT5G59680,AT5G59550,AT5G59450,AT5G59220,AT5G59070,AT5G58940,AT5G58720,AT5G58680,AT5G58630,AT5G58430,AT5G58120,AT5G57560,AT5G57510,AT5G57220,AT5G57190,AT5G57070,AT5G56340,AT5G54860,AT5G54850,AT5G54730,AT5G54720,AT5G54490,AT5G54070,AT5G53830,AT5G53130,AT5G52870,AT5G52830,AT5G52760,AT5G52750,AT5G52740,AT5G52710,AT5G52670,AT5G52400,AT5G52050,AT5G51190,AT5G50570,AT5G49520,AT5G48655,AT5G48540,AT5G48530,AT5G48430,AT5G48380,AT5G47960,AT5G47910,AT5G47850,AT5G47710,AT5G47240,AT5G47230,AT5G47220,AT5G47070,AT5G46910,AT5G46780,AT5G46710,AT5G46520,AT5G46510,AT5G46480,AT5G46470,AT5G46295,AT5G46080,AT5G45630,AT5G45340,AT5G45110,AT5G45070,AT5G44990,AT5G44910,AT5G44870,AT5G44810,AT5G44350,AT5G44070,AT5G44060,AT5G43890,AT5G43170,AT5G42650,AT5G42440,AT5G42380,AT5G42050,AT5G42010,AT5G41740,AT5G41680,AT5G41550,AT5G41100,AT5G41080,AT5G40920,AT5G40910,AT5G40540,AT5G40460,AT5G40170,AT5G40010,AT5G39785,AT5G39780,AT5G39670,AT5G39580,AT5G39100,AT5G39020,AT5G38990,AT5G38310,AT5G38210,AT5G37770,AT5G37490,AT5G35735,AT5G28630,AT5G28610,AT5G27420,AT5G26920,AT5G26340,AT5G26030,AT5G25930,AT5G25920,AT5G25910,AT5G25440,AT5G25260,AT5G25170,AT5G25040,AT5G24600,AT5G24590,AT5G24210,AT5G24110,AT5G23510,AT5G22690,AT5G22630,AT5G22540,AT5G22530,AT5G22250,AT5G20480,AT5G20230,AT5G20050,AT5G19260,AT5G19240,AT5G18490,AT5G18470,AT5G18400,AT5G18360,AT5G18150,AT5G17680,AT5G17350,AT5G16190,AT5G15870,AT5G15730,AT5G15130,AT5G14930,AT5G14730,AT5G14700,AT5G13530,AT5G13200,AT5G13190,AT5G13080,AT5G12940,AT5G12930,AT5G12880,AT5G12340,AT5G11970,AT5G11650,AT5G10695,AT5G10380,AT5G09800,AT5G08350,AT5G08240,AT5G06860,AT5G06740,AT5G06560,AT5G06490,AT5G06320,AT5G05300,AT5G05190,AT5G05140,AT5G04870,AT5G04720,AT5G04550,AT5G04340,AT5G04330,AT5G03720,AT5G03390,AT5G03380,AT5G03210,AT5G02290,AT5G02230,AT5G01950,AT5G01830,AT5G01560,AT5G01550,AT5G01540,AT4G40080,AT4G40020,AT4G39890,AT4G39830,AT4G39670,AT4G39650,AT4G39640,AT4G39570,AT4G39030,AT4G38940,AT4G38560,AT4G38550,AT4G37900,AT4G37710,AT4G37640,AT4G37610,AT4G37370,AT4G37290,AT4G37260,AT4G36650,AT4G36550,AT4G36500,AT4G36150,AT4G36030,AT4G35600,AT4G35480,AT4G35180,AT4G35110,AT4G34460,AT4G34410,AT4G34400,AT4G34390,AT4G34150,AT4G34135,AT4G33985,AT4G33920,AT4G33420,AT4G33300,AT4G33160,AT4G33060,AT4G33050,AT4G32300,AT4G32060,AT4G32030,AT4G31950,AT4G31800,AT4G31550,AT4G31100,AT4G31000,AT4G30430,AT4G30350,AT4G30290,AT4G30280,AT4G30210,AT4G29780,AT4G29740,AT4G29610,AT4G29050,AT4G28703,AT4G28550,AT4G28460,AT4G28400,AT4G28350,AT4G28085,AT4G27280,AT4G26400,AT4G26200,AT4G26120,AT4G26090,AT4G25810,AT4G25390,AT4G25350,AT4G25030,AT4G24570,AT4G24380,AT4G24240,AT4G24160,AT4G24110,AT4G23880,AT4G23810,AT4G23610,AT4G23570,AT4G23280,AT4G23270,AT4G23260,AT4G23220,AT4G23210,AT4G23200,AT4G23190,AT4G23180,AT4G23030,AT4G22980,AT4G22780,AT4G22710,AT4G22640,AT4G22470,AT4G21390,AT4G20860,AT4G20830,AT4G20780,AT4G20000,AT4G19520,AT4G19370,AT4G18950,AT4G18880,AT4G18540,AT4G18340,AT4G18250,AT4G18170,AT4G17900,AT4G17615,AT4G17500,AT4G17490,AT4G17250,AT4G17230,AT4G16960,AT4G16820,AT4G15975,AT4G14680,AT4G14630,AT4G14610,AT4G14450,AT4G14365,AT4G13510,AT4G12720,AT4G12120,AT4G11900,AT4G11890,AT4G11850,AT4G11660,AT4G11470,AT4G11370,AT4G11360,AT4G11330,AT4G11300,AT4G11280,AT4G11000,AT4G10390,AT4G10170,AT4G09570,AT4G08950,AT4G08850,AT4G08500,AT4G04480,AT4G02410,AT4G02330,AT4G02200,AT4G02075,AT4G01950,AT4G01870,AT4G01750,AT4G01740,AT4G01700,AT4G01300,AT4G01250,AT4G01090,AT4G01010,AT4G00970,AT4G00320,AT4G00300,AT3G62720,AT3G62260,AT3G61670,AT3G61390,AT3G61190,AT3G60690,AT3G60550,AT3G60420,AT3G60120,AT3G59700,AT3G59350,AT3G59310,AT3G59080,AT3G57760,AT3G57750,AT3G57700,AT3G57630,AT3G57550,AT3G57540,AT3G57530,AT3G57450,AT3G57330,AT3G57120,AT3G56880,AT3G56710,AT3G56410,AT3G56400,AT3G56360,AT3G55980,AT3G55950,AT3G55840,AT3G55470,AT3G55430,AT3G55150,AT3G55090,AT3G54420,AT3G54200,AT3G54150,AT3G54100,AT3G54000,AT3G53960,AT3G53810,AT3G53600,AT3G53400,AT3G53280,AT3G53160,AT3G52870,AT3G52800,AT3G52450,AT3G52430,AT3G52400,AT3G51920,AT3G51890,AT3G51450,AT3G50950,AT3G50930,AT3G50900,AT3G50760,AT3G50480,AT3G50260,AT3G50140,AT3G50060,AT3G49810,AT3G49790,AT3G49580,AT3G49530,AT3G49380,AT3G49350,AT3G48650,AT3G48640,AT3G48450,AT3G48090,AT3G47960,AT3G47910,AT3G47570,AT3G47540,AT3G47480,AT3G47340,AT3G46930,AT3G46620,AT3G46600,AT3G46110,AT3G45960,AT3G45830,AT3G45730,AT3G45640,AT3G45040,AT3G44860,AT3G44720,AT3G44630,AT3G44400,AT3G44350,AT3G44260,AT3G43250,AT3G29400,AT3G29010,AT3G28850,AT3G28580,AT3G28450,AT3G28340,AT3G28180,AT3G27560,AT3G26980,AT3G26970,AT3G26910,AT3G26680,AT3G25780,AT3G25610,AT3G25600,AT3G25250,AT3G23250,AT3G23240,AT3G23230,AT3G23170,AT3G22910,AT3G22260,AT3G22160,AT3G22060,AT3G21780,AT3G21650,AT3G21630,AT3G21520,AT3G21080,AT3G21070,AT3G20590,AT3G20520,AT3G19970,AT3G19580,AT3G19553,AT3G19380,AT3G19030,AT3G19010,AT3G18830,AT3G18710,AT3G18690,AT3G18560,AT3G17700,AT3G17690,AT3G16860,AT3G16720,AT3G16530,AT3G15760,AT3G15530,AT3G15210,AT3G15130,AT3G15060,AT3G14620,AT3G14470,AT3G14225,AT3G14090,AT3G14050,AT3G13430,AT3G13100,AT3G12910,AT3G12740,AT3G11840,AT3G11820,AT3G10930,AT3G10720,AT3G10640,AT3G09940,AT3G09870,AT3G09830,AT3G09520,AT3G09410,AT3G09020,AT3G09010,AT3G08760,AT3G08720,AT3G08710,AT3G07600,AT3G07040,AT3G06890,AT3G06020,AT3G05580,AT3G05370,AT3G05320,AT3G05200,AT3G04640,AT3G04210,AT3G04200,AT3G04110,AT3G03020,AT3G02840,AT3G02800,AT3G02130,AT3G02040,AT3G01840,AT3G01830,AT3G01290,AT2G48010,AT2G47140,AT2G47060,AT2G46940,AT2G46620,AT2G46500,AT2G46440,AT2G46400,AT2G45760,AT2G45080,AT2G44840,AT2G44500,AT2G44490,AT2G44460,AT2G44370,AT2G43620,AT2G43320,AT2G43000,AT2G42950,AT2G42360,AT2G41890,AT2G41880,AT2G41730,AT2G41640,AT2G41380,AT2G41100,AT2G41010,AT2G40740,AT2G40270,AT2G40180,AT2G40140,AT2G40000,AT2G39660,AT2G39650,AT2G39400,AT2G39210,AT2G39200,AT2G38870,AT2G38790,AT2G38590,AT2G38470,AT2G37940,AT2G37810,AT2G37730,AT2G37710,AT2G37430,AT2G36950,AT2G36790,AT2G36770,AT2G36690,AT2G36650,AT2G36440,AT2G36220,AT2G36120,AT2G35980,AT2G35930,AT2G35715,AT2G35710,AT2G35000,AT2G34930,AT2G34650,AT2G33710,AT2G33580,AT2G32800,AT2G32660,AT2G32210,AT2G32190,AT2G32140,AT2G32030,AT2G32020,AT2G31990,AT2G31945,AT2G31880,AT2G31230,AT2G30750,AT2G30140,AT2G30020,AT2G29720,AT2G29110,AT2G28940,AT2G28830,AT2G28820,AT2G28400,AT2G28210,AT2G27830,AT2G27660,AT2G27500,AT2G27310,AT2G27260,AT2G27080,AT2G26560,AT2G26530,AT2G26380,AT2G26190,AT2G25735,AT2G25460,AT2G24600,AT2G24570,AT2G24160,AT2G23810,AT2G23770,AT2G23680,AT2G23450,AT2G23420,AT2G23320,AT2G23270,AT2G22890,AT2G22880,AT2G22500,AT2G22300,AT2G22190,AT2G21780,AT2G21120,AT2G20960,AT2G20900,AT2G20870,AT2G20320,AT2G20145,AT2G19710,AT2G19190,AT2G19130,AT2G18690,AT2G18680,AT2G18210,AT2G17740,AT2G17480,AT2G17220,AT2G17040,AT2G16900,AT2G15760,AT2G15490,AT2G15480,AT2G15390,AT2G15120,AT2G15040,AT2G14080,AT2G13790,AT2G13780,AT2G06530,AT2G05940,AT2G05350,AT2G04500,AT2G04040,AT2G03530,AT2G02860,AT2G02450,AT2G02370,AT2G02220,AT2G02010,AT2G01450,AT2G01180,AT1G80840,AT1G80820,AT1G80450,AT1G79680,AT1G79670,AT1G78410,AT1G77910,AT1G77900,AT1G77500,AT1G76970,AT1G76740,AT1G76700,AT1G76690,AT1G76650,AT1G76600,AT1G76360,AT1G76210,AT1G76070,AT1G76040,AT1G75020,AT1G74680,AT1G74650,AT1G74450,AT1G74440,AT1G74360,AT1G74330,AT1G73805,AT1G73800,AT1G73540,AT1G73500,AT1G73080,AT1G73010,AT1G72950,AT1G72940,AT1G72930,AT1G72920,AT1G72900,AT1G72520,AT1G72280,AT1G72240,AT1G72060,AT1G71697,AT1G71400,AT1G71330,AT1G70985,AT1G70740,AT1G70530,AT1G70520,AT1G70420,AT1G70170,AT1G70140,AT1G69930,AT1G69920,AT1G69910,AT1G69890,AT1G69840,AT1G69523,AT1G69490,AT1G69270,AT1G68840,AT1G68765,AT1G68690,AT1G68450,AT1G68360,AT1G68340,AT1G68330,AT1G68320,AT1G67980,AT1G67970,AT1G67920,AT1G67880,AT1G67810,AT1G67530,AT1G67520,AT1G67470,AT1G67060,AT1G67000,AT1G66920,AT1G66880,AT1G66500,AT1G66400,AT1G66160,AT1G66090,AT1G65790,AT1G65690,AT1G65510,AT1G65490,AT1G65400,AT1G65390,AT1G64610,AT1G64380,AT1G64280,AT1G64160,AT1G63830,AT1G63750,AT1G63720,AT1G63350,AT1G62420,AT1G62300,AT1G61890,AT1G61820,AT1G61560,AT1G61550,AT1G61460,AT1G61420,AT1G61370,AT1G61360,AT1G61340,AT1G59910,AT1G59740,AT1G59620,AT1G59590,AT1G58420,AT1G57990,AT1G57630,AT1G56540,AT1G56510,AT1G56150,AT1G56120,AT1G56060,AT1G55920,AT1G55545,AT1G55460,AT1G55450,AT1G53440,AT1G53430,AT1G53170,AT1G53080,AT1G52900,AT1G51920,AT1G51915,AT1G51890,AT1G51820,AT1G51800,AT1G51790,AT1G51700,AT1G51660,AT1G51620,AT1G51280,AT1G50740,AT1G49780,AT1G49000,AT1G44100,AT1G43000,AT1G42990,AT1G42980,AT1G36640,AT1G36130,AT1G35710,AT1G35350,AT1G35210,AT1G35140,AT1G34750,AT1G34420,AT1G34260,AT1G33760,AT1G33610,AT1G33600,AT1G33590,AT1G33420,AT1G32960,AT1G32920,AT1G32640,AT1G31540,AT1G31290,AT1G31130,AT1G30810,AT1G30720,AT1G30700,AT1G30620,AT1G30370,AT1G30040,AT1G29690,AT1G29340,AT1G28600,AT1G28480,AT1G28380,AT1G28370,AT1G28190,AT1G27770,AT1G27730,AT1G27100,AT1G26420,AT1G26380,AT1G25400,AT1G25390,AT1G25370,AT1G24150,AT1G24140,AT1G23840,AT1G23830,AT1G23710,AT1G22890,AT1G22810,AT1G22280,AT1G21450,AT1G21230,AT1G21130,AT1G21120,AT1G21110,AT1G21100,AT1G21010,AT1G20823,AT1G20520,AT1G20510,AT1G20350,AT1G20310,AT1G20300,AT1G19970,AT1G19780,AT1G19770,AT1G19380,AT1G19300,AT1G19270,AT1G19180,AT1G19020,AT1G18740,AT1G18570,AT1G18390,AT1G18380,AT1G17990,AT1G17830,AT1G17750,AT1G17710,AT1G17420,AT1G17380,AT1G17240,AT1G16670,AT1G16640,AT1G16420,AT1G16150,AT1G16130,AT1G16090,AT1G15890,AT1G15430,AT1G15010,AT1G14870,AT1G14550,AT1G14540,AT1G14480,AT1G14370,AT1G14040,AT1G13340,AT1G13210,AT1G12360,AT1G11310,AT1G11200,AT1G11050,AT1G10560,AT1G10340,AT1G09950,AT1G09940,AT1G09070,AT1G08930,AT1G08920,AT1G08310,AT1G07520,AT1G07160,AT1G07135,AT1G07130,AT1G07000,AT1G06140,AT1G05670,AT1G05575,AT1G05340,AT1G05020,AT1G03740,AT1G03730,AT1G03370,AT1G02930,AT1G02660,AT1G02400,AT1G02360,AT1G02310,AT1G01560,AT1G01340,AT1G01260 HE_BR-EARLY3H_DN Down regulated by BR early (within 3 hours) (Table S 1 PubmedID:15681342) AT4G01680,AT5G51830,AT5G01740,AT3G30180,AT1G49500,AT3G50660,AT2G16700,AT3G55960,AT5G57785,AT4G11060,AT2G43060,AT5G63850,AT1G20160,AT2G38000,AT2G36910,AT2G45210,AT5G05690,AT1G09530,AT5G22270,AT1G21050,AT1G71030,AT2G30070,AT4G39480,AT1G77380,AT5G40850,AT5G10290,AT3G23170,AT4G37550,AT5G65310,AT4G36380,AT4G36780,AT5G63790,AT2G39400,AT2G03750,AT4G22200,AT1G23080,AT1G14890,AT1G03880,AT1G07090,AT3G48360,AT3G55130,AT4G37310,AT3G16500,AT4G37300,AT4G39800,AT5G12170,AT1G06570,AT4G35720,AT2G34490,AT1G04310,AT4G28240,AT1G61800,AT5G05880,AT3G47810,AT5G04950,AT4G36040,AT4G15660,AT1G80130,AT2G41230,AT5G62280,AT1G24280,AT2G23180,AT2G42280,AT4G17460,AT4G28520,AT5G59080,AT1G60960,AT4G20070,AT4G37540,AT3G14560,AT1G52190,AT1G76720,AT1G69870,AT4G16146,AT1G77760,AT3G60530,AT5G24210,AT5G22580,AT1G32190,AT5G46330,AT4G15550,AT5G02540,AT3G47800,AT1G77690,AT3G60520,AT4G01870,AT5G22500,AT3G04320,AT1G72180,AT5G39610,AT2G26740,AT2G45050,AT1G66890,AT2G43920,AT1G30110,AT5G57780,AT2G26980,AT5G15830,AT2G46660,AT2G40670,AT4G14130 HE_BR-EARLY3H_UP Up regulated by BR early (within 3 hours) (Table S 1 PubmedID:15681342) AT5G45750,AT5G13220,AT4G00370,AT5G66920,AT4G19420,AT5G39580,AT1G01120,AT1G32920,AT5G16590,AT3G15540,AT4G17670,AT5G24570,AT2G30010,AT1G65840,AT3G47960,AT2G19440,AT1G35180,AT4G22010,AT1G35140,AT5G45670,AT4G31000,AT1G65295,AT5G06720,AT1G78280,AT1G03870,AT3G26970,AT2G38320,AT1G64640,AT2G19800,AT2G21220,AT3G24090,AT3G23730,AT4G13340,AT3G45970,AT1G59500,AT1G29660,AT1G04680,AT3G57450,AT1G68410,AT1G29670,AT1G11545,AT3G05800,AT2G05940,AT5G41080,AT4G12730,AT2G45310,AT3G50830,AT1G30690,AT2G34930,AT3G18830,AT2G35290,AT2G17040,AT2G34510,AT2G19880,AT3G54810,AT5G05180,AT5G64780,AT2G34770,AT3G43720,AT1G71710,AT4G14365,AT4G04540,AT3G05900,AT1G61890,AT4G27280,AT2G41820,AT2G33570,AT2G40610,AT4G01950,AT3G06770,AT1G44350,AT5G62220,AT2G47930,AT5G65390,AT1G04430,AT5G44670,AT3G50340,AT2G44740,AT5G43760,AT3G62720,AT2G35880,AT2G30040,AT5G10430,AT4G28780,AT4G20170,AT4G16563,AT4G36110,AT1G69840,AT5G45950,AT3G14370,AT3G02040,AT4G38860,AT5G03120,AT1G19300,AT2G16280,AT3G10720,AT1G73010,AT3G19970,AT2G01670,AT1G66160,AT4G08950,AT4G15800,AT1G49430,AT5G20790,AT5G01220,AT2G35860,AT5G41400,AT4G18970,AT2G45900,AT1G14780,AT4G38840,AT1G29500,AT4G26320,AT1G78240,AT2G42580,AT2G47270,AT1G10550,AT2G04570,AT1G58420,AT4G03070,AT5G57800,AT4G39840,AT1G75900,AT3G55430,AT3G54690,AT2G19620,AT3G50570,AT1G65310,AT5G64770,AT4G03400,AT5G52900,AT5G54380,AT3G53400,AT3G44735,AT1G76690,AT4G38850,AT1G04240,AT1G72510,AT4G25810,AT5G57560,AT3G16360,AT4G25260,AT3G04210,AT5G44680,AT5G18060,AT4G38400,AT1G75220,AT1G23480,AT4G27720,AT3G49220,AT3G12700,AT2G47440,AT5G09870,AT3G25600,AT3G23800,AT5G65470,AT3G54030,AT4G24510,AT1G66180,AT4G24570,AT1G11260,AT2G31730,AT1G77640,AT1G66400,AT3G16850,AT4G37240,AT5G24030,AT1G76180,AT2G38610,AT5G44050,AT4G37450,AT5G39670,AT3G28340,AT5G01040,AT2G18010,AT4G19030,AT3G05320,AT5G50915,AT2G43290,AT1G29460,AT2G14900,AT5G20270,AT1G66350,AT4G02330,AT2G44500,AT1G76090,AT1G29050,AT4G30290,AT1G23030,AT3G46620,AT4G30280,AT1G57990,AT1G29440,AT1G29430,AT1G78860,AT1G21820,AT5G06870,AT4G01080,AT2G36220,AT4G31800,AT1G64980,AT1G61667,AT1G72150,AT3G26980,AT3G58620,AT3G02170,AT5G37770,AT1G56510,AT4G30440,AT1G07720,AT4G00360,AT2G41640,AT3G06070,AT2G47060,AT3G50560,AT3G28180,AT4G29780,AT1G27210,AT2G34300,AT4G09890,AT3G04640,AT5G25190,AT3G59350 HE_BR-LATE3-24H_DN Down regulated by BR late (between 3 and 24 hours) (Table S 1 PubmedID:15681342) AT4G27450,AT1G22360,AT2G34640,AT1G23180,AT5G14740,AT2G03760,AT5G23310,AT1G02280,AT4G37410,AT1G24340,AT1G23020,AT2G47590,AT1G03220,AT4G01630,AT3G60280,AT1G31230,AT4G02700,AT4G39040,AT2G15890,AT1G14210,AT4G23940,AT2G36950,AT3G04550,AT1G78090,AT3G51600,AT1G15440,AT4G24040,AT2G16060,AT1G09090,AT1G14030,AT4G34970,AT1G03970,AT5G40160,AT1G70300,AT3G27690,AT2G04030,AT2G41800,AT2G19590,AT3G61620,AT1G12040,AT2G47780,AT2G40540,AT4G14690,AT4G33560,AT1G78820,AT4G37980,AT2G17250,AT1G60160,AT2G14050,AT2G29390,AT4G17940,AT5G12030,AT2G42750,AT4G27710,AT2G25980,AT4G16370,AT2G47520,AT2G22990,AT1G55020,AT4G36700,AT2G02160,AT4G35770,AT2G39510 HE_BR-LATE3-24H_UP Up regulated by BR late (between 3 and 24 hours) (Table S 1 PubmedID:15681342) AT1g31580,AT4g13290,245084_at,AT2g23170,AT4g33050,AT2g37710,AT2g30250,AT2g25190,AT3g52500,AT3g50950,AT2g37640,AT4g15610,AT2g47550,AT4g29020,AT4g39030,AT2g30550,AT4g39830,AT2g23560,AT1g65500,AT3g51920,AT4g20860,AT2g19130,AT2g32150,AT2g31880,AT4g36430,AT3g16370,AT2g25300,AT4g39670,AT4g23130,AT1g71880,AT4g13000,AT3g25110,AT2g13790,AT2g21140,AT4g21620,AT1g16420,AT2g01650,AT4g39640,AT2g28400,AT1g12080,AT2g28570,AT4g35330,AT5g20230,AT4g23210,AT1g04220,AT4g23010,AT2g40270,AT4g14400,AT2g18700,AT1g04250,AT5g58670,AT2g40290,AT5g23860,AT2g41540,AT3g19930,AT4g16190,AT4g20260,AT4g32940,AT2g21540,AT4g34480,AT2g15390,AT2g30670,AT5g49630,AT2g38740,AT1g24170,AT1g78490,AT4g04770,AT4g35320,AT2g44130,AT2g18690,AT2g02850,AT3g01930,AT1g53700,AT2g40300,AT4g21830,AT2g17840,AT2g24850,AT4g18430,AT5g64100,AT2g28630,AT2g32450,AT4g24970,AT5g44810,AT4g17070,AT3g50760,AT1g61250,AT2g16630,AT1g30900,AT2g14610,AT1g22890,AT1g62040,AT3g50770,AT4g34150,AT5g01600,AT4g21850,AT4g39510,AT3g60140,AT1g23840,AT5g16990,AT4g13610,AT4g12720,AT2g37940,AT1g70000,AT4g15630,AT2g17120,AT4g30170,AT2g37130,AT4g33910,AT2g06850,AT2g47080,AT2g32560,AT4g19120,AT1g53830,AT1g21830,AT2g33830,AT1g70230,AT4g33100,AT5g11060,AT2g33580,AT4g13890,AT4g14440,AT2g25000,AT4g01070,AT2g41090,AT2g43510,AT4g24120,AT2g28960,AT4g18910,AT1g61140,AT2g17500,AT4g17660,AT1g03370,AT4g13510,AT4g26950,AT3g52430,AT5g15350,AT1g45145,AT2g39010,AT4g03110,AT3g47380,AT1g34750,AT2g37430,AT5g02490,AT2g32800,AT4g23810,AT2g31120,AT2g32680,AT1g50420,AT2g29330,AT4g35600,AT1g79450,AT2g41170,AT2g16530,AT4g14390,AT1g60030,AT2g43920,AT2g02310,AT4g17090,AT2g42610,AT2g32210,AT4g36550,AT2g47130,AT2g24860,AT2g27920,AT3g57240,AT2g02810,AT1g47600,AT1g74650,AT1g62430,AT4g37800,AT5g23270,AT4g28270 NAGPAL_10UM-IAA_0.5H_UP Induced by treatment with 10 uM IAA for 0.5 hours (Table S 3 PubmedID:16107481) AT1G06420,AT1G23030,AT1G23050,AT1G29440,AT2G23170,AT3G29370,AT3G49530,AT5G43700,AT5G45110,AT5G62280,ATpI,psbA,AT1G04240,AT1G29430,AT1G29450,AT1G29460,AT1G29510,AT2G21200,AT4G15660,AT4G23870,AT5G52900,AT1G18570,AT1G28330,AT1G29500,AT1G72430,AT1G72940,AT2G38470,AT3G23030,AT3G50060,AT3G56400,AT4G27280,AT4G37260,AT5G02760,AT5G47220,AT5G47370 XIE_DCL1-7-DCL4-2-RDR6-15_UP Significantly co-up-regulated in dcl1-7, dcl4-2, and rdr6-15 (Table S 1 PubmedID:16129836) AT5G18040,AT4G29770,AT1G63130,AT1G12770,AT1G62930,AT2G33860,AT5G60450,AT1G78490,AT3G43800 STEIN_SA_PEN3-1-MUTANT_UP Induced-SA or SA Pathway-Associated Genes That Are Hyperinduced in pen3-1 Mutants after Inoculation with Either the Arabidopsis or the Barley Powdery Mildew (Table 1 PubmedID:16473969) AT1G65690,AT1G74710,AT1G75040,AT2G43570,AT2G43590,AT2G46400,AT3G04720,AT3G12500,AT3G48090,AT3G50480,AT3G52430,AT3G57240,AT4G01700,AT4G39030,AT4G39830,AT5G24210,AT5G47120 LEE_COLD_UP Up-regulated Gene List-Cold (Table S 2 PubmedID:16214899) AT1G01140,AT1G07135,AT1G13260,AT1G15010,AT1G18740,AT1G19380,AT1G22570,AT1G27770,AT1G28370,AT1G32640,AT1G42420,AT1G56660,AT1G70090,AT1G70420,AT1G73540,AT1G74450,AT1G76600,AT1G76650,AT1G77640,AT1G80840,AT2G01300,AT2G23810,AT2G27080,AT2G30020,AT2G30040,AT2G35290,AT2G35930,AT2G38470,AT2G41010,AT2G43290,AT2G46400,AT3G02840,AT3G04640,AT3G10930,AT3G16860,AT3G17800,AT3G23170,AT3G24550,AT3G28340,AT3G44260,AT3G46620,AT3G52400,AT3G52800,AT3G55980,AT3G62720,AT4G01250,AT4G02330,AT4G17490,AT4G17615,AT4G18010,AT4G18880,AT4G24380,AT4G24570,AT4G27652,AT4G29780,AT4G31800,AT4G35985,AT5G10695,AT5G11650,AT5G16200,AT5G22630,AT5G24550,AT5G24590,AT5G26920,AT5G37770,AT5G45340,AT5G51190,AT5G51990,AT5G53290,AT5G54490,AT5G63130,AT5G64310,AT5G66210,AT5G67300,AT1G01470,AT1G02660,AT1G07150,AT1G09070,AT1G09350,AT1G09950,AT1G10080,AT1G10410,AT1G11210,AT1G11960,AT1G16850,AT1G19180,AT1G20440,AT1G20450,AT1G23710,AT1G25400,AT1G27200,AT1G27730,AT1G32860,AT1G47710,AT1G49450,AT1G49720,AT1G51090,AT1G60190,AT1G61340,AT1G62570,AT1G63020,AT1G63090,AT1G64890,AT1G65390,AT1G67970,AT1G68050,AT1G68500,AT1G69570,AT1G69870,AT1G75860,AT1G76580,AT1G76590,AT1G78070,AT1G79660,AT2G16700,AT2G16890,AT2G17840,AT2G19440,AT2G22500,AT2G23120,AT2G23340,AT2G27500,AT2G30250,AT2G31360,AT2G32050,AT2G34930,AT2G35700,AT2G36220,AT2G38640,AT2G40000,AT2G40140,AT2G40350,AT2G42530,AT3G02140,AT3G09520,AT3G10300,AT3G13310,AT3G14050,AT3G15210,AT3G15450,AT3G20500,AT3G24520,AT3G28310,AT3G45970,AT3G49530,AT3G50260,AT3G50930,AT3G50970,AT3G55430,AT3G56880,AT3G57760,AT3G59350,AT3G61190,AT4G05070,AT4G09710,AT4G11280,AT4G12000,AT4G15130,AT4G17090,AT4G18280,AT4G20830,AT4G21560,AT4G24960,AT4G25470,AT4G25480,AT4G25490,AT4G27280,AT4G27460,AT4G27570,AT4G29190,AT4G29440,AT4G30350,AT4G32020,AT4G32190,AT4G33920,AT4G33985,AT4G34150,AT4G35320,AT4G35480,AT4G36010,AT4G36500,AT4G38400,AT4G38580,AT5G04340,AT5G05410,AT5G06320,AT5G07310,AT5G07920,AT5G10100,AT5G15960,AT5G17350,AT5G17460,AT5G17850,AT5G17970,AT5G20230,AT5G24470,AT5G25110,AT5G28430,AT5G37440,AT5G43260,AT5G46710,AT5G47060,AT5G47230,AT5G49480,AT5G52310,AT5G54470,AT5G54720,AT5G57560,AT5G58650,AT5G59550,AT5G59730,AT5G59820,AT5G60680,AT5G62360,AT5G63330,AT5G64260,AT5G64870,AT5G65300,AT5G66650,cox1,AT1G01500,AT1G01940,AT1G02270,AT1G02310,AT1G02330,AT1G02400,AT1G02820,AT1G04400,AT1G04430,AT1G05340,AT1G06780,AT1G07360,AT1G07430,AT1G07530,AT1G08500,AT1G08880,AT1G08900,AT1G08920,AT1G10090,AT1G10170,AT1G10580,AT1G11170,AT1G11390,AT1G11530,AT1G12710,AT1G13560,AT1G14530,AT1G14780,AT1G16840,AT1G16860,AT1G17460,AT1G18850,AT1G19270,AT1G20100,AT1G20693,AT1G20696,AT1G21120,AT1G21130,AT1G21670,AT1G21680,AT1G21790,AT1G25250,AT1G25320,AT1G25550,AT1G25988,AT1G27630,AT1G27910,AT1G27920,AT1G27930,AT1G28050,AT1G28060,AT1G28200,AT1G29395,AT1G30360,AT1G30720,AT1G30960,AT1G32170,AT1G32440,AT1G32870,AT1G33230,AT1G34220,AT1G43620,AT1G43860,AT1G43890,AT1G49560,AT1G51610,AT1G52280,AT1G53035,AT1G53400,AT1G53430,AT1G54410,AT1G55110,AT1G56300,AT1G60140,AT1G61380,AT1G61730,AT1G61890,AT1G62300,AT1G62710,AT1G63880,AT1G65220,AT1G66000,AT1G67310,AT1G67360,AT1G67850,AT1G67920,AT1G68470,AT1G69250,AT1G69260,AT1G69270,AT1G70780,AT1G70900,AT1G71000,AT1G71697,AT1G71950,AT1G72700,AT1G73630,AT1G74750,AT1G74840,AT1G75400,AT1G76180,AT1G76270,AT1G77120,AT1G77450,AT1G77760,AT1G78240,AT1G78310,AT1G78420,AT1G80110,AT1G80130,AT2G01150,AT2G01930,AT2G02120,AT2G02160,AT2G02490,AT2G03020,AT2G06530,AT2G12550,AT2G15560,AT2G15970,AT2G16350,AT2G17280,AT2G17870,AT2G18915,AT2G19450,AT2G19860,AT2G20370,AT2G21180,AT2G21620,AT2G22080,AT2G22190,AT2G22590,AT2G22860,AT2G23760,AT2G24500,AT2G25620,AT2G26830,AT2G26920,AT2G27200,AT2G27510,AT2G28550,AT2G28900,AT2G28930,AT2G32190,AT2G32210,AT2G34720,AT2G34850,AT2G36270,AT2G36320,AT2G36390,AT2G36410,AT2G37520,AT2G37970,AT2G38465,AT2G39920,AT2G40880,AT2G40900,AT2G41190,AT2G41630,AT2G41900,AT2G42150,AT2G42520,AT2G42540,AT2G43500,AT2G44200,AT2G45980,AT2G46600,AT2G47410,AT2G47890,AT2G47990,AT3G01560,AT3G01650,AT3G02990,AT3G03170,AT3G03440,AT3G03640,AT3G04010,AT3G04060,AT3G05660,AT3G05880,AT3G06410,AT3G07360,AT3G07640,AT3G08710,AT3G08760,AT3G09390,AT3G09540,AT3G10500,AT3G11410,AT3G11420,AT3G12320,AT3G12980,AT3G13350,AT3G14595,AT3G14690,AT3G14820,AT3G14890,AT3G15440,AT3G15730,AT3G16560,AT3G16800,AT3G17130,AT3G18440,AT3G18610,AT3G19030,AT3G19240,AT3G19290,AT3G19340,AT3G19960,AT3G20720,AT3G21420,AT3G21480,AT3G22380,AT3G22910,AT3G24280,AT3G25140,AT3G26970,AT3G27210,AT3G27880,AT3G28210,AT3G28530,AT3G29170,AT3G32920,AT3G45260,AT3G45600,AT3G45960,AT3G46460,AT3G47550,AT3G48510,AT3G51550,AT3G51895,AT3G51920,AT3G52870,AT3G53230,AT3G53260,AT3G53400,AT3G53620,AT3G53810,AT3G53990,AT3G55580,AT3G55760,AT3G57090,AT3G57430,AT3G58540,AT3G58790,AT3G59820,AT3G60980,AT3G61060,AT3G61260,AT3G62240,AT3G62420,AT4G01120,AT4G01130,AT4G01550,AT4G01870,AT4G02880,AT4G03430,AT4G04330,AT4G04860,AT4G05050,AT4G05330,AT4G05410,AT4G10040,AT4G11220,AT4G11600,AT4G12280,AT4G12430,AT4G12750,AT4G13160,AT4G13850,AT4G15420,AT4G15770,AT4G15910,AT4G16500,AT4G17260,AT4G17550,AT4G18070,AT4G18240,AT4G18530,AT4G18650,AT4G18700,AT4G19200,AT4G19960,AT4G20880,AT4G20890,AT4G22270,AT4G22380,AT4G22590,AT4G23040,AT4G23450,AT4G23630,AT4G23870,AT4G23880,AT4G23920,AT4G24220,AT4G25500,AT4G25650,AT4G25660,AT4G26080,AT4G26750,AT4G27410,AT4G27520,AT4G27657,AT4G27820,AT4G27830,AT4G27970,AT4G28320,AT4G28330,AT4G29510,AT4G30430,AT4G30935,AT4G31140,AT4G31980,AT4G33070,AT4G33700,AT4G33905,AT4G33980,AT4G34120,AT4G34590,AT4G34740,AT4G34910,AT4G34990,AT4G35510,AT4G35940,AT4G36020,AT4G36680,AT4G36900,AT4G36920,AT4G37320,AT4G38380,AT4G39260,AT4G39670,AT5G01200,AT5G01380,AT5G02860,AT5G03240,AT5G04250,AT5G04760,AT5G05220,AT5G06700,AT5G06760,AT5G07070,AT5G09420,AT5G09440,AT5G10790,AT5G11110,AT5G11150,AT5G12140,AT5G12220,AT5G13200,AT5G14270,AT5G14550,AT5G14570,AT5G15190,AT5G16010,AT5G16040,AT5G16380,AT5G17300,AT5G17490,AT5G18400,AT5G18550,AT5G19875,AT5G20600,AT5G20730,AT5G20830,AT5G20910,AT5G24570,AT5G26040,AT5G26340,AT5G27930,AT5G28080,AT5G28150,AT5G35735,AT5G37500,AT5G38710,AT5G39400,AT5G39410,AT5G40390,AT5G40880,AT5G41460,AT5G42380,AT5G42570,AT5G43860,AT5G46520,AT5G46920,AT5G47020,AT5G47120,AT5G47650,AT5G48250,AT5G48260,AT5G49900,AT5G50320,AT5G50720,AT5G50840,AT5G51130,AT5G51180,AT5G51570,AT5G51830,AT5G52660,AT5G53590,AT5G54930,AT5G54940,AT5G55180,AT5G55400,AT5G55970,AT5G55990,AT5G56190,AT5G56630,AT5G57100,AT5G57110,AT5G57630,AT5G58070,AT5G58670,AT5G58690,AT5G58700,AT5G59950,AT5G61230,AT5G61370,AT5G61380,AT5G61810,AT5G62130,AT5G62150,AT5G62460,AT5G62640,AT5G62910,AT5G63320,AT5G63370,AT5G63610,AT5G63770,AT5G63790,AT5G63880,AT5G63990,AT5G64080,AT5G66050,nad6 LEE_COLD-TRANSIENTLY_UP Up-regulated (ETU) Gene List-Cold Early Transiently . (Table S 3 PubmedID:16214899) AT1G01140,AT1G07135,AT1G13260,AT1G15010,AT1G18740,AT1G19380,AT1G22570,AT1G27770,AT1G28370,AT1G32640,AT1G42420,AT1G56660,AT1G70090,AT1G70420,AT1G73540,AT1G74450,AT1G76600,AT1G76650,AT1G77640,AT1G80840,AT2G01300,AT2G23810,AT2G27080,AT2G30020,AT2G30040,AT2G35290,AT2G35930,AT2G38470,AT2G41010,AT2G43290,AT2G46400,AT3G02840,AT3G04640,AT3G10930,AT3G16860,AT3G17800,AT3G23170,AT3G24550,AT3G28340,AT3G44260,AT3G46620,AT3G52400,AT3G52800,AT3G55980,AT3G62720,AT4G01250,AT4G02330,AT4G17490,AT4G17615,AT4G18010,AT4G18880,AT4G24380,AT4G24570,AT4G27652,AT4G29780,AT4G31800,AT4G35985,AT5G10695,AT5G11650,AT5G16200,AT5G22630,AT5G24550,AT5G24590,AT5G26920,AT5G37770,AT5G45340,AT5G51190,AT5G51990,AT5G53290,AT5G54490,AT5G63130,AT5G64310,AT5G66210,AT5G67300 LEE_COLD-CONTINUALLY_UP Up-regulated (ECU) Gene List-Cold Early Continually (Table S 4 PubmedID:16214899) AT1G01470,AT1G02660,AT1G07150,AT1G09070,AT1G09350,AT1G09950,AT1G10080,AT1G10410,AT1G11210,AT1G11960,AT1G16850,AT1G19180,AT1G20440,AT1G20450,AT1G23710,AT1G25400,AT1G27200,AT1G27730,AT1G32860,AT1G47710,AT1G49450,AT1G49720,AT1G51090,AT1G60190,AT1G61340,AT1G62570,AT1G63020,AT1G63090,AT1G64890,AT1G65390,AT1G67970,AT1G68050,AT1G68500,AT1G69570,AT1G69870,AT1G75860,AT1G76580,AT1G76590,AT1G78070,AT1G79660,AT2G16700,AT2G16890,AT2G17840,AT2G19440,AT2G22500,AT2G23120,AT2G23340,AT2G27500,AT2G30250,AT2G31360,AT2G32050,AT2G34930,AT2G35700,AT2G36220,AT2G38640,AT2G40000,AT2G40140,AT2G40350,AT2G42530,AT3G02140,AT3G09520,AT3G10300,AT3G13310,AT3G14050,AT3G15210,AT3G15450,AT3G20500,AT3G24520,AT3G28310,AT3G45970,AT3G49530,AT3G50260,AT3G50930,AT3G50970,AT3G55430,AT3G56880,AT3G57760,AT3G59350,AT3G61190,AT4G05070,AT4G09710,AT4G11280,AT4G12000,AT4G15130,AT4G17090,AT4G18280,AT4G20830,AT4G21560,AT4G24960,AT4G25470,AT4G25480,AT4G25490,AT4G27280,AT4G27460,AT4G27570,AT4G29190,AT4G29440,AT4G30350,AT4G32020,AT4G32190,AT4G33920,AT4G33985,AT4G34150,AT4G35320,AT4G35480,AT4G36010,AT4G36500,AT4G38400,AT4G38580,AT5G04340,AT5G05410,AT5G06320,AT5G07310,AT5G07920,AT5G10100,AT5G15960,AT5G17350,AT5G17460,AT5G17850,AT5G17970,AT5G20230,AT5G24470,AT5G25110,AT5G28430,AT5G37440,AT5G43260,AT5G46710,AT5G47060,AT5G47230,AT5G49480,AT5G52310,AT5G54470,AT5G54720,AT5G57560,AT5G58650,AT5G59550,AT5G59730,AT5G59820,AT5G60680,AT5G62360,AT5G63330,AT5G64260,AT5G64870,AT5G65300,AT5G66650,cox1 LEE_COLD-LATE_UP Up-regulated (LU) Gene List-Cold Late (Table S 5 PubmedID:16214899) AT1G01500,AT1G01940,AT1G02270,AT1G02310,AT1G02330,AT1G02400,AT1G02820,AT1G04400,AT1G04430,AT1G05340,AT1G06780,AT1G07360,AT1G07430,AT1G07530,AT1G08500,AT1G08880,AT1G08900,AT1G08920,AT1G10090,AT1G10170,AT1G10580,AT1G11170,AT1G11390,AT1G11530,AT1G12710,AT1G13560,AT1G14530,AT1G14780,AT1G16840,AT1G16860,AT1G17460,AT1G18850,AT1G19270,AT1G20100,AT1G20693,AT1G20696,AT1G21120,AT1G21130,AT1G21670,AT1G21680,AT1G21790,AT1G25250,AT1G25320,AT1G25550,AT1G25988,AT1G27630,AT1G27910,AT1G27920,AT1G27930,AT1G28050,AT1G28060,AT1G28200,AT1G29395,AT1G30360,AT1G30720,AT1G30960,AT1G32170,AT1G32440,AT1G32870,AT1G33230,AT1G34220,AT1G43620,AT1G43860,AT1G43890,AT1G49560,AT1G51610,AT1G52280,AT1G53035,AT1G53400,AT1G53430,AT1G54410,AT1G55110,AT1G56300,AT1G60140,AT1G61380,AT1G61730,AT1G61890,AT1G62300,AT1G62710,AT1G63880,AT1G65220,AT1G66000,AT1G67310,AT1G67360,AT1G67850,AT1G67920,AT1G68470,AT1G69250,AT1G69260,AT1G69270,AT1G70780,AT1G70900,AT1G71000,AT1G71697,AT1G71950,AT1G72700,AT1G73630,AT1G74750,AT1G74840,AT1G75400,AT1G76180,AT1G76270,AT1G77120,AT1G77450,AT1G77760,AT1G78240,AT1G78310,AT1G78420,AT1G80110,AT1G80130,AT2G01150,AT2G01930,AT2G02120,AT2G02160,AT2G02490,AT2G03020,AT2G06530,AT2G12550,AT2G15560,AT2G15970,AT2G16350,AT2G17280,AT2G17870,AT2G18915,AT2G19450,AT2G19860,AT2G20370,AT2G21180,AT2G21620,AT2G22080,AT2G22190,AT2G22590,AT2G22860,AT2G23760,AT2G24500,AT2G25620,AT2G26830,AT2G26920,AT2G27200,AT2G27510,AT2G28550,AT2G28900,AT2G28930,AT2G32190,AT2G32210,AT2G34720,AT2G34850,AT2G36270,AT2G36320,AT2G36390,AT2G36410,AT2G37520,AT2G37970,AT2G38465,AT2G39920,AT2G40880,AT2G40900,AT2G41190,AT2G41630,AT2G41900,AT2G42150,AT2G42520,AT2G42540,AT2G43500,AT2G44200,AT2G45980,AT2G46600,AT2G47410,AT2G47890,AT2G47990,AT3G01560,AT3G01650,AT3G02990,AT3G03170,AT3G03440,AT3G03640,AT3G04010,AT3G04060,AT3G05660,AT3G05880,AT3G06410,AT3G07360,AT3G07640,AT3G08710,AT3G08760,AT3G09390,AT3G09540,AT3G10500,AT3G11410,AT3G11420,AT3G12320,AT3G12980,AT3G13350,AT3G14595,AT3G14690,AT3G14820,AT3G14890,AT3G15440,AT3G15730,AT3G16560,AT3G16800,AT3G17130,AT3G18440,AT3G18610,AT3G19030,AT3G19240,AT3G19290,AT3G19340,AT3G19960,AT3G20720,AT3G21420,AT3G21480,AT3G22380,AT3G22910,AT3G24280,AT3G25140,AT3G26970,AT3G27210,AT3G27880,AT3G28210,AT3G28530,AT3G29170,AT3G32920,AT3G45260,AT3G45600,AT3G45960,AT3G46460,AT3G47550,AT3G48510,AT3G51550,AT3G51895,AT3G51920,AT3G52870,AT3G53230,AT3G53260,AT3G53400,AT3G53620,AT3G53810,AT3G53990,AT3G55580,AT3G55760,AT3G57090,AT3G57430,AT3G58540,AT3G58790,AT3G59820,AT3G60980,AT3G61060,AT3G61260,AT3G62240,AT3G62420,AT4G01120,AT4G01130,AT4G01550,AT4G01870,AT4G02880,AT4G03430,AT4G04330,AT4G04860,AT4G05050,AT4G05330,AT4G05410,AT4G10040,AT4G11220,AT4G11600,AT4G12280,AT4G12430,AT4G12750,AT4G13160,AT4G13850,AT4G15420,AT4G15770,AT4G15910,AT4G16500,AT4G17260,AT4G17550,AT4G18070,AT4G18240,AT4G18530,AT4G18650,AT4G18700,AT4G19200,AT4G19960,AT4G20880,AT4G20890,AT4G22270,AT4G22380,AT4G22590,AT4G23040,AT4G23450,AT4G23630,AT4G23870,AT4G23880,AT4G23920,AT4G24220,AT4G25500,AT4G25650,AT4G25660,AT4G26080,AT4G26750,AT4G27410,AT4G27520,AT4G27657,AT4G27820,AT4G27830,AT4G27970,AT4G28320,AT4G28330,AT4G29510,AT4G30430,AT4G30935,AT4G31140,AT4G31980,AT4G33070,AT4G33700,AT4G33905,AT4G33980,AT4G34120,AT4G34590,AT4G34740,AT4G34910,AT4G34990,AT4G35510,AT4G35940,AT4G36020,AT4G36680,AT4G36900,AT4G36920,AT4G37320,AT4G38380,AT4G39260,AT4G39670,AT5G01200,AT5G01380,AT5G02860,AT5G03240,AT5G04250,AT5G04760,AT5G05220,AT5G06700,AT5G06760,AT5G07070,AT5G09420,AT5G09440,AT5G10790,AT5G11110,AT5G11150,AT5G12140,AT5G12220,AT5G13200,AT5G14270,AT5G14550,AT5G14570,AT5G15190,AT5G16010,AT5G16040,AT5G16380,AT5G17300,AT5G17490,AT5G18400,AT5G18550,AT5G19875,AT5G20600,AT5G20730,AT5G20830,AT5G20910,AT5G24570,AT5G26040,AT5G26340,AT5G27930,AT5G28080,AT5G28150,AT5G35735,AT5G37500,AT5G38710,AT5G39400,AT5G39410,AT5G40390,AT5G40880,AT5G41460,AT5G42380,AT5G42570,AT5G43860,AT5G46520,AT5G46920,AT5G47020,AT5G47120,AT5G47650,AT5G48250,AT5G48260,AT5G49900,AT5G50320,AT5G50720,AT5G50840,AT5G51130,AT5G51180,AT5G51570,AT5G51830,AT5G52660,AT5G53590,AT5G54930,AT5G54940,AT5G55180,AT5G55400,AT5G55970,AT5G55990,AT5G56190,AT5G56630,AT5G57100,AT5G57110,AT5G57630,AT5G58070,AT5G58670,AT5G58690,AT5G58700,AT5G59950,AT5G61230,AT5G61370,AT5G61380,AT5G61810,AT5G62130,AT5G62150,AT5G62460,AT5G62640,AT5G62910,AT5G63320,AT5G63370,AT5G63610,AT5G63770,AT5G63790,AT5G63880,AT5G63990,AT5G64080,AT5G66050,nad6 LEE_COLD_DN Down-regulated Gene List-Cold (Table S 6 PubmedID:16214899) AT1G05610,AT1G10150,AT1G33070,AT1G36730,AT1G77840,AT2G02520,AT2G23900,AT2G45210,AT3G06360,AT3G26510,AT3G61460,AT4G05460,AT4G38840,AT5G10550,AT5G34880,AT5G37930,AT5G47830,AT5G57310,AT5G67420,AT1G30550,AT2G03750,AT3G23880,AT5G02760,AT5G38035,AT1G01490,AT1G04770,AT1G06800,AT1G09250,AT1G09415,AT1G10050,AT1G11700,AT1G12240,AT1G12460,AT1G14360,AT1G14770,AT1G14920,AT1G17990,AT1G18010,AT1G18400,AT1G18590,AT1G18680,AT1G19670,AT1G20560,AT1G21270,AT1G21560,AT1G21820,AT1G23030,AT1G24100,AT1G27210,AT1G28130,AT1G28670,AT1G28680,AT1G29430,AT1G29500,AT1G31350,AT1G33055,AT1G33240,AT1G33520,AT1G33780,AT1G34010,AT1G34210,AT1G35910,AT1G42480,AT1G48480,AT1G51680,AT1G53390,AT1G53650,AT1G54060,AT1G55360,AT1G55910,AT1G55960,AT1G56700,AT1G60010,AT1G62250,AT1G62560,AT1G63260,AT1G63800,AT1G64270,AT1G65840,AT1G65860,AT1G66250,AT1G66840,AT1G66900,AT1G67080,AT1G67480,AT1G67830,AT1G68585,AT1G68780,AT1G69530,AT1G69780,AT1G72430,AT1G72950,AT1G73830,AT1G74090,AT1G74100,AT1G74720,AT1G75130,AT1G76890,AT1G77020,AT1G78090,AT1G78110,AT1G78990,AT1G79720,AT1G80180,AT1G80790,AT2G01420,AT2G01910,AT2G04690,AT2G14750,AT2G22090,AT2G23430,AT2G24150,AT2G24280,AT2G24762,AT2G26170,AT2G27820,AT2G28630,AT2G28950,AT2G29340,AT2G30330,AT2G30460,AT2G31790,AT2G33480,AT2G34150,AT2G34490,AT2G34620,AT2G36910,AT2G38160,AT2G38970,AT2G39440,AT2G40670,AT2G41550,AT2G42760,AT2G43870,AT2G44080,AT2G44300,AT2G44380,AT2G46225,AT2G46330,AT2G46650,AT2G47750,AT3G01360,AT3G01690,AT3G01980,AT3G02170,AT3G02300,AT3G02910,AT3G05230,AT3G06120,AT3G06440,AT3G06470,AT3G06770,AT3G06850,AT3G07130,AT3G07140,AT3G11290,AT3G12610,AT3G14920,AT3G16520,AT3G19850,AT3G22540,AT3G22550,AT3G22680,AT3G22970,AT3G23110,AT3G23290,AT3G23410,AT3G24040,AT3G24770,AT3G25290,AT3G25540,AT3G25570,AT3G26890,AT3G27020,AT3G28040,AT3G28050,AT3G28180,AT3G43800,AT3G45710,AT3G45800,AT3G46540,AT3G47560,AT3G48720,AT3G50750,AT3G51950,AT3G54480,AT3G58990,AT3G60290,AT3G61210,AT3G61820,AT3G61950,AT3G63440,AT3G66656,AT4G01070,AT4G02050,AT4G02540,AT4G03060,AT4G04610,AT4G04740,AT4G04750,AT4G10060,AT4G10270,AT4G12690,AT4G13020,AT4G13050,AT4G14440,AT4G15550,AT4G15960,AT4G16350,AT4G18020,AT4G19160,AT4G19420,AT4G19530,AT4G19670,AT4G22756,AT4G25150,AT4G26950,AT4G27710,AT4G27860,AT4G28100,AT4G28270,AT4G29220,AT4G29890,AT4G30320,AT4G30520,AT4G30993,AT4G31500,AT4G31920,AT4G32710,AT4G34770,AT4G34920,AT4G37550,AT4G39510,AT4G39900,AT4G39940,AT4G39950,AT5G01620,AT5G05690,AT5G06790,AT5G07820,AT5G12900,AT5G13090,AT5G13890,AT5G14430,AT5G16190,AT5G16560,AT5G16940,AT5G18630,AT5G18690,AT5G19630,AT5G25190,AT5G25630,AT5G26960,AT5G27950,AT5G28020,AT5G33280,AT5G35750,AT5G42680,AT5G43070,AT5G43270,AT5G44680,AT5G46790,AT5G48560,AT5G49100,AT5G49360,AT5G50330,AT5G52280,AT5G53020,AT5G53030,AT5G53750,AT5G54510,AT5G55120,AT5G56380,AT5G56870,AT5G57760,AT5G57780,AT5G58930,AT5G61000,AT5G62930,AT5G63480,AT5G64410,AT5G65640,AT5G66690,AT5G66985 LEE_COLD-TRANSIENTLY_DN Down-regulated (ETU) Gene List-Cold Early Transiently . (Table S 7 PubmedID:16214899) AT1G05610,AT1G10150,AT1G33070,AT1G36730,AT1G77840,AT2G02520,AT2G23900,AT2G45210,AT3G06360,AT3G26510,AT3G61460,AT4G05460,AT4G38840,AT5G10550,AT5G34880,AT5G37930,AT5G47830,AT5G57310,AT5G67420 LEE_COLD-EARLY_DN Down-regulated (ECU) Gene List-Cold Early Continually (Table S 8 PubmedID:16214899) AT1G30550,AT2G03750,AT3G23880,AT5G02760,AT5G38035 LEE_COLD-LATE_DN Down-regulated (LU) Gene List-Cold Late (Table S 9 PubmedID:16214899) AT1G01490,AT1G04770,AT1G06800,AT1G09250,AT1G09415,AT1G10050,AT1G11700,AT1G12240,AT1G12460,AT1G14360,AT1G14770,AT1G14920,AT1G17990,AT1G18010,AT1G18400,AT1G18590,AT1G18680,AT1G19670,AT1G20560,AT1G21270,AT1G21560,AT1G21820,AT1G23030,AT1G24100,AT1G27210,AT1G28130,AT1G28670,AT1G28680,AT1G29430,AT1G29500,AT1G31350,AT1G33055,AT1G33240,AT1G33520,AT1G33780,AT1G34010,AT1G34210,AT1G35910,AT1G42480,AT1G48480,AT1G51680,AT1G53390,AT1G53650,AT1G54060,AT1G55360,AT1G55910,AT1G55960,AT1G56700,AT1G60010,AT1G62250,AT1G62560,AT1G63260,AT1G63800,AT1G64270,AT1G65840,AT1G65860,AT1G66250,AT1G66840,AT1G66900,AT1G67080,AT1G67480,AT1G67830,AT1G68585,AT1G68780,AT1G69530,AT1G69780,AT1G72430,AT1G72950,AT1G73830,AT1G74090,AT1G74100,AT1G74720,AT1G75130,AT1G76890,AT1G77020,AT1G78090,AT1G78110,AT1G78990,AT1G79720,AT1G80180,AT1G80790,AT2G01420,AT2G01910,AT2G04690,AT2G14750,AT2G22090,AT2G23430,AT2G24150,AT2G24280,AT2G24762,AT2G26170,AT2G27820,AT2G28630,AT2G28950,AT2G29340,AT2G30330,AT2G30460,AT2G31790,AT2G33480,AT2G34150,AT2G34490,AT2G34620,AT2G36910,AT2G38160,AT2G38970,AT2G39440,AT2G40670,AT2G41550,AT2G42760,AT2G43870,AT2G44080,AT2G44300,AT2G44380,AT2G46225,AT2G46330,AT2G46650,AT2G47750,AT3G01360,AT3G01690,AT3G01980,AT3G02170,AT3G02300,AT3G02910,AT3G05230,AT3G06120,AT3G06440,AT3G06470,AT3G06770,AT3G06850,AT3G07130,AT3G07140,AT3G11290,AT3G12610,AT3G14920,AT3G16520,AT3G19850,AT3G22540,AT3G22550,AT3G22680,AT3G22970,AT3G23110,AT3G23290,AT3G23410,AT3G24040,AT3G24770,AT3G25290,AT3G25540,AT3G25570,AT3G26890,AT3G27020,AT3G28040,AT3G28050,AT3G28180,AT3G43800,AT3G45710,AT3G45800,AT3G46540,AT3G47560,AT3G48720,AT3G50750,AT3G51950,AT3G54480,AT3G58990,AT3G60290,AT3G61210,AT3G61820,AT3G61950,AT3G63440,AT3G66656,AT4G01070,AT4G02050,AT4G02540,AT4G03060,AT4G04610,AT4G04740,AT4G04750,AT4G10060,AT4G10270,AT4G12690,AT4G13020,AT4G13050,AT4G14440,AT4G15550,AT4G15960,AT4G16350,AT4G18020,AT4G19160,AT4G19420,AT4G19530,AT4G19670,AT4G22756,AT4G25150,AT4G26950,AT4G27710,AT4G27860,AT4G28100,AT4G28270,AT4G29220,AT4G29890,AT4G30320,AT4G30520,AT4G30993,AT4G31500,AT4G31920,AT4G32710,AT4G34770,AT4G34920,AT4G37550,AT4G39510,AT4G39900,AT4G39940,AT4G39950,AT5G01620,AT5G05690,AT5G06790,AT5G07820,AT5G12900,AT5G13090,AT5G13890,AT5G14430,AT5G16190,AT5G16560,AT5G16940,AT5G18630,AT5G18690,AT5G19630,AT5G25190,AT5G25630,AT5G26960,AT5G27950,AT5G28020,AT5G33280,AT5G35750,AT5G42680,AT5G43070,AT5G43270,AT5G44680,AT5G46790,AT5G48560,AT5G49100,AT5G49360,AT5G50330,AT5G52280,AT5G53020,AT5G53030,AT5G53750,AT5G54510,AT5G55120,AT5G56380,AT5G56870,AT5G57760,AT5G57780,AT5G58930,AT5G61000,AT5G62930,AT5G63480,AT5G64410,AT5G65640,AT5G66690,AT5G66985 LEE_COLD-ICE1_UP Cold Up-regulated Genes Whose Expression is Affected by ice1 (Table S 12 PubmedID:16214899) AT1G01140,AT1G19380,AT1G27770,AT1G28370,AT1G32640,AT1G77640,AT2G27080,AT2G35930,AT2G38470,AT2G41010,AT2G43290,AT2G46400,AT3G10930,AT3G17800,AT3G24550,AT3G52400,AT3G55980,AT4G01250,AT4G02330,AT4G18010,AT4G24380,AT4G24570,AT4G31800,AT5G16200,AT5G24550,AT5G24590,AT5G37770,AT5G51990,AT5G53290,AT5G67300,AT1G01470,AT1G02660,AT1G07150,AT1G09070,AT1G09350,AT1G10080,AT1G10410,AT1G11960,AT1G16850,AT1G19180,AT1G20440,AT1G20450,AT1G27200,AT1G27730,AT1G32860,AT1G49450,AT1G51090,AT1G62570,AT1G63020,AT1G63090,AT1G65390,AT1G69870,AT1G75860,AT1G76580,AT1G76590,AT1G78070,AT1G79660,AT2G16700,AT2G17840,AT2G23120,AT2G23340,AT2G30250,AT2G32050,AT2G34930,AT2G40350,AT2G42530,AT3G02140,AT3G09520,AT3G10300,AT3G20500,AT3G24520,AT3G28310,AT3G45970,AT3G50260,AT3G50930,AT3G50970,AT3G55430,AT3G57760,AT3G61190,AT4G09710,AT4G12000,AT4G18280,AT4G20830,AT4G24960,AT4G25480,AT4G27280,AT4G27460,AT4G30350,AT4G32190,AT4G33985,AT4G35320,AT4G38580,AT5G06320,AT5G07310,AT5G07920,AT5G10100,AT5G15960,AT5G17350,AT5G17460,AT5G17850,AT5G17970,AT5G20230,AT5G49480,AT5G52310,AT5G54720,AT5G57560,AT5G58650,AT5G59820,AT5G64870,AT5G66650,AT1G02820,AT1G06780,AT1G08900,AT1G10090,AT1G10170,AT1G13560,AT1G14780,AT1G16860,AT1G18850,AT1G25250,AT1G27910,AT1G29395,AT1G30360,AT1G30720,AT1G30960,AT1G43620,AT1G61380,AT1G62300,AT1G63880,AT1G69260,AT1G76180,AT1G77120,AT1G77760,AT1G80130,AT2G01150,AT2G06530,AT2G17280,AT2G22190,AT2G22860,AT2G23760,AT2G28550,AT2G28930,AT2G32190,AT2G32210,AT2G34850,AT2G36270,AT2G40900,AT2G42540,AT2G43500,AT2G44200,AT3G03640,AT3G07360,AT3G09390,AT3G09540,AT3G10500,AT3G11420,AT3G14820,AT3G16800,AT3G18440,AT3G18610,AT3G19240,AT3G19340,AT3G19960,AT3G20720,AT3G24280,AT3G26970,AT3G28210,AT3G28530,AT3G48510,AT3G51895,AT3G51920,AT3G52870,AT3G53230,AT3G53810,AT3G55760,AT3G58540,AT3G58790,AT3G61260,AT4G01120,AT4G01130,AT4G01870,AT4G03430,AT4G04330,AT4G05410,AT4G10040,AT4G12280,AT4G12430,AT4G15910,AT4G16500,AT4G18240,AT4G18650,AT4G19200,AT4G22380,AT4G22590,AT4G23870,AT4G23920,AT4G24220,AT4G27520,AT4G27657,AT4G27820,AT4G27970,AT4G28320,AT4G30430,AT4G31980,AT4G33905,AT4G34590,AT4G35510,AT4G36020,AT4G36680,AT4G36900,AT4G36920,AT4G37320,AT4G39670,AT5G01200,AT5G01380,AT5G09420,AT5G09440,AT5G18400,AT5G18550,AT5G20830,AT5G20910,AT5G24570,AT5G26340,AT5G35735,AT5G37500,AT5G40390,AT5G41460,AT5G46920,AT5G54940,AT5G55180,AT5G55970,AT5G55990,AT5G56630,AT5G57100,AT5G57110,AT5G58670,AT5G58690,AT5G58700,AT5G61810,AT5G63770 LEE_COLD-ICE1_DN Cold Down-regulated Genes Whose Expression is Affected by ice1 (Table S 13 PubmedID:16214899) AT1G05610,AT1G77840,AT2G02520,AT2G23900,AT2G45210,AT3G06360,AT4G38840,AT5G10550,AT5G34880,AT5G47830,AT1G30550,AT2G03750,AT3G23880,AT5G02760,AT5G38035,AT1G06800,AT1G09250,AT1G10050,AT1G12460,AT1G14360,AT1G14920,AT1G18400,AT1G18590,AT1G18680,AT1G21820,AT1G27210,AT1G28670,AT1G28680,AT1G29430,AT1G29500,AT1G34210,AT1G35910,AT1G42480,AT1G51680,AT1G53650,AT1G55960,AT1G56700,AT1G60010,AT1G62250,AT1G66250,AT1G67080,AT1G67830,AT1G68780,AT1G72950,AT1G73830,AT1G74100,AT1G75130,AT1G77020,AT1G78990,AT2G01420,AT2G01910,AT2G04690,AT2G27820,AT2G28630,AT2G29340,AT2G33480,AT2G34150,AT2G34490,AT2G38160,AT2G42760,AT2G44300,AT2G44380,AT2G46650,AT3G01360,AT3G01690,AT3G02910,AT3G06120,AT3G06470,AT3G06850,AT3G12610,AT3G22540,AT3G22550,AT3G22680,AT3G23110,AT3G23410,AT3G24770,AT3G25290,AT3G25540,AT3G26890,AT3G27020,AT3G43800,AT3G45800,AT3G46540,AT3G48720,AT3G51950,AT3G60290,AT3G61210,AT3G61820,AT3G66656,AT4G01070,AT4G04610,AT4G04750,AT4G14440,AT4G15960,AT4G16350,AT4G18020,AT4G19160,AT4G19420,AT4G22756,AT4G25150,AT4G26950,AT4G27860,AT4G30520,AT4G31500,AT4G39940,AT4G39950,AT5G06790,AT5G07820,AT5G12900,AT5G16190,AT5G16560,AT5G16940,AT5G18690,AT5G28020,AT5G33280,AT5G35750,AT5G44680,AT5G49100,AT5G50330,AT5G52280,AT5G53020,AT5G53030,AT5G53750,AT5G54510,AT5G56870,AT5G57760,AT5G57780,AT5G64410,AT5G66690 LEE_COLD_CBF3_ICE1_UP Cold Up-regulated CBF3 Specific Target Genes Whose Expression is Affected by ice1 (Table S 14 PubmedID:16214899) AT1G27730,AT4G15910,AT5G17460,AT5G58670 LEE_COLD-ICE1-CBF3_CBF2_UP Cold Up-regulated CBF3 and CBF2 Target Genes Whose Expression is Affected by ice1 (Table S 15 PubmedID:16214899) AT1G01470,AT1G09350,AT1G16850,AT1G20440,AT1G20450,AT1G51090,AT2G17840,AT2G23120,AT2G42530,AT2G42540,AT3G50970,AT4G24960,AT4G38580,AT5G15960,AT5G52310 LEE_COLD-ICE1-CBF2_UP Cold Up-regulated CBF2 Specific Target Genes Whose Expression is Affected by ice1 (Table S 16 PubmedID:16214899) AT4G12000,AT4G32190,AT1G10410,AT1G27200,AT1G62570,AT1G69870,AT1G76580,AT1G78070,AT1G10090,AT1G29395,AT1G30360,AT1G77120,AT1G80130,AT3G03640,AT3G09540,AT3G55760,AT5G20830,AT5G24570,AT5G57110 VANNESTE_OVERLAP-BETWEEN-STUDY-AND-HIMANEN_UP Upregulated genes-Overlapping between the present study and that of Himanen et (2004) with the cluster combination and the cluster number and profile, respectively (Table S 4 PubmedID:16243906) AT4G28640,AT3G07390,AT1G01140,AT1G67750,AT4G30140,AT1G04680,AT4G23750,AT2G25790,AT5G43700,AT3G08030,AT2G39700,AT3G02885,AT3G01070,AT2G39710,AT1G77690,AT5G59240,AT5G22740,AT3G53900,AT4G25630,AT5G15750,AT5G22650,AT3G23830,AT2G27840,AT3G57150,AT3G12270,AT1G64390,AT1G25260,AT1G28290,AT4G37090,AT5G16750,AT1G48920,AT5G56740,AT5G11240,AT5G02050,AT3G61160,AT3G57000,AT4G36020,AT4G27490,AT4G25340,AT4G25730,AT4G12600,AT4G01560,AT1G71850,AT3G16810,AT3G10690,AT3G03920,AT1G23280,AT1G59990,AT2G40360,AT2G18220,AT2G37990,AT5G53900,AT1G49740,AT2G24500,AT1G31860,AT3G01820,AT2G03730,AT2G23450,AT4G27280,AT3G13790,AT3G01160,AT4G14320,AT4G17520,AT4G15640,AT5G19750,AT5G20890,AT5G15810,AT5G61170,AT5G60670,AT5G56940,AT5G54580,AT5G48760,AT5G35530,AT5G08570,AT5G06360,AT3G62940,AT3G58700,AT3G57610,AT3G56340,AT3G55620,AT3G49320,AT3G46040,AT4G34910,AT4G31700,AT4G21100,AT4G13170,AT4G05400,AT4G02930,AT4G00100,AT3G11250,AT3G13570,AT3G20330,AT3G14600,AT3G22310,AT3G03960,AT3G05590,AT1G64400,AT1G72320,AT1G14300,AT1G15930,AT1G65700,AT2G03820,AT2G11910,AT1G22780,AT1G27400,AT1G10270,AT2G46520,AT2G19540,AT2G44860,AT2G39390,AT2G44120,AT4G29390,AT1G34030,AT1G67620,AT1G52980,AT5G20600,AT5G55280,AT5G04600,AT4G07410,AT1G48570,AT2G23360 VANNESTE_CELL-CYCLE-GENE_DIFF Differentially regulated cell cycle genes at a stringency level of p<0.01. (Table S 7 PubmedID:16243906) AT3G48750,AT1G76540,AT1G20930,AT5G64960,AT1G18040,AT5G63610,AT4G28980,AT1G44110,AT1G80370,AT3G11520,AT2G26760,AT1G20590,AT5G48640,AT1G70210,AT4G34160,AT5G67260,AT5G27620,AT2G26430,AT3G63120,AT5G02470,AT1G47870,AT3G12280,AT1G18670,AT5G44290,AT3G05050,AT1G54610,AT1G71530,AT1G53050 BLASING_3H-NO3_DN Repressed-3h-NO3 (Table S 6 PubmedID:16299223) AT1G66390,AT3G50770,AT1G22160,AT1G64590,AT1G12940,AT5G04120,AT5G24210,AT3G24954,AT4G33040,AT1G76960,AT5G16570,AT5G22300,AT1G67810,AT4G17670,AT1G56650,ATMG00490,AT3G16150,AT4G24000,AT5G17860,AT3G59580,AT1G55760,AT4G12280,AT4G12290,AT2G46600,AT1G21550,AT1G21400,AT1G21245,AT1G21240,AT1G03495,AT3G10420,AT1G80130,AT5G02580,AT4G37990,AT5G55930,AT4G39210,AT2G25625,AT2G11810,AT5G58570,AT2G29460,AT5G39520,AT1G21250,AT5G26920,AT2G07696,ATMG01270,AT3G21420,AT5G59050,AT2G43500,AT1G29395,AT1G54130,AT5G19140,AT1G35710,AT2G32140,AT1G79320,AT5G11930,AT1G76350,AT3G21500,AT5G06510,AT3G25010,ATCG00120,AT5G66815,AT2G29990,AT5G23240,AT3G61890,ATCG00140,AT2G18660,AT5G50160,AT3G22840,AT2G02990,AT4G25010,AT3G44540,AT4G04955,ATCG00130,AT1G08630,AT5G53420,AT3G51860,AT3G17790,AT5G17220,AT1G04330,AT4G13510,AT4G37980,AT4G13920,AT4G13900,AT5G64000,AT4G19430,AT2G17040,AT4G26120,AT3G01990,AT3G47480,AT3G03910,AT3G25020,AT3G24982,AT2G14560,AT3G11010,AT5G27060,AT4G26950,AT1G35910,AT1G54570,AT4G04500,AT1G69490,AT2G41090,AT5G44580,AT1G10070,AT5G42800,AT5G61010,AT5G18130,AT3G03470,AT4G28490,AT1G56710,AT4G23600,AT3G56400,AT4G10120,AT3G56620,AT1G77450,AT5G37580,AT5G50790,AT1G34060,AT1G34040,AT1G68620,AT1G28480,AT4G38560,AT3G01290,AT4G23160,AT4G23140,AT5G39670,AT2G35770,AT3G63380,AT4G33550,AT4G00670,AT1G15410,AT1G59700,AT4G22920,AT5G59540,AT1G13990,AT5G48370,AT2G40250,AT4G15530,AT2G17710,AT2G29670,AT4G32940,AT1G19250,AT1G21520,AT2G24850,AT5G22460,AT3G04210,AT3G19550,AT4G23150,AT1G05560,AT2G26750,AT2G26740,AT3G47780,AT3G48640,AT1G10340,AT4G22880,AT4G22870,AT3G50610,AT5G10760,ATCG00790,AT1G55740,AT5G64410,AT2G23840,AT4G21120,AT1G63800,AT3G44860,AT2G29350,AT1G63340,AT1G62580,AT3G26210,AT3G07720,AT4G16190,AT1G66930,AT1G65790,AT1G65800,AT5G54060,AT5G36130,AT5G36110,AT1G22240,AT4G10310,AT4G39800,AT2G40460,AT1G61120,AT2G47190,AT1G64950,AT2G12190,AT1G64940,AT5G10770,ATCG00530,AT1G52870,AT3G10320,AT5G15290,AT2G37770,AT1G21270,AT3G03870,ATCG00280,AT4G35180,AT5G66170,AT5G55050,AT3G21720,AT1G80160,AT1G51805,AT1G30500,AT5G67430,ATCG00700,AT3G13672,AT3G13950,AT1G33960,AT4G17840,AT2G15830,AT5G02420,AT2G46430,AT2G46440,AT2G26480,AT4G23190,AT5G10380,AT4G23890,AT3G28540,AT5G37600 BLASING_3H-NO3_UP Induced-3h-NO3 (Table S 6 PubmedID:16299223) AT1G49860,AT5G04950,AT5G10210,AT2G15620,AT1G24280,AT1G08090,AT3G49940,AT2G16060,AT2G30670,AT5G18600,AT2G21210,AT1G73600,AT2G48080,AT3G48360,AT4G39675,AT5G67420,AT2G41560,AT4G37540,AT5G62720,AT5G65010,AT1G13300,AT1G78050,AT5G56080,AT3G62930,AT1G67110,AT4G18340,AT1G30510,AT3G19030,AT5G40850,AT1G77760,AT5G19120,AT4G15690,AT1G68670,AT5G41670,AT4G36670,AT1G31200,AT3G25790,AT2G18300,AT5G19970,AT5G19600,AT3G16560,AT4G15700,AT3G47980,AT4G31730,AT4G25835,AT3G15450,AT1G02820,AT3G01260,AT1G68880,AT4G24670,AT2G26980,AT4G05390,AT1G22500,AT5G08360,AT4G30110,AT1G15380,AT2G30040,AT4G38840,AT1G78000,AT4G37610,AT2G28780,AT4G15680,AT5G37260,AT3G46880,AT4G26150,AT2G24762,AT1G08100,AT1G63940,AT1G49500,AT3G63110,AT4G15660,AT4G21760,AT4G36010,AT4G36540,AT4G11460,AT2G47160,AT5G47450,AT4G27520,AT5G52050,AT2G29090,AT4G32950,AT5G18840,AT5G15830,AT1G23870,AT5G13110,AT1G69530,AT1G25550,AT5G53460,AT5G54130,AT1G80440,AT4G18510,AT2G27840,AT5G50200,AT1G03220,AT1G64220,AT1G22650,AT5G65210,AT5G54120,AT5G57560,AT5G10230,AT3G18560,AT1G78090,AT3G46130,AT5G59080,AT4G34760,AT2G10940,AT4G33960,AT3G61190,AT2G22200,AT4G39780,AT4G38340,AT1G26770,AT4G00416,AT4G31910,AT1G11080,AT5G12860,AT1G03850,AT5G13420,AT1G67910,AT1G70410,AT2G41310,AT5G54170,AT5G14740,AT3G45160,AT1G80380,AT5G09800,AT3G28510,AT5G14760,AT1G31320,AT5G20250,AT3G62040,AT3G14940,AT5G12020,AT2G46310,AT1G19050,AT1G62180,AT4G34740,AT4G04940,AT4G15340,AT1G74870,AT3G51350,AT5G07680,AT3G13730,AT5G39590,AT4G25050,AT2G15890,AT3G60750,AT2G23130,AT5G27100,AT5G40890,AT4G37180,AT5G20630,AT1G66140,AT2G05380,AT3G14770,AT1G72610,AT4G09620,AT3G44750,AT1G16170,AT1G68520,AT3G10530,AT1G79140,AT4G38860,AT3G18600,AT3G29030,AT2G21220,AT1G49450,AT3G53460,AT4G23750,AT2G03090,AT2G22330,AT3G50660,AT3G02850,AT1G33055,AT1G51380,AT4G25630,AT5G60680,AT3G07050,AT4G29740,AT4G34290,AT5G62340,AT1G15550,AT1G77380,AT3G06530,AT5G57180,AT3G07350,AT5G42830,AT1G32450,AT5G22920,AT3G15630,AT3G22660,AT1G32920,AT5G14580,AT3G52720,AT5G65660,AT4G34750,AT1G43650,AT4G03500 BLASING_3H-MANNITOL_DN Repressed-3h-mannitol (Table S 6 PubmedID:16299223) AT5G03120,AT1G35140,AT5G57560,AT4G39675,AT4G25810,AT2G19800,AT1G21910,AT5G65730,AT1G30760,AT4G14130,AT2G06850,AT2G10940,AT2G23130,AT1G62500,AT4G26260,AT5G04530,AT1G77640,AT3G45970,AT4G19430,AT3G23730,AT3G30775,AT4G08950,AT5G57550,AT5G01740,AT4G03210,AT5G44130,AT5G19890,AT1G76160,AT1G19530,AT1G63260,AT3G50560,AT3G50570,AT4G12730,AT1G16390,AT3G04290,AT4G23820,AT4G16563,AT4G38400,AT2G17230,AT4G33420,AT1G29270,AT5G65390,AT1G70090,AT3G12110,AT3G19680,AT2G38240,AT1G50040,AT5G41080,AT4G16140,AT4G30610,AT4G30270,AT1G03870,AT1G24020,AT1G74670,AT3G47340,AT4G02130,AT1G10020,AT4G37450,AT2G34930,AT4G28190,AT4G37240,AT1G11580,AT2G34300,AT5G54380,AT2G33570,AT5G14230,AT1G64160,AT4G38690,AT5G01015,AT4G37800,AT4G30280,AT3G43270,AT4G21680,AT1G23480,AT5G19530,AT3G11700,AT2G36870,AT5G39580,AT4G13340,AT3G62720,AT3G16570,AT2G47440,AT5G45670,AT5G14920,AT2G23110,AT2G42580,AT5G64100,AT1G08630,AT1G62480,AT3G06770,AT1G24170,AT2G39010,AT5G44020,AT1G09460,AT1G52250,AT5G50915,AT4G31000,AT5G11420,AT1G76090,AT2G47930,AT2G34600,AT2G17880,AT3G23750,AT1G53730,AT5G43270,AT2G27080,AT4G30996,AT3G16240,AT4G34970,AT1G33790,AT3G07470,AT5G11160,AT5G23020,AT5G08350,AT4G12420,AT4G27720,AT1G04430,AT3G44860,AT1G13250,AT5G24570,AT2G40330,AT1G51940,AT1G19380,AT3G60320,AT3G60490,AT5G01240,AT5G14450,AT5G51720,AT5G48450,AT2G42040,AT1G06350,AT5G13220,AT1G73830,AT3G20340,AT2G27690,AT5G61440,AT1G27460,AT1G55330,AT2G02680,AT3G05910,AT2G31730,AT2G42870,AT3G09940,AT5G15350,AT5G10580,AT3G05490,AT2G19620,AT2G30010,AT1G54020,AT3G60530,AT1G02640,AT5G05440,AT4G26690,AT3G57520,AT1G80050,AT3G61100,AT4G18340,AT4G28780,AT1G57680,AT5G58090,AT3G03190,AT5G19770,AT5G21105,AT5G24420,AT5G66920,AT2G31010,AT5G22920,AT1G30135,AT1G22530,AT3G23805,AT1G29660,AT2G34770,AT1G50460,AT2G30600,AT1G80080,AT1G75240,AT5G60860,AT3G63200,AT3G14240,AT5G18670,AT5G01050,AT5G01040,AT5G06570,AT2G45470,AT2G33330,AT3G28180,AT5G06870,AT2G19170,AT4G10310,AT4G01250,AT4G30440,AT2G35270,AT3G28200,AT2G22125,AT2G30930,AT3G25500,AT5G64620,AT1G77630,AT2G35470,AT1G09090 BLASING_3H-MANNITOL_UP Induced-3h-mannitol (Table S 6 PubmedID:16299223) AT1G26380,AT3G22620,AT1G21120,AT1G21110,AT5G09520,AT1G54540,AT1G52690,AT5G06760,AT5G41040,AT1G69920,AT3G57010,AT3G26830,AT1G26420,AT5G15960,AT5G15970,AT1G49450,AT5G13580,AT4G33550,AT5G52310,AT3G15990,AT2G37870,AT5G24110,AT3G22600,AT4G17280,AT5G28510,AT2G30770,AT5G57220,AT4G36610,AT5G11110,AT3G50970,AT1G78410,AT5G13900,AT5G40990,AT3G01420,AT1G62570,AT2G48130,AT4G24130,AT2G43570,AT1G04220,AT2G47770,AT3G55090,AT3G17790,AT2G46680,AT4G23810,AT5G64905,AT4G10500,AT5G09530,AT2G34610,AT1G15520,AT3G02480,AT2G48140,AT2G30750,AT4G37370,AT3G54150,AT1G65690,AT1G64400,AT1G67920,AT4G23220,AT1G18570,AT3G10340,AT1G14730,AT1G02360,AT5G27420,AT3G12500,AT2G37440,AT1G68850,AT1G69260,AT2G16720,AT5G18470,AT4G23140,AT4G23160,AT2G15120,AT5G23190,AT1G35230,AT2G46440,AT2G46430,AT1G21250,AT4G23180,AT1G66690,AT5G12420,AT4G21390,AT4G28110,AT1G21130,AT5G52750,AT3G28540,AT5G62480,AT1G51920,AT1G26410,AT1G55450,AT3G12910,AT2G38470,AT4G11280,AT4G31950,AT3G25640,AT3G26210,AT3G11430,AT3G45290,AT2G18660,AT4G05100,AT5G47530,AT2G41660,AT4G23700,AT1G74460,AT1G61560,AT1G80820,AT3G60120,AT5G61160,AT5G28520,AT3G57260,AT4G14400,AT5G52760,AT5G15190,AT2G17040,AT2G14560,AT1G51140,AT1G51890,AT2G32240,AT2G43590,AT5G48540,AT5G62150,AT3G23230,AT1G20450,AT1G72060,AT4G35110,AT4G22530,AT2G15970,AT4G11890,AT3G61890,AT5G44070,AT5G19875,AT4G04220,AT2G24600,AT3G23110,AT1G66880,AT2G26560,AT5G28630,AT1G74360,AT3G18830,AT2G29460,AT5G59220,AT1G35710,AT3G22830,AT5G04340,AT3G21520,AT4G01700,AT5G05410,AT4G22690,AT4G22710,AT2G38860,AT1G64380,AT1G05100,AT3G48650,AT2G43000,AT5G25610,AT3G18250,AT1G28190,AT4G14365,AT4G11370,AT3G11410,AT3G57540,AT4G12980,AT3G09220,AT3G50400,AT3G14440,AT3G16000,AT3G12580,AT1G65500,AT1G79680,AT5G24090,AT4G23190,AT2G25160,AT1G78850,AT1G78860,AT2G14610,AT1G19020,AT4G20000,AT2G28630,AT4G39950,AT1G64710,AT5G67340,AT5G19240,AT4G10120,AT5G02020,AT5G57050,AT2G43620,AT3G54420,AT3G04210,AT3G11840,AT2G35770,AT1G18980,AT1G49000,AT5G54610,AT2G02010,AT2G02000,AT4G29800,AT3G29075,AT4G39830,AT5G23220,AT3G26230,AT3G11010,AT5G27060,AT1G68620,AT4G23450,AT5G39020,AT5G10230,AT1G64590,AT1G17360 BLASING_4H-CARBON-FIXCATION_DN Repressed-4h-carbon fixcation (Table S 6 PubmedID:16299223) AT3G47340,AT1G05680,AT4G35770,AT3G48360,AT2G33830,AT1G72060,AT1G10070,AT4G37610,AT5G56870,AT3G15630,AT3G57520,AT2G40000,AT1G05340,AT3G28740,AT4G34131,AT4G34135,AT1G09500,AT5G33355,AT3G59930,AT3G30775,AT4G37370,AT2G03760,AT2G36790,AT2G36800,AT1G05560,AT3G01290,AT4G11890,AT1G54740,AT5G20250,AT1G21120,AT1G80160,AT2G05540,AT3G45300,AT2G41730,AT1G22890,AT1G21110,AT5G20230,AT4G20860,AT1G17170,AT1G21400,AT5G49360,AT4G34138,AT1G30720,AT5G19120,AT5G02020,AT2G20670,AT3G15450,AT3G22060,AT1G03090,AT5G17300,AT1G28330,AT3G61060,AT2G29490,AT2G04050,AT5G39610,AT4G01870,AT2G26560,AT4G27450,AT2G32150,AT3G26220,AT5G41080,AT5G49450,AT1G19530,AT1G79700,AT1G76600,AT3G10020,AT5G22920,AT2G19800,AT1G01720,AT2G15890,AT1G08630,AT1G68440,AT5G21170,AT1G25400,AT1G02660,AT2G43820,AT5G57560,AT5G43450,AT3G13450,AT1G58180,AT5G54080,AT4G28040,AT2G02710,AT1G80440,AT2G17880,AT1G76410,AT1G52690,AT1G11260,AT1G27730,AT2G39570,AT1G10140,AT4G26260,AT1G12780,AT5G59310,AT3G14990,AT1G77450,AT5G52760,AT1G23870,AT2G18700,AT2G29460,AT2G30250,AT1G63180,AT5G26340,AT3G49780,AT1G19020,AT1G69890,AT3G15760,AT2G41100,AT1G69490,AT4G03510,AT1G15380,AT1G06570,AT5G63790,AT4G16690,AT3G03470,AT3G60420,AT5G61820,AT1G10340,AT5G18670,AT1G03850,AT3G26210,AT2G44130,AT3G02480,AT5G57910,AT5G40690,AT3G18560,AT5G07440,AT2G47000,AT2G38400,AT4G33150,AT2G36750,AT2G17500,AT5G16340,AT5G16370,AT1G34040,AT1G34060,AT4G27410,AT5G53970,AT5G58650,AT3G62950,AT1G52200,AT1G02640,AT1G62510,AT4G37220,AT1G76590,AT2G15960,AT1G26380,AT1G22190,AT1G21000,AT2G18660,AT2G27830,AT5G39520,AT3G61890,AT3G45730,AT4G39675,AT3G61630,AT1G13990,AT3G04000,AT1G60140,AT1G67920,AT1G07040,AT2G29420,AT5G24470,AT1G54100,AT1G80920,AT5G57655,AT1G10585,AT1G19540,AT3G50480,AT1G67810,AT5G08350,AT5G57220,AT3G29035,AT5G18130,AT1G80840,AT3G13750,AT1G73500,AT1G61340,AT3G04070,AT1G72680,AT5G05410,AT4G33420,AT5G58350,AT2G45170,AT5G04770,AT5G06860,AT2G15880,AT1G22500,AT4G16680,AT1G76680,AT1G76690,AT3G22370,AT2G28400,AT4G29950,AT1G55850,AT1G21100,AT3G26690,AT5G09440,AT4G36040,AT3G07350,AT2G30600,AT3G06420,AT5G23050,AT1G15670,AT2G31945 BLASING_4H-CARBON-FIXCATION_UP Induced-4h-carbon fixcation (Table S 6 PubmedID:16299223) AT1G73600,AT5G04950,AT5G23020,AT4G26780,AT3G44990,AT4G25630,AT3G44750,AT3G58990,AT3G18000,AT5G54970,AT1G64390,AT1G62560,AT1G18590,AT2G27840,AT2G20750,AT3G18600,AT3G06530,AT1G56110,AT1G79140,AT1G68600,AT5G01790,AT4G03060,AT5G42800,AT4G25340,AT5G40480,AT4G01080,AT5G46280,AT2G33210,AT1G80270,AT4G28450,AT4G37800,AT4G04940,AT1G06720,AT1G24020,AT1G44900,AT1G59990,AT2G43100,AT5G40830,AT1G72440,AT3G23810,AT5G55920,AT1G07370,AT3G15460,AT2G46650,AT5G17220,AT5G03350,AT5G08610,AT5G62440,AT5G11790,AT3G11964,AT3G54400,AT3G13230,AT3G52170,AT3G29030,AT1G48570,AT2G21790,AT4G25730,AT4G00600,AT1G64880,AT3G49240,AT2G32220,AT5G13930,AT4G22880,AT4G22870,AT1G29660,AT2G37990,AT5G05990,AT3G10520,AT5G03760,AT5G10390,AT4G39940,AT4G31210,AT1G06000,AT1G31690,AT1G28395,AT2G05140,AT2G37690,AT3G55510,AT3G55010,AT3G27060,AT2G34260,AT3G18130,AT4G30800,AT4G05410,AT4G12880,AT3G52040,AT2G16440,AT2G32990,AT2G19670,AT4G19120,AT5G41670,AT1G48630,AT3G59670,AT5G15740,AT5G61420,AT1G52930,AT3G16780,AT2G03480,AT4G21760,AT4G12030,AT4G02400,AT2G34357,AT3G17390,AT1G69200,AT1G48920,AT5G02050,AT1G77630,AT3G23940,AT1G11545,AT3G51870,AT1G03360,AT5G11240,AT2G40550,AT1G80130,AT5G22650,AT1G67750,AT4G38100,AT1G09200,AT2G35190,AT4G12730,AT3G57150,AT3G05060,AT3G23830,AT5G20160,AT3G13470,AT1G78370,AT5G61790,AT4G02060,AT3G58660,AT1G31230,AT4G10270,AT1G04020,AT1G31660,AT1G16400,AT2G40360,AT5G11740,AT2G22870,AT3G13860,AT3G12610,AT2G27775,AT2G47990,AT4G12600,AT1G07070,AT1G74560,AT3G19370,AT2G18330,AT5G50740,AT5G27390,AT1G26210,AT1G08580,AT4G30650,AT1G04040,AT1G15510,AT5G07690,AT4G02930,AT5G07030,AT3G46940,AT1G29250,AT3G15680,AT5G22880,AT3G57490,AT2G34490,AT5G61020,AT5G60890,AT4G30020,AT3G02650,AT4G39950,AT1G20950,AT3G61820,AT2G31270,AT1G69070,AT3G10530,AT1G55900,AT3G03060,AT4G17770,AT3G06680,AT5G63180,AT3G06035,AT3G12270,AT4G31810,AT1G67120,AT1G61570,AT5G12080,AT4G15210,AT2G35860,AT3G21300,AT1G56050,AT5G49910,AT1G09780,AT3G56070,AT3G56370,AT5G08020,AT5G61770,AT5G61030,AT3G17170,AT1G60850,AT5G27120,AT5G27140,AT5G46580,AT1G24100,AT2G37400 BLASING_4H-LIGHT_DN Repressed-4h-light (Table S 6 PubmedID:16299223) AT3G55500,AT5G07010,AT5G12050,AT4G16780,AT1G80130,AT1G02340,AT4G32280,AT2G28400,AT1G01060,AT1G74670,AT3G09600,AT2G20880,AT4G30290,AT4G15430,AT5G50335,AT4G34770,AT5G28430,AT2G23170,AT3G19850,AT3G16800,AT1G64640,AT1G21830,AT5G60840,AT2G31980,AT2G42870,AT5G60860,AT5G66590,AT4G27260,AT5G48900,AT5G03230,AT5G44260,AT5G60850,AT3G12610,AT3G29370,AT1G56600,AT1G29450,AT5G25190,AT5G04190,AT3G17100,AT5G02580,AT1G29395,AT5G02020,AT3G60530,AT4G28140,AT4G18170,AT5G25460,AT4G23870,AT1G04310,AT5G17300,AT5G65390,AT5G46330,AT5G25350,AT3G49940,AT2G17440,AT3G02380,AT1G11545,AT1G16170,AT4G02380,AT3G07010,AT1G03870,AT1G68110,AT4G03190,AT3G30180,AT5G18060,AT5G18050,AT5G18010,AT5G18030,AT5G13460,AT3G27170,AT3G24520,AT3G54030,AT3G05640,AT5G02760,AT3G58120,AT3G28180,AT3G50740,AT4G02330,AT3G06210,AT5G65010,AT1G27300,AT5G39660,AT1G20450,AT3G55580,AT3G12710,AT4G36780,AT4G25260,AT3G58620,AT1G52190,AT5G15580,AT1G29460,AT1G64660,AT5G39520,AT2G38120,AT1G14920,AT1G29500,AT3G25900,AT4G15680,AT1G14290,AT4G01026,AT3G54920,AT1G33680,AT3G12600,AT5G56140,AT4G14930,AT2G15830,AT3G59060,AT1G18620,AT3G28860,AT2G38170,AT4G13560,AT2G46830,AT1G16850,AT2G47440,AT2G14900,AT4G40060,AT5G18650,AT3G50750,AT2G20210,AT4G39675,AT5G40850,AT3G54510,AT5G28300,AT4G39140,AT3G57800,AT1G07090,AT2G44130,AT1G25230,AT5G39130,AT5G39160,AT5G39190,AT1G01110,AT5G43840,AT2G22330,AT3G16850,AT5G39610,AT5G05750,AT2G22430,AT5G28400,AT1G30250,AT2G42610,AT5G59010,AT5G08130,AT2G27050,AT1G04240,AT5G05690,AT2G06850,AT5G40540,AT3G03840,AT2G47060,AT5G62280,AT1G60190,AT1G76160,AT1G61690,AT3G01490,AT4G17460,AT5G49100,AT5G06980,AT2G26980,AT2G20680,AT2G40970,AT1G75780,AT5G60680,AT3G62090,AT4G33960,AT2G01100,AT1G10020,AT5G05710,AT1G73830,AT5G57550,AT4G37550,AT2G38530,AT1G14280,AT2G39010,AT3G46660,AT2G42580,AT2G41560,AT1G02640,AT5G11890,AT1G71410,AT2G40940,AT5G56100,AT4G15660,AT5G07000,AT5G13100,AT5G12250,AT1G80280,AT3G50900,AT3G07350,AT4G01330,AT5G44250,AT1G69220,AT3G48360,AT1G34760,AT4G10910,AT1G15020,AT3G06590,AT2G28630,AT2G47700,AT5G42680,AT1G15670,AT2G35880,AT5G66400,AT3G02140 BLASING_4H-LIGHT_UP Induced-4h-light (Table S 6 PubmedID:16299223) AT1G05680,AT4G26530,AT3G44860,AT3G44450,AT3G22231,AT1G09500,AT2G41730,AT2G14560,AT2G04050,AT2G36790,AT2G36800,AT1G70820,AT3G22370,AT4G21990,AT4G31870,AT1G02820,AT3G28740,AT5G54610,AT1G21120,AT4G27820,AT1G76520,AT1G21110,AT4G14400,AT1G17170,AT4G16880,AT1G72930,AT1G72910,AT2G15020,AT1G56300,AT2G36750,AT3G28270,AT5G59130,AT1G62510,AT4G12830,AT1G76680,AT1G76690,AT4G10120,AT5G47240,AT2G32290,AT4G04330,AT4G09350,AT2G29490,AT5G38510,AT2G47000,AT3G26290,AT5G24150,AT1G36280,AT4G18440,AT3G01440,AT5G22300,AT3G48460,AT1G57590,AT4G04840,AT1G13650,AT1G22770,AT4G12310,AT4G12320,AT3G52740,AT3G04210,AT5G42250,AT5G62140,AT5G24780,AT3G22240,AT5G54960,AT1G78600,AT4G04610,AT5G24470,AT2G43535,AT2G42530,AT5G59540,AT3G55630,AT1G79410,AT2G01890,AT3G46370,AT4G26260,AT5G19240,AT4G16860,AT5G24660,AT3G28540,AT2G43550,AT2G29350,AT1G75280,AT4G12280,AT4G12290,AT4G04490,AT3G25770,AT3G25760,AT1G76960,AT1G17050,AT5G48880,AT2G32020,AT1G67810,AT2G27420,AT3G26830,AT5G02940,AT2G35960,AT2G23840,AT2G45560,AT3G23410,AT5G16980,AT1G51805,AT5G63780,AT5G44050,AT1G52770,AT1G69523,AT2G03310,AT3G14650,AT2G17500,AT1G22500,AT2G26560,AT3G14690,AT4G20860,AT3G01660,AT4G13800,AT3G11090,AT1G64780,AT1G19670,AT3G10840,AT4G34630,AT3G44990,AT3G16250,AT2G04070,AT1G14230,AT1G14250,AT3G47960,AT1G29720,AT5G39210,AT1G70810,AT1G66540,AT3G49580,AT1G19510,AT3G01550,AT3G61220,AT3G24460,AT5G62480,AT4G16146,AT4G24340,AT4G24350,AT4G33010,AT5G23240,AT5G59670,AT2G46450,AT1G28600,AT4G18240,AT1G65790,AT1G65800,AT2G29320,AT3G05180,AT2G04790,AT2G18660,AT5G36120,AT3G14660,AT4G34610,AT3G11340,AT2G19650,AT1G13470,AT4G37000,AT1G72890,AT4G12980,AT4G26150,AT4G21380,AT2G46430,AT2G46440,AT4G19170,AT3G56710,AT2G40460,AT1G79510,AT2G21970,AT1G72900,AT5G35796,AT1G65190,AT1G65250,AT1G16400,AT5G42760,AT3G09440,AT4G37370,AT4G04500,AT5G50160,AT5G45650,AT5G35735,AT1G78995,AT1G14150,AT4G23260,AT1G32870,AT4G08870,AT4G08900,AT5G23660,AT4G36410,AT2G01870,AT5G10470,AT4G36530,AT5G65870,AT1G74640,AT3G56400,AT4G27030,AT5G58310,AT5G40500,AT5G41050,AT5G20630,AT3G12580,AT1G13930,AT1G43670,AT1G69830,AT4G16870,AT1G64900,AT5G52810,AT1G14870,AT3G50930,AT1G23205,AT1G27480,AT5G04770,AT2G03420 XIN_ABA-WT_UP Induced by ABA in wild-type (Ws) (Table S 1 PubmedID:16258012) AT2G37870,AT4G33550,AT2G33380,AT5G59320,AT2G46680,AT2G42540,AT5G09520,AT1G58270,AT5G59220,AT5G52310,AT5G45950,AT3G22620,AT4G05100,AT1G05340,AT1G62570,AT3G61890,AT3G57010,AT3G22600,AT5G13580,AT2G22930,AT5G41040,AT3G60140,AT2G47780,AT2G41190,AT2G22510,AT5G47330,AT5G23220,AT2G31980,AT1G77450,AT3G05890,AT5G09530,AT5G22500,AT5G02230,AT4G24130,AT4G27410,AT4G36610,AT2G29090,AT3G12500,AT5G15960,AT1G51140,AT5G15180,AT3G50970,AT3G51860,AT3G05640,AT5G22460,AT2G34810,AT3G11410,AT1G68850,AT3G53980,AT1G68570,AT4G17280,AT2G39050,AT4G34000,AT4G24960,AT2G48140,AT1G19970,AT4G10960,AT2G48130,AT5G11110,AT5G59845,AT4G19810,AT4G26080,AT4G26140,AT1G10640,AT1G73390,AT2G22470,AT3G55500,AT1G73480,AT2G23000,AT5G66170,AT1G75030,AT1G14730,AT1G01900,AT3G48460,AT5G22860,AT5G61820,AT3G51895,AT5G07010,AT4G23050,AT5G53120,AT1G02400,AT4G39210,AT3G10340,AT5G14130,AT1G78070,AT5G57040,AT5G57785,AT2G04570,AT2G39800,AT1G20450,AT2G46270,AT2G28400,AT1G74460,AT4G30470,AT1G61890,AT4G17550,AT5G47530,AT1G49430,AT1G56320,AT5G15190,AT4G27570,AT5G62470,AT1G58360,AT4G21650,AT4G27260,AT4G17340,AT1G75900,AT2G39340,AT1G72770,AT2G17500,AT2G04350,AT2G15970,AT2G32800,AT3G48510,AT1G78210,AT1G01470,AT4G37070,AT1G07720,AT3G11420,AT5G37990,AT1G78680,AT1G65690,AT5G06530,AT1G50630,AT3G05880,AT1G08920,AT5G20270,AT5G24090,AT2G28470,AT5G13400,AT3G25830,AT1G67360,AT4G23600,AT5G24140,AT2G23540,AT1G20070,AT5G56540,AT4G28490,AT1G62710,AT5G43850,AT3G62740,AT4G40010,AT3G07390,AT2G39110,AT1G10370,AT2G05540,AT5G38030,AT3G14060,AT5G10930,AT1G61810,AT3G43270,AT3G24500,AT5G57800,AT4G23700,AT1G64970,AT4G00430,AT4G21940,AT3G48350,AT5G47450,AT5G01520,AT4G17030,AT5G20830,AT5G57610,AT2G47180,AT2G41660,AT3G09270,AT1G21410,AT1G13090,AT3G23920,AT1G59740,AT5G09620,AT5G65990,AT3G05030,AT1G09480,AT2G39920,AT1G76790,AT5G12420,AT1G53560,AT1G30700,AT2G41540,AT4G33040,AT4G18650,AT1G52080,AT5G10480,AT4G30960,AT1G08430,AT5G43150,AT1G77000,AT4G17970,AT1G45145,AT1G75170,AT1G28130,AT1G20440,AT1G17745,AT1G01610,AT5G65640,AT3G15350,AT1G56300,AT4G14270,AT3G56080,AT1G08500,AT3G14067,AT2G22920,AT5G54300,AT2G39700,AT3G46670,AT1G22640,AT4G33540,AT4G05020,AT1G26450,AT4G22870,AT2G39330,AT1G52400,AT3G44735,AT2G43530,AT3G25760,AT3G47295,AT5G50100,AT3G22740,AT3G51240,AT1G56580,AT1G62430,AT1G19670,AT5G59480,AT2G16630,AT1G21790,AT3G55290,AT3G23840,AT5G45340,AT5G01870,AT4G24510,AT2G18550,AT5G50720,AT2G43550,AT2G24762,AT5G05270,AT5G27930,AT4G14440,AT4G37560,AT1G21400,AT2G38750,AT4G05590,AT4G37470,AT2G39450,AT5G03080,AT2G21590,AT4G39330,AT1G13930,AT1G09490,AT2G22970,AT2G32810,AT2G39350,AT3G25820,AT3G55310,AT3G55610,AT4G09500,AT4G21640,AT4G27560,AT4G37060,AT5G34780,AT5G66000,AT4G21630 XIN_ABA-WT_DIFF Suppressed by ABA in wild-type (Ws) (Table S 2 PubmedID:16258012) AT2G38310,AT4G11460,AT4G21870,AT5G19890,AT4G21410,AT1G26250,AT1G74670,AT3G06070,AT5G05440,AT1G05250,AT3G50740,AT4G08770,AT3G16150,AT4G39675,AT1G69530,AT4G34770,AT5G61590,AT1G03870,AT1G19530,AT3G01260,AT1G21120,AT4G17870,AT5G59090,AT2G23590,AT4G25990,AT1G08930,AT4G11290,AT5G14130,AT1G02640,AT3G49780,AT5G25810,AT3G10520,AT4G15680,AT5G38940,AT3G23800,AT5G15580,AT3G54040,AT4G15390,AT1G80280,AT1G15040,AT1G05575,AT1G76990,AT1G51850,AT4G00950,AT5G44130,AT4G10120,AT5G20400,AT4G25630,AT5G01050,AT5G07580,AT5G38550,AT2G01900,AT1G13110,AT5G23340,AT3G09940,AT4G19030,AT3G49240,AT4G12730,AT3G51910,AT5G28770,AT1G11580,AT4G18340,AT1G24530,AT4G38550,AT5G14730,AT1G06720,AT1G68840,AT1G66180,AT1G05570,AT2G44380,AT4G30170,AT2G37130,AT3G13730,AT2G46740,AT4G27300,AT4G36670,AT1G52200,AT1G11670,AT5G40450,AT3G45160,AT2G19800,AT4G24780,AT1G78460,AT1G72440,AT1G67110,AT3G54260,AT3G14840,AT5G01210,AT3G11964,AT1G07090,AT5G63140,AT1G15380,AT1G53430,AT5G25460,AT2G30600,AT4G23540,AT1G80830,AT2G24120,AT5G46780,AT5G20250,AT3G02850,AT1G12020,AT3G58660,AT1G52190,AT2G41700,AT4G26010,AT5G08350,AT5G66770,AT3G01860,AT1G22570,AT2G47990,AT3G50560,AT1G14210,AT2G44370,AT1G71400,AT1G54890,AT3G10530,AT1G09460,AT1G05240,AT1G21110,AT1G53440,AT5G01040,AT5G14120,AT5G23350,AT5G38930 XIN_ABA-ROP10-1_UP Induced by ABA in rop10-1 (Table S 3 PubmedID:16258012) AT2G37870,AT4G33550,AT2G33380,AT5G59320,AT2G46680,AT2G42540,AT5G09520,AT1G58270,AT5G59220,AT5G52310,AT5G45950,AT3G22620,AT4G05100,AT1G05340,AT1G62570,AT3G61890,AT3G57010,AT3G22600,AT5G13580,AT2G22930,AT5G41040,AT3G60140,AT2G47780,AT2G41190,AT2G22510,AT5G47330,AT5G23220,AT2G31980,AT1G77450,AT3G05890,AT5G09530,AT5G22500,AT5G02230,AT4G24130,AT4G27410,AT4G36610,AT2G29090,AT3G12500,AT5G15960,AT1G51140,AT5G15180,AT3G50970,AT3G51860,AT3G05640,AT5G22460,AT2G34810,AT3G11410,AT1G68850,AT3G53980,AT1G68570,AT4G17280,AT2G39050,AT4G34000,AT4G24960,AT2G48140,AT1G19970,AT4G10960,AT2G48130,AT5G11110,AT5G59845,AT4G19810,AT4G26080,AT4G26140,AT1G10640,AT1G73390,AT2G22470,AT3G55500,AT1G73480,AT2G23000,AT5G66170,AT1G75030,AT1G14730,AT1G01900,AT3G48460,AT5G22860,AT5G61820,AT3G51895,AT5G07010,AT4G23050,AT5G53120,AT1G02400,AT4G39210,AT3G10340,AT5G14130,AT1G78070,AT5G57040,AT5G57785,AT2G04570,AT2G39800,AT1G20450,AT2G46270,AT2G28400,AT1G74460,AT4G30470,AT1G61890,AT4G17550,AT5G47530,AT1G49430,AT1G56320,AT5G15190,AT4G27570,AT5G62470,AT1G58360,AT4G21650,AT4G27260,AT4G17340,AT1G75900,AT2G39340,AT1G72770,AT2G17500,AT2G04350,AT2G15970,AT2G32800,AT3G48510,AT1G78210,AT1G01470,AT4G37070,AT1G07720,AT3G11420,AT5G37990,AT1G78680,AT1G65690,AT5G06530,AT1G50630,AT3G05880,AT1G08920,AT5G20270,AT5G24090,AT2G28470,AT5G13400,AT3G25830,AT1G67360,AT4G23600,AT5G24140,AT2G23540,AT1G20070,AT5G56540,AT4G28490,AT1G62710,AT5G43850,AT3G62740,AT4G40010,AT3G07390,AT2G39110,AT1G10370,AT2G05540,AT5G38030,AT3G14060,AT5G10930,AT1G61810,AT3G43270,AT3G24500,AT5G57800,AT4G23700,AT1G64970,AT4G00430,AT4G21940,AT3G48350,AT5G47450,AT5G01520,AT4G17030,AT5G20830,AT5G57610,AT2G47180,AT2G41660,AT3G09270,AT1G21410,AT1G13090,AT3G23920,AT1G59740,AT5G09620,AT5G65990,AT3G05030,AT1G09480,AT2G39920,AT1G76790,AT5G12420,AT1G53560,AT1G30700,AT2G41540,AT4G33040,AT4G18650,AT1G52080,AT5G10480,AT4G30960,AT1G08430,AT5G43150,AT1G77000,AT4G17970,AT1G45145,AT1G75170,AT1G28130,AT1G20440,AT1G17745,AT1G01610,AT5G65640,AT3G15350,AT1G56300,AT4G14270,AT3G56080,AT1G08500,AT3G14067,AT2G22920,AT5G54300,AT2G39700,AT3G46670,AT1G22640,AT4G33540,AT4G05020,AT1G26450,AT2G43510,AT5G10760,AT3G57700,AT3G51440,AT4G23800,AT5G39670,AT5G60630,AT4G37370,AT3G28210,AT3G47480,AT2G38760,AT5G24160,AT3G27210,AT3G19580,AT5G01540,AT4G24000,AT2G47630,AT4G34230,AT1G05560,AT2G18660,AT1G01560,AT3G28580,AT3G26460,AT1G26930,AT2G01530,AT3G60420,AT4G04500,AT5G52760,AT5G10380,AT1G54970,AT3G30180,AT5G38020,AT4G11890,AT1G54100,AT4G01070,AT5G46350,AT1G10585,AT3G50770,AT1G66880,AT5G38710,AT2G31880,AT3G26830,AT1G22440,AT2G30360,AT5G57240,AT4G39950,AT4G37410,AT2G46430,AT2G41380,AT2G22500,AT4G28040,AT2G43670,AT4G31550,AT5G19875,AT3G12580,AT2G17040,AT4G26100,AT1G06080,AT2G30550,AT1G72240,AT4G30460,AT1G13340,AT5G18470,AT3G04010,AT5G47070,AT3G28530,AT4G30850,AT4G00700,AT4G36990,AT4G34480,AT5G37540,AT3G01470,AT1G18980,AT1G07870,AT2G31990,AT1G78000,AT2G39980,AT4G24480,AT1G53580,AT4G23880,AT1G17550,AT3G01420,AT3G07720,AT5G63590,AT2G37760,AT1G62660,AT1G78610,AT4G18700,AT1G51780,AT2G38740,AT5G45840,AT5G25610,AT3G04000,AT1G13990,AT2G35380,AT1G30640,AT1G63840,AT5G02420,AT1G67970,AT5G13200,AT3G54390,AT2G29990,AT1G36160,AT5G42050,AT5G45940,AT5G15290,AT5G55400,AT4G16190,AT2G26300,AT3G53400,AT2G33590,AT4G30490,AT3G53230,AT1G09490,AT2G22970,AT2G31890,AT2G32810,AT2G39350,AT2G46440,AT3G25820,AT3G55610,AT4G01370,AT4G09500,AT4G21640,AT4G23810,AT4G26090,AT4G27560,AT4G37060,AT5G39680,AT5G66000,AT4G21630 XIN_ABA-ROP10-1_DIFF Suppressed by ABA in rop10-1 (Table S 4 PubmedID:16258012) AT2G38310,AT4G21870,AT4G11460,AT5G19890,AT1G26250,AT5G05440,AT4G21410,AT4G39675,AT3G06070,AT1G74670,AT3G16150,AT4G17870,AT4G08770,AT1G69530,AT5G61590,AT4G34770,AT5G14130,AT2G23590,AT3G10520,AT1G03870,AT4G15680,AT3G01260,AT4G10120,AT1G05250,AT5G38940,AT5G07580,AT1G19530,AT5G48430,AT5G59090,AT5G25810,AT4G25990,AT4G11290,AT1G22690,AT4G18340,AT1G22570,AT5G44130,AT3G45160,AT1G14210,AT5G49360,AT3G23800,AT1G11580,AT4G15390,AT3G44990,AT3G62930,AT3G19850,AT5G28770,AT4G19030,AT3G23880,AT2G45180,AT1G35140,AT4G37450,AT4G04840,AT1G65390,AT3G49780,AT1G11670,AT1G02640,AT3G50560,AT1G71400,AT3G09940,AT5G44680,AT3G22210,AT5G01050,AT5G40450,AT5G57170,AT2G46740,AT1G23480,AT3G54040,AT4G26150,AT1G33811,AT3G15630,AT2G04795,AT4G24780,AT5G49730,AT4G14630,AT2G19800,AT5G63140,AT1G80280,AT3G54260,AT4G22212,AT5G08350,AT1G76990,AT1G05570,AT3G51910,AT2G33330,AT5G19120,AT1G12020,AT1G08930,AT5G14760,AT5G61130,AT2G10940,AT5G51190,AT3G22240,AT4G38840,AT1G10550,AT4G14690,AT1G76160,AT1G67110,AT4G12730,AT3G50740,AT5G44020,AT3G16690,AT5G23340,AT2G23130,AT5G22580,AT4G00950,AT4G27030,AT3G61640,AT3G14310,AT5G20400,AT4G28250,AT3G13730,AT5G62340,AT5G38550,AT2G01900,AT4G25260,AT5G46780,AT2G41700,AT3G02850,AT1G80640,AT1G05240,AT4G27040,AT5G01040,AT5G14120,AT5G19130,AT5G23350,AT5G38930,AT5G49740 XIN_ABA-WT_NOT-ROP10-1_UP Induced by ABA in wild-type (Ws) but not in rop10-1 (Table S 5 PubmedID:16258012) AT4G22870,AT2G39330,AT1G52400,AT3G44735,AT2G43530,AT3G25760,AT3G47295,AT5G50100,AT3G22740,AT3G51240,AT1G56580,AT1G62430,AT1G19670,AT5G59480,AT2G16630,AT1G21790,AT3G55290,AT3G23840,AT5G45340,AT5G01870,AT4G24510,AT2G18550,AT5G50720,AT2G43550,AT2G24762,AT5G05270,AT5G27930,AT4G14440,AT4G37560,AT1G21400,AT2G38750,AT4G05590,AT4G37470,AT2G39450,AT5G03080,AT2G21590,AT4G39330,AT1G13930,AT3G55310,AT5G34780 XIN_ABA-ROP10-1_NOT-WT_UP Induced by ABA in rop10-1but not in wild-type (Ws) (Table S 6 PubmedID:16258012) AT1G10585,AT3G12580,AT2G18660,AT3G60420,AT4G04500,AT5G52760,AT2G17040,AT5G10760,AT1G01560,AT5G10380,AT4G26100,AT2G01530,AT4G23800,AT1G06080,AT2G30550,AT2G22500,AT1G72240,AT4G30460,AT3G28580,AT3G50770,AT3G47480,AT1G13340,AT1G54970,AT4G34230,AT5G18470,AT3G04010,AT2G38760,AT5G47070,AT3G28530,AT3G26460,AT4G30850,AT4G00700,AT1G66880,AT4G36990,AT4G34480,AT5G37540,AT3G01470,AT5G01540,AT1G26930,AT5G39670,AT1G18980,AT1G07870,AT5G24160,AT2G31990,AT5G38710,AT1G78000,AT3G30180,AT2G39980,AT4G28040,AT5G38020,AT2G43510,AT4G24480,AT1G53580,AT4G23880,AT1G17550,AT2G43670,AT4G11890,AT3G01420,AT3G07720,AT5G63590,AT5G60630,AT2G37760,AT4G24000,AT2G31880,AT1G62660,AT1G78610,AT3G26830,AT4G18700,AT4G31550,AT1G51780,AT2G38740,AT5G45840,AT5G25610,AT3G27210,AT3G04000,AT1G22440,AT2G30360,AT5G57240,AT5G19875,AT1G13990,AT2G35380,AT2G47630,AT1G30640,AT1G63840,AT1G54100,AT4G39950,AT5G02420,AT1G67970,AT4G01070,AT5G13200,AT3G57700,AT4G37370,AT3G54390,AT3G51440,AT5G46350,AT2G29990,AT1G36160,AT3G19580,AT5G42050,AT5G45940,AT1G05560,AT4G37410,AT5G15290,AT2G46430,AT5G55400,AT4G16190,AT2G26300,AT3G53400,AT2G41380,AT3G28210,AT2G33590,AT4G30490,AT3G53230,AT2G31890,AT2G46440,AT4G01370,AT4G23810,AT4G26090,AT5G39680 XIN_ABA-ROP10-1/ABA_UP Higher expression in ABA-treated rop10-1 than in ABA-treated Ws (Table S 7 PubmedID:16258012) AT3G28580,AT3G50930,AT2G32020,AT3G26830,AT5G52750,AT5G27420,AT1G01560,AT5G01540,AT4G23260,AT2G36790,AT3G28210,AT3G22060,AT2G17040,AT1G66880,AT2G41380,AT3G26210,AT5G18470,AT2G04070,AT4G18880,AT5G38900,AT4G37370,AT2G18660,AT5G51440,AT1G19020,AT3G56710,AT2G38470,AT1G21120,AT4G21390,AT1G10170,AT1G55450,AT5G02150,AT1G05575,AT1G24150,AT1G18380,AT2G30250,AT4G38550,AT3G54150,AT3G57550,AT5G14730,AT2G16060,AT1G21110,AT4G01370 XIN_ABA-ROP10-1-WT_DN Commonly activated and repressed by ABA in Ws and rop10-1 (Table S 8 PubmedID:16258012) AT2G37870,AT4G33550,AT2G33380,AT5G59320,AT2G46680,AT2G42540,AT5G09520,AT1G58270,AT5G59220,AT5G52310,AT5G45950,AT3G22620,AT4G05100,AT1G05340,AT1G62570,AT3G61890,AT3G57010,AT3G22600,AT5G13580,AT2G22930,AT5G41040,AT3G60140,AT2G47780,AT2G41190,AT2G22510,AT5G47330,AT5G23220,AT2G31980,AT1G77450,AT3G05890,AT5G09530,AT5G22500,AT5G02230,AT4G24130,AT4G27410,AT4G36610,AT2G29090,AT3G12500,AT5G15960,AT1G51140,AT5G15180,AT3G50970,AT3G51860,AT3G05640,AT5G22460,AT2G34810,AT3G11410,AT1G68850,AT3G53980,AT1G68570,AT4G17280,AT2G39050,AT4G34000,AT4G24960,AT2G48140,AT1G19970,AT4G10960,AT2G48130,AT5G11110,AT5G59845,AT4G19810,AT4G26080,AT4G26140,AT1G10640,AT1G73390,AT2G22470,AT3G55500,AT1G73480,AT2G23000,AT5G66170,AT1G75030,AT1G14730,AT1G01900,AT3G48460,AT5G22860,AT5G61820,AT3G51895,AT5G07010,AT4G23050,AT5G53120,AT1G02400,AT4G39210,AT3G10340,AT5G14130,AT1G78070,AT5G57040,AT5G57785,AT2G04570,AT2G39800,AT1G20450,AT2G46270,AT2G28400,AT1G74460,AT4G30470,AT1G61890,AT4G17550,AT5G47530,AT1G49430,AT1G56320,AT5G15190,AT4G27570,AT5G62470,AT1G58360,AT4G21650,AT4G27260,AT4G17340,AT1G75900,AT2G39340,AT1G72770,AT2G17500,AT2G04350,AT2G15970,AT2G32800,AT3G48510,AT1G78210,AT1G01470,AT4G37070,AT1G07720,AT3G11420,AT5G37990,AT1G78680,AT1G65690,AT5G06530,AT1G50630,AT3G05880,AT1G08920,AT5G20270,AT5G24090,AT2G28470,AT5G13400,AT3G25830,AT1G67360,AT4G23600,AT5G24140,AT2G23540,AT1G20070,AT5G56540,AT4G28490,AT1G62710,AT5G43850,AT3G62740,AT4G40010,AT3G07390,AT2G39110,AT1G10370,AT2G05540,AT5G38030,AT3G14060,AT5G10930,AT1G61810,AT3G43270,AT3G24500,AT5G57800,AT4G23700,AT1G64970,AT4G00430,AT4G21940,AT3G48350,AT5G47450,AT5G01520,AT4G17030,AT5G20830,AT5G57610,AT2G47180,AT2G41660,AT3G09270,AT1G21410,AT1G13090,AT3G23920,AT1G59740,AT5G09620,AT5G65990,AT3G05030,AT1G09480,AT2G39920,AT1G76790,AT5G12420,AT1G53560,AT1G30700,AT2G41540,AT4G33040,AT4G18650,AT1G52080,AT5G10480,AT4G30960,AT1G08430,AT5G43150,AT1G77000,AT4G17970,AT1G45145,AT1G75170,AT1G28130,AT1G20440,AT1G17745,AT1G01610,AT5G65640,AT3G15350,AT1G56300,AT4G14270,AT3G56080,AT1G08500,AT3G14067,AT2G22920,AT5G54300,AT2G39700,AT3G46670,AT1G22640,AT4G33540,AT4G05020,AT1G26450,AT1G09490,AT2G22970,AT2G32810,AT2G39350,AT3G25820,AT3G55610,AT4G09500,AT4G21640,AT4G27560,AT4G37060,AT5G66000,AT4G21630 BROWN_UVR8_HY5_UP Induced regulated by UVR8 and HY5 (Table S2 PubmedID:16330762) AT3G22840,AT4G14690,AT3G51240,AT4G31870,AT5G13930,AT5G44110,AT5G08640,AT5G24120,AT5G02270,AT5G62210,AT5G24850,AT4G15480,AT3G57020,AT3G52740,AT3G55120,AT5G42760,AT3G56290,AT4G37760,AT5G17050,AT5G11260,AT5G56090,AT5G17220,AT5G42800,AT1G78510,AT1G12370,AT4G27030,AT1G06000,AT5G05270,AT5G23730,AT1G06430,AT3G44450,AT1G16260,AT4G27570,AT5G52250,AT4G01660,AT3G17610,AT2G25530,AT1G73650,AT1G23010,AT2G38210,AT1G79270,AT1G03495,AT5G58760,AT4G37150,AT3G14770,AT5G01410,AT2G17270,AT2G41040,AT2G30040,AT3G27380,AT1G17050,AT5G60540,AT3G17800,AT5G19850,AT2G23910,AT5G04830,AT4G37990,AT1G33560,AT5G66760,AT2G25620,AT3G07700,AT1G07510,AT4G03020,AT4G15680,AT5G54960,AT3G14690,AT3G10910,AT3G02140,AT3G52450,AT3G24170,AT4G11600,AT1G78600 BROWN_UV-B_WT_UP Induced by UV-B in wild type (Table S2 PubmedID:16330762) AT3G22840,AT4G14690,AT3G51240,AT4G31870,AT5G13930,AT5G44110,AT5G08640,AT5G24120,AT5G02270,AT5G62210,AT5G24850,AT4G15480,AT3G57020,AT3G52740,AT3G55120,AT5G42760,AT3G56290,AT4G37760,AT5G17050,AT5G11260,AT5G56090,AT5G17220,AT5G42800,AT1G78510,AT1G12370,AT4G27030,AT1G06000,AT5G05270,AT5G23730,AT1G06430,AT3G44450,AT1G16260,AT4G27570,AT5G52250,AT4G01660,AT3G17610,AT2G25530,AT1G73650,AT1G23010 GONZALI_SUCROSE_UP Strongly induced responsive to sucrose when Suc modulated is greater than 3fold (Table S1 PubmedID:16463203) AT2G26440,AT2G23180,AT2G45290,AT2G40840,AT2G33210,AT4G14680,AT4G15210,AT4G17090,AT4G17770,AT4G15620,AT4G15640,AT5G13520,AT5G28540,AT5G20740,AT5G21100,AT5G20080,AT5G28370,AT1G31817,AT5G16990,AT5G17010,AT5G17050,AT5G15980,AT5G15090,AT5G15450,AT1G31660,AT5G14760,AT1G48920,AT5G27330,AT5G27390,AT5G27010,AT5G26860,AT5G67200,AT5G67400,AT5G67020,AT5G66420,AT5G65010,AT5G64670,AT5G64080,AT5G63980,AT5G61030,AT5G60520,AT5G58900,AT5G58500,AT5G57390,AT5G56350,AT5G55450,AT5G55200,AT5G55280,AT5G54770,AT5G54670,AT5G54370,AT5G53420,AT5G52380,AT5G50730,AT5G50740,AT5G49330,AT5G48880,AT5G48300,AT5G48470,AT5G47455,AT5G46740,AT5G46280,AT5G44500,AT5G42650,AT5G42150,AT5G41670,AT5G40850,AT5G40150,AT5G38720,AT5G37970,AT5G24330,AT5G23300,AT5G13930,AT5G12160,AT5G12170,AT5G09870,AT5G08640,AT5G08565,AT5G07240,AT5G05990,AT5G05560,AT5G05270,AT5G03300,AT5G03650,AT5G02590,AT5G02270,AT5G02050,AT5G01260,AT3G63300,AT3G61820,AT3G61250,AT3G58650,AT3G57490,AT3G57150,AT3G56070,AT3G55605,AT3G55510,AT3G55120,AT3G55010,AT3G54640,AT3G53940,AT3G53880,AT3G53560,AT3G52750,AT3G52040,AT3G51240,AT3G50930,AT3G49660,AT3G49240,AT3G48700,AT3G48610,AT3G46940,AT3G46970,AT3G44990,AT3G44750,AT3G44320,AT3G44050,AT4G39980,AT4G39350,AT4G39210,AT4G39510,AT4G37910,AT4G36360,AT4G36010,AT4G35850,AT4G35630,AT4G34950,AT4G34590,AT4G34160,AT4G34200,AT4G33030,AT4G31810,AT4G31890,AT4G31120,AT4G30800,AT4G30650,AT4G30020,AT4G29520,AT4G28950,AT4G28450,AT4G28680,AT4G27900,AT4G26780,AT4G26600,AT4G25630,AT4G24830,AT4G22770,AT4G21990,AT4G21140,AT4G20020,AT4G13890,AT4G12410,AT4G11120,AT4G11010,AT4G10760,AT4G09020,AT4G05400,AT4G05390,AT4G02930,AT4G02330,AT4G01780,AT4G00630,AT1G25510,AT1G17890,AT1G29900,AT1G18250,AT1G18140,AT3G12270,AT1G33390,AT3G14850,AT3G11964,AT3G52370,AT3G52170,AT3G52180,AT3G29320,AT3G18600,AT3G18630,AT3G23940,AT3G23990,AT3G13560,AT3G13470,AT3G14210,AT3G27280,AT3G27230,AT3G23810,AT3G13110,AT3G15020,AT3G15030,AT1G75580,AT1G71850,AT3G25760,AT3G20330,AT3G12860,AT3G26960,AT3G25290,AT3G27570,AT3G21190,AT3G18130,AT3G17840,AT3G21560,AT3G13930,AT3G17990,AT3G18000,AT3G15680,AT3G15650,AT3G23330,AT3G14370,AT3G15460,AT3G22300,AT3G17360,AT3G06035,AT3G02650,AT3G08770,AT3G08640,AT3G09720,AT3G03250,AT3G10050,AT3G05600,AT3G10520,AT3G01410,AT3G10530,AT3G10690,AT3G01800,AT3G07320,AT3G02230,AT3G05470,AT3G01510,AT3G05060,AT3G03770,AT1G13420,AT1G43910,AT1G35290,AT1G55210,AT1G77670,AT1G77550,AT1G29410,AT1G73600,AT1G76650,AT1G53700,AT1G76580,AT1G29980,AT1G78090,AT1G73620,AT1G52930,AT1G63940,AT1G80270,AT1G74030,AT1G69870,AT1G69830,AT2G43550,AT2G41800,AT1G53310,AT1G55900,AT1G32440,AT1G78370,AT1G06000,AT1G53645,AT1G26460,AT1G07370,AT1G32900,AT1G48560,AT1G48570,AT1G48600,AT1G44900,AT1G18850,AT1G28395,AT1G50110,AT1G18320,AT1G15510,AT1G30530,AT1G65060,AT1G80750,AT1G65920,AT1G65900,AT1G22410,AT1G80130,AT1G80170,AT1G59640,AT1G56110,AT1G78060,AT1G70985,AT1G73010,AT1G72940,AT1G21750,AT1G11330,AT1G34340,AT1G15440,AT1G15480,AT1G06550,AT1G10850,AT1G20950,AT1G11600,AT1G11790,AT1G64880,AT1G23410,AT1G24020,AT1G23280,AT2G17630,AT1G78570,AT2G31390,AT2G31380,AT2G24762,AT2G17250,AT2G42610,AT2G21590,AT2G16430,AT2G25270,AT1G04520,AT1G31230,AT2G20585,AT2G46420,AT2G36880,AT2G36870,AT2G04530,AT2G21790,AT2G35860,AT2G42710,AT2G31270,AT1G70270,AT1G03310,AT1G11840,AT1G61800,AT2G25150,AT1G10270,AT2G17670,AT1G65560,AT1G09780,AT1G62180,AT1G24280,AT1G23100,AT1G27050,AT1G51380,AT1G30960,AT2G18210,AT2G15690,AT2G15620,AT2G06050,AT2G28250,AT2G25530,AT2G24390,AT2G32220,AT2G35790,AT2G15000,AT2G25625,AT2G37240,AT2G45030,AT2G28790,AT2G28900,AT2G41230,AT2G38670,AT2G31060,AT2G47990,AT2G14920,AT2G29670,AT2G29690,AT2G19670,AT2G44830,AT2G18900,AT2G39530,AT2G34260,AT2G39220,AT2G34350,AT2G41090,AT2G38160,AT2G37690,AT2G35040,AT2G33790,AT2G32990 GONZALI_SUCROSE_DN Strongly repressed responsive to sucrose when Suc modulated is greater than 3fold (Table S1 PubmedID:16463203) ATCG01110,ATCG01120,ATCG01050,ATCG00670,ATCG00680,ATCG00690,ATCG00270,ATCG00280,ATCG00350,ATCG00500,ATCG00520,ATCG00130,ATCG00020,ATCG00050,AT2G40880,AT2G45210,AT1G67710,AT4G17245,AT4G17730,AT4G15610,AT4G16690,AT4G16000,AT4G16520,AT4G16190,AT4G15690,AT4G15700,AT4G15530,AT4G14540,AT1G25230,AT1G28260,AT1G28330,AT1G73540,AT1G48840,AT1G58032,AT5G19860,AT5G10695,AT5G21170,AT5G20230,AT5G20030,AT5G28430,AT4G37010,AT4G36730,AT4G36670,AT4G37220,AT3G51840,AT1G58180,AT5G16110,AT5G16120,AT5G15850,AT5G14740,AT5G35170,AT5G24800,AT5G66490,AT5G66260,AT5G66250,AT5G65110,AT5G64380,AT5G64410,AT5G63190,AT5G63470,AT5G62280,AT5G61260,AT5G60680,AT5G60850,AT5G59080,AT5G58800,AT5G58650,AT5G57785,AT5G57660,AT5G57655,AT5G56870,AT5G55970,AT5G56100,AT5G54630,AT5G54080,AT5G54280,AT5G53160,AT5G52250,AT5G52120,AT5G51970,AT5G51390,AT5G49450,AT5G49360,AT5G48490,AT5G48110,AT5G47560,AT5G47610,AT5G47240,AT5G47390,AT5G47040,AT5G45310,AT5G45040,AT5G44920,AT5G43580,AT5G39660,AT5G39520,AT5G39080,AT5G37260,AT5G35790,AT5G24490,AT5G23660,AT5G23340,AT5G19120,AT5G18850,AT5G18600,AT5G18650,AT5G18670,AT5G18630,AT5G17300,AT5G16340,AT5G15290,AT5G14410,AT5G14180,AT5G14190,AT5G06690,AT5G06980,AT5G07100,AT5G05710,AT5G05690,AT5G05290,AT5G05140,AT5G04810,AT5G04770,AT5G04040,AT5G03180,AT5G02810,AT5G02840,AT5G02150,AT5G02160,AT5G02020,AT3G62950,AT3G62410,AT3G62550,AT3G61900,AT3G61260,AT3G61060,AT3G61210,AT3G60300,AT3G60130,AT3G60140,AT3G59940,AT3G55890,AT3G56000,AT3G52840,AT3G52070,AT3G52480,AT3G51730,AT3G51910,AT3G49780,AT3G49790,AT3G48530,AT3G48740,AT3G48360,AT3G47340,AT3G47560,AT3G47160,AT3G45300,AT4G38810,AT4G38690,AT4G38700,AT4G38060,AT4G37330,AT4G36040,AT4G35440,AT4G35770,AT4G35750,AT4G34970,AT4G34920,AT4G33660,AT4G33666,AT4G33150,AT4G30690,AT4G29950,AT4G28703,AT4G28270,AT4G28240,AT4G27460,AT4G27450,AT4G26555,AT4G25940,AT4G25170,AT4G20820,AT4G20110,AT4G19160,AT4G19420,AT4G18550,AT4G13830,AT4G13030,AT4G11360,AT4G10910,AT4G10920,AT4G10020,AT4G09460,AT4G05150,AT4G05070,AT4G04040,AT4G01460,AT4G01026,AT4G00750,AT1G32060,AT1G17990,AT1G22190,AT1G07050,AT1G07040,AT1G13670,AT1G13700,AT1G56200,AT1G56220,AT3G12320,AT1G69490,AT1G66760,AT1G72060,AT1G72070,AT1G55000,AT1G75190,AT1G75180,AT3G28740,AT3G20660,AT3G25670,AT3G22210,AT3G21870,AT3G23880,AT3G22460,AT3G13450,AT3G23760,AT3G23700,AT3G14990,ATMG01200,AT3G26510,AT3G26220,AT3G26170,AT3G27350,AT3G29240,AT3G23080,AT3G26740,AT3G17100,AT3G19860,AT3G19390,AT3G21260,AT3G15770,AT3G15760,AT3G16120,AT3G17510,AT3G15450,AT3G16770,AT3G22440,AT3G06080,AT3G06780,AT3G11930,AT3G05950,AT3G10740,AT3G03990,AT3G04000,AT3G03150,AT3G05680,AT3G10450,AT3G10120,AT3G10020,AT3G07350,AT3G07310,AT3G09020,AT3G07650,AT3G11550,AT3G11560,AT1G02340,AT1G19000,AT1G15740,AT1G63180,AT1G71030,AT1G68440,AT1G76590,AT1G76410,AT1G76460,AT1G68010,AT1G29970,AT1G73655,AT1G73260,AT1G71970,AT1G70700,AT1G74670,AT1G68520,AT1G80440,AT1G69360,AT1G68190,AT2G47270,AT2G43400,AT2G43520,AT1G19510,AT1G15010,AT1G49210,AT1G49200,AT1G78290,AT1G21920,AT1G21400,AT1G02660,AT1G21360,AT1G53560,AT1G01240,AT1G17455,AT1G19610,AT1G19660,AT1G12790,AT1G12780,AT1G26800,AT1G26665,AT1G79700,AT1G21100,AT1G01770,AT1G33055,AT1G01170,AT1G49650,AT1G33050,AT1G18330,AT1G18460,AT1G32700,AT1G30520,AT1G11530,AT1G80920,AT1G80160,AT1G80180,AT1G59590,AT1G02860,AT1G74840,AT1G53885,AT1G27590,AT1G72820,AT1G50290,AT1G11260,AT1G21780,AT1G21770,AT1G21680,AT1G13990,AT1G06570,AT1G62763,AT1G16260,AT1G43590,AT1G21000,AT1G13080,AT1G14870,AT1G64720,AT1G75490,AT1G23390,AT1G23870,AT1G03090,AT1G05560,AT1G30720,AT2G38820,AT2G14160,AT2G13360,AT2G04038,AT2G31945,AT2G04690,AT2G24550,AT2G40420,AT2G36950,AT2G36220,AT2G42750,AT2G21185,AT2G03710,AT1G22630,AT1G61820,AT1G70290,AT1G12010,AT2G25080,AT1G10360,AT1G27290,AT1G10150,AT1G77210,AT1G09415,AT1G10070,AT1G30820,AT1G09460,AT1G05340,AT2G17710,AT1G65510,AT1G22890,AT1G08570,AT2G17880,AT1G03610,AT1G03600,AT1G03400,AT2G17450,AT1G23120,AT1G24440,AT1G62620,AT1G51400,AT1G23710,AT2G42890,AT2G18280,AT2G20670,AT2G15890,AT2G15960,AT2G15695,AT2G05540,AT2G15880,AT2G25450,AT2G32150,AT2G24240,AT2G18670,AT2G18700,AT2G45170,AT2G28110,AT2G38870,AT2G02420,AT2G39000,AT2G27830,AT2G29290,AT2G01450,AT2G41250,AT2G07180,AT2G46220,AT2G25900,AT2G34600,AT2G45980,AT2G45740,AT2G39470,AT2G39570,AT2G38400,AT2G38210,AT2G37680,AT2G44010,AT2G44130,AT2G22990,AT2G22980,AT2G40000,AT2G33810,AT2G33830,AT2G02710,AT2G26670 LISTER_ROTENONE-TREATMENT_UP Up-regulated in microarray measurements of changes in transcript abundance after rotenone treatment (Table 2 PubmedID:14730085) AT3G50930,AT1G64220,AT3G04800,AT1G50400,AT1G23100,AT5G55200,AT1G20350,AT3G05780,AT1G06430,AT3G19170,AT5G56090,AT3G57090,AT3G50940,AT1G17530,AT5G26860,AT4G37910,AT3G15352,AT3G08950,AT3G23990,AT5G36950,AT2G33210,AT5G12390,AT2G19080,AT5G09590,AT5G17710,AT1G53030,AT5G50920,AT1G69750,AT3G17910,AT4G33650,AT1G55900,AT5G40930,AT5G49840,AT2G29530,AT2G37410,AT5G62050,AT3G13860,AT2G36070,AT5G17760,AT1G07510 LISTER_ROTENONE-TREATMENT_DN Down-regulated in microarray measurements of changes in transcript abundance after rotenone treatment (Table 2 PubmedID:14730085) AT4G24190,AT3G13470,AT5G11690 ESMON_HYPOCOTYL-FLANK-ETIOLATED-B.OLERACEA-SEEDLING_UP Enhanced expression in the hypocotyl flank of etiolated B. oleracea seedlings farthest from incident phototropic and gravitropic stimulation (Table S1 PubmedID:16371470) AT1G69530,AT2G40610,AT4G25240,AT4G27260,AT4G44760,AT5G15160,AT5G47370,AT5G54510 SCHWAGER_VFB/WT_UP Induced in the vfb mutants compared to the wild type (Table S1 PubmedID:17435085) AT3G28270,AT5G24420,AT3G28220,AT1G02820,AT3G28290,AT1G09500,AT1G52040,AT4G31870,AT2G04040,AT4G36700,AT2G21320,AT2G39330,AT1G12030,AT2G31380,AT5G42760,AT2G27420,AT1G47400,AT5G24150,AT5G36910,AT4G01080,AT1G19670,AT5G46050,AT5G24120,AT5G09570,AT5G20150,AT1G55960,AT2G34810,AT1G65870,AT3G21670,AT3G49580,AT5G64170,AT3G12320,AT1G52000,AT1G64900,AT1G52410,AT1G51820,AT3G44450,AT5G62430,AT1G18710,AT3G28740,AT1G13650,AT4G21910,AT3G26290,AT3G17790,AT4G24700,AT3G56980,AT5G48850,AT1G32900,AT4G23600,AT2G19190,AT5G24160,AT1G18810,AT1G65500,AT5G24780,AT1G14250,AT4G15490,AT3G47500,AT5G67370,AT2G33380,AT3G57020,AT1G31820,AT2G44370,AT1G72920,AT5G24660,AT4G23300,AT5G39520,AT3G24470,AT3G28540,AT1G60590,AT5G04150,AT3G01060,AT3G18250,AT5G48540,AT4G20860,AT1G51890,AT4G16880,AT2G29120,AT1G23205,AT3G47640,AT4G19170,AT1G65480,AT4G23260,AT2G19650,AT3G03470,AT1G66540,AT5G53450,AT1G57770,AT5G01540,AT4G26850,AT5G45820,AT4G02410,AT3G19550,AT4G37310,AT1G52400,AT4G12310,AT1G53090,AT3G61220,AT2G42750,AT4G37150,AT4G23290,AT1G73680,AT5G38780,AT1G70810,AT3G52740,AT1G51790,AT5G61820,AT5G65870,AT1G64170,AT1G56430,AT5G02180,AT5G67330,AT1G04770,AT1G51700,AT1G53870,AT2G37970,AT4G01700,AT2G38870,AT3G48460,AT5G67030,AT3G02240,AT4G15440,AT5G36220,AT3G18000,AT5G05250,AT2G29650,AT5G43745,AT2G23000,AT5G02830,AT1G51860,AT4G16370,AT4G27710,AT1G23020,AT3G15720,AT4G13900,AT1G65490,AT1G66330,AT2G17040,AT1G78290,AT5G59130,AT1G07450,AT3G24190,AT1G06000,AT2G43570,AT4G27820,AT2G39710,AT3G45140,AT3G19000,AT2G46680,AT3G18290,AT3G02480,AT4G23810,AT2G36590,AT5G01820,AT5G10380,AT4G33660,AT1G28610,AT2G25450,AT1G62180,AT1G64980,AT4G20820,AT1G06040,AT1G02220,AT5G02940,AT1G73750,AT3G25410,AT2G23840,AT4G28740,AT1G33055,AT5G20220,AT4G04610,AT1G71040,AT4G08850,AT5G10250,AT1G42540,AT4G35060,AT5G10930,AT4G26790,AT2G27150,AT5G02810,AT1G65860,AT3G46370,AT3G51240,AT4G23990,AT5G15910,AT4G36530,AT1G26560,AT1G70580,AT3G05400,AT5G21100,AT1G16410,AT1G56170,AT5G38510,AT5G65890,AT2G02810,AT5G44120,AT2G31790,AT1G65060,AT3G59140,AT5G62140,AT2G39980,AT5G13740,AT5G49730,AT1G11410,AT4G39675,AT2G15080,AT5G07690,AT4G24450,AT1G35230,AT3G02450,AT5G18040,AT4G24380,AT1G03310,AT5G48030 SCHWAGER_VFB/WT_DN Repressed in the vfb mutants compared to the wild type (Table S2 PubmedID:17435085) AT4G32280,AT5G12050,AT5G62280,AT2G42870,AT3G45860,AT3G50080,AT5G57760,AT3G04210,AT4G16780,AT5G18060,AT5G02760,AT3G59350,AT3G22231,AT1G79700,AT3G21550,AT4G08950,AT2G14560,AT2G16060,AT1G28330,AT4G14400,AT1G78970,AT2G34770,AT2G33570,AT3G15540,AT4G34770,AT3G58120,AT5G37990,AT4G38400,AT1G04240,AT1G43790,AT5G47370,AT1G64360,AT3G06370,AT1G03870,AT4G35320,AT1G21250,AT3G03840,AT5G03260,AT1G64640,AT1G29430,AT4G35350,AT1G65310,AT1G18400,AT5G65390,AT4G37770,AT1G19530,AT1G02640,AT2G42530,AT4G03190,AT3G63440,AT1G14920,AT1G22530,AT3G01670,AT5G48900,AT3G23030,AT5G15160,AT5G15580,AT3G29370,AT1G29500,AT3G28420,AT4G16515,AT4G28720,AT1G73830,AT4G25260,AT1G29440,AT2G06850,AT3G12920,AT3G59900,AT4G30410,AT1G52830,AT3G57795,AT2G21200,AT4G14560,AT2G35880,AT1G52190,AT5G44260,AT5G19530,AT2G15680,AT5G15840,AT1G06850,AT1G14290,AT5G22500,AT3G13980,AT5G06930,AT1G11545,AT2G14580,AT3G20570,AT2G17880,AT1G72360,AT1G15580,AT4G34760,AT2G40750,AT1G14280,AT3G22240,AT3G62660,AT3G54920,AT4G09890,AT1G75500,AT5G02540,AT5G10430,AT2G42040,AT1G49210,AT2G38310,AT3G02170,AT2G47930,AT5G19340,AT5G05500,AT2G39180,AT1G12080,AT2G01420,AT2G33990,AT1G24170,AT3G15630,AT5G47180,AT2G01150,AT4G30650,AT2G14900,AT1G70940,AT4G01330,AT1G74740,AT2G15320,AT5G40730,AT1G79660,AT1G61667,AT2G21050,AT5G66920,AT4G26010,AT5G43890,AT3G50340,AT2G40300,AT3G60260,AT3G42800,AT5G01600,AT1G23080,AT5G62340,AT4G02270,AT5G59010,AT2G19660,AT5G20820,AT5G62860,AT1G36940,AT3G49220,AT3G43190,AT3G23690,AT4G28240,AT5G50335,AT4G36730,AT5G19770,AT2G45050,AT5G66080,AT4G28180,AT5G07000,AT1G62770,AT5G54510,AT1G10550,AT1G80280,AT2G46780,AT4G21870,AT5G66985,AT1G07050,AT1G34760,AT3G49960,AT1G01620,AT5G52900,AT2G28670,AT2G28080,AT2G44080,AT4G36110,AT1G54200,AT1G68810,AT2G45170,AT2G26710,AT1G76090,AT4G16500,AT2G31980,AT5G60860,AT3G62110,AT1G05250,AT1G09570,AT1G52070,AT5G39320,AT3G56710,AT5G23240,AT5G14920,AT5G67400,AT1G80240,AT2G19460,AT3G23730,AT3G12710,AT4G26400,AT5G21170,AT3G54430,AT2G02100,AT2G19590,AT2G22980,AT3G55500,AT2G15830,AT5G45070,AT4G00080,AT3G18200,AT3G25710,AT1G02340,AT4G24540,AT1G61590,AT5G60850,AT3G10120,AT5G47800,AT5G40740,AT5G49170,AT1G21980,AT4G30660,AT5G64410,AT5G01710,AT4G12730,AT1G32190,AT5G66110,AT2G42290,AT2G41110,AT1G06080,AT2G32450 SCHWAGER_VFB-CSN4/WT_UP Induced in the vfb mutants and in the csn4 mutant seedlings compared to the wild type (Table S3 PubmedID:17435085) AT1G09500,AT4G31870,AT2G04040,AT4G36700,AT2G31380,AT5G42760,AT5G46050,AT5G09570,AT1G64900,AT3G44450,AT3G26290,AT2G19190,AT1G65500,AT4G15490,AT3G57020,AT1G31820,AT4G23300,AT5G39520,AT5G48540,AT2G29120,AT4G23260,AT1G66540,AT5G53450,AT1G57770,AT5G01540,AT4G37310,AT1G53090,AT3G61220,AT4G37150,AT4G23290,AT5G38780,AT3G52740,AT1G51790,AT5G61820,AT5G65870,AT1G51700,AT2G37970,AT4G13900,AT2G17040,AT1G78290,AT3G24190,AT1G06000,AT2G43570,AT3G02480,AT4G23810,AT5G10380,AT4G33660,AT3G25410,AT1G33055,AT5G20220,AT1G71040,AT2G27150,AT3G51240,AT5G15910,AT1G26560,AT5G44120,AT1G65060,AT1G35230,AT5G18040,AT5G48030 SCHWAGER_VFB-CSN4/WT_DN Repressed in the vfb mutants and in the csn4 mutant seedlings compared to the wild type (Table S4 PubmedID:17435085) AT4G32280,AT5G62280,AT2G42870,AT5G57760,AT3G04210,AT5G18060,AT5G02760,AT3G59350,AT1G79700,AT3G21550,AT1G28330,AT1G78970,AT2G34770,AT2G33570,AT3G15540,AT4G34770,AT3G58120,AT5G37990,AT1G04240,AT1G43790,AT5G47370,AT1G64360,AT1G03870,AT4G35320,AT3G03840,AT5G03260,AT1G64640,AT1G29430,AT4G35350,AT1G19530,AT1G02640,AT2G42530,AT4G03190,AT3G63440,AT1G14920,AT3G01670,AT5G48900,AT3G23030,AT5G15160,AT5G15580,AT1G29500,AT4G16515,AT4G25260,AT1G29440,AT2G06850,AT4G30410,AT3G57795,AT4G14560,AT2G35880,AT1G52190,AT5G44260,AT5G19530,AT2G15680,AT1G06850,AT1G14290,AT5G22500,AT3G13980,AT1G11545,AT3G20570,AT2G17880,AT1G15580,AT4G34760,AT1G14280,AT3G62660,AT4G09890,AT1G75500,AT5G02540,AT2G42040,AT2G47930,AT1G12080,AT2G01420,AT2G33990,AT3G15630,AT4G30650,AT2G14900,AT1G70940,AT4G01330,AT1G74740,AT2G15320,AT1G79660,AT2G21050,AT5G66920,AT3G60260,AT1G23080,AT1G36940,AT3G49220,AT3G23690,AT5G19770,AT5G66080,AT5G54510,AT1G80280,AT2G46780,AT4G21870,AT1G07050,AT1G34760,AT1G01620,AT5G52900,AT2G28080,AT1G68810,AT2G26710,AT1G76090,AT5G60860,AT3G62110,AT1G05250,AT5G39320,AT2G19460,AT3G12710,AT5G21170,AT3G54430,AT2G22980,AT3G25710,AT1G02340,AT5G60850,AT3G10120,AT5G47800,AT5G49170,AT5G64410,AT1G06080,AT2G32450 SCHWAGER_4VFB/WT_DN Repressed in vfb1-1 vfb2-1 vfb3-1 vfb4 (RNAi) Mutants (vfb Mutants) Compared with the Wild Type. Those are Auxin Signaling and Response Genes and Cell Wall Metabolic Genes. (Table 1 PubmedID:17435085) AT4G32280,AT3G15540,AT1G04240,AT3G23030,AT1G52830,AT4G14560,AT1G15580,AT5G18060,AT4G34770,AT3G03840,AT1G29430,AT1G29500,AT1G29440,AT2G21200,AT4G34760,AT5G20820,AT5G54510,AT4G36110,AT2G01420,AT1G70940,AT1G23080,AT1G03870,AT1G65310,AT5G65390,AT1G02640,AT5G48900,AT4G25260,AT2G06850,AT1G11545,AT3G62660,AT3G54920,AT5G10430,AT1G24170,AT5G62340,AT3G49220,AT1G62770,AT1G10550,AT1G80280,AT2G28080,AT3G62110,AT1G52070 THIBAUD-NISSEN_SALICYLIC-ACID(SA)_UP Genes within 3 kb of a putative TGA2-binding site and upregulated by salicylic acid (SA) (Table 2 PubmedID:16824183) AT1G02450,AT1G02440,AT5G51830,AT1G76600,AT2G14610,AT2G46270,AT2G05940 THIBAUD-NISSEN_SA/MOCK4_UP Up-rugulated-SA/Mock4 (Table S2 PubmedID:16824183) AT1G02450,AT2G14610,AT5G51830,AT1G02440,AT1G76600,AT2G46270,AT5G66920,AT2G40000,AT1G03220,AT2G14620,AT1G56510,AT2G05940,AT2G44980,AT3G50850,AT3G13222,AT5G54150,AT1G44110,AT5G45340,AT5G22450,AT2G44990,AT4G31500,AT5G13760,AT1G12460,AT5G51990,AT1G69150,AT3G18540,AT2G28650,AT4G08560,AT3G25185,AT5G04390,AT5G67040,AT3G13820,AT5G05250,AT1G03250 THIBAUD-NISSEN_SA/MOCK4_DN Down-rugulated-SA/Mock4 (Table S2 PubmedID:16824183) AT5G25070,AT4G24380,AT5G66770,AT5G25080,AT3G12690,AT3G27325,AT3G53020,AT4G24370,AT3G50860,AT3G12700,AT3G11800,AT4G18020,AT4G32020,AT2G28640,AT3G25180,AT3G11780,AT1G21680,AT5G61990,AT3G04260,AT2G39990,AT3G53400,AT3G09470,AT3G53030,AT5G54540,AT5G51820,AT4G00370,AT3G13810,AT1G79630,AT3G47730,AT3G52060,AT3G52070 THIBAUD-NISSEN_ATH_P1_UP Up-rugulated-atH_P1 (Table S2 PubmedID:16824183) AT2G14610,AT2G14620,AT5G64810,AT5G54540,AT5G54550,AT1G02440,AT1G02450,AT4G31500,AT5G22450,AT3G18530,AT3G18540,AT3G04260,AT3G50850,AT3G50860,AT5G51990,AT3G11780,AT3G11800,AT3G11810,AT5G66770,AT4G00370,AT4G00380,AT5G25070,AT5G25080,AT1G76600,AT1G21680,AT1G12460,AT1G03220,AT1G03230,AT1G03240,AT1G03250,AT3G53020,AT3G53030,AT5G51820,AT5G51830,AT5G13760,AT4G24370,AT4G24380,AT4G34060,AT4G32020,AT3G52060,AT3G52070,AT5G66910,AT5G66920,AT2G39990,AT2G40000,AT2G44980,AT2G44990,AT2G46270,AT3G53400,AT3G47710,AT3G47720,AT3G47730,AT1G79630,AT5G05240,AT5G05250,AT3G13222 THIBAUD-NISSEN_ATH_WG1_UP Up-rugulated-atH_WG1 (Table S2 PubmedID:16824183) AT4G00370,AT4G00380,AT2G44980,AT2G44990,AT3G09450,AT3G09470,AT3G11780,AT3G11800,AT3G11810,AT2G46270,AT2G39990,AT2G40000,AT3G13810,AT3G13820,AT3G04260,AT3G13222,AT3G13224,AT3G18530,AT3G18540,AT3G12690,AT3G12700,AT4G08550,AT4G08555,AT4G08560,AT3G47710,AT3G47720,AT3G47730,AT3G53020,AT3G53030,AT3G27325,AT1G69150,AT3G52060,AT3G52070,AT5G67040,AT1G02440,AT1G02450,AT1G44110,AT1G79630,AT3G50850,AT3G50860,AT1G56510,AT5G66770,AT1G03220,AT1G03230,AT1G03240,AT1G03250,AT5G61990,AT1G21680,AT5G25070,AT5G25080,AT5G04390,AT1G76600,AT5G45340,AT2G05940,AT5G54540,AT5G54550,AT5G51990,AT5G54145,AT5G54150,AT5G51820,AT5G51830,AT5G22450,AT2G28640,AT2G28650,AT4G31500,AT5G64810,AT3G25180,AT3G25185,AT2G14610,AT2G14620 KOLBE_DTT_UP Up-regulated at least two-fold in both replicate experiments with DTT. (Table S2 PubmedID:16648214) AT4G34630,AT5G64510,AT4G29520,AT1G14360,AT5G61790,AT5G42020,AT3G24090,AT2G02810,AT5G03160,AT1G77510,AT5G22290,AT5G07340,AT3G62600,AT2G44660,AT5G52750 KOLBE_DTT_DN Down-regulated at least two-fold in both replicate experiments with DTT. (Table S2 PubmedID:16648214) AT2G02990,AT1G04770,AT2G32860,AT2G47550,AT4G15610,AT5G24660,AT1G68290,AT4G05110,AT5G25450,AT2G47260,AT5G10820,AT4G04610,AT1G51620,AT5G47330,AT5G59580,AT3G16370,AT3G47380,AT2G38010,AT5G16970,AT3G54420,AT4G37990,AT1G74010,AT1G22830,AT5G12420,AT5G11410,AT2G16630,AT3G20570,AT5G41800,AT2G43510 KOLBE_REDOX_FEEDING_5MM-DTT-1H_UP Up-regulated genes that encode for proteins involved in redox regulation with changed expression after feeding 5 mM DTT for 1 h (Table 2 PubmedID:16648214) AT1G77510,AT1G04980,AT1G21750,AT3G62950,AT3G19010,AT1G03850,AT3G54960,AT3G08710,AT4G15660 SATO_COL-101C_COL-NDR1_101C-NDR1_NDR1-NDR1BLIND_UP Up-regulated by Col_101C, Col_ndr1, 101C_ndr1,and ndr1_ndr1blind (Table S3 PubmedID:17181774) AT1G02140,AT1G02450,AT1G03220,AT1G03850,AT1G03870,AT1G04410,AT1G05010,AT1G05340,AT1G05570,AT1G05680,AT1G08050,AT1G08510,AT1G08720,AT1G08830,AT1G08930,AT1G09070,AT1G09130,AT1G09200,AT1G09350,AT1G09500,AT1G09970,AT1G10070,AT1G10170,AT1G10585,AT1G10940,AT1G10950,AT1G11050,AT1G11260,AT1G11310,AT1G11580,AT1G11650,AT1G12110,AT1G12240,AT1G12520,AT1G13320,AT1G14870,AT1G14980,AT1G15210,AT1G15380,AT1G15670,AT1G17020,AT1G17420,AT1G18350,AT1G19150,AT1G19250,AT1G19670,AT1G19850,AT1G20200,AT1G20440,AT1G21100,AT1G21240,AT1G21250,AT1G21610,AT1G21750,AT1G22360,AT1G23040,AT1G24100,AT1G25490,AT1G26380,AT1G27100,AT1G27130,AT1G27730,AT1G28480,AT1G29950,AT1G30040,AT1G30400,AT1G30490,AT1G32210,AT1G33960,AT1G35230,AT1G35670,AT1G43160,AT1G44350,AT1G45145,AT1G47830,AT1G48930,AT1G50500,AT1G51660,AT1G51680,AT1G53840,AT1G54010,AT1G55020,AT1G56650,AT1G59870,AT1G61560,AT1G61810,AT1G62300,AT1G62480,AT1G62570,AT1G62660,AT1G64280,AT1G64710,AT1G64980,AT1G65500,AT1G66340,AT1G67350,AT1G67360,AT1G68620,AT1G68840,AT1G69490,AT1G70290,AT1G70410,AT1G71030,AT1G71880,AT1G72610,AT1G72710,AT1G72930,AT1G74020,AT1G74710,AT1G75040,AT1G75950,AT1G76490,AT1G76850,AT1G76960,AT1G77510,AT1G77760,AT1G78080,AT1G78670,AT1G78900,AT1G79550,AT1G80040,AT1G80460,AT1G80590,AT1G80830,AT1G80840,AT2G01450,AT2G01970,AT2G02100,AT2G02930,AT2G02990,AT2G03470,AT2G03680,AT2G03760,AT2G04160,AT2G04400,AT2G04700,AT2G04890,AT2G05910,AT2G05940,AT2G06050,AT2G06850,AT2G13810,AT2G14290,AT2G14560,AT2G14610,AT2G14620,AT2G15390,AT2G15970,AT2G16510,AT2G17120,AT2G17390,AT2G17410,AT2G17450,AT2G17500,AT2G18210,AT2G18660,AT2G18680,AT2G18690,AT2G18960,AT2G19190,AT2G19310,AT2G19790,AT2G20790,AT2G21660,AT2G21900,AT2G22330,AT2G22500,AT2G22690,AT2G22860,AT2G23090,AT2G23150,AT2G23450,AT2G23460,AT2G24200,AT2G24210,AT2G25110,AT2G25450,AT2G25670,AT2G25900,AT2G26190,AT2G26690,AT2G27860,AT2G28190,AT2G28210,AT2G28305,AT2G28400,AT2G28510,AT2G28910,AT2G29080,AT2G29350,AT2G29420,AT2G29450,AT2G29460,AT2G29490,AT2G29500,AT2G29720,AT2G29980,AT2G30250,AT2G30490,AT2G30550,AT2G30770,AT2G30930,AT2G31380,AT2G31400,AT2G31890,AT2G32150,AT2G32680,AT2G33150,AT2G33220,AT2G33380,AT2G33830,AT2G34250,AT2G34810,AT2G35000,AT2G36530,AT2G36690,AT2G36880,AT2G36950,AT2G37040,AT2G37130,AT2G37190,AT2G37760,AT2G37770,AT2G37970,AT2G38210,AT2G38360,AT2G38470,AT2G38530,AT2G38540,AT2G38870,AT2G39110,AT2G39200,AT2G39710,AT2G39980,AT2G40000,AT2G40100,AT2G40140,AT2G40750,AT2G41090,AT2G41180,AT2G41230,AT2G41410,AT2G41940,AT2G42360,AT2G43210,AT2G43290,AT2G43510,AT2G43540,AT2G43570,AT2G43620,AT2G43710,AT2G43945,AT2G44490,AT2G45170,AT2G45570,AT2G45760,AT2G46170,AT2G46650,AT2G46680,AT2G47170,AT2G47180,AT2G47470,AT2G47800,AT3G01080,AT3G01120,AT3G01150,AT3G02450,AT3G02520,AT3G02875,AT3G04720,AT3G04940,AT3G05200,AT3G06490,AT3G09010,AT3G09440,AT3G10520,AT3G11020,AT3G11340,AT3G11410,AT3G11820,AT3G12390,AT3G12580,AT3G13460,AT3G13790,AT3G13950,AT3G15210,AT3G16330,AT3G16370,AT3G16470,AT3G16770,AT3G16860,AT3G18050,AT3G19760,AT3G19930,AT3G20970,AT3G22170,AT3G22370,AT3G22440,AT3G23030,AT3G23050,AT3G23120,AT3G25010,AT3G25250,AT3G26740,AT3G26830,AT3G27690,AT3G28210,AT3G28270,AT3G28510,AT3G28540,AT3G28930,AT3G30775,AT3G44880,AT3G46230,AT3G46660,AT3G46820,AT3G47420,AT3G47800,AT3G47960,AT3G48070,AT3G48090,AT3G48890,AT3G49120,AT3G50060,AT3G50970,AT3G51330,AT3G51370,AT3G51730,AT3G51860,AT3G51895,AT3G52400,AT3G52430,AT3G53110,AT3G54150,AT3G54420,AT3G54480,AT3G54840,AT3G54860,AT3G54920,AT3G56400,AT3G57020,AT3G57240,AT3G57260,AT3G59100,AT3G59380,AT3G59930,AT3G60140,AT3G61440,AT3G62780,AT4G00110,AT4G00430,AT4G00700,AT4G01100,AT4G01250,AT4G01370,AT4G01700,AT4G02080,AT4G02330,AT4G02380,AT4G02580,AT4G03510,AT4G03520,AT4G03550,AT4G04210,AT4G04490,AT4G04500,AT4G04610,AT4G08870,AT4G08950,AT4G10500,AT4G10840,AT4G11110,AT4G11360,AT4G11840,AT4G12470,AT4G12480,AT4G13250,AT4G13510,AT4G13770,AT4G13790,AT4G13830,AT4G14340,AT4G14365,AT4G14400,AT4G14630,AT4G14680,AT4G15475,AT4G15490,AT4G15550,AT4G15610,AT4G16890,AT4G17470,AT4G17500,AT4G17550,AT4G17640,AT4G18800,AT4G19040,AT4G19230,AT4G20110,AT4G20150,AT4G20300,AT4G20780,AT4G21160,AT4G21680,AT4G21830,AT4G22470,AT4G22750,AT4G22920,AT4G23100,AT4G23140,AT4G23150,AT4G23180,AT4G23400,AT4G23550,AT4G23600,AT4G23630,AT4G23810,AT4G24000,AT4G24290,AT4G24340,AT4G24350,AT4G24370,AT4G25030,AT4G25130,AT4G25200,AT4G25480,AT4G25490,AT4G25630,AT4G25810,AT4G25900,AT4G26400,AT4G26410,AT4G26570,AT4G26900,AT4G27070,AT4G27280,AT4G27410,AT4G27570,AT4G30210,AT4G31500,AT4G31720,AT4G31800,AT4G31950,AT4G31970,AT4G32530,AT4G32930,AT4G33050,AT4G33540,AT4G34200,AT4G34230,AT4G34700,AT4G35180,AT4G35260,AT4G35770,AT4G36040,AT4G36220,AT4G36670,AT4G36690,AT4G36900,AT4G36990,AT4G37000,AT4G37310,AT4G37370,AT4G37430,AT4G37450,AT4G37470,AT4G37800,AT4G37830,AT4G37990,AT4G38060,AT4G38250,AT4G38540,AT4G38920,AT4G39030,AT4G39080,AT4G39330,AT4G39640,AT4G39670,AT4G39830,AT4G39950,AT4G40030,AT5G01600,AT5G01820,AT5G02120,AT5G02490,AT5G04340,AT5G04590,AT5G05010,AT5G06320,AT5G06860,AT5G06870,AT5G07440,AT5G07690,AT5G08240,AT5G10450,AT5G12020,AT5G12030,AT5G12250,AT5G13320,AT5G13490,AT5G13930,AT5G14060,AT5G15350,AT5G15410,AT5G15610,AT5G16080,AT5G17450,AT5G19110,AT5G19890,AT5G20030,AT5G20230,AT5G21105,AT5G22300,AT5G22570,AT5G23340,AT5G24150,AT5G24160,AT5G24780,AT5G25610,AT5G25910,AT5G26210,AT5G26920,AT5G27380,AT5G28040,AT5G28540,AT5G35590,AT5G38470,AT5G39670,AT5G41950,AT5G42650,AT5G42790,AT5G43320,AT5G43940,AT5G44070,AT5G44420,AT5G46050,AT5G47120,AT5G47220,AT5G47230,AT5G48485,AT5G48570,AT5G50200,AT5G52310,AT5G52510,AT5G52640,AT5G52760,AT5G53000,AT5G54250,AT5G54470,AT5G54810,AT5G57220,AT5G57560,AT5G58290,AT5G58600,AT5G58670,AT5G58940,AT5G59720,AT5G60390,AT5G60800,AT5G60850,AT5G60890,AT5G61790,AT5G63400,AT5G64000,AT5G64120,AT5G65360,AT5G65730,AT5G66055,AT5G66510,AT5G66760,AT5G67310,spikinG1,spikinG2,spikinG3,spikinG4,spikinG5 MARUYAMA-NAKASHITA_SUL-SLIM1_UP Up-regulated by Sulfur and SLIM1 (Table S1 PubmedID:17114350) AT2G44460,AT3G49580,AT4G08620,AT5G48850,AT5G26220,AT3G05400,AT3G08860,AT4G31330,AT5G37980,AT1G18870,AT1G75280,AT1G56410,AT5G48180,AT3G12520,AT4G25220,AT1G36370,AT5G23050,AT1G04770,AT1G78000,AT1G64170,AT5G37940,AT5G38000,AT5G37990,AT1G12200,AT4G33960,AT3G15990,AT1G08920,AT5G40670,AT4G25790,AT2G17640,AT3G47960,AT5G48000,AT5G27350,AT5G05500,AT4G33730,AT3G60280,AT1G62980,AT5G44920,AT5G22410,AT4G24140,AT5G54390,AT5G24090,AT5G38940,AT5G38930,AT5G54850,AT5G25820,AT1G07040,AT5G02800,AT3G02630,AT1G62570,AT4G00520,AT3G10720,AT4G28370,AT3G04090 MARUYAMA-NAKASHITA_SUL-SLIM1_DN Down-regulated by Sulfur and SLIM1 (Table S1 PubmedID:17114350) AT2G18910,AT3G21580,AT4G09020,AT5G60210,AT4G24770,AT5G41190,AT5G60890,AT2G45830,AT2G02020,AT3G20470,AT3G01260,ATMG00920,AT2G07678,AT5G23350,AT5G23360,AT3G56040,AT4G13430,ATCG00870,ATCG01270,AT4G31500,AT4G25100,AT4G39940,AT1G78370,AT5G43780,AT4G01430,AT4G39950,AT2G22330,AT5G23020,AT5G23010,AT3G19710 BAE_NEP1_30MIN_UP Up-regulated by 30 min treatment with 10 mg/ml Nep1 (Table S1 PubmedID:16698904) AT1G35210,AT1G27730,AT2G37430,AT3G10930,AT4G25470,AT2G22880,AT5G28610,AT5G54720,AT5G09800,AT3G19580,AT1G32640,AT5G10210,AT5G44060,AT5G40910,AT5G37550,AT1G73080,AT1G76690,AT4G11280,AT4G26200,AT4G37770,AT1G20510,AT5G16200,AT3G50930,AT3G28580,AT2G46620,AT1G43910,AT4G22780,AT3G23630,AT3G25780,AT3G09020,AT1G14540,AT1G14480,AT2G24600,AT5G45110,AT1G21910,AT1G44830,AT4G34410,AT5G51190,AT1G33760,AT1G19210,AT1G77640,AT3G50260,AT5G64310,AT4G09030,AT2G22470,AT1G35230,AT5G58680,AT4G36030,AT3G59080,AT3G21070,AT3G09870,AT5G35735,AT3G12830,AT1G56150,AT3G23920,AT2G45760,AT3G61190,AT4G34150,AT5G39670,AT1G76650,AT4G27280,AT5G54490,AT4G20780,AT5G66210,AT3G57530,AT1G27770,AT3G22910,AT3G25600,AT2G26190,AT4G33050,AT1G73805,AT1G73800,AT5G26920,AT5G42380,AT3G01830,AT1G66400,AT2G30360,AT3G44260,AT5G22250,AT3G43250,AT1G02360,AT1G71697,AT1G80820,AT5G14700,AT5G61900,AT5G18470,AT1G78860,AT2G46440,AT3G60550,AT2G45080,AT5G45340,AT4G22710,AT3G48520,AT5G57220,AT2G04500,AT4G30530,AT1G20450,AT3G50970,AT5G25910,AT2G34930,AT1G71400,AT1G15890,AT2G32140,AT1G57630,AT1G65400,AT1G65390,AT1G72950,AT1G66090,AT1G72900,AT1G72920,AT1G72940,AT1G72930,AT5G58120,AT5G41550,AT3G44400,AT5G22690,AT1G31540,AT1G56510,AT5G46470,AT5G41740,AT3G44630,AT1G68840,AT1G51700,AT4G25490,AT5G05410,AT4G02200,AT3G54150,AT1G55450,AT1G28370,AT5G47220,AT3G15210,AT5G47230,AT1G53170,AT5G61600,AT4G17500,AT2G44840,AT4G17490,AT3G23240,AT2G31230,AT3G23230,AT5G44350,AT3G09520,AT5G59730,AT1G07000,AT5G58430,AT2G31990,AT3G45960,AT2G18210,AT5G12340,AT1G05575,AT1G76210,AT5G64870,AT5G45630,AT4G27652,AT4G29780,AT4G27654,AT4G39670,AT5G62520,AT5G17350,AT5G44810,AT5G46295,AT3G55840,AT4G28085,AT1G56060,AT1G15010,AT2G26530,AT5G64905,AT2G25460,AT5G65300,AT1G58420,AT3G21520,AT4G27657,AT1G59590,AT5G08240,AT4G24110,AT2G41800,AT4G24380,AT2G28400,AT2G01300,AT4G36500,AT5G66650,AT1G19180,AT1G20520,AT5G19240,AT5G05300,AT3G23170,AT2G36220,AT1G18740,AT5G22530,AT1G19020,AT2G39650,AT1G70420,AT1G73010,AT5G10695,AT2G25735,AT5G38700,AT5G03210,AT2G41640,AT2G20145,AT1G74450,AT4G37290,AT1G63720,AT5G40460,AT3G27210,AT1G56660,AT2G40000,AT1G32920,AT1G69890,AT2G38790,AT1G17380,AT1G74440,AT2G31945,AT2G23270,AT1G76070,AT5G13190,AT1G28190,AT1G50740,AT3G59900,AT3G57450,AT1G72240,AT3G47210,AT4G32020,AT1G20310,AT1G23710,AT2G18690,AT2G44080,AT1G25400,AT5G39785,AT2G12400,AT1G76600,AT2G19710,AT5G39780,AT3G19970,AT3G54200,AT5G41100,AT1G13340,AT1G77500,AT2G37940,AT5G13220,AT3G15760,AT1G10585,orf262,AT2G24550,AT2G32190,AT2G32210,AT5G25260,AT1G14870,AT1G14040,AT4G34390,AT1G26380,AT4G20830,AT1G61340,AT5G26030,AT1G67810,AT5G43890,AT1G24150,AT1G59910,AT3G28340,AT4G39640,AT2G32030,AT2G32020,AT1G02400,AT2G02010,AT1G09940,AT1G28480,AT3G28850,AT1G69920,AT1G69930,AT3G04640,AT5G28630,AT1G07135,AT2G35710,AT2G35715,AT2G43610,AT1G61820,AT4G18340,AT1G67880,AT3G50760,AT2G28080,AT5G13200,AT5G59490,AT1G13210,AT5G02230,AT3G25610,AT3G52470,AT5G06320,AT2G27080,AT4G36990,AT5G62020,AT4G18880,AT5G52760,AT5G52750,AT5G60800,AT5G03380,AT4G24160,AT5G49280,AT5G57510,AT4G28460,AT5G64450,AT5G22680,AT1G52460,AT3G02840,AT1G01470,AT5G06740,AT4G02410,AT5G01540,AT5G65600,AT5G25930,AT1G53440,AT2G31880,AT5G66640,AT1G30370,AT4G16820,AT1G17420,AT1G72520,AT1G61890,AT1G11670,AT5G52050,AT1G24140,AT1G70170,AT4G21850,AT4G21830,AT4G39320,AT4G24570,AT2G22500,AT1G51660,AT1G73500,AT1G01560,AT3G45640,AT3G09940,AT4G38420,AT1G73540,AT4G12720,AT3G50060,AT3G23250,AT1G18570,AT2G17660,AT1G52890,AT3G49530,AT5G18270,AT3G20590,AT5G63130,AT1G21120,AT1G21110,AT1G21100,AT4G36010,AT1G31290,AT1G02810,AT5G62150,AT1G35140,AT2G01180,AT4G01950,AT3G52430,AT5G44070,AT3G16860,AT5G02200,AT5G22630,AT3G44720,AT5G12880,AT1G14370,AT3G25250,AT2G30040,AT5G39020,AT5G67080,AT1G70740,AT3G46930,AT1G67470,AT1G11050,AT4G23220,AT2G33580,AT2G34650,AT5G47850,AT5G35580,AT5G40540,AT3G09830,AT2G05940,AT5G47070,AT4G33920,AT1G07160,AT3G62260,AT4G28400,AT2G30020,AT3G45650,AT3G48650,AT1G19770,AT1G57990,AT5G47960,AT4G39890,AT4G23180,AT5G47910,AT4G17230,AT2G17840,AT4G30430,AT2G23810,AT3G08720,AT1G66880,AT2G47060,AT1G61560,AT3G56710,AT4G21390,AT1G61360,AT1G61370,AT2G23680,AT3G11820,AT3G52400,AT5G37770,AT5G46910,AT1G09950,AT4G22590,AT3G04320,AT5G24590,AT3G02800,AT3G26970,AT3G26980,AT2G35930,AT3G11840,AT3G18710,AT5G64660,AT3G52450,AT1G66160,AT4G37710,AT2G41010,AT1G68450,AT3G18690,AT3G56880,AT5G46780,AT1G64610,AT5G58750,AT2G46400,AT1G80840,AT2G38470,AT4G23810,AT5G13080,AT4G31800,AT5G49520,AT5G15130,AT3G56400,AT4G30290,AT4G30280,AT1G65310,AT3G28210,AT3G52800,AT5G04340,AT5G59820,AT1G66500,AT1G20823,AT5G27420,AT5G59550,AT3G46620,AT4G35480,AT3G16720,AT5G66070,AT4G15975,AT5G41400,AT4G14365,AT2G18680,AT2G40140,AT3G55980 BAE_NEP1_30MIN_DN Down-regulated by 30 min treatment with 10 mg/ml Nep1 (Table S1 PubmedID:16698904) AT3G16330,AT2G23130,AT4G16563,AT5G50760,AT4G38840,AT2G47440,AT2G28110,AT1G10020,AT1G72510,AT5G25240,AT1G50040,AT3G16660,AT3G06070,AT2G37750,AT5G15310,AT5G37260,AT5G59780,AT3G63200,AT2G19970,AT2G17230,AT1G53885,AT5G62920,AT1G29280,AT4G03210,AT4G39070,AT2G28200 CHARNG_DISRUPTION-HSFA2_HEAT_SHOCK Heat shock response genes most affected by disruption of HsfA2 (Table S1 PubmedID:17085506) AT4G27670,AT5G59720,ATCG00900,AT2G47180,AT1G69040 CHARNG_T-DNA-INSERTION-MUTANT_HEAT_DN Heat stress-responsive genes by arabidopsis T-DNA insertion mutants (Table 1 PubmedID:17085506) AT4G25200,AT5G12020,AT2G26150,AT5G51440,AT2G46240,AT3G09640,AT1G16030,AT5G59720,AT5G37670,AT4G12400,AT2G20560,AT4G26780,AT4G36990,AT5G52640,AT5G01180,AT1G30070,AT1G03070,AT3G63350,AT1G07500,AT5G10695,AT3G09350,AT3G07090,AT2G47180,AT4G11660,AT5G27660,AT3G13470,AT3G51910,AT4G15420,AT3G03520,AT2G22240,AT4G23570,AT5G56000,AT2G24100,AT1G23180,AT5G51740,AT4G04020,AT3G12050,AT4G28390,AT5G04940,AT1G49710,AT2G47730,AT1G79550,AT3G44110,AT3G10020,AT1G78600,AT3G17790,AT1G52870,AT5G64400 SATTLER_VTE2/WT-1D_UP Increased in expression in vte2 relative to wild-type at 1 day. (Table S1 PubmedID:17194769) AT4G15620,AT5G10695,AT5G20230,AT5G52640,AT5G49520,AT5G39410,AT5G22580,AT3G56980,AT3G51660,AT4G22730,AT3G10930,AT3G28210,AT2G43510,AT1G19610,AT1G59860,AT1G05680,AT2G32210,AT2G32190,AT2G29490,AT2G38340,AT2G37770 SATTLER_VTE2/WT-3D_UP Increased in vte2 relative to wild-type at 3 days. (Table S1 PubmedID:17194769) AT3G16530,AT3G53230,AT5G65870,AT3G27400,AT2G18660,AT2G01610,AT4G02330,AT3G15720,AT1G19610,AT1G57630,AT5G06870,AT2G43510,AT4G23190,AT3G50930,AT1G69880,AT5G25450,AT1G68290,AT2G02990,AT2G02010,AT3G03640,AT3G23570,AT5G15870,AT3G25610,AT4G39830,AT5G59490,AT3G26830,AT1G61360,AT1G66920,AT5G11410,AT5G53450,AT4G23210,AT4G12480,AT4G12490,AT4G12500,AT4G12470,AT4G22470,AT2G38530,AT5G40990,AT5G14180,AT5G39050,AT5G52750,AT3G25900,AT5G44390,AT5G14780,AT3G55970,AT2G29350,AT1G26380,AT1G26410,AT1G26390,AT1G26420,AT2G30750,AT2G30770,AT3G14620,AT5G57220,AT4G31970,AT5G38900,AT3G62260,AT4G14365,AT1G44130,AT2G38860,AT1G32940,AT1G59860,AT5G02490,AT1G74310,AT3G46230,AT5G12030,AT3G12580,AT5G52640,AT3G08970,AT2G29500,AT2G35980,AT4G36010,AT1G33960,AT2G43570,AT3G51660,AT2G43620,AT5G05340,AT4G36430,AT3G54150,AT2G17740,AT3G59220,AT5G24160,AT1G02940,AT2G02930,AT1G02930,AT2G29460,AT1G74590,AT1G69930,AT1G17180,AT1G17170,AT3G24500,AT1G18570,AT3G23250,AT2G40350,AT2G38340,AT5G25190,AT4G36990,AT5G04150,AT2G43000,AT2G17040,AT5G46590,AT3G01970,AT2G25000,AT2G38470,AT4G31800,AT5G46350,AT5G49520,AT5G59820,AT1G74100,AT2G15490,AT1G61800,AT3G63380,AT4G19690,AT1G71140,AT5G61520,AT5G46050,AT5G13740,AT5G17990,AT2G04400,AT3G54640,AT4G24690,AT3G28210,AT5G13200,AT1G60730,AT3G09350,AT5G53590,AT5G35735,AT1G70810,AT4G33050,AT3G50770,AT1G56060,AT1G13340,AT2G32210,AT2G32190,AT4G39670,AT5G50335,AT2G21640,AT1G47400,AT4G37290,AT5G14190,AT2G18690,AT1G03820,AT5G65300,AT3G18250,AT1G19020,AT5G10695,AT2G25510,AT5G64510,AT4G02880,AT1G13990,AT5G57510,AT3G02840,AT2G46240,AT5G22500,AT4G39320,AT5G62520,AT1G65500,AT4G20000,AT2G22880,AT1G43910 SATTLER_VTE1-VTE2/WT-1D_UP Increased in both vte1 and vte2 relative to wild-type at 1 day. (Table S1 PubmedID:17194769) AT5G39410 SATTLER_VTE1-VTE2/WT-3D_UP Increased in both vte1 and vte2 relative to wild-type at 3 days. (Table S1 PubmedID:17194769) AT5G52640,AT5G12030,AT3G46230,AT3G12580,AT1G74310,AT1G59860 SATTLER_VTE1-VTE2/WT-3D_TM_UP Increased genes involved in the tryptophan metabolic pathway in vte2 relative to wild-type at 3 days. (Table S1 PubmedID:17194769) AT5G17990,AT2G04400,AT3G54640,AT2G22330,AT4G39950,AT3G26830 SATTLER_VTE1/WT-3D_DN Decreased in vte1 relative to wild-type at 3 days. (Table S2 PubmedID:17194769) AT5G62360,AT5G41080,AT3G62950,AT3G56400,AT4G32770,AT4G04330 SATTLER_VTE2/WT-1D_DN Decreased in vte2 relative to wild-type at 1 day. (Table S2 PubmedID:17194769) AT5G25980,AT5G10120,AT4G24150,AT3G03450,AT3G01670 SATTLER_VTE2/WT-3D_DN Decreased in vte2 relative to wild-type at 3 days. (Table S2 PubmedID:17194769) AT2G40300,AT3G62950,AT5G51720 SATTLER_VTE1-VTE2/WT-3D_DN Decreased in both vte1 and vte2 relative to wild-type at 3 days. (Table S2 PubmedID:17194769) AT3G62950 SATTLER_VTE2/WT_UP Most Highly Upregulated Genes(20) in vte2 Relative to the Wild Type (Table 1 PubmedID:17194769) AT1G65500,AT4G12490,AT2G18660,AT2G38340,AT1G33960,AT1G19610,AT1G56060,AT1G26380,AT1G26410,AT5G05340,AT1G26390,AT2G30750,AT1G02940,AT2G29350,AT2G02010,AT4G19690,AT4G12480,AT1G13340,AT1G26420,AT4G14365 MOLAS_ROOT_RED-LIGHT/DARKGROWN_UP Up-regulated in roots of 7 day old seedlings exposed to 1 h of red light compared to darkgrown controls (Table S1 PubmedID:16908503) AT5G44110,AT3G25850,AT5G22990,AT5G11260,AT3G24520,AT2G15535,AT3G22350,AT3G45160,AT4G17710,AT3G42340,AT5G54470,AT1G35750,AT5G17220,ATCG00340,AT5G41890,AT3G13270,AT1G51210,AT2G21890,ATCG00900,ATCG00065,AT1G51250,AT2G46340,ATCG01060,AT4G08760,AT3G12320,AT5G44360,AT1G02940,AT1G06040,AT1G13670,AT5G28910,AT1G22080,AT5G33240,AT3G53140,AT5G48880,AT4G29540,AT3G13420,AT2G21480,AT3G53130,AT4G08750,ATCG01230,ATCG0090,AT2G21730,AT1G04920,AT5G15480,AT1G34410,AT1G35240,AT4G25750,AT5G02270,AT3G62410,AT2G40080,AT5G25410,AT3G02910,AT5G17200,AT3G22830,AT2G17750,AT5G08220,AT5G52490,AT4G13560,AT1G43010,AT5G04230,AT1G61130,AT5G56470,AT5G28785,AT5G35870,AT1G66000,AT1G21340,AT4G15660,AT3G31900,AT3G42400,AT1G02820,AT2G16365,AT2G05380,AT3G50820,AT2G02950,AT1G72960,AT3G21440,AT5G24120,AT2G46130,AT3G30220,AT3G58080,AT2G36030,AT3G31410,AT1G24260,AT4G18470,ATCG01020,AT2G30520,AT2G24820,AT1G34310,AT1G35520,AT1G34390,AT1G66060,AT2G24830,AT3G09630,AT2G24410,AT1G76280,AT5G25860,AT5G17450,AT5G17320,AT1G09440,AT5G58760,AT1G43000,AT2G30310,AT1G65180,AT5G06980,AT1G09610,AT1G77405,AT1G04880,AT3G17640,AT5G62440,AT5G54230,AT3G16350,AT4G27410,AT5G37170,AT1G74070,AT5G52250,AT5G17050,AT3G21560,AT5G67300,AT2G34180,AT5G11270,AT1G32690,AT1G20720,AT5G01840,AT3G48600,AT4G17910,AT1G43160,AT5G64170,AT2G36080,AT5G22820,AT5G50890,AT2G46410,AT5G41170,AT5G48800,AT5G23960,AT4G27510,AT2G22930,AT5G19940,AT2G30220,AT5G67310,ATMG01190,AT1G59640,AT1G70895,AT2G15970,AT1G20850,AT3G47500,AT4G14440,AT5G02680,AT2G46270,AT1G22770,AT1G17180,AT1G32860,AT4G22970,AT5G18610,AT3G14410,AT3G27880,AT3G62020,AT5G07890,AT4G29230,AT4G33220,AT1G60220,AT1G04990,AT3G25500,AT1G07320,AT4G18730,AT3G63110,AT4G34880,AT3G02140,AT4G23540,AT1G58370,AT3G46640,AT4G34660,AT5G63830,AT2G30960,AT5G35360,AT1G74720,AT5G57630,AT5G15440,AT5G63050,AT5G35430,AT4G17870,AT3G18390,AT1G74800,AT4G01210,AT2G41250,AT2G07698,AT3G25490,AT2G30950,AT1G20696,AT4G23740,AT4G33920,AT5G08020,AT3G46600,AT4G10550,AT1G47610,AT1G16780,AT1G78050,AT3G17790,AT5G40580,AT4G29430,AT4G13940,AT3G18524,AT3G56640,AT4G24330,AT3G06860,AT3G61130,AT1G25988,AT5G04430,AT3G16150,AT3G18210,AT1G20300,AT4G34960,AT1G52380,AT5G16260,AT5G41040,AT5G06460,AT5G61140,AT4G33650,AT2G46225,AT3G01810,AT2G21120,AT5G64010,AT5G05190,AT1G78210,AT3G02870,AT4G15010,AT4G11290,AT2G17510,AT2G28190,AT1G49910,AT5G20000,AT5G20520,AT2G25110,AT1G78060,AT3G17800,AT3G19590,AT5G19990,AT5G58710,AT1G77470,AT1G69420 MOLAS_ROOT_RED-LIGHT/DARKGROWN_DN Down-regulated in roots of 7 day old seedlings exposed to 1 h of red light compared to darkgrown controls (Table S1 PubmedID:16908503) AT5G27600,AT1G68160,AT3G26850,AT4G16444,AT5G32440,AT3G25220,AT2G17265,AT1G72650,AT3G27380,AT4G27990,AT1G20510,AT5G56180,AT1G77180,AT3G53670,AT4G15545,AT4G17420,AT1G20890,AT1G70160,AT1G07110,AT5G37500,AT5G54140,AT5G48990,AT3G55770,AT3G08040,AT5G57970,AT1G68670,AT5G55850,AT4G15530,AT5G63950,AT4G09340,AT1G64610,AT1G14080,AT3G22942,AT1G50200,AT5G61590,AT5G44460,AT5G57940,AT2G19450,AT1G54220,AT1G58170,AT2G39420,AT1G74680,AT3G22950,AT3G13222,AT3G03150,AT1G67140,AT1G21770,AT4G01960,AT1G53560,AT1G06930,AT1G49840,AT3G54200,AT5G42470,AT4G27450,AT3G06440,AT1G13700,AT3G07560,AT5G43230,AT2G38480,AT5G61510,AT4G01450,AT5G06260,AT5G36250,AT5G59840,AT2G27330,AT1G66680,AT5G03470,AT2G41180,AT4G08320,AT1G20570,AT1G53430,AT2G26420,AT1G58030,AT3G15540,AT4G05210,AT1G51070,AT1G25500,AT5G59940,AT3G02770,AT2G32010,AT3G11770,AT1G53035,AT1G06590,AT5G23380,AT3G05675,AT4G17486,AT1G50890,AT3G12010,AT1G80260,AT1G53450,AT1G53440,AT4G08280,AT4G23870,AT3G13062,AT3G02875,AT5G54390,AT5G49770,AT4G16330,AT2G47350,AT5G56730,AT2G18710,AT1G71530,AT4G20760,AT5G45000,AT5G24450,AT3G60740,AT2G29070,AT1G62480,AT5G58787,AT1G34210,AT3G15070,AT4G26100,AT2G37280,AT1G04240,AT1G26260,AT1G75410,AT1G32090,AT3G29270,AT5G19570,AT2G05430,AT3G26750,AT2G32910,AT5G53220,AT5G57830,AT5G50200,AT3G14225,AT5G44240,AT3G63420,AT1G20810,AT5G23230,AT5G38030,AT1G14250,AT3G02070,AT4G19220,AT1G06150,AT3G52100,AT1G34220,AT3G15060,AT4G26090,AT3G19440,AT5G45970,AT1G29390,AT5G56150,AT5G10650,AT2G44130,AT4G33120,AT5G53120,AT5G09290,AT4G23590,AT2G45170,AT2G16640,AT2G25170,AT1G10730,AT1G52710,AT3G30290,AT1G58410,AT1G07640,AT2G26070,AT2G20500,AT3G21430,AT2G24960,AT1G24350,AT1G31010,AT1G23020,AT5G24410,AT4G39955,AT3G16190,AT5G64550,AT1G55630,AT1G67690,AT5G53450,AT3G24720,AT3G52260,AT5G27650,AT2G33130,AT5G38020,AT2G26390,AT4G27290,AT2G25150,AT1G22370,AT1G28040,AT4G27820,AT3G49860,AT1G61660,AT2G44140,AT4G33110,AT5G53130,AT4G27830,AT1G77920,AT2G47830,AT4G03320,AT1G44050,AT3G01730,AT2G25200,AT4G19160,AT5G65180,AT1G11170,AT2G26780,AT5G39970,AT5G06280,AT4G22640,AT3G49360,AT3G14570,AT5G61920,AT5G57620,AT3G56960,AT3G62680,AT1G62200,AT5G15920,AT5G63200,AT1G01750,AT3G14690,AT4G32960,AT4G13195,AT3G02980,AT1G13910,AT5G06480,AT1G79580,AT4G15370,AT5G06640,AT1G23720,AT1G70450,AT3G44860,AT1G31440,AT1G27370,AT5G49080,AT1G15520,AT5G22540,AT2G43060,AT1G28610,AT4G01410,AT2G35460,AT5G36080,AT4G08400,AT4G08410,AT1G07300,AT1G71680,AT3G12730,AT4G38530,AT1G03010,AT5G23690,AT2G23030,AT2G17420,AT3G07610,AT3G56400,AT2G15370,AT1G76825,AT3G28510,AT3G08860,AT4G32810,AT4G16930,AT2G33220,AT2G45840,AT4G26490,AT2G02360,AT1G47960,AT4G29250,AT1G72910,AT5G50550,AT3G07490,AT1G61950,AT5G02690,AT1G47270,AT5G38960,AT3G07600,AT3G27070,AT1G54560,AT4G38830,AT1G24320,AT1G29020,AT1G69970,AT2G16970,AT5G52670,AT5G53980,AT5G45090,AT2G45800,AT4G10260,AT4G15510,AT1G72530,AT3G54590,AT1G76720,AT1G76810,AT1G72930,AT5G50650,AT4G13290,AT4G02540,AT5G44920,AT3G11340,AT3G57980,AT1G01840,AT2G43180,AT5G52975,AT1G49110,AT4G28560,AT4G13390,AT3G45720,AT5G04370,AT4G03440,AT1G02980,AT5G13220,AT5G54420,AT1G65370,AT1G59900,AT1G33540,AT4G16740,AT4G34470,AT2G27700,AT5G27530,AT4G10500,AT1G32270,AT5G33340,AT5G48770,AT4G08450,AT1G43730,AT1G78780,AT5G46540,AT5G26270,AT1G70720,AT4G22870,AT5G44300,AT1G12400,AT4G35010,AT3G30660,AT4G17980,AT1G25270,AT2G02140,AT3G46240,AT2G31070,AT4G34210,AT5G05900,AT2G19070,AT5G36740,AT4G31060,AT5G37060,AT3G08750,AT5G22590,AT1G64130,AT5G56620,ATMG01230,AT5G06170,AT2G25820,AT4G39770,AT5G47160,AT3G58070,AT3G24900,AT3G29210,AT4G04010,AT1G32840,AT2G25450,AT4G27150,AT5G02350,AT3G51560,AT1G10000,AT3G53770,AT5G22570,AT1G44850,AT4G03979,AT5G43450,AT1G33930,AT5G17880,AT4G00390,AT2G13270,AT3G10060,AT4G19000,AT2G25540,AT5G45080,AT1G13200,AT1G06250,AT1G58270,AT3G12820,AT4G30030,AT3G19780,AT1G48730,AT2G19060,AT5G36670,AT3G25010,AT3G25020,AT5G34900,AT3G47260,AT3G30440,AT3G32900,AT3G44500,AT1G35100,AT1G42393,AT5G36035,AT2G10390,AT5G40940,AT5G43770,AT2G18490,AT5G39785,AT3G23770,AT2G36440,AT4G07480,AT1G62890,AT1G36340,AT1G59850,AT1G57770,AT1G07490,AT5G22555,AT2G44000,AT5G29020,AT1G21270,AT4G24650,AT5G45070,AT3G21840,AT3G21570,AT1G20130,AT5G21110,AT3G27785,AT1G09370,AT1G50650,AT2G02580,AT2G25510,AT2G21990,AT3G30560,AT5G06920,AT1G41900,AT5G38000,AT2G29150,AT3G29035,AT4G08710,AT4G22760,AT3G43750,AT1G33960,AT1G17600,AT3G49620,AT1G22900,AT2G42050,AT3G28155,AT2G32880,AT2G02720,AT1G59840,AT1G21280,AT5G15140,AT5G50500,AT5G60080,AT3G31415,AT2G19340,AT4G01920,AT1G56710,AT1G23910,AT1G70870,AT3G03370,AT3G43740,ATMG01020,AT1G07180,AT4G12330,AT3G46730,AT5G61290,AT1G33640,AT3G63330,AT4G33600,AT5G41660,AT3G21370,AT2G34230,AT1G11590,AT4G09610,AT1G29610,AT5G27180,AT1G12700,AT5G23830,AT5G49590,AT5G45500,AT2G19330,AT3G27980,AT1G43205,AT4G07523 MOLAS_ROOT_WHITE-LIGHT/RED-LIGHT/DARKGROWN_UP Up-regulated in both in comparison of gene expression profiles from roots grown in continuous white light with roots of seedlings exposed to 1 h of red light relative to dark-grown roots (Table 2 PubmedID:16908503) AT5G11260,AT5G52250,AT2G40080,AT5G48880,AT3G21560,AT5G44110,AT5G02270,AT3G22830,AT2G46340,AT1G43160,AT5G54470,AT3G45160 MOLAS_ROOTS_WHITE-LIGHT_SEEDLING_RED-LIGHT/DARK-GROWN_DN Down-regulated in both in comparison of gene expression profiles from roots grown in continuous white light with roots of seedlings exposed to 1 h of red light relative to dark-grown roots (Table 2 PubmedID:16908503) AT4G27150,AT3G56400,AT4G09610,AT5G04370,AT4G10500,AT3G11340,AT5G43770,AT5G45500,AT3G07600,AT5G45070 MOLAS_ROOT_DARK-GROWN-SEEDLING_RED-LIGHT_UP Up-regulated expression (>2-fold) of genes involved in photomorphogenesis in roots of 7-d-old dark-grown seedlings exposed to 1 h (;12 lmol m_2 s_1) of red light (Table S2 PubmedID:16908503) AT5G11260,AT5G48800,AT2G46340,AT2G02950,AT2G30520,AT5G52250,AT2G40080,AT1G22770 MOLAS_ROOT_DARK-GROWN-SEEDLING_RED-LIGHT_DN Down-regulated expression (>2-fold) of genes involved in photomorphogenesis in roots of 7-d-old dark-grown seedlings exposed to 1 h (;12 lmol m_2 s_1) of red light (Table S2 PubmedID:16908503) AT1G03010,AT3G46240 MOLAS_ROOT_DARK-GROWN_RED-LIGHT_UP Up-regulated expression (>2-fold) of genes involved in Transcriptional Regulation in roots of 7-d-old dark-grown seedlings exposed to 1 h (;12 lmol m_2 s_1) of red light (Table S2 PubmedID:16908503) AT1G43160,AT1G34410,AT1G35520,AT1G34390,AT5G11260,AT1G24260,AT5G54230,AT3G16350,AT3G21440,AT2G46410,AT5G67300,AT4G27410,AT3G24520,AT3G22830,AT2G36080,AT4G17710,AT5G17320,AT1G06040,AT5G54470,AT5G15480,AT5G22990,AT4G17910,AT1G21340,AT1G34310,AT1G35240,AT5G67310 MOLAS_ROOT_DARK-GROWN_RED-LIGHT_DN Down-regulated expression (>2-fold) of genes involved in Transcriptional Regulation in roots of 7-d-old dark-grown seedlings exposed to 1 h (;12 lmol m_2 s_1) of red light (Table S2 PubmedID:16908503) AT4G31060,AT2G25820,AT3507610,AT3G12730,AT3G27785,AT3G12820,AT5G56620,AT4G17980,AT3G29035,AT5G36740,AT5G22570,AT3G56400,AT3G43750,AT2G18490,AT3G58070,AT3G57980,AT2G43060,AT5G36670 OLMEDO_ETHYLENE_UP Induced transcripts(top 50) by ethylene (Table S3 PubmedID:16920797) AT5G40590,AT1G23730,AT2G41230,AT5G19890,AT3G23240,AT4G12480,AT1G49570,AT2G39980,AT1G50110,AT5G20820,AT2G42850,AT2G44570,AT4G08710,AT3G15370,AT1G72290,AT2G22880,AT4G15550,AT2G17880,AT5G18470,AT1G19900,AT5G38930,AT5G55620,AT5G02760,AT1G54970,AT1G76470,AT4G17200,AT2G29460,AT3G51400,AT1G06080,AT5G18670,AT5G03310,AT5G17780,AT4G35190,AT1G05010,AT1G28370,AT2G47550,AT2G26070,AT2G34610,AT1G05020,AT5G37080,AT5G59540,AT5G33340,AT5G50335,AT1G25320,AT3G42700,AT5G09970,AT4G12410,AT3G01970,AT1G28520,AT3G45280 OLMEDO_ETHYLENE_DN Repressed transcripts(top 50) by ethylene (Table S4 PubmedID:16920797) AT1G75900,AT5G42590,AT1G29660,AT5G13900,AT3G31415,AT5G42600,AT4G15920,AT5G09520,AT5G13580,AT4G36610,AT5G48010,AT2G48140,AT5G23190,AT5G47470,AT1G52830,AT4G25780,AT5G15780,AT4G18280,AT2G34070,AT3G53040,AT3G29250,AT3G50400,AT2G38760,AT4G16985,AT2G22510,AT2G20750,AT5G12420,AT3G32040,AT2G06470,AT4G35690,AT4G22610,AT5G42580,AT4G16640,AT1G74460,AT4G01140,AT5G48000,AT1G66800,AT2G24762,AT5G47990,AT1G18870,AT4G10500,AT2G16630,AT3G13980,AT2G22930,AT1G72140,AT5G53250,AT4G10150,AT3G62320,AT2G30790,AT4G25250 SWARUP_AUXIN_ROOT_UP Induced by auxin during lateral root initiation in tissues surrounding the initiation site (Table S1 PubmedID:18622388) AT1G01140,AT1G02110,AT1G04170,AT1G04190,AT1G04330,AT1G04510,AT1G05470,AT1G05577,AT1G05810,AT1G06710,AT1G06770,AT1G07070,AT1G07370,AT1G08130,AT1G08360,AT1G08640,AT1G09620,AT1G09830,AT1G10270,AT1G11670,AT1G13195,AT1G13380,AT1G14300,AT1G14620,AT1G14810,AT1G15420,AT1G15930,AT1G16740,AT1G16870,AT1G17690,AT1G18320,AT3G10110,AT1G18480,AT1G18540,AT1G20300,AT1G20590,AT1G20610,AT1G21060,AT1G21980,AT1G22270,AT1G22780,AT1G23080,AT1G23220,AT1G25280,AT1G25570,AT1G26750,AT1G26880,AT1G26910,AT1G27390,AT1G27400,AT1G28290,AT1G28395,AT1G30620,AT1G31860,AT1G31970,AT1G33410,AT1G34030,AT1G43860,AT1G44780,AT1G48120,AT1G48630,AT1G48830,AT1G49310,AT1G49400,AT1G50570,AT1G50560,AT1G51420,AT1G51950,AT1G52980,AT1G53460,AT1G54330,AT1G54690,AT1G55430,AT1G55500,AT1G58340,AT1G59990,AT1G60010,AT1G61350,AT1G61570,AT1G61667,AT1G61730,AT1G63160,AT1G64400,AT1G64450,AT1G64550,AT1G64700,AT1G64790,AT1G65700,AT1G66480,AT1G67320,AT1G67620,AT1G67630,AT1G67750,AT1G68990,AT1G70410,AT1G70470,AT1G70940,AT1G71210,AT1G71260,AT1G71840,AT1G72550,AT1G73240,AT1G73540,AT1G74240,AT1G74260,AT1G74440,AT1G74660,AT1G75670,AT1G76090,AT1G76300,AT1G77470,AT1G77550,AT1G77670,AT1G77690,AT1G77840,AT1G78100,AT1G78390,AT1G78650,AT1G80840,AT2G01250,AT2G01430,AT2G03450,AT2G03740,AT2G04160,AT2G15000,AT2G15690,AT2G16440,AT2G16660,AT2G17230,AT2G17250,AT2G17280,AT2G18330,AT2G18400,AT2G19520,AT2G19540,AT2G19730,AT2G20060,AT2G20450,AT2G20530,AT2G20585,AT2G21160,AT2G22410,AT2G22880,AT2G22870,AT2G23170,AT2G23350,AT2G23360,AT2G23450,AT2G24500,AT2G25670,AT2G27710,AT2G27775,AT2G27810,AT2G28210,AT2G28690,AT2G28900,AT2G28960,AT2G29140,AT2G29540,AT2G31530,AT2G31610,AT2G31740,AT2G32060,AT2G32070,AT2G33370,AT2G33720,AT2G34050,AT2G34357,AT2G34650,AT2G35270,AT2G35605,AT2G35770,AT2G35790,AT2G36070,AT2G36160,AT2G36170,AT2G36220,AT2G36250,AT2G36620,AT2G36910,AT2G36930,AT2G37190,AT2G37690,AT2G38020,AT2G38010,AT2G38120,AT2G39020,AT2G39370,AT2G39380,AT2G39390,AT2G39420,AT2G39990,AT2G40550,AT2G40590,AT2G40660,AT2G40700,AT2G41100,AT2G41110,AT2G41950,AT2G42740,AT2G43660,AT2G44640,AT2G45240,AT2G45440,AT2G45710,AT2G46230,AT2G46520,AT2G47260,AT2G47610,AT2G47860,AT3G01790,AT3G02080,AT3G02530,AT3G02560,AT3G02650,AT3G02760,AT3G02790,AT3G02800,AT3G02920,AT3G03170,AT3G03960,AT3G04710,AT3G04770,AT3G04840,AT3G04920,AT3G05590,AT3G05900,AT3G06370,AT3G06790,AT3G07110,AT3G07750,AT3G07770,AT3G08760,AT3G09630,AT3G09920,AT3G10050,AT3G10090,AT3G10600,AT3G10610,AT3G10870,AT3G11110,AT3G11150,AT3G11250,AT3G11510,AT3G11710,AT3G11830,AT3G13160,AT3G13560,AT3G13672,AT3G13790,AT3G14070,AT3G14390,AT5G11880,AT3G14600,AT3G15680,AT3G16080,AT3G18130,AT3G18524,AT3G18710,AT3G18760,AT3G19130,AT3G19720,AT3G20000,AT3G20050,AT3G20330,AT3G20430,AT3G20830,AT3G21700,AT3G22300,AT3G22500,AT3G23325,AT3G23830,AT3G23940,AT3G23990,AT3G24240,AT3G25400,AT3G26760,AT3G27070,AT3G27080,AT3G27280,AT3G27740,AT3G28860,AT3G28900,AT3G44590,AT3G44820,AT3G46040,AT3G46560,AT3G46940,AT3G48150,AT3G48250,AT3G48425,AT3G48930,AT3G49080,AT3G51670,AT3G51800,AT3G52040,AT3G52580,AT3G52780,AT3G53020,AT3G53890,AT3G54090,AT3G54750,AT3G54960,AT3G55090,AT3G55280,AT3G55400,AT3G55410,AT3G55605,AT3G56090,AT3G56150,AT3G56340,AT3G56900,AT3G56990,AT3G57560,AT3G58180,AT3G58700,AT3G59540,AT3G59650,AT3G60660,AT3G60770,AT3G61820,AT3G62100,AT3G62310,AT3G62530,AT3G62460,AT3G62870,AT4G00100,AT4G00620,AT4G00600,AT4G00810,AT4G00940,AT4G01250,AT4G01630,AT4G02930,AT4G03550,AT4G04180,AT4G05120,AT4G05110,AT4G05400,AT4G08040,AT4G08850,AT4G09570,AT4G10480,AT4G11160,AT4G11280,AT4G11420,AT4G12060,AT4G12110,AT4G12410,AT4G13130,AT4G13170,AT4G13740,AT4G14320,AT4G14350,AT4G15000,AT4G15640,AT4G15770,AT4G16700,AT4G17785,AT4G18040,AT4G18440,AT4G18730,AT4G18910,AT4G19710,AT4G20020,AT4G21400,AT4G21410,AT4G21680,AT4G21700,AT4G22620,AT4G22710,AT4G22690,AT4G22780,AT4G22850,AT4G23620,AT4G24570,AT4G24830,AT4G24940,AT4G25280,AT4G25740,AT4G25810,AT4G25890,AT4G26050,AT4G26140,AT4G26300,AT1G66530,AT4G26690,AT4G26870,AT4G26900,AT4G27180,AT4G27280,AT4G27660,AT4G29390,AT4G29410,AT4G30140,AT4G30220,AT4G30890,AT4G30990,AT4G31160,AT4G31790,AT4G32290,AT4G32610,AT4G33180,AT4G33350,AT4G33680,AT4G34265,AT4G34555,AT4G34670,AT4G35550,AT4G35850,AT4G36360,AT4G37210,AT4G37280,AT4G37390,AT1G59500,AT4G37590,AT4G39230,AT4G39280,AT4G39300,AT5G01470,AT5G02450,AT5G02610,AT5G02830,AT5G03490,AT5G03970,AT5G04870,AT5G05430,AT5G05580,AT5G06360,AT5G06460,AT5G06860,AT5G07090,AT5G08570,AT5G08600,AT5G09250,AT5G09510,AT5G09770,AT5G10360,AT5G10720,AT5G10920,AT5G11010,AT5G11200,AT5G11690,AT5G11740,AT5G12330,AT5G13490,AT5G14050,AT5G14650,AT5G15350,AT5G15520,AT5G16040,AT5G16070,AT5G16290,AT5G18400,AT5G18470,AT5G19040,AT5G19300,AT5G19320,AT5G20040,AT5G20540,AT5G20890,AT5G22440,AT5G22860,AT5G23250,AT5G23850,AT5G24330,AT5G24840,AT5G26710,AT5G26830,AT5G27120,AT5G27330,AT5G27640,AT5G27740,AT5G27770,AT5G28370,AT5G35530,AT5G35620,AT5G37350,AT5G38690,AT5G39740,AT5G40200,AT5G40770,AT5G40780,AT5G41190,AT5G41620,AT5G41880,AT5G42150,AT5G43700,AT5G44710,AT5G45590,AT5G46100,AT5G46840,AT5G47060,AT5G47210,AT5G47455,AT5G47550,AT5G52050,AT5G52470,AT5G52650,AT5G52810,AT5G52900,AT5G53070,AT5G53290,AT5G53320,AT5G54580,AT5G54900,AT5G55050,AT5G55200,AT5G55920,AT5G56740,AT5G56940,AT5G57280,AT5G57290,AT5G57390,AT5G57990,AT5G58210,AT5G59180,AT5G59480,AT5G59740,AT5G60670,AT5G60960,AT5G60990,AT5G61000,AT5G61170,AT5G61880,AT5G63810,AT5G63850,AT5G64140,AT5G64340,AT5G64680,AT5G65320,AT5G65500,AT5G65860,AT5G66540,AT5G67240,AT5G67260,AT2G24990,AT3G10660,AT3G11170,AT3G61520,AT5G02820,AT5G11170,AT5G25780,AT5G27140,AT5G58420,AT5G28460,AT2G17360 KEMPEMA_EXP2_UP Stress-response genes preferentially expressed in experiment 2. (Table S1 PubmedID:17189325) HSP70B,AT1G53540,AT1G54050,AT1G59860,HSP101,HSFA2,AT2G29500,HSP70T-2,BAG6,PDX1.2,HSP17.4,ATHSP22.0,AT4G12400,HSP23.6-MITO,HSP17.6II,HSP17.6A,AT5G37670,ROF2,AT5G51440,HSP18.2 KEMPEMA_SLWF-NYMPH-FEEDING_UP Up-expressed after SLWF nymph feeding (Table S2 PubmedID:17189325) AT5G60420,AT2G31950,AT3G07030,AT5G56185,AT5G35440,AT3G50770,AT2G43570,AT4G23150,AT4G21830,AT1G26390,AT2G29350,AT3G51860,AT4G21850,AT4G00700,AT1G33960,AT4G10500,AT5G46050,AT3G22600,AT5G64000,AT2G45220,AT1G73260,AT3G18250,AT1G09080,AT5G13320,AT3G26830,AT2G43510,AT3G11340,AT3G13790,AT1G03850,AT3G25010,AT4G11650,AT1G09240,AT4G15610,AT2G14610,AT1G75040,AT2G32680,AT3G47480,AT4G25000,AT3G61190,AT5G50200,AT2G26400,AT2G44240,AT3G13610,AT1G76960,AT3G51330,AT4G23140,AT1G35230,AT4G20110,AT3G48640,AT2G37130,AT5G45380,AT1G19250,AT5G24530,AT4G12490,AT1G15520,AT2G46400,AT4G12280,AT1G61800,AT5G25260,AT5G38710,AT1G22500,AT4G15680,AT5G20150,AT4G23700,AT1G08450,AT2G35980,AT3G27210,AT3G50930,AT5G26920,AT1G10340,AT3G04070,AT1G77510,AT5G20230,AT2G18690,AT3G28540,AT5G10380,AT3G28270,AT4G34230,AT3G52430,AT5G40780,AT5G57785,AT1G15670,AT4G28390,AT3G16430,AT1G32940,AT4G39030,AT2G17740,AT3G45860,AT1G04980,AT1G52200,AT1G55210,AT3G09020,AT4G16260,AT5G39050,AT2G37760,AT4G01720,AT2G39710,AT2G02810,AT2G13810,AT2G38940,AT1G77920,AT3G63380,AT4G19420,AT5G18470,AT5G55050,AT1G02930,AT3G30180,AT2G41410,AT2G05540,AT4G03320,AT1G13990,AT3G03470,AT1G24140,AT3G50480,AT3G10500,AT3G49120,AT5G26340,AT5G48380,AT1G70690,AT3G25020,AT1G56010,AT5G17760,AT1G28190,AT1G17745,AT2G39660,AT1G73805,AT1G56120,AT3G54960,AT3G62600,AT4G39950,AT5G33290,AT3G51430,AT2G38860,AT5G41740,AT2G02390,AT4G24190,AT1G62810,AT5G20960,AT1G72680,AT1G73800,AT3G07520,AT3G52710,AT2G24240,AT5G61790,AT5G43780,AT1G76590,AT3G63010,AT5G63680,AT4G25110,AT1G21900,AT5G52390,AT4G01610,AT5G24160,AT2G16700,AT5G35735,AT3G29250,AT1G33560,AT1G09210,AT4G32940,AT1G05570,AT5G64260,AT4G16660,AT1G10410,AT1G64400,AT3G10980,AT1G55265,AT4G25900,AT3G16460,AT2G42790,AT5G10740,AT5G51070,AT1G69840,AT4G33150,AT5G05110,AT2G04460,AT1G63090,AT3G10300,AT2G25110,AT5G01850,AT2G26560,AT4G34710,AT1G14360,AT5G64570,AT5G37600,AT5G05320,AT5G61520,AT1G22400,AT1G74020,AT2G17720,AT4G36670,AT1G60420,AT2G04400,AT2G39030,AT1G30270,AT3G18830,AT3G44720,AT1G71880,AT4G35750,AT2G02930,AT2G33150,AT2G47470,AT3G22910,AT3G56950,AT1G66500,AT1G61250,AT1G24530,AT3G24090,AT4G25490,AT2G15080,AT3G05500,AT2G37710,AT1G65820,AT4G36760,AT3G05200,AT1G09560,AT2G46600,AT3G26170,AT2G38290,AT5G07340,AT1G66960,AT3G07700,AT4G00355,AT1G68570,AT2G35930,AT3G17820,AT2G35060,AT1G56340,AT4G29900,AT3G54640,AT1G27200,AT5G18780,AT1G69450,AT5G62740,AT3G07720,AT1G27980,AT4G33540,AT5G40760,AT3G06860,AT1G43910,AT1G77810,AT5G56350,AT4G19960,AT5G54500,AT5G55930,AT1G72700,AT3G26840,AT4G18280,AT4G34180,AT2G37110,AT5G18490,AT1G22070,AT5G04930,AT5G10750,AT5G14940,AT4G12500,AT5G41410,AT5G24210,AT1G13750,AT1G52600,AT2G32920,AT5G59420,AT2G03120,AT5G51830,AT5G47550,AT3G56170,AT3G46620,AT4G23260,AT5G56150,AT3G51130,AT4G21620,AT3G60190,AT1G62790,AT5G07100,AT4G33920,AT5G21090,AT1G08460,AT5G64120,AT3G04000,AT3G08760,AT4G36220,AT4G24690,AT2G01650,AT4G01430,AT2G25520,AT1G28580,AT2G17500,AT4G27830,AT5G51040,AT1G52890,AT1G72890,AT1G80460,AT5G61530,AT2G40435,AT1G18390,AT5G39590,AT3G48890,AT1G18260,AT2G05520,AT5G04720,AT5G27350,AT1G71040,AT3G15820,AT5G19440,AT5G16910,AT1G29310,AT4G24120,AT1G69410,AT1G26440,AT2G45030,AT5G04850,AT1G18570,AT4G18930,AT2G41705,AT5G53550,AT2G34250,AT4G29210,AT5G19550,AT5G58710,AT3G04010,AT2G18950,AT1G53310,AT3G11880,AT4G16760,AT2G26600,AT1G22370,AT4G31500,AT3G56310,AT4G17830,AT2G18170,AT4G26130,AT5G50380,AT5G07470,AT5G07830,AT2G24360,AT5G02040,AT2G22660,AT1G16900,AT5G20910,AT5G66320,AT2G26230,AT2G31060,AT2G43850,AT5G13490,AT5G53480,AT4G37540,AT5G48850,AT3G19260,AT5G04220,AT3G12570,AT1G09100,AT3G08950,AT3G23600,AT1G32790,AT3G09840,AT3G23570,AT2G39050,AT2G27080,AT3G26290,AT1G79610,AT1G32340,AT5G19140,AT2G45140,AT3G27110,AT1G69640,AT2G47800,AT1G27760,AT1G07670,AT5G54870,AT3G47550,AT3G45310,AT4G23210,AT2G43620,AT2G30750,AT1G29150,AT4G39090,AT2G40950,AT2G39480,AT4G29190,AT5G13800,AT1G74940,AT4G24290,AT5G10860,AT1G05000,AT3G04060,AT5G17060,AT5G40170,AT5G42090,AT4G32180,AT3G52190,AT2G40110,AT3G52850,AT1G62710,AT1G18470,AT3G07680,AT4G38260,AT5G64400,AT1G31130,AT2G43970,AT1G43130,AT3G53970,AT2G25450,AT5G03610,AT1G19270,AT2G17200,AT1G29400,AT3G28050,AT1G50940,AT2G32260,AT2G30040,AT1G18160,AT5G05460,AT4G19880,AT4G33300,AT4G34630,AT2G31800,AT1G07890,AT2G17120,AT1G06890,AT3G06810,AT3G05090,AT2G26510,AT1G10730,AT4G21470,AT2G38170,AT5G04540,AT5G41350,AT5G01010,AT3G01800,AT5G05730,AT5G42080,AT1G59960,AT2G21060,AT5G54430,AT2G18730,AT2G39980,AT5G03380,AT1G16970,AT2G43790,AT2G36300,AT1G18740,AT3G11270,AT1G70770,AT1G44960,AT3G03610,AT3G17910,AT3G03990,AT2G07722,AT5G39020,AT1G11910,AT1G59870,AT1G70160,AT4G24040,AT4G24220,AT5G43900,AT1G17080,AT3G13940,AT1G34760,AT1G54320,AT4G11740,AT1G02500,AT3G04090,AT5G40370,AT5G42370,AT2G33730,AT3G21600,AT3G28890,AT3G14090,AT3G60800,AT3G51250,AT3G13460,AT2G40360,AT2G20340,AT1G24793,AT1G49160,AT2G22570,AT4G31240,AT1G20620,AT5G17640,AT1G27000,AT3G47780,AT5G04170,AT5G03200,AT3G57570,AT5G45160,AT2G01300,AT1G20200,AT4G11370,AT4G28200,AT5G20730,AT3G21220,AT2G21620,AT5G57870,AT1G27530,AT4G00500,AT1G55730,AT5G17380,AT4G28370,AT3G02740,AT2G20390,AT1G75200,AT1G79450,AT3G25800,AT1G16210,AT3G59920,AT3G06540,AT1G64970,AT2G14080,AT5G23540,AT3G18990,AT1G54990,AT1G69250,AT5G10780,AT5G38470,AT1G12970,AT5G39570,AT5G17190,AT1G04850,AT3G27670,AT3G11580,AT1G52420,AT5G24610,AT3G44880,AT1G07650,AT1G18910,AT3G63110,AT4G16420,AT1G54030,AT3G13870,AT2G32430,AT5G62290,AT3G47810,AT2G11810,AT5G51770,AT1G43580,AT5G02500,AT3G15430,AT5G27140,AT2G46450,AT1G59610,AT1G65720,AT5G59550,AT5G58410,AT3G58680,AT5G12880,AT4G38360,AT2G42680,AT4G22220,AT1G11890,AT5G01750,AT5G57580,AT2G41700,AT1G61790,AT3G17880,AT1G76300,AT1G08320,AT2G44100,AT5G15810,AT1G50370,AT5G05190,AT1G60490,AT2G37150,AT3G07610,AT4G38550,AT5G54760,AT2G01980,AT5G57950,AT4G30530,AT2G17980,AT4G19810,AT4G15470,AT5G35680,AT2G46920,AT3G24982,AT5G46340,AT4G16830,AT1G18270,AT5G43100,AT1G20980,AT1G09270,AT3G06720,AT5G42950,AT5G61450,AT5G59840,AT3G04240,AT4G39955,AT5G46920,AT3G50920,AT1G64350,AT3G02875,AT1G75140,AT1G19660,AT1G77210,AT3G62550,AT1G09770,AT2G32700,AT1G16180,AT1G07140,AT5G48120,AT4G05160,AT2G21270,AT4G29500,AT2G02970,AT5G03080,AT1G71780,AT1G17460,AT5G65910,AT1G20110,AT5G40670,AT5G52510,AT5G63410,AT5G08500,AT3G01340,AT1G73980,AT5G48480,AT3G59770,AT5G24500,AT3G02910,AT5G54660,AT4G01880,AT3G13772,AT1G78930,AT3G03570,AT2G39725,AT3G51550,AT2G47170,AT1G13000,AT3G14010,AT4G03820,AT5G47750,AT4G27690,AT1G22990,AT5G52470,AT2G37520,AT1G07030,AT5G19860,AT5G08590,AT4G02350,AT3G16785,AT3G24120,AT5G40010,AT5G05700,AT3G61670,AT4G35480,AT3G20920,AT1G30000,AT1G23490,AT3G55320,AT5G14950,AT2G43130,AT5G08560,AT2G26590,AT3G56740,AT3G22220,AT4G38440,AT4G14716,AT5G46860,AT3G03380,AT5G58510,AT3G28690,AT3G44300,AT4G27750,AT3G52240,AT3G15040,AT5G48030,AT1G14000,AT2G39760,AT4G21710,AT2G31970,AT4G02640,AT3G08020,AT5G64350,AT3G55070,AT1G14780,AT3G54100,AT5G65760,AT1G03280,AT3G62580,AT3G22430,AT3G60470,AT4G12590,AT1G13060,AT4G32040,AT1G48790,AT5G27860,AT2G41740,AT4G30080,AT1G16420,AT4G11150,AT4G24680,AT1G66550,AT2G30710,AT3G60580,AT3G09300,AT4G39230,AT4G27850,AT5G61150,AT5G03520,AT5G56160,AT2G35635,AT4G02480,AT3G45130,AT5G08550,AT5G35400 KEMPEMA_SLWF-NYMPH-FEEDING_DN Down-expressed after SLWF nymph feeding (Table S2 PubmedID:17189325) AT2G46100,AT1G57660,AT2G14920,AT5G63320,AT3G25760,AT1G01840,AT4G33140,AT5G53760,AT5G54850,AT5G65320,AT1G54130,AT3G60660,AT4G08700,AT4G18425,AT1G32430,AT1G15910,AT5G14500,AT2G43400,AT2G03870,AT3G59800,AT4G20930,AT3G17380,AT1G19120,AT4G00480,AT3G17930,AT3G29370,AT5G60750,AT5G47520,AT2G18910,AT1G74780,AT3G18710,AT4G33950,AT1G74810,AT5G48640,AT5G11460,AT3G47000,AT1G29820,AT1G80530,AT3G59840,AT4G14550,AT1G27070,AT1G18030,AT2G26500,AT5G17560,AT1G51805,AT1G08560,AT5G11380,AT2G40040,AT2G40980,AT5G12900,AT3G14600,AT2G13360,AT3G04810,AT1G63800,AT2G16380,AT5G26330,AT5G53200,AT2G17280,AT5G44720,AT2G43920,AT5G62880,AT2G45160,AT2G37190,AT5G14100,AT3G16010,AT5G67210,AT5G59800,AT3G18980,AT5G40980,AT5G23430,AT5G58450,AT5G49010,AT4G25680,AT1G47410,AT2G29320,AT1G65070,AT3G11560,AT1G20540,AT5G45020,AT5G08540,AT1G09250,AT5G56750,AT3G61100,AT2G23590,AT5G55120,AT2G29730,AT5G49630,AT5G44210,AT5G63480,AT3G59710,AT1G79190,AT2G28600,AT2G44440,AT2G39580,AT2G41990,AT5G46450,AT5G43070,AT1G27130,AT5G18970,AT5G57490,AT3G15630,AT5G11250,AT5G40060,AT1G54690,AT1G57790,AT5G14610,AT1G64660,AT2G20930,AT5G16240,AT1G06010,AT1G02475,AT5G63140,AT5G03130,AT4G22120,AT3G29290,AT2G15960,AT4G20780,AT4G09550,AT4G29410,AT3G48970,AT5G03370,AT3G47490,AT5G19855,AT2G45740,AT5G56230,AT3G07510,AT5G16250,AT3G18960,AT2G47400,AT1G75030,AT3G62470,AT3G06660,AT1G18485,AT1G75840,AT4G24460,AT3G23840,AT4G34920,AT5G20130,AT3G26744,AT5G15390,AT2G01320,AT3G09800,AT5G17070,AT5G56590,AT3G10970,AT1G26650,AT5G48485,AT2G27290,AT2G42900,AT1G50730,AT4G19500,AT2G36430,AT1G67320,AT2G25660,AT5G47700,AT3G44020,AT1G66900,AT1G56230,AT5G07860,AT3G12210,AT1G21460,AT5G41340,AT1G60660,AT5G20220,AT4G05180,AT3G51510,AT3G07200,AT1G29390,AT3G57990,AT4G37110,AT2G32880,AT5G66550,AT5G19850,AT4G34160,AT1G63310,AT5G15210,AT5G57960,AT1G29520,AT5G59770,AT4G18670,AT5G43430,AT3G53730,AT2G46090,AT2G01910,AT3G56340,AT3G01960,AT5G15930,AT3G28420,AT3G27050,AT5G28050,AT5G59480,AT3G53950,AT1G60010,AT2G01830,AT5G19940,AT4G30290,AT5G06340,AT5G08410,AT1G01770,AT4G40045,AT1G29950,AT4G29220,AT5G09820,AT5G15520,AT1G77460,AT2G42740,AT3G18800,AT4G27435,AT3G50270,AT5G52110,AT3G15900,AT5G47380,AT5G64300,AT1G29460,AT2G03390,AT5G49100,AT5G14220,AT1G10960,AT1G49730,AT1G71050,AT1G71790,AT3G29200,AT5G28750,AT1G70710,AT3G03980,AT3G54900,AT5G63470,AT3G61210,AT3G16770,AT5G59690,AT1G01225,AT1G68780,AT5G55620,AT1G71020,AT3G50660,AT2G03710,AT1G65420,AT3G59900,AT1G22885,AT1G30690,AT4G33760,AT2G44230,AT3G15540,AT5G17840,AT5G54180,AT4G24280,AT5G05890,AT1G25290,AT4G38840,AT4G31840,AT3G50560,AT3G48720,AT1G74370,AT4G14100,AT2G32290,AT5G27450,AT2G01620,AT5G39860,AT4G00755,AT3G20270,AT4G32320,AT5G15160,AT4G01350,AT4G16410,AT4G30996,AT4G38850,AT3G56680,AT2G24170,AT5G44050,AT4G17540,AT1G73530,AT5G09240,AT2G35650,AT4G32190,AT3G44620,AT2G22980,AT3G02900,AT3G53470,AT3G17210,AT3G53920,AT1G63240,AT5G20140,AT5G22310,AT3G56130,AT3G55005,AT3G51420,AT4G02060,AT4G28030,AT3G12920,AT4G04955,AT1G33290,AT3G62390,AT5G16140,AT3G17470,AT5G44520,AT1G11580,AT3G45050,AT1G22630,AT3G04630,AT5G24800,AT4G35440,AT5G47110,AT3G63510,AT4G00895,AT1G58270,AT4G14440,AT5G04900,AT4G36540,AT1G44830,AT5G45830,AT5G35490,AT3G55500,AT5G01210,AT4G30825,AT3G55420,AT3G02180,AT2G33255,AT5G45280,AT1G10360,AT4G30610,AT4G26555,AT5G51110,AT2G29300,AT3G56010,AT4G32590,AT5G10620,AT1G35420,AT2G42870,AT3G06470,AT4G24340,AT4G37330,AT1G15580,AT4G14870,AT5G27820,AT5G62980,AT3G46610,AT1G29980,AT2G16060,AT1G21350,AT1G07440,AT4G00880,AT1G05385,AT3G14760,AT5G36170,AT1G02280,AT5G02120,AT1G62290,AT4G10300,AT1G64860,AT1G18170,AT5G22300,AT3G23470,AT3G47295,AT3G49470,AT3G01680,AT4G37550,AT2G26340,AT5G66520,AT1G79700,AT4G13670,AT1G51400,AT5G06710,AT2G18710,AT2G41820,AT5G44785,AT5G13770,AT2G04032,AT4G17030,AT4G25260,AT5G14370,AT3G60210,AT2G40940,AT1G04640,AT5G25350,AT5G54600,AT4G19840,AT4G09350,AT1G54500,AT2G34930,AT2G17033,AT5G53880,AT4G11175,AT4G24510,AT5G15580,AT5G17870,AT1G12250,AT1G67830,AT5G04190,AT3G61080,AT1G23750,AT3G12685,AT1G44446,AT2G41720,AT4G32460,AT5G17230,AT5G55250,AT5G42240,AT5G67260,AT1G69040,AT4G14930,AT2G35370,AT5G62165,AT5G52780,AT2G47910,AT1G20190,AT3G01660,AT5G42070,AT3G62410,AT1G75350,AT1G78450,AT1G77060,AT5G23060,AT5G53860,AT4G01050,AT3G47070,AT5G51540,AT4G24350,AT1G60550,AT2G05310,AT1G35180,AT5G65220,AT4G19985,AT3G22210,AT4G05090,AT1G55480,AT2G04790,AT2G01870,AT2G34860,AT1G68540,AT3G25480,AT3G55250,AT1G18400,AT1G20810,AT3G12710,AT1G78180,AT2G24020,AT3G21055,AT5G17670,AT5G56850,AT3G45850,AT5G64380,AT2G39700,AT3G47650,AT1G66820,AT1G14890,AT3G26200,AT1G76450,AT2G15830,AT1G22690,AT1G60260,AT4G01800,AT1G17100,AT1G64355,AT2G20260,AT1G19720,AT5G55740,AT1G76100,AT2G35260,AT4G20130,AT5G18460,AT5G24420,AT1G04420,AT3G56910,AT3G17040,AT1G08390,AT1G06640,AT5G52960,AT1G29500,AT2G44080,AT5G20935,AT1G43790,AT3G22150,AT1G62480,AT4G33000,AT1G31920,AT5G57170,AT2G44920,AT3G25805,AT3G23760,AT1G78970,AT4G38160,AT1G52220,AT1G64150,AT2G29290,AT2G03750,AT3G23880,AT3G09050,AT3G20680,AT3G47560,AT3G59400,AT1G78995,AT1G30520,AT4G31290,AT1G60600,AT1G18730,AT2G13820,AT1G31710,AT1G71720,AT5G01920,AT5G07030,AT5G03940,AT2G17880,AT1G48350,AT3G26960,AT5G14910,AT3G56650,AT1G59840,AT2G32860,AT4G18370,AT5G02710,AT3G19800,AT3G09580,AT4G29060,AT4G24930,AT1G01080,AT1G26220,AT5G58310,AT1G70760,AT1G49975,AT1G55370,AT4G17560,AT4G18440,AT4G19100,AT5G50335,AT3G61870,AT5G02160,AT4G12970,AT5G12940,AT2G43550,AT4G39710,AT5G45040,AT5G22460,AT5G02540,AT4G34770,AT5G23820,AT1G22590,AT4G12830,AT3G16670,AT5G39210,AT5G13730,AT5G52100,AT1G22430,AT1G27480,AT1G73830,AT2G29180,AT5G58260,AT3G21950,AT5G52970,AT3G01440,AT2G40100,AT2G40670,AT1G62780,AT5G13140,AT1G06080,AT2G34620,AT4G15210,AT1G14250 KEMPEMA_SLWF-2-3-INSTAR-FEEDING_UP Up-responsive to SLWF second- and third-instar feeding (Table 1 PubmedID:17189325) AT3G44300,AT1G20620,AT3G28890,AT5G40370,AT1G07890,AT3G17820,AT1G71880,AT5G37600,AT5G01850,AT5G10740,AT1G05570,AT1G72680,AT2G39660,AT5G48380,AT3G49120,AT4G19420,AT2G02810,AT4G16260,AT4G34230,AT5G20230,AT1G10340,AT4G15680,AT2G37130,AT1G35230,AT4G23140,AT4G25000,AT2G32680,AT1G09240,AT1G03850,AT3G13790,AT2G45220,AT1G51890 KEMPEMA_SLWF-2-3-INSTAR-FEEDING_DN Down-responsive to SLWF second- and third-instar feeding (Table 1 PubmedID:17189325) AT4G19500,AT4G18670,AT4G32320,AT3G63510,AT3G55500,AT5G22300,AT4G19840,AT1G12250,AT1G44446,AT1G20190,AT3G55250,AT3G21055,AT2G39700,AT2G20260,AT2G44920,AT5G01920,AT5G12940,AT5G45040,AT4G15210 KEMPEMA_SA-JA-ET-DEFENSE-SLWF_UP Up-expression of SA-, JA-, and ET-defense and -biosynthesis pathway genes in response to SLWF second- and third-instar feeding (Table 2 PubmedID:17189325) AT1G72260,AT2G46370,AT3G23240,AT5G06950,AT5G42650,AT5G03280,AT1G66340,AT4G01370,AT2G06050,AT1G64280,AT3G45140,AT3G15730,AT2G39940,AT1G08720,AT3G48090,AT3G25780,AT3G56400,AT3G20770,AT3G04720,AT1G02450,AT4G39030,AT3G52430,AT1G74710,AT1G75040,AT2G14610,AT3G57260 KEMPEMA_SA-JA-ET-DEFENSE-SLWF_DN Down-expression of SA-, JA-, and ET-defense and -biosynthesis pathway genes in response to SLWF second- and third-instar feeding (Table 2 PubmedID:17189325) AT2G43710,AT3G25760,AT3G12120,AT5G05170,AT1G09415,AT1G19640,AT5G03730,AT3G11170,AT5G24780,AT2G29980,AT5G44420 KEMPEMA_SLWF_UP Up-expression levels of glucosinolate-metabolism and primary sulfur-metabolism genes in response to SLWF (Table 3 PubmedID:17189325) AT3G45070,AT3G22890,AT1G24100,AT2G17640,AT5G56760,AT4G21990,AT5G28030,AT3G13110,AT1G62180,AT4G03070,AT5G20980,AT1G74100,AT5G67520,AT5G28020,AT5G07010,AT1G55920,AT4G31500,AT3G22460,AT5G23020,AT5G43780,AT4G39950 KEMPEMA_SLWF_DN Down-expression levels of glucosinolate-metabolism and primary sulfur-metabolism genes in response to SLWF (Table 3 PubmedID:17189325) AT4G14880,AT4G04610,AT2G14750,AT5G04590,AT2G14920,AT5G27380,AT3G57050,AT2G22330,AT4G23100,AT1G16410,AT3G03900,AT4G13770,AT4G39940,AT3G03780,AT5G23010,AT3G03630,AT2G03760,AT3G01120,AT4G03060,AT3G04940,AT1G54040,AT1G74090,AT1G19920,AT4G14680,AT5G25980,AT2G43750,AT3G59760,AT5G07000,AT2G03750 KEMPEMA_MP_UP Up-expression levels of glucosinolate-metabolism and primary sulfur-metabolism genes in response to MP (Table 3 PubmedID:17189325) AT4G23100,AT5G56760,AT2G27570,AT2G17640,AT5G43780,AT1G55880,AT3G03630,AT5G20980,AT5G43690,AT2G03770,AT4G35640,AT2G03760,AT3G45070,AT4G03050,AT5G25980,AT1G33320,AT1G28170,AT5G05260,AT4G26280,AT3G22460,AT5G27380,AT1G55920 KEMPEMA_MP_DN Down-expression levels of glucosinolate-metabolism and primary sulfur-metabolism genes in response to MP (Table 3 PubmedID:17189325) AT4G14880,AT3G57050,AT2G22330,AT3G22890,AT4G31500,AT2G03750,AT3G59760,AT1G13420,AT3G04940,AT1G54040,AT4G14680,AT5G07000,AT2G43750,AT3G03900,AT5G67520,AT5G23010,AT5G04590,AT3G01120,AT4G39950,AT2G20610,AT3G03780,AT5G23020,AT4G21990,AT2G14920,AT4G39940,AT1G19920,AT3G13110,AT1G74100,AT4G13770,AT4G03070,AT1G16410,AT1G16400,AT2G14750,AT5G28020,AT1G24100,AT5G07010,AT1G18590,AT1G74090,AT4G04610,AT4G03060,AT1G62180,AT5G28030 KEMPEMA_EC_UP Up-expression levels of glucosinolate-metabolism and primary sulfur-metabolism genes in response to EC (Table 3 PubmedID:17189325) AT5G28030,AT3G03780,AT3G01120,AT3G45070,AT4G14680,AT5G04590,AT1G74090,AT3G22890,AT5G23010,AT4G21990,AT4G14880,AT2G22330,AT4G26280,AT3G57050,AT2G20610,AT5G27380,AT2G03760,AT1G55880,AT3G03900,AT1G74100,AT5G25980,AT3G59760,AT4G35640,AT1G24100,AT3G13110,AT2G14750,AT5G43780,AT4G39940,AT1G18590,AT5G05260,AT5G23020,AT4G31500,AT2G03770,AT4G39950 KEMPEMA_EC_DN Down-expression levels of glucosinolate-metabolism and primary sulfur-metabolism genes in response to EC (Table 3 PubmedID:17189325) AT3G22460,AT4G03060,AT2G17640,AT4G03070,AT4G23100,AT4G13770,AT1G16410,AT1G16400,AT3G03630,AT4G03050,AT2G27570,AT1G28170,AT1G19920,AT4G04610,AT2G14920,AT5G07000,AT5G56760,AT5G43690,AT1G33320,AT2G03750,AT2G43750,AT5G20980,AT1G54040,AT1G62180,AT1G55920,AT5G28020,AT3G04940,AT5G67520,AT5G07010,AT1G13420 KEMPEMA_PR_UP Up-expression levels of glucosinolate-metabolism and primary sulfur-metabolism genes in response to PR (Table 3 PubmedID:17189325) AT2G43750,AT1G62180,AT2G03750,AT4G21990,AT4G03070,AT5G25980,AT5G07010,AT4G23100,AT4G14880,AT3G57050,AT5G27380,AT1G55880,AT2G27570,AT3G01120,AT3G03780,AT5G28030,AT5G20980,AT3G03630,AT2G03760,AT1G33320,AT5G43780,AT5G05260,AT3G03900,AT5G04590,AT4G35640,AT5G23020,AT4G31500,AT1G24100,AT2G20610,AT1G74100,AT3G13110,AT1G28170,AT4G14680,AT1G74090,AT3G22890,AT5G56760,AT3G59760,AT4G13770,AT4G26280,AT5G23010,AT2G14750,AT4G04610,AT3G45070,AT4G39950,AT4G03060,AT1G18590,AT5G67520,AT2G22330,AT4G39940,AT1G16410,AT1G16400,AT1G54040,AT4G03050,AT1G13420,AT5G43690,AT2G03770 KEMPEMA_PR_DN Down-expression levels of glucosinolate-metabolism and primary sulfur-metabolism genes in response to PR (Table 3 PubmedID:17189325) AT3G22460,AT1G19920,AT5G28020,AT2G17640,AT5G07000,AT2G14920,AT1G55920,AT3G04940 ZHANG_GH3.5-1D/WT_UP Up-regulated genes in uninfected gh3.5-1D versus wild-type plants (Table S2 PubmedID:17704230) rps12.1,psbD,psaA,ATpF,AT1G51140,AT5G28300,AT5G19470,AT5G20280,AT1G31690,AT5G26570,AT5G26360,AT5G24800,AT5G62190,AT5G59320,AT5G57350,AT5G55400,AT5G55220,AT5G54190,AT5G53450,AT5G52920,AT5G52310,AT5G52300,AT5G51750,AT5G50310,AT5G48960,AT5G47020,AT5G46240,AT5G44530,AT5G43810,AT5G23660,AT5G22500,AT5G16505,AT5G07340,AT5G07010,AT5G03940,AT5G02810,AT5G02540,AT3G62700,AT3G61780,AT3G55610,AT3G55500,AT3G50970,AT3G50240,AT3G47340,AT3G44970,AT4G35790,AT4G34000,AT4G32910,AT4G30720,AT4G30790,AT4G30650,AT4G29020,AT4G28250,AT4G27440,AT4G27260,AT4G25500,AT4G18600,AT4G18820,AT4G01120,AT1G58270,AT3G13490,AT3G19100,AT3G18290,AT3G20250,AT3G21950,AT1G69040,AT3G22380,AT3G22440,AT3G04340,AT3G02860,AT3G01960,AT3G07360,AT3G01320,AT1G20450,AT1G20440,AT1G76580,AT1G68470,AT1G68220,AT1G62390,AT1G48090,AT1G06080,AT1G75450,AT1G12845,AT1G52980,AT1G18870,AT1G80680,AT1G64660,AT1G33811,AT1G56170,AT2G01100,AT1G74850,AT1G50280,AT1G62710,AT1G10760,AT2G04160,AT2G22240,AT1G04400,AT2G36390,AT2G22400,AT1G60190,AT1G04120,AT1G70300,AT1G67120,AT1G09570,AT1G05200,AT2G17840,AT1G24190,AT1G27030,AT1G27210,AT2G18050,AT2G15090,AT2G37870,AT2G29140,AT2G46680,AT2G44900,AT2G26330,AT2G45540 ZHANG_GH3.5-1D/WT_DN Down-regulated genes in uninfected gh3.5-1D versus wild-type plants (Table S2 PubmedID:17704230) AT4G15800,AT4G16515,AT4G17460,AT4G15680,AT4G14560,AT4G15690,AT4G15700,AT5G09220,AT4G37240,AT4G37180,AT4G36500,AT5G25460,AT5G67600,AT5G66590,AT5G65870,AT5G65670,AT5G65730,AT5G64770,AT5G64780,AT5G62280,AT5G58570,AT5G54120,AT5G54130,AT5G53200,AT5G52750,AT5G49480,AT5G48540,AT5G47370,AT5G44420,AT5G44020,AT5G39860,AT5G36910,AT5G24660,AT5G22580,AT5G19240,AT5G22390,AT5G18600,AT5G18060,AT5G17280,AT5G11650,AT5G05960,AT5G05370,AT5G04950,AT5G03530,AT5G03120,AT3G57450,AT3G56290,AT3G52740,AT3G52720,AT3G49580,AT3G46460,AT3G45860,AT3G45970,AT3G45160,AT3G44450,AT4G38860,AT4G38850,AT4G38840,AT4G37800,AT4G34600,AT4G34760,AT4G32870,AT4G30270,AT4G25830,AT4G25420,AT4G21870,AT4G19200,AT4G08300,AT4G08290,AT4G05590,AT4G04830,AT4G00050,AT1G07090,AT1G69530,AT3G11110,AT1G75250,AT1G66100,AT1G33340,AT3G22240,AT3G22231,AT3G22210,AT3G13520,AT3G16530,AT3G21890,AT2G26020,AT2G40750,AT1G29440,AT3G23030,AT3G23050,AT3G26960,AT3G28940,AT3G28930,AT3G29030,AT3G21260,AT3G14560,AT3G03000,AT3G04720,AT3G03190,AT3G05490,AT3G03840,AT3G03830,AT3G16370,AT1G55265,AT1G55330,AT1G63090,AT1G64360,AT1G29500,AT1G29510,AT1G29450,AT1G29460,AT1G29430,AT1G75040,AT1G67860,AT1G67865,AT1G69780,AT1G72430,AT1G06830,AT1G19960,AT1G20070,AT1G44800,AT1G07610,AT1G63460,AT1G15580,AT1G02820,AT1G70985,AT1G70890,AT1G14870,AT1G59930,AT1G75750,AT1G78450,AT2G24762,AT2G21650,AT1G04250,AT2G36885,AT2G36220,AT2G31230,AT1G65490,AT1G08830,AT1G67340,AT1G76960,AT1G27130,AT1G04040,AT1G03870,AT2G43060,AT2G40100,AT2G14560,AT2G06850,AT2G29340,AT2G46650,AT2G43100,AT2G19760,AT2G30010,AT2G38480,AT2G41110,AT2G32560,AT2G30930 ZHANG_PST-DC3000-GH3.5-1D/WT_UP Up-regulated genes in Pst DC3000 (avrRpt2)-infected gh3.5-1D versus wild-type plants (Table S3 PubmedID:17704230) rps12.2,psaA,AT2G23170,AT2G41640,AT2G47600,AT2G45220,AT2G33150,AT4G17230,AT4G17500,AT4G15210,AT4G15610,AT4G16260,AT4G14090,AT4G14160,AT1G56650,AT5G04340,AT1G73540,AT1G47128,AT5G09440,AT5G13080,AT5G20830,AT5G20960,AT4G36760,AT4G37260,AT1G31830,AT1G16670,AT3G44880,AT1G51890,AT5G16910,AT5G35370,AT5G33290,AT5G27420,AT5G26920,AT5G26570,AT5G26340,AT5G25770,AT5G25260,AT5G67310,AT5G67480,AT5G67630,AT5G67160,AT5G66760,AT5G66400,AT5G65110,AT5G65300,AT5G64570,AT5G64310,AT5G63970,AT5G64120,AT5G63790,AT5G62680,AT5G61820,AT5G61600,AT5G60300,AT5G59820,AT5G59220,AT5G58350,AT5G57910,AT5G57580,AT5G57655,AT5G56870,AT5G57050,AT5G55180,AT5G54960,AT5G54510,AT5G54060,AT5G53820,AT5G52310,AT5G51640,AT5G51070,AT5G50380,AT5G50360,AT5G50760,AT5G48180,AT5G46180,AT5G45900,AT5G46050,AT5G44790,AT5G44380,AT5G44480,AT5G43580,AT5G43060,AT5G42800,AT5G40690,AT5G39520,AT5G39610,AT5G39050,AT5G38710,AT5G35735,AT5G24470,AT5G24090,AT5G24260,AT5G23660,AT5G23240,AT5G22860,AT5G18130,AT5G17860,AT5G17380,AT5G15190,AT5G13930,AT5G13820,AT5G13800,AT5G13330,AT5G11520,AT5G10300,AT5G09530,AT5G07920,AT5G07440,AT5G07010,AT5G07100,AT5G05730,AT5G05410,AT5G05600,AT5G05340,AT5G04540,AT5G03240,AT5G02480,AT3G62590,AT3G63010,AT3G61190,AT3G60130,AT3G60140,AT3G59930,AT3G58570,AT3G57510,AT3G57520,AT3G55910,AT3G55970,AT3G55310,AT3G55270,AT3G55450,AT3G53230,AT3G52400,AT3G51440,AT3G51330,AT3G50970,AT3G50910,AT3G49620,AT3G49120,AT3G49210,AT3G48650,AT3G48520,AT3G47960,AT3G47780,AT3G47340,AT3G46620,AT3G46670,AT3G46660,AT3G46440,AT3G45300,AT3G44260,AT4G39950,AT4G39450,AT4G39670,AT4G39270,AT4G39140,AT4G37990,AT4G38540,AT4G37370,AT4G37320,AT4G37430,AT4G36010,AT4G35630,AT4G34710,AT4G34135,AT4G34200,AT4G33540,AT4G33150,AT4G33050,AT4G32250,AT4G31800,AT4G31240,AT4G31550,AT4G30190,AT4G28490,AT4G28040,AT4G27830,AT4G27410,AT4G27260,AT4G26270,AT4G26080,AT4G25480,AT4G25470,AT4G25000,AT4G24570,AT4G24690,AT4G24220,AT4G24120,AT4G24000,AT4G24040,AT4G23700,AT4G23680,AT4G23190,AT4G23050,AT4G22870,AT4G22780,AT4G22470,AT4G22590,AT4G21580,AT4G21680,AT4G20830,AT4G20860,AT4G21120,AT4G20110,AT4G19960,AT4G19810,AT4G18980,AT4G13790,AT4G18010,AT4G13180,AT4G13250,AT4G13410,AT4G12500,AT4G12280,AT4G11890,AT4G11650,AT4G11280,AT4G09030,AT4G05100,AT4G03320,AT4G02380,AT4G02280,AT4G01870,AT4G01430,AT4G00700,AT2G33380,AT5G34940,AT1G19270,AT1G19180,AT1G58270,AT1G58360,AT1G07040,AT1G51780,AT1G69440,AT1G66500,AT1G66830,AT3G10930,AT1G75170,AT1G75300,AT3G28210,AT3G28290,AT3G25610,AT3G16860,AT3G22200,AT3G13790,AT3G13672,AT3G23920,AT3G22620,AT3G19580,AT3G20250,AT3G27210,AT3G14990,AT3G28007,AT2G28890,AT3G21520,AT3G29250,AT3G18830,AT3G42570,AT3G21230,AT3G26090,AT3G17820,AT3G17810,AT3G21500,AT3G14050,AT3G26840,AT3G26830,AT3G15500,AT3G02480,AT3G06810,AT3G02875,AT3G08720,AT3G08760,AT3G04010,AT3G04070,AT3G04060,AT3G10500,AT3G01420,AT3G08870,AT3G08860,AT3G09260,AT3G09220,AT3G03480,AT3G03470,AT3G05400,AT3G10320,AT3G11430,AT3G05360,AT1G17745,AT1G13340,AT1G01480,AT1G02400,AT1G15670,AT1G20450,AT1G20630,AT1G20440,AT1G48000,AT1G76790,AT1G76650,AT1G76390,AT1G72680,AT1G67960,AT1G67980,AT1G73805,AT1G73260,AT1G33960,AT1G66400,AT1G66390,AT1G52890,AT1G74590,AT1G63720,AT1G69260,AT1G74020,AT1G69930,AT1G69880,AT1G69870,AT1G69610,AT2G41850,AT2G43820,AT2G43570,AT2G47190,AT1G55920,AT1G32450,AT1G32350,AT1G21400,AT1G02470,AT1G26420,AT1G26410,AT1G26390,AT1G26380,AT1G17380,AT1G17420,AT1G07430,AT1G32940,AT1G32960,AT1G44800,AT1G53100,AT1G28400,AT1G14370,AT1G49720,AT1G27730,AT1G18380,AT1G15520,AT1G08230,AT1G22400,AT1G22570,AT1G64660,AT1G80160,AT1G52690,AT1G77900,AT1G53910,AT1G74930,AT1G68620,AT1G48370,AT1G64170,AT1G72900,AT1G11210,AT1G17020,AT1G21670,AT1G21680,AT1G15380,AT1G06520,AT1G62763,AT1G14250,AT1G59740,AT1G65690,AT2G17500,AT1G03080,AT1G54100,AT1G10585,AT1G30720,AT1G30700,AT1G05680,AT2G14170,AT2G03850,AT2G40140,AT2G04100,AT2G04160,AT2G31810,AT2G31945,AT2G21620,AT1G26930,AT2G37040,AT2G36380,AT2G35930,AT2G35980,AT2G42760,AT2G42790,AT2G22500,AT2G22470,AT1G02220,AT1G54570,AT1G60190,AT1G60140,AT1G09240,AT1G61820,AT1G04220,AT1G04120,AT1G70300,AT1G03220,AT1G61800,AT1G43160,AT1G61810,AT1G27300,AT1G10410,AT1G09560,AT1G09530,AT1G09500,AT1G10070,AT1G55760,AT1G05340,AT1G08940,AT1G09970,AT1G62300,AT1G22930,AT2G17840,AT1G23040,AT1G60740,AT1G60730,AT1G77120,AT1G76930,AT1G27200,AT1G52040,AT1G52080,AT1G03495,AT1G23800,AT2G36770,AT2G28400,AT2G18090,AT2G18050,AT2G25730,AT2G25625,AT2G24180,AT2G05940,AT2G37870,AT2G39030,AT2G28110,AT2G38940,AT2G02220,AT2G29460,AT2G29470,AT2G29350,AT2G46680,AT2G41380,AT2G38760,AT2G47770,AT2G46270,AT2G02870,AT2G44840,AT2G30020,AT2G29990,AT2G29940,AT2G18950,AT2G39330,AT2G39200,AT2G39210,AT2G34500,AT2G39350,AT2G38340,AT2G38400,AT2G23450,AT2G38240,AT2G37770,AT2G37750,AT2G23150,AT2G19450,AT2G30140,AT2G44500,AT2G34810,AT2G19190,AT2G30550,AT2G45510,AT2G45570,AT2G30750,AT2G30770 ZHANG_PST-DC3000-GH3.5-1D/WT_DN Down-regulated genes in Pst DC3000 (avrRpt2)-infected gh3.5-1D versus wild-type plants (Table S3 PubmedID:17704230) AT2G45190,AT2G45450,AT2G33180,AT4G16985,AT4G17460,AT4G17810,AT4G14560,AT4G15920,AT1G30260,AT1G26100,AT5G20740,AT5G20180,AT5G20090,AT5G20935,AT4G36540,AT3G56910,AT3G44890,AT5G15830,AT1G50730,AT5G27700,AT5G25460,AT5G67070,AT5G66590,AT5G66550,AT5G65880,AT5G65730,AT5G64770,AT5G64816,AT5G64140,AT5G63180,AT5G62100,AT5G61310,AT5G61130,AT5G59850,AT5G58570,AT5G58310,AT5G57780,AT5G57785,AT5G57290,AT5G57170,AT5G56600,AT5G56670,AT5G55620,AT5G56100,AT5G53200,AT5G52650,AT5G52190,AT5G51720,AT5G50915,AT5G50810,AT5G48490,AT5G47930,AT5G47700,AT5G47870,AT5G45950,AT5G45940,AT5G45680,AT5G45040,AT5G44680,AT5G44130,AT5G44420,AT5G44020,AT5G42070,AT5G41050,AT5G39860,AT5G35490,AT5G24570,AT5G24165,AT5G22580,AT5G22390,AT5G18790,AT5G18600,AT5G18060,AT5G17870,AT5G17670,AT5G15230,AT5G15160,AT5G14410,AT5G14105,AT5G12050,AT5G11420,AT5G10620,AT5G09830,AT5G08040,AT5G08050,AT5G07020,AT5G05960,AT5G03850,AT5G03530,AT5G03345,AT5G03120,AT5G02120,AT5G01650,AT5G01015,AT3G63120,AT3G62950,AT3G59650,AT3G59540,AT3G57040,AT3G56290,AT3G54900,AT3G53890,AT3G52720,AT3G51600,AT3G50560,AT3G49580,AT3G48720,AT3G48550,AT3G47836,AT3G47650,AT3G47430,AT3G47490,AT3G47510,AT3G47070,AT3G46560,AT3G45860,AT3G45050,AT3G44990,AT3G45160,AT3G44735,AT3G44020,AT3G43720,AT4G39710,AT4G39970,AT4G39300,AT4G39235,AT4G38860,AT4G38850,AT4G38840,AT4G38490,AT4G37800,AT4G35950,AT4G34760,AT4G34190,AT4G33865,AT4G33000,AT4G30996,AT4G30220,AT4G29735,AT4G28660,AT4G28270,AT4G26790,AT4G25890,AT4G25740,AT4G25050,AT4G24780,AT4G23820,AT4G22830,AT4G22620,AT4G22570,AT4G21870,AT4G21850,AT4G20870,AT4G19830,AT4G13520,AT4G12980,AT4G12730,AT4G12880,AT4G12970,AT4G12600,AT4G09890,AT4G09550,AT4G08685,AT4G08330,AT4G04630,AT4G04840,AT4G04830,AT4G00810,AT4G00410,AT4G00360,AT4G00400,AT1G18620,AT1G18650,AT4G10270,AT2G40610,AT1G07070,AT1G20816,AT1G48750,AT3G12610,AT1G69530,AT1G72030,AT1G66820,AT3G11120,AT3G11110,AT1G75250,AT3G19550,AT3G52360,AT3G27160,AT3G22210,AT3G21870,AT3G23760,AT3G23805,AT3G21890,AT2G26020,AT1G80850,AT1G29440,AT3G13845,AT3G26510,AT3G12685,AT3G18740,AT3G23030,AT3G23050,AT3G26960,AT3G17120,AT3G17100,AT3G20820,AT3G29030,AT3G21260,AT3G16240,AT3G16250,AT3G18050,AT3G27690,AT3G14395,AT3G17210,AT3G16660,AT3G16690,AT3G17350,AT3G06070,AT3G06035,AT3G06680,AT3G06750,AT3G07910,AT3G10720,AT3G04730,AT3G07230,AT3G05730,AT3G10080,AT3G01980,AT3G01860,AT3G07470,AT3G05000,AT3G04790,AT3G11510,AT3G11500,AT3G03840,AT1G69160,AT3G16370,AT1G01620,AT1G19050,AT1G56500,AT1G55260,AT1G55330,AT1G29500,AT1G29510,AT1G29450,AT1G29660,AT1G29460,AT1G29670,AT1G29430,AT1G72170,AT1G75040,AT1G67865,AT1G68780,AT1G73830,AT1G73177,AT1G74670,AT1G72430,AT1G10960,AT2G43460,AT1G55960,AT1G06830,AT1G21500,AT1G29250,AT1G29070,AT1G06010,AT1G20190,AT1G05385,AT1G07770,AT1G28395,AT1G14450,AT1G14290,AT1G01170,AT1G49975,AT1G08390,AT1G80760,AT1G22590,AT1G35612,AT1G80050,AT1G02820,AT1G77940,AT1G74730,AT2G01090,AT1G68590,AT1G70985,AT1G70890,AT1G49410,AT1G34640,AT1G17200,AT1G31335,AT1G14150,AT1G59930,AT1G75750,AT1G75690,AT2G05310,AT1G78460,AT1G10522,AT1G10470,AT2G24762,AT2G03870,AT2G20490,AT2G20450,AT2G04039,AT2G28605,AT2G21650,AT2G25210,AT2G16280,AT2G04795,AT1G04240,AT1G04250,AT1G04480,AT2G04790,AT1G31160,AT2G20585,AT2G35960,AT2G21210,AT2G21195,AT1G78995,AT1G54630,AT1G22690,AT1G22630,AT1G70350,AT1G27435,AT1G10030,AT1G65490,AT1G23100,AT2G17300,AT1G67330,AT1G04040,AT1G03870,AT1G23480,AT2G05790,AT2G10940,AT2G32060,AT2G32090,AT2G03420,AT2G40100,AT2G32100,AT2G15050,AT2G02130,AT2G39010,AT2G06850,AT2G27775,AT2G29180,AT2G27130,AT2G01590,AT2G14660,AT2G16850,AT2G28950,AT2G29980,AT2G44740,AT2G39500,AT2G38480,AT2G32500,AT2G38140,AT2G32560,AT2G45710,AT2G32650 ZHANG_SA_GH3.5-1D_48HPI_PST-DC3000_UP Induced-SA that selected defense-related genes that are significantly induced in gh3.5-1D at 48 hpi with Pst DC3000(avrRpt2) (Table 2 PubmedID:17704230) AT3G01420,AT4G34135,AT2G43820,AT1G62300,AT4G31550,AT4G31800,AT5G07100,AT5G13080,AT3G26830,AT2G37040 ZHANG_CELL-WALL_GH3.5-1D_PST-DC3000_UP Induced-Cell wall modification that selected defense-related genes that are significantly induced in gh3.5-1D at 48 hpi with Pst DC3000(avrRpt2) (Table 2 PubmedID:17704230) AT5G56870,AT2G43570,AT1G76930,AT1G61810,AT4G27830,AT3G60130,AT4G16260,AT3G09260,AT3G60140,AT5G55180,AT3G04010,AT4G19810,AT1G23040,AT4G22470,AT5G64120,AT5G05340,AT3G49120,AT2G45220 ZHANG_NO-CELL-WALL_GH3.5-1D_PST-DC3000_UP Induced-Other defense related that selected defense-related genes that are significantly induced in gh3.5-1D at 48 hpi with Pst DC3000(avrRpt2) (Table 2 PubmedID:17704230) AT2G19190,AT5G13080,AT4G37990,AT3G44880,AT1G33960,AT4G11650,AT2G29460,AT2G29470,AT1G69930,AT1G74590,AT1G65690,AT2G39200,AT1G72900,AT3G05360 ZHANG_OTHER-DEFENSE_GH3.5-1D_48HPI_PST-DC3000_DN Depressed-Other defense related that selected defense-related genes that are significantly induced in gh3.5-1D at 48 hpi with Pst DC3000(avrRpt2) (Table 2 PubmedID:17704230) AT5G44420 MALITSKY_MYB29_UP Up-regulated genes in MYB29 (Table S4 PubmedID:18829985) AT5G07690,AT3G22740,AT1G16400,AT1G16410,AT5G23010,AT5G23020,AT4G14680,AT4G03050,AT2G25450,AT3G12520,AT1G18590,AT4G39940,AT1G78000,AT2G20610,AT3G19710,AT4G23600,AT5G13550,AT2G14750,AT4G04610,AT1G31230,AT5G07700,AT1G36370,AT1G74090,AT4G13770,AT1G24100,AT3G57050,AT5G57590,AT4G21990,AT5G14060,AT3G02020,AT5G53460,AT5G10180,AT2G43360,AT2G17265,AT3G03780,AT5G17920,AT3G01120,AT1G54340,AT2G16370,AT4G34570,AT5G26780,AT1G14810,AT3G22890,AT4G13890,AT4G13930,AT4G34200,AT5G17990,AT1G11790,AT5G14590,AT1G25155,AT5G57890,AT1G24909,AT1G25083,AT1G25220,AT1G24807,AT4G31990,AT5G66760,AT5G43330,AT5G04590,AT4G32520,AT4G39540,AT2G35500,AT3G59760,AT5G04620,AT2G22780,AT4G19710,AT3G22200,AT1G23090,AT1G48850,AT5G19550,AT5G11520,AT1G74100,AT2G43750,AT3G06350,AT1G77990,AT2G41220,AT2G45300,AT1G48860,AT2G27150,AT2G04400,AT4G02610,AT3G01910,AT5G66120,AT3G44320,AT3G58750,AT5G05590,AT1G29410,AT1G07780,AT5G05980,AT5G05730,AT4G39980,AT3G44310,AT3G44300,AT4G03060,AT5G54810,AT4G27070,AT3G13110,AT5G20960,AT3G26830,AT5G60890,AT2G30770,AT3G44720 MALITSKY_MYB29_DN Down-regulated genes in MYB29 (Table S4 PubmedID:18829985) AT1G74080,AT4G03070,AT4G32540,AT5G22630,AT1G02500,AT1G18570,AT1G55920,AT2G24850,AT5G61420,AT5G65010,AT2G25680,AT1G80310,AT4G39950,AT5G43450,AT3G51895,AT2G22330,AT1G03400,AT4G31500 MALITSKY_MYB76_UP Up-regulated genes in MYB76 (Table S4 PubmedID:18829985) AT5G54810,AT4G27070,AT1G55920,AT5G60890,AT3G44310,AT3G44300,AT5G05980,AT2G45300,AT1G48860,AT4G39980,AT5G66120,AT2G41220,AT4G19710,AT5G05590,AT1G29410,AT1G07780,AT3G06350,AT3G58750,AT5G04590,AT1G23090,AT2G43750,AT3G44320,AT3G01910,AT4G02610,AT5G05730,AT1G48850,AT4G03060,AT5G19550,AT2G35500,AT2G04400,AT3G22200,AT5G66760,AT2G22780,AT3G59760,AT5G04620,AT5G14590,AT5G11520,AT4G31990,AT4G32520,AT2G27150,AT2G16370,AT4G34570,AT1G74100,AT5G17990,AT1G11790,AT4G39540,AT5G43330,AT5G07690,AT5G26780,AT5G20960,AT3G01120,AT1G54340,AT4G13890,AT4G13930,AT1G25155,AT5G57890,AT1G24909,AT1G25083,AT1G25220,AT1G24807,AT4G34200,AT3G03780,AT5G17920,AT5G53460,AT3G22890,AT5G23020,AT1G14810,AT2G43360,AT5G10180,AT1G77990,AT1G24100,AT4G21990,AT5G57590,AT2G17265,AT5G14060,AT3G02020,AT4G13770,AT3G57050,AT4G04610,AT5G13550,AT1G74090,AT1G36370,AT3G19710,AT2G14750,AT1G31230,AT1G18590,AT1G78000,AT2G20610,AT4G39940,AT4G14680,AT5G23010,AT4G03050,AT3G12520,AT2G25450,AT4G23600,AT1G16400,AT1G16410,AT3G22740,AT5G07700 MALITSKY_MYB76_DN Down-regulated genes in MYB76 (Table S4 PubmedID:18829985) AT5G61420,AT4G31500,AT1G03400,AT2G22330,AT3G51895,AT1G80310,AT4G39950,AT5G65010,AT2G25680,AT5G43450,AT1G18570,AT1G02500,AT3G44720,AT2G24850,AT5G22630,AT1G74080,AT2G30770,AT3G26830,AT4G03070,AT4G32540,AT3G13110 MALITSKY_MYB28_UP Up-regulated genes in MYB28-like cleadbb (Table S4 PubmedID:18829985) AT3G22740,AT1G16400,AT1G16410,AT5G07700,AT2G25450,AT5G23010,AT4G03050,AT3G12520,AT4G14680,AT4G23600,AT4G39940,AT1G18590,AT2G20610,AT1G78000,AT5G07690,AT3G19710,AT2G14750,AT1G31230,AT5G13550,AT5G23020,AT1G36370,AT1G74090,AT4G04610,AT4G13770,AT3G57050,AT1G24100,AT5G57590,AT5G14060,AT3G02020,AT4G21990,AT2G17265,AT5G10180,AT2G43360,AT5G53460,AT1G14810,AT3G03780,AT5G17920,AT3G22890,AT3G01120,AT1G54340,AT4G34200,AT5G26780,AT4G13890,AT4G13930,AT1G77990,AT2G16370,AT4G34570,AT1G25155,AT5G57890,AT1G24909,AT1G25083,AT1G25220,AT1G24807,AT5G17990,AT1G11790,AT5G43330,AT4G31990,AT5G14590,AT4G39540,AT4G32520,AT5G66760,AT1G74100,AT3G59760,AT5G04620,AT5G11520,AT2G22780,AT2G35500,AT3G22200,AT2G27150,AT5G19550,AT5G04590,AT1G48850,AT2G04400,AT1G23090,AT2G43750,AT4G19710,AT3G06350,AT4G02610,AT5G20960,AT3G01910,AT2G41220,AT5G05730,AT3G44320,AT3G58750,AT5G66120,AT2G45300,AT1G48860,AT5G05590,AT1G29410,AT1G07780,AT4G03060,AT4G39980,AT5G05980,AT3G44310,AT3G44300,AT5G54810,AT4G27070,AT5G60890,AT3G13110,AT3G26830 MALITSKY_MYB28_DN Down-regulated genes in MYB28-like cleadbb (Table S4 PubmedID:18829985) AT4G03070,AT4G32540,AT2G30770,AT1G74080,AT3G44720,AT1G55920,AT5G22630,AT2G24850,AT1G02500,AT1G18570,AT5G61420,AT2G25680,AT5G65010,AT5G43450,AT4G39950,AT1G80310,AT3G51895,AT2G22330,AT1G03400,AT4G31500 MALITSKY_MYB34_UP Up-regulated genes in MYB34 (Table S4 PubmedID:18829985) AT4G39950,AT5G60890,AT4G14680,AT2G22330,AT1G78000,AT1G18590,AT4G39940,AT3G22740,AT4G04610,AT4G31500,AT1G36370,AT5G17990,AT1G74100,AT2G04400,AT2G14750,AT4G39980,AT3G12520,AT3G59760,AT5G05730,AT5G43450,AT4G21990,AT1G77990,AT1G24100,AT2G20610,AT5G13550,AT4G34200,AT3G22890,AT5G54810,AT4G27070,AT1G48850,AT1G25155,AT5G57890,AT1G24909,AT1G25083,AT1G25220,AT1G24807,AT5G22630,AT3G13110,AT3G44720,AT3G06350,AT5G66120,AT5G10180,AT1G02500,AT5G57590,AT5G04590,AT5G05590,AT1G29410,AT1G07780,AT1G55920,AT4G23600,AT4G39540,AT2G43750,AT2G45300,AT1G48860,AT5G53460,AT1G74090,AT3G57050,AT5G05980,AT3G58750,AT5G19550,AT3G44320,AT4G13770,AT1G80310,AT2G22780,AT1G54340,AT5G11520,AT4G13890,AT4G13930,AT2G25450,AT5G23010,AT2G17265,AT3G03780,AT5G17920,AT4G02610,AT4G03070,AT3G19710,AT1G16400,AT1G16410,AT5G23020,AT3G01120,AT2G41220,AT5G14060,AT3G02020,AT5G20960,AT2G27150,AT3G01910,AT5G14590,AT4G32540,AT5G43330 MALITSKY_MYB34_DN Down-regulated genes in MYB34 (Table S4 PubmedID:18829985) AT1G74080,AT5G66760,AT1G03400,AT3G44310,AT3G44300,AT4G31990,AT3G22200,AT4G03060,AT5G26780,AT5G04620,AT2G30770,AT1G31230,AT5G07700,AT4G03050,AT1G11790,AT2G43360,AT1G18570,AT3G26830,AT5G07690,AT2G16370,AT4G34570,AT2G25680,AT3G51895,AT4G19710,AT4G32520,AT1G14810,AT5G65010,AT2G35500,AT2G24850,AT1G23090,AT5G61420 MALITSKY_MYB51_UP Up-regulated genes in MYB51 (Table S4 PubmedID:18829985) AT1G18570,AT1G18590,AT4G39950,AT2G22330,AT4G39940,AT4G14680,AT4G04610,AT4G31500,AT2G04400,AT1G74100,AT5G05730,AT1G24100,AT5G13550,AT5G17990,AT4G39980,AT2G20610,AT2G14750,AT3G59760,AT1G78000,AT4G21990,AT4G34200,AT3G13110,AT1G36370,AT1G25155,AT5G57890,AT1G24909,AT1G25083,AT1G25220,AT1G24807,AT5G54810,AT4G27070,AT1G48850,AT3G12520,AT1G02500,AT3G44720,AT5G04590,AT5G57590,AT3G06350,AT1G55920,AT3G22890,AT1G77990,AT5G43450,AT5G66120,AT3G22740,AT2G45300,AT1G48860,AT4G13890,AT4G13930,AT5G22630,AT5G05590,AT1G29410,AT1G07780,AT3G03780,AT5G17920,AT4G03070,AT1G80310,AT5G05980,AT3G57050,AT4G39540,AT3G44320,AT1G74090,AT5G53460,AT4G03050,AT2G43750,AT3G19710,AT4G13770,AT5G20960,AT1G54340,AT5G23020,AT1G16400,AT1G16410,AT2G43360,AT3G58750,AT5G10180,AT4G02610,AT2G17265,AT2G41220,AT3G01120,AT5G04620,AT5G66760,AT5G43330,AT5G19550,AT1G31230,AT2G22780,AT2G25450,AT2G16370,AT4G34570,AT1G74080,AT4G23600,AT5G26780 MALITSKY_MYB51_DN Down-regulated genes in MYB51 (Table S4 PubmedID:18829985) AT2G27150,AT4G03060,AT4G32540,AT3G51895,AT4G31990,AT1G14810,AT3G01910,AT1G11790,AT5G14590,AT2G30770,AT3G44310,AT3G44300,AT4G32520,AT5G07690,AT5G60890,AT5G11520,AT5G07700,AT2G25680,AT3G22200,AT4G19710,AT5G14060,AT3G02020,AT5G23010,AT5G65010,AT2G35500,AT3G26830,AT5G61420,AT1G03400,AT1G23090,AT2G24850 MALITSKY_ATR1_UP Up-regulated genes in atR1-like cleadc (Table S4 PubmedID:18829985) AT4G39950,AT1G18590,AT2G22330,AT4G14680,AT4G39940,AT4G04610,AT4G31500,AT1G78000,AT1G18570,AT2G04400,AT1G74100,AT5G05730,AT5G17990,AT4G39980,AT2G14750,AT1G36370,AT1G24100,AT2G20610,AT3G59760,AT3G22740,AT4G21990,AT5G13550,AT3G12520,AT5G60890,AT4G34200,AT5G43450,AT1G77990,AT1G25155,AT5G57890,AT1G24909,AT1G25083,AT1G25220,AT1G24807,AT3G13110,AT5G54810,AT4G27070,AT1G48850,AT3G22890,AT3G44720,AT1G02500,AT3G06350,AT5G04590,AT5G57590,AT5G22630,AT5G66120,AT1G55920,AT5G05590,AT1G29410,AT1G07780,AT2G45300,AT1G48860,AT5G10180,AT4G39540,AT3G57050,AT4G13890,AT4G13930,AT5G05980,AT1G74090,AT5G53460,AT2G43750,AT1G80310,AT3G03780,AT5G17920,AT4G03070,AT3G44320,AT4G23600,AT3G58750,AT5G19550,AT4G13770,AT1G54340,AT3G19710,AT2G22780,AT1G16400,AT1G16410,AT2G17265,AT4G02610,AT5G20960,AT5G23020,AT2G25450,AT2G41220,AT3G01120,AT4G03050,AT5G43330,AT5G66760,AT5G11520,AT2G27150,AT5G04620,AT1G74080,AT2G43360 MALITSKY_ATR1_DN Down-regulated genes in atR1-like cleadc (Table S4 PubmedID:18829985) AT5G23010,AT4G32540,AT3G01910,AT5G26780,AT1G31230,AT5G14590,AT5G14060,AT3G02020,AT4G03060,AT4G31990,AT3G44310,AT3G44300,AT2G16370,AT4G34570,AT3G22200,AT2G30770,AT1G11790,AT5G07700,AT5G07690,AT2G25680,AT3G51895,AT3G26830,AT4G19710,AT1G03400,AT1G14810,AT4G32520,AT5G65010,AT2G35500,AT5G61420,AT2G24850,AT1G23090 KLEINE_GROWTH-LIGHT-3H-PHOTON_WT_UP Up-regulated at least 2-fold after a shift from growth light (100 ?mol photons m-2 s-1) to 3 h 1000 ?mol photons m-2 s-1 in wild type (Table S1 PubmedID:17478635) AT1G52690,AT3G22840,AT4G14690,AT5G06760,AT2G47770,AT1G09500,AT1G60190,AT5G13170,AT2G33380,AT5G59220,AT3G46230,AT5G12020,AT3G46660,AT1G61800,AT5G59310,AT1G43160,AT5G52300,AT5G66400,AT4G33905,AT5G05220,AT3G02480,AT2G42540,AT3G17520,AT5G12030,AT4G31870,AT2G47780,AT5G53710,AT3G14440,AT1G02820,AT5G24080,AT1G52890,AT1G05100,AT2G29500,AT1G07430,AT2G41190,AT4G28140,AT4G27410,AT1G16850,AT1G71000,AT2G28400,AT2G34810,AT3G05640,AT2G42530,AT5G59320,AT2G37870,AT2G02990,AT3G29575,AT1G56650,AT1G69260,AT4G37990,AT5G05410,AT1G68620,AT1G66390,AT2G47180,AT3G28007,AT2G36750,AT1G27730,AT1G10370,AT1G57590,AT2G37770,AT1G05340,AT3G21890,AT5G04340,AT5G52310,AT5G51440,AT3G63060,AT1G10585,AT1G17870,AT3G12580,AT1G68500,AT4G05100,AT1G24600,AT1G61340,AT1G73390,AT3G51240,AT4G02360,AT5G24120,AT3G61890,AT3G24750,AT1G69480,AT4G18280,AT4G24000,AT1G77450,AT1G01470,AT1G56600,AT2G29460,AT4G39210,AT3G50970,AT2G39030,AT2G26150,AT5G01300,AT5G48570,AT4G37370,AT2G45570,AT5G52640,AT1G64660,AT1G80160,AT1G17420,AT3G23920,AT5G15190,AT1G73480,AT2G23910,AT5G01600,AT4G40010,AT2G33590,AT1G05680,AT1G20070,AT4G21680,AT4G37760,AT5G57050,AT1G07590,AT2G20880,AT5G07990,AT4G39670,AT1G54100,AT5G47330,AT3G09640,AT1G48100,AT2G46680,AT3G04000,AT5G54060,AT5G52570,AT4G12410,AT5G45630,AT5G01520,AT2G20560,AT1G20450,AT1G19180,AT1G74310,AT5G39050,AT2G21820,AT3G02140,AT5G37300,AT1G79520,AT4G09820,AT3G48520,AT5G53120,AT5G50360,AT4G15490,AT1G80840,AT1G21550,AT5G58770,AT3G22370,AT5G62210,AT5G13200,AT2G46270,AT4G30470,AT5G22460,AT2G36590,AT3G55500,AT4G32770,AT4G12400,AT2G36630,AT4G24960,AT4G37150,AT4G27657,AT1G66540,AT1G17830,AT5G50100,AT1G62570,AT3G48460,AT5G61820,AT1G06180,AT3G56290,AT4G34230,AT1G79270,AT4G26080,AT1G49450,AT1G51090,AT4G14090,AT4G02280,AT5G05600,AT3G57020,AT1G06430,AT3G53230,AT5G04250,AT2G32190,AT1G76570,AT1G01720,AT4G15480,AT2G21590,AT4G33550,AT3G29590,AT5G53970,AT1G78070,AT4G01870,AT5G17050,AT3G24500,AT2G24540,AT3G20300,AT1G76590,AT3G13672,AT4G25480,AT3G06500,AT5G63130,AT5G18130,AT2G22240,AT5G13330,AT3G28210,AT3G07700,AT4G02410,AT1G56170,AT2G34070,AT4G10960,AT5G17220,AT5G42760,AT1G61890,AT1G21460,AT3G11410,AT3G57520,AT1G69610,AT5G43450,AT4G36010,AT2G03760,AT5G42800,AT3G48510,AT5G44050,AT2G29090,AT3G62260,AT2G04350,AT2G25620,AT5G22860,AT1G06570,AT4G17550,AT1G04220,AT5G04380,AT1G65060,AT1G33260,AT3G13130,AT1G67920,AT1G01520,AT5G26340,AT1G02400,AT5G50800,AT3G57010,AT1G78510,AT3G17800,AT3G61630,AT4G13800,AT2G25625,AT3G24520,AT3G17610,AT5G20830,AT1G32870,AT2G29450,AT5G05270,AT1G32900,AT2G43570,AT2G29350,AT3G55120,AT1G20440,AT1G67360,AT5G54300,AT4G12580,AT1G23010,AT3G43270,AT1G68570,AT1G21790,AT2G42560,AT2G30830,AT1G52080,AT1G54570,AT3G26290,AT5G37550,AT1G09950,AT3G54820,AT1G66760,AT3G49160,AT5G14700,AT4G16760,AT5G12110,AT3G11480,AT1G62540,AT3G51750,AT5G43150,AT5G23730,AT1G08630,AT3G19270,AT3G21560,AT2G27420,AT5G52250,AT3G62590,AT1G72520,AT1G69870,AT1G72770,AT4G20830,AT1G78610,AT5G20230,AT4G21440,AT3G57540,AT5G64510,AT4G34000,AT1G07720,AT3G55640,AT4G15190,AT1G80110,AT5G48880,AT1G17180,AT5G13930,AT5G13750,AT1G52560,AT1G24070,AT1G19970,AT5G12010,AT4G19390,AT4G31860,AT2G37040,AT5G43260,AT4G23050,AT3G14690,AT4G30460,AT2G39050,AT5G19875,AT3G30460,AT3G09350,AT5G39520,AT5G66780,AT3G46670,AT2G30140,AT2G39350,AT5G64230,AT1G02850,AT5G10730,AT5G67480,AT1G02200,AT2G23340,AT5G47610,AT1G64950,AT4G05020,AT2G30490,AT4G12000,AT3G12510,AT4G27830,AT5G39610,AT5G58650,AT1G06000,AT1G17380,AT5G65280,AT2G16630,AT5G11260,AT3G54390,AT3G01970,AT2G41040,AT1G80820,AT3G16175,AT5G63450,AT4G17650,AT5G64310,AT5G43850,AT5G59480,AT2G25530,AT1G13990,AT5G15450,AT5G03210,AT3G52740,AT4G18010,AT1G30070,AT5G67300,AT4G09600,AT2G30360,AT5G59820,AT3G56260,AT1G51440,AT1G02390,AT1G60270,AT5G24150,AT4G27520,AT1G22400,AT2G16890,AT1G70700,AT4G26150,AT4G16690,AT1G09140,AT4G31800,AT3G24190,AT3G15990,AT1G62710,AT5G49480,AT1G58360,AT1G44350,AT1G76800,AT2G34660,AT2G29370,AT5G65140,AT5G51760,AT4G25700,AT4G16590,AT5G17780,AT1G78600,AT5G19850,AT2G02710,AT5G63790,AT4G33150,AT5G17760,AT5G50720,AT5G64170,AT3G50910,AT1G58340,AT4G10040,AT5G66760,AT4G00050,AT4G27030,AT5G11650,AT1G19640,AT5G57560,AT1G05560,AT5G57350,AT5G01670,AT4G34710,AT5G55400,AT3G03470,AT4G28290,AT5G04830,AT1G17050,AT1G64380,AT3G11420,AT2G34600,AT3G16330,AT2G22470,AT3G29200,AT5G08640,AT1G08650,AT4G36530,AT2G30550,AT5G40390,AT1G26770,AT4G22960,AT3G19580,AT2G27150,AT5G35970,AT3G44735,AT3G14200,AT4G23600,AT4G01660,AT1G02940,AT3G24170,AT1G54050,AT2G41000,AT1G67070,AT2G47460,AT5G62470,AT2G29670,AT5G35320,AT3G48690,AT5G66460,AT4G13180,AT2G29120,AT1G15430,AT1G13740,AT4G11570,AT1G56060,AT5G01540,AT5G51070,AT5G09230,AT5G60790,AT5G59130,AT3G01820,AT3G17790,AT5G65870,AT5G09590,AT1G07500,AT1G07180,AT1G15960,AT5G27520,AT4G27940,AT5G60540,AT4G34240,AT5G66650,AT4G32920,AT4G22820,AT1G19020,AT3G09440,AT5G13490,AT5G24850,AT2G34850,AT1G48320,AT5G65990,AT4G30210,AT4G17840,AT5G56090,AT1G05170,AT5G55120,AT1G50250,AT5G25450,AT5G09470,AT4G18170,AT5G20220,AT1G21410,AT1G53080,AT3G25780,AT3G09650,AT4G00430,AT2G35760,AT2G21640,AT3G48700,AT4G24120,AT5G22290,AT4G37430,AT4G25640,AT5G48180,AT1G69295,AT1G22370,AT3G22830,AT5G02270,AT1G33110,AT5G42050,AT1G22770,AT2G46800,AT5G20380,AT3G15350,AT1G24330,AT1G18870,AT2G37970,AT4G24130,AT1G15100,AT4G33040,AT3G54950,AT1G77680,AT1G27760,AT3G04620,AT3G14560,AT1G20160,AT5G13220,AT3G27570,AT4G33440,AT5G54840,AT5G01410,AT3G05650,AT5G24030,AT4G01070,AT5G61810,AT4G24380,AT3G01830,AT2G32800,AT3G23210,AT3G03900,AT3G51090,AT3G56090,AT2G21130,AT4G23990,AT5G19855,AT2G39020,AT2G37760,AT5G58380,AT4G30490,AT3G51450,AT5G09990,AT5G11110,AT1G01250,AT1G07510,AT3G47080,AT1G20030,AT5G06530,AT1G36160,AT3G12830,AT1G29230,AT3G07090,AT3G15790,AT5G67330,AT1G22190,AT5G52810,AT4G02380,AT4G34610,AT3G46450,AT4G17340,AT5G53870,AT5G49280,AT5G47240,AT3G50930,AT1G76130,AT3G17615,AT5G51720,AT3G17000,AT3G63010,AT5G52050,AT1G64970,AT3G59280,AT1G63840,AT1G63010,AT3G44880,AT1G54160,AT5G22500,AT3G59140,AT3G61220,AT3G02875,AT3G22550,AT2G18170,AT3G44100,AT1G19140,AT4G03320,AT5G17450,AT3G55110,AT4G03820,AT5G19440,AT5G49330,AT1G78570,AT2G41870,AT2G37240,AT5G42270,AT3G51860,AT3G44450,AT2G30040,AT4G09500,AT5G48540,AT4G14010,AT4G34860,AT5G54170,AT4G30290,AT5G37670,AT1G65560,AT1G28370,AT4G37470,AT3G54420,AT5G22300,AT4G35550,AT3G14720,AT2G46940,AT1G06690,AT3G59820,AT2G43500,AT5G02490,AT5G23850,AT5G17850,AT5G57900,AT4G37980,AT3G15760,AT4G35560,AT5G47550,AT3G57680,AT5G16970,AT1G53670,AT3G60690,AT2G43020,AT4G27652,AT2G17280,AT2G38470,AT2G23180,AT5G15860,AT2G47730,AT2G46420,AT2G35730,AT3G56620,AT1G57770,AT4G31390,AT3G23410,AT5G57610,AT5G03190,AT2G39330,AT1G17020,AT1G21980,AT3G53260,AT1G76960,AT1G30700,AT4G22590,AT1G32640,AT4G02420,AT1G73650,AT3G09910,AT5G01260,AT4G31750,AT3G26932,AT4G26540,AT3G03840,AT3G18980,AT1G22530,AT5G26200,AT5G40170,AT1G23080,AT3G09580,AT1G66980,AT3G07990,AT3G02380,AT1G09390,AT4G30020,AT4G33960,AT5G06270,AT5G11070,AT4G32570,AT4G00330,AT1G04040,AT4G39710,AT4G29700,AT1G11530,AT4G24350,AT1G29460,AT4G28780,AT5G11550,AT3G28130,AT2G46710,AT2G27050,AT3G23880,AT5G01015,AT2G30510,AT4G11360,AT3G07470,AT1G75500,AT4G38470,AT1G63260,AT2G20180,AT5G65310,AT2G17230,AT4G16985,AT4G28270,AT4G38770,AT1G79790,AT1G05805,AT3G50750,AT5G21170,AT3G19710,AT4G39770,AT4G22540,AT4G22570,AT3G01490,AT4G19380,AT5G24490,AT2G45470,AT5G05690,AT2G46330,AT3G19553,AT4G00410,AT2G33330,AT5G02890,AT5G57760,AT3G28040,AT5G19120,AT1G17700,AT4G08920,AT4G12030,AT5G15580,AT3G28860,AT5G13710,AT4G00780,AT1G48480,AT5G12050,AT1G11260,AT4G11190,AT2G38120,AT1G44446,AT1G12500,AT5G47500,AT2G32010,AT1G69530,AT1G23020,AT1G06080,AT5G46690,AT3G62630,AT4G20260,AT5G35790,AT1G31690,AT4G33000,AT5G57780,AT1G76890,AT5G64620,AT5G51850,AT1G60010,AT4G16990,AT1G80920,AT1G03870,AT1G10020,AT4G30690,AT2G25900,AT1G66150,AT1G76100,AT3G14840,AT1G25275,AT1G33240,AT4G38840,AT5G08520,AT1G72610,AT3G52060,AT4G39640,AT3G13690,AT5G14120,AT2G25200,AT1G21500,AT5G23010,AT3G52500,AT3G47800,AT2G15830,AT4G23300,AT1G35710,AT1G27210,AT1G29450,AT3G22970,AT3G06770,AT1G49230,AT1G53230,AT3G14240,AT1G80280,AT2G30520,AT3G01690,AT2G06925,AT3G45640,AT1G17990,AT4G38420,AT4G28240,AT5G54380,AT2G41250,AT4G01460,AT2G22990,AT3G43960,AT3G28910,AT2G30930,AT5G62280,AT4G13840,AT5G14090,AT5G19250,AT4G12980,AT5G54630,AT1G14280,AT5G65010,AT5G51550,AT1G69780,AT1G19770,AT5G48460,AT1G51940,AT4G23400,AT1G31920,AT1G36940,AT3G26740,AT1G49750,AT2G44210,AT1G07090,AT4G04955,AT4G18970,AT3G61210,AT5G25460,AT5G14920,AT5G06870,AT2G45170,AT1G35612,AT3G62110,AT2G16380,AT1G64640,AT3G28080,AT2G42320,AT1G67910,AT1G20190,AT5G06690,AT3G02170,AT5G02160,AT2G10940,AT2G41180,AT4G18290,AT3G23080,AT4G01330,AT3G23730,AT3G15570,AT4G00400,AT4G00950,AT1G72430,AT4G32340,AT5G01240,AT4G37800,AT1G63800,AT3G22240,AT4G19530,AT2G47440,AT1G23480,AT1G51400,AT3G28180,AT3G04290,AT3G46490,AT3G14310,AT4G12730,AT5G40450,AT4G27440,AT1G66970,AT1G22330,AT4G19690,AT3G45780,AT5G28020,AT3G50270,AT2G34510,AT5G52900,AT1G29500,AT2G28950,AT1G49500,AT5G50335,AT1G56430,AT1G06830,AT2G20670,AT1G01430,AT3G15630,AT3G56400,AT1G74940,AT2G15090,AT1G03130,AT1G59870,AT2G01420,AT5G19140,AT3G08940,AT1G56220,AT3G12710,AT4G16370,AT3G48720,AT2G02950,AT2G29290,AT4G17460,AT3G10520,AT3G21950,AT1G29440,AT1G48300,AT3G06070,AT1G09750,AT5G28770,AT3G18050,AT3G16850,AT1G47400,AT4G34220,AT4G31820,AT3G16520,AT1G78270,AT1G68190,AT5G25840,AT2G41090,AT3G58120,AT5G20250,AT1G22335,AT5G61440,AT2G15890,AT4G03210,AT4G38690,AT5G04230,AT3G50740,AT5G03120,AT1G11350,AT1G33811,AT1G21270,AT1G18620,AT5G07580,AT1G22690,AT1G20010,AT3G56360,AT1G23390,AT1G54820,AT2G06850,AT2G37640,AT3G56060,AT5G62360,AT3G62550,AT3G12610,AT4G14400,AT1G29660,AT4G36540,AT1G72150,AT2G41560,AT5G08330,AT3G15450,AT2G34620,AT1G78460,AT3G19850,AT2G22980,AT2G32100,AT5G11420,AT4G35770,AT5G22580,AT1G29510,AT3G48360,AT5G44020,AT3G27690,AT4G38860,AT1G13110,AT5G59080,AT3G07010,AT4G23820,AT5G65730,AT5G63180,AT2G45180,AT4G19170,AT5G05250,AT5G49360,AT1G66940,AT1G52190,AT5G03350,AT5G22920,AT5G44680,AT5G48490,AT2G30010,AT3G22231,AT2G33830,AT5G16030,AT1G25230,AT5G02760,AT1G80440,AT2G14560,AT1G19960,AT2G18300,AT1G68520,AT5G61590,AT2G40610,AT1G74670 KLEINE_GROWTH-LIGHT-3H-BLUE-LIGHT_UP Up-regulated at least 2-fold after a shift from growth light (100 ?mol photons m-2 s-1) to 3 h high fluence blue light (200 ?mol photons m-2 s-1) (Table S2 PubmedID:17478635) AT4G14690,AT3G22840,AT1G09350,AT1G61800,AT1G02820,AT2G42540,AT2G42530,AT1G51090,AT2G23170,AT5G52310,AT4G31870,AT1G78440,AT2G47780,AT5G07010,AT1G10370,AT1G16850,AT3G51240,AT2G23910,AT4G15480,AT5G06760,AT5G13170,AT2G33380,AT1G18400,AT1G15580,AT2G36750,AT5G62210,AT3G29575,AT1G56650,AT4G25480,AT1G64660,AT5G24120,AT3G56290,AT1G11210,AT3G15540,AT1G60190,AT1G06000,AT4G33905,AT1G48100,AT5G53970,AT1G06180,AT3G05640,AT3G05800,AT5G50800,AT1G01520,AT1G02340,AT3G50970,AT1G32900,AT5G42760,AT3G62090,AT2G29090,AT2G22810,AT5G02270,AT3G21890,AT1G65060,AT5G23730,AT5G17050,AT5G05270,AT4G32280,AT5G57760,AT5G44110,AT4G39210,AT1G02400,AT4G24960,AT3G17610,AT4G37760,AT5G59220,AT2G39980,AT2G22590,AT4G36110,AT3G21560,AT4G09820,AT3G57020,AT2G25530,AT5G49330,AT5G17780,AT3G55120,AT1G69260,AT1G06080,AT3G17130,AT4G18280,AT5G37550,AT2G16890,AT1G20450,AT4G16515,AT3G62610,AT5G35970,AT5G02540,AT4G15490,AT3G14690,AT5G08640,AT3G29200,AT1G12370,AT5G24850,AT3G44450,AT1G15050,AT1G79270,AT1G79520,AT5G50335,AT4G27657,AT5G52250,AT4G17550,AT1G73010,AT1G78510,AT2G37040,AT3G24190,AT5G01540,AT3G29590,AT3G48700,AT5G48880,AT3G52740,AT4G25640,AT2G28400,AT5G07000,AT1G52830,AT3G05660,AT1G78070,AT5G66590,AT1G23010,AT1G19200,AT1G01470,AT1G03905,AT1G48320,AT1G73390,AT1G21790,AT4G38400,AT5G07990,AT4G12000,AT1G17050,AT5G11260,AT1G04310,AT3G19450,AT2G25620,AT5G60540,AT5G44050,AT5G49480,AT2G24540,AT5G52300,AT1G68500,AT5G22300,AT5G02760,AT1G17830,AT4G14090,AT2G27420,AT3G17800,AT4G16146,AT1G04240,AT1G78100,AT1G76590,AT3G02990,AT4G26080,AT4G36010,AT1G62710,AT2G17280,AT1G16510,AT5G15950,AT5G50100,AT2G36630,AT1G06540,AT4G34740,AT4G27940,AT1G67360,AT2G41040,AT2G18790,AT5G12050,AT5G17220,AT5G01600,AT1G27760,AT4G17090,AT3G05630,AT1G69870,AT4G37150,AT2G22240,AT2G41190,AT1G73480,AT5G15160,AT5G58760,AT4G16780,AT1G76570,AT3G09650,AT5G56080,AT4G37770,AT5G59240,AT4G27030,AT5G43260,AT4G18390,AT1G06690,AT5G40590,AT5G57220,AT3G53260,AT5G58650,AT2G11810,AT1G65560,AT5G43860,AT4G19690,AT3G30460,AT4G30470,AT5G48540,AT2G17840,AT1G17710,AT3G07720,AT3G59670,AT1G17180,AT5G62280,AT2G37970,AT5G53980,AT3G59900,AT1G66540,AT5G22460,AT3G50340,AT4G14560,AT2G34650,AT4G26150,AT3G23210,AT4G39800,AT1G65870,AT5G54470,AT4G34990,AT5G09970,AT4G30650,AT5G52570,AT2G23180,AT1G27730,AT1G06430,AT5G04340,AT4G25500,AT4G21200,AT4G04840,AT2G37770,AT2G40010,AT3G44735,AT5G62220,AT2G36220,AT2G46270,AT5G09470,AT4G32770,AT1G26770,AT4G25700,AT5G62670,AT5G13930,AT4G28720,AT5G52900,AT3G55510,AT3G56090,AT3G01820,AT1G73120,AT5G01410,AT5G19850,AT5G41400,AT1G29395,AT3G14440,AT5G12010,AT4G01660,AT4G30290,AT4G00050,AT4G27520,AT2G47890,AT2G32220,AT3G55760,AT1G57590,AT4G19390,AT5G59480,AT1G61930,AT1G07430,AT4G27260,AT2G16430,AT5G54060,AT3G44720,AT2G39710,AT2G36470,AT5G42800,AT3G61890,AT3G27270,AT3G09540,AT5G01790,AT2G36870,AT3G02140,AT5G43150,AT2G16350,AT3G23030,AT5G64770,AT5G20220,AT4G01080,AT5G60790,AT4G25630,AT2G27820,AT3G07050,AT3G54420,AT4G14550,AT4G12130,AT1G79140,AT4G39670,AT5G16980,AT1G80130,AT4G36530,AT3G21390,AT2G31750,AT1G49660,AT5G26220,AT2G27840,AT5G57050,AT5G50200,AT5G17760,AT1G01060,AT1G17100,AT1G30040,AT5G61820,AT1G79510,AT1G01420,AT3G60650,AT5G26340,AT1G76580,AT3G22370,AT3G57830,AT5G25190,AT4G26850,AT1G55500,AT2G26710,AT5G17010,AT2G02990,AT3G54200,AT4G34610,AT5G63120,AT4G37470,AT3G07700,AT2G14460,AT5G64780,AT2G18010,AT1G60270,AT1G77450,AT1G46768,AT4G34950,AT3G23810,AT1G02940,AT4G01870,AT4G24570,AT5G47370,AT4G04940,AT5G25350,AT3G54950,AT5G48900,AT4G27820,AT2G45130,AT1G62570,AT2G21590,AT1G61340,AT5G47060,AT5G66650,AT3G08640,AT1G27200,AT5G17030,AT2G33530,AT3G59140,AT2G28900,AT5G59050,AT1G48650,AT3G12830,AT5G54510,AT3G19970,AT4G23490,AT3G25410,AT1G56060,AT3G13940,AT2G02120,AT2G41230,AT3G22660,AT4G31390,AT5G20230,AT1G47530,AT4G13800,AT3G08730,AT1G56170,AT5G57560,AT2G17270,AT1G17170,AT1G18900,AT1G06570,AT2G39450,AT1G05070,AT3G16175,AT4G38100,AT3G21670,AT2G30490,AT1G52930,AT4G20830,AT1G27910,AT1G52890,AT4G22590,AT5G56950,AT5G02280,AT3G63010,AT1G03530,AT5G10730,AT3G16810,AT1G66390,AT3G57490,AT5G09230,AT1G51680,AT5G47880,AT5G51220,AT2G29760,AT1G78570,AT4G28290,AT4G30830,AT3G27570,AT2G41000,AT1G30240,AT5G49560,AT4G05410,AT5G04830,AT3G61220,AT3G52340,AT4G00370,AT3G14770,AT1G64950,AT3G07390,AT2G34930,AT4G27410,AT3G46670,AT1G21980,AT4G04460,AT1G13570,AT5G48850,AT4G18570,AT5G51970,AT1G25450,AT1G53570,AT5G51850,AT1G23020,AT1G04400,AT1G75100,AT5G01240,AT1G30520,AT5G44060,AT1G73680,AT5G66880,AT2G32150,AT1G09390,AT5G57630,AT1G21270,AT5G66490,AT4G37800,AT2G46490,AT2G17710,AT1G72200,AT3G08840,AT2G30210,AT5G25770,AT3G07310,AT3G29810,AT4G30790,AT2G15090,AT5G61290,AT1G72160,AT4G29520,AT5G37740,AT4G30690,AT4G03070,AT3G12150,AT5G63190,AT3G59660,AT1G48430,AT1G73260,AT5G06870,AT4G29700,AT3G45290,AT4G25620,AT1G78680,AT5G24490,AT3G28040,AT5G03120,AT2G48140,AT2G17500,AT5G58570,AT3G06080,AT2G42890,AT3G49580,AT5G35370,AT4G22490,AT2G39920,AT2G39000,AT3G15630,AT1G59580,AT1G78260,AT2G28950,AT2G21140,AT2G18280,AT4G17340,AT1G28580,AT4G11650,AT5G40020,AT1G13990,AT4G33000,AT2G42320,AT1G67750,AT2G39310,AT1G53885,AT1G26150,AT3G60130,AT3G03190,AT1G01140,AT3G48490,AT1G55960,AT5G40850,AT2G38170,AT3G08940,AT3G19553,AT3G16450,AT4G39090,AT4G14680,AT1G44770,AT1G08430,AT3G23690,AT5G18640,AT5G63180,AT1G12780,AT1G47960,AT4G19160,AT4G39770,AT1G78270,AT2G40110,AT3G14620,AT4G05200,AT3G01770,AT2G37480,AT5G05600,AT1G21100,AT1G01430,AT3G56050,AT1G72820,AT1G55310,AT5G52120,AT3G16857,AT3G60300,AT2G42300,AT5G33370,AT2G37750,AT1G02300,AT4G17870,AT2G39570,AT1G12010,AT1G70820,AT4G36040,AT1G14360,AT1G24100,AT2G25510,AT5G16030,AT2G03890,AT3G26890,AT3G03270,AT2G30010,AT1G26580,AT3G28090,AT5G20250,AT1G11260,AT1G52000,AT5G56850,AT3G26510,AT4G36380,AT5G39890,AT1G47400,AT1G70520,AT1G58032,AT3G04605,AT4G20260,AT4G35780,AT2G38820,AT5G52640,AT3G28050,AT2G26980,AT1G12240,AT4G23890,AT3G49780,AT4G20820,AT5G40450,AT2G35260,AT4G05070,AT4G14060,AT1G51805,AT2G19310,AT3G11930,AT1G23730,AT5G53160,AT5G04950,AT1G52340,AT1G65860,AT1G69080,AT1G11700,AT3G17470,AT4G39940,AT5G51440,AT4G19530,AT3G18050,AT1G09415,AT2G25900,AT2G22660,AT1G31550,AT1G07230,AT2G29290,AT2G22990,AT1G14700,AT3G56060,AT3G47160,AT1G10150,AT2G20670,AT1G07350,AT1G68530,AT5G63800,AT4G01460,AT1G01490,AT3G50270,AT1G33811,AT5G03380,AT4G36860,AT1G77210,AT1G56280,AT5G40890,AT3G52070,AT5G54940,AT2G44210,AT4G32940,AT1G73330,AT3G12580,AT2G42760,AT1G22360,AT1G22500,AT3G07340,AT2G46030,AT5G15120,AT4G00780,AT5G28020,AT2G43820,AT1G30260,AT1G05560,AT3G28130,AT5G60100,AT5G46690,AT4G08920,AT3G15770,AT1G35612,AT4G32340,AT3G02170,AT2G46710,AT3G10980,AT2G18660,AT2G02810,AT3G06390,AT1G79670,AT4G15620,AT1G26670,AT1G69530,AT1G05300,AT4G36540,AT3G58620,AT5G17700,AT4G16520,AT3G62010,AT5G04040,AT5G58787,AT2G20560,AT2G33850,AT1G17990,AT5G26200,AT1G14120,AT1G13650,AT3G55960,AT5G23860,AT1G54050,AT5G65480,AT4G11360,AT1G76100,AT1G28330,AT2G24550,AT5G44020,AT5G53450,AT1G56010,AT2G34490,AT4G31820,AT2G22330,AT1G51400,AT5G05690,AT1G67910,AT5G37990,AT1G23870,AT2G03310,AT1G76890,AT1G26440,AT5G59780,AT4G23400,AT5G61440,AT1G58180,AT2G04690,AT5G35790,AT5G46780,AT1G22335,AT1G72180,AT4G32980,AT1G22890,AT2G24150,AT5G19140,AT4G04955,AT3G05170,AT2G21185,AT3G26450,AT3G10040,AT1G48300,AT3G28080,AT1G52190,AT5G18630,AT3G52060,AT2G01530,AT1G11350,AT2G40435,AT4G19860,AT5G08330,AT5G08520,AT2G30510,AT3G50440,AT4G19420,AT5G14120,AT2G03750,AT2G02950,AT5G10040,AT2G36950,AT3G06070,AT2G44740,AT3G10740,AT5G45650,AT1G19530,AT4G24350,AT3G27220,AT3G26280,AT2G25200,AT5G56870,AT4G01026,AT4G03060,AT4G35750,AT2G46220,AT3G61210,AT1G61590,AT1G31820,AT1G64200,AT3G23880,AT5G28770,AT3G62550,AT3G19850,AT4G17460,AT5G64410,AT5G48490,AT1G72150,AT1G18620,AT5G07690,AT3G12320,AT2G01520,AT1G01240,AT2G41250,AT1G19770,AT1G19960,AT3G10020,AT1G33055,AT3G16520,AT1G27290,AT1G19000,AT3G13062,AT3G22970,AT2G21210,AT2G16060,AT1G64720,AT3G24500,AT5G19120,AT1G74940,AT2G44130,AT1G68190,AT1G80180,AT5G59310,AT5G65730,AT2G20180,AT3G47560,AT1G15740,AT2G14560,AT3G26740,AT5G44680,AT3G59010,AT1G37130,AT4G35770,AT3G16770,AT3G53800,AT4G38840,AT4G28270,AT4G14400,AT5G07580,AT2G18300,AT4G33960,AT3G15720,AT3G63210,AT4G21870,AT2G38310,AT4G33070,AT2G15050,AT1G19670,AT1G72430,AT2G30520,AT3G15450,AT5G21170,AT2G45170,AT4G33150,AT3G03470,AT2G32100,AT3G08860,AT4G14270,AT4G13830,AT5G25280,AT3G07350,AT2G25590,AT2G15890,AT2G17850,AT3G22740,AT1G54820,AT4G01330,AT3G59060,AT2G40610,AT3G59940,AT4G33666,AT1G13110,AT1G77760,AT2G43010,AT4G38690,AT2G33830,AT1G63800,AT1G60960,AT3G56360,AT3G43190,AT1G23390,AT1G56220,AT2G22980,AT5G59080,AT5G27350,AT1G70290,AT5G05250,AT2G15960,AT1G25230,AT4G10270,AT2G34620,AT1G80920,AT1G43800,AT1G13080,AT5G22920,AT3G23080,AT5G49360,AT1G80440,AT5G62360,AT1G74670,AT1G49500,AT4G39675,AT1G68520,AT4G19170,AT4G27450,AT3G48360,AT5G61590 KLEINE_CRY1-MUTANT/WT_GROWTH-LIGHT_UP Up-regulated at least 2-fold different in the cry1 mutant compared to wild type in growth light conditions (100 ?mol photons m-2 s-1) (Table S3 PubmedID:17478635) AT4G28520,AT5G44120,AT5G40420,AT3G17520,AT1G04560,AT5G44440,AT1G73190,AT3G21720,AT1G06080,AT1G43590,AT5G60450,AT1G15380,AT2G41480,AT5G03860,AT5G18040,AT3G15670,AT3G54940,AT5G62280,AT5G12050,AT2G33860,AT2G32100,AT3G22231,AT1G17380,AT2G41090,AT4G01080,AT5G62200,AT4G22490,AT2G18660,AT3G57260,AT5G48850,AT2G16060,AT5G10760,AT1G21250,AT3G08860,AT4G14400,AT2G05630,AT1G77120,AT4G33070,AT3G43190,AT1G75040,AT2G05620,AT5G23570,AT2G39030,AT2G14560,AT1G75240,AT4G08920,AT1G75270,AT1G75280 KLEINE_HY5-MUTANT/WT_GROWTH-LIGHT_UP Up-regulated at least 2-fold different in the hy5 mutant compared to wild type in growth light conditions (100 ?mol photons m-2 s-1) (Table S4 PubmedID:17478635) AT1G50290,AT5G24240,AT5G15360,AT4G28520,AT5G44440,AT5G35940,AT5G04120,AT3G29410,AT2G16005,AT1G10110,AT5G39100,AT5G19890,AT5G28030,AT1G18980,AT3G44070,AT1G02300,AT2G18210,AT2G43050,AT5G47450,AT1G44318,AT2G33790,AT5G62280,AT5G19100,AT5G40420,AT3G17520,AT2G04460,AT1G66100,AT2G28490,AT3G21370,AT1G04560,AT5G02760,AT1G18970,AT1G73190,AT1G62510,AT1G15380,AT1G09420,AT4G11210,AT2G43590,AT4G13420,AT5G45070,AT1G29450,AT5G13200,AT5G12050,AT1G14240,AT3G22570,AT3G42800,AT1G48750,AT1G29440,AT1G29460,AT2G40610,AT1G03870,AT5G23570,AT2G22810,AT2G22860,AT5G23020,AT5G27200,AT1G52820,AT2G39530,AT2G41480,AT4G21850,AT5G60660,AT5G45820,AT3G21720,AT5G53250,AT5G25190,AT4G25140,AT1G12080,AT1G29500,AT3G48970,AT4G37220,AT2G26560,AT5G50335,AT1G10380,AT1G14070,AT3G01570,AT1G17710,AT1G10370,AT5G39860,AT3G03840,AT1G76240,AT1G29510,AT1G52830,AT5G15180,AT5G62340,AT5G37130,AT3G15670,AT5G53980,AT5G52070,AT5G03120,AT1G50560,AT3G49840,AT5G36140,AT5G06980,AT1G73120,AT2G17710,AT1G65310,AT5G67430,AT4G38850,AT1G06080,AT5G24160,AT1G22990,AT4G30270,AT1G18810,AT1G21910,AT2G42250,AT1G34510,AT5G59090,AT1G11545,AT4G38860,AT3G28740,AT4G30280,AT5G09570,AT5G55620,AT3G01260,AT1G78340,AT2G14210,AT4G19030,AT3G46900,AT2G25810,AT1G15270,AT4G34760,AT5G27660,AT1G53830,AT1G12330,AT5G15950,AT3G09940,AT1G01120,AT5G07000,AT3G15540,AT2G43610,AT3G58120,AT5G03570,AT1G80240,AT1G53680,AT2G37750,AT4G30290,AT1G72140,AT3G53710,AT4G00050,AT3G55630,AT5G53450,AT1G21730,AT1G49650,AT1G12220,AT4G38750,AT5G43150,AT1G05200,AT1G19485,AT2G33850,AT5G27670,AT5G25810,AT4G36430,AT2G25450,AT5G37550,AT5G42900,AT5G20450,AT1G48690,AT1G07050,AT2G16350,AT3G55170,AT5G22460,AT3G46270,AT2G16660,AT5G28020,AT5G04220,AT5G08000,AT1G21250,AT1G35560,AT5G43760,AT4G22490,AT5G05760,AT1G35250,AT5G05890,AT3G44720,AT3G21560,AT1G15790,AT5G24620,AT5G28290,AT3G47070,AT1G08920,AT3G52740,AT1G05340,AT1G27520,AT1G14685,AT1G19640,AT2G20850,AT1G31690,AT5G20580,AT3G29375,AT1G15880,AT2G47460,AT2G17040,AT5G41650,AT3G57260,AT5G16980,AT1G20390,AT3G45290,AT5G17050,AT5G42720,AT5G26200,AT1G10730,AT5G57785,AT5G23220,AT2G47890,AT1G51360,AT5G10760,AT3G02885,AT1G19960,AT1G56650,AT3G22240,AT5G13930,AT5G23760,AT5G08370,AT3G57020,AT1G51430,AT2G23330,AT1G12750,AT3G46980,AT2G24850,AT2G21860,AT1G47250,AT3G44630,AT5G37290,AT5G11260,AT5G43450,AT1G35710,AT1G65450,AT3G17610,AT5G14650,AT5G27990,AT5G07690,AT1G03420,AT3G47800,AT5G22860,AT5G36930,AT3G50440,AT1G17650,AT1G10910,AT2G39030,AT5G38030,AT1G57770,AT5G05270,AT2G25510,AT1G76960,AT5G23010,AT5G07990,AT3G46530,AT3G30720,AT5G44110,AT5G17220,AT5G62210,AT5G54060,AT5G22510,AT1G47270,AT2G23910,AT3G29590,AT4G14090,AT5G42800,AT3G22840,AT5G16250,AT2G24190,AT1G16260,AT5G37990,AT5G02270,AT5G03350,AT3G43740,AT5G36220,AT5G43440,AT4G14400,AT5G17890,AT3G44430,AT5G38020,AT5G08640,AT3G51240,AT1G35612,AT5G43270,AT1G15180,AT1G12010,AT3G44970,AT5G24150,AT1G09910,AT2G14560,AT5G03200,AT1G12400,AT5G17880,AT5G26270,AT5G40950,AT5G05750,AT3G22231,AT5G23830 KLEINE_CRY1-MUTANT/WT_HIGH-LIGHT_NONEXPRESSION-GROWTHLIGHT_UP Up-regulated at least 2-fold different in the cry1 mutant compared to wild type in high light conditions (1000 ?mol photons m-2 s-1) AND not differently expressed in growth light conditions (100 ?mol photons m-2 s-1) (Table S5 PubmedID:17478635) AT4G14690,AT3G22840,AT4G31870,AT1G66390,AT2G23910,AT3G24750,AT5G52250,AT5G60540,AT1G66540,AT5G62210,AT5G08640,AT5G17780,AT3G44450,AT1G23010,AT2G25530,AT5G24850,AT1G65060,AT3G51240,AT1G71000,AT4G15480,AT2G41040,AT2G47460,AT5G56090,AT5G02270,AT5G54300,AT2G21640,AT4G31800,AT1G09950,AT5G11260,AT2G36590,AT3G17610,AT2G41000,AT2G30830,AT1G06000,AT5G49330,AT2G37040,AT1G76570,AT1G10370,AT4G37150,AT3G55120,AT5G48880,AT1G78510,AT1G56650,AT3G02170,AT3G19710,AT4G34220,AT2G34620,AT1G20160,AT3G02380,AT4G28240,AT4G18970,AT1G25230,AT5G16030,AT5G44680,AT4G31820,AT4G38860,AT3G27690,AT5G53870,AT1G14280,AT2G37640,AT2G15090,AT5G22580,AT5G50335,AT1G29440,AT1G49500,AT1G56600,AT4G38690,AT1G29500,AT2G18300,AT5G02760,AT1G80440,AT5G48490,AT1G29510,AT1G52190,AT2G40610,AT1G74670,AT4G19170 KLEINE_HY5-MUTANT/WT_HIGH-LIGHT_NONEXPRESSION-GROWTHLIGHT_UP Up-regulated at least 2-fold differentin the hy5 mutant compared to wild type in high light conditions (1000 ?mol photons m-2 s-1) AND not differently expressed in growth light conditions (100 ?mol photons m-2 s-1) (Table S6 PubmedID:17478635) AT4G31870,AT1G66390,AT4G37990,AT4G14690,AT1G65060,AT1G66540,AT1G23010,AT5G52250,AT4G09820,AT1G02940,AT5G48880,AT1G16850,AT3G24750,AT1G51440,AT5G24850,AT5G60540,AT2G41000,AT5G17780,AT2G39330,AT2G37040,AT1G06690,AT3G53260,AT2G42530,AT1G15960,AT1G10585,AT1G43160,AT5G35970,AT4G36530,AT4G26150,AT3G29200,AT2G25530,AT5G37300,AT4G01660,AT2G41040,AT3G55120,AT1G06000,AT1G54570,AT1G17420,AT2G34810,AT5G56090,AT3G09650,AT3G44450,AT4G37150,AT5G51760,AT4G15480,AT1G76570,AT1G09500,AT3G43270,AT3G13130,AT1G53670,AT2G29460,AT4G28780,AT1G06180,AT1G48100,AT3G19580,AT3G28910,AT5G14920,AT2G28400,AT2G18300,AT1G54050,AT3G51860,AT3G56400,AT1G20190,AT3G19710,AT1G80440 BAENA-GONZALEZ_KIN10_UP Increased-regulation by KIN10 (1021 genes). (Table S3 PubmedID:17671505) AT5G54080,AT3G16150,AT4G33150,AT1G64660,AT1G03090,AT4G34030,AT3G45300,AT3G06850,AT3G13450,AT1G55510,AT1G21400,AT2G14170,AT3G30775,AT5G18170,AT3G47340,AT1G10070,AT2G31810,AT2G38400,AT3G06420,AT2G45170,AT4G16520,AT1G15380,AT1G53580,AT1G80160,AT3G21870,AT3G26100,AT1G10340,AT2G18280,AT5G49360,AT5G56870,AT4G30270,AT3G45970,AT5G57560,AT1G32170,AT4G19420,AT2G45220,AT1G67070,AT1G63180,AT1G12780,AT5G59750,AT5G04040,AT2G26560,AT5G19120,AT1G28330,AT5G66170,AT4G28040,AT3G14770,AT1G56220,AT4G37010,AT2G28720,AT2G37470,AT5G58720,AT5G59430,AT3G27360,AT2G28740,AT2G18050,AT1G09200,AT3G45930,AT5G10390,AT3G46030,AT3G20670,AT3G18035,AT5G59690,AT3G45980,AT1G06760,AT2G45850,AT5G63190,AT4G37870,AT4G15530,AT1G43670,AT1G07110,AT3G49160,AT4G37760,AT1G03400,AT3G19290,AT2G46690,AT2G33830,AT4G27450,AT4G27260,AT5G53590,AT3G15450,AT3G62550,AT2G38210,AT3G15500,AT2G03750,AT5G58800,AT4G19860,AT3G15850,AT5G23050,AT3G16910,AT5G16340,AT4G27780,AT2G41540,AT2G35690,AT3G51840,AT3G60510,AT1G18460,AT1G02660,AT5G18630,AT5G41080,AT3G02040,AT5G56100,AT5G49730,AT4G38580,AT2G19800,AT5G58730,AT5G20250,AT5G51970,AT2G01890,AT4G01130,AT1G58180,AT3G26280,AT4G37330,AT3G26220,AT1G13080,AT3G26230,AT3G26170,AT1G09390,AT1G61820,AT3G60140,AT3G13750,AT3G57520,AT3G61060,AT5G10300,AT4G37150,AT5G39580,AT1G62510,AT3G46690,AT3G09020,AT3G21780,AT2G28110,AT2G43400,AT5G28050,AT1G55810,AT5G35790,AT1G09420,AT2G13360,AT3G62410,AT1G12900,AT1G80380,AT3G16250,AT1G76100,AT1G03130,AT1G14150,AT3G50820,AT1G51400,AT5G64240,AT1G75460,AT3G22260,AT2G21430,AT2G22990,AT5G47040,AT3G14067,AT1G63800,AT5G52120,AT2G44130,AT1G61340,AT1G77000,AT4G10925,AT3G06380,AT1G80440,AT1G23390,AT3G59940,AT5G45680,AT1G73655,AT1G61750,AT1G16150,AT4G10730,AT3G57770,AT1G63580,AT1G78290,AT2G30500,AT3G49060,AT4G38470,AT3G46930,AT3G61160,AT3G45780,AT5G38990,AT3G10550,AT2G20040,AT1G35670,AT5G21170,AT1G04440,AT4G11330,AT3G01090,AT2G35680,AT4G18950,AT5G24490,AT1G62750,AT4G20110,AT1G64500,AT1G03850,AT1G60740,AT5G06690,AT1G08570,AT1G11530,AT1G45145,AT4G16680,AT4G03110,AT5G13730,AT5G24120,AT1G79700,AT1G22985,AT3G57040,AT3G02550,AT3G07340,AT4G01120,AT2G40620,AT5G28770,AT5G49450,AT4G39070,AT5G57660,AT3G47500,AT1G69570,AT4G05330,AT5G39550,AT3G19580,AT4G23450,AT4G28270,AT5G55970,AT2G19810,AT1G50440,AT4G14540,AT5G63470,AT5G22220,AT1G68670,AT4G10920,AT5G59340,AT3G61890,AT2G03710,AT2G23290,AT5G17300,AT5G47390,AT1G74840,AT1G71030,AT3G04060,AT1G64280,AT5G23420,AT5G23405,AT1G44770,AT5G24520,AT3G61260,AT4G37610,AT3G48360,AT5G22920,AT2G20030,AT3G56930,AT3G15070,AT4G11370,AT4G02075,AT5G24870,AT1G02860,AT1G22500,AT4G03510,AT4G11360,AT4G35770,AT3G56400,AT5G49690,AT2G39980,AT5G24530,AT1G06570,AT1G30720,AT2G29340,AT3G57020,AT1G34760,AT3G17470,AT3G51920,AT2G33380,AT4G35750,AT1G35140,AT5G09440,AT5G52250,AT4G08920,AT3G26740,AT2G35170,AT4G17080,AT5G18670,AT2G21970,AT3G15620,AT1G32090,AT1G30360,AT2G17880,AT1G72070,AT5G16650,AT4G13830,AT1G80920,AT1G23120,AT1G54410,AT3G45290,AT1G72890,AT5G63020,AT1G67980,AT1G73260,AT1G19610,AT1G70820,AT1G12240,AT1G35580,AT4G10120,AT1G44446,AT1G72150,AT5G04770,AT2G40420,AT1G01620,AT3G16240,AT3G26520,AT2G35800,AT2G47600,AT1G57990,AT1G22570,AT2G24240,AT4G05110,AT1G77210,AT5G13740,AT1G08920,AT1G11260,AT1G23870,AT1G70290,AT1G60140,AT2G18700,AT5G14470,AT2G33130,AT4G25580,AT1G78460,AT2G44380,AT3G51540,AT2G44370,AT2G40110,AT2G04690,AT3G13710,AT2G41250,AT5G06570,AT2G44990,AT1G66130,AT1G12250,AT1G58340,AT3G47430,AT2G03730,AT2G39570,AT5G57655,AT2G47770,AT4G28030,AT5G63970,AT5G02230,AT5G53490,AT3G10740,AT5G24890,AT1G18270,AT2G42890,AT3G29240,AT2G44790,AT3G47160,AT3G13062,AT4G14500,AT5G64570,AT1G15740,AT5G05440,AT5G63620,AT2G24550,AT2G39400,AT1G58200,AT4G20260,AT2G32150,AT5G25280,AT3G14050,AT5G32450,AT1G22930,AT3G26510,AT1G64720,AT3G49620,AT2G30600,AT4G25940,AT3G06780,AT3G25690,AT3G26630,AT3G23700,AT2G47200,AT1G24600,AT1G15030,AT3G59930,AT4G26290,AT3G01430,AT1G15045,AT5G15120,AT5G45310,AT1G20180,AT4G27030,AT5G02010,AT3G25870,AT1G75190,AT1G69050,AT2G42900,AT4G28085,AT5G51390,AT5G59080,AT2G25460,AT1G33055,AT5G39210,AT4G33660,AT4G33980,AT4G19370,AT3G17160,AT5G16180,AT2G30610,AT1G80190,AT5G41810,AT1G66890,AT3G11620,AT4G30670,AT5G02710,AT5G40740,AT3G10020,AT2G20670,AT5G02020,AT1G28260,AT2G38820,AT3G02140,AT3G03880,AT3G07310,AT2G44010,AT3G55840,AT4G28080,AT1G67920,AT1G72060,AT5G39520,AT3G07350,AT5G49900,AT3G03870,AT1G54740,AT5G14190,AT3G20340,AT2G18680,AT3G52070,AT2G25200,AT1G12790,AT2G34600,AT1G60870,AT2G18440,AT1G01240,AT4G30993,AT4G00355,AT5G42900,AT1G66180,AT3G06080,AT1G03610,AT1G80940,AT4G35760,AT3G26890,AT4G16985,AT1G10150,AT4G38060,AT3G13950,AT1G22890,AT3G49590,AT5G19070,AT1G03290,AT2G46550,AT1G03380,AT1G10140,AT1G01770,AT3G49790,AT2G15695,AT1G42550,AT3G15630,AT3G19800,AT1G73650,AT4G32870,AT1G05340,AT3G56140,AT4G25170,AT5G26734,AT4G28290,AT1G53400,AT4G19160,AT4G01026,AT1G23710,AT2G31945,AT3G15900,AT5G23340,AT5G66650,AT1G69890,AT5G40690,AT5G10695,AT5G02160,AT5G59960,AT5G54730,AT5G24165,AT4G33666,AT2G36220,AT1G02816,AT1G29760,AT3G03150,AT5G15190,AT3G52060,AT2G15890,AT2G44360,AT1G80180,AT1G68440,AT4G15545,AT1G07040,AT5G47050,AT1G25400,AT1G27100,AT2G40000,AT1G15010,AT2G46220,AT1G25275 BAENA-GONZALEZ_KIN10_DN Decreased-regulation by KIN10 (1021 genes). (Table S3 PubmedID:17671505) AT3G02760,AT2G41220,AT5G38530,AT1G31860,AT4G35630,AT4G34200,AT3G43250,AT5G48580,AT3G56070,AT5G58710,AT1G77550,AT5G65860,AT1G04820,AT4G14960,AT2G22470,AT3G13520,AT1G69530,AT1G26770,AT3G25140,AT5G45280,AT4G02330,AT3G49220,AT3G43270,AT3G23820,AT3G29360,AT1G68795,AT5G39500,AT1G80530,AT2G34350,AT2G16660,AT3G10530,AT5G20700,AT5G14520,AT2G40360,AT5G64420,AT3G09720,AT4G26600,AT5G56950,AT4G16630,AT5G35910,AT1G59990,AT3G18600,AT3G57150,AT5G55915,AT1G03360,AT5G67240,AT3G61620,AT3G15080,AT1G53310,AT1G20950,AT2G20610,AT3G50660,AT1G19640,AT3G11480,AT4G13790,AT5G13320,AT3G23240,AT1G20560,AT4G31810,AT1G27950,AT2G38540,AT5G04950,AT2G37770,AT1G69295,AT4G33580,AT4G39950,AT3G26830,AT4G31500,AT5G55050,AT4G36360,AT1G02850,AT1G17180,AT2G29480,AT2G29440,AT3G09270,AT2G30860,AT1G76400,AT5G66680,AT2G19670,AT4G31790,AT3G12270,AT5G16960,AT3G28200,AT5G05340,AT2G02850,AT3G18280,AT4G12500,AT4G13180,AT1G19300,AT3G24040,AT1G71070,AT3G15350,AT3G57630,AT2G36970,AT3G50760,AT5G33290,AT4G05020,AT3G01820,AT5G63400,AT5G03300,AT3G09820,AT3G55010,AT2G35040,AT1G29900,AT3G20330,AT1G64190,AT4G13890,AT3G52500,AT4G38100,AT3G45010,AT5G17760,AT5G16930,AT5G57480,AT3G50930,AT5G36950,AT2G04160,AT5G67360,AT3G03060,AT5G09800,AT4G26780,AT5G16070,AT4G25340,AT3G13470,AT2G28000,AT5G10290,AT1G11330,AT5G06750,AT3G08680,AT2G25620,AT5G61570,AT2G17820,AT4G04540,AT3G13690,AT3G23000,AT2G19190,AT2G37710,AT1G06390,AT1G51890,AT3G25250,AT3G18130,AT5G60980,AT2G31660,AT4G30930,AT1G64880,AT3G49080,AT3G12390,AT4G10480,AT1G33040,AT1G73180,AT5G64670,AT2G42710,AT4G22380,AT5G08180,AT5G20160,AT4G29410,AT1G15810,AT1G07070,AT1G15250,AT2G18400,AT1G80615,AT2G32220,AT3G04770,AT4G30800,AT3G57490,AT3G22300,AT2G37600,AT3G58660,AT3G10610,AT4G25890,AT1G80750,AT1G61580,AT3G06680,AT2G21580,AT2G45710,AT2G25210,AT4G12600,AT3G58700,AT5G39850,AT2G20450,AT5G48760,AT3G16780,AT3G55280,AT3G04920,AT5G22440,AT3G44590,AT5G60670,AT1G34030,AT3G22230,AT4G10450,AT3G06700,AT5G64140,AT4G25740,AT1G25260,AT5G23740,AT5G07090,AT3G28900,AT5G58420,AT2G32060,AT4G15770,AT3G09500,AT1G27400,AT3G59540,AT3G47370,AT5G39740,AT4G15000,AT5G67510,AT5G56710,AT2G36620,AT3G05560,AT2G33370,AT4G26230,AT4G00100,AT5G47700,AT3G02560,AT2G44120,AT5G10360,AT1G26880,AT5G61170,AT4G17390,AT3G23390,AT3G16080,AT1G22780,AT5G16130,AT5G59850,AT3G56340,AT5G52650,AT3G60770,AT1G15930,AT3G25520,AT4G18730,AT2G37190,AT2G47610,AT3G07110,AT4G31700,AT2G27710,AT3G49010,AT4G16720,AT1G57660,AT2G41840,AT3G49910,AT1G72370,AT3G60245,AT1G23290,AT1G60660,AT1G63940,AT2G32920,AT1G04980,AT3G54960,AT1G69880,AT1G77510,AT2G47470,AT1G21750,AT4G34910,AT4G28450,AT1G49760,AT1G10580,AT4G25630,AT3G23830,AT1G48570,AT5G61030,AT2G20490,AT2G21660,AT3G03920,AT2G24120,AT3G25940,AT5G45140,AT1G60850,AT3G57660,AT5G53290,AT5G61890,AT4G37540,AT5G65640,AT4G34590,AT3G16870,AT1G04990,AT5G18550,AT5G58620,AT1G72440,AT5G29000,AT5G60690,AT1G27050,AT2G27840,AT3G44750,AT5G22650,AT3G28910,AT5G45420,AT1G56650,AT5G46590,AT2G19520,AT1G80270,AT4G25730,AT1G60770,AT3G05060,AT5G27140,AT1G56110,AT3G51800,AT5G50570,AT5G41400,AT5G60250,AT2G28450,AT1G23280,AT5G23290,AT5G15810,AT1G49600,AT3G61820,AT3G54400,AT4G22070,AT3G21500,AT1G61120,AT5G44390,AT2G29350,AT3G21230,AT1G76790,AT5G11100,AT5G56360,AT3G59820,AT5G07340,AT2G15760,AT1G56340,AT1G09210,AT5G61790,AT1G30960,AT3G07050,AT2G43130,AT1G48630,AT1G05200,AT1G09530,AT2G03480,AT3G23300,AT5G03160,AT3G07770,AT3G23990,AT4G16660,AT2G33210,AT5G49910,AT3G62600,AT4G24190,AT4G23690,AT1G72920,AT4G09420,AT1G55210,AT2G17480,AT1G33560,AT5G53760,AT3G11010,AT1G64060,AT5G51060,AT3G52340,AT3G15020,AT4G21910,AT3G23550,AT3G51670,AT1G29310,AT3G59140,AT1G71330,AT2G36910,AT3G53480,AT1G58360,AT2G46450,AT3G20240,AT5G01340,AT5G24030,AT3G51860,AT2G38170,AT1G69850,AT1G48370,AT4G21680,AT3G47960,AT2G38940,AT3G25120,AT2G29530,AT5G50810,AT1G61570,AT5G61520,AT3G18830,AT1G71880,AT2G15320,AT4G17430,AT3G24982,AT5G19750,AT2G25100,AT4G02400,AT3G48610,AT1G72280,AT2G39795,AT5G16750,AT1G67120,AT1G13160,AT4G21850,AT2G33845,AT1G34020,AT4G04940,AT3G22660,AT1G75670,AT4G07410,AT1G63050,AT1G72090,AT4G10760,AT5G44370,AT2G19385,AT5G14050,AT1G49820,AT1G34130,AT5G05990,AT5G11240,AT2G47990,AT2G37400,AT4G05410,AT1G63810,AT2G34260,AT3G06530,AT5G59480,AT3G27280,AT1G07390,AT3G13940,AT2G39530,AT5G15550,AT1G55900,AT2G18900,AT1G31660,AT3G26840,AT1G15440,AT5G10830,AT3G23940,AT2G37990,AT5G61020,AT4G21150,AT3G20000,AT1G76160,AT5G02050,AT2G39020,AT1G19670,AT3G07430,AT5G19690,AT4G14420,AT3G24954,AT2G25110,AT1G48920,AT4G02940,AT3G59220,AT5G28540,AT2G02990,AT3G15460,AT5G61770,AT3G23620,AT4G01560,AT1G52930,AT3G46540,AT1G53645,AT1G14710,AT1G71210,AT2G17670,AT1G20300,AT4G35850,AT5G60960,AT1G61870,AT3G11964,AT5G06550,AT4G05400,AT3G15357,AT5G39600,AT1G79140,AT1G71850,AT1G73177,AT2G18220,AT5G49945,AT4G37290,AT1G70230,AT3G57380,AT3G60360,AT2G27775,AT5G12160,AT1G06720,AT3G59670,AT4G27900,AT2G34570,AT2G14460,AT1G14620,AT3G05810,AT5G38720,AT2G20940,AT1G73940,AT4G27380,AT4G36660,AT4G15640,AT5G65880,AT1G56580,AT1G14050,AT5G48240,AT1G69070,AT2G28600,AT2G44210,AT2G32580,AT3G49990,AT5G57280,AT1G28395,AT5G44570,AT3G19790,AT5G41190,AT5G27990,AT1G08580,AT4G20020,AT1G18850,AT5G62440,AT4G39300,AT2G15000,AT4G39840,AT4G29520,AT1G20310,AT5G53750,AT3G13230,AT5G12170,AT5G43970,AT3G16330,AT2G34070 BAENA-GONZALEZ_KIN10_OSS_UP Induced by KIN10 markedly overlaps with that induced by starvation conditions and is antagonized by increased sugar availability (600 genes). (Table S4 PubmedID:17671505) AT5G54080,AT4G33150,AT1G64660,AT1G03090,AT3G45300,AT4G34030,AT3G06850,AT1G21400,AT3G13450,AT1G55510,AT2G14170,AT3G30775,AT3G47340,AT1G10070,AT2G31810,AT2G38400,AT2G45170,AT3G06420,AT4G16520,AT1G80160,AT1G15380,AT1G53580,AT3G26100,AT2G18280,AT1G10340,AT5G56870,AT5G49360,AT1G32170,AT2G45220,AT1G67070,AT1G12780,AT1G63180,AT5G19120,AT5G04040,AT2G26560,AT4G28040,AT1G28330,AT1G56220,AT5G66170,AT4G37010,AT2G28720,AT5G58720,AT2G18050,AT1G06760,AT5G63190,AT4G15530,AT1G07110,AT3G49160,AT1G03400,AT3G19290,AT2G33830,AT3G15450,AT4G27260,AT2G38210,AT3G15500,AT5G58800,AT4G19860,AT5G16340,AT5G23050,AT3G51840,AT3G60510,AT5G18630,AT1G18460,AT5G41080,AT5G56100,AT2G19800,AT5G58730,AT5G20250,AT5G51970,AT1G58180,AT3G26220,AT3G26230,AT3G26170,AT3G26280,AT4G37330,AT3G60140,AT3G13750,AT3G57520,AT1G61820,AT3G61060,AT5G39580,AT2G28110,AT3G46690,AT2G43400,AT5G28050,AT1G55810,AT1G09420,AT2G13360,AT2G21430,AT5G47040,AT1G63800,AT1G80440,AT3G59940,AT3G06380,AT4G10925,AT1G77000,AT5G52120,AT5G21170,AT4G38470,AT1G35670,AT3G57770,AT1G04440,AT2G35680,AT4G11330,AT3G10550,AT2G20040,AT2G30500,AT1G16150,AT5G24490,AT4G20110,AT1G11530,AT5G06690,AT1G45145,AT4G16680,AT1G79700,AT5G49450,AT4G01120,AT4G39070,AT5G57660,AT1G69570,AT3G19580,AT2G19810,AT4G28270,AT5G55970,AT4G23450,AT1G68670,AT4G10920,AT5G47390,AT1G74840,AT3G04060,AT1G44770,AT3G61260,AT5G24520,AT3G48360,AT4G35770,AT5G22920,AT4G03510,AT5G24870,AT4G11360,AT1G02860,AT3G15070,AT5G24530,AT1G06570,AT1G30720,AT4G35750,AT5G52250,AT3G26740,AT4G08920,AT4G17080,AT1G80920,AT4G13830,AT1G23120,AT1G54410,AT1G19610,AT1G73260,AT1G67980,AT1G35580,AT1G12240,AT1G72150,AT5G04770,AT2G40420,AT3G26520,AT1G22570,AT2G24240,AT1G11260,AT1G77210,AT1G08920,AT5G13740,AT2G18700,AT1G70290,AT1G60140,AT1G23870,AT5G14470,AT4G25580,AT5G57655,AT2G32150,AT3G29240,AT1G18270,AT3G26510,AT5G63620,AT2G39570,AT2G44380,AT3G10740,AT1G15740,AT2G42890,AT3G51540,AT5G24890,AT2G03730,AT2G39400,AT3G14050,AT1G22930,AT5G06570,AT3G47160,AT3G13710,AT4G28030,AT1G58200,AT4G14500,AT2G44790,AT2G30600,AT3G06780,AT1G15045,AT1G15030,AT2G20670,AT5G39520,AT3G20340,AT2G40000,AT1G05340,AT2G31945,AT1G07040,AT4G32870,AT3G59930,AT3G49790,AT1G80180,AT1G54740,AT3G15630,AT1G22890,AT2G46220,AT1G25400,AT1G01240,AT2G38820,AT5G02160,AT5G51390,AT5G45310,AT5G02020,AT2G15890,AT5G40690,AT2G44010,AT2G36220,AT2G25200,AT3G55840,AT3G03870,AT4G25170,AT3G52060,AT2G30610,AT4G38060,AT1G03610,AT2G15695,AT3G52070,AT3G49590,AT3G56140,AT3G03150,AT4G19160,AT2G42900,AT5G59080,AT1G29760,AT1G28260,AT5G26734,AT1G10140,AT5G59960,AT1G66890,AT1G69890,AT1G27100,AT3G26890,AT5G54730,AT4G01026,AT1G42550,AT2G46550,AT3G07310,AT3G02140,AT1G03290,AT1G15010,AT1G02816,AT5G23340,AT1G80190,AT1G23710,AT1G03380,AT1G53400,AT3G15900,AT1G25275,AT4G00355,AT3G11620,AT5G40740,AT1G75190,AT1G12790,AT1G01770,AT1G67920,AT5G16180,AT3G03880 BAENA-GONZALEZ_KIN10_OSS_DN Depressed by KIN10 markedly overlaps with that induced by starvation conditions and is antagonized by increased sugar availability (600 genes). (Table S4 PubmedID:17671505) AT3G02760,AT1G31860,AT4G34200,AT4G35630,AT3G56070,AT5G48580,AT5G58710,AT1G04820,AT1G77550,AT5G65860,AT4G14960,AT3G13520,AT1G26770,AT1G69530,AT3G25140,AT5G45280,AT4G02330,AT3G49220,AT3G23820,AT3G29360,AT3G10530,AT2G34350,AT1G80530,AT2G40360,AT5G14520,AT5G39500,AT3G18600,AT4G26600,AT5G55915,AT3G57150,AT3G09720,AT5G56950,AT1G59990,AT5G35910,AT3G15080,AT1G03360,AT1G53310,AT1G20950,AT4G31810,AT1G27950,AT5G04950,AT1G69295,AT5G55050,AT4G36360,AT5G66680,AT1G76400,AT2G19670,AT4G31790,AT3G12270,AT3G28200,AT3G18280,AT1G19300,AT5G63400,AT3G01820,AT5G03300,AT3G09820,AT3G55010,AT2G35040,AT3G20330,AT1G29900,AT4G13890,AT4G38100,AT3G52500,AT5G36950,AT2G04160,AT3G03060,AT5G09800,AT4G26780,AT4G25340,AT3G13470,AT2G28000,AT5G16070,AT3G18130,AT5G61570,AT3G23000,AT1G11330,AT2G37710,AT3G08680,AT4G30930,AT1G64880,AT3G49080,AT4G10480,AT1G73180,AT1G33040,AT5G64670,AT2G42710,AT5G08180,AT5G20160,AT4G29410,AT4G22380,AT4G30800,AT3G06680,AT2G32220,AT1G07070,AT2G20450,AT3G44590,AT2G36620,AT1G80750,AT3G16780,AT5G61170,AT5G67510,AT3G58660,AT3G10610,AT4G12600,AT5G22440,AT4G25890,AT2G45710,AT4G10450,AT2G18400,AT3G06700,AT3G47370,AT1G26880,AT3G55280,AT3G07110,AT2G37600,AT2G32060,AT3G23390,AT2G21580,AT5G59850,AT1G27400,AT3G60245,AT4G17390,AT2G47610,AT5G39850,AT5G58420,AT3G22230,AT5G07090,AT3G04770,AT3G16080,AT4G31700,AT5G39740,AT4G15770,AT5G48760,AT4G26230,AT4G18730,AT3G05560,AT3G60770,AT2G27710,AT5G16130,AT3G25520,AT1G15250,AT5G64140,AT3G22300,AT5G47700,AT3G49010,AT3G28900,AT2G44120,AT1G34030,AT3G56340,AT4G15000,AT4G16720,AT5G60670,AT4G25740,AT3G58700,AT5G56710,AT1G72370,AT1G57660,AT2G33370,AT4G00100,AT5G10360,AT1G23290,AT3G09500,AT3G04920,AT1G15930,AT1G25260,AT2G31660,AT1G63940,AT1G60660,AT2G32920,AT1G77510,AT1G04980,AT3G54960,AT2G47470,AT4G25630,AT4G28450,AT1G49760,AT5G61030,AT3G23830,AT1G48570,AT3G03920,AT1G60850,AT3G57660,AT5G45140,AT3G25940,AT5G65640,AT4G34590,AT3G16870,AT5G18550,AT5G60690,AT2G27840,AT3G44750,AT5G22650,AT3G28910,AT2G19520,AT1G80270,AT1G56110,AT1G60770,AT5G27140,AT3G51800,AT3G05060,AT3G61820,AT1G23280,AT3G54400,AT5G15810,AT5G23290,AT5G44390,AT5G61790,AT1G09210,AT1G56340,AT1G48630,AT3G07050,AT1G30960,AT2G43130,AT3G23300,AT2G33210,AT3G23990,AT3G07770,AT4G24190,AT3G62600,AT5G49910,AT1G55210,AT2G17480,AT3G52340,AT3G15020,AT1G29310,AT5G01340,AT3G20240,AT2G29530,AT1G61570,AT5G50810,AT3G25120,AT3G22660,AT2G18900,AT5G02050,AT5G11240,AT1G13160,AT5G05990,AT2G34260,AT3G27280,AT1G55900,AT4G04940,AT1G31660,AT5G28540,AT5G19750,AT2G37990,AT3G13940,AT2G39795,AT5G61020,AT4G02400,AT4G05410,AT1G63810,AT5G59480,AT3G06530,AT3G23940,AT1G48920,AT4G21150,AT2G19385,AT2G25100,AT2G37400,AT5G10830,AT2G33845,AT3G20000,AT1G34130,AT1G34020,AT2G39020,AT3G48610,AT1G15440,AT2G25110,AT5G14050,AT5G19690,AT1G67120,AT3G07430,AT1G63050,AT5G16750,AT1G72280,AT3G15460,AT4G01560,AT3G23620,AT5G61770,AT1G52930,AT3G46540,AT1G53645,AT4G35850,AT2G17670,AT5G60960,AT1G20300,AT3G11964,AT5G06550,AT5G65880,AT4G39840,AT4G27380,AT1G14050,AT4G05400,AT1G56580,AT1G71850,AT4G36660,AT1G70230,AT5G48240,AT4G29520,AT1G73177,AT1G08580,AT1G28395,AT5G57280,AT2G34570,AT4G15640,AT2G28600,AT1G73940,AT5G62440,AT4G20020,AT2G18220,AT3G60360,AT1G14620,AT3G13230,AT2G27775,AT2G15000,AT2G44210,AT5G38720,AT3G05810,AT5G43970,AT2G20940,AT4G39300 COVINGTON_AUXIN_CIRCADIAN_UP Induced by auxin in expressed and circadian-Regulated (Table S3 PubmedID:17683202) AT1G23080,AT1G28130,AT5G43700,AT2G23180,AT2G45400,AT5G25460,AT5G63810,AT5G62220,AT5G54500,AT5G24590,AT5G13400,AT5G11740,AT3G62630,AT3G58120,AT4G38860,AT4G36010,AT1G69530,AT3G04910,AT3G01490,AT1G69160,AT1G64390,AT1G69295,AT1G18810,AT1G70940,AT1G04240,AT4G14550,AT5G48900,AT5G12050,AT4G09890,AT3G13980,AT1G78100,AT1G20190,AT2G36220,AT4G27260,AT5G54510,AT3G23030,AT4G32280,AT5G62280,AT5G52900,AT5G18060,AT5G02760,AT2G40610,AT1G29440,AT1G29500,AT1G29510,AT1G29460,AT1G29430,AT5G27780 COVINGTON_AUXIN_NOT-RHYTHMIC_UP Induced by auxin in expressed but Not Rhythmic (Table S3 PubmedID:17683202) AT3G23050,AT5G65670,AT4G28640,AT2G33310,AT2G24300,AT4G11280,AT3G29360,AT3G06370,AT2G28400,AT5G22860,AT2G32560,AT1G68880,AT1G23340,AT5G06320,AT3G49530,AT4G35320,AT3G55740,AT1G62770,AT1G64670,AT4G19460,AT2G43060,AT3G10720,AT1G68690,AT5G45280,AT3G26910,AT4G32350,AT3G15210,AT3G44720,AT4G37450,AT3G62110,AT5G37770,AT1G75240,AT3G61460,AT4G30996,AT2G18690,AT1G68620,AT5G13460,AT3G12700,AT5G48540,AT2G47140,AT3G05490,AT4G22780,AT2G15480,AT4G12720,AT2G35930,AT3G49220,AT4G02410,AT4G24570,AT1G49780,AT5G06930,AT2G15490,AT4G17460,AT1G34110,AT5G66920,AT4G39990,AT1G21830,AT5G19530,AT1G60730,AT4G13180,AT3G08760,AT5G51810,AT3G13000,AT4G39390,AT2G32580,AT3G17090,AT1G17620,AT5G13190,AT3G50900,AT1G29660,AT5G07000,AT2G40140,AT5G67430,AT3G26470,AT4G37295,AT2G30040,AT5G39580,AT1G22510,AT5G66310,AT1G76240,AT4G36500,AT3G23090,AT1G13670,AT2G38470,AT5G07110,AT1G60010,AT1G09250,AT4G27350,AT3G13430,AT1G59740,AT4G12110,AT2G43590,AT1G01120,AT5G66400,AT5G64250,AT3G26760,AT1G68810,AT4G22560,AT4G10150,AT5G27760,AT3G13380,AT1G69930,AT5G50760,AT2G39130,AT2G35880,AT4G36540,AT5G25170,AT1G62300,AT1G72790,AT3G28180,AT3G02550,AT2G41640,AT3G57550,AT4G22530,AT5G27420,AT2G18210,AT1G70550,AT5G10695,AT5G59550,AT1G02360,AT2G43290,AT4G18970,AT5G65270,AT5G45950,AT3G26980,AT1G15010,AT2G41730,AT3G12670,AT4G38840,AT4G13235,AT3G12610,AT3G60260,AT1G64980,AT4G04990,AT2G37940,AT3G54030,AT1G02400,AT1G34750,AT1G11545,AT3G60390,AT3G50260,AT5G03490,AT2G39870,AT3G50350,AT5G47800,AT1G43910,AT3G03170,AT3G52400,AT1G64405,AT5G66210,AT2G47860,AT3G23340,AT5G66080,AT1G76160,AT3G04640,AT1G62045,AT5G18930,AT2G35300,AT2G22830,AT3G11820,AT4G37590,AT5G57560,AT4G28490,AT4G32460,AT4G28703,AT1G65310,AT2G22500,AT1G32690,AT5G38710,AT1G02900,AT1G30820,AT5G50670,AT4G09570,AT4G39400,AT1G36940,AT1G18380,AT2G41820,AT4G30280,AT2G26710,AT5G12940,AT3G19380,AT5G41400,AT4G34760,AT2G45420,AT1G19020,AT1G78970,AT1G65920,AT3G25900,AT4G13195,AT2G32190,AT1G67810,AT4G31910,AT1G75500,AT1G10550,AT5G49630,AT4G25810,AT1G18400,AT5G64780,AT1G58340,AT2G41380,AT1G64640,AT1G21980,AT2G47130,AT4G17350,AT4G01950,AT4G38400,AT3G07010,AT4G37370,AT5G25190,AT4G27280,AT2G42430,AT3G25710,AT5G54490,AT5G15160,AT2G23170,AT4G14560,AT3G15540,AT5G64770,AT4G16515,AT3G50340,AT4G38850,AT3G42800,AT3G03830,AT4G30290,AT5G47370,AT2G32210,AT4G10160,AT5G50570 COVINGTON_AUXIN-NOT-EXPRESSED_UP Induced by auxin but not expressed (Table S3 PubmedID:17683202) AT4G37770,AT2G21220,AT5G67060,AT1G80840,AT5G50335,AT2G23270,AT5G04190,AT1G28370,AT5G04980,AT3G28210,AT2G21200,AT5G26930,AT5G06080,AT1G61340,AT3G09280,AT3G22140,AT4G37290,AT3G07000,AT3G23230,AT5G65610,AT1G11000,AT5G07530,AT5G53290,AT3G63440,AT4G39670,AT4G01110,AT3G23450,AT2G42440,AT4G17490,AT1G35140,AT4G25420,AT2G42380,AT3G55840,AT1G69570,AT2G35290,AT4G38820,AT2G32030,AT1G64560,AT3G45960,AT2G14960,AT3G62100,AT1G52830,AT1G22810,AT5G55250,AT4G34770,AT3G29370,AT3G58190,AT5G59010,AT5G09970,AT2G22810,AT2G32020,AT4G12410,AT4G37390,AT1G15580,AT2G37030,AT4G08040,AT1G29490,AT2G39370,AT3G03840,AT4G36110,AT2G18010,AT1G59500 ZENTELLA_GA_GA1-3_UP Up-GA-Responsive Genes in ga1-3 Data Set with Significant P Values (Table S1 PubmedID:17933900) AT1G10310,AT5G24090,AT1G79350,AT5G18420,AT5G39570,AT5G20350,AT5G38510,AT5G08180,AT5G46750,AT4G28220,AT5G23290,AT2G21185,AT1G55190,AT5G04420,AT5G05250,AT5G22310,AT5G12980,AT1G14440,AT3G01470,AT5G60970,AT5G16590,AT3G07010,AT2G38090,AT5G03555,AT3G60520,AT4G30850,AT5G08130,AT2G19310,AT1G54050,AT2G41940,AT3G50750,AT5G04410 ZENTELLA_GA_GA1-3_DN Down-GA-Responsive Genes in ga1-3 Data Set with Significant P Values (Table S1 PubmedID:17933900) AT2G45900,AT1G15550,AT5G51810,AT1G50420,AT4G19700,AT3G63010,AT3G05120,AT4G36410,AT2G04240,AT1G54120,AT1G56650,AT5G19340,AT4G23060,AT1G17830,AT5G18840,AT5G03670,AT1G29270,AT3G30180,AT1G68570,AT5G67480,AT5G47550,AT1G21250,AT5G05180,AT4G27730,AT4G36220,AT3G54320,AT2G41180,AT2G02080,AT1G76990,AT1G80870,AT3G61460,AT4G27300,AT1G69160,AT3G47160,AT3G19850,AT3G02910,AT3G52870,AT3G11280,AT4G38580,AT3G12670,AT4G31590,AT2G34340,AT2G31730,AT4G39630,AT2G33310,AT1G12050,AT2G22570,AT5G63000,AT4G30935,AT2G47890 ZENTELLA_GA_GA1-3-1H_UP Up-GA-Responsive Genes by ga1-3 at 1h in the atGenExpress Dataset (Table S2 PubmedID:17933900) AT2G16720,AT3G51660,AT1G78170,AT1G14920,AT1G07090,AT1G13710,AT1G66350,AT2G45680,AT2G01570,AT2G38750,AT2G22200,AT1G06360,AT5G49100,ATMG01270,AT1G69690,AT5G54970,AT5G65310,AT5G45670,AT1G13740,AT1G05700,AT1G03870,AT5G52430,AT4G08430,AT1G11545,AT1G26960,AT3G01410,AT3G07320,AT2G17640,AT4G10880,AT3G49780,AT1G07670,AT1G06180,AT5G56870,AT5G37790,AT2G23170,AT1G52200,AT3G05030,AT5G15840,AT1G19440,AT5G45800,AT1G19220,AT2G21320,AT5G02010,AT1G56020,AT2G16400,AT5G56220,AT3G21670,AT1G06350,AT1G07810,AT2G07696 ZENTELLA_GA_GA1-3-1H_DN Down-GA-Responsive Genes by ga1-3 ar 1h in the atGenExpress Dataset (Table S2 PubmedID:17933900) AT5G22940,AT5G66690,AT5G37740,AT4G34230,AT4G39140,ATMG00160,AT3G55950,AT2G25000,AT1G10480,AT1G66160,AT3G02885,AT1G30040,AT4G01960,AT4G34590,AT3G05180,AT2G38640,AT2G16750,AT1G13090,AT5G50900,AT4G01720,AT1G28100,AT1G74100,AT2G43290,AT5G62210,AT4G09510,AT3G61380,AT1G60590,AT5G60690,AT4G36970,AT3G03770,AT1G80850,AT3G07210,AT5G49710,AT4G19960,AT5G65640,AT2G34310,AT1G15490,AT1G12990,AT5G04890,AT1G18380,AT5G11060,AT1G13930,AT5G47620,AT2G45400,AT5G28300,AT1G23850,AT5G43910,AT4G40080,AT3G21420,AT4G37790,AT1G62960,AT1G25510,AT3G60550,AT3G27580,AT1G05710,AT3G45900,AT3G22760,AT1G46264,AT4G24670,AT1G33560,AT2G46700,AT3G46670,AT1G76900,AT5G36160,AT1G61660,AT5G27930,AT1G68580,AT5G54980,AT5G45340,AT4G14440,AT2G26170,AT5G41400,AT3G21690,AT4G24660,AT4G35550,AT5G41050,AT3G02910,AT5G48800,AT1G02860,AT1G20650,AT2G41890,AT1G15670,AT3G23410,AT2G39705,AT5G43180,AT5G05860,AT2G27230,AT2G31160,AT1G76990,AT1G23205,AT5G19730,AT3G05800,AT4G16447,AT5G40540,AT1G24530,AT1G31320,AT2G39220,AT5G01740,AT3G45260,AT2G26710,AT5G53420,AT3G13000,AT5G67480,AT1G21910,AT4G31800,AT2G43820,AT4G39510,AT1G28190,AT2G28400,AT5G17760,AT4G29190,AT4G24210,AT4G23060,AT5G19340,AT4G37240,AT2G45210,AT1G54120,AT2G04240,AT4G36110,AT3G05120,AT3G63010,AT4G19700,AT1G50420,AT5G51810,AT1G15550,AT2G45900 ZENTELLA_GA_0.5H_UP Up-GA-Responsive Genes 0.5h in the atGenExpress Dataset (Table S2 PubmedID:17933900) ATMG01270,AT2G38640,AT4G08430,AT1G78170,AT3G49780,AT1G10480,AT2G45680,AT5G22940,AT1G66160,AT5G45340,AT1G30040,AT5G04890,AT1G23850,AT1G69690,AT2G07696 ZENTELLA_GA_0.5H_DN Down-GA-Responsive Genes 0.5h in the atGenExpress Dataset (Table S2 PubmedID:17933900) AT2G26710,AT1G80850,AT3G45260,AT5G54980,AT1G15490,AT5G37740,AT5G48800,AT4G31800,AT2G21320,AT5G43180,AT5G67480,AT5G62210,AT2G45900,AT1G56020,AT4G24210,AT3G27580,AT1G05710,AT3G45900,AT2G16750,AT4G23060,AT2G39705,AT4G40080,AT4G37790,AT5G51810,AT4G37240,AT1G50420,AT1G28190,AT2G04240,AT1G61660,AT1G15670,AT4G10880,AT3G63010,AT1G15550,AT2G45210,AT4G16447,AT3G60550,AT1G31320,AT4G36110,AT1G21910,AT4G19700 ZENTELLA_GA_1H_UP Up-GA-Responsive Genes 1h in the atGenExpress Dataset (Table S2 PubmedID:17933900) AT1G52200,AT1G69690,AT1G05700,AT5G22940,AT1G30040,AT5G56870,AT2G22200,AT1G13740,AT1G10480,AT2G01570,AT1G18380,AT2G16720,AT1G19220,AT1G07090,AT5G15840,AT1G26960,ATMG01270,AT3G51660,AT1G66350,AT5G45340,AT2G23170,AT2G38640,AT1G14920,AT1G78170,AT2G45680,AT4G08430,AT2G07696 ZENTELLA_GA_1H_DN Down-GA-Responsive Genes 1h in the atGenExpress Dataset (Table S2 PubmedID:17933900) AT5G51810,AT1G15550,AT2G45900,AT4G19700,AT1G50420,AT3G63010,AT2G26710,AT2G04240,AT4G16447,AT2G28400,AT1G31320,AT3G23410,AT4G23060,AT4G31800,AT2G45210,AT3G05120,AT5G28300,AT4G01720,AT4G39510,AT5G67480,AT5G53420,AT1G21910,AT2G39705,AT4G24210,AT5G17760,AT1G23205,AT3G21420,AT4G36110,AT4G40080,AT3G21670,AT1G28190,AT3G02910,AT2G17640,AT5G40540,AT2G39220,AT3G05800,AT4G29190,AT5G41400,AT1G33560,AT1G54120,AT5G43180,AT1G20650,AT5G19730,AT1G24530,AT2G31160,AT4G37790,AT3G61380,AT1G62960,AT3G13000,AT2G27230,AT2G46700,AT3G02885,AT5G62210,AT4G10880,AT3G07210,AT2G16750,AT1G61660,AT1G15670,AT3G45260,AT3G46670,AT5G01740,AT4G19960,AT5G48800,AT5G19340,AT5G54980,AT3G45900,AT1G05710,AT5G11060,AT5G02010,AT3G03770,AT5G65640,AT5G43910,AT3G27580,AT5G41050,AT2G25000,AT1G76990,AT5G37740,AT2G26170,AT1G06180,AT2G21320,AT4G01960,AT2G45400,AT5G66690,AT3G60550,AT2G43820,AT4G34590,AT3G22760,AT2G16400,AT5G60690,AT1G76900,AT2G41890,AT1G80850,AT5G27930,AT4G14440,AT1G25510,AT1G46264,AT5G05860,AT5G36160,AT4G09510 ZENTELLA_GA_3H_UP Up-GA-Responsive Genes 3h in the atGenExpress Dataset (Table S2 PubmedID:17933900) AT4G08430,AT1G66350,AT2G23170,AT5G56870,AT3G51660,AT1G30040,AT5G45670,AT1G14920,ATMG01270,AT3G49780,AT1G78170,AT2G01570,AT2G38640,AT1G18380,AT1G06360,AT1G69690,AT1G26960,AT2G45680,AT5G37790,AT1G19220,AT1G11545,AT1G12990,AT1G05700,AT2G38750,AT5G52430,AT5G04890,AT1G03870,AT1G10480,AT2G43290,AT3G01410,AT1G07090,AT5G49100,AT5G65310,AT5G54970,AT3G55950,AT2G16720,AT1G13710,AT4G34230,AT1G74100,AT1G66160,ATMG00160,AT1G13740,AT3G07320,AT1G07670,AT5G22940,AT5G45340,AT2G22200,AT1G23850,AT5G50900,AT1G19440,AT1G06350,AT1G07810,AT2G07696 ZENTELLA_GA_3H_DN Down-GA-Responsive Genes 3h in the atGenExpress Dataset (Table S2 PubmedID:17933900) AT1G68580,AT5G47620,AT2G45400,AT5G56220,AT4G24660,AT4G39140,AT2G41890,AT2G34310,AT2G25000,AT5G27930,AT5G11060,AT5G37740,AT5G49710,AT4G01960,AT3G27580,AT1G61660,AT1G46264,AT5G43910,AT5G66690,AT5G45800,AT1G76900,AT3G45900,AT5G02010,AT4G40080,AT5G01740,AT3G21690,AT1G15490,AT1G24530,AT4G37790,AT4G37240,AT2G39705,AT3G45260,AT3G05030,AT1G76990,AT2G31160,AT5G48800,AT5G05860,AT1G13090,AT1G20650,AT4G10880,AT1G15670,AT5G65640,AT2G21320,AT2G16750,AT1G13930,AT2G26170,AT1G21910,AT2G46700,AT4G36970,AT4G09510,AT3G03770,AT4G01720,AT2G27230,AT4G19960,AT1G31320,AT4G14440,AT1G54120,AT3G21420,AT1G62960,AT1G28190,AT1G05710,AT1G28100,AT3G05800,AT5G19340,AT2G39220,AT3G60550,AT1G02860,AT3G05180,AT3G61380,AT4G24670,AT1G33560,AT2G17640,AT1G06180,AT5G43180,AT4G16447,AT5G53420,AT3G02910,AT3G13000,AT1G60590,AT3G22760,AT4G24210,AT4G35550,AT5G41050,AT3G21670,AT4G36110,AT4G29190,AT3G46670,AT5G19730,AT3G23410,AT5G67480,AT3G05120,AT5G40540,AT4G23060,AT2G43820,AT4G39510,AT5G28300,AT2G45210,AT1G23205,AT3G02885,AT5G62210,AT5G36160,AT5G17760,AT2G28400,AT2G04240,AT3G63010,AT1G50420,AT2G26710,AT4G19700,AT1G15550,AT5G51810,AT2G45900 ZENTELLA_DEX_VECTOR_UP Up-DEX-Regulated Genes in the Vector Control Dataset (Table S3 PubmedID:17933900) AT2G31980,AT4G13240,AT4G22640,AT4G13230,AT3G48950,AT5G51950,AT4G28460,AT1G76430,AT3G62280,AT3G29770,AT4G18540,AT2G02000,AT4G14250,AT1G28590,AT2G32020,AT2G42430,AT3G10590,AT1G65970,AT3G01840,AT5G24110,AT5G04970,AT1G23210,AT4G39320,AT1G30135,AT2G45560,AT5G65530,AT3G07600,AT1G23730,AT2G25820,AT5G67180,AT1G20350,AT5G65140,AT3G25250,AT5G42380,AT1G68450,AT2G39705,AT1G20900,AT3G11430,AT1G75930,AT5G64905,AT3G02840,AT3G01830,AT2G14960,AT5G58784,AT3G54720,AT3G12910,AT1G63530,AT1G74810,AT2G33710,AT2G15780,AT1G05577,AT1G18910,AT4G30520,AT3G51895,AT5G51490,AT1G16850,AT4G18550,AT3G01570,AT5G15140,AT4G22620,AT1G26330,AT1G26380,AT2G35980,AT5G37490,AT1G16420,AT1G32780,AT2G46410,AT2G18680,AT5G12930,AT3G25780,AT1G72520,AT4G31820,AT1G30740,AT5G28120,AT1G51920,AT4G13000,AT1G06620,AT1G20860,AT1G21010,AT5G44050,AT3G12040,AT1G21110,AT1G24140,AT4G23030,AT2G38490,AT3G24120,AT3G03530,AT3G02070,AT4G26470,AT1G11200,AT4G37370,AT1G32870,AT3G10500,AT1G69680,AT3G46960,AT3G21370,AT1G01720,AT5G03795,AT2G18560,AT3G10570,AT1G63540,AT1G11120,AT3G03670,AT1G70170,AT4G40080,AT5G23130,AT4G11360,AT3G19660,AT2G46310,AT1G20310,AT4G15140,AT2G19200,AT2G45100,AT4G21630,AT5G04250,AT2G17330,AT5G49570,AT4G30230,AT2G18690,AT1G07000,AT2G47190,AT4G36730,AT5G43410,AT5G57050,AT2G45550,AT5G27920,AT2G36220,AT3G03680,AT1G63380,AT1G07560,AT2G15480,AT2G35480,AT5G56970,AT5G48330,AT2G20780,AT3G50930,AT4G36010,AT2G32140,AT1G27820,AT1G71890,AT1G78990,AT4G00090,AT3G51330,AT3G10930,AT2G41220,AT1G64700,AT5G18000,AT3G19240,AT1G56080,AT2G35610,AT4G24530,AT4G15310,AT4G27940,AT5G04630,AT3G07320,AT5G52760,AT1G76070,AT1G80290,AT2G20720,AT3G03410,AT3G22370,AT5G04310,AT2G24180,AT4G27350,AT3G57950,AT3G02300,AT1G05790,AT4G36030,AT3G15970,AT5G47910,AT4G38470,AT2G46200,AT3G50200,AT2G32030,AT1G74590,AT4G03320,AT1G56150,AT3G16950,AT1G01560,AT3G14050,AT3G26980,AT3G03420,AT1G12640,AT1G33750,AT1G05960,AT1G17340,AT1G75110,AT1G61420,AT4G24050,AT4G27260,AT5G60160,AT3G09020,AT1G60610,AT1G80670,AT2G41370,AT2G25735,AT1G62422,AT1G78070,AT1G70710,AT2G17520,AT5G03870,AT3G47890,AT3G04580,AT3G25610,AT1G20450,AT2G32765,AT2G26680,AT2G36780,AT2G26560,AT1G70750,AT5G18550,AT1G67920,AT2G38580,AT4G38800,AT3G44960,AT1G02170,AT5G58210,AT2G20010,AT2G47000,AT5G12340,AT2G47140,AT1G05575,AT3G14610,AT3G01820,AT1G16540,AT5G58630,AT1G05060,AT4G35550,AT1G52910,AT1G26130,AT3G03020,AT5G09800,AT3G61530,AT5G41100,AT1G28600,AT2G20900,AT3G19870,AT5G04020,AT1G49520,AT1G49000,AT5G47490,AT4G20780,AT3G50270,AT5G52250,AT1G64740,AT4G23060,AT4G17260,AT1G62640,AT1G77660,AT5G22740,AT2G26530,AT5G42140,AT4G35480,AT4G37870,AT5G57480,AT2G34660,AT4G33430,AT5G42750,AT1G28610,AT1G10170,AT1G09940,AT4G16540,AT5G12130,AT4G36210,AT4G36220,AT4G36710,AT4G21380,AT5G19340,AT1G19370,AT3G06780,AT1G21130,AT1G63720,AT1G02750,AT1G77770,AT2G38360,AT5G64660,AT3G61760,AT3G20800,AT1G64710,AT1G28380,AT5G15190,AT5G49530,AT2G01180,AT4G20170,AT2G20300,AT3G26910,AT2G30250,AT2G37150,AT1G76700,AT4G28350,AT3G18270,AT5G03610,AT5G36890,AT2G39340,AT1G07240,AT5G48480,AT1G68330,AT2G46000,AT4G03820,AT1G12940,AT4G31130,AT5G66850,AT2G21380,AT2G35660,AT2G35340,AT3G04360,AT3G05580,AT1G13180,AT5G24240,AT5G01890,AT1G26665,AT4G19420,AT3G19990,AT3G06910,AT3G22990,AT2G45210,AT2G32080,AT1G20440,AT3G18380,AT4G14610,AT5G25930,AT1G60440,AT2G17510,AT5G37840,AT1G77250,AT1G64960,AT5G47960,AT3G13790,AT1G03740,AT5G39050,AT1G13340,AT5G23850,AT1G07030,AT2G02370,AT4G14365,AT2G37760,AT2G32380,AT1G54090,AT1G15430,AT5G39380,AT2G46260,AT3G01310,AT2G07180,AT3G25760,AT5G39410,AT5G04870,AT3G44280,AT4G21560,AT3G21630,AT3G18250,AT4G30360,AT3G52470,AT3G03220,AT4G24160,AT2G17990,AT5G48970,AT1G17420,AT3G16530,AT4G30890,AT1G53000,AT1G71697,AT5G56350,AT1G56020,AT5G19330,AT3G19010,AT2G34650,AT5G16630,AT3G52640,AT5G06560,AT1G02430,AT1G54030,AT5G42960,AT2G26970,AT5G42920,AT4G33050,AT3G21300,AT1G61250,AT5G67320,AT2G18350,AT5G48380,AT5G08120,AT3G63150,AT3G57130,AT1G80245,AT5G58640,AT4G19040,AT2G46610,AT4G28550,AT3G57180,AT5G16590,AT5G64920,AT5G24810,AT5G57060,AT5G08335,AT5G39020,AT2G38870,AT2G42680,AT5G66320,AT2G06530,AT5G66200,AT1G31930,AT5G50740,AT5G44260,AT1G11390,AT4G32150,AT5G66050,AT3G19930,AT2G16390,AT2G13790,AT2G39920,AT1G68140,AT1G22770,AT1G19270,AT5G18400,AT1G60390,AT5G20900,AT1G05710,AT1G60420,AT1G02440,AT1G11180,AT1G21120,AT1G59550,AT1G60740,AT1G62610,AT2G02010,AT2G03020,AT2G13800,AT2G18570,AT2G29720,AT2G36770,AT3G03540,AT3G25770,AT3G47910,AT5G28110 ZENTELLA_DEX_VECTOR_DN Down-DEX-Regulated Genes in the Vector Control Dataset (Table S3 PubmedID:17933900) AT4G30490,AT5G57930,AT1G60890,AT5G54510,AT3G50740,AT3G20600,AT2G01150,AT2G05920,AT1G01430,AT1G19050,AT4G14930,AT1G19300,AT5G08130,AT4G33220,AT3G16370,AT4G33080,AT3G25560,AT2G24490,AT5G01920,AT4G27830,AT1G66150,AT3G17420,AT5G07220,AT3G43270,AT1G57590,AT1G01420,AT5G15350,AT5G67100,AT1G30610,AT2G26910,AT4G34590,AT2G43535,AT2G22540,AT2G27080,AT3G48720,AT5G44820,AT5G03555,AT2G28130,AT2G45960,AT3G62700,AT1G72510,AT3G44990,AT1G53700,AT4G08950,AT1G18020,AT1G19660,AT1G61890,AT3G14620,AT4G30470,AT3G54920,AT2G22080,AT1G26150,AT1G70670,AT5G49160,AT5G11250,AT3G03770,AT4G30610,AT3G23160,AT2G36830,AT1G78670,AT1G32090,AT4G02630,AT1G54740,AT2G45450,AT1G03820,AT4G16490,AT1G58360,AT5G55740,AT3G62860,AT3G45260,AT1G64860,AT3G28200,AT1G67480,AT4G16370,AT4G03190,AT2G29450,AT1G21680,AT1G70230,AT5G27350,AT5G26820,AT5G44020,AT4G16670,AT1G53730,AT1G04240,AT3G50660,AT3G22760,AT4G38690,AT3G15840,AT2G46710,AT1G68780,AT5G05180,AT4G20260,AT4G23400,AT1G75390,AT3G27960,AT4G25910,AT1G51500,AT2G43910,AT1G73660,AT5G24165,AT3G61460,AT4G39510,AT5G59920,AT3G43720,AT3G13000,AT2G37330,AT5G49360,AT3G10525,AT3G03470,AT3G61430,AT3G56040,AT2G28950,AT1G10380,AT2G42320,AT5G53760,AT5G11070,AT1G62770,AT1G44446,AT1G51400,AT3G49670,AT1G79380,AT1G55370,AT4G18970,AT5G43060,AT5G13930,AT1G29670,AT3G45600,AT2G16630,AT4G01070,AT1G08810,AT5G24570,AT1G21670,AT1G79720,AT2G28080,AT2G30080,AT5G04490,AT1G17230,AT1G31920,AT5G45380,AT3G14840,AT1G69440,AT1G69530,AT4G13840,AT1G14700,AT5G51560,AT5G44390,AT1G33811,AT5G19600,AT2G36080,AT5G54380,AT1G73630,AT5G16600,AT3G54400,AT3G28040,AT3G05160,AT4G08470,AT3G06750,AT3G56810,AT3G26590,AT1G80050,AT1G65900,AT3G29030,AT3G25710,AT1G66350,AT5G39610,AT5G56270,AT1G52290,AT4G22470,AT1G07570,AT2G27660,AT4G34230,AT1G19150,AT2G43140,AT2G28200,AT4G11460,AT1G61667,AT1G18880,AT5G20935,AT5G47560,AT1G11700,AT3G08940,AT1G55330,AT3G16770,AT2G34620,AT4G34220,AT3G51670,AT1G64170,AT1G12240,AT5G22920,AT3G50770,AT3G42570,AT3G12830,AT5G28030,AT5G45950,AT5G15580,AT3G58120,AT3G23430,AT3G02380,AT2G22190,AT3G06070,AT3G18050,AT5G63710,AT5G64620,AT1G66180,AT5G64330,AT2G46690,AT2G16430,AT1G14440,AT5G63410,AT4G20070,AT5G23870,AT1G10470,AT3G14560,AT1G15260,AT2G33060,AT1G79110,AT5G07000,AT4G38860,AT4G03400,AT3G12710,AT5G06530,AT3G19850,AT1G74670,AT2G23170,AT5G47370,AT5G65730,AT1G19960,AT3G02170,AT5G60850,AT1G29430,AT5G62360,AT3G27690,AT1G17990,AT1G18890,AT1G70680,AT1G75380,AT2G09970,AT2G33050,AT2G43920,AT3G05165,AT3G17070,AT3G20590,AT4G01350,AT5G27780 ZENTELLA_PUTATIVE-DELLA_2HR_DEX_UP Up-Putative DELLA-Regulated Genes 2hr in the DEX-(rga-D17) Dataset. (Table S4 PubmedID:17933900) AT2G40970,AT2G45900,AT1G64405,AT4G36410,AT5G62730,AT3G62580,AT2G45570,AT3G58060,AT2G37980,AT1G18610,AT2G24550,AT4G25580,AT1G30700,AT1G59950,AT3G48520,AT1G49620,AT2G19440,AT5G18590,AT5G13220,AT1G31550,AT1G64780,AT5G50915,AT5G04040,AT5G52830,AT4G28560,AT1G61810,AT5G04640,AT3G60530,AT5G51810,AT5G07500,AT4G31800,AT1G14460,AT3G26290,AT1G50420,AT1G74010,AT4G35985,AT4G36790,AT3G63200,AT5G65040,AT5G10130,AT1G75860,AT3G53800,AT5G46910,AT2G41705,AT3G50700,AT5G47060,AT3G22420,AT5G43810,AT5G02180,AT1G67100,AT1G79400,AT3G20300,AT4G40050,AT4G30940,AT1G54100,AT3G58620,AT3G63010,AT3G01720,AT4G08930,AT5G62570,AT1G72800,AT1G18620,AT2G45580,AT1G66550,AT3G47540,AT5G48430,AT3G50260,AT2G35110,AT3G26320,AT5G42320,AT1G08550,AT1G59660,AT2G38570,AT5G56980,AT3G58040,AT1G75370,AT4G37020,AT5G39080,AT4G02420,AT1G18570,AT3G11280,AT3G14230,AT1G75180,AT5G61560,AT1G01260,AT5G07820,AT1G32860,AT5G13570,AT3G26200,AT1G03560,AT2G32800,AT5G59400,AT1G74020,AT3G60440,AT1G17460,AT5G05320,AT5G04310,AT2G28840,AT3G57520,AT3G13040,AT3G13070,AT3G21420,AT5G11890,AT1G10740,AT4G25970,AT4G14400,AT1G27690,AT5G01960,AT1G09570,AT1G47380,AT1G19020,AT2G47010,AT1G60960,AT5G55700,AT1G30730,AT1G76090,AT3G54950,AT3G63380,AT1G18840,AT5G01180,AT5G18900,AT1G17145,AT4G30935,AT2G31730,AT3G29575,AT3G50410,AT1G16510,AT2G43040,AT4G30350,AT3G14090,AT1G54130,AT1G09630,AT3G54140,AT4G18010,AT5G10290,AT3G54030,AT2G23130,AT3G13430,AT2G46990,AT3G50070,AT5G18630,AT5G11020,AT3G19260,AT5G54110,AT5G65890,AT1G60620,AT5G53210,AT2G19160,AT1G19180,AT1G02816,AT1G22360,AT3G11420,AT2G38970,AT5G23670,AT5G61620,AT3G61150,AT2G37750,AT4G25420,AT1G03430,AT4G36360,AT1G54060,AT5G46780,AT2G46220,AT4G37990,AT2G04240,AT5G13740,AT2G39570,AT5G05440,AT2G39360,AT4G34100,AT1G14580,AT4G24760,AT1G64330,AT5G62740,AT2G45590,AT5G05480,AT5G62220,AT1G04780,AT4G27980,AT1G68440,AT3G15940,AT5G66440,AT5G45130,AT1G56010,AT1G77460,AT1G18850,AT5G24280,AT2G30070,AT5G67480,AT2G36750,AT1G07350,AT1G17455,AT1G52310,AT5G58140,AT1G16170,AT2G02990,AT1G55830,AT1G33590,AT4G14230,AT3G52190,AT1G14890,AT2G34770,AT2G01850,AT3G15070,AT4G19700,AT1G63850,AT3G19770,AT1G16010,AT2G06050,AT4G14410,AT1G22400,AT5G18390,AT2G24170,AT3G49310,AT3G58670,AT2G36810,AT1G28580,AT4G29190,AT1G67750,AT4G05060,AT1G53710,AT1G59910,AT4G24210,AT1G43700,AT4G37740,AT2G39660,AT1G16730,AT4G39140,AT5G56790,AT3G18490,AT1G62960,AT1G48960,AT5G40540,AT1G76600,AT1G14740,AT1G34550,AT1G02000,AT5G64370,AT5G12120,AT2G23980,AT1G70940,AT3G50240,AT3G48000,AT2G31230,AT4G28400,AT1G20160,AT4G17615,AT5G09450,AT3G62360,AT5G43310,AT1G71710,AT1G69523,AT5G47130,AT3G06060,AT1G60010,AT3G03110,AT3G59290,AT1G20840,AT2G02450,AT5G67470,AT5G01810,AT1G21640,AT3G01640,AT3G05490,AT3G13380,AT1G30720,AT2G19170,AT2G32810,AT3G15060,AT3G62590,AT5G05470,AT5G58150 ZENTELLA_PUTATIVE-DELLA_2HR_DEX_DN Down-Putative DELLA-Regulated Genes 2hr in the DEX-(rga-D17) Dataset. (Table S4 PubmedID:17933900) AT3G47250,AT4G15680,AT3G50900,AT1G18400,AT2G44080,AT2G38750,AT5G08520,AT1G13260,AT1G24280,AT4G00370,AT1G09240,AT5G15210,AT1G23030,AT1G68530,AT4G25830,AT1G28670,AT3G28050,AT1G72430,AT3G10760,AT4G19530,AT5G13400,AT4G25620,AT5G62920,AT3G26630,AT5G25280,AT2G45680,AT4G37470,AT5G09460,AT1G26920,AT1G61740,AT1G26960,AT1G23480,AT3G26740,AT1G24260,AT3G28910,AT2G32540,AT5G03760,AT1G64400,AT1G73830,AT4G17245,AT5G57630,AT1G33240,AT2G21180,AT4G15550,AT1G21460,AT1G72180,AT4G18210,AT5G40170,AT5G55620,AT2G40475,AT4G38840,AT5G17700,AT5G64770,AT2G46720,AT1G78020,AT1G12110,AT1G49220,AT3G26960,AT1G78000,AT5G57340,AT5G02480,AT1G05805,AT3G52870,AT2G18300,AT4G03070,AT1G70300,AT5G01740,AT1G13110,AT5G56870,AT1G13080,AT5G57800,AT2G29090,AT1G29660,AT1G07720,AT2G27690,AT1G22500,AT3G19030,AT5G22270,AT2G21220,AT2G20180,AT5G12050,AT5G02890,AT2G28630,AT5G02540,AT5G02760,AT1G54820,AT4G36540,AT5G56300,AT3G55130,AT1G49200,AT3G10280,AT4G00360,AT4G25610,AT1G49210 ZENTELLA_PUTATIVE-DELLA_4HR_DEX_UP Up-Putative DELLA-Regulated Genes 4hr in the DEX-(rga-D17) Dataset. (Table S4 PubmedID:17933900) AT2G40970,AT5G51810,AT2G45900,AT1G61810,AT3G58060,AT4G36410,AT3G48520,AT2G45570,AT4G25580,AT1G64405,AT1G30700,AT5G62730,AT5G13220,AT5G50915,AT2G41730,AT2G40435,AT1G59950,AT1G67100,AT1G50420,AT5G61620,AT5G07500,AT1G59660,AT1G58300,AT2G46990,AT2G37980,AT3G26290,AT5G10130,AT5G24280,AT5G52830,AT1G66550,AT2G24550,AT1G64780,AT3G20300,AT1G54100,AT4G14400,AT2G36750,AT3G60530,AT2G19440,AT5G01180,AT3G63010,AT3G47540,AT4G28560,AT1G31550,AT5G43810,AT2G20500,AT1G56010,AT1G74010,AT4G08930,AT1G72800,AT4G25420,AT3G60440,AT2G34340,AT3G63200,AT1G18570,AT1G14580,AT5G04040,AT3G26320,AT3G26280,AT1G14460,AT1G32860,AT5G13170,AT5G04640,AT1G62300,AT3G53800,AT2G45580,AT3G22420,AT1G20840,AT1G18610,AT4G35985,AT3G21420,AT3G50700,AT3G62580,AT5G47060,AT1G20160,AT1G52770,AT5G65040,AT1G79400,AT5G62570,AT3G14230,AT5G02180,AT4G27980,AT4G36790,AT3G50070,AT4G37020,AT3G11280,AT3G01720,AT5G18590,AT4G36360,AT5G11020,AT1G09570,AT1G75370,AT1G08550,AT2G31230,AT2G41705,AT1G15550,AT5G46910,AT2G28840,AT4G25970,AT1G16510,AT5G07820,AT3G50260,AT1G03430,AT4G40050,AT1G09630,AT2G43040,AT3G19260,AT5G11890,AT1G77460,AT2G47010,AT1G67750,AT2G35110,AT5G18900,AT1G03560,AT1G49620,AT1G26770,AT2G02990,AT3G54320,AT3G54030,AT5G45650,AT2G37750,AT5G07180,AT1G74020,AT1G18840,AT3G63380,AT1G75730,AT4G02420,AT3G11420,AT2G33330,AT5G45130,AT5G67470,AT3G48000,AT1G14890,AT5G56790,AT1G17460,AT1G30730,AT5G53210,AT4G17615,AT5G39080,AT2G38570,AT4G31800,AT5G05480,AT1G19020,AT5G42320,AT1G75860,AT1G76090,AT5G40540,AT3G50410,AT2G31730,AT3G03110,AT3G59290,AT1G59520,AT2G19160,AT3G58040,AT1G35460,AT1G54130,AT5G47130,AT5G51070,AT5G62390,AT3G29575,AT4G30940,AT1G60960,AT2G34810,AT3G22104,AT2G39360,AT1G33590,AT1G02816,AT1G16730,AT3G62360,AT4G19700,AT2G34310,AT5G54110,AT5G05320,AT5G55700,AT3G56950,AT1G76600,AT3G13070,AT3G54140,AT1G01260,AT5G61560,AT1G17145,AT3G54950,AT5G36160,AT2G38970,AT2G24170,AT2G30070,AT1G54060,AT2G43710,AT4G37990,AT1G17455,AT1G28010,AT5G01810,AT5G58140,AT5G59400,AT4G11600,AT3G05120,AT5G52450,AT5G13740,AT5G64370,AT3G14150,AT1G18850,AT1G34550,AT5G10290,AT2G04240,AT3G61150,AT1G64330,AT5G27760,AT3G58670,AT3G26200,AT4G24210,AT1G48960,AT3G13040,AT2G18170,AT5G13810,AT3G50240,AT5G56980,AT4G30350,AT2G34770,AT2G15570,AT3G15940,AT2G46700,AT1G01470,AT5G05440,AT5G15050,AT2G31200,AT2G32800,AT4G04470,AT5G10350,AT1G69523,AT1G16170,AT2G15790,AT1G60220,AT3G08710,AT2G45740,AT2G02450,AT3G13380,AT2G37180,AT4G09510,AT5G14950,AT1G47310,AT1G04780,AT2G06050,AT5G01960,AT4G02010,AT3G58620,AT5G66530,AT4G39140,AT1G58440,AT5G24400,AT1G22360,AT4G29190,AT4G36970,AT3G06060,AT2G23980,AT3G18295,AT3G18490,AT1G69960,AT2G39725,AT3G27770,AT4G28050,AT5G65890,AT1G71830,AT1G55830,AT1G19730,AT2G36130,AT1G30360,AT5G34940,AT4G23820,AT1G68440,AT2G23120,AT2G47490,AT3G04870,AT5G48430,AT4G24760,AT3G05800,AT3G49310,AT1G22540,AT3G01640,AT5G04310,AT5G67060,AT1G63850,AT3G19770,AT1G30720,AT2G19170,AT2G32810,AT3G04880,AT3G62590,AT5G05470,AT5G33210,AT5G58150 ZENTELLA_PUTATIVE-DELLA_4HR_DEX_DN Down-Putative DELLA-Regulated Genes 4hr in the DEX-(rga-D17) Dataset. (Table S4 PubmedID:17933900) AT3G19030,AT2G27690,AT2G16700,AT4G27520,AT1G72430,AT2G30010,AT4G19530,AT2G30520,AT1G18400,AT2G22430,AT1G04250,AT5G18680,AT1G68530,AT1G33600,AT5G04530,AT1G13080,AT5G08330,AT1G10550,AT4G00370,AT5G61660,AT5G13400,AT5G40170,AT2G21180,AT1G26960,AT4G36920,AT5G44190,AT5G44910,AT2G45680,AT4G25620,AT4G03070,AT4G17245,AT5G15410,AT3G54200,AT4G35750,AT4G23570,AT3G28910,AT4G15680,AT5G55620,AT1G51805,AT2G16380,AT3G11660,AT3G23050,AT5G12960,AT1G52190,AT4G01330,AT1G24280,AT3G52870,AT5G62680,AT1G12110,AT2G44080,AT5G03120,AT2G40475,AT1G11350,AT4G25830,AT1G22500,AT4G18210,AT2G39400,AT1G13260,AT1G61740,AT3G02140,AT3G43800,AT5G01730,AT3G26740,AT1G78020,AT2G42620,AT5G11420,AT4G37470,AT1G49220,AT1G64400,AT1G13110,AT1G24260,AT1G33240,AT5G57800,AT5G58660,AT1G72180,AT4G38840,AT2G31120,AT5G44130,AT4G36540,AT5G02890,AT1G75900,AT2G18300,AT5G12050,AT1G70560,AT2G29090,AT1G68585,AT3G26450,AT2G37540,AT1G26920,AT1G09240,AT5G04860,AT1G02220,AT2G38750,AT1G23480,AT2G46720,AT5G03760,AT5G62920,AT1G66400,AT1G07720,AT5G17700,AT5G02760,AT4G30670,AT5G56870,AT5G02540,AT2G30930,AT5G64770,AT5G22270,AT3G55130,AT3G62820,AT2G28630,AT1G29660,AT2G21220,AT5G56300,AT1G49200,AT3G10280,AT4G00360,AT4G25610,AT5G12950,AT5G62670,AT1G49210 HU_YHB-D/WT-D_UP Up-regulated 2-fold in YHB-D /WT-D (Table S1 PubmedID:19529817) AT5G22500,AT4G35720,AT5G63650,AT5G51210,AT2G47780,AT5G53250,AT4G30290,AT5G53660,AT1G02340,AT1G75780,AT5G54190,AT2G34020,AT4G13790,AT4G22490,AT3G12820,AT5G02580,AT1G02205,AT1G08500,AT1G64390,AT4G22460,AT4G36010,AT5G66590,AT2G31980,AT1G75900,AT3G14370,AT5G60660,AT4G11190,AT3G48460,AT4G32460,AT5G47450,AT1G64110,AT2G33380,AT5G07010,AT2G32990,AT4G33550,AT4G02290,AT5G19100,AT4G21830,AT1G73120,AT2G43050,AT1G52830,AT4G36110,AT5G38710,AT5G53980,AT5G01320,AT4G29690,AT2G19660,AT4G10240,AT4G14130,AT5G12940,AT3G48970,AT5G42500,AT4G12510,AT5G42860,AT3G05150,AT1G02800,AT1G06080,AT4G29270,AT3G59010,AT1G12080,AT5G10430,AT4G16670,AT5G07030,AT2G43060,AT5G15290,AT4G21850,AT4G12880,AT4G11290,AT4G14465,AT5G57670,AT1G72290,AT1G64640,AT4G10020,AT5G46960,AT4G34770,AT1G15550,AT4G30650,AT5G48900,AT1G63380,AT2G14900,AT2G38530,AT5G02260,AT2G37870,AT1G01600,AT3G05920,AT5G59010,AT1G70990,AT1G53035,AT1G10480,AT3G15540,AT5G65800,AT1G52690,AT1G67750,AT3G10340,AT3G17790,AT2G28780,AT5G55730,AT2G21910,AT4G32280,AT4G25420,AT3G05950,AT1G45130,AT4G20320,AT2G22970,AT1G19300,AT5G18060,AT4G11610,AT1G65920,AT4G25260,AT1G10550,AT2G20750,AT1G70710,AT5G44440,AT3G12610,AT4G29700,AT1G01390,AT5G15150,AT4G17695,AT4G16515,AT2G47000,AT3G54770,AT1G11545,AT5G52310,AT4G38580,AT5G02890,AT5G13870,AT3G05890,AT2G21880,AT1G73220,AT1G64380,AT1G29195,AT1G67810,AT2G37670,AT2G29440,AT1G23060,AT5G50335,AT5G45280,AT5G49630,AT2G38750,AT4G36880,AT5G63810,AT1G80280,AT5G03260,AT5G60760,AT1G49570,AT2G18010,AT1G77330,AT5G41900,AT3G51410,AT1G31070,AT4G23690,AT3G42800,AT3G22840,AT4G11320,AT4G23700,AT2G32300,AT3G07010,AT4G16780,AT4G35350,AT3G50890,AT3G23090,AT3G25290,AT3G28180,AT3G25730,AT1G70270,AT5G53190,AT3G11550,AT4G13580,AT2G34315,AT2G46990,AT3G15670,AT3G08030,AT5G18690,AT1G62480,AT1G02400,AT5G65390,AT1G04220,AT4G17280,AT1G29050,AT1G76790,AT5G42180,AT3G21190,AT1G20190,AT3G03170,AT5G67060,AT1G66350,AT1G16850,AT1G75450,AT4G23030,AT4G26320,AT1G44830,AT4G30410,AT2G01150,AT2G34700,AT3G03240,AT5G40730,AT1G53830,AT2G34500,AT3G45960,AT1G05260,AT5G15490,AT1G28330,AT5G15580,AT3G26460,AT3G50900,AT2G44450,AT1G13280,AT5G60100,AT3G07990,AT1G05490,AT1G64660,AT1G62280,AT2G41070,AT1G04820,AT5G24910,AT4G13210,AT4G16146,AT2G38090,AT5G14180,AT1G67910,AT5G01790,AT4G19120,AT1G70210,AT1G69526,AT1G55210,AT2G32430,AT1G31850,AT5G47240,AT1G29980,AT5G63590,AT4G17340,AT4G36930,AT5G44610,AT3G52180,AT1G22770,AT2G21540,AT3G53980,AT3G13650,AT5G65020,AT4G37890,AT1G01470,AT5G66390,AT2G35760,AT5G60020,AT3G01260,AT3G29575,AT5G06200,AT5G24580,AT2G02820,AT3G18200,AT4G18970,AT5G17910,AT3G54700,AT1G23760,AT2G39350,AT2G39430,AT2G21640,AT1G73640,AT1G08310,AT2G25160,AT5G25610,AT5G15720,AT2G24300,AT5G15230,AT1G63220,AT1G14120,AT1G07090,AT5G09440,AT3G57780,AT4G35150,AT3G16490,AT1G09570,AT1G62790,AT1G20450,AT2G26440,AT3G10985,AT4G01140,AT1G04680,AT4G33220,AT1G56580,AT3G55310,AT5G17700,AT5G39320,AT1G44970,AT4G37580,AT2G28670,AT3G59695,AT5G11540,AT1G27670,AT3G20470,AT5G56540,AT1G02220,AT1G32100,AT2G47270,AT1G06360,AT4G35190,AT3G19390,AT2G35820,AT5G22740,AT5G14920,AT3G51895,AT3G54950,AT2G27370,AT1G04770,AT2G44740,AT1G33170,AT1G72070,AT3G24720,AT1G35260,AT5G28080,AT5G58600,AT4G23680,AT5G57760,AT1G32170,AT2G30210,AT4G27440,AT2G22900,AT2G21620,AT2G40475,AT3G17820,AT2G22560,AT5G11970,AT3G48550,AT5G61660,AT1G06980,AT1G61800,AT5G66460,AT1G17430,AT3G29370,AT1G18400,AT2G28085,AT3G59900,AT5G53420,AT5G08000,AT2G37640,AT1G70830,AT1G04990,AT1G62770,AT1G70900,AT1G61260,AT4G30670,AT5G40020,AT2G17500,AT4G39840,AT2G35860,AT2G06200,AT1G78210,AT4G22130,AT3G16180,AT4G37740,AT2G36100,AT2G17840,AT3G62020,AT5G10930,AT3G27200,AT4G00820,AT3G53200,AT1G06850,AT5G25460,AT1G80240,AT4G14010,AT1G60060,AT4G39070,AT5G66080,AT4G37010,AT4G30060,AT2G22500,AT1G04250,AT1G30750,AT5G23750,AT3G06035,AT4G30340,AT1G77870,AT5G22580,AT4G28720,AT2G32280,AT5G07110,AT3G61930,AT1G17810,AT5G14790,AT5G59220,AT1G72230,AT5G66170,AT2G35880,AT5G59320,AT1G29460,AT3G61490,AT4G15330,AT1G17620,AT3G17420,AT1G64330,AT4G16260,AT2G14210,AT2G12400,AT5G17860,AT2G42570,AT1G77200,AT1G78060,AT5G43520,AT1G52000,AT1G17700,AT2G30870,AT4G23885,AT1G76240,AT3G48100,AT1G21980,AT3G11340,AT3G61830,AT5G67390,AT4G26670,AT1G04040,AT2G19590,AT4G08685,AT1G50560,AT1G01780,AT1G71740,AT4G04610,AT1G01120,AT5G64640,AT3G55890,AT2G21140,AT2G27550,AT3G24450,AT1G64670,AT4G35560,AT3G44990,AT1G01200,AT1G17190,AT1G72470,AT2G21100,AT2G35210,AT4G37390,AT3G14220,AT3G22620,AT5G46240,AT1G11600,AT3G02480,AT3G24290,AT1G27030,AT4G21990,AT3G16920,AT4G28650,AT5G02200,AT1G76180,AT1G14350,AT4G18425,AT2G40610,AT1G26960,AT2G36490,AT4G20890,AT4G01700,AT1G63140,AT5G59570,AT1G11000,AT4G29520,AT3G01220,AT3G14440,AT1G11960,AT1G15380,AT3G52870,AT5G02550,AT5G63180,AT4G30400,AT5G57110,AT1G32640,AT4G21600,AT2G43535,AT2G24170,AT1G19180,AT3G02620,AT1G13860,AT2G45290,AT4G35060,AT1G20070,AT5G25190,AT2G33060,AT1G02810,AT3G49220,AT1G20160,AT4G25280,AT5G47060,AT4G26390,AT5G12250,AT4G08160,AT5G39860,AT2G42010,AT2G05520,AT5G20150,AT1G53180,AT4G39260,AT5G49100,AT4G17220,AT4G20110,AT1G78570,AT1G04240,AT2G37130,AT5G45670,AT3G62270,AT5G07820,AT1G53310,AT1G07420,AT5G28300,AT2G38080,AT4G39950,AT1G43910,AT5G66330,AT3G61820,AT5G04200,AT5G23530,AT5G03150,AT1G09310,AT5G03530,AT4G12550,AT4G30140,AT2G39920,AT1G70560,AT5G22460,AT4G14290,AT4G23870,AT5G49800,AT2G36830,AT5G57480,AT1G12110,AT1G24625,AT3G05880,AT2G44910,AT2G46140,AT1G62990,AT1G22180,AT4G33750,AT1G07740,AT2G02990,AT1G62660,AT1G30080,AT3G07390,AT4G39330,AT4G30420,AT5G20740,AT4G04460,AT1G62800,AT2G34150,AT1G78000,AT4G30190,AT5G54970,AT1G74650,AT4G23710,AT5G14550,AT5G50200,AT2G45050,AT1G68560,AT2G21660,AT5G10580,AT1G80160,AT5G22880,AT5G52300,AT2G37940,AT4G05390,AT3G12710,AT3G18000,AT1G29500,AT2G42610,AT3G15720,AT1G19510,AT2G38360,AT3G60070,AT5G66650,AT4G14960,AT4G38230,AT5G05960,AT1G52250,AT5G39410,AT5G11150,AT1G26820,AT1G05170,AT5G66210,AT5G58700,AT1G78970,AT5G61900,AT4G16442,AT4G22590,AT2G34300,AT5G53710,AT3G60140,AT5G41400,AT5G23860,AT1G55260,AT3G56480,AT3G10260,AT4G10250,AT3G59930,AT5G02190,AT5G59930,AT4G18800,AT1G61590,AT1G74010,AT5G57830,AT1G69690,AT1G52190,AT1G62570,AT2G27140,AT3G60450,AT1G18970,AT5G23220,AT3G48520,AT5G20700,AT5G66280,AT4G05120,AT5G51060,AT5G63820,AT2G17710,AT2G37750,AT1G76500,AT2G21060,AT2G41740,AT2G35190,AT1G20440,AT3G20015,AT3G28910,AT1G29440,AT5G03170,AT2G33570,AT2G34650,AT4G15400,AT2G32580,AT4G35630,AT1G55240,AT1G80520,AT1G27380,AT2G45210,AT3G05490,AT3G29360,AT1G55265,AT1G53070,AT4G37070,AT3G15020,AT5G54690,AT2G37280,AT1G75500,AT1G17020,AT4G21680,AT4G30170,AT5G02560,AT2G16720,AT1G77510,AT5G61570,AT2G46780,AT5G25110,AT4G00700,AT2G38500,AT1G09200,AT5G15050,AT4G11820,AT1G55760,AT4G31500,AT4G05170,AT5G03630,AT1G31040,AT4G21960,AT5G17850,AT5G47990,AT1G69040,AT1G03790,AT4G11550,AT5G56030,AT2G41820,AT1G44170,AT1G07720,AT1G56660,AT5G60890,AT5G51670,AT4G38400,AT4G39210,AT3G27210,AT1G53080,AT1G34110,AT1G68330,AT1G55840,AT3G03840,AT5G47370,AT4G18280,AT5G52280,AT5G06760,AT5G25160,AT5G16600,AT1G01300,AT3G28740,AT2G01770,AT4G34870,AT1G26690,AT4G37400,AT1G18840,AT3G63350,AT5G19740,AT1G29670,AT1G26780,AT4G32070,AT3G55910,AT1G65010,AT3G55950,AT4G30660,AT3G28860,AT3G51430,AT3G57010,AT2G14890,AT3G22930,AT5G11950,AT3G55720,AT2G32240,AT4G31590,AT4G05590,AT3G60390,AT5G57240,AT5G65530,AT3G28850,AT4G09460,AT5G48500,AT4G10150,AT3G09710,AT4G15093,AT1G14360,AT4G27260,AT2G17630,AT3G29030,AT3G10410,AT3G07580,AT5G66420,AT2G47770,AT4G34200,AT4G40010,AT2G02850,AT5G48250,AT4G18640,AT3G05640,AT1G77280,AT3G47380,AT4G18030,AT2G28260,AT4G22780,AT1G63000,AT3G28340,AT1G64710,AT3G25220,AT5G47100,AT1G15210,AT2G28840,AT2G47500,AT1G69030,AT5G59530,AT2G36410,AT1G13300,AT2G30930,AT5G53590,AT5G07330,AT4G01610,AT1G59650,AT5G47960,AT4G27460,AT5G04470,AT5G40690,AT5G11000,AT2G23000,AT5G18470,AT3G10190,AT1G52720,AT5G19600,AT5G45460,AT1G01010,AT1G77500,AT2G44940,AT3G21230,AT5G11100,AT1G75390,AT5G27520,AT1G04560,AT5G57050,AT1G23800,AT3G52290,AT5G62580,AT5G23400,AT1G30760,AT5G06740,AT5G02540,AT5G59490,AT3G01930,AT4G38850,AT4G03070,AT1G56010,AT3G63470,AT2G27740,AT1G14370,AT5G25170,AT1G29510,AT1G77610,AT4G14380,AT1G17510,AT4G38860,AT4G37410,AT5G50720,AT4G30280,AT1G12070,AT2G42990,AT3G28345,AT4G36900,AT3G10910,AT5G15650,AT3G19400,AT3G02040,AT1G79530,AT3G27360,AT4G04830,AT2G22680,AT2G40110,AT2G41540,AT1G31710,AT1G48750,AT5G07920,AT4G36360,AT2G26760,AT2G38760,AT5G03670,AT1G01900,AT3G05910,AT2G45310,AT4G16500,AT4G27840,AT5G66310,AT2G22840,AT3G20340,AT3G12500,AT1G72200,AT5G63410,AT2G21200,AT4G39660,AT5G57700,AT2G39705,AT5G65310,AT1G01640,AT2G30860,AT3G26090,AT3G56800,AT1G08650,AT1G51060,AT2G23170,AT2G26330,AT1G50010,AT2G41830,AT2G38010,AT5G59090,AT3G17120,AT1G79110,AT1G70890,AT5G19110,AT3G53210,AT4G24510,AT5G55960,AT4G18510,AT2G47600,AT3G50660,AT1G30330,AT2G39050,AT4G29140,AT4G34230,AT4G21340,AT4G10270,AT3G14940,AT3G25900,AT5G44460,AT5G64180,AT3G09490,AT1G63940,AT5G07830,AT2G29490,AT1G17455,AT3G13980,AT5G65140,AT5G20110,AT4G14440,AT3G21240,AT3G06370,AT2G04650,AT5G48580,AT4G14270,AT1G02360,AT1G28470,AT5G43780,AT4G39390,AT5G08580,AT5G65300,AT4G33040,AT1G18280,AT2G22200,AT5G20790,AT5G39760,AT4G17615,AT5G37790,AT3G11590,AT1G01260,AT2G39700,AT3G12520,AT4G23820,AT5G54800,AT4G33700,AT1G06000,AT3G11580,AT2G19580,AT1G71830,AT5G37780,AT5G13080,AT1G22360,AT3G44320,AT1G05620,AT5G42890,AT2G40280,AT4G09890,AT1G79840,AT5G23310,AT3G49930,AT2G01610,AT2G16790,AT5G59350,AT4G02090,AT3G17810,AT1G22410,AT1G11190,AT1G22300,AT5G09300,AT1G74490,AT2G41180,AT1G30510,AT4G00910,AT1G69510,AT4G13710,AT5G63970,AT1G73300,AT5G12200,AT4G08770,AT5G16590,AT3G55840,AT2G01450,AT4G25640,AT3G23820,AT3G29250,AT3G04010,AT4G17215,AT5G05180,AT2G28080,AT5G23350,AT2G32920,AT2G43040,AT1G35720,AT5G51690,AT3G20510,AT3G58810,AT4G28050,AT3G47210,AT4G20480,AT4G17030,AT1G49720,AT1G16860,AT2G31900,AT1G43790,AT5G17330,AT2G28790,AT1G71960,AT5G13110,AT2G04500,AT5G23870,AT1G49740,AT2G29960,AT5G35700,AT5G44380,AT5G59290,AT1G07050,AT4G37220,AT3G02980,AT5G15180,AT2G34190,AT4G12730,AT3G03000,AT4G08520,AT5G67340,AT1G16490,AT5G48460,AT2G04780,AT3G16410,AT3G22240,AT1G75590,AT1G21880,AT3G46320,AT1G05720,AT1G50950,AT1G03870,AT5G49900,AT5G08610,AT4G21490,AT5G58690,AT4G34490,AT1G07750,AT5G43180,AT3G50260,AT3G16690,AT3G04910,AT5G61790,AT5G19875,AT3G13910,AT1G19710,AT2G18350,AT1G53885,AT3G02170,AT1G43020,AT5G04080,AT3G23800,AT1G32090,AT4G39940,AT1G15040,AT5G37740,AT4G22010,AT4G35500,AT2G45510,AT5G61000,AT3G63460,AT4G13310,AT3G27230,AT3G49120,AT1G49230,AT4G37240,AT1G18290,AT2G17720,AT1G51940,AT5G26260,AT3G09820,AT2G17990,AT3G01100,AT1G26650,AT1G49410,AT3G53990,AT2G37040,AT5G44030,AT2G35585,AT5G51570,AT4G17098,AT2G41760,AT3G48940,AT2G28960,AT3G60550,AT5G67520,AT1G10140,AT5G08260,AT5G60460,AT1G55690,AT1G04430,AT5G09810,AT5G48010,AT1G01110,AT1G47480,AT5G64860,AT1G20850,AT3G09470,AT5G56360,AT2G01170,AT2G45920,AT2G17290,AT1G33265,AT5G25770,AT1G67590,AT3G54200,AT5G64510,AT2G25220,AT3G13720,AT1G41830,AT5G64660,AT5G51890,AT2G26710,AT2G42800,AT1G17500,AT5G61380,AT4G28890,AT5G43330,AT2G32190,AT4G27970,AT5G01830,AT2G31390,AT5G62550,AT2G47160,AT1G72140,AT5G57970,AT1G44800,AT1G19370,AT4G09020,AT1G77920,AT3G12560,AT3G22570,AT2G24220,AT5G59845,AT5G49890,AT2G41220,AT4G20260,AT4G23510,AT1G21750,AT5G13820,AT2G22570,AT5G60450,AT3G14740,AT1G67300,AT2G22470,AT4G39090,AT1G13260,AT4G35410,AT3G23790,AT2G41340,AT4G15390,AT1G78660,AT3G52370,AT4G09030,AT5G01610,AT3G20130,AT1G01380,AT5G14230,AT1G01070,AT1G22910,AT3G23050,AT5G06930,AT2G20370,AT2G39130,AT4G05200,AT5G62490,AT1G77000,AT1G77130,AT5G26340,AT1G10200,AT2G19450,AT5G02420,AT1G79450,AT3G23810,AT5G20950,AT4G34650,AT3G21090,AT5G17420,AT2G28400,AT5G04770,AT4G12290,AT1G75540,AT5G15120,AT4G34990,AT5G09970,AT3G08860,AT5G47740,AT3G15500,AT2G43080,AT1G73040,AT4G37870,AT3G11410,AT3G22790,AT3G49350,AT1G54690,AT1G22740,AT2G32380,AT5G04860,AT2G04570,AT2G46740,AT3G09440,AT1G77460,AT1G33800,AT1G57620,AT1G30820,AT1G17745,AT3G02875,AT1G26850,AT1G28230,AT1G14920,AT3G15095,AT5G08130,AT5G02170,AT3G45700,AT1G08590,AT4G26760,AT5G25210,AT5G63140,AT1G54790,AT1G13210,AT3G19260,AT5G46430,AT2G21850,AT1G66410,AT1G51680,AT1G20010,AT3G09020,AT1G23470,AT5G60490,AT3G23030,AT4G39860,AT1G20900,AT1G71880,AT5G17490,AT5G57610,AT3G07420,AT1G64460,AT1G11210,AT5G65810,AT3G23660,AT1G54990,AT1G52540,AT5G06610,AT1G62760,AT2G39900,AT1G04610,AT1G25230,AT5G10600,AT5G62170,AT4G31240,AT1G53450,AT5G16730,AT2G47320,AT5G56350,AT4G29680,AT1G68620,AT5G64330,AT4G33980,AT1G71780,AT1G67560,AT5G59590,AT3G45010,AT4G19110,AT5G07000,AT4G30490,AT4G31910,AT1G30620,AT4G10955,AT3G56950,AT3G48780,AT3G28950,AT5G52510,AT1G69450,AT2G47630,AT1G36940,AT5G61560,AT4G13930,AT4G21620,AT5G19780,AT3G60520,AT5G64870,AT2G27230,AT2G21260,AT5G67210,AT1G65900,AT1G09460,AT3G22540,AT2G21020,AT2G15490,AT1G27950,AT5G60300,AT1G06550,AT5G10480,AT4G03190,AT5G35580,AT5G51350,AT3G18960,AT1G72180,AT4G23400,AT3G18280,AT5G50180,AT4G33420,AT2G41780,AT3G46030,AT3G49810,AT5G17160,AT1G24764,AT4G30080,AT5G48560,AT4G30350,AT2G39180,AT4G34050,AT5G62280,AT1G63840,AT1G07240,AT5G63530,AT5G39050,AT1G68690,AT1G20050,AT4G19860,AT5G57910,AT2G18170,AT5G10390,AT5G01700,AT3G26380,AT3G48490,AT3G18080,AT4G12080,AT1G08800,AT2G42840,AT1G70420,AT1G77700,AT3G22600,AT1G52080,AT2G19760,AT3G48350,AT2G46660,AT5G35370,AT1G02850,AT4G30500,AT3G54040,AT1G07690,AT1G27450,AT3G21550,AT1G70690,AT4G17350,AT1G02180,AT5G18270,AT5G15630,AT4G30020,AT2G36880,AT1G20620,AT3G14430,AT4G19380,AT4G19810,AT4G02500,AT3G08630,AT4G31100,AT2G38970,AT3G27580,AT4G23060,AT4G12590,AT5G57780,AT3G61610,AT5G23410,AT1G05340,AT2G40970,AT1G30040,AT3G22740,AT4G28410,AT1G72730,AT1G64650,AT3G11210,AT1G75710,AT1G12000,AT4G36970,AT2G44790,AT2G21830,AT1G79550,AT5G63880,AT1G20693,AT3G45780,AT1G21070,AT4G24960,AT2G05630,AT3G54960,AT3G53520,AT3G20670,AT2G16600,AT4G34960,AT1G76270,AT2G36320,AT1G68060,ATMG00080,AT1G62710,AT4G16540,AT3G46000,AT1G49560,ATMG00040,AT3G05290,AT2G44255,AT2G23030,AT3G54000,AT3G13060,AT4G29020,AT5G02410,AT2G04240,AT5G39730,AT5G61780,AT3G19580,AT4G14750,AT2G44010,AT2G18620,AT5G07680,AT1G63010,AT4G18360,AT3G46440,AT1G74660,AT2G39725,AT2G17120,AT1G48370,AT3G43960,AT2G37630,AT1G05210,AT3G09300,AT2G29130,AT3G07320,AT5G42420,AT1G72160,AT1G51760,AT3G59660,AT4G25900,AT5G51830,AT2G20515,AT5G02620,AT5G10840,AT5G49560,AT1G08320,AT5G02240,AT5G03460,AT1G08050,AT5G23420,AT3G04290,AT4G09740,AT5G06370,AT5G01500,AT5G46700,AT2G42960,AT3G15710,AT5G11740,AT5G20470,AT1G17550,AT1G78850,AT1G26270,AT5G45950,AT1G17060,AT1G10210,AT3G15650,AT3G17390,AT2G01530,AT2G37710,AT1G60610,AT3G55360,AT5G45210,AT5G65040,AT1G77690,AT3G06300,AT1G60660,AT1G22530,AT3G24500,AT3G06700,AT2G45790,AT1G67920,AT5G59020,AT2G33845,AT2G22430,AT4G35320,AT1G04750,AT2G46530,AT2G05380,AT5G23550,AT3G24503,AT1G19870,AT1G29450,AT2G21130,AT2G38800,AT2G28760,AT4G11010,AT3G56200,AT1G18470,AT5G11670,AT4G39270,AT3G62630,AT3G21770,AT1G60190,AT2G45430,AT5G21100,AT2G22170,AT2G30550,AT4G34890,AT5G65360,AT4G33985,AT4G17170,AT4G01430,AT4G36250,AT1G30690,AT3G14067,AT3G08720,AT1G53700,AT2G23620,AT5G62200,AT1G03900,AT3G59760,AT4G23440,AT3G11250,AT5G02860,AT3G03640,AT3G20250,AT1G14390,AT1G50630,AT2G47470,AT3G03870,AT3G51460,AT3G43270,AT1G70330,AT1G26640,AT5G51160,AT5G18900,AT4G36910,AT4G36180,AT3G29075,AT2G46920,AT3G13430,AT3G58710,AT5G59050,AT5G55550,AT1G08660,AT2G25310,AT4G36790,AT2G46620,AT3G50500,AT5G24290,AT1G05770,AT2G43020,AT5G04060,AT1G61160,AT5G26570,AT3G12920,AT4G20140,AT5G04950,AT4G24480,AT5G13490,AT5G16450,AT3G48510,AT1G23120,AT1G73760,AT1G17460,AT3G49720,AT4G33030,AT1G70500,AT5G13460,AT2G35020,AT1G15810,AT5G07080,AT1G69410,AT5G44720,AT1G42470,AT5G48370,AT3G16470,AT2G16630,AT1G22500,AT1G30900,AT5G04970,AT1G27770,AT1G34270,AT3G56000,AT2G27510,AT4G37050,AT2G24800,AT1G65960,AT1G51860,AT4G01950,AT4G11220,AT1G06350,AT1G07730,AT1G16300,AT1G23460,AT1G31885,AT1G48760,AT1G51780,AT1G59500,AT1G62610,AT1G62900,AT1G68050,AT1G78860,AT2G03020,AT2G03480,AT2G07671,AT2G10560,AT2G21250,AT2G23010,AT2G32210,AT2G33050,AT2G38940,AT2G44260,AT2G44890,AT2G45315,AT3G02230,AT3G02610,AT3G09800,AT3G16390,AT3G24300,AT3G45930,AT3G46640,AT3G48790,AT3G49110,AT3G55290,AT3G59690,AT4G01580,AT4G05110,AT4G07670,AT4G10160,AT4G10960,AT4G11310,AT4G12280,AT4G12520,AT4G13290,AT4G13890,AT4G17100,AT4G18100,AT4G21840,AT4G23560,AT4G34900,AT4G35160,AT4G37060,AT5G01330,AT5G10610,AT5G19770,AT5G20490,AT5G23360,AT5G33355,AT5G36180,AT5G42510,AT5G45470,AT5G46950,AT5G51680,ATMG00090,AT3G16400,AT5G42730,ATMG01080 HU_YHB-D/WT-D_DN Down-regulated 2-fold in YHB-D /WT-D (Table S1 PubmedID:19529817) AT1G09820,AT3G45900,AT5G08340,AT2G42280,AT1G62500,AT1G32690,AT4G15780,AT1G62050,AT4G00180,AT5G52190,AT1G15830,AT1G06690,AT1G12580,AT3G16280,AT5G28770,AT2G43550,AT4G01660,AT1G76990,AT5G58760,AT2G43010,AT4G05090,AT2G21280,AT2G38480,AT1G74040,AT3G54210,AT2G30070,AT4G35550,AT4G32260,AT4G08920,AT5G62630,AT3G47650,AT5G04620,AT4G24350,AT5G52110,AT4G15545,AT1G73920,AT4G40045,AT2G37920,AT3G15550,AT5G07280,AT5G06060,AT2G45770,AT5G64280,AT5G57030,AT5G58150,AT5G38850,AT1G04420,AT1G04660,AT1G22430,AT1G52670,AT3G06070,AT5G35100,AT5G57360,AT1G52550,AT3G18980,AT1G11860,AT1G74910,AT1G70090,AT1G79430,AT3G42570,AT4G27390,AT5G13510,AT4G35760,AT3G43540,AT1G19140,AT3G44880,AT3G04870,AT5G19530,AT3G15570,AT5G57550,ATCG01080,AT5G58570,AT3G55080,AT5G38290,AT5G23330,AT4G17540,AT5G02600,AT3G54690,AT4G38290,AT5G01510,AT4G33520,AT2G16280,AT3G04310,AT4G01690,AT1G80450,AT4G20960,AT4G34190,AT2G35450,AT3G23530,AT2G47460,AT1G11790,AT3G16910,AT5G56780,AT1G09130,AT4G12390,AT5G44520,AT5G04220,AT2G39560,AT1G01540,AT2G02950,AT3G17800,AT5G42780,AT4G31780,AT3G24120,AT4G04770,AT5G59770,AT5G13760,AT1G10740,AT1G20350,AT5G24150,AT5G48590,AT1G76520,AT4G23010,AT2G17972,AT5G28750,AT2G01890,AT1G53120,AT3G52720,AT5G52100,AT5G17290,AT3G46610,AT3G60370,AT1G07280,AT5G49970,AT1G55110,AT4G25580,AT1G03630,AT1G23550,AT5G22830,AT3G24430,AT2G29310,AT3G26170,AT1G07110,AT1G21350,AT4G39970,AT3G29230,AT1G67070,AT2G23690,AT5G09995,AT2G46210,AT4G08280,AT3G14690,AT5G10460,AT1G06680,AT5G27400,AT1G05840,ATCG00350,AT4G32570,AT1G10060,AT1G60230,AT2G35060,ATCG00280,AT5G63850,AT1G32070,AT3G09920,AT3G08010,AT5G12980,AT1G72360,AT5G55580,AT3G25480,AT1G59218,AT4G12790,AT1G08520,AT1G65950,AT5G54470,AT3G06483,AT4G26555,AT3G63410,AT5G65410,AT4G00480,AT3G62190,AT3G26740,AT2G21220,AT2G35490,AT4G11330,AT3G61770,AT4G35950,AT1G70310,AT5G38140,AT3G10840,AT3G62000,AT4G37300,AT4G37080,AT1G31650,AT1G80640,AT1G60550,AT5G49480,AT1G65260,AT4G13830,AT2G26340,AT2G21340,AT1G02910,AT2G30160,AT3G19010,AT1G64150,AT4G14540,AT5G04040,AT2G36990,AT1G20340,AT5G47560,AT1G77990,AT5G02030,AT1G80080,AT5G09230,AT1G25550,AT2G41100,AT1G16390,AT4G27600,AT5G18660,AT1G10920,AT1G11340,AT3G20680,AT5G11060,AT2G36885,AT1G21910,AT5G51020,AT5G62220,AT1G75210,AT1G73830,AT1G11720,AT4G14930,AT4G02260,AT4G34160,AT2G33180,AT3G22150,AT2G42190,AT2G31750,AT3G11110,AT4G37190,AT1G04530,AT1G30120,AT1G53800,AT3G62030,AT1G05385,AT2G03390,AT4G16480,AT4G11460,AT4G38970,AT2G45740,AT2G21385,AT5G46470,AT2G42490,AT1G20810,AT5G50530,AT4G09900,AT5G01410,AT2G26800,AT5G10160,AT4G31290,AT5G64290,AT5G15450,AT4G34830,AT2G23390,AT4G12980,AT2G24090,AT4G14870,AT1G68440,AT5G65840,AT2G27680,AT3G19450,AT2G06520,AT5G24810,AT1G15140,AT5G01240,AT1G19380,AT5G49820,AT1G24260,AT4G23990,AT5G64930,AT5G42810,AT5G14510,AT5G18930,AT5G61420,AT3G61470,AT3G03040,AT5G53920,AT3G43600,AT3G13740,AT5G52960,AT5G28840,AT4G37470,AT2G26500,AT4G18220,AT5G45310,AT4G10300,AT4G25700,AT1G35350,AT1G19715,AT5G35630,AT1G68080,AT5G01920,AT4G34630,AT1G03440,AT1G80850,AT1G53920,AT2G25680,AT1G32550,AT3G49470,AT5G49230,AT3G55980,AT2G25840,AT1G18620,AT2G46220,AT3G16250,AT4G08850,AT5G17630,AT1G13080,AT5G62790,AT3G01860,AT3G52072,AT3G47490,AT1G19620,AT2G36000,AT4G01250,AT4G34740,AT3G01210,AT2G46250,AT1G72910,AT3G10970,AT2G34630,AT4G03150,AT3G03020,AT5G51545,AT4G16950,AT3G10230,AT3G47560,AT1G15260,AT2G30390,AT4G32800,AT4G29590,AT1G11850,AT1G22885,AT4G01800,AT2G20920,AT3G01680,AT1G61520,AT4G15690,AT3G50060,AT4G24020,AT4G24140,AT1G27120,AT1G32500,AT3G49360,AT5G01530,AT1G58807,AT4G37460,AT5G18430,AT1G54730,AT5G67260,AT5G53900,AT5G14565,AT5G66520,AT4G15490,AT2G35840,AT2G34450,AT2G37540,AT3G27540,AT1G26600,AT3G20300,AT4G21180,AT1G70000,AT2G35390,AT5G15780,AT5G12860,AT2G36590,AT1G05020,AT1G10650,AT2G33255,AT5G48170,AT3G46630,AT3G53270,AT1G56500,AT4G28030,AT2G40150,AT1G27730,AT1G32470,AT5G05440,AT5G09650,AT5G06290,AT5G58870,AT1G32540,AT1G22570,AT4G31805,AT1G76730,AT1G55930,AT1G62400,AT5G15240,AT4G26700,AT4G13510,AT2G13360,AT1G13380,AT1G29910,AT5G17660,AT1G14280,AT2G04700,AT4G02770,AT2G29670,AT3G54660,AT5G15410,AT1G54520,AT1G22650,AT4G39540,AT2G36800,AT1G23205,AT4G37000,AT1G21460,AT5G60880,AT2G48070,AT5G06710,AT4G18370,AT3G12685,AT4G33630,AT4G20070,AT3G11620,AT2G30170,AT3G06570,AT3G15520,AT4G31530,AT1G69935,AT4G19830,AT1G75410,AT3G62930,AT3G47860,AT4G27410,AT1G03600,AT1G24400,AT5G19260,AT5G46050,AT4G14890,AT2G16070,AT3G52360,AT2G39450,AT5G15310,AT5G61410,AT3G06510,AT1G27385,AT4G28740,AT4G39510,AT1G31170,AT4G15420,AT3G50685,AT4G34240,AT4G17070,ATCG00130,AT5G63380,AT1G16080,AT5G65380,AT3G44380,AT1G66430,AT3G48560,AT1G31190,AT1G70660,AT4G04640,AT5G48540,AT4G16370,AT5G52050,AT3G12780,AT1G48650,AT1G71810,AT5G43870,AT1G64680,AT4G35090,AT4G34350,AT1G72030,AT5G52970,AT1G19450,AT1G72430,AT4G18480,AT5G17350,AT3G15110,AT5G01730,AT2G40880,AT5G03650,AT2G40330,AT5G59030,AT2G32010,AT1G68590,AT2G17880,AT2G43820,AT4G16155,AT3G58140,AT4G24050,AT1G21065,AT1G54350,AT1G12240,AT2G01110,AT2G40860,AT1G70250,AT1G56150,AT5G27560,AT2G38330,AT3G56140,AT2G32880,AT3G09050,AT5G57960,AT2G26740,AT2G43530,AT4G37550,AT1G21400,AT4G33500,AT5G38150,AT4G39710,AT1G50450,AT1G67700,AT1G05470,AT1G66160,AT1G32160,AT1G75730,AT1G31330,AT2G01850,AT5G45170,AT2G45990,AT5G45060,AT3G22750,AT1G65240,AT4G25650,AT5G54130,AT2G03310,AT1G18680,AT5G54170,AT4G19985,AT5G24760,ATCG00430,AT2G34860,AT1G48030,AT5G14260,AT4G08930,AT1G35340,AT1G30260,AT1G24340,AT3G06780,AT2G47910,AT3G17930,AT4G26860,AT2G36835,AT5G18140,AT1G64530,AT2G23760,AT5G62840,AT5G46390,AT4G03280,AT5G44530,AT5G36160,AT5G66570,AT5G56100,AT5G14070,AT5G19580,AT4G15660,AT2G01760,AT2G35155,AT3G29290,AT3G22104,AT2G41040,AT3G24140,AT4G26520,AT5G13650,AT2G44230,AT3G21890,AT1G21130,AT2G42690,AT3G57770,AT4G23210,AT1G03680,AT5G25630,AT5G42310,AT2G39190,AT1G71030,AT5G42270,AT4G17250,AT3G19030,AT3G15060,AT3G62550,AT1G49975,AT5G02840,AT4G30610,AT1G64430,AT1G75880,AT5G57350,AT1G49840,AT2G37450,AT2G39730,AT1G22400,AT5G52250,AT5G47840,AT1G19150,AT5G24520,AT4G28290,AT3G53900,AT3G16120,AT3G26085,AT1G68520,AT5G55180,AT3G62470,AT4G02390,AT1G15820,AT2G20875,AT4G13220,AT5G18600,ATCG01110,AT1G12800,AT4G12800,AT4G28706,AT3G11945,AT4G25470,AT1G28600,AT4G14910,AT3G26630,AT3G10420,AT4G22200,AT5G39660,AT1G15180,AT1G01790,AT3G51510,AT3G14415,AT5G17310,AT1G68660,AT4G23570,AT2G35660,AT1G50730,AT5G58140,AT3G13040,AT1G52340,AT2G17220,AT1G06240,AT1G33080,AT3G17510,AT3G46900,AT3G19170,AT1G54500,AT1G28140,AT1G63750,AT5G11840,AT3G53960,AT1G17220,AT1G62750,AT5G19970,ATCG00420,AT2G30540,AT3G44020,AT5G43260,AT5G40500,AT2G24860,AT3G49260,AT3G03260,AT3G26710,AT4G37270,AT5G02830,AT5G40170,AT3G08730,AT5G14970,AT5G10140,AT1G18460,AT4G10030,AT3G25805,AT5G38660,AT5G54180,AT2G19800,AT1G21640,AT1G37130,AT4G27710,AT1G23400,AT1G13670,AT5G23120,AT5G56750,AT1G70870,AT2G45850,AT5G24460,AT1G78020,AT1G50320,AT1G73630,AT3G61080,AT2G36145,AT3G16140,AT3G62820,AT1G79360,AT4G02200,AT5G58260,AT2G46820,AT1G31920,AT1G78290,AT2G38310,AT3G61310,AT5G51110,AT2G47940,AT4G24670,AT2G20260,AT5G19240,AT2G01290,AT5G39580,AT5G49160,AT2G30600,AT2G45190,AT1G30380,AT5G64240,AT4G10040,AT2G32640,AT1G12860,AT1G80030,AT1G64770,AT4G11175,ATCG00270,AT1G61810,AT4G18570,AT1G34245,AT2G18290,AT1G30530,AT2G28605,AT3G56010,AT1G54780,AT5G53210,AT2G29300,AT2G42750,AT5G54270,AT5G45930,AT4G28080,AT5G11070,AT1G61190,AT5G52420,AT3G04760,AT1G22850,AT3G09580,AT4G19170,AT5G44510,AT3G22210,AT5G46800,AT4G02530,AT1G68840,AT2G25735,AT3G18750,AT4G21280,AT3G16520,AT5G43750,AT1G78200,AT2G44920,AT4G24930,AT3G27170,AT1G05200,AT5G13410,ATCG00680,AT3G47295,AT3G14760,ATCG00690,AT3G25690,AT1G65190,ATCG00020,AT1G16510,AT2G24600,AT1G75490,AT5G64460,AT1G50040,AT5G26820,AT3G23700,AT1G62250,AT1G12370,AT4G38960,AT2G21080,AT3G01670,AT4G16410,AT3G51420,AT5G15910,AT2G43140,AT1G44920,AT4G28750,AT3G11170,AT2G17340,AT3G02870,AT3G26080,AT4G13550,AT2G33815,AT4G33470,AT2G28305,AT4G25080,AT1G63970,AT2G30570,AT1G43670,AT4G08870,AT5G05200,AT3G16000,AT5G40060,AT2G25080,AT2G32480,AT1G08550,AT5G64170,AT5G38520,AT5G04230,AT1G71890,AT3G13062,AT5G53500,AT3G56940,AT2G21960,AT2G47890,AT1G73110,AT1G64720,AT1G62030,AT1G67840,AT5G18670,AT5G15600,AT5G66190,AT1G02475,AT4G34090,AT1G67740,AT5G60970,AT4G25450,AT4G37930,AT5G35790,AT1G68110,AT1G06460,AT1G10370,AT3G07870,AT2G04790,AT1G67400,AT2G24540,AT5G45680,AT5G10310,AT1G48100,AT3G60290,AT3G19000,AT4G09010,AT1G42970,AT4G15700,AT3G48720,AT5G24800,AT5G24300,AT3G14770,AT1G07390,AT3G27110,AT5G09660,AT3G55800,AT1G24530,AT3G04790,AT1G13930,AT3G02910,AT1G23390,AT2G35290,AT2G23670,AT5G08740,AT3G49160,AT2G43710,AT5G20220,AT1G18730,AT1G43560,AT3G19720,AT5G02180,AT1G18020,AT5G55380,AT5G22620,AT3G56650,AT3G60690,AT1G78580,AT3G11090,AT3G57040,AT3G61250,AT3G05180,AT3G58690,AT2G41680,AT5G19220,AT2G39250,AT2G18790,AT5G27360,AT1G32200,AT2G38780,AT5G58330,AT4G28025,AT5G13720,AT5G08410,AT4G08040,AT1G69160,AT5G47650,AT1G77090,AT1G71500,AT1G52220,AT4G38840,AT2G27290,AT1G22590,AT1G77490,AT4G29070,AT2G23600,AT3G24190,AT2G05160,AT1G61380,AT3G07700,AT2G46735,AT5G24850,AT2G31790,AT2G16500,AT1G53090,AT1G79790,AT1G08380,AT1G35420,AT3G57030,AT3G07040,AT1G04110,AT2G04795,AT4G15510,AT2G26550,AT1G51400,AT2G48020,AT5G25120,AT5G46780,AT2G21185,AT4G01050,AT5G46110,AT5G57040,AT4G21210,AT2G47450,AT1G02620,AT5G07020,AT4G28660,AT5G53490,AT2G43620,AT4G17810,AT1G53670,AT5G38510,AT2G33590,AT3G50750,AT1G19730,AT1G49750,AT3G23400,AT1G66840,AT2G30950,AT3G14930,AT5G02160,AT5G04490,AT1G34310,AT3G02690,AT2G41290,AT5G61670,AT1G26218,AT4G02420,AT4G36220,AT4G00750,AT2G47490,AT4G22753,AT5G19940,AT5G28030,AT3G55330,AT3G15830,AT3G52740,AT4G23890,AT5G16240,AT2G01590,AT1G70760,AT1G74640,AT4G32190,AT1G02820,AT5G53970,AT1G29530,AT2G46910,AT2G21210,AT3G17470,AT5G64850,AT5G06980,AT5G42070,AT1G74960,AT3G15360,AT1G78140,AT1G13700,AT1G32380,AT2G26580,AT4G11570,AT3G50270,AT5G08050,AT4G34730,AT3G48200,AT5G17170,AT5G13630,AT5G08650,AT1G49010,AT5G14470,AT3G47470,AT1G06040,AT5G64040,AT1G22630,AT1G52230,AT1G79770,AT1G05680,AT5G51010,AT4G33010,AT4G16980,AT3G54900,AT3G16175,AT1G53520,AT1G30520,AT3G53720,AT5G48790,AT5G59400,AT1G55370,AT3G06080,AT1G55910,AT5G01015,AT4G36530,AT1G70700,AT1G06650,AT3G50790,AT5G06870,AT1G74070,AT1G22750,AT1G52590,AT1G29660,AT3G01480,AT3G21390,AT1G76450,AT2G41990,AT5G10470,AT5G20140,AT4G17360,AT3G21760,AT5G14760,AT3G21055,AT3G46490,AT1G58340,AT1G57770,AT1G71040,AT1G19740,AT2G31070,AT1G27480,AT3G59080,AT2G36690,AT3G61890,AT2G35260,AT5G63060,AT3G28270,AT2G05620,AT5G40380,AT4G28190,AT1G72610,AT3G10050,AT1G31800,AT4G37200,AT5G46270,AT3G53470,AT3G01500,AT1G23740,AT2G29320,AT1G32780,AT4G37610,AT4G27820,AT1G42550,AT1G32440,AT1G78995,AT1G45474,AT4G12320,AT2G34060,AT3G61210,AT5G48300,AT2G29340,AT2G22540,AT5G59730,AT1G66980,AT4G27300,AT1G68010,AT1G18330,AT3G55040,AT1G03620,AT1G50020,AT3G25820,AT2G01860,AT5G50100,AT4G33000,AT2G21320,AT3G61870,AT4G22710,AT4G09650,AT1G79600,AT3G63140,AT5G04140,AT3G50560,AT1G64780,AT1G77930,AT2G42220,AT1G34000,AT1G23310,AT1G64860,AT1G03130,AT5G17230,AT1G54820,AT5G16810,AT1G62510,AT4G22570,AT5G44190,AT1G07700,AT1G03400,AT1G62960,AT4G25050,AT1G09340,AT1G71480,AT5G36790,AT3G53920,AT4G13840,AT5G19500,AT5G54300,AT2G21330,AT3G47070,AT2G20250,AT3G15840,AT2G39470,AT5G65890,AT3G56160,AT1G65390,AT1G15290,AT2G40400,AT1G50250,AT4G33660,AT5G40610,AT1G35290,AT2G43560,AT5G51460,AT1G05690,AT2G46070,AT4G27520,AT2G38460,AT1G76570,AT3G54050,AT1G12250,AT1G05010,AT1G14150,AT3G27050,AT2G41250,AT4G00950,AT3G17040,AT1G12900,AT4G13010,AT5G56850,AT4G27700,AT1G69523,AT4G30993,AT1G14345,AT5G19855,AT5G38990,AT4G21870,AT3G10280,AT4G05180,AT1G79510,AT4G13500,AT3G14210,AT5G59920,AT4G18810,AT3G55970,AT5G02120,AT2G26080,AT5G47610,AT3G11900,AT1G20020,AT2G40020,AT3G27925,AT5G16400,AT1G78510,AT3G46780,AT5G24210,AT1G54040,AT5G50700,AT2G34430,AT2G23420,AT3G26570,AT1G74730,AT5G35170,AT4G02920,AT3G55710,AT4G33666,AT1G55480,AT1G04800,AT1G75690,AT4G09350,AT4G12830,AT2G24820,AT2G42770,AT2G25200,AT2G37030,AT1G22890,AT1G06430,AT4G18010,AT4G15680,AT4G17245,AT1G66330,AT3G25760,AT2G43520,AT3G08940,AT5G64940,AT5G54770,AT4G34610,AT3G62410,AT2G32500,AT5G06530,AT5G16540,AT1G52510,AT2G37970,AT3G02020,AT1G75460,AT2G34510,AT1G70820,AT1G10360,AT5G44870,AT5G64840,AT2G37240,AT4G25910,AT3G02730,AT5G17050,AT1G08630,AT3G62150,AT5G25840,AT2G35960,AT3G59060,AT1G63360,AT5G58770,AT1G52870,AT2G33250,AT1G15980,AT1G66130,AT1G33600,AT2G29090,AT1G76100,AT5G57345,AT4G35250,AT3G21670,AT3G21870,AT3G18890,AT3G10060,AT1G17050,AT4G37980,AT5G41050,AT3G02830,AT3G23410,AT4G14480,AT2G46340,AT1G73650,AT5G46450,AT3G02150,AT3G15620,AT5G17670,AT3G19800,AT1G68570,AT3G47500,AT4G12470,AT1G78460,AT1G03055,AT5G13770,AT3G48700,AT4G22890,AT1G07010,AT3G47430,AT4G15430,AT5G44580,AT5G03555,AT5G59250,AT3G54890,AT5G59750,AT5G67030,AT4G12480,AT1G32220,AT5G15850,AT5G52570,AT1G44000,AT4G16990,AT3G59400,AT1G21540,AT1G70610,AT4G04850,AT3G22420,AT5G55450,AT4G17840,AT4G32590,AT2G46450,AT3G47250,AT1G59740,AT3G50820,AT3G16220,AT4G23290,AT2G32540,AT1G70580,AT3G12320,AT2G38230,AT5G23730,AT4G16690,AT1G33811,AT2G36630,AT4G38420,AT4G18650,AT4G23300,AT5G16030,AT5G16010,AT3G20270,AT1G44446,AT1G58290,AT2G41120,AT3G22640,AT2G13610,AT4G37760,AT2G03750,AT5G37360,AT1G65230,AT1G32520,AT5G01740,AT3G15850,AT2G23130,AT5G62430,AT2G23840,AT1G78450,AT1G18060,AT5G23060,AT3G09600,AT1G32900,AT2G04039,AT2G34460,AT1G54740,AT4G32770,AT1G51805,AT2G32860,AT5G55620,AT4G00050,AT5G19850,AT1G21500,AT1G73870,AT1G64900,AT2G29650,AT4G37150,AT5G27290,AT2G29290,AT3G62950,AT1G59700,AT4G04330,AT5G65010,AT4G19530,AT2G15020,AT1G51110,AT1G16720,AT5G17300,AT3G05730,AT3G54500,AT1G56510,AT2G04040,AT3G48420,AT4G25100,AT4G37560,AT1G68830,AT3G19480,AT4G24040,AT1G55960,AT2G05070,AT3G01060,AT4G37310,AT1G64500,AT5G35970,AT3G19850,AT1G75100,AT1G18810,AT1G04350,AT4G28780,AT3G56290,AT2G19650,AT5G07240,AT1G29700,AT5G57560,AT1G76080,AT2G34620,AT1G60590,AT4G24700,AT1G76110,AT5G24160,AT4G18740,AT3G17609,AT2G32100,AT5G38980,AT4G04840,AT3G44970,AT4G26530,AT1G33110,AT2G30520,AT5G49740,AT5G22390,AT5G24420,AT5G51720,AT3G22060,AT5G24120,AT2G29360,AT3G28220,AT5G42760,AT1G66970,AT5G48485,AT1G01060,AT5G20230,AT4G26150,AT3G27690,AT5G43450,AT3G01550,AT3G61220,AT4G37800,AT5G67370,AT5G36910,AT1G22690,AT1G35140,AT2G46830,AT4G27030,AT5G45820,AT1G07180,AT4G17090,AT3G02380,AT2G31380,AT5G65730,AT1G65490,AT3G57020,AT5G48490,AT1G17990,AT1G26220,AT1G29920,AT1G58848,AT1G59124,AT1G61180,AT1G62630,AT1G65250,AT1G72930,AT2G05100,AT2G05310,AT2G21187,AT2G23590,AT2G24545,AT2G26750,AT2G29720,AT2G32530,AT2G32870,AT2G33810,AT2G34420,AT2G36792,AT2G38210,AT2G40710,AT2G46720,AT3G14420,AT3G15820,AT3G17070,AT3G21755,AT3G23510,AT3G25770,AT3G25830,AT3G26070,AT3G26180,AT3G43400,AT3G52070,AT3G62540,AT4G01350,AT4G08900,AT4G12310,AT4G13505,AT4G16400,AT4G18210,AT4G22690,AT5G05580,AT5G14060,AT5G14350,AT5G14570,AT5G28450,AT5G34780,AT5G36700,AT5G39000,AT5G49730,AT5G50600,AT5G50640,AT1G29930,AT1G61300,AT2G36790,AT4G37680,AT5G14820,AT1G61310 HU_WT-RC15/WT-D_UP Up-regulated 2-fold in WT-Rc15/WT-D (Table S1 PubmedID:19529817) AT5G51210,AT4G22460,AT3G12820,AT4G13790,AT4G14690,AT5G53660,AT4G10240,AT1G02340,AT5G01320,AT2G34020,AT4G22490,AT5G47450,AT5G02580,AT5G60660,AT1G72290,AT4G12550,AT5G19100,AT5G63650,AT5G65800,AT2G21910,AT5G66590,AT5G22500,AT3G05950,AT1G02800,AT2G33380,AT3G59930,AT2G28780,AT5G57670,AT4G35720,AT4G12510,AT1G80160,AT5G38710,AT1G49570,AT4G11610,AT4G14465,AT2G34700,AT4G36010,AT1G52830,AT3G01260,AT1G70270,AT4G14130,AT5G44610,AT5G53190,AT3G22840,AT2G43060,AT4G16670,AT4G11190,AT4G36110,AT1G02205,AT4G16780,AT2G43050,AT1G75780,AT4G37010,AT4G39675,AT4G21830,AT2G37670,AT1G75450,AT3G15540,AT4G01140,AT4G08300,AT1G01600,AT1G19530,AT4G13210,AT3G54510,AT1G62280,AT2G34315,AT5G42860,AT5G53250,AT1G15550,AT2G43535,AT3G05150,AT1G63380,AT4G26320,AT1G64660,AT3G26460,AT2G14210,AT5G43520,AT4G37220,AT3G59010,AT3G51410,AT3G48460,AT4G18510,AT1G33170,AT3G51895,AT5G24910,AT4G11290,AT2G38400,AT2G18010,AT2G21640,AT4G20110,AT3G54770,AT1G18970,AT5G28080,AT5G42500,AT1G10550,AT3G19390,AT2G41070,AT4G29270,AT5G18060,AT5G12940,AT5G07010,AT5G02540,AT3G60140,AT1G64110,AT5G15720,AT4G02290,AT5G57760,AT1G63140,AT3G05890,AT2G46750,AT4G38400,AT1G30760,AT5G10580,AT3G54950,AT3G59900,AT4G25420,AT4G26390,AT5G02260,AT1G05490,AT1G70710,AT4G25260,AT4G10020,AT2G34500,AT2G28085,AT3G23090,AT1G64640,AT1G29460,AT1G77330,AT1G75900,AT4G32280,AT2G01770,AT5G50915,AT4G15400,AT5G43180,AT4G16000,AT5G59520,AT3G05920,AT2G31945,AT5G25160,AT1G17430,AT1G61800,AT1G15380,AT5G48430,AT3G03240,AT5G67520,AT4G32460,AT4G21850,AT2G29440,AT2G47270,AT5G54190,AT2G25160,AT4G30060,AT2G35820,AT2G46990,AT3G61930,AT1G16850,AT1G01780,AT1G65920,AT2G21880,AT3G24290,AT1G08500,AT4G23870,AT4G38860,AT2G45210,AT5G15120,AT3G02850,AT5G02200,AT2G37280,AT3G02040,AT5G59930,AT1G08310,AT1G53080,AT1G02400,AT3G02550,AT1G32450,AT3G29370,AT5G60760,AT1G20160,AT1G01390,AT1G10480,AT2G32430,AT5G06200,AT3G02620,AT5G06570,AT1G64390,AT4G19420,AT2G32990,AT5G56540,AT3G53200,AT5G20240,AT3G17790,AT3G16150,AT2G24300,AT4G29690,ATCG00790,AT2G21020,AT4G30290,AT3G50890,AT2G06200,AT2G47000,AT1G52250,AT5G15290,AT2G47780,AT1G45130,AT1G19510,AT4G00910,AT2G35760,AT4G37070,AT4G30420,AT5G59010,AT5G59530,AT3G45970,AT5G23750,AT1G18280,AT2G22860,AT3G25730,AT3G25290,AT4G17340,AT1G77200,AT2G17710,AT1G23060,AT1G29195,AT3G11550,AT5G15150,AT1G30080,AT4G39070,AT1G50560,AT3G55310,AT4G32870,AT4G29140,AT1G17810,AT1G56660,AT1G07090,AT4G23030,AT1G61590,AT4G15330,AT1G27030,AT3G01220,AT3G55890,AT2G19660,AT3G59695,AT1G17190,AT1G44830,AT1G32170,AT5G09440,AT4G17030,AT1G73300,AT1G76240,AT1G21980,AT1G04240,AT5G66080,AT5G15830,AT5G48900,AT4G13580,AT3G55910,AT4G19120,AT4G30410,AT5G24580,AT1G77500,AT1G62760,AT1G31070,AT5G65300,AT1G28230,AT1G05260,AT1G63220,AT5G47370,AT1G44800,AT4G14010,AT1G73640,AT5G63820,AT3G14370,AT4G37740,AT1G42470,AT3G16690,AT2G14900,AT3G28180,AT2G21540,AT1G04250,AT4G11550,AT1G01640,AT3G24720,AT4G10250,AT5G19110,AT2G27370,AT4G23700,AT5G07030,AT4G25640,AT3G50260,AT1G23140,AT5G66170,AT3G60070,AT2G38500,ATCG00780,AT4G37050,AT1G56010,AT1G29050,AT4G38230,AT4G16515,AT3G42800,AT4G34770,AT1G72070,AT5G23350,AT2G20750,AT3G23800,AT5G25770,AT5G42180,AT1G67910,AT3G44990,AT3G15500,AT4G40070,AT1G23120,AT5G53980,AT4G25280,AT2G26560,AT1G29510,AT4G12880,AT5G47240,AT1G20900,AT5G10430,AT2G37750,AT4G35190,AT1G10140,AT3G29575,AT1G09090,AT5G15580,AT4G28410,AT3G16490,AT4G37580,AT2G44010,AT3G09220,AT1G20070,AT1G11545,AT4G30670,AT1G15040,AT4G30140,AT3G63470,AT4G24180,AT3G47210,AT5G65040,AT5G46240,AT5G59780,AT2G41340,AT2G28960,AT2G17500,AT5G63600,AT3G61830,AT5G22740,AT1G23760,AT5G66650,AT1G34110,AT5G17700,AT4G27460,AT2G35210,AT2G46780,AT1G72200,AT4G12080,AT4G27970,AT5G06740,AT5G57480,AT2G04500,AT1G62480,AT5G58660,AT5G01790,AT1G26780,AT4G05200,AT5G62280,AT3G03840,AT3G30180,AT5G40730,AT2G45050,AT1G23800,AT4G16500,AT3G49860,AT1G01200,AT1G06080,AT1G17960,AT2G39980,AT4G32070,AT4G39660,AT2G32240,AT3G13610,AT4G13310,AT2G42010,AT5G66210,AT2G45920,AT2G38800,AT3G29180,AT5G66700,AT1G17060,AT1G03850,AT4G18610,AT5G19600,AT3G28340,AT1G09460,AT3G48520,AT5G11540,AT1G01010,AT4G38580,AT5G63590,AT5G51060,AT4G23885,AT3G14280,AT4G11320,AT4G38850,AT1G69526,AT3G06850,AT1G20190,AT5G14230,AT5G63810,AT1G11000,AT1G29500,AT4G01390,AT1G51860,AT5G46040,AT1G74490,AT5G65140,AT3G23430,AT1G06980,AT5G59260,AT2G34150,AT1G13260,AT4G20260,AT2G36830,AT5G24030,AT2G22560,AT1G76180,AT2G28110,AT1G13300,AT1G44970,AT4G36930,AT5G07110,AT4G11050,AT1G31040,AT1G07740,AT2G42990,AT2G39430,AT1G19020,AT2G22970,AT5G53710,AT5G17910,AT1G70990,AT3G48940,AT1G61160,AT1G63840,AT4G28890,AT2G37130,AT1G71740,AT1G08650,AT1G61740,AT1G04040,AT5G01830,AT4G28650,AT1G44170,AT2G44910,AT4G17220,AT1G32640,AT5G55170,AT3G12610,AT2G26710,AT5G61660,AT4G13030,AT1G69570,AT1G53830,AT4G21340,AT1G47480,AT3G08040,AT3G10910,AT5G41900,AT1G76090,AT1G22500,AT2G36320,AT5G44460,AT5G45210,AT1G06360,AT4G05170,AT4G35060,AT3G50900,AT5G67390,AT3G48550,AT1G80570,AT1G01470,AT4G34600,AT1G12080,AT5G59590,AT2G02820,AT4G17350,AT4G17695,AT3G62040,AT4G27450,AT2G31900,AT5G49900,AT1G15050,AT5G47960,AT1G02360,AT1G19300,AT1G60060,AT1G52200,AT1G70560,AT1G74010,AT2G33060,AT2G40110,AT4G01950,AT3G17420,AT2G47160,AT1G30640,AT5G66390,AT3G63350,AT1G78570,AT1G28330,AT2G45290,AT1G67750,AT5G45280,AT1G18400,AT2G25090,AT5G35740,AT4G37890,AT1G30720,AT5G50200,AT5G16590,AT4G34760,AT3G61060,AT2G30210,AT2G45510,AT2G01150,AT5G61900,AT3G48020,AT2G35270,AT2G34300,AT4G22780,AT3G58810,AT1G64330,AT3G11580,AT1G29430,AT5G11260,AT3G55840,AT2G42570,AT1G72470,AT1G27380,AT3G20250,AT3G21090,AT2G01900,AT1G69040,AT4G16442,AT4G36380,AT1G22740,AT5G64572,AT5G43350,AT4G36790,AT2G44450,AT1G62990,AT1G69690,AT1G29980,AT3G24450,AT5G01610,AT4G23450,AT3G45300,AT4G33150,AT1G01120,AT3G20340,AT2G36100,AT5G17850,AT3G18200,AT4G27260,AT5G62480,AT5G39320,AT1G08320,AT4G40010,AT2G40000,AT4G10150,AT4G23690,AT1G64480,AT3G11750,AT2G21620,AT3G13700,AT5G52280,AT3G05900,AT5G61250,AT3G51440,AT4G37390,AT1G26960,AT5G59050,AT5G04770,AT3G08720,AT4G30490,AT5G03570,AT4G21600,AT5G13820,AT3G22740,AT5G39860,AT5G65530,AT3G20830,AT1G34630,AT2G28670,AT5G19740,AT2G36410,AT2G25450,AT5G44380,AT1G27670,AT3G63440,AT3G60450,AT1G01380,AT2G44380,AT5G25110,AT2G32280,AT1G79840,AT1G31850,AT1G18270,AT5G47740,AT5G61560,AT1G79450,AT1G04610,AT1G31060,AT1G67920,AT1G04680,AT4G18280,AT1G56145,AT3G16500,AT1G29440,AT1G02810,AT1G66350,AT3G50280,AT1G11960,AT5G49890,AT2G37180,AT5G05460,AT5G07920,AT1G62770,AT5G65790,AT1G31050,AT4G17800,AT4G29700,AT2G35880,AT2G22080,AT1G48260,AT5G64300,AT5G13080,AT1G08590,AT3G09490,AT3G22930,AT5G52120,AT3G23030,AT5G35580,AT4G00700,AT1G62660,AT2G32580,AT4G08950,AT4G15093,AT3G14560,AT4G01430,AT5G49710,AT2G24220,AT1G63440,AT1G46768,AT4G37240,AT3G50660,AT4G31240,AT4G37770,AT3G58710,AT4G35560,AT2G44790,AT3G19580,AT4G39840,AT2G17840,AT5G04470,AT1G33055,AT1G71697,AT1G06850,AT4G00820,AT2G04800,AT3G10340,AT1G74650,AT4G22590,AT3G09020,AT4G04830,AT5G13870,AT2G24170,AT5G11950,AT4G10955,AT2G17290,AT1G47610,AT4G33420,AT5G10695,AT2G30360,AT3G13910,AT4G25390,AT1G76590,AT3G56200,AT5G50720,AT3G62090,AT1G17620,AT1G30750,AT4G25810,AT3G14050,AT1G35260,AT1G35580,AT4G30400,AT3G16180,AT1G16490,AT1G69600,AT3G49220,AT1G09390,AT2G04080,AT3G55470,AT1G22180,AT3G06035,AT5G53590,AT4G02700,AT4G25090,AT2G47860,AT2G47600,AT5G58700,AT5G04860,AT5G45670,AT5G53410,AT5G20470,AT1G07240,AT1G18910,AT3G54040,AT3G28950,AT3G46130,AT3G26440,AT2G38790,AT4G36360,AT1G67590,AT1G21920,AT2G37940,AT5G40780,AT1G74760,AT4G31450,AT2G33570,AT3G61490,AT1G70690,AT3G07990,AT5G49800,AT1G06350,AT1G07730,AT1G30730,AT1G31885,AT1G59500,AT1G62610,AT1G62900,AT2G04066,AT2G10560,AT2G33050,AT2G37170,AT2G44890,AT3G02610,AT3G13710,AT3G24300,AT3G55290,AT3G59690,AT3G63445,AT4G07670,AT4G10160,AT4G10960,AT4G11310,AT4G12520,AT4G13290,AT4G21840,AT4G37060,AT5G01330,AT5G20490,AT5G23360,AT5G27780,AT5G33355,AT5G36180,AT5G42510,AT5G43370,AT5G64570 HU_WT-RC15/WT-D_DN Down-regulated 2-fold in WT-Rc15/WT-D (Table S1 PubmedID:19529817) AT1G21065,AT1G51580,AT5G51545,AT1G10370,AT1G03600,AT4G17360,AT1G14580,AT1G79600,AT4G38460,AT3G56010,AT4G17070,AT4G31050,AT3G10520,AT2G47940,AT4G23210,AT1G17050,AT4G37080,AT4G34590,AT5G45680,AT3G22120,AT5G45930,AT5G40150,AT1G31800,AT4G00480,AT2G36800,AT1G23130,AT1G78370,AT2G27290,AT2G39250,AT5G54960,AT1G22650,AT1G24020,AT3G10570,AT1G74640,AT1G68570,AT4G27710,AT2G43710,AT5G38510,AT5G04000,AT1G70310,AT3G15680,AT3G05180,AT2G23180,AT2G37380,AT3G22420,AT5G38520,AT1G27385,AT4G23680,AT5G35630,AT1G44920,AT1G77090,AT2G32500,AT2G33255,AT1G18370,AT1G35420,AT1G79040,AT5G13140,AT1G78140,AT2G37540,AT4G34160,AT1G55670,AT1G31335,AT1G02820,AT2G02450,AT5G65890,AT5G65410,AT3G53920,AT5G27280,AT2G21220,AT5G63060,AT5G64460,AT1G12860,AT2G46910,AT1G07390,AT3G01490,AT2G45850,AT3G56650,AT5G10160,AT4G37270,AT1G74670,AT3G06510,AT3G09050,AT1G32500,AT4G02530,AT5G60270,AT1G13710,AT3G55040,AT2G25080,AT5G59730,AT2G26500,AT4G15690,AT2G23320,AT5G05200,AT5G48170,AT1G29530,AT5G01240,AT1G73110,AT1G53920,AT3G46670,AT3G61310,AT4G28950,AT2G26740,AT5G51010,AT1G49010,AT1G54500,AT3G07870,AT2G26900,AT5G64850,AT2G17300,AT1G06680,AT3G13062,AT1G69870,AT1G22630,AT2G42750,AT1G30520,AT2G39690,AT3G22104,AT3G16010,AT1G53670,AT3G03260,AT5G53490,AT5G58140,AT4G37610,AT4G29070,AT5G10470,AT5G52190,AT2G47540,AT5G53210,AT1G22750,AT5G57390,AT1G03310,AT5G16970,AT3G20300,AT1G18730,AT4G14910,AT1G66840,ATCG00560,AT5G42070,AT3G13000,AT1G06040,AT4G24050,AT3G54820,AT4G14890,AT5G27360,AT5G50700,AT5G24800,AT2G41660,AT1G06180,AT4G11570,AT3G15030,AT5G14970,AT4G30660,AT1G67840,AT1G29390,AT3G55120,AT2G39470,AT5G47650,AT4G28080,AT1G30530,AT3G26080,AT3G04790,AT4G19960,AT4G18480,AT3G46630,AT4G32340,AT1G70610,AT1G31920,AT5G40060,AT3G55330,AT3G61470,AT3G16250,AT2G26530,AT2G34490,AT3G15560,AT1G69160,AT1G71500,AT5G20935,AT2G34910,AT3G44720,AT1G67040,AT2G39730,AT1G32440,AT5G61670,AT1G50020,AT5G64770,AT3G55500,ATCG00570,AT5G14260,AT5G53370,AT2G36470,AT1G64720,AT5G17630,AT1G70760,AT3G53900,AT4G03280,AT5G45700,AT1G03440,AT1G65190,AT2G19900,AT1G49230,AT4G17810,AT3G48200,AT1G16750,AT1G23390,AT5G51200,AT3G21670,AT4G33490,AT1G22885,AT3G51510,AT4G37550,AT4G16410,AT5G59750,AT5G44530,AT3G53280,AT1G49000,AT1G79360,AT3G61250,AT1G75730,AT3G46540,AT4G15700,AT1G02700,AT4G37300,AT2G06520,AT5G59920,AT3G47070,AT1G43560,AT4G15660,AT5G59540,AT5G48300,AT1G74460,AT5G18600,AT4G37930,AT2G21080,AT1G26600,AT1G72910,AT4G21210,AT1G14700,AT2G37240,AT3G04760,AT5G60970,AT1G06650,AT3G19030,AT4G15510,AT5G09660,AT1G02475,AT3G17609,AT4G09010,AT3G51420,AT3G01680,AT3G16220,AT1G21010,AT3G53960,AT5G12050,AT3G29320,AT1G07010,AT1G03680,AT1G62710,AT1G70700,AT1G52510,AT4G15430,AT1G71480,AT5G64840,AT2G28900,AT5G07020,AT5G02030,AT4G33500,AT4G03210,AT5G56850,AT5G13410,AT4G24660,AT1G63310,AT3G11900,AT2G28410,AT5G40380,AT5G26000,AT3G18050,AT3G19000,AT1G78020,AT3G54500,AT5G11070,AT3G20370,AT2G43800,AT4G22753,AT5G16250,AT5G12860,AT1G77930,AT2G29340,AT2G48130,AT4G24130,AT4G25080,AT1G73650,AT4G25140,AT3G62410,AT1G56320,AT3G44880,AT5G16240,AT3G17470,AT2G30950,AT2G41120,AT5G19500,AT5G16810,AT3G58690,AT5G58570,AT5G57350,AT1G13700,AT1G55370,AT4G28250,AT2G42690,AT3G42570,AT5G42290,ATCG00550,AT2G43510,AT1G64970,AT1G29910,AT2G02950,AT5G52570,AT3G20270,AT3G27050,AT5G15780,AT3G07540,AT1G52590,AT4G37000,AT5G48790,AT3G06080,AT2G45190,AT4G04640,AT2G38460,AT1G61810,AT4G12830,AT2G37030,AT1G18250,AT4G03050,AT1G65500,AT1G74070,AT3G47500,AT1G14150,AT2G39450,AT1G52870,AT1G22590,AT1G33590,AT5G22390,AT2G05620,AT3G06390,AT2G20875,AT1G54780,AT3G61890,AT5G01530,AT3G11430,AT1G31330,AT3G61870,AT3G02640,AT1G63970,AT1G61520,AT1G75080,AT3G24140,AT4G18650,AT1G26218,AT3G56080,AT5G62630,AT3G21750,AT1G18020,AT1G45474,AT1G12250,AT2G41280,AT2G46820,AT5G10130,AT3G09600,AT5G57040,AT5G35790,AT4G02770,AT5G54300,AT2G21185,AT1G35290,AT1G68850,AT5G66570,AT3G28270,AT2G21320,AT4G02420,AT5G19850,AT1G66430,AT5G62720,AT3G54900,AT1G74960,AT1G34245,AT5G44310,AT1G27990,AT5G42780,AT5G48540,AT4G21280,AT2G36430,AT1G24400,AT3G17040,AT1G21460,AT3G50750,AT4G32770,AT3G21870,AT1G27480,AT3G23400,AT3G01480,AT5G46450,ATCG00580,AT2G40880,AT5G10310,AT1G77760,AT4G27820,AT3G14930,AT3G26570,AT4G12320,AT3G16140,AT1G79510,AT4G13500,AT3G01500,AT2G21330,AT2G32480,AT3G19720,AT3G63140,AT1G50250,AT3G12320,AT1G07700,AT2G43560,AT3G49260,AT2G21210,AT4G37200,AT5G17050,AT1G70870,AT1G74500,AT3G10060,AT4G13010,AT1G06430,AT5G49160,AT3G02120,AT5G64080,AT4G31840,AT2G34510,AT5G50160,AT4G37470,AT1G30380,AT4G36610,AT3G47430,AT5G66190,AT1G05560,AT2G46340,AT4G02920,AT4G30993,AT1G66130,AT5G17170,AT4G18010,AT1G07180,AT5G13900,AT5G08410,AT5G13720,AT1G75880,AT1G70580,AT1G79790,AT2G23670,AT1G77490,AT4G25050,AT3G16000,AT1G71040,AT5G40170,AT3G50685,AT3G15360,AT1G70820,AT4G34220,AT2G20250,AT1G08630,AT5G36710,AT2G01890,AT3G56940,AT1G55480,AT1G23740,AT2G42770,AT1G64860,AT1G03630,AT5G58330,AT1G34000,AT1G75820,AT1G67740,AT5G36790,AT5G01300,AT5G01015,AT5G04140,AT1G53520,AT1G15290,AT4G27300,AT2G40020,AT1G15820,AT4G12800,AT1G66980,AT5G05290,AT2G23420,AT5G36910,AT2G33815,AT5G17300,AT1G78995,AT1G19730,AT4G15620,AT4G31805,AT3G54050,AT4G04850,AT5G47800,AT1G62030,AT3G55970,AT4G28706,AT1G09340,AT2G23540,AT1G53230,AT4G20430,AT2G35960,AT4G01050,AT1G30260,AT2G15050,AT1G78580,AT4G15490,AT1G05690,AT2G38905,AT5G16540,AT2G01760,AT2G43530,AT1G02300,AT5G15310,AT1G15260,AT2G30570,AT5G17230,AT1G32540,AT2G38230,AT3G02910,AT5G64940,AT3G15570,AT1G71890,AT5G52050,AT5G67030,AT1G54870,AT1G37130,AT5G61520,AT3G16520,AT1G52070,AT5G08050,AT3G47860,AT4G35250,AT5G44870,AT1G59740,AT4G22570,AT1G72610,AT1G78490,AT1G06460,AT4G09350,AT3G52720,AT5G22470,AT5G24420,AT5G18430,AT2G40080,AT5G02120,AT2G31070,AT5G04490,AT1G63360,AT5G46110,AT5G45820,AT1G78460,AT3G04320,AT2G22510,AT4G28750,AT4G16980,AT1G19740,AT1G56500,AT5G13630,AT5G40610,AT5G38990,AT3G62820,AT2G25200,AT5G20230,AT5G51460,AT3G01670,AT3G19480,AT3G53470,AT4G00750,AT3G53040,AT1G04110,AT5G54270,AT4G16370,AT2G20260,AT1G32220,AT3G59060,AT3G02150,AT3G14760,AT4G15680,AT1G12900,AT4G33660,AT1G73830,AT1G65090,AT5G16400,AT3G23410,AT4G37560,AT5G64040,AT4G16690,AT2G47450,AT1G23310,AT3G27925,AT1G44000,AT1G75690,AT5G19940,AT4G23890,AT4G34610,AT3G21760,AT5G02160,AT5G43450,AT3G15840,AT2G37970,AT1G73620,AT4G17970,AT4G32590,AT2G23840,AT1G68520,AT4G19170,AT2G46830,AT5G13580,AT1G32900,AT2G35260,AT2G26580,AT2G46450,AT4G17245,AT1G10360,AT5G46050,AT2G25890,AT1G13930,AT1G52220,AT1G75030,AT4G17840,AT5G13770,AT1G48100,AT1G04660,AT1G15980,AT1G68010,AT3G48700,AT5G54370,AT3G01060,AT2G29320,AT5G35170,AT5G11060,AT2G04039,AT2G20570,AT2G28490,AT2G06925,AT3G05800,AT5G16010,AT3G21055,AT3G20100,AT4G00050,AT2G24820,AT1G19610,AT1G20020,AT3G02830,AT2G34460,AT4G27700,AT1G74730,AT3G44970,AT1G08380,AT2G22540,AT5G09480,AT2G42220,AT4G33000,AT1G14345,AT3G18890,AT3G47470,AT1G51110,AT5G12420,AT1G67400,AT2G23130,AT4G04840,AT5G06760,AT4G33666,AT5G14450,AT3G19800,AT1G51400,AT3G56290,AT1G01060,AT3G53720,AT3G15620,AT1G54740,AT1G16720,AT4G09650,AT4G22890,AT5G44190,AT5G07330,AT1G18060,AT4G36700,AT2G29290,AT5G47610,AT5G27290,AT4G13840,AT2G19650,AT2G43520,AT2G15010,AT4G19530,AT1G52230,AT1G64500,AT2G29650,AT1G47980,AT1G29660,AT3G02730,AT4G22710,AT4G25910,AT1G32520,AT3G10280,AT4G24700,AT5G15850,AT3G50270,AT4G18570,AT4G37310,AT5G62430,AT1G07280,AT4G23600,AT1G58290,AT5G03555,AT5G51720,AT3G48420,AT4G27520,AT5G41050,AT2G32540,AT4G36220,AT1G64900,AT2G46070,AT3G61220,AT3G48720,AT1G59700,AT5G62490,AT1G21540,AT3G53250,AT1G11850,AT5G59250,AT1G65230,AT3G46780,AT4G00950,AT1G32560,AT5G57345,AT1G10640,AT4G38080,AT1G03130,AT1G49750,AT3G26740,AT1G65490,AT5G61420,AT3G62550,AT1G75460,AT1G75100,AT1G68110,AT1G29395,AT1G04350,AT3G47250,AT3G25820,AT3G15850,AT1G05010,AT3G15670,AT1G51805,AT5G54770,AT3G01570,AT1G33600,AT4G23300,AT2G43550,AT1G68830,AT1G73870,AT5G06530,AT1G76100,AT3G25760,AT1G29700,AT5G23060,AT1G04800,AT1G22890,AT4G05180,AT1G54820,AT2G21490,AT2G40170,AT5G25840,AT1G76110,AT1G04560,AT3G59400,AT2G03750,AT2G34430,AT5G09520,AT2G36640,AT3G50820,AT5G24120,AT3G02480,AT4G38420,AT4G14480,AT5G46690,AT3G08940,AT4G39510,AT2G43010,AT5G01740,AT4G37150,AT5G35970,AT5G44580,AT4G16160,AT1G44446,AT3G28220,AT5G37360,AT4G27030,AT4G18740,AT5G06870,AT3G02020,AT4G04330,AT1G33110,AT5G40420,AT3G17520,AT4G26150,AT2G29360,AT5G09530,AT4G24040,AT5G67370,AT3G54890,AT3G51810,AT5G16030,AT2G13610,AT2G43620,AT1G18810,AT4G37980,AT5G48485,AT5G66780,AT2G32860,AT3G46490,AT1G21500,AT2G32100,AT5G55620,AT1G76080,AT3G19850,AT1G60590,AT1G33811,AT5G07240,AT1G48130,AT1G54040,AT2G30520,AT3G54940,AT5G65010,AT3G02380,AT2G05070,AT5G24160,AT4G17090,AT2G34620,AT3G22060,AT5G38980,AT3G14210,AT2G31380,AT3G27690,AT3G57020,AT1G22690,AT4G28780,AT1G66970,AT5G65730,AT4G37800,AT5G48490,AT1G17990,AT1G19350,AT1G26220,AT1G29920,AT1G53233,AT1G62630,AT1G65250,AT1G72930,AT2G05100,AT2G05310,AT2G21187,AT2G26750,AT2G32530,AT2G33810,AT2G34420,AT2G36792,AT2G38210,AT2G46720,AT3G04330,AT3G17070,AT3G21755,AT3G25770,AT3G25830,AT3G26070,AT3G43400,AT4G01350,AT4G12310,AT4G16400,AT4G22690,AT5G14060,AT5G25980,AT5G28450,AT5G36700,AT5G36800,AT5G39000,AT5G50600,AT1G29930,AT2G36790 HU_WT-RC50/WT-D_UP Up-regulated 2-fold in WT-Rc50/WT-D (Table S1 PubmedID:19529817) AT1G02340,AT5G51210,AT4G22460,AT3G12820,AT4G13790,AT5G53660,AT5G47450,AT5G60660,AT5G02580,AT5G57670,AT2G34020,AT4G35720,AT4G10240,AT5G63650,AT5G01320,AT2G33380,AT4G22490,AT1G72290,AT5G22500,AT3G05950,AT1G52830,AT2G21910,AT5G19100,AT5G65800,AT4G16780,AT5G53250,AT5G66590,AT4G14130,AT5G38710,AT4G14465,AT1G02800,AT4G16670,AT4G11610,AT4G36010,AT4G12510,AT1G75780,AT2G28780,AT1G64110,AT5G54190,AT2G32990,AT1G15550,AT2G43050,AT2G43060,AT4G08300,AT4G10020,AT5G44610,AT3G15540,AT4G32280,AT3G59010,AT5G53190,AT5G18060,AT3G54510,AT3G60140,AT3G01260,AT4G11190,AT5G07010,AT4G36110,AT1G16850,AT4G02290,AT1G08500,AT4G14690,AT1G64660,ATCG00065,AT4G25420,AT2G34700,AT4G37010,AT3G59930,AT5G24910,AT4G38400,AT4G39675,AT1G63380,AT4G23870,AT1G01600,AT1G70270,AT2G34315,AT2G18010,AT1G10480,AT5G12940,AT2G19660,AT4G26320,AT3G59900,AT4G32460,AT3G54770,AT2G14210,AT1G64640,AT5G64110,AT1G77330,ATCG00790,AT5G42860,AT5G25160,AT3G54950,AT1G75900,AT3G51410,AT1G04240,AT3G03240,AT1G62280,AT1G70710,AT1G02205,AT2G34500,AT2G37670,AT2G41070,AT3G05150,AT5G15150,AT4G01140,AT1G29460,AT4G13210,AT4G29270,AT5G28080,AT5G43520,AT3G05920,AT3G51895,AT5G60760,AT4G18510,AT3G29575,AT5G15290,AT1G80160,AT3G29370,AT1G10550,AT5G23750,AT1G20160,AT3G26460,AT3G23090,AT1G65920,AT2G28085,AT3G19390,AT4G30140,AT4G23030,AT5G15120,AT1G17430,AT2G47780,AT1G06080,AT1G05490,AT1G08310,AT5G15720,AT2G47270,AT1G75450,AT4G20110,AT5G42500,AT4G17340,AT3G11550,AT3G48460,AT5G50915,AT5G57760,AT3G02550,AT2G20750,AT1G64390,AT3G05890,AT5G43180,AT4G11320,AT5G48900,AT1G23060,AT5G24580,AT5G59010,AT2G43535,AT2G24300,AT4G30410,AT4G25260,AT1G30760,AT4G37220,AT5G59530,AT4G11290,AT1G33170,AT4G21830,AT4G30060,AT2G02820,AT1G18970,AT3G60070,AT2G45210,AT2G21640,AT1G45130,AT3G14370,AT5G66080,AT2G46990,AT5G02260,AT2G25160,AT3G50890,AT4G26390,AT1G29050,AT5G10580,AT3G28180,AT1G32170,AT2G01770,AT4G15400,AT5G39860,AT4G38860,AT3G59695,ATCG01230,AT2G06200,AT4G13580,AT5G06200,AT1G63140,AT3G42800,AT1G69526,AT5G53980,AT5G67520,AT2G21540,AT1G49570,AT1G69570,AT5G59520,AT4G14010,AT1G01780,AT5G10430,AT5G07030,AT5G09440,AT1G01390,AT4G17695,AT2G27370,AT1G64380,AT5G52280,AT2G21880,AT2G32430,AT1G23760,AT4G30420,AT1G56660,AT4G16000,AT3G24290,AT3G55890,AT2G47000,AT2G29440,AT5G11540,AT4G37070,AT5G22740,AT3G25290,AT5G01790,AT1G73640,AT1G31070,AT1G29510,AT3G02040,AT3G61830,AT3G25730,AT1G22740,AT2G37280,AT2G22970,AT4G19120,AT5G66170,AT3G24720,AT1G21980,AT1G70990,AT1G17190,AT4G12550,AT5G02200,AT1G29195,AT4G30290,AT5G47240,AT1G43910,AT3G16490,AT1G28230,AT1G44830,AT5G15580,AT5G47370,AT1G12080,AT1G77200,AT3G16690,ATCG00900,AT2G38400,AT1G05260,AT3G30180,AT3G48520,AT5G67390,AT1G27030,AT1G20190,AT3G55310,AT4G11550,AT1G67910,ATMG01190,AT4G19420,AT1G20070,AT2G17710,AT2G31980,AT5G17910,AT3G63470,AT1G70210,AT4G16515,AT3G28345,AT3G29180,AT1G50560,ATCG00780,AT3G05900,AT5G56540,AT5G63810,AT1G29500,AT1G11545,AT4G23700,AT1G61800,AT1G56010,AT4G29690,AT1G23800,AT5G66390,AT5G59930,AT1G19530,AT1G06980,AT1G76240,AT2G35760,AT3G24450,AT1G11960,AT1G01200,AT3G01220,AT1G61590,AT1G67750,AT1G44800,AT4G21850,AT4G15330,AT3G50660,AT3G23800,AT4G25280,AT2G44910,AT1G19510,AT2G38800,AT2G31945,AT1G71740,AT1G04250,AT5G46240,AT2G35880,AT3G12610,AT1G80570,AT5G63820,AT5G02540,AT3G45970,AT3G02620,AT1G07090,AT1G64330,AT1G01640,AT5G40730,AT1G53080,AT4G35560,AT3G63350,AT2G14900,AT2G17500,AT1G30750,AT4G12080,AT4G23450,AT3G09220,AT3G53200,AT4G34770,AT4G13030,AT1G17060,AT4G28410,AT1G02400,AT5G57480,AT2G41340,AT4G00910,AT3G10340,AT4G09890,AT4G35190,AT4G37580,AT4G37740,AT2G35210,AT4G01950,AT2G44010,AT1G44970,AT5G06740,AT1G52250,AT4G20260,AT5G42180,AT2G37750,AT2G42010,AT1G60060,AT3G20250,AT4G34760,AT1G63220,AT2G21020,AT5G62280,AT1G28330,AT1G01010,AT4G16442,AT1G30080,AT5G07920,AT2G38500,AT5G43580,AT5G19740,AT2G28110,AT5G13870,AT3G61930,AT1G74490,AT4G17220,AT5G65300,AT1G26780,AT3G17420,AT1G69690,AT1G76180,AT2G45050,AT5G25770,AT1G20450,AT1G32450,AT5G23350,AT1G72070,AT2G32240,AT5G41900,AT5G48430,AT1G31040,AT2G45920,AT4G36930,AT3G48020,AT5G16590,AT3G03840,AT2G30210,AT2G36100,AT1G72200,AT2G42570,AT1G78340,AT5G01830,AT3G18200,AT2G39430,AT1G11000,AT2G35820,AT2G44740,AT5G65530,ATCG00490,AT2G38750,AT1G42470,AT3G29075,AT3G57780,ATCG00810,AT1G20900,AT3G17790,AT4G40070,AT1G74010,AT2G22560,AT1G66350,AT1G07740,AT1G30700,AT3G14440,AT1G32640,AT2G36830,AT3G55840,AT1G01470,AT1G73300,AT1G62480,AT4G21340,AT5G55730,AT4G27450,AT4G12880,AT2G36320,AT1G53830,AT4G29140,AT4G00820,AT1G04610,AT2G01150,AT1G23140,AT4G37890,AT4G22780,AT1G63840,AT5G07110,AT4G27260,AT1G30640,AT1G04220,AT3G03170,AT1G74650,AT4G10250,AT5G39320,AT1G61160,AT3G51440,AT1G61260,AT3G15510,AT1G13260,AT1G09570,AT5G03150,AT4G39660,AT3G55910,AT1G16490,AT5G45280,AT4G27460,AT5G56980,AT2G32280,AT1G71697,AT5G15830,AT1G10140,AT5G66210,AT1G05340,AT5G66700,AT1G34110,AT1G06360,AT2G21620,AT5G23870,AT1G01120,AT4G17280,AT5G49800,AT4G38230,AT2G21200,AT2G47160,AT4G20320,AT2G42990,AT1G04680,AT2G28960,AT5G17850,AT5G44670,AT4G37050,AT2G28670,AT5G35580,AT2G46780,AT2G40610,AT5G61660,AT1G55240,AT5G14230,AT3G22740,AT1G21920,AT1G27380,AT4G28720,AT2G24220,AT4G10150,AT5G51670,AT1G08650,AT2G31900,AT5G57050,AT1G77500,AT3G19580,AT2G26710,AT1G53180,AT5G50720,AT4G27970,AT4G23690,AT4G38850,AT2G34300,AT5G59780,AT3G49220,AT1G62990,AT3G16150,AT4G32070,AT2G28400,AT2G30930,AT3G21090,AT1G22180,AT2G40970,AT3G14280,AT2G17840,AT3G08030,AT5G59590,AT4G28650,AT2G39350,AT2G17990,AT3G11580,AT4G39210,AT5G01700,AT5G16730,AT3G15500,AT4G23885,AT5G10930,AT5G61250,AT1G13300,AT4G28890,AT3G50260,AT5G44380,AT3G07990,AT5G13820,AT3G16180,AT5G17700,AT4G36380,AT2G40110,AT2G32660,AT3G28340,AT1G17810,AT1G26960,AT1G53450,AT1G03850,AT5G37790,AT5G04470,AT3G03180,AT2G04500,AT3G23430,AT1G78660,AT4G30400,AT2G36410,AT5G20110,AT5G45670,AT2G26330,AT3G47210,AT1G13280,AT1G20440,AT5G57610,AT4G11820,AT1G74840,AT4G35320,AT4G38580,AT2G22680,AT4G18610,AT3G44990,AT3G17820,AT1G73260,AT4G13310,AT3G05640,AT3G20830,AT3G16340,AT4G05170,AT1G09460,AT5G55170,AT5G07820,AT2G34150,AT4G04830,AT1G62760,AT1G23120,AT5G49630,AT3G58810,AT5G59260,AT1G62770,AT4G16500,AT5G45210,AT5G15180,AT2G25220,AT1G35260,AT4G02090,AT1G02530,AT1G18280,AT3G02990,AT2G24260,AT1G08320,AT5G40780,AT1G70690,AT5G04080,AT1G14350,AT2G46750,AT1G12070,AT5G66330,AT4G31240,AT4G10955,AT4G18970,AT2G37130,AT5G64100,AT2G16790,AT3G48550,AT2G33060,AT1G76090,AT4G39390,ATMG00040,AT5G03530,AT1G60190,AT5G03570,AT4G18280,AT5G49890,AT1G19300,AT5G59050,AT5G22290,AT5G56320,AT2G45510,AT1G79450,AT3G07050,AT1G17620,AT1G01380,AT1G72470,AT5G49710,AT3G22260,AT5G53420,AT2G38640,AT4G30490,AT5G53710,AT2G27140,AT5G51060,AT5G02020,AT2G30360,AT2G41740,AT1G62800,AT1G03790,AT5G20470,AT1G27670,AT5G13460,AT4G20170,AT4G17030,AT3G28740,AT5G50200,AT1G77000,AT5G65390,AT4G39840,AT5G61900,AT4G31100,AT3G13700,AT1G09090,AT3G23030,AT2G32300,AT5G11950,AT3G50900,AT2G44430,AT4G33150,AT3G17120,AT2G37940,AT3G45780,AT5G13080,AT5G44460,AT1G56230,AT5G61560,AT3G09710,AT4G34000,AT2G32580,AT3G55950,AT5G15230,AT5G02190,AT5G47960,AT1G67920,AT1G80280,AT3G08720,AT5G57110,AT3G10260,AT5G58700,AT5G63590,AT1G10560,AT5G19110,AT3G62040,AT3G08040,AT5G06930,AT4G18360,AT5G61570,AT3G04060,AT5G45340,AT2G39980,AT1G52000,AT4G18640,AT4G36790,ATCG00820,AT4G05200,AT2G35270,AT4G03190,AT5G04340,AT1G34630,AT2G37180,AT3G28850,AT5G63970,AT1G04820,AT1G75540,AT4G30080,AT1G50630,AT3G22930,AT1G06850,AT1G74660,AT4G17350,AT4G23400,AT1G79380,AT2G22900,AT2G21100,AT1G78570,AT1G63440,AT3G62090,AT3G48970,AT2G32250,AT3G49860,AT2G25450,AT3G09020,AT5G01820,AT3G48100,AT5G40690,AT3G23050,AT1G76590,AT2G16720,AT1G44170,AT3G21190,ATCG00770,AT5G11970,AT1G20490,AT5G25110,AT3G26440,AT1G79530,AT3G04010,AT4G30670,AT1G31050,AT2G26760,AT1G74760,AT2G41760,AT1G53035,AT5G02550,AT5G57180,AT3G19260,AT2G34650,AT4G21600,AT5G49100,AT3G08860,AT2G33570,AT5G09300,AT1G07420,AT3G61490,AT4G30450,AT4G38060,AT4G17800,AT1G15380,AT3G01930,AT4G01575,AT4G17170,AT5G04860,AT4G27240,AT5G59350,AT1G46768,AT4G34970,AT3G10985,AT3G48940,AT4G00700,AT3G28950,AT1G09575,AT3G53480,AT5G40020,AT1G50010,AT2G42800,AT3G11490,AT2G42890,AT5G65040,AT1G69040,AT3G01750,AT2G01900,AT4G14960,AT4G37530,AT2G01910,AT5G10530,AT4G13130,AT4G37240,AT3G19970,AT3G56200,AT1G03870,AT5G14790,AT5G62170,AT2G41310,AT2G45290,AT2G39130,AT2G44450,AT3G56170,AT2G24240,AT5G53590,AT5G65210,AT1G73760,AT1G30720,AT1G64480,AT5G48560,AT4G22130,AT3G27210,AT4G40010,AT1G08590,AT5G55550,AT1G04430,AT4G17215,AT5G54470,AT4G39070,AT1G62660,AT4G35060,AT1G19870,AT1G33055,AT2G01450,AT3G01350,AT5G05460,AT5G06370,AT4G08160,AT4G12730,AT5G44440,AT4G36360,AT1G48260,AT1G18470,AT5G43350,AT1G14370,AT5G45350,AT2G17290,AT4G14380,AT1G62570,AT4G14290,AT2G23620,AT1G67590,AT5G28300,AT5G02560,AT1G67810,AT4G33030,AT4G15093,AT4G14750,AT4G17460,AT1G02305,AT5G18780,AT3G55720,AT1G11190,AT1G12010,AT1G02860,AT1G15210,AT1G69600,AT2G46740,AT2G47860,AT4G36900,AT4G28050,AT1G78110,AT1G18910,AT3G53670,AT4G17615,AT3G07010,AT2G22860,AT1G53580,AT5G42250,AT1G55210,AT1G19180,AT1G17500,AT5G40760,AT2G47500,AT5G57830,AT2G28260,AT3G11590,AT2G24550,AT4G30160,AT2G39370,AT5G49900,AT1G70900,AT5G06800,AT5G38280,AT4G32500,AT3G06850,AT5G04970,AT1G43020,AT3G28910,AT1G71830,AT1G31060,AT1G18290,AT2G44790,AT4G37790,AT1G19835,AT3G05490,ATMG01000,AT1G47480,AT3G52290,AT4G33420,AT5G67340,AT4G02075,AT3G07420,AT3G02980,AT3G61430,AT2G29980,AT4G25640,AT1G79840,AT3G45960,AT5G47740,AT2G38530,AT3G46130,AT2G02080,AT2G04080,AT4G24480,AT1G04040,AT1G75590,AT3G60390,AT2G07751,AT5G12250,AT1G22530,AT2G25590,AT1G29980,AT3G11340,AT1G22930,AT3G02170,AT4G11050,AT1G63020,AT3G14560,AT4G39640,AT3G10910,AT1G68330,AT1G23380,AT5G48460,AT4G29020,AT5G59700,AT5G46040,AT1G08510,AT4G39140,AT3G05910,AT2G47600,AT5G43780,AT4G30190,AT1G02360,AT2G04800,AT2G07000,AT2G01530,AT1G28130,AT2G27550,AT4G29700,AT5G13810,AT5G64870,AT1G55120,AT3G61160,AT3G19370,AT5G65790,AT3G61060,AT1G02520,AT1G06350,AT1G07730,AT1G16300,AT1G30730,AT1G31885,AT1G62610,AT1G62900,AT2G04066,AT2G07671,AT2G07698,AT2G10560,AT2G33050,AT2G37170,AT2G44890,AT3G02610,AT3G13710,AT3G24300,AT3G55290,AT3G59690,AT4G07670,AT4G10160,AT4G10960,AT4G11310,AT4G12520,AT4G13290,AT4G21840,AT4G37060,AT4G37520,AT5G01330,AT5G20490,AT5G23360,AT5G33355,AT5G36180,AT5G42510,AT5G43370,ATCG00905,ATCG01240,ATMG00990,ATMG01080 HU_WT-RC50/WT-D_DN Down-regulated 2-fold in WT-Rc50/WT-D (Table S1 PubmedID:19529817) AT2G13360,AT4G17250,AT2G26550,AT5G12980,AT3G55630,AT3G16120,AT5G28030,AT3G19170,AT3G10970,AT5G24490,AT3G17465,AT4G01150,AT1G42550,AT3G27400,AT4G22830,AT5G47650,AT3G50560,AT4G08930,AT3G56160,AT1G70310,AT3G19450,AT2G42600,AT5G17660,AT1G67700,AT5G45830,AT1G09900,AT1G29390,AT3G61250,AT2G41660,AT4G19985,AT3G01680,AT4G24830,AT5G53370,AT5G65840,AT2G21220,AT3G18050,AT5G27560,AT1G62960,AT1G23750,AT5G15910,AT1G11860,AT3G07040,AT5G06630,AT2G20920,AT5G24800,AT4G33510,AT4G29080,AT1G32550,AT2G20270,AT5G06290,AT3G61310,AT5G40150,AT3G08010,AT3G53800,AT2G25680,AT5G01300,AT4G39710,AT3G01510,AT3G58140,AT1G30530,AT2G22230,AT1G75080,AT5G14260,AT1G05200,AT5G46470,AT3G03260,AT5G42270,AT2G47840,AT1G73655,AT2G45850,AT1G06180,AT1G77210,AT4G30320,AT4G23190,AT1G28140,AT2G24600,AT5G40170,AT2G01890,AT5G50250,AT5G64460,AT3G21890,AT3G10570,AT3G10840,AT2G46735,AT4G01900,AT1G18460,AT1G21640,AT4G15430,AT5G22470,AT1G62290,AT3G57520,AT1G54520,AT1G18020,AT5G28370,AT3G11170,AT5G23920,AT1G21065,AT5G24300,AT5G19580,AT2G41680,AT2G40880,AT1G10640,AT1G56430,AT5G05730,AT1G07440,AT3G63410,AT1G79040,AT5G62790,AT2G26530,AT4G24350,AT2G23600,AT2G40150,AT2G29090,AT2G47590,AT3G61470,AT4G03150,AT1G77990,AT1G76730,AT2G36250,AT1G73630,AT1G17220,AT5G60970,AT2G21320,AT4G36700,AT3G46540,AT4G13550,AT1G78370,AT5G01410,AT1G17100,AT2G19800,AT1G32900,AT3G49940,AT3G25690,AT2G30540,AT1G21130,AT3G62030,AT2G23320,AT1G53920,AT2G34060,AT1G09420,AT1G64720,AT5G55930,AT4G36610,AT1G32780,AT5G24150,AT1G06040,AT1G66920,AT1G03400,AT1G31190,AT1G16390,AT1G23205,AT5G42310,AT3G14415,AT5G54960,AT1G80720,AT5G61670,AT2G47940,AT2G46220,AT1G23400,AT5G19800,AT2G17230,AT1G61190,AT4G10000,AT5G43260,AT2G44050,AT2G40330,AT3G26710,AT4G39540,AT1G05140,AT4G23570,AT1G68850,AT1G72940,AT1G80450,AT5G52050,AT4G28025,AT3G46630,AT4G00620,AT2G47890,AT5G27360,AT5G18660,AT4G26780,AT1G21010,AT3G11945,AT1G03600,AT1G26770,AT3G22120,AT3G60290,AT2G29540,AT5G23120,AT2G47910,AT1G13270,AT4G35090,AT1G50730,AT5G03690,AT5G17670,AT2G37920,AT4G24120,AT1G10060,AT5G15450,AT4G03520,AT4G37190,AT1G09440,AT4G24130,AT3G21250,AT5G52780,AT5G45930,AT5G55180,AT5G04900,AT3G54420,AT2G43820,AT1G06680,AT1G18250,AT5G02050,AT1G20340,AT1G14980,AT5G39580,AT2G23180,AT2G42130,AT4G14870,AT3G44750,AT5G44510,AT1G19150,AT4G22753,AT4G30800,AT2G26900,AT1G80030,AT1G55450,AT5G52190,AT1G22650,AT3G07870,AT4G31290,AT5G51545,AT1G23390,AT5G49910,AT1G78140,AT3G44720,AT1G74040,AT1G78020,AT4G14910,AT4G38840,AT3G49780,AT4G02420,AT3G51600,AT4G17360,AT3G15060,AT1G65500,AT4G11175,AT3G48560,AT4G37270,AT5G58150,AT4G31840,AT4G23210,AT2G37540,AT3G53960,AT5G61410,AT4G31805,AT2G04790,AT1G15140,AT1G67840,AT1G66840,AT2G01290,AT2G26500,AT5G53210,AT4G29030,AT2G28410,AT3G15030,AT2G43800,AT1G21350,AT3G06080,AT5G09650,AT3G57610,AT3G55120,AT3G56360,AT4G31050,AT2G29310,AT1G68590,AT5G22620,AT5G14970,AT2G06520,AT3G29320,AT1G69935,AT2G02450,AT2G07722,AT3G09580,AT1G56500,AT5G23730,AT1G05690,AT5G06640,AT5G02030,AT3G13160,AT3G11090,AT4G11000,AT2G20570,AT2G31840,AT5G08650,AT1G03055,AT2G16500,AT1G29910,AT5G57350,AT3G06510,AT4G34590,AT1G75730,AT3G23700,AT4G11570,AT4G02770,AT3G11900,AT3G20300,AT1G04660,AT2G48130,AT1G69530,AT1G65090,AT2G45190,ATCG00580,AT5G38660,AT4G24660,AT4G34580,AT3G58690,AT1G54500,AT2G38870,AT3G50750,AT2G40400,AT4G28030,AT4G33500,AT1G29530,AT5G38520,AT3G17470,AT3G52740,AT3G49260,AT2G42750,AT1G02300,AT2G18290,AT5G58010,AT5G15780,AT1G02850,AT4G18480,AT4G38460,AT2G48070,AT5G35630,AT1G11350,AT2G20940,AT1G56320,AT2G30320,AT4G18170,AT2G37030,AT4G31530,AT5G43750,AT5G44550,AT2G25080,AT1G66330,AT5G36160,AT2G23540,AT1G30520,AT3G06390,AT5G13580,AT4G37470,AT4G32980,AT1G76450,AT5G48540,AT4G36530,AT1G80640,AT2G30600,AT4G14890,AT1G18730,AT1G62980,AT1G69523,AT5G19240,AT2G03420,AT2G02950,AT2G04030,AT1G67660,AT1G78510,AT5G01870,AT3G14620,AT5G45780,AT4G28190,AT3G59220,AT3G44880,AT1G68660,AT5G56850,AT3G15680,AT2G33790,AT1G61520,AT2G33590,AT2G01590,AT4G25140,AT1G21460,AT4G22240,AT4G28080,AT5G40060,AT5G17630,AT1G31330,AT1G34310,AT3G15110,AT5G02830,AT4G33470,AT4G08850,AT1G70870,AT1G62030,AT5G60270,AT2G43710,AT3G51510,AT3G55970,AT2G24860,AT2G33255,AT1G49975,AT2G20875,AT5G64080,AT2G28900,AT2G43510,AT1G19620,AT4G34950,AT1G05680,AT3G56940,AT1G17050,AT3G56010,AT1G08550,AT5G04230,AT5G08740,AT1G53670,AT5G22390,AT4G37760,AT5G10160,AT3G02690,AT5G50160,AT3G53250,AT5G18600,AT5G52420,AT1G73110,AT2G21185,AT1G73650,AT1G22400,AT4G20430,AT5G46690,AT3G56650,AT5G54180,AT5G40380,AT1G55960,AT1G79770,AT1G24530,AT1G48030,AT3G19030,AT3G25805,AT2G42690,AT1G32470,AT1G76570,AT5G51200,AT5G23440,AT4G11460,AT5G20140,AT4G09010,AT5G51110,AT5G52970,AT4G03210,AT1G50320,AT4G25080,AT5G59730,AT5G48030,AT4G03280,AT2G30390,AT1G27385,AT5G23070,AT2G34490,AT3G59080,AT5G07460,AT4G25790,AT5G05200,AT5G63060,AT5G53490,AT4G17810,AT2G41090,AT5G05290,AT2G36430,AT4G37610,AT5G24210,AT2G36690,AT3G16140,AT1G35420,AT5G47800,AT5G35790,AT1G12560,AT2G46820,AT3G53280,AT1G18330,AT1G22885,AT4G16990,AT2G22510,AT3G16520,AT3G12780,AT3G13062,AT2G26740,AT5G49160,AT4G10300,AT5G10470,AT1G54870,AT3G54500,AT5G35735,AT1G50020,AT5G59540,AT3G55800,AT2G43860,AT1G44920,AT4G37000,AT5G61520,AT5G11060,AT5G16240,AT1G70610,AT1G79600,AT2G39730,AT1G71500,AT1G64860,AT3G57030,AT1G03440,AT3G53900,AT5G66570,AT2G31790,AT5G09480,AT1G05470,AT2G38310,AT1G03310,AT3G10710,AT5G01530,AT5G50700,AT5G19855,AT3G09600,AT1G69830,AT5G01015,AT5G48790,AT2G28605,AT2G36630,AT3G15570,AT3G01660,AT2G36145,AT5G42780,AT3G55330,AT1G75030,AT2G27290,AT5G16980,AT4G19170,AT2G19310,AT2G26080,AT5G62490,AT3G17930,AT5G51010,AT1G68520,AT3G53920,AT5G52570,AT4G23260,AT2G30950,AT3G14930,AT1G32500,AT4G15690,AT1G24260,AT5G45680,AT1G22590,AT1G49000,AT4G02530,AT1G73620,AT4G04640,AT1G32440,AT5G49480,AT5G46270,AT1G32380,AT2G44920,AT3G51420,AT5G20935,AT5G14470,AT5G10310,AT1G68110,AT2G25890,AT5G58570,AT5G42070,AT5G64840,AT3G50685,AT1G54780,AT5G64850,AT3G16250,AT2G29300,AT4G29070,AT2G46830,AT1G30380,AT1G01060,AT3G62930,AT4G15700,AT1G26600,AT1G15260,AT1G55370,AT1G66430,AT1G74960,AT1G32540,AT1G48930,AT2G37240,AT1G49010,AT5G59920,AT4G23680,AT1G75820,AT5G04490,AT5G64940,AT1G48100,AT2G25735,AT1G42970,AT3G20370,AT5G38510,AT1G33590,AT4G04850,AT1G77930,AT4G31210,AT2G06925,AT2G21080,AT1G53230,AT5G09660,AT4G16410,AT5G62720,AT3G42570,AT2G01870,AT5G15310,AT1G15820,AT2G39450,AT4G24930,AT3G04760,AT4G12800,AT1G30870,AT1G29395,AT4G21280,AT2G47540,AT5G12860,AT3G58550,AT1G74640,AT5G14760,AT4G26260,AT1G77090,AT5G17300,AT1G73870,AT1G77760,AT3G19720,AT3G26080,AT2G36835,AT3G09050,AT5G48300,AT1G45474,AT3G21750,AT3G46670,AT2G05620,AT1G34245,AT2G30570,AT4G13500,AT1G22750,AT4G15660,AT4G34610,AT5G57040,AT1G03630,AT1G22630,AT5G13410,AT3G01670,AT4G16160,AT5G54270,AT3G04790,AT3G22420,AT2G28490,AT5G27200,AT4G18810,AT2G38460,AT2G21210,AT3G24140,AT5G14450,AT4G01050,AT1G03680,AT2G29630,AT5G54370,AT2G31070,AT2G15050,AT1G52590,AT4G33010,AT2G20250,AT3G48200,AT2G36640,AT4G28660,AT2G43530,AT4G37930,AT2G35260,AT3G27050,AT1G77490,AT1G53520,AT1G30260,AT2G20260,AT1G02820,AT4G28706,AT3G54590,AT1G73830,AT1G43560,AT4G16980,AT2G36800,AT1G24400,AT5G07020,AT2G47450,AT5G57540,AT2G39690,AT2G15010,AT3G14760,AT1G70700,AT1G67400,AT3G16000,AT2G43560,AT3G05800,AT2G41990,AT2G01760,AT4G37200,AT3G20270,AT4G18570,AT5G13630,AT3G01480,AT1G01750,AT4G17070,AT2G33815,AT1G67740,AT2G32480,AT5G13720,AT1G79790,AT4G15620,AT5G17230,AT1G13700,AT3G19000,AT5G11070,AT5G16540,AT1G05560,AT1G07010,AT4G13010,AT1G19730,AT1G66130,AT5G59310,AT1G71480,AT5G12420,AT2G23420,AT5G54300,AT3G54900,AT5G58260,AT1G52870,AT5G55280,AT2G43010,AT4G15510,AT5G19940,AT5G58330,AT3G02150,AT1G52510,AT4G39510,AT1G07700,AT1G63970,AT1G78490,AT3G02910,AT3G23400,AT1G06650,AT1G78580,AT1G70760,AT1G35140,AT1G61380,AT5G46110,AT5G67030,AT2G34910,AT1G23740,AT1G24020,AT2G46340,AT2G33250,AT3G17520,AT3G21870,AT4G23890,AT1G74070,AT4G12320,AT4G32770,AT3G16220,AT1G37130,AT1G29660,AT5G19500,AT3G20100,AT1G15290,AT2G39470,AT1G63360,AT1G52220,AT1G31800,AT4G30993,AT2G03310,AT2G32500,AT5G17050,AT3G52720,AT1G43670,AT4G21210,AT2G18370,AT1G69870,AT1G52070,AT1G68570,AT4G28750,AT1G71890,AT5G51460,AT3G59060,AT2G25200,AT1G28600,AT1G66980,AT3G26570,AT5G62430,AT3G61870,AT5G09520,AT3G47070,AT5G16810,AT3G10050,AT5G13770,AT4G02920,AT3G21670,AT3G47860,AT1G04110,AT1G10360,AT3G53470,AT2G22540,AT5G18430,AT3G15360,AT5G57530,AT1G06430,AT1G12250,AT4G25050,AT5G59750,AT1G50250,AT5G08410,AT1G02475,AT2G29340,AT4G33000,AT5G16400,AT5G19850,AT2G40080,AT5G66190,AT2G21490,AT5G35190,AT1G51400,AT5G57560,AT1G65190,AT1G54820,AT4G33666,AT1G19610,AT5G04140,AT5G02120,AT1G71040,AT3G55040,AT1G26218,AT2G42220,AT3G17609,AT3G49960,AT1G72610,AT5G36790,AT1G47980,AT2G23670,AT4G17970,AT1G08380,AT1G34000,AT3G47470,AT3G02830,AT4G22570,AT5G35170,AT5G44870,AT4G00750,AT3G62150,AT5G40610,AT1G07390,AT1G44000,AT4G17245,AT1G23310,AT4G38080,AT5G16970,AT3G01440,AT2G40020,AT1G68010,AT3G62820,AT4G37560,AT1G55480,AT5G06530,AT2G34510,AT1G04560,AT1G58290,AT3G10520,AT5G02160,AT2G21330,AT2G41120,AT3G47430,AT1G52230,AT5G08050,AT4G12830,AT4G27300,AT3G08770,AT3G48700,AT3G21055,AT5G15850,AT4G00950,AT5G64040,AT3G10060,AT3G27925,AT1G12900,AT3G54050,AT1G06460,AT5G44190,AT4G35250,AT5G04960,AT1G79510,AT4G23600,AT2G37970,AT4G27700,AT3G01500,AT1G27480,AT1G75690,AT3G15620,AT1G35290,AT3G63140,AT3G25820,AT2G42770,AT1G23130,AT5G17170,AT4G15490,AT4G09650,AT2G35960,AT1G19740,AT2G46070,AT4G23290,AT5G67400,AT3G46780,AT5G05500,AT3G21760,AT1G78995,AT4G27520,AT1G75880,AT1G32520,AT4G33660,AT3G19800,AT5G42760,AT2G26580,AT5G47610,AT4G27820,AT1G65390,AT2G32860,AT1G09340,AT1G78450,AT3G26740,AT4G17840,AT1G79360,AT2G24820,AT4G25910,AT2G23840,AT5G66780,AT1G13930,AT4G21870,AT3G23410,AT4G16370,AT2G29650,AT1G07280,AT1G14150,AT1G32220,AT4G13840,AT4G19530,AT3G62680,AT3G53720,AT1G70580,AT1G54740,AT2G46450,AT4G22890,AT4G36220,AT5G58770,AT1G76100,AT3G48720,AT1G11850,AT1G15980,AT5G49740,AT2G38230,AT5G46450,AT4G18010,AT3G02480,AT3G01060,AT1G54970,AT3G15840,AT3G18890,AT1G03130,AT3G02020,AT5G09530,AT1G74730,AT5G03555,AT5G38990,AT3G50270,AT3G28270,AT1G20020,AT5G57345,AT1G05250,AT4G16690,AT5G46050,AT4G09350,AT3G59400,AT1G08630,AT1G14345,AT5G59250,AT3G08940,AT2G04039,AT2G23130,AT1G49750,AT3G02730,AT3G19480,AT1G51110,AT5G24420,AT2G34460,AT4G15680,AT1G18060,AT1G44446,AT3G62410,AT1G64500,AT4G00050,AT4G05180,AT2G34430,AT5G61420,AT3G15850,AT4G32590,AT1G59700,AT5G23060,AT5G27290,AT5G16030,AT5G35970,AT2G32540,AT5G16010,AT1G05010,AT5G40420,AT4G02270,AT2G43520,AT4G04840,AT1G59740,AT2G04040,AT1G65230,AT1G75100,AT2G03750,AT4G22710,AT1G16720,AT2G29320,AT4G37310,AT5G54770,AT5G25840,AT2G29290,AT1G75460,AT5G41050,AT5G24120,AT3G62550,AT2G13610,AT1G04800,AT3G62950,AT5G37360,AT1G21540,AT1G60590,AT5G44580,AT4G26010,AT5G06870,AT1G68830,AT3G47250,AT1G22890,AT3G54890,AT4G26150,AT3G54940,AT1G76110,AT1G51805,AT1G29700,AT1G07180,AT3G50820,AT4G14480,AT2G19650,AT1G78460,AT4G24700,AT3G46490,AT4G37980,AT5G01740,AT2G32100,AT2G43550,AT1G70820,AT3G48420,AT3G28220,AT1G72910,AT2G43620,AT1G33600,AT3G56290,AT3G10280,AT4G26530,AT3G19850,AT4G18740,AT4G37150,AT3G02380,AT4G24040,AT5G51720,AT1G33110,AT1G21500,AT1G18810,AT5G55450,AT1G48130,AT4G23300,AT3G61220,AT5G43450,AT5G36910,AT1G04350,AT1G64900,AT4G38420,AT5G55620,AT2G30520,AT4G12470,AT1G54040,AT5G45820,AT5G48485,AT2G29360,AT3G14210,AT3G44970,AT2G05070,AT2G34620,AT5G07240,AT1G33811,AT1G65490,AT5G67370,AT5G65010,AT1G76080,AT4G04330,AT3G27690,AT5G24160,AT4G12480,AT4G27030,AT5G20230,AT3G25760,AT2G31380,AT3G22060,AT4G17090,AT3G57020,AT4G28780,AT1G66970,AT5G38980,AT1G22690,AT5G65730,AT4G37800,AT5G48490,AT1G05240,AT1G17990,AT1G19350,AT1G26220,AT1G29920,AT1G53233,AT1G61180,AT1G62630,AT1G65250,AT1G66910,AT1G72930,AT2G03410,AT2G05100,AT2G05310,AT2G21187,AT2G23590,AT2G26750,AT2G32530,AT2G33810,AT2G34420,AT2G35390,AT2G36792,AT2G38210,AT2G46720,AT3G14420,AT3G17070,AT3G21755,AT3G25770,AT3G25830,AT3G26070,AT3G43400,AT4G00600,AT4G01350,AT4G04020,AT4G12310,AT4G16400,AT4G22690,AT5G05580,AT5G14060,AT5G28450,AT5G28460,AT5G36700,AT5G39000,AT5G49730,AT5G50600,AT5G58140,ATMG00620,AT1G29930,AT1G61300,AT2G36790,AT3G61520,ATMG00170,AT1G61310 HU_YHB-RC50/WT-D_UP Up-regulated 2-fold in YHB-Rc50/WT-D (Table S1 PubmedID:19529817) AT5G51210,AT5G54190,AT1G02340,AT4G13790,AT5G53660,AT4G22460,AT4G35720,AT3G12820,AT5G63650,AT2G34020,AT2G43050,AT5G60660,AT5G02580,AT5G22500,AT5G01320,AT5G57670,AT1G75780,AT5G47450,AT4G11190,AT5G53250,AT1G52830,AT4G10240,AT1G64110,AT1G15550,AT1G02205,AT1G72290,AT5G19100,AT4G36010,AT2G32990,AT2G47780,AT4G16780,AT4G30290,AT3G59010,AT1G08500,AT4G14465,AT5G38710,AT2G33380,AT4G02290,AT4G16670,AT2G43060,AT3G15540,AT5G66590,AT4G12510,AT4G08300,AT5G53190,AT4G14130,AT4G10020,AT5G12940,AT5G07010,AT5G42860,AT4G22490,AT1G02800,AT4G29270,AT5G15290,AT5G10430,AT2G19660,AT4G11320,AT5G65800,AT3G14370,AT1G64390,AT4G33550,AT1G63380,AT2G21910,AT3G54770,AT4G32460,AT1G75900,AT3G23090,AT3G05890,AT4G29690,AT3G26460,AT5G18060,AT1G01600,ATCG00065,AT3G05950,AT4G36110,AT4G11610,AT1G64640,AT1G64380,AT5G48900,AT3G05150,AT4G17695,AT3G51410,AT2G34700,AT1G10480,AT3G05920,AT4G38400,AT3G60070,AT4G32280,AT5G42500,AT4G13580,AT1G70710,AT3G11550,AT4G26320,AT5G15150,ATCG00790,AT4G13210,AT2G38750,AT1G23760,AT1G12080,AT1G04240,AT2G20750,AT4G01140,AT1G70270,AT4G23030,AT4G25420,AT4G17340,AT2G34315,AT4G11290,AT5G07030,AT5G45280,AT3G29575,AT1G45130,AT1G75450,AT5G42180,AT3G28180,AT2G34500,AT3G01260,AT3G48970,AT3G10340,AT4G37010,AT5G15120,AT5G60760,AT2G18010,AT5G44610,AT4G21830,AT1G30750,AT2G31980,AT5G25160,AT5G02260,AT3G54510,AT5G15580,AT1G29050,AT2G37670,AT5G53980,AT1G16850,AT1G01390,AT1G05260,AT2G27370,AT1G11545,AT4G17280,AT1G67750,AT1G70990,AT5G28080,AT1G06360,AT5G24580,AT2G22970,AT2G14900,AT1G65920,AT4G23870,AT1G04220,AT2G14210,AT2G21540,AT1G29195,AT5G23750,AT1G77330,AT4G37070,ATCG00780,AT1G05490,AT3G12610,AT4G12880,AT4G30060,AT1G76240,AT1G20190,AT1G06080,AT5G59530,AT5G66390,AT5G17910,AT4G14690,AT3G48460,AT1G67910,AT2G28780,AT3G50890,AT1G70210,AT1G27030,AT5G06200,AT2G02820,AT1G09570,AT5G45670,AT5G55730,AT4G20110,AT1G31070,AT2G30210,AT3G19390,AT4G01950,AT3G61930,AT5G13870,AT2G46780,AT1G33170,AT5G01790,AT4G23690,AT1G23800,AT2G25160,AT3G03240,AT4G19120,AT5G43520,AT3G55310,AT3G25290,AT5G59010,AT3G17420,AT1G18970,AT1G04250,AT3G59695,AT5G19740,AT1G44970,AT2G47000,AT2G37870,AT2G41070,AT3G28345,AT5G47370,AT4G30410,AT4G25260,AT3G08030,AT4G16515,AT4G34770,AT5G52280,AT2G39430,AT5G40730,AT5G41900,AT4G14010,AT1G62280,AT5G59520,AT1G35260,AT1G10550,AT5G56540,AT1G02400,AT1G17430,AT5G22740,AT5G15720,AT5G07820,AT2G43535,AT1G13300,AT2G32300,AT2G36100,AT1G01120,AT1G21980,AT2G46990,AT5G66080,AT3G51895,AT1G80280,AT2G32430,AT1G73640,AT3G22620,AT5G09440,AT3G18200,AT2G41340,AT5G63590,AT1G29460,AT1G32170,AT5G52310,AT5G57760,AT5G11540,AT3G23800,AT1G69526,AT4G30650,AT4G21850,AT1G23060,AT2G29440,AT3G24720,AT2G24300,AT2G35880,AT1G07090,AT5G10930,AT4G37890,AT4G25280,AT1G04680,AT1G72230,ATCG01230,AT1G77200,AT2G06200,AT1G53830,AT5G65390,AT3G50900,AT3G07990,AT1G44800,AT2G37130,AT2G21880,AT4G26390,AT3G54950,AT5G39320,AT3G57780,AT5G02200,AT3G61830,AT2G38090,AT4G35150,AT1G66350,AT3G29370,AT1G62800,AT2G42570,AT1G01780,AT3G59900,AT3G55890,AT5G67390,AT4G39675,AT5G44440,AT1G17190,AT5G24910,AT2G17500,AT4G09890,AT2G44450,AT5G15180,AT2G26760,AT1G63220,AT1G29500,AT1G60060,AT4G08685,AT4G15330,AT1G63140,AT5G59930,AT1G08310,AT1G20160,AT1G61590,AT5G63810,AT4G30420,AT5G39860,AT3G42800,AT3G05900,AT3G29075,AT5G16590,AT4G23700,AT1G20450,AT1G69690,AT4G20320,AT4G15400,AT2G01770,AT2G45050,AT3G49220,AT1G64330,AT5G46960,AT1G71740,AT1G29980,AT3G16490,AT1G61260,AT5G61660,AT5G20740,AT2G28670,AT1G44830,AT3G20470,AT5G17700,AT3G01220,AT4G11550,AT2G28085,AT1G01200,AT1G20070,AT2G35760,AT1G53080,AT1G14350,AT3G63470,ATMG01190,AT4G17220,AT5G50915,AT1G29510,AT3G25730,AT1G77870,AT3G21240,AT3G21190,AT5G49100,AT5G37790,AT2G40610,AT3G13980,AT5G46240,AT3G02550,AT1G04040,AT3G50660,AT5G46900,AT2G17710,AT2G44910,AT4G14750,AT4G22130,AT1G50630,AT5G66330,AT5G62280,AT1G50560,AT3G22840,AT1G53035,AT4G00910,AT5G49630,AT4G13030,AT1G55210,AT5G65530,AT4G30400,AT2G21640,ATCG00810,AT5G17850,AT4G30340,AT1G26780,AT2G47500,AT4G28650,AT1G19510,AT3G07010,AT2G21100,AT5G07110,AT4G37740,AT1G04820,AT4G14380,AT5G03530,AT2G45290,AT1G19300,AT1G62480,AT3G24450,AT4G10250,AT4G21340,AT4G18970,AT1G30080,AT1G74010,AT5G63970,AT3G16180,AT3G21090,ATMG00080,AT1G76180,AT1G56660,AT1G13280,AT1G11000,AT5G02890,AT3G15510,AT4G02090,AT2G22560,AT4G23450,AT2G16790,AT4G19420,AT1G27670,AT4G21600,AT2G38500,AT4G37580,AT2G19580,AT1G64660,AT5G44670,AT5G63820,AT1G78340,AT5G57480,AT4G18510,AT4G29700,AT5G03150,AT5G58700,AT2G38530,AT1G52250,AT1G17060,AT3G10260,AT3G25640,AT5G25610,AT3G24290,AT4G35560,AT5G59220,AT4G35190,AT1G07740,AT5G59350,AT4G00820,AT2G01150,AT5G48460,AT4G36930,AT5G19110,AT5G65020,AT1G65010,AT1G06980,AT4G27440,AT4G27260,AT1G14120,AT1G30700,AT2G40110,AT1G72070,AT1G08590,AT1G50010,AT3G16340,AT2G32280,AT2G42990,AT3G61490,AT5G14230,AT5G10580,AT5G43180,AT2G33060,AT5G67520,AT2G30360,AT1G78850,AT4G17350,AT2G44740,AT4G28720,AT1G78210,AT2G34150,AT1G80240,AT3G03840,AT3G20130,AT5G45210,AT4G38230,AT3G12710,AT5G05960,AT4G30450,AT1G75710,AT2G17840,AT3G05910,AT1G26960,AT2G37640,AT5G25460,AT4G18030,AT2G37280,AT2G39350,AT2G36490,AT1G75500,AT5G57240,AT4G35320,AT1G62990,AT5G43780,AT1G73300,AT5G14790,AT5G65300,AT1G01380,AT5G11970,AT3G63350,AT4G20260,AT1G70830,AT1G76500,AT1G49310,AT5G61250,AT3G48520,AT2G41740,AT3G03170,AT4G05170,AT1G11600,AT3G11340,AT2G19590,AT4G34000,AT1G62770,AT4G12080,AT4G23820,AT1G72470,AT1G41830,AT2G26710,AT4G39210,AT1G20440,AT1G61800,AT1G56010,AT1G30760,AT3G45780,AT3G59930,AT3G14440,AT1G31040,AT5G53710,AT1G64670,AT5G51670,AT1G56580,AT2G25220,AT4G11820,AT5G03260,AT5G15230,AT2G41310,AT2G29980,AT5G28300,AT2G32240,AT5G66700,AT2G26330,AT4G35350,AT5G23400,AT5G06740,AT4G20140,AT2G35190,AT1G74490,AT4G39390,ATCG00900,AT5G53420,AT1G60190,AT5G62170,AT2G30930,AT1G77500,AT2G42840,AT4G33220,AT1G78570,AT2G38760,AT1G61160,AT3G05490,AT4G02700,AT2G42010,AT2G40475,AT4G39840,AT3G47210,AT1G04610,AT1G19835,AT5G01700,ATCG01110,AT1G15210,AT2G38800,AT2G23170,AT3G27210,AT5G67060,AT3G60390,AT5G59590,AT2G21200,AT1G75540,AT3G12500,AT1G01010,AT5G05180,AT2G47860,AT3G60450,AT3G17820,AT3G61160,AT5G57610,AT3G45960,AT3G17120,AT2G35210,AT5G40020,AT5G57050,AT5G61570,AT5G13460,AT1G17620,AT3G49810,AT1G76790,AT1G67810,AT4G08150,AT4G22010,AT5G49800,AT4G28050,AT4G34760,AT1G28230,AT2G35820,AT1G09090,AT4G39660,AT3G56480,AT1G68330,ATCG00770,AT5G48560,AT5G06930,AT1G28330,ATMG01000,AT5G07920,AT1G32640,AT2G36830,AT3G11580,AT2G39180,AT3G28340,AT1G43020,AT3G02620,AT5G51060,AT3G60140,AT4G19380,AT2G07751,AT2G28960,AT5G03760,AT2G24170,AT2G42800,AT2G34300,AT1G62660,AT4G18640,AT5G27520,AT5G45460,AT1G31710,AT3G26470,AT4G21960,AT5G24290,AT1G18840,AT3G48940,AT2G24220,AT4G02075,AT1G62570,AT3G06035,AT5G57110,AT4G30170,AT5G48450,AT2G17290,AT4G34650,ATCG00360,AT3G48550,AT3G16690,AT3G22600,AT2G22900,AT5G45560,AT1G02220,AT5G66210,AT1G30640,AT3G20250,AT5G07000,AT4G35060,AT4G04830,AT2G43290,AT1G70560,AT5G25770,AT5G66170,AT4G10150,AT2G37750,AT1G32450,AT5G51690,AT4G30140,AT1G47610,AT2G17990,AT1G17700,AT1G22740,AT5G47240,AT5G07680,AT3G17810,AT3G48100,AT1G08320,AT1G47210,AT4G36880,AT1G22910,AT3G25710,AT1G71830,AT1G79530,AT2G37940,AT3G02170,AT1G55120,AT5G62550,AT4G17615,AT4G14960,AT3G52290,AT4G36360,AT1G74650,AT5G20470,AT5G16600,AT1G20900,AT1G24625,AT1G34110,AT2G32580,AT1G01640,AT2G27140,ATCG00820,AT1G56230,AT5G47960,AT3G01190,AT5G01830,AT1G69040,AT1G69570,AT1G52000,AT1G03870,AT4G13310,AT4G33750,AT1G21070,AT5G47060,AT3G09020,AT5G49890,AT3G05640,AT1G28130,AT5G51850,AT5G40690,AT4G34230,AT4G38850,AT5G08000,AT3G01930,AT1G01470,AT1G11960,AT3G62270,AT1G80520,AT3G53200,AT5G35580,AT5G16730,AT1G35720,AT5G57180,AT4G17215,AT1G71697,AT5G23530,AT4G10955,AT4G16500,AT2G21830,AT1G01110,AT5G67340,AT3G55720,AT2G40970,AT3G13650,AT1G06850,AT1G55240,AT1G32100,AT5G56980,AT5G03670,AT5G02540,AT1G63840,AT3G23030,AT1G23380,AT2G35860,AT1G19870,ATMG01360,AT3G48490,AT1G27210,AT3G14220,AT4G23885,AT2G04500,AT5G09980,AT1G47480,AT1G26820,AT2G39130,AT3G19580,AT4G12730,AT1G27380,AT4G39330,AT3G10910,AT5G04970,AT5G44380,AT3G17790,AT5G54200,AT5G59260,AT5G25110,AT2G01450,AT3G55840,AT4G15093,AT5G12250,AT3G22260,AT4G37050,AT1G44170,AT5G54690,AT5G53590,AT5G59490,AT3G09710,AT3G20015,AT2G47630,AT4G27970,AT5G41400,AT3G55950,ATCG00630,AT2G33570,AT5G66420,AT2G45470,AT5G40780,AT1G52540,AT5G61900,AT4G37220,AT1G79840,AT3G09220,AT4G18280,AT4G29140,AT2G47440,AT5G23350,AT4G18610,AT2G22680,AT5G17490,AT3G29030,AT4G01575,AT5G60300,AT2G24800,AT5G44460,AT4G31590,AT1G55260,AT1G12110,AT5G65210,AT5G63450,AT5G13820,AT3G08860,AT2G41820,AT4G03190,AT1G72200,AT3G48020,AT3G08720,AT3G49350,AT1G07750,AT3G56000,AT5G18690,AT2G16720,AT2G47160,AT5G61560,AT5G02190,AT1G04430,AT1G78660,AT4G28410,AT1G60450,AT5G08130,AT4G18360,AT1G74660,AT5G66310,AT5G57970,AT2G34650,AT5G65310,AT1G16490,AT4G30670,AT2G21620,AT3G53480,AT1G17500,AT1G56720,AT5G20110,AT2G46740,AT1G49450,AT1G22180,AT5G65810,AT2G04570,AT5G02440,AT2G45510,AT3G12560,AT3G62020,AT1G71870,AT5G65790,AT5G49520,AT1G53180,AT1G18290,AT1G31060,AT3G02040,AT4G23400,AT3G06370,AT1G02360,AT4G27460,AT1G02530,AT2G31900,AT4G37410,AT1G20490,AT1G75590,AT2G25590,AT4G14290,AT2G27230,AT1G76540,AT3G13520,AT4G23710,AT4G24510,AT3G55910,AT4G29020,AT4G38860,AT2G37710,AT1G63940,AT4G37770,AT1G74840,AT1G69030,AT5G64870,AT3G58810,AT5G15190,AT2G42610,AT4G40010,AT5G64640,AT2G47320,AT5G15490,AT1G42470,AT3G22740,AT3G57630,AT4G22590,AT3G62040,AT5G61000,AT4G08160,AT5G57830,ATMG00040,AT1G03850,AT4G05200,AT2G22500,AT3G52370,AT4G37240,AT3G30180,AT4G30190,AT3G13720,AT3G28860,AT1G29440,AT5G04860,AT1G02810,AT1G10560,AT1G46768,AT5G52550,AT1G68710,AT1G12070,AT1G20010,AT3G60550,AT5G17330,AT1G31050,AT4G03070,AT2G18970,AT4G20170,AT3G58120,ATCG01120,AT2G39370,AT2G01910,AT3G03180,AT4G11050,AT3G56170,AT5G60020,AT5G25170,AT1G17455,AT3G52920,AT2G39920,AT2G27740,AT2G19760,AT1G07240,AT3G16920,AT4G16260,AT1G02305,AT2G04650,AT1G09460,AT1G62790,AT5G51160,AT3G23050,AT5G23870,AT2G42320,AT2G14890,AT2G37180,AT1G63000,AT2G36410,AT3G28850,AT2G03590,AT1G18880,AT3G49930,AT5G50200,AT1G55330,AT2G14100,AT3G26440,AT5G59050,AT4G26940,AT2G34190,AT1G30720,AT2G01610,AT5G43600,AT2G42960,AT3G16500,AT1G52190,AT4G13160,AT3G28950,AT2G39050,AT3G54030,AT1G67590,AT5G02550,AT3G22930,AT5G63410,AT1G14370,AT2G04780,AT1G29080,AT5G13110,AT4G01430,AT3G19970,AT4G27860,AT1G34340,AT2G45430,AT4G04955,AT3G29180,AT1G21920,AT2G28260,AT3G23810,AT4G17800,AT1G63440,AT4G16442,AT4G38770,AT4G31910,AT3G19260,AT3G06770,AT3G54260,AT2G32250,AT1G80570,AT4G09460,AT5G66280,AT1G77920,AT3G21230,AT1G78970,AT1G60010,AT1G30690,AT4G27450,AT1G26690,AT4G26760,AT2G23000,AT2G21140,AT3G07580,AT5G57090,AT5G35370,AT1G13260,AT1G72140,AT3G49840,AT2G32660,AT1G09270,AT5G11000,AT4G39140,AT5G23220,AT3G02240,AT5G12200,AT1G05170,AT3G50260,AT3G14740,AT3G07050,AT3G01750,AT3G02980,AT1G19180,AT5G19600,AT4G30080,AT2G36320,AT2G02780,AT4G28890,AT4G22780,AT5G03170,AT2G19780,AT1G11190,AT5G63140,AT3G11420,AT1G52080,AT5G23860,AT1G18400,ATCG01000,AT3G01100,AT4G00700,AT2G45920,AT2G33820,AT2G45310,AT2G47600,AT3G18960,AT3G16370,AT3G19370,AT3G53670,AT1G14920,AT4G05590,AT5G02620,AT4G27720,AT4G36970,AT3G28910,AT3G16470,AT1G16860,AT4G31750,AT1G68560,AT2G46530,AT2G40280,AT2G27550,AT3G50960,AT5G46910,AT3G45700,AT3G21100,AT4G16770,AT1G70690,AT3G61430,AT5G05460,AT5G63180,AT1G67920,AT5G57150,AT4G27840,AT5G47100,AT5G48110,AT1G55760,AT1G73040,AT1G48260,AT1G07720,AT4G38580,AT5G20700,AT4G17170,AT2G26690,AT2G43040,AT5G55170,AT2G38360,AT2G26390,AT2G01830,AT3G09300,AT1G78110,AT4G36380,AT3G12700,AT1G19710,AT1G78060,AT1G62760,AT2G01900,AT1G77610,AT2G26360,AT5G45550,AT5G43700,AT5G15830,AT5G27220,AT5G64100,AT4G30160,AT1G51860,AT4G00360,AT5G04470,AT2G29130,AT3G53990,AT1G13860,AT3G04910,AT1G28470,AT3G27350,AT1G53310,AT1G08510,AT1G06550,AT4G05120,AT3G22570,AT2G44010,AT4G31100,AT5G49710,AT5G14180,AT1G07420,AT3G09820,AT1G69780,AT1G09310,AT3G44990,AT3G61610,AT4G37400,AT3G16630,AT1G68360,AT1G34460,AT4G36790,AT4G33420,AT2G46750,AT2G03240,AT2G17370,AT3G22540,AT3G51830,AT2G01530,AT5G01520,AT1G20590,AT2G16750,AT4G32500,AT3G02990,AT1G05150,AT5G11800,ATCG00050,AT1G70900,AT5G23420,AT2G28110,AT4G19030,AT4G33950,AT1G69600,AT1G67050,AT2G45210,AT1G09575,AT3G56200,AT5G13810,AT1G77080,AT3G27360,AT5G49900,AT5G53410,AT5G65970,AT2G34070,AT1G69080,AT5G09850,AT5G43060,AT3G03520,AT1G55840,AT3G56250,AT3G20510,AT1G53450,AT4G01070,AT1G08890,AT2G43080,AT5G60890,AT2G02960,ATCG00800,AT3G16460,AT5G63600,AT1G79380,AT5G11950,AT3G43960,AT1G05620,AT1G72700,AT2G39705,AT5G17160,AT3G27200,AT2G37040,AT2G21050,AT4G15230,AT3G18000,AT1G59650,AT3G01780,AT5G48500,AT2G07708,AT1G29450,AT1G30900,AT5G04890,AT2G37950,AT3G53610,AT3G58710,AT3G26720,AT5G46040,AT2G06850,AT2G41760,AT1G66800,AT5G19930,AT5G01075,AT2G44940,AT2G22080,AT1G49580,AT1G52700,ATCG00170,AT1G02520,AT1G06350,AT1G07730,AT1G08900,AT1G16300,AT1G18890,AT1G20610,AT1G30730,AT1G62610,AT1G62900,AT1G78860,AT2G03480,AT2G03600,AT2G07671,AT2G07698,AT2G10560,AT2G23010,AT2G33050,AT2G37170,AT2G44890,AT2G45315,AT3G02610,AT3G24300,AT3G55290,AT3G59690,AT4G01580,AT4G05110,AT4G07670,AT4G10160,AT4G10960,AT4G11310,AT4G12520,AT4G13290,AT4G21840,AT4G35160,AT4G37060,AT5G01330,AT5G06150,AT5G20490,AT5G23360,AT5G33355,AT5G36180,AT5G42510,AT5G45470,AT5G46890,AT5G46950,AT5G51680,ATCG00905,ATCG01130,ATCG01240,ATMG00090,ATMG00500,ATMG00990,ATMG00490,ATMG01080 HU_YHB-RC50/WT-D_DN Down-regulated 2-fold in YHB-Rc50/WT-D (Table S1 PubmedID:19529817) AT2G26550,AT3G13160,AT2G45440,AT1G18680,AT5G15310,AT5G13280,AT5G17660,AT4G15110,AT1G36320,AT3G03630,AT1G53920,AT2G43235,AT5G13370,AT2G40100,AT1G12430,AT5G63790,AT1G18850,AT5G19220,AT4G25140,AT3G22120,AT5G24970,AT5G58580,AT1G29940,AT2G20270,AT1G14720,AT2G36990,AT2G40400,AT3G01210,AT3G57990,AT4G24140,AT4G28450,AT2G17220,AT2G05160,AT4G24830,AT2G37760,AT1G60230,AT4G27390,AT2G33180,AT1G78200,AT3G22370,AT3G03260,AT5G11880,AT1G06830,AT5G49160,AT4G13720,AT3G54720,AT1G77630,AT2G35290,AT4G34190,AT4G18170,AT1G06680,AT1G24340,AT5G14070,AT2G34060,AT4G00880,AT5G54290,AT1G75490,AT1G51580,AT1G13710,AT3G49470,AT1G67700,AT2G44050,AT5G18750,AT3G50060,AT2G29940,AT4G16480,AT1G34210,AT4G00030,AT4G19960,AT5G25450,AT4G29510,AT5G13730,AT4G21860,AT4G38150,AT3G26220,AT3G01490,AT1G15260,AT5G53920,AT5G52110,AT1G65840,AT4G24670,AT5G45780,AT1G36390,AT2G27680,AT3G61210,AT4G08850,AT2G15690,AT2G17033,AT4G18480,AT2G39190,AT2G15620,AT5G61600,AT5G56100,AT1G02620,AT2G01850,AT5G19240,AT1G64680,AT4G25170,AT5G61880,AT5G56600,AT5G67110,AT4G13830,AT3G29320,AT2G43860,AT5G43190,AT1G29395,AT1G70000,AT1G79040,AT2G39250,AT5G24300,AT3G09350,AT2G17230,AT3G62470,AT3G11900,AT2G20250,AT5G38890,AT4G02420,AT4G33980,AT5G08380,AT4G12060,AT4G33490,AT5G38290,AT3G57770,AT4G23210,AT3G15830,AT2G30140,AT1G62250,AT5G65380,AT4G34830,AT2G23760,AT3G47800,AT2G41100,AT5G09590,AT3G56010,AT1G21130,AT1G68590,AT2G21890,AT5G50700,AT3G20100,AT3G18500,AT2G26040,AT5G64940,AT4G30800,AT1G49840,AT1G10340,AT2G21970,AT1G78020,AT5G48170,AT2G47990,AT1G03310,AT1G69230,AT2G04700,AT1G64720,AT2G31750,AT2G23390,AT5G16650,AT3G61470,AT1G12020,AT1G11320,AT3G46970,AT2G35155,AT4G13250,AT5G15450,AT1G19150,AT1G55280,AT3G17040,AT4G37295,AT2G21280,AT3G47450,AT2G46220,AT1G29910,AT1G15140,AT4G03410,AT1G71260,AT4G15260,AT5G67290,AT5G57540,AT1G75410,AT3G51600,AT1G03630,AT1G21670,AT3G57610,AT1G29390,AT1G75200,AT2G02950,AT1G78490,AT2G43650,AT3G09650,AT5G25120,AT5G24520,AT2G16070,AT4G17540,AT5G39830,AT2G15680,AT3G05800,AT3G03890,AT4G09010,AT5G03650,AT4G24050,AT3G54420,AT2G03420,AT1G51100,AT3G56160,AT3G49940,AT5G07460,AT1G32580,AT5G19580,AT3G09390,AT1G13670,AT5G10380,AT1G75820,AT1G23205,AT3G49260,AT4G34138,AT5G13220,AT1G72450,AT4G11000,AT5G64650,AT1G05200,AT1G67070,AT3G03040,AT5G64460,AT1G64860,AT3G44380,AT1G49970,AT5G01920,AT5G08340,AT4G34240,AT5G59030,AT2G23610,AT4G16155,AT1G07440,AT2G45190,AT1G10500,AT2G21385,AT4G10030,AT5G12980,AT1G61190,AT4G14870,AT1G48460,AT3G06320,AT3G20930,AT3G08010,AT4G32340,AT4G34730,AT1G60850,AT2G21960,AT5G22270,AT5G47840,AT2G22360,AT4G28740,AT5G13650,AT5G64280,AT5G22830,AT5G44550,AT1G32540,AT5G64290,AT5G50250,AT3G63410,AT3G56140,AT3G16175,AT2G47730,AT3G47490,AT2G47940,AT5G27560,AT3G25480,AT3G04810,AT1G20340,AT3G09600,AT1G56500,AT1G22850,AT2G07140,AT4G02770,AT1G66430,AT2G02450,AT3G52720,AT3G14930,AT1G53460,AT2G25680,AT4G14660,AT2G42690,AT5G45170,AT5G27200,AT5G02810,AT5G17870,AT5G15910,AT4G18240,AT2G34660,AT2G29760,AT1G69530,AT3G26580,AT1G09130,AT1G31190,AT2G42750,AT3G06780,AT2G28900,AT3G57760,AT4G31050,AT1G31330,AT5G16960,AT1G18170,AT1G32160,AT4G27710,AT3G56360,AT1G80030,AT1G22885,ATCG00580,AT2G06520,AT1G03360,AT1G10920,AT1G05140,AT2G28490,AT4G34740,AT5G49820,AT1G67660,AT2G46250,AT5G54930,AT2G39690,AT1G48570,AT3G58140,AT5G35100,AT1G69390,AT5G18140,AT5G25630,AT1G30520,AT4G28080,AT2G34860,AT1G08980,AT5G44530,AT1G03600,AT4G25130,AT5G61410,AT3G60980,AT5G50210,AT5G02150,AT5G55710,AT4G28390,AT3G19030,AT3G15030,AT1G70310,AT1G21065,AT5G17310,AT1G77060,AT3G14690,AT4G29590,AT3G11170,AT3G23580,AT1G16510,AT1G62750,AT3G26710,AT3G56940,AT2G24600,AT4G38460,AT5G40170,AT2G38270,AT2G20860,AT4G23010,AT3G26080,AT5G06290,AT1G32070,AT5G35630,AT3G56630,AT3G53800,AT3G09580,AT1G05690,AT3G16670,AT5G40060,AT3G44720,AT1G17100,AT1G44920,AT4G33540,AT1G54820,AT4G11600,AT1G17220,AT1G26770,AT1G76730,AT2G47540,AT1G50320,AT1G10760,AT4G13510,AT5G42310,AT2G48070,AT5G58150,AT5G46470,AT2G26500,AT1G54500,AT4G33470,AT1G72940,AT3G12685,AT1G53430,AT5G10310,AT5G03030,AT5G15780,AT3G14415,AT5G17670,AT1G73655,AT5G38520,AT3G16520,AT1G64770,AT1G03620,AT1G09420,AT1G73110,AT1G33590,AT5G47560,AT5G03690,AT2G43710,AT1G74040,AT3G52072,AT3G21890,AT2G04790,AT5G49910,AT3G50790,AT3G10710,AT4G23570,AT5G43750,AT5G22300,AT3G21790,AT4G34610,AT5G01015,AT3G15352,AT2G22870,AT1G49880,AT5G65840,AT2G42130,AT3G12320,AT4G11175,AT3G29810,AT3G26630,AT2G33255,AT1G77490,AT4G26520,AT3G11945,AT1G66920,AT4G37470,AT5G14730,AT1G02300,AT5G42270,AT5G23120,AT5G53450,AT2G34910,AT4G37370,AT2G37920,AT1G16080,AT5G46780,AT5G01530,AT2G01110,AT4G19450,AT5G64170,AT2G36250,AT1G75270,AT4G24660,AT4G03520,AT2G39020,AT2G41680,AT2G20875,AT3G46610,AT4G10040,AT1G61520,AT1G42550,AT5G05440,AT4G20010,AT1G15820,AT5G12110,AT4G10000,AT1G67840,AT4G33500,AT2G45740,AT2G01590,AT3G48560,AT1G32470,AT2G47840,AT1G27730,AT5G52970,AT1G53230,AT2G46820,AT5G62840,AT5G63780,AT5G52780,AT1G11340,AT1G06240,AT5G47650,AT1G34310,AT2G45850,AT2G20020,AT1G53520,AT4G09900,AT3G05180,AT1G32900,AT4G25790,AT3G10970,AT5G64850,AT5G61670,AT5G14970,AT5G67480,AT1G21400,AT5G59730,AT1G14980,AT2G42280,AT5G51545,AT2G13360,AT4G26700,AT5G04230,AT3G19720,AT5G02830,AT2G46910,AT2G16700,AT4G25080,AT1G48100,AT5G48790,AT3G53280,AT4G33510,AT4G23190,AT3G44020,AT2G30320,AT2G01760,AT2G35490,AT3G23700,AT3G02060,AT2G33710,AT5G35790,AT4G26780,AT1G29530,AT5G04900,AT1G18020,AT4G15770,AT1G66840,AT5G57550,AT1G04110,AT4G11460,AT2G43510,AT1G75030,AT1G76520,AT4G08280,AT4G02530,AT4G13550,AT1G76450,AT3G46630,AT2G12290,AT1G55910,AT5G27360,AT4G08870,AT1G21010,AT1G52160,AT1G78600,AT3G16140,AT1G06180,AT5G06530,AT1G77210,AT1G21680,AT1G11850,AT2G20570,AT3G49780,AT2G16500,AT1G11290,AT4G13220,AT3G07040,AT3G50750,AT4G02260,AT5G24490,AT5G45680,AT3G12780,AT1G48030,AT1G69720,AT5G19540,AT5G17760,AT4G00620,AT3G58690,AT3G57520,AT5G51110,AT5G66570,AT4G37190,AT4G21990,AT1G56510,AT3G15060,AT3G07870,AT1G57770,AT5G64240,AT5G47800,AT5G42070,AT2G20920,AT5G10470,AT3G55800,AT3G16250,AT1G18730,AT5G53210,AT2G30390,AT1G30380,AT5G56850,AT5G17230,AT4G25650,AT2G38290,AT4G03150,AT2G30600,AT1G31170,AT1G15510,AT1G65240,AT1G06040,AT2G42600,AT5G60970,AT1G68520,AT4G27990,AT4G28706,AT3G25820,AT5G15240,AT2G39450,AT2G21220,AT4G22200,AT5G40380,AT5G50100,AT1G32780,AT5G40500,AT5G54270,AT5G24800,AT4G12800,AT5G38660,AT1G70810,AT1G21350,AT4G14890,AT5G54170,AT2G18290,AT4G38080,AT4G39540,AT5G22620,AT5G24460,AT4G15550,AT2G25450,AT5G04490,AT4G03280,AT2G39730,AT1G32500,AT4G38840,AT3G48700,AT1G30260,AT1G54780,AT2G43010,AT3G42570,AT5G17630,AT5G51440,AT5G40420,AT3G29290,AT2G25080,AT4G17250,AT5G55180,AT3G15570,AT1G10270,AT2G44920,AT5G65890,AT4G28660,AT4G04640,AT2G21320,AT4G28030,AT5G50450,AT5G05420,AT5G64490,AT1G77760,AT1G68110,AT1G28140,AT1G13270,AT1G75280,AT2G47450,AT5G02030,AT1G07050,AT3G01670,AT5G22390,AT4G32980,AT5G51070,AT4G21280,AT2G47910,AT5G16240,AT1G67740,AT3G50685,AT5G53490,AT1G71460,AT3G24190,AT3G16000,AT5G44130,AT2G21185,AT1G31790,AT4G17360,AT4G18570,AT5G52190,AT1G35420,AT4G28025,AT5G18430,AT3G25690,AT4G35090,AT3G57030,AT5G54960,AT2G46340,AT4G37270,AT1G23400,AT2G32880,AT2G29540,AT4G34131,AT3G55970,AT5G24150,AT4G01050,AT1G69523,AT4G31530,AT3G15110,AT5G01410,AT5G11060,AT5G08650,AT1G67400,AT1G79790,AT5G52250,AT3G19170,AT4G22830,AT2G30570,AT2G03780,AT5G05290,AT5G42780,AT1G68660,AT2G15050,AT1G62960,AT5G52050,AT2G18370,AT4G16980,AT1G53670,AT1G50040,AT5G64840,AT3G56650,AT4G28190,AT2G42220,AT5G04960,AT5G52420,AT5G59400,AT5G59920,AT2G47890,AT4G10300,AT3G55330,AT5G11840,AT3G59140,AT1G65390,AT2G36145,AT4G00750,AT5G10160,AT1G66160,AT2G36690,AT3G13740,AT1G73750,AT2G31840,AT5G08740,AT5G57350,AT3G01970,AT5G64770,AT1G77090,AT2G23420,AT1G13810,AT1G35290,AT4G17810,AT1G43160,AT2G37030,AT3G14760,AT1G42970,AT2G31070,AT2G24860,AT1G14300,AT1G62510,AT5G13630,AT2G29630,AT5G20935,AT3G01440,AT2G06925,AT5G53970,AT3G04760,AT1G24530,AT1G03440,AT4G14910,AT2G36630,AT5G27280,AT4G15510,AT4G03400,AT5G60270,AT1G78510,AT1G15010,AT5G14760,AT3G06510,AT2G05620,AT1G54520,AT5G19940,AT4G37000,AT3G47500,AT5G63060,AT3G06080,AT5G58330,AT1G01060,AT2G46735,AT2G48020,AT3G21250,AT2G38310,AT1G43560,AT5G62720,AT1G58340,AT5G20140,AT1G55930,AT1G74070,AT3G51510,AT2G26080,AT4G24930,AT3G59080,AT5G55280,AT5G46110,AT5G51010,AT5G59540,AT2G23600,AT2G43560,AT3G48720,AT1G73830,AT3G16120,AT1G19610,AT4G24120,AT3G01480,AT4G34590,AT3G52740,AT5G48030,AT1G03400,AT3G01660,AT3G48200,AT2G41380,AT1G19620,AT2G45560,AT3G27110,AT1G55370,AT5G40610,AT3G21750,AT2G20260,AT4G37610,AT5G39580,AT3G02690,AT4G16410,AT2G40330,AT3G07700,AT5G02180,AT1G69935,AT1G70760,AT5G23070,AT1G22570,AT1G03680,AT4G17070,AT2G31790,AT5G23730,AT1G78140,AT4G26260,AT3G12580,AT3G17470,AT5G45830,AT3G02830,AT3G53920,AT2G43820,AT1G62030,AT5G23440,AT1G15290,AT3G20300,AT1G24400,AT5G19500,AT2G01290,AT5G48300,AT1G71030,AT5G13410,AT1G21640,AT4G23890,AT5G12860,AT1G76690,AT1G10060,AT2G01860,AT2G35960,AT1G13700,AT1G51400,AT1G66330,AT4G16990,AT2G36835,AT4G28750,AT4G31210,AT3G49960,AT5G16540,AT5G10120,AT2G29310,AT3G13062,AT5G58260,AT3G17930,AT1G70610,AT5G09660,AT1G45474,AT3G23400,AT2G30950,AT2G04030,AT1G07700,AT2G34510,AT3G04790,AT2G33815,AT1G23390,AT1G27385,AT3G44880,AT3G51420,AT3G02020,AT1G26218,AT1G73870,AT5G43260,AT5G67400,AT2G33590,AT4G37930,AT3G54900,AT1G37130,AT4G11570,AT5G18600,AT2G15020,AT1G73650,AT2G27290,AT3G09050,AT5G36790,AT1G73630,AT1G08550,AT1G47980,AT1G26600,AT1G71500,AT1G10360,AT3G54050,AT1G74960,AT2G39470,AT1G75730,AT5G46050,AT2G38460,AT1G58290,AT2G04795,AT1G72610,AT5G51460,AT2G35260,AT1G54970,AT5G46270,AT2G28605,AT5G17300,AT5G11070,AT4G36530,AT1G62400,AT3G11090,AT4G16563,AT3G27050,AT3G53960,AT3G24140,AT2G26740,AT4G33010,AT2G47180,AT1G49010,AT1G22630,AT3G53470,AT1G77930,AT3G26570,AT1G32440,AT5G36160,AT5G52570,AT4G12320,AT5G05200,AT1G17050,AT5G08050,AT1G79770,AT5G54180,AT4G27830,AT5G16030,AT1G52870,AT4G25050,AT4G30993,AT1G07390,AT3G02910,AT2G37240,AT3G50560,AT1G52220,AT1G44000,AT5G54300,AT1G08380,AT3G47470,AT1G03055,AT3G61870,AT3G25805,AT5G16400,AT1G52230,AT3G46490,AT3G47860,AT3G21055,AT4G22240,AT5G64040,AT2G40020,AT1G66980,AT5G13770,AT1G32380,AT1G22590,AT1G71480,AT4G23600,AT1G20350,AT5G66190,AT1G12900,AT5G28030,AT4G13500,AT1G76570,AT4G04850,AT1G50020,AT1G78580,AT2G41990,AT1G07010,AT3G54940,AT5G02160,AT2G33790,AT2G46830,AT4G09650,AT3G01500,AT4G16370,AT5G13720,AT1G02475,AT5G07020,AT4G21210,AT1G54040,AT1G55960,AT1G02820,AT1G34245,AT3G18890,AT2G43530,AT1G61380,AT5G52640,AT1G31800,AT4G02920,AT4G29070,AT1G69830,AT5G02120,AT2G32860,AT3G22640,AT4G22570,AT1G70700,AT3G63140,AT2G21210,AT3G21870,AT3G10520,AT5G17050,AT4G13010,AT2G21330,AT3G15620,AT5G57040,AT1G23740,AT2G25735,AT1G78995,AT2G32480,AT2G01870,AT3G60690,AT3G04000,AT4G19170,AT4G27700,AT3G22420,AT5G19855,AT1G44446,AT3G19000,AT2G23670,AT1G69870,AT5G23060,AT3G46780,AT5G38510,AT2G21080,AT3G54500,AT4G18810,AT2G19310,AT3G62930,AT5G44190,AT3G10060,AT2G32500,AT3G10050,AT1G76100,AT1G09340,AT1G68010,AT1G02930,AT4G33000,AT3G59400,AT5G47610,AT1G23310,AT1G06650,AT1G13990,AT1G34000,AT1G18330,AT5G15850,AT1G22400,AT2G42770,AT2G16660,AT1G02850,AT1G63970,AT4G23260,AT1G03130,AT2G37540,AT4G17245,AT4G00950,AT3G47070,AT1G52590,AT1G24260,AT5G61420,AT1G74640,AT1G59740,AT1G66130,AT4G27520,AT5G38990,AT1G27480,AT5G58570,AT2G29340,AT5G44870,AT3G08940,AT1G50250,AT4G05180,AT3G55040,AT5G08410,AT5G62430,AT2G33250,AT1G14150,AT5G59750,AT4G15690,AT2G30540,AT4G37200,AT4G37760,AT3G59060,AT1G65190,AT3G62820,AT3G15360,AT5G17170,AT1G19730,AT1G79600,AT2G29300,AT1G43670,AT4G12830,AT5G04140,AT4G13840,AT1G22750,AT5G62360,AT1G55480,AT5G35735,AT5G16810,AT3G27925,AT1G28600,AT5G03555,AT3G47430,AT5G24210,AT1G05250,AT2G26580,AT1G63360,AT4G32770,AT1G71040,AT5G55450,AT4G35250,AT1G49750,AT5G49480,AT2G22540,AT3G02150,AT1G52510,AT4G26010,AT2G13610,AT1G75690,AT3G21670,AT3G21760,AT2G25200,AT1G20020,AT1G21540,AT4G25910,AT3G20270,AT1G04800,AT2G04039,AT1G79360,AT3G17609,AT1G15980,AT3G28270,AT2G46450,AT2G43620,AT5G59250,AT5G57345,AT4G36220,AT3G50270,AT1G12250,AT4G33666,AT3G26740,AT3G16220,AT1G74730,AT5G35170,AT2G37970,AT5G67030,AT3G15440,AT4G21870,AT4G34950,AT4G17970,AT1G32520,AT4G15700,AT1G79510,AT4G22890,AT2G34430,AT5G19850,AT5G24420,AT4G33660,AT5G35970,AT2G43550,AT2G03750,AT1G05010,AT4G27820,AT1G68570,AT1G14345,AT1G75880,AT2G40080,AT4G09350,AT5G44580,AT1G06460,AT4G19530,AT3G19800,AT1G48130,AT2G29090,AT1G19740,AT1G54740,AT3G46670,AT1G56300,AT4G37560,AT1G70580,AT2G46070,AT3G02730,AT1G64780,AT5G14470,AT4G27300,AT1G75100,AT2G32540,AT3G19480,AT2G38230,AT3G01060,AT1G18060,AT4G16690,AT1G06430,AT2G23130,AT5G46450,AT1G32220,AT3G62150,AT2G41120,AT5G16980,AT2G29650,AT3G15840,AT3G53720,AT2G43520,AT1G07280,AT1G51110,AT3G54890,AT1G05680,AT3G62410,AT2G03310,AT1G64500,AT3G50820,AT4G22710,AT5G16970,AT1G75460,AT5G54770,AT1G22890,AT3G02380,AT2G34460,AT5G41050,AT1G08630,AT4G04840,AT4G32590,AT1G78450,AT5G06870,AT2G24820,AT1G16720,AT3G19850,AT2G34620,AT3G23410,AT4G23290,AT5G37360,AT1G60590,AT4G17840,AT3G14210,AT4G18010,AT5G16010,AT1G33600,AT4G15660,AT4G00050,AT1G05560,AT1G21500,AT5G27290,AT4G14480,AT3G10280,AT5G01740,AT1G65230,AT2G29290,AT2G23840,AT3G47250,AT1G59700,AT4G37150,AT3G15850,AT1G78460,AT2G36800,AT3G62550,AT3G14620,AT1G76110,AT2G32100,AT1G68830,AT2G19650,AT2G37770,AT4G24700,AT2G29320,AT4G23300,AT4G26150,AT1G13930,AT5G42760,AT5G25840,AT3G05730,AT1G51805,AT1G72910,AT1G23130,AT3G56290,AT2G30520,AT4G12470,AT5G55620,AT4G18740,AT5G24120,AT1G29700,AT3G48420,AT4G24040,AT4G37310,AT3G27690,AT4G37980,AT2G05070,AT5G51720,AT5G49740,AT2G29360,AT5G57560,AT1G18810,AT5G48485,AT1G33811,AT1G04350,AT3G28220,AT4G38420,AT4G15680,AT5G65010,AT5G58770,AT5G36910,AT5G07240,AT3G62950,AT1G33110,AT4G28780,AT1G35140,AT1G70820,AT1G07180,AT3G44970,AT3G61220,AT4G15490,AT5G67370,AT5G24160,AT1G64900,AT5G43450,AT2G04040,AT1G65490,AT1G76080,AT3G22060,AT5G45820,AT2G31380,AT1G66970,AT4G27030,AT4G04330,AT4G26530,AT5G38980,AT4G17090,AT3G57020,AT5G48490,AT4G12480,AT3G25760,AT5G65730,AT4G37800,AT5G20230,AT1G22690,AT1G02920,AT1G05240,AT1G17990,AT1G26220,AT1G29920,AT1G53233,AT1G61180,AT1G62630,AT1G65250,AT1G66910,AT1G72930,AT1G76680,AT2G03410,AT2G05100,AT2G05310,AT2G21187,AT2G21730,AT2G23590,AT2G26750,AT2G32530,AT2G32870,AT2G33810,AT2G34420,AT2G35390,AT2G36792,AT2G38210,AT2G46720,AT3G14390,AT3G14420,AT3G15820,AT3G17070,AT3G21755,AT3G25770,AT3G25830,AT3G26070,AT3G43400,AT3G44120,AT3G52070,AT3G62540,AT4G00600,AT4G01350,AT4G04020,AT4G08900,AT4G12310,AT4G13505,AT4G16400,AT4G19700,AT4G22690,AT4G34135,AT5G05580,AT5G13360,AT5G14060,AT5G14350,AT5G18790,AT5G28450,AT5G34780,AT5G36700,AT5G39000,AT5G49730,AT5G50600,AT5G58140,AT1G29930,AT1G61300,AT2G36790,AT5G14820,AT1G61310 HU_PHYAPHYB-D/WT-D_UP Up-regulated 2-fold in phyAphyB-D/WT-D (Table S1 PubmedID:19529817) AT1G72290 HU_PHYAPHYB-D/WT-D_DN Down-regulated 2-fold in phyAphyB-D/WT-D (Table S1 PubmedID:19529817) AT3G07800,AT4G21070,AT5G49480,AT4G02390 LARUE_DEX_DVL4-MOCK-TREATMENT_UP Up-regulated genes (5-fold expression) that were responsive to dex-induced DVL4 expression relative to mock treatment and also responded with a significant difference in expression from that of the dex-treated control plants (Table S1 PubmedID:19529817) AT1G56010,AT3G01840,AT3G58060,AT1G60740,AT1G21310,AT1G14220,AT2G45900,AT5G13170,AT2G41070,AT5G11920,AT4G32280,AT2G02990,AT2G46410,AT1G63300,AT2G47010,AT1G74810,AT5G07500,AT1G05680,AT3G21420,AT1G48100,AT1G75990,AT5G65140,AT5G23830,AT4G30290,AT1G49830,AT2G45210,AT4G14695,AT3G62590,AT4G12480,AT5G47130,AT5G59080,AT5G13220,AT5G01820,AT1G28010,AT2G46640,AT4G30940,AT5G07820,AT5G23130 LARUE_DEX_DVL4-MOCK-TREATMENT_DN Down-regulated genes (5-fold expression)that were responsive to dex-induced DVL4 expression relative to mock treatment and also responded with a significant difference in expression from that of the dex-treated control plants (Table S1 PubmedID:19529817) AT2G36590,AT1G65870,AT3G28220 RAFFAELE_EXP.1_90-105MN_WT/T0-TIMEPOINT_UP Significantly induced-regulated in 90-105mn / Exp.1 upon inoculated wild-type plants compared to the T0 timepoint (Table S1 PubmedID:18326828) AT1G01120,AT1G01610,AT1G02360,AT1G04770,AT1G05340,AT1G07160,AT1G07720,AT1G09080,AT1G09560,AT1G11100,AT1G14540,AT1G17420,AT1G18890,AT1G19180,AT1G19450,AT1G19670,AT1G22410,AT1G23850,AT1G25400,AT1G27730,AT1G27950,AT1G28010,AT1G28600,AT1G30370,AT1G30700,AT1G35140,AT1G35180,AT1G48320,AT1G48860,AT1G51820,AT1G51890,AT1G51920,AT1G55210,AT1G55910,AT1G56060,AT1G57630,AT1G59590,AT1G59910,AT1G64400,AT1G65980,AT1G67730,AT1G72520,AT1G73010,AT1G74020,AT1G74710,AT1G76600,AT1G78000,AT1G80820,AT2G02010,AT2G16900,AT2G17500,AT2G18690,AT2G19190,AT2G22860,AT2G24570,AT2G24850,AT2G26250,AT2G26440,AT2G27660,AT2G28890,AT2G28930,AT2G29460,AT2G30550,AT2G31570,AT2G37040,AT2G37430,AT2G38530,AT2G42360,AT2G43290,AT2G46400,AT3G01720,AT3G02840,AT3G03520,AT3G03990,AT3G13310,AT3G13520,AT3G13950,AT3G15210,AT3G16470,AT3G18830,AT3G21230,AT3G23250,AT3G25760,AT3G25780,AT3G26830,AT3G29810,AT3G44260,AT3G44590,AT3G45060,AT3G45140,AT3G47540,AT3G48565,AT3G49780,AT3G51450,AT3G52190,AT3G53260,AT3G55150,AT3G55360,AT3G55470,AT3G55840,AT3G56880,AT3G57450,AT3G57460,AT3G59700,AT3G61190,AT3G62150,AT3G63010,AT4G00360,AT4G01250,AT4G03400,AT4G03450,AT4G04490,AT4G08850,AT4G08870,AT4G08950,AT4G14440,AT4G20460,AT4G21390,AT4G21850,AT4G21990,AT4G22470,AT4G23150,AT4G24510,AT4G24570,AT4G25030,AT4G25830,AT4G28400,AT4G30190,AT4G30210,AT4G30280,AT4G30470,AT4G31550,AT4G34590,AT4G35180,AT4G35320,AT4G36500,AT4G37640,AT4G39330,AT4G39670,AT5G02490,AT5G03610,AT5G05190,AT5G09440,AT5G10380,AT5G10480,AT5G11920,AT5G12420,AT5G13490,AT5G13550,AT5G17630,AT5G20150,AT5G24760,AT5G26220,AT5G39670,AT5G40760,AT5G43170,AT5G43760,AT5G45380,AT5G47330,AT5G48850,AT5G49520,AT5G52060,AT5G52760,AT5G52810,AT5G53110,AT5G54160,AT5G54490,AT5G55620,AT5G57560,AT5G57800,AT5G58150,AT5G59820,AT5G60950,AT5G65280,AT5G67300,AT5G67340 RAFFAELE_EXP.1_2-4H_WT/T0-TIMEPOINT_UP Significantly induced-regulated in 2-4h / Exp.1 upon inoculated wild-type plants compared to the T0 timepoint (Table S1 PubmedID:18326828) AT1G02360,AT1G02450,AT1G04770,AT1G05340,AT1G06000,AT1G07130,AT1G07160,AT1G09080,AT1G09560,AT1G09940,AT1G11100,AT1G13340,AT1G13470,AT1G14540,AT1G14870,AT1G15520,AT1G17420,AT1G18890,AT1G19180,AT1G19250,AT1G19450,AT1G22410,AT1G23850,AT1G25400,AT1G26380,AT1G27130,AT1G27730,AT1G28010,AT1G28480,AT1G28600,AT1G30370,AT1G30700,AT1G32940,AT1G32960,AT1G33390,AT1G35140,AT1G43910,AT1G48320,AT1G48860,AT1G51820,AT1G51890,AT1G51920,AT1G55210,AT1G55910,AT1G56060,AT1G57630,AT1G59590,AT1G59910,AT1G61800,AT1G64170,AT1G64400,AT1G65690,AT1G65980,AT1G68620,AT1G69930,AT1G72520,AT1G73805,AT1G74020,AT1G74100,AT1G74710,AT1G76360,AT1G76600,AT1G77840,AT1G78000,AT1G79680,AT1G80820,AT2G02010,AT2G04400,AT2G12290,AT2G15480,AT2G16900,AT2G17500,AT2G18690,AT2G19190,AT2G21520,AT2G22500,AT2G22860,AT2G24850,AT2G26440,AT2G27660,AT2G28890,AT2G28930,AT2G29460,AT2G30550,AT2G30770,AT2G31570,AT2G34500,AT2G37040,AT2G37430,AT2G37940,AT2G38530,AT2G38860,AT2G39360,AT2G40750,AT2G41380,AT2G42360,AT2G43290,AT2G43320,AT2G43570,AT2G46400,AT3G01720,AT3G02040,AT3G02840,AT3G03520,AT3G03990,AT3G04070,AT3G04090,AT3G04640,AT3G05200,AT3G09010,AT3G09410,AT3G10500,AT3G13310,AT3G13950,AT3G15210,AT3G16860,AT3G18250,AT3G18690,AT3G18830,AT3G19030,AT3G21230,AT3G22160,AT3G22600,AT3G23250,AT3G25610,AT3G25760,AT3G25780,AT3G26830,AT3G29810,AT3G44260,AT3G45060,AT3G45970,AT3G46620,AT3G47480,AT3G47540,AT3G47780,AT3G48565,AT3G49780,AT3G50900,AT3G51450,AT3G52190,AT3G52430,AT3G53260,AT3G54150,AT3G55150,AT3G55470,AT3G55840,AT3G56880,AT3G57450,AT3G57460,AT3G59700,AT3G61190,AT3G62150,AT3G63010,AT4G00240,AT4G00360,AT4G01250,AT4G03320,AT4G03400,AT4G03450,AT4G04490,AT4G08850,AT4G08950,AT4G11170,AT4G12070,AT4G16260,AT4G20110,AT4G20460,AT4G21390,AT4G21830,AT4G21850,AT4G21865,AT4G21990,AT4G22470,AT4G23150,AT4G23210,AT4G24570,AT4G25030,AT4G25830,AT4G26910,AT4G27260,AT4G28400,AT4G30190,AT4G30210,AT4G30280,AT4G31500,AT4G31550,AT4G34138,AT4G34590,AT4G35180,AT4G36220,AT4G36500,AT4G37370,AT4G37640,AT4G38620,AT4G39030,AT4G39390,AT4G39670,AT4G39980,AT5G02490,AT5G03610,AT5G05190,AT5G08240,AT5G09440,AT5G10380,AT5G10750,AT5G10760,AT5G11210,AT5G11670,AT5G11920,AT5G12420,AT5G13490,AT5G13550,AT5G18470,AT5G22770,AT5G24760,AT5G25260,AT5G26220,AT5G35735,AT5G37740,AT5G38710,AT5G38900,AT5G39670,AT5G40760,AT5G43170,AT5G44390,AT5G45380,AT5G46230,AT5G47330,AT5G47730,AT5G48850,AT5G49520,AT5G52060,AT5G52760,AT5G52810,AT5G53110,AT5G54160,AT5G54490,AT5G57560,AT5G58150,AT5G59550,AT5G59820,AT5G60860,AT5G60950,AT5G67300,AT5G67340 RAFFAELE_EXP.1_6H_WT/T0-TIMEPOINT_UP Significantly induced-regulated in 6h / Exp. 1 upon inoculated wild-type plants compared to the T0 timepoint (Table S1 PubmedID:18326828) AT1G02360,AT1G02450,AT1G03040,AT1G04770,AT1G05340,AT1G06000,AT1G07130,AT1G07160,AT1G09080,AT1G09560,AT1G09940,AT1G11100,AT1G13340,AT1G13470,AT1G14540,AT1G14870,AT1G15520,AT1G18890,AT1G19180,AT1G19250,AT1G22410,AT1G23850,AT1G25400,AT1G26380,AT1G27130,AT1G27730,AT1G28480,AT1G28600,AT1G30370,AT1G30700,AT1G32210,AT1G32940,AT1G32960,AT1G33390,AT1G35140,AT1G43910,AT1G48320,AT1G48860,AT1G51820,AT1G51890,AT1G51920,AT1G55210,AT1G55910,AT1G56060,AT1G57630,AT1G59590,AT1G59910,AT1G61800,AT1G64170,AT1G64400,AT1G65690,AT1G65980,AT1G67800,AT1G68620,AT1G69930,AT1G72520,AT1G73010,AT1G73805,AT1G74020,AT1G74100,AT1G74710,AT1G75040,AT1G76360,AT1G76600,AT1G77370,AT1G77840,AT1G78000,AT1G78210,AT1G79680,AT1G80820,AT2G02010,AT2G04400,AT2G06050,AT2G12290,AT2G15480,AT2G16900,AT2G17500,AT2G18690,AT2G19190,AT2G21520,AT2G22500,AT2G22860,AT2G24850,AT2G26440,AT2G27660,AT2G28890,AT2G29460,AT2G30550,AT2G30770,AT2G31570,AT2G34500,AT2G37040,AT2G37430,AT2G37940,AT2G38860,AT2G38940,AT2G39360,AT2G40750,AT2G41380,AT2G42360,AT2G43290,AT2G43320,AT2G43570,AT2G46400,AT3G01720,AT3G02040,AT3G02840,AT3G03310,AT3G03520,AT3G04070,AT3G04090,AT3G04640,AT3G05200,AT3G07390,AT3G09010,AT3G09410,AT3G10500,AT3G13310,AT3G13330,AT3G13520,AT3G13950,AT3G16860,AT3G17790,AT3G18250,AT3G18690,AT3G18830,AT3G19030,AT3G21230,AT3G22160,AT3G22600,AT3G23250,AT3G24503,AT3G25610,AT3G25760,AT3G25780,AT3G25890,AT3G26830,AT3G29810,AT3G44260,AT3G44590,AT3G45970,AT3G46620,AT3G47480,AT3G47540,AT3G47780,AT3G48565,AT3G49780,AT3G51450,AT3G52190,AT3G52430,AT3G53260,AT3G54150,AT3G55150,AT3G55470,AT3G55840,AT3G57450,AT3G57460,AT3G59700,AT3G61190,AT3G62150,AT3G63010,AT4G00240,AT4G01250,AT4G03320,AT4G03450,AT4G04490,AT4G04910,AT4G08850,AT4G08950,AT4G11170,AT4G12070,AT4G14800,AT4G16260,AT4G20110,AT4G21390,AT4G21830,AT4G21850,AT4G21865,AT4G21990,AT4G22470,AT4G22780,AT4G23150,AT4G23210,AT4G24400,AT4G24570,AT4G25030,AT4G25900,AT4G26910,AT4G27260,AT4G27500,AT4G28400,AT4G29040,AT4G30190,AT4G30210,AT4G30280,AT4G31500,AT4G31550,AT4G34138,AT4G34200,AT4G34590,AT4G35180,AT4G36500,AT4G37370,AT4G37640,AT4G39030,AT4G39390,AT4G39670,AT4G39980,AT5G02490,AT5G03610,AT5G05190,AT5G06750,AT5G08240,AT5G10380,AT5G10750,AT5G10760,AT5G11210,AT5G11670,AT5G11920,AT5G13490,AT5G13550,AT5G15640,AT5G17990,AT5G18470,AT5G18750,AT5G20150,AT5G22630,AT5G22770,AT5G24760,AT5G25260,AT5G26220,AT5G33290,AT5G35735,AT5G37740,AT5G38710,AT5G38900,AT5G39670,AT5G40760,AT5G43170,AT5G44390,AT5G45380,AT5G46230,AT5G47730,AT5G48850,AT5G49520,AT5G52760,AT5G52810,AT5G53110,AT5G54160,AT5G54490,AT5G57560,AT5G59550,AT5G59820,AT5G60950,AT5G63680,AT5G67340,ATMG00650,ATMG01200 RAFFAELE_EXP.2_90-105MN_WT/T0-TIMEPOINT_UP Significantly induced-regulated in 90-105mn / Exp.2 upon inoculated wild-type plants compared to the T0 timepoint (Table S1 PubmedID:18326828) AT1G01120,AT1G01610,AT1G02360,AT1G02450,AT1G04770,AT1G05340,AT1G06000,AT1G07130,AT1G07160,AT1G07720,AT1G09080,AT1G09560,AT1G09940,AT1G13340,AT1G17420,AT1G18890,AT1G19180,AT1G19450,AT1G19670,AT1G22410,AT1G23850,AT1G25400,AT1G26380,AT1G27730,AT1G27950,AT1G28010,AT1G28480,AT1G28600,AT1G30370,AT1G30700,AT1G32940,AT1G33390,AT1G35140,AT1G35180,AT1G48860,AT1G51820,AT1G51890,AT1G51920,AT1G55210,AT1G55910,AT1G56060,AT1G57630,AT1G59910,AT1G61800,AT1G64170,AT1G64400,AT1G65980,AT1G67730,AT1G68620,AT1G72520,AT1G73010,AT1G74020,AT1G76360,AT1G76600,AT1G77840,AT1G78000,AT1G78210,AT1G80820,AT2G02010,AT2G04400,AT2G06050,AT2G12290,AT2G16900,AT2G18690,AT2G19190,AT2G22500,AT2G22860,AT2G24570,AT2G24850,AT2G26250,AT2G26440,AT2G27660,AT2G28890,AT2G28930,AT2G29460,AT2G31570,AT2G37040,AT2G37430,AT2G38530,AT2G38860,AT2G38940,AT2G41380,AT2G42360,AT2G43290,AT2G43570,AT2G46400,AT3G01720,AT3G02040,AT3G02840,AT3G03310,AT3G03520,AT3G03990,AT3G04070,AT3G04640,AT3G05200,AT3G07390,AT3G13520,AT3G13950,AT3G15210,AT3G16470,AT3G16860,AT3G17790,AT3G18690,AT3G18830,AT3G19030,AT3G21230,AT3G22160,AT3G23250,AT3G25760,AT3G25780,AT3G25890,AT3G29810,AT3G44260,AT3G44590,AT3G45060,AT3G45140,AT3G45970,AT3G46620,AT3G48565,AT3G49780,AT3G50900,AT3G51450,AT3G52190,AT3G53260,AT3G55150,AT3G55360,AT3G55470,AT3G55840,AT3G56880,AT3G57450,AT3G57460,AT3G59700,AT3G61190,AT3G63010,AT4G00360,AT4G01250,AT4G03400,AT4G03450,AT4G04490,AT4G08850,AT4G08870,AT4G08950,AT4G12070,AT4G14440,AT4G20460,AT4G21390,AT4G21990,AT4G22470,AT4G23150,AT4G23210,AT4G24510,AT4G24570,AT4G25030,AT4G25830,AT4G26910,AT4G27260,AT4G27500,AT4G28400,AT4G30190,AT4G30210,AT4G30280,AT4G30470,AT4G31500,AT4G31550,AT4G34138,AT4G34590,AT4G35180,AT4G35320,AT4G36220,AT4G36500,AT4G37370,AT4G37640,AT4G38620,AT4G39330,AT4G39670,AT4G39980,AT5G02490,AT5G05190,AT5G09440,AT5G10380,AT5G10480,AT5G10750,AT5G10760,AT5G11670,AT5G12420,AT5G13490,AT5G13550,AT5G17630,AT5G20150,AT5G22630,AT5G24760,AT5G26220,AT5G35735,AT5G37740,AT5G39670,AT5G40760,AT5G43760,AT5G44390,AT5G47330,AT5G48850,AT5G49520,AT5G52060,AT5G52760,AT5G52810,AT5G54160,AT5G54490,AT5G55620,AT5G57560,AT5G57800,AT5G58150,AT5G59550,AT5G59820,AT5G60860,AT5G60950,AT5G65280,AT5G67300,AT5G67340 RAFFAELE_EXP.2_2-4H_WT/T0-TIMEPOINT_UP Significantly induced-regulated in 2-4h / Exp. 2 upon inoculated wild-type plants compared to the T0 timepoint (Table S1 PubmedID:18326828) AT1G02360,AT1G02450,AT1G03040,AT1G04770,AT1G05340,AT1G06000,AT1G07130,AT1G09080,AT1G09560,AT1G09940,AT1G11100,AT1G13340,AT1G13470,AT1G14540,AT1G14870,AT1G15520,AT1G18890,AT1G19180,AT1G19250,AT1G19670,AT1G22410,AT1G23850,AT1G25400,AT1G26380,AT1G27130,AT1G27730,AT1G27950,AT1G28010,AT1G28480,AT1G28600,AT1G30370,AT1G30700,AT1G32210,AT1G32940,AT1G32960,AT1G33390,AT1G35140,AT1G43910,AT1G48320,AT1G48860,AT1G51820,AT1G51890,AT1G51920,AT1G55210,AT1G55910,AT1G56060,AT1G57630,AT1G59590,AT1G59910,AT1G61800,AT1G64170,AT1G64400,AT1G65690,AT1G65980,AT1G67800,AT1G68620,AT1G69930,AT1G72520,AT1G73010,AT1G73805,AT1G74020,AT1G74100,AT1G74710,AT1G75040,AT1G76360,AT1G76600,AT1G77370,AT1G77840,AT1G78000,AT1G78210,AT1G79680,AT1G80820,AT2G02010,AT2G04400,AT2G06050,AT2G12290,AT2G15480,AT2G16900,AT2G17500,AT2G18690,AT2G19190,AT2G21520,AT2G22500,AT2G22860,AT2G24570,AT2G24850,AT2G26440,AT2G27660,AT2G28890,AT2G29460,AT2G30550,AT2G30770,AT2G34500,AT2G37040,AT2G37430,AT2G37940,AT2G38530,AT2G38860,AT2G38940,AT2G39360,AT2G40750,AT2G41380,AT2G42360,AT2G43290,AT2G43320,AT2G43570,AT2G46400,AT3G01720,AT3G02040,AT3G02840,AT3G03310,AT3G03520,AT3G03990,AT3G04070,AT3G04090,AT3G04640,AT3G05200,AT3G07390,AT3G09010,AT3G09410,AT3G10500,AT3G13310,AT3G13330,AT3G13950,AT3G15210,AT3G16860,AT3G17790,AT3G18250,AT3G18830,AT3G21230,AT3G22160,AT3G22600,AT3G23250,AT3G24503,AT3G25610,AT3G25760,AT3G25780,AT3G26830,AT3G29810,AT3G44260,AT3G44590,AT3G45060,AT3G45970,AT3G46620,AT3G47480,AT3G47540,AT3G47780,AT3G48565,AT3G49780,AT3G50900,AT3G51450,AT3G52430,AT3G53260,AT3G54150,AT3G55150,AT3G55360,AT3G55470,AT3G55840,AT3G56880,AT3G57450,AT3G57460,AT3G59700,AT3G61190,AT3G62150,AT3G63010,AT4G00240,AT4G01250,AT4G03320,AT4G03400,AT4G03450,AT4G04490,AT4G04910,AT4G08850,AT4G08950,AT4G11170,AT4G12070,AT4G14440,AT4G14800,AT4G16260,AT4G20110,AT4G20460,AT4G21390,AT4G21830,AT4G21850,AT4G21865,AT4G21990,AT4G22470,AT4G22780,AT4G23150,AT4G23210,AT4G24400,AT4G24570,AT4G25030,AT4G25900,AT4G26910,AT4G27260,AT4G27500,AT4G28400,AT4G29040,AT4G30190,AT4G30280,AT4G31500,AT4G31550,AT4G34138,AT4G34200,AT4G34590,AT4G35180,AT4G36220,AT4G36500,AT4G37370,AT4G37640,AT4G38620,AT4G39030,AT4G39390,AT4G39670,AT4G39980,AT5G02490,AT5G03610,AT5G05190,AT5G06750,AT5G08240,AT5G09440,AT5G10380,AT5G10750,AT5G10760,AT5G11210,AT5G11670,AT5G11920,AT5G12420,AT5G13490,AT5G13550,AT5G15640,AT5G17990,AT5G18470,AT5G18750,AT5G20150,AT5G22630,AT5G22770,AT5G24760,AT5G25260,AT5G26220,AT5G33290,AT5G35735,AT5G37740,AT5G38710,AT5G38900,AT5G39670,AT5G40760,AT5G43170,AT5G43760,AT5G44390,AT5G45380,AT5G46230,AT5G47330,AT5G47730,AT5G48850,AT5G49520,AT5G52760,AT5G52810,AT5G53110,AT5G54160,AT5G54490,AT5G55620,AT5G57560,AT5G58150,AT5G59550,AT5G59820,AT5G60950,AT5G63680,AT5G67340,ATMG00650,ATMG01200 RAFFAELE_EXP.1_90-105MN_MYB30OX/WT_UP Significantly induced-regulated in 90-105mn / Exp.1 upon inoculated MYB30ox compared to inoculated wild-type (Table S1 PubmedID:18326828) AT1G01120,AT1G07130,AT1G07160,AT1G09560,AT1G11100,AT1G19180,AT1G19450,AT1G25400,AT1G27130,AT1G27730,AT1G28600,AT1G30700,AT1G35140,AT1G35180,AT1G48320,AT1G51820,AT1G55910,AT1G59910,AT1G64400,AT1G65980,AT1G72520,AT1G74020,AT1G76360,AT1G78000,AT1G78210,AT2G19190,AT2G21520,AT2G22500,AT2G22860,AT2G24570,AT2G27660,AT2G28890,AT2G28930,AT2G37040,AT2G37430,AT2G39360,AT2G42360,AT2G43290,AT3G02040,AT3G03520,AT3G04090,AT3G04640,AT3G05200,AT3G10500,AT3G13520,AT3G15210,AT3G16470,AT3G18690,AT3G18830,AT3G19030,AT3G23250,AT3G29810,AT3G44260,AT3G45060,AT3G45970,AT3G46620,AT3G47540,AT3G48565,AT3G50900,AT3G53260,AT3G55150,AT3G55470,AT3G56880,AT3G57450,AT4G01250,AT4G03400,AT4G08850,AT4G08870,AT4G08950,AT4G14440,AT4G21390,AT4G22470,AT4G24510,AT4G24570,AT4G25030,AT4G25830,AT4G27260,AT4G28400,AT4G30210,AT4G30280,AT4G30470,AT4G31550,AT4G34590,AT4G35320,AT4G36500,AT4G38620,AT4G39980,AT5G05190,AT5G09440,AT5G10380,AT5G10750,AT5G20150,AT5G22630,AT5G24760,AT5G26220,AT5G35735,AT5G43170,AT5G43760,AT5G44390,AT5G48850,AT5G49520,AT5G52060,AT5G52810,AT5G54160,AT5G54490,AT5G55620,AT5G57560,AT5G57800,AT5G58150,AT5G59550,AT5G59820,AT5G60860,AT5G67300 RAFFAELE_EXP.1_2-4H_MYB30OX/WT_UP Significantly induced-regulated in 2-4h / Exp. 1 upon inoculated MYB30ox compared to inoculated wild-type (Table S1 PubmedID:18326828) AT1G01120,AT1G02450,AT1G04770,AT1G05340,AT1G09080,AT1G09940,AT1G13340,AT1G13470,AT1G14540,AT1G14870,AT1G15520,AT1G18890,AT1G19250,AT1G22410,AT1G26380,AT1G28480,AT1G30370,AT1G32940,AT1G32960,AT1G43910,AT1G48320,AT1G48860,AT1G51920,AT1G56060,AT1G57630,AT1G61800,AT1G64400,AT1G67800,AT1G69930,AT1G72520,AT1G73805,AT1G74100,AT1G74710,AT1G75040,AT1G76360,AT1G76600,AT1G77840,AT1G78210,AT1G79680,AT1G80820,AT2G02010,AT2G04400,AT2G06050,AT2G15480,AT2G16900,AT2G17500,AT2G18690,AT2G22500,AT2G24850,AT2G29460,AT2G30770,AT2G34500,AT2G37940,AT2G38530,AT2G38860,AT2G40750,AT2G41380,AT2G43290,AT2G43320,AT2G43570,AT2G46400,AT3G02840,AT3G03990,AT3G04090,AT3G04640,AT3G07390,AT3G09010,AT3G09410,AT3G10500,AT3G16860,AT3G18250,AT3G21230,AT3G22600,AT3G24503,AT3G25610,AT3G25780,AT3G26830,AT3G45140,AT3G47480,AT3G47540,AT3G47780,AT3G51450,AT3G52430,AT3G54150,AT3G55470,AT3G55840,AT3G59700,AT3G61190,AT3G62150,AT4G03450,AT4G04490,AT4G08870,AT4G11170,AT4G12070,AT4G14440,AT4G21830,AT4G21850,AT4G21865,AT4G21990,AT4G22780,AT4G23150,AT4G23210,AT4G24400,AT4G24510,AT4G25030,AT4G25900,AT4G26910,AT4G28400,AT4G30470,AT4G31500,AT4G34590,AT4G35180,AT4G35320,AT4G37370,AT4G37640,AT4G39030,AT4G39330,AT4G39670,AT4G39980,AT5G02490,AT5G03610,AT5G08240,AT5G09440,AT5G10380,AT5G10760,AT5G11210,AT5G11670,AT5G13490,AT5G15640,AT5G17990,AT5G18470,AT5G20150,AT5G22630,AT5G25260,AT5G26220,AT5G35735,AT5G38710,AT5G38900,AT5G39670,AT5G40760,AT5G43760,AT5G47730,AT5G48850,AT5G52760,AT5G52810,AT5G54490,AT5G55620,AT5G57800,AT5G59820,AT5G67340 RAFFAELE_EXP.1_6H_MYB30OX/WT_UP Significantly induced-regulated in 6h / Exp. 1 upon inoculated MYB30ox compared to inoculated wild-type (Table S1 PubmedID:18326828) AT1G01120,AT1G01610,AT1G02360,AT1G02450,AT1G03040,AT1G04770,AT1G06000,AT1G07720,AT1G09080,AT1G09560,AT1G11100,AT1G13470,AT1G14870,AT1G15520,AT1G17420,AT1G19250,AT1G19670,AT1G23850,AT1G27950,AT1G28010,AT1G28480,AT1G32210,AT1G32960,AT1G33390,AT1G35180,AT1G43910,AT1G48320,AT1G51890,AT1G55210,AT1G55910,AT1G59590,AT1G61800,AT1G64170,AT1G64400,AT1G65690,AT1G67730,AT1G68620,AT1G73010,AT1G73805,AT1G74020,AT1G75040,AT1G77370,AT1G78000,AT1G78210,AT2G04400,AT2G06050,AT2G12290,AT2G17500,AT2G21520,AT2G24850,AT2G26250,AT2G26440,AT2G28890,AT2G28930,AT2G30550,AT2G30770,AT2G31570,AT2G38940,AT2G41380,AT2G43570,AT3G01720,AT3G02040,AT3G03310,AT3G03990,AT3G04070,AT3G04090,AT3G07390,AT3G10500,AT3G13310,AT3G13330,AT3G13950,AT3G16470,AT3G17790,AT3G18250,AT3G22160,AT3G24503,AT3G25760,AT3G25890,AT3G44590,AT3G45140,AT3G47480,AT3G47540,AT3G49780,AT3G50900,AT3G51450,AT3G52190,AT3G53260,AT3G55360,AT3G55470,AT3G57460,AT3G63010,AT4G00240,AT4G00360,AT4G03320,AT4G03400,AT4G03450,AT4G04910,AT4G08870,AT4G14440,AT4G14800,AT4G16260,AT4G20110,AT4G20460,AT4G21830,AT4G21850,AT4G24510,AT4G25830,AT4G27500,AT4G28400,AT4G29040,AT4G30190,AT4G30470,AT4G34138,AT4G34200,AT4G34590,AT4G36220,AT4G38620,AT4G39330,AT4G39390,AT5G06750,AT5G09440,AT5G10480,AT5G10760,AT5G11920,AT5G12420,AT5G13550,AT5G17630,AT5G17990,AT5G18750,AT5G20150,AT5G22770,AT5G26220,AT5G33290,AT5G37740,AT5G38710,AT5G43760,AT5G45380,AT5G46230,AT5G47330,AT5G52810,AT5G53110,AT5G55620,AT5G57800,AT5G60950,AT5G63680,AT5G65280,AT5G67340,ATMG00650,ATMG01200 RAFFAELE_EXP.2_90-105MN_MYB30OX/WT_UP Significantly induced-regulated in 90-105mn / Exp.2 upon inoculated MYB30ox compared to inoculated wild-type (Table S1 PubmedID:18326828) AT1G01120,AT1G02450,AT1G03040,AT1G04770,AT1G05340,AT1G06000,AT1G07130,AT1G07720,AT1G09560,AT1G09940,AT1G11100,AT1G13340,AT1G13470,AT1G14540,AT1G14870,AT1G18890,AT1G19180,AT1G19670,AT1G22410,AT1G23850,AT1G25400,AT1G26380,AT1G27130,AT1G27730,AT1G28600,AT1G30700,AT1G32940,AT1G33390,AT1G35140,AT1G43910,AT1G48320,AT1G48860,AT1G51890,AT1G55910,AT1G56060,AT1G57630,AT1G61800,AT1G64170,AT1G64400,AT1G65690,AT1G65980,AT1G67800,AT1G68620,AT1G72520,AT1G73805,AT1G74020,AT1G74100,AT1G74710,AT1G76360,AT1G77370,AT1G77840,AT1G78000,AT1G78210,AT1G80820,AT2G02010,AT2G04400,AT2G06050,AT2G12290,AT2G15480,AT2G16900,AT2G17500,AT2G18690,AT2G19190,AT2G21520,AT2G22860,AT2G24850,AT2G26440,AT2G27660,AT2G28890,AT2G28930,AT2G29460,AT2G30550,AT2G30770,AT2G34500,AT2G37040,AT2G37430,AT2G37940,AT2G38860,AT2G39360,AT2G40750,AT2G41380,AT2G42360,AT2G43290,AT2G43320,AT2G43570,AT2G46400,AT3G01720,AT3G03520,AT3G04070,AT3G04090,AT3G04640,AT3G05200,AT3G07390,AT3G09010,AT3G09410,AT3G10500,AT3G13330,AT3G13950,AT3G16470,AT3G16860,AT3G17790,AT3G18250,AT3G18830,AT3G21230,AT3G22600,AT3G23250,AT3G25610,AT3G25760,AT3G25780,AT3G26830,AT3G29810,AT3G45060,AT3G45140,AT3G45970,AT3G47480,AT3G47540,AT3G47780,AT3G48565,AT3G49780,AT3G50900,AT3G51450,AT3G52430,AT3G53260,AT3G54150,AT3G55470,AT3G57450,AT3G57460,AT3G59700,AT3G61190,AT3G62150,AT4G00240,AT4G03320,AT4G03400,AT4G03450,AT4G04490,AT4G04910,AT4G08870,AT4G08950,AT4G11170,AT4G12070,AT4G14800,AT4G16260,AT4G20110,AT4G20460,AT4G21390,AT4G21830,AT4G21850,AT4G21865,AT4G21990,AT4G22470,AT4G22780,AT4G23150,AT4G23210,AT4G24400,AT4G24510,AT4G25030,AT4G25900,AT4G26910,AT4G27260,AT4G27500,AT4G28400,AT4G29040,AT4G30190,AT4G30210,AT4G30280,AT4G30470,AT4G31500,AT4G34200,AT4G34590,AT4G35180,AT4G35320,AT4G36220,AT4G37370,AT4G37640,AT4G38620,AT4G39030,AT4G39390,AT4G39670,AT4G39980,AT5G02490,AT5G03610,AT5G06750,AT5G08240,AT5G09440,AT5G10380,AT5G10760,AT5G11670,AT5G11920,AT5G12420,AT5G13490,AT5G13550,AT5G15640,AT5G17990,AT5G18470,AT5G18750,AT5G22630,AT5G22770,AT5G24760,AT5G25260,AT5G26220,AT5G33290,AT5G35735,AT5G37740,AT5G38710,AT5G38900,AT5G39670,AT5G40760,AT5G43170,AT5G43760,AT5G45380,AT5G46230,AT5G47330,AT5G47730,AT5G48850,AT5G49520,AT5G52760,AT5G52810,AT5G53110,AT5G54160,AT5G54490,AT5G55620,AT5G57560,AT5G57800,AT5G59820,AT5G60860,AT5G60950,AT5G65280,AT5G67300,AT5G67340,ATMG00650,ATMG01200 RAFFAELE_EXP.2_2-4H_MYB30OX/WT_UP Significantly induced-regulated in 2-4h / Exp. 2 upon inoculated MYB30ox compared to inoculated wild-type (Table S1 PubmedID:18326828) AT1G01120,AT1G01610,AT1G02360,AT1G02450,AT1G06000,AT1G07160,AT1G07720,AT1G09080,AT1G09560,AT1G14540,AT1G14870,AT1G15520,AT1G17420,AT1G18890,AT1G19180,AT1G19250,AT1G19450,AT1G19670,AT1G25400,AT1G26380,AT1G27730,AT1G27950,AT1G28010,AT1G28480,AT1G30370,AT1G30700,AT1G32210,AT1G32960,AT1G35140,AT1G35180,AT1G51820,AT1G51890,AT1G51920,AT1G55210,AT1G59590,AT1G59910,AT1G61800,AT1G64170,AT1G64400,AT1G65690,AT1G67730,AT1G68620,AT1G69930,AT1G72520,AT1G73010,AT1G74020,AT1G75040,AT1G76600,AT1G78000,AT1G78210,AT1G79680,AT1G80820,AT2G02010,AT2G04400,AT2G16900,AT2G22500,AT2G22860,AT2G24570,AT2G24850,AT2G26250,AT2G27660,AT2G28890,AT2G28930,AT2G29460,AT2G30550,AT2G30770,AT2G31570,AT2G37040,AT2G37430,AT2G38530,AT2G38940,AT2G39360,AT2G40750,AT2G41380,AT2G42360,AT2G43290,AT2G43570,AT3G02040,AT3G02840,AT3G03310,AT3G03990,AT3G04070,AT3G04090,AT3G04640,AT3G07390,AT3G09010,AT3G13310,AT3G13520,AT3G15210,AT3G18250,AT3G18690,AT3G18830,AT3G19030,AT3G21230,AT3G22160,AT3G22600,AT3G23250,AT3G24503,AT3G25780,AT3G25890,AT3G26830,AT3G44260,AT3G44590,AT3G45060,AT3G45970,AT3G46620,AT3G47540,AT3G48565,AT3G49780,AT3G50900,AT3G51450,AT3G52190,AT3G53260,AT3G55150,AT3G55360,AT3G55470,AT3G55840,AT3G56880,AT3G57450,AT3G59700,AT3G63010,AT4G00360,AT4G01250,AT4G08850,AT4G08870,AT4G14440,AT4G16260,AT4G20460,AT4G21390,AT4G21830,AT4G21850,AT4G21865,AT4G22470,AT4G24400,AT4G24510,AT4G24570,AT4G25030,AT4G25830,AT4G25900,AT4G30190,AT4G30470,AT4G31550,AT4G34138,AT4G34200,AT4G34590,AT4G35180,AT4G35320,AT4G36220,AT4G36500,AT4G38620,AT4G39330,AT5G03610,AT5G05190,AT5G06750,AT5G09440,AT5G10480,AT5G10750,AT5G10760,AT5G11210,AT5G11670,AT5G12420,AT5G13490,AT5G17630,AT5G18750,AT5G20150,AT5G24760,AT5G33290,AT5G37740,AT5G38710,AT5G38900,AT5G43170,AT5G43760,AT5G44390,AT5G47330,AT5G47730,AT5G49520,AT5G52060,AT5G52810,AT5G53110,AT5G54160,AT5G54490,AT5G57560,AT5G57800,AT5G58150,AT5G59550,AT5G59820,AT5G60860,AT5G63680,ATMG01200 RAFFAELE_WT-INDUCED_MYB30OX/WT-UP_MYB30AS/WT_DN Induced in the wild-type, up-regulated in MYB30ox compared to wild-type, and repressed in MYB30as compared to wild-type (upon inoculation with Xcc147) (Table S2 PubmedID:18326828) AT1G01120,AT1G01610,AT1G07720,AT1G27950,AT1G67730,AT2G26250,AT2G38530,AT3G55360,AT4G00360,AT4G14440,AT4G24510,AT5G47330,AT5G57800,AT1G19450,AT4G03400,AT4G25830,AT4G39330,AT5G10480,AT5G17630,AT5G52060,AT5G60860,AT1G35180,AT4G35320,AT5G55620 SENA_COLUMELLA_5/0HRS_UP Induced columella markers at regeneration 5 hrs compared to regeneration 0 hrs (Table S2 PubmedID:19182776) AT4G17490,AT4G15530,AT5G20270,AT5G33290,AT5G57710,AT5G47050,AT5G02020,AT3G53720,AT3G45010,AT4G37940,AT4G35985,AT4G11350,AT2G40470,AT2G34140,AT1G62840,AT3G18490,AT1G74310,AT1G17180,AT1G24090,AT2G30140,AT2G30550 SENA_COLUMELLA_13/0HRS_M_UP Induced columella markers at regeneration 13 hrs compared to regeneration 0 hrs (Table S2 PubmedID:19182776) AT4G16260,AT5G57660,AT5G06330,AT4G25835,AT3G11660,AT1G28130,AT1G21340,AT1G62290,AT1G22880,AT2G16700,AT2G41290 SENA_COLUMELLA_22/0HRS_M_UP Induced columella markers at regeneration 22 hrs compared to regeneration 0 hrs (Table S2 PubmedID:19182776) AT5G60630,AT5G39820,AT5G04970,AT5G02070,AT4G35720,AT4G34970,AT4G26700,AT4G25300,AT4G13210,AT4G09020,AT4G01750,AT3G52180,AT1G62840,AT3G23400,AT3G01690,AT1G72490,AT1G48070,AT1G54290,AT1G09530,AT1G23160,AT1G23040,AT1G05010,AT2G46850 SENA_STARCH-METABOLISM-PATHWAY_REGENERATION-5HRS_UP Induced genes in the starch metabolism pathway at regeneration 5 hrs (Table S2 PubmedID:19182776) AT3G23920,AT1G23190,AT1G70730,AT5G48300 SENA_AUXIN_24HRS_UP Induced by auxin and induced in regenerating tissue within 24hrs (Table S2 PubmedID:19182776) AT4G17490,AT1G35140,AT4G36500,AT3G56880,AT5G65300,AT5G64260,AT5G59820,AT5G39580,AT5G12940,AT4G38580,AT4G38410,AT4G25810,AT4G08950,AT1G22030,AT3G10930,AT2G34140,AT3G10720,AT1G01470,AT2G47260,AT1G27730,AT2G28400,AT2G30140,AT4G15630,AT4G15620,AT5G45280,AT5G03670,AT3G25900,AT2G28350,AT2G39350,AT2G39700,AT4G30610,AT1G52200,AT1G30720 USADEL_KIN10_DN Down-regulated-KIN10 (Table S6 PubmedID:18305208) CPN60A,SVB,AT4G02940,CPHSC70-2EATSHOCKPROTEIN70-2,MMDH2,AT2G20450,AT1G64880,NPC6,AT3G15460,PRMT1A,QUL2,SUR1,AT4G10450,AT1G53645,ATG2,AT3G08680,RPL24A,NAS1,NRT1:2,AT4G29410,DBP1,REV,AT5G45280,FKBP53,TUA6,TIM8,EDA36,PPR596,PHB4,AT5G22440,PPC1,TUA4,AT3G23390,AT5G07090,FVE,AT5G16130,AT3G03060,AT3G10530,AT1G08580,AT1G69070,AT3G06530,AT4G22380,NOP56,AT5G11240,AT2G33845,AT5G16930,AT3G57630,AT3G15350,GR-RBP3,UNE5,STT3A,PDIL1-1,AT5G65860,AT4G39840,RPL16B,NRPC2,AT5G55915,AT5G60960,AT2G34350,DGL1,AT3G22230,AT5G06550,BGAL3,AT1G63810,MDAR6,AT2G40360,AT1G67120,MEE49,AT2G28600,AT4G26600,AT1G14710,AT4G26230,AT3G59670,PWP2,GLR3.4,AT3G23550,ARA4,AT1G72920,NRPA1,AT2G18400,ABCB1,AT4G34910,AT1G76400,CNGC12,AT3G56340,AT2G33370,AT1G71210,MLO8,AT1G29310,XGD1,MRP14,AT2G44120,SAD2,AT3G58660,RLP34,AT2G36970,AT4G25730,EDA25,SPP2,AT1G34020,PDIL1-3,AT5G61520,AT3G13690,PAB8,CRF3,GNL1,AT5G15550,AT4G27900,PIF3,AT3G26840,AT4G09420,MTA,AT3G07050,AT1G73180,AT5G41190,AT2G39530,ERO1,BGLU11,AT3G57380,AT5G09800,PDR9,HK1,TPS04,FRK1,BSMT1,BHLH093,NAP5,AT1G72090,RRP41,AT5G58620,MSRB9,AT1G04990,BCA5,DXPS1,RLP1,AT5G05340,SYTD,AT3G24954,RLP40,AGC2-1,SCPL48,AT5G06750,CLH1,CCR2,SUC1,AT4G13790,AT3G43270,AGP2,RHD2,RBP47A,QUA1,AT4G30800,AT1G26880,LTPG1,AT4G36660,AT3G23940,RPS6,AR192,AT5G64670,AT2G27775,AT5G59850,AT1G48570,AT4G10480,AT3G16080,AT5G60670,AT4G12600,AT3G06680,AT2G32060,AT3G13470,RPL3B,AT2G45710,AT4G05400,AT5G61170,AT1G20950,AT1G73940,GBF6,RPL27AB,HSP60,AT3G46540,BIP1,AT3G10610,CNX1,AT3G61820,AT2G42710,RPL23AB,AT3G06700,AT3G47370,AT1G71070,TIM10,RACK1C_AT,PYRB,AT4G25740,RACK1B_AT,TSBTYPE2,AT4G25890,AT5G05990,AT1G28395,YLMG1-1,CARB,AT3G05560,PUR5,NACA5,EDA9,HDT4,HDA3,AT3G44590,HSP60-2,SCA3,AT1G59990,AT1G77550,AT1G55210,AT2G14460,PDIL2-3,AT3G29360,AT4G31810,AT2G32220,BNS,AT5G65880,TIM13,RPS28,AT3G47960,ADK2,AT5G67510,FIB2,AT1G57660,AT4G16720,AT2G39795,AT3G60770,AT5G61570,SHD,RPS10,ATERDJ3B,HSP89.1,AT5G19750,AT4G38100,AT4G29520,AT4G15640,AT5G02050,DEGP10,BBC1,AT3G49220,AT1G30960,HD2B,AT1G34030,AT1G27400,CB5LP,AT4G15000,TIM50,AT1G07070,AT3G20240,AT3G16780,AT3G03920,AT2G37990,AT5G58420,AT3G54400,AT4G31790,AT5G18550,AT3G57490,RPS11-BETA,AT2G35040,AT1G63050,AT2G37600,AT4G04940,AT3G49080,AT3G11964,TOM22-V,AT5G20160,P40,AT3G18600,AT1G71850,AT4G13180,AT5G07340,AT5G10830,AT3G23300,AT5G38720,AT4G17430,AT3G07110,AT1G79140,FKBP15-2,PSAT,AT2G27710,ARPN,RPS13A,STT3B,AT1G31660,AT3G09500,ATRPAC42,AT2G25210,AT2G19385,AT5G45420,PRMT3,AT1G60770,P58IPK,AT2G34260,AT2G37400,AT5G52650,GRP4,CRT1B,GATA17,AT5G08180,AT2G21580,RPL5B,PDIL1-2,AT4G02400,ROC2,ATL5,AT1G52930,AT5G50570,TBL27,AT3G13940,AT3G59540,PARVUS,NFD1,AT4G16660,AT2G18900,AT1G15250,AT5G15810,CYP83B1,AT1G14050,GSTF9,AT3G58700,AT4G20020,AT1G76790,AT2G20940,AT5G56710,NUC-L1,ROC7,AT4G39300,PBS3,AT5G62440,TBL37,AT-IE,DECOY,AT5G27140,AT4G28450,AT1G13160,AT2G47610,AT3G15080,AT4G16630,AT3G13230,AT2G39020,CRT1A,AT3G09720,CYP79B2,AT4G21910,AT2G32580,AT2G17670,AT1G10580,AT3G28900,PAP1,YAO,PHT4;6,HB54,AT1G11330,AT2G15000,AT5G48760,RPSAB,HAP6,AT1G80530,RRP4,AT5G41400,PPAN,AT3G19790,MEE21,EXPA10,AT4G35850,GAE6,AT3G05060,AT5G55050,AT5G39600,NAP57,AT4G17390,NAP1;3,AT3G60245,AT1G23280,AT1G51890,AT2G18220,AT3G23620,AT4G23690,MLO11,AT3G52500,AT3G59820,PDIL2-2,AT1G20300,AT5G47700,AT5G44390,AT1G80750,RLK,SDF2,AT1G80615,AT1G06720,JMT,SWA1,AT5G20700,AT4G37290,AT3G51670,AT4G15770,AT3G05810,AT2G41840,CRK39,ADK1,LBD39,ECT3,GSK1,AT5G16070,AIR3,AT5G64420,AT5G14050,AT3G25120,PHT1;4,AT3G12390,AT2G44210,PAD3,AT3G15357,TOM40,AT4G27380,4CL5,AT3G02760,AT2G16660,AT2G25100,AT1G64190,AT3G25940,YSL8,AT5G57280,AT2G15320,AT5G35910,AT1G15930,RNS1,TOZ,PMT5,SAG13,LP1,PFL,GSTU6,AT3G49910,AT1G15810,PPR336,NAC096,AT1G18850,CAX3,EDA14,AT5G10290,AT5G39850,AT4G14420,PSL4,AT5G48240,AT3G22660,AT1G75670,AT3G24040,AAP1,AT5G59480,PRN,AT5G14520,AT3G01820,ERF1,AT3G04920,AT2G37190,DWF4,AT3G18280,CAX1,BCS1,SLAH3,AT5G53750,AT2G15760,AT5G61890,EMB3010,NOP10,AGP12,PDCB4,AT3G49990,AT1G20310,MTK,GSTU8,GSTU2,MYB30,AT5G01340,AT5G17760,ARA12,AT2G37770,ATPMEPCRB,AAE1,AT3G43250,GATL2,AT2G28450,AT5G44570,AT4G12500,AT5G16960,AT3G28200,AT1G25260,AT5G12160,NRT1.8,AT3G16330,RBOHF,SDN3,AT4G07410,AT5G29000,EXPA1,SKS5,AT5G49945,GSTU25,AT5G27990,AT3G02560,NDB2,WRKY31,GLU2,AT5G60250,CLT3,AT5G57480,CIPK7,ADR1,TH8,AT5G60980,PFD5,CLE12 USADEL_KIN10_UP Up-regulated-KIN10 (Table S6 PubmedID:18305208) HSPRO2,AT1G02660,DYL1,AT3G07350,AT4G27450,AT1G15740,AT5G57655,AT1G01240,AT5G18630,AT2G32150,AT5G51970,AT2G44130,TPS11,RMA1,SDP1,ASD1,AT5G56100,TPS8,FRA8,TLP2,AT5G22920,AT5G25280,AT1G18460,AT1G23390,AT1G73655,ASN1,SEN1,AT5G19120,NDF4,CH1,AT1G73650,SIGE,AT1G03610,ACX4,UGE1,BZIP1,AT1G80180,AT5G63190,AT2G38820,AT5G16340,AT3G59940,PDS1,COL5,AT4G25170,AT2G20670,TPS10,AT1G80440,J8,AT2G24550,AT3G10020,AT1G10150,BXL1,AT2G33830,AT5G45310,CXXS1,ATG8E,AT2G41250,CRR7,RVE1,AT5G59080,BT2,CDF3,WCRKC1,CP5,CP12-2,TIP2,AT3G61160,PQL2,CAM9,AT1G66130,CYP71B2,DELTA-TIP,AT1G09390,ERD4,DIN4,WES1,AT1G21400,MCCB,NAC3,GDH1,BCAT-2,PSAD-2,FADA,AT3G57020,ZF2,AT2G35680,AT3G49590,AT1G29760,AT1G28260,UKL3,AT1G53400,UVR3,AT1G74840,AT2G24240,AT5G26734,PRA1.F4,AT2G25200,AT3G56140,AT3G13062,AT3G56930,AT1G12790,AT5G58800,G18F,IVD,PIT1,AT4G35750,AT2G46220,AT3G55840,ALDH6B2,AT1G18270,BCDHBETA1,AT3G26510,PP2-A13,AT2G18680,AT3G06080,HB-12,BGLU46,AT4G10925,GBF2,AT2G39570,PYL7,MPK5,BGAL1,ZF14,GRF11,AT1G22890,AT4G19160,AT3G26890,AT2G31945,CDPK2,AT4G19370,AT3G49790,AT2G46550,ACBP2,HIS4,RSH2,ACR5,AT3G52060,BZO2H3,HON4,AT4G26290,ATSPS4F,AT2G30600,AT3G06780,SIG4,BMY3,AT3G03880,AT2G40110,ACX5,AT1G03850,AT3G14770,AT1G23120,AT3G26100,AT3G49160,SEP2,AT1G80940,AT1G03290,AT3G07340,AT5G02160,AT5G39580,PCAP1,AT2G45850,HIS1-3,FRO6,AT3G46930,AT4G33666,PHOT1,AT1G66180,AT5G02230,ARR9,CHUP1,ENT6,AT5G38990,AT2G35800,CRSH,NF-YB3,AT2G44010,AT1G61340,AT5G32450,AT1G43670,AT5G53490,RHA1A,MLO3,AT4G33980,TRP1,AT4G28080,AT5G41810,E2F1,AGD13,AT2G25460,AT5G02020,MCCA,AT1G79700,AT5G06570,STP1,AT4G38470,AT2G17880,AT1G15380,MGL,AT1G80160,AT2G39980,AT1G15045,AT1G64500,DIN2,AT3G20340,JAZ7,AT5G66650,PSBO2,SCO1,GAPA-2,FKBP13,FP6,FAD5,COR27,AT1G75460,AT4G33660,SQE3,AT3G16150,HGO,AT2G04690,NLA,AT5G58720,AT5G51390,BGAL4,BCA6,AT2G15695,ML2,AT2G40420,ATG8F,AT1G22930,AT5G24890,AT1G72060,AT1G01770,AT1G10140,AT1G33055,UGE3,XTH30,AT5G10390,AT3G15070,TTG1,AT5G59960,AT5G24870,AT1G15010,AT5G55970,AT5G28050,AT3G52070,UBC5,MEE9,AT4G19860,AT4G28040,AT5G40740,AKINBETA1,AT4G28085,AT4G33150,AGT3,AT1G05340,AT5G47390,CYP71B3,AT4G00355,AT1G54740,TCH4,AT1G22985,TLP9,AT3G03870,AT1G44770,AT1G23710,PHI-1,AT5G63620,AT2G31810,AT1G30720,ABF4,AT3G45930,J20,BCE2,AT5G23340,AT3G29240,AT3G10550,ATG18G,AT3G11620,AT1G69890,ATBETAFRUCT4,STP14,TPS9,AT1G78290,AT4G38060,AT4G19420,CYCP2;1,PSF1,AT1G56220,EXL4,PATL1,SIP2,PIP1C,AT1G02816,AT1G07040,ETFQO,ATG8H,AT1G09200,AT1G27100,GPDHC1,SEP4,AT1G70820,CINV1,ERD5,CKL13,AT5G14470,AT1G68440,AT1G25400,DIN10,AT5G52250,AT3G59930,AT2G36220,HMGB6,ACHT4,AT3G57770,AT1G72070,GLY3,AT1G68670,AT3G46690,AT3G15630,AT3G27360,AT3G09020,UCC2,AT5G41080,AT2G39400,TMAC2,AT3G61260,MIOX2,MYBL2,RHA1B,AGT,BT5,CYP71B4,AT4G16680,AT3G03150,AT3G13950,PDF1.4,XTH24,PMI1,AT3G62550,SRG3,AT2G35170,AT1G06760,PUP18,XYL4,AT5G10695,PPDK,AAE17,AT2G45220,AT2G19810,HTA13,MEE14,AT1G25275,AT3G47160,AT4G14500,AT3G51540,AT4G28290,CCL,AT1G60740,AT5G63020,AT3G15450,AT3G07310,CCOAMT,AT1G10340,DIN11,MC3,AT3G15900,HTB11,AT5G59690,AT3G01430,CYP81D4,ZIF1,AT1G03400,AT5G40690,CYP71B24,AT4G32870,AT1G66890,RMA2,CRS1,AT1G75190,AT1G69050,G6PD4,CAT6,AT5G39520,AT2G37470,NPR1,AT2G20030,AT1G54410,AT2G42900,AT5G16650,UGT71B6,AT1G24600,EXLA1,MSL3,LON2,AT4G17080,AT4G01130,AT5G19070,AT5G58730,AT2G21430,AT5G63970,VSR7,PDX1L4,AT3G60510,MYB70,AT5G14190,AT1G69570,AT5G49690,AT2G30500,WRKY70,CRY1,NF-YC4,AT4G39070,SNG1,AAE7,AT2G46690,GUT15,AT4G16985,AT5G24490,AT3G26630,F2KP,AT2G29340,AT1G67920,PYL5,PLA2A,AT4G25580,AT2G20040,AT5G15190,AT2G44370,AT3G22260,AT4G28030,PAP8,AT5G24165,AT5G23405,AT2G40620,AT2G44380,VIM3,AT4G15545,KELP,ESL1,DIN9,AT1G51400,AT1G32090,NAC046,PEX11B,TSPO,AT1G72890,CYP71B19,KIN10,AT4G30993,KTI1,RBP-DR1,AT4G23450,AT1G22500,AT5G02710,PETE1,SKP2B,AT1G78460,TRX5,AT4G10730,PCK1,AT2G47200,DMR6,HTB9,CEN2,STR18,AT5G49900,AT5G59750,AT2G28720,AT1G15040,AT1G12250,AT1G62510,AT5G47050,AT3G14067,WAKL4,AT1G63580,MHX,AT1G50440,AT4G30670,AT1G22570,RD20,AT2G03750,AT3G25870,CCD7,LBD41,AT1G20180,AT5G53590,AT3G19800,WOX2,MES9,AT1G80380,AT4G25940,RALFL18,G6PD1,AT3G23700,MES5,AT2G44360,AT5G15120,AT4G18950,ROPGEF7,AT3G17160,AT4G35760,AT1G61750,PP2-A14,AT3G49060 USADEL_LIGHT/DARK_SUC_UP Induced-group in early in the light/dark cycle >2-fold changes within 30 min after adding 15 mM Suc to C-starved seedlings was extracted from Osuna et al. (2007). (Table II PubmedID:18305208) AT5G12110,AT5G48570,AT3G12580,AT5G64510 USADEL_LIGHT/DARK_SUC_DN Repressed-group in early in the light/dark cycle >2-fold changes within 30 min after adding 15 mM Suc to C-starved seedlings was extracted from Osuna et al. (2007). (Table II PubmedID:18305208) AT5G17300,AT5G28770,AT5G39660,AT1G68840,AT4G37610,AT3G48360,AT3G23880,AT4G28270,AT1G23870,AT5G18670,AT5G18630,AT5G61440,AT1G10150,AT4G39675,AT3G15630,AT3G06070,AT3G52060 USADEL_DIURNAL-CYCLE-SUC_UP Induced-group in Slightly later in the diurnal cycle >2-fold changes within 30 min after adding 15 mM Suc to C-starved seedlings was extracted from Osuna et al. (2007). (Table II PubmedID:18305208) AT5G20150,AT5G47060,AT3G24500,AT3G16050,AT3G09440,AT3G14200,AT2G22500,AT1G67360,AT2G46240,AT3G44450,AT1G66080 USADEL_DIURNAL-CYCLE-SUC_DN Repressed-group in Slightly later in the diurnal cycle >2-fold changes within 30 min after adding 15 mM Suc to C-starved seedlings was extracted from Osuna et al. (2007). (Table II PubmedID:18305208) AT1G13260,AT2G18300,AT5G61590,AT5G49450,AT1G25560,AT1G69490,AT1G80440,AT3G61060,AT1G23390,AT2G25900,AT5G22920,AT1G70290,AT1G60140,AT2G18700,AT2G45170,AT4G15680,AT4G15700,AT3G62950,AT5G65660,AT1G80920,AT1G13700,AT4G18340,AT5G08350,AT2G17880,AT3G26510,AT1G08570,AT3G15450,AT5G11070,AT2G40000,AT5G60680,AT4G05070,AT2G25200,AT3G07310,AT2G20670,AT3G06080,AT1G54740,AT1G49500,AT3G07350,AT2G27830,AT3G49790,AT4G33666,AT2G24550 USADEL_START-NIGHT_SUC_UP Induced-group in Start of the extended night >2-fold changes within 30 min after adding 15 mM Suc to C-starved seedlings was extracted from Osuna et al. (2007). (Table II PubmedID:18305208) AT2G01150,AT4G39800,AT1G61800,AT3G13650,AT1G54050,AT5G24660 USADEL_START-NIGHT_SUC_DN Repressed-group in Start of the extended night >2-fold changes within 30 min after adding 15 mM Suc to C-starved seedlings was extracted from Osuna et al. (2007). (Table II PubmedID:18305208) AT1G03850,AT1G05575,AT1G10140,AT1G15040,AT1G33055,AT1G52250,AT1G74840,AT1G75190,AT1G76410,AT1G76590,AT1G80160,AT2G29300,AT2G31945,AT2G32150,AT2G38820,AT3G03870,AT3G10120,AT3G15500,AT3G52070,AT3G59940,AT4G03510,AT4G11360,AT4G16000,AT4G27410,AT5G23350,AT5G24890,AT5G39610,AT5G41080,AT5G44260,AT5G47390,AT5G51440,AT5G61600 USADEL_LATE-NIGHT_SUC_UP Induced-group in Late in the extended night >2-fold changes within 30 min after adding 15 mM Suc to C-starved seedlings was extracted from Osuna et al. (2007). (Table II PubmedID:18305208) AT5G63130,AT2G20560,AT5G52640,AT2G29500,AT5G12020,AT5G12030 USADEL_LATE-NIGHT_SUC_DN Repressed-group in Late in the extended night >2-fold changes within 30 min after adding 15 mM Suc to C-starved seedlings was extracted from Osuna et al. (2007). (Table II PubmedID:18305208) AT5G13080,AT4G37010,AT3G15440,AT2G47270,AT3G20340,AT2G34600 USADEL_NO-CHANGES-SUGAR_SUC_UP Induced-group in No or unrelated to the changes of sugars >2-fold changes within 30 min after adding 15 mM Suc to C-starved seedlings was extracted from Osuna et al. (2007). (Table II PubmedID:18305208) AT3G15310,AT3G21890,AT3G59220,AT4G39675,AT5G15950,AT5G19875,AT5G35320,AT5G49480,AT5G51390,AT5G59080,AT5G66690,AT5G67420 USADEL_NO-CHANGES-SUGAR_SUC_DN Repressed-group in No or unrelated to the changes of sugars >2-fold changes within 30 min after adding 15 mM Suc to C-starved seedlings was extracted from Osuna et al. (2007). (Table II PubmedID:18305208) AT1G71030,AT5G37260,AT1G69600,AT1G72200,AT1G68520,AT1G49200,AT2G34620,AT4G36040,AT5G43520 THOMAS_OBE1-1-OBE2-2/WT_UP Up-regulated expressed in the obe1-1 obe2-2 when compared to wild type (Table S1 PubmedID:19392692) AT4G12500,AT4G27140,AT3G46280,AT4G12490,AT5G44120,AT5G39580,AT4G22470,AT4G28520,AT1G51800,AT1G03880,AT4G12480,AT4G27150,AT4G27160,AT4G14630,AT1G65500,AT1G51850,AT2G44380,AT2G44370,AT2G43620,AT2G36690,AT5G64120,AT4G36700,AT4G01700,AT2G17740,AT5G44380,AT4G08770,AT1G64170,AT3G02240,AT3G13610,AT3G26210,AT1G51790,AT4G27170,AT5G48430,AT4G26200,AT1G52200,AT4G32650,AT2G39200,AT4G23700,AT5G63600,AT1G76930,AT5G44910,AT1G73260,AT5G46050,AT5G26280,AT4G02330,AT2G45220,AT1G30700,AT4G12470,AT4G11650,AT3G50480,AT1G18980,AT3G18280,AT3G01290,AT5G50200,AT3G62270,AT4G30170,AT5G59520,AT3G48920,AT5G64100,AT4G20860,AT5G09530,AT3G51330,AT5G54740,AT3G01420,AT1G30110,AT4G25140,AT5G11920,AT5G43580,AT3G21720,AT2G44790,AT2G39210,AT2G39380,AT4G21680,AT3G14680,AT2G42360,AT1G18970,AT5G40420,AT5G45380,AT3G18250,AT1G02360,AT2G26440,AT3G54420,AT2G27660,AT1G51890,AT1G78000,AT4G38080,AT4G11460,AT5G58660,AT1G65690,AT2G43570,AT5G40780,AT1G21250,AT3G14060,AT4G09420,AT2G29995,AT1G65390,AT3G13790,AT2G23620,AT3G53480,AT4G08850,AT5G50760,AT2G28630,AT3G52450,AT1G21310,AT4G15610,AT1G71880,AT4G20110,AT1G61800,AT2G19190,AT2G44010,AT5G17330,AT4G25810,AT5G52830,AT1G59740,AT3G50740,AT4G19690,AT3G54040,AT1G48130,AT2G38870,AT3G04070,AT5G46230,AT1G24280,AT1G33440,AT2G18690,AT4G16260,AT1G09560,AT1G22500,AT5G53110,AT5G37600,AT5G09480,AT5G10180,AT2G42060,AT5G04950,AT2G24570,AT4G23260,AT2G37750,AT4G19810,AT5G44390,AT1G26420,AT4G25110,AT5G43170,AT3G12500,AT4G14365,AT1G73680,AT5G22890,AT1G70140,AT4G15390,AT1G13300,AT3G50010,AT2G21045,AT5G03700,AT2G29740,AT1G56010,AT1G05700,AT1G10340,AT5G66390,AT3G29810,AT3G11340,AT5G20400,AT4G31550,AT1G51820,AT5G48540,AT1G17860,AT2G23540,AT3G62280,AT4G30280,AT4G36430,AT1G73600,AT5G06740,AT2G37130,AT1G29280,AT1G14210,AT1G67330,AT3G45530,AT3G09270,AT2G02680,AT2G41660,AT4G21410,AT4G13660,AT2G40330,AT5G36220,AT5G13420,AT1G51860,AT1G15670,AT2G39530,AT3G59700,AT2G25000,AT3G16530,AT1G49860,AT1G23140,AT5G49520,AT1G71400,AT5G53870,AT3G22060,AT2G18980,AT1G12110,AT4G01720,AT1G05300,AT3G16030,AT1G19380,AT3G04720,AT3G12700,AT1G80130,AT4G05390,AT2G28490,AT4G23600,AT3G13650,AT5G57220,AT3G22620,AT4G07820,AT3G14940,AT1G04560,AT4G30670,AT2G43510,AT3G26440,AT3G09220,AT3G23430,AT3G22600,AT5G24090,AT3G46690,AT1G60680,AT1G26380,AT5G26920,AT5G12420,AT3G45860,AT5G24030,AT2G28890,AT3G21230,AT4G16990,AT1G61360,AT1G13080,AT4G36670,AT5G38780,AT1G72200,AT5G42840,AT5G25930,AT1G62300,AT5G33290,AT2G34490,AT4G23680,AT3G20370,AT2G19970,AT3G44320,AT4G25900,AT4G23300,AT3G04110,AT1G59960,AT3G27190,AT5G24160,AT3G26230,AT2G38860,AT1G29050,AT4G32950,AT4G25090,AT2G23680,AT1G10550,AT1G56430,AT2G35930,AT4G16563,AT2G33480,AT5G55170,AT1G51830,AT1G62790,AT1G77920,AT4G33050,AT5G44820,AT4G36990,AT4G30190,AT1G14370,AT1G73190,AT3G20470,AT2G41380,AT4G33420,AT4G01480,AT1G22360,AT3G60140,AT5G37740,AT1G30900,AT1G48750,AT1G17020,AT4G36110,AT2G17720,AT2G18360,AT2G41230,AT5G12880,AT1G80830,AT1G49320,AT3G09490,AT4G08470,AT2G32660,AT2G38530,AT4G23200,AT5G42860,AT1G14780,AT2G31980,AT2G43140,AT1G34750,AT4G24240,AT1G24530,AT5G18310,AT2G26170,AT5G58860,AT1G52700,AT3G26220,AT4G33550,AT1G22440,AT5G03860,AT1G44160,AT2G04040,AT5G67450,AT2G29120,AT5G58350,AT5G53550,AT3G08860,AT4G17800,AT2G35910,AT3G01570,AT4G36380,AT4G27730,AT1G04040,AT1G07630,AT1G44970,AT3G25610,AT5G38900,AT1G74210,AT5G55930,AT3G02910,AT1G69450,AT5G42830,AT1G43910,AT1G74460,AT3G49210,AT3G46900,AT5G65210,AT5G47910,AT5G45070,AT4G38550,AT4G08780,AT1G18380,AT3G47960,AT2G16700,AT1G78780,AT2G02450,AT2G27920,AT1G27030,AT4G18910,AT4G18010,AT5G52810,AT1G13110,AT5G21105,AT1G61370,AT1G26410,AT4G21120,AT3G55470,AT1G70990,AT3G16450,AT3G19930,AT2G25680,AT2G22880,AT1G74010,AT3G45710,AT1G28010,AT1G33560,AT3G19660,AT5G20700,AT3G15950,AT2G41730,AT1G30750,AT1G61380,AT2G29340,AT3G21240,AT5G53370,AT2G16430,AT3G51440,AT1G22180,AT1G64400,AT3G13672,AT1G13100,AT3G09940,AT5G20790,AT4G13580,AT2G31110,AT5G62480,AT5G25820,AT4G01250,AT4G23010,AT1G68150,AT4G08620,AT4G20460,AT3G19010,AT2G39350,AT4G31980,AT4G20830,AT4G31500,AT2G22170,AT5G62680,AT5G62920,AT1G27980,AT1G62290,AT3G55150,AT1G17060,AT3G07000,AT1G05000,AT1G07610,AT4G13510,AT4G34180,AT5G01540,AT5G47100,AT1G26390,AT5G24230,AT1G63940,AT1G74440,AT1G18390,AT5G27420,AT4G26260,AT1G74790,AT4G24130,AT5G39020,AT1G72300,AT4G12080,AT1G15040,AT3G22750,AT1G09740,AT5G06330,AT3G09260,AT5G45480,AT5G41040,AT2G30870,AT1G30510,AT2G24580,AT1G73120,AT1G08090,AT1G62710,AT1G80820,AT5G42180,AT2G16790,AT1G07390,AT5G19550,AT2G26650,AT2G47000,AT1G55020,AT5G41670,AT1G65610,AT1G51620,AT5G38530,AT3G24503,AT1G13750,AT5G13330,AT5G56080,AT4G05590,AT5G60270,AT4G34230,AT4G31970,AT1G07090,AT1G66880,AT2G36100,AT1G49000,AT5G62150,AT4G20000,AT3G56170,AT4G01910,AT1G03850,AT1G13830,AT5G16080,AT4G32870,AT5G25440,AT3G26590,AT3G57700,AT3G63380,AT2G44480,AT5G60950,AT2G25510,AT5G43060,AT3G52190,AT2G21850,AT4G14465,AT3G23190,AT4G36220,AT1G65730,AT1G66160,AT2G41180,AT5G58650,AT4G14610,AT4G39670,AT5G61660,AT4G18950,AT4G23130,AT3G46270,AT5G54160,AT2G02630,AT2G42350,AT4G11530,AT2G28110,AT5G65870,AT3G61990,AT2G17710,AT4G30270,AT2G02220,AT1G32940,AT3G56200,AT2G48140,AT2G17130,AT1G62810,AT4G23290,AT1G70520,AT3G22240,AT3G27210,AT1G01340,AT4G16240,AT4G27860,AT5G62630,AT1G55450,AT4G10380,AT4G31800,AT3G43800,AT1G53310,AT3G25640,AT1G77330,AT3G22550,AT5G19970,AT3G03520,AT1G68795,AT4G23470,AT4G16670,AT4G03820,AT1G66830,AT2G27150,AT3G21770,AT1G70810,AT3G16460,AT3G17790,AT5G46780,AT2G44350,AT3G20960,AT5G09800,AT3G50260,AT2G41090,AT4G00955,AT4G33360,AT1G74030,AT4G20780,AT3G45410,AT4G35060,AT5G59490,AT5G66490,AT1G69850,AT4G02075,AT1G78050,AT4G23570,AT5G37690,AT4G38620,AT2G32300,AT3G05320,AT2G19570,AT5G20960,AT5G48290,AT3G28940,AT2G41700,AT2G28670,AT4G18430,AT5G35735,AT4G38540,AT2G30750,AT1G74590,AT2G39660,AT1G22650,AT4G23690,AT3G15510,AT5G15130,AT3G16560,AT4G23190,AT1G32450,AT3G14230,AT1G14070,AT1G77990,AT5G61520,AT5G09520,AT4G23270,AT5G65640,AT1G17960,AT1G60730,AT3G44450,AT3G22850,AT3G57380,AT3G47480,AT2G47130,AT4G08390,AT1G21910,AT2G20560,AT1G49030,AT4G26970,AT1G19020,AT5G05440,AT5G59680,AT3G01720,AT5G61340,AT3G49860,AT4G31940,AT5G67340,AT1G19610,AT3G02885,AT5G03380,AT1G67110,AT3G54640,AT3G06300,AT5G26340,AT5G12930,AT3G44990,AT3G54940,AT3G30775,AT1G30270,AT5G55560,AT4G29140,AT5G47880,AT1G08940,AT1G04980,AT5G47000,AT5G45280,AT2G39420,AT2G27360,AT4G37870,AT5G05600,AT2G35770,AT3G20100,AT3G28840,AT1G11580,AT1G44170,AT3G05660,AT2G22500,AT1G14540,AT1G02220,AT4G26910,AT4G21380,AT5G43780,AT5G11670,AT4G21400,AT5G26010,AT1G21010,AT2G19130,AT1G02810,AT1G53920,AT3G50760,AT1G21120,AT3G52470,AT1G65510,AT1G32170,AT5G44550,AT4G17215,AT1G64380,AT1G75750,AT3G04120,AT4G36640,AT4G30450,AT3G05360,AT4G17070,AT1G75900,AT2G48130,AT2G05940,AT3G02480,AT5G52750,AT4G18250,AT4G00330,AT1G67940,AT3G29250,AT1G06520,AT4G21620,AT3G08640,AT4G27480,AT3G06860,AT1G49310,AT2G31730,AT4G26090,AT1G11700,AT5G45500,AT5G54300,AT5G63580,AT1G17230,AT2G21100,AT1G74020,AT3G28910,AT5G58620,AT3G27890,AT5G54860,AT2G28460,AT2G34070,AT2G04070,AT2G03760,AT5G05190,AT5G60120,AT5G41990,AT5G53420,AT3G14280,AT1G44100,AT4G16350,AT1G15890,AT1G22400,AT2G36210,AT5G64510,AT5G11970,AT4G21390,AT1G19180,AT2G31120,AT2G46750,AT5G44290,AT5G48410,AT2G17290,AT5G10820,AT4G23810,AT2G01900,AT2G05520,AT4G14220,AT5G61010,AT5G35370,AT1G08630,AT2G44460,AT1G28580,AT5G07200,AT2G27080,AT1G67470,AT1G33790,AT3G54990,AT1G54220,AT3G18830,AT1G36060,AT3G45140,AT2G22510,AT5G58375,AT2G28120,AT4G11190,AT1G61560,AT3G22120,AT2G15390,AT1G65520,AT4G18880,AT1G67800,AT5G09440,AT5G46450,AT5G22555,AT5G43360,AT2G36380,AT1G28600,AT3G15650,AT5G14000,AT2G24180,AT1G16130,AT3G60440,AT3G17810,AT2G02810,AT2G16890,AT3G09830,AT3G12520,AT1G04120,AT5G13320,AT2G34960,AT3G27960,AT3G54960,AT2G35290,AT4G25030,AT1G69410,AT3G09020,AT1G55850,AT1G59870,AT1G50740,AT3G11820,AT5G06570,AT2G46420,AT5G60280,AT5G13490,AT5G39670,AT5G01300,AT3G25290,AT1G26690,AT1G69810,AT3G56950,AT4G23510,AT1G07890,AT2G47010,AT2G30210,AT4G30060,AT5G67500,AT5G39030,AT5G10740,AT4G02050,AT4G40070,AT4G21870,AT3G43600,AT5G54140,AT3G54950,AT3G48570,AT5G06320,AT5G26270,AT5G63410,AT1G20510,AT5G45780,AT1G13950,AT2G18950,AT1G17745,AT3G15990,AT5G19980,AT3G63010,AT3G21090,AT2G44490,AT3G07040,AT2G17760,AT4G01610,AT1G21750,AT4G03320,AT5G40850,AT1G08320,AT2G15080,AT5G07580,AT2G36750,AT4G39730,AT2G30140,AT2G47140,AT4G04220,AT3G02880,AT1G28570,AT1G23720,AT2G38310,AT4G39950,AT3G13760,AT2G30970,AT1G13700,AT1G68765,AT4G00700,AT2G24762,AT4G35380,AT1G17250,AT4G30640,AT3G52500,AT2G35610,AT2G31880,AT3G53210,AT5G42010,AT5G28020,AT3G08720,AT3G26320,AT1G07000,AT2G32920,AT4G39210,AT4G19420,AT4G30110,AT5G05460,AT5G08300,AT5G18780,AT2G35300,AT1G15790,AT5G54020,AT1G28680,AT3G50900,AT1G05570,AT2G23610,AT2G17220,AT5G47550,AT2G25735,AT3G58060,AT1G09310,AT3G51660,AT1G69870,AT5G51640,AT3G60180,AT5G66350,AT1G21380,AT4G36920,AT2G22780,AT1G74100,AT1G76560,AT1G49160,AT5G63760,AT3G13910,AT5G20050,AT3G12040,AT1G15640,AT1G17830,AT2G41220,AT5G19440,AT3G54110,AT1G34180,AT1G22410,AT2G28710,AT4G28890,AT4G10500,AT1G09780,AT2G31390,AT4G37970,AT1G71740,AT1G05710,AT2G21180,AT4G02360,AT5G65750,AT5G40540,AT3G52400,AT1G70230,AT3G28950,AT4G23220,AT5G36880,AT2G26560,AT3G13330,AT5G10300,AT3G48000,AT4G16370,AT5G27350,AT3G27390,AT4G31130,AT4G36610,AT2G01670,AT4G11290,AT2G15620,AT2G23890,AT2G44670,AT5G17990,AT3G25870,AT2G30840,AT5G45410,AT1G24180,AT5G39090,AT3G01930,AT4G15093,AT2G33630,AT4G35985,AT1G71040 THOMAS_OBE1-1-OBE2-2/WT_DN Down-regulated expressed in the obe1-1 obe2-2 when compared to wild type (Table S1 PubmedID:19392692) AT2G42750,AT4G03510,AT2G42800,AT1G20440,AT4G27430,AT3G20015,AT4G27700,AT5G26850,AT1G73750,AT2G23840,AT1G80370,AT3G26200,AT4G33400,AT3G13750,AT3G15450,AT1G35780,AT3G60390,AT3G57830,AT1G03630,AT1G74055,AT1G75250,AT5G57130,AT2G23760,AT1G72670,AT5G59000,AT3G15520,AT5G05690,AT3G07010,AT3G62930,AT5G16000,AT2G14890,AT5G57110,AT4G37260,AT2G38780,AT5G09220,AT1G14460,AT4G12030,AT1G12250,AT1G49780,AT3G52490,AT3G54560,AT1G28070,AT5G61480,AT5G10620,AT3G10940,AT1G14290,AT3G16250,AT1G51400,AT2G36400,AT5G19260,AT2G46870,AT1G70370,AT2G43100,AT3G17040,AT2G29180,AT4G15140,AT2G36490,AT4G26760,AT3G63440,AT2G37640,AT3G56240,AT3G23840,AT5G40970,AT5G09660,AT2G34560,AT1G22640,AT2G46550,AT3G07320,AT5G67270,AT5G56220,AT4G09010,AT5G56590,AT5G46700,AT1G55330,AT3G18850,AT2G37460,AT3G25980,AT3G07420,AT5G54980,AT5G04200,AT1G74930,AT5G13840,AT4G32830,AT5G45700,AT4G29100,AT1G70210,AT3G61830,AT4G05070,AT1G64720,AT1G49230,AT1G78580,AT5G01090,AT3G15780,AT1G01240,AT5G54510,AT2G22540,AT1G06100,AT1G68810,AT4G08300,AT2G28470,AT4G37410,AT5G04810,AT1G11260,AT3G06030,AT3G12730,AT1G68600,AT5G52100,AT1G13670,AT1G05385,AT5G51910,AT5G25590,AT1G18880,AT2G22840,AT2G28950,AT5G06270,AT4G23920,AT4G16442,AT3G01750,AT2G18890,AT1G76410,AT1G29980,AT5G54630,AT5G57170,AT3G57600,AT1G31690,AT5G14210,AT3G24660,AT2G33310,AT4G22510,AT2G45050,AT3G02170,AT1G64640,AT3G47180,AT2G22330,AT4G01120,AT2G46910,AT5G12250,AT2G42900,AT4G29360,AT2G42620,AT4G27440,AT2G39470,AT5G48900,AT1G33170,AT5G19120,AT1G10060,AT1G51460,AT5G44400,AT3G20670,AT1G73080,AT1G71990,AT3G07880,AT1G26450,AT3G53800,AT5G49450,AT1G47270,AT3G13510,AT3G19590,AT1G71830,AT2G40000,AT5G14510,AT3G52540,AT1G30820,AT3G07310,AT4G38430,AT1G19715,AT2G45340,AT5G13100,AT3G10840,AT2G23950,AT1G15340,AT1G77490,AT3G25570,AT3G21600,AT1G21440,AT2G17300,AT4G10030,AT4G00230,AT3G05030,AT1G71695,AT5G64380,AT5G16400,AT4G39860,AT2G15090,AT1G11130,AT5G60210,AT1G74070,AT2G25880,AT5G54530,AT1G53520,AT1G30520,AT1G29520,AT1G69040,AT5G40150,AT5G62580,AT1G31335,AT5G18210,AT3G22150,AT5G64780,AT3G22210,AT3G23080,AT1G17190,AT2G32990,AT5G17650,AT4G28703,AT4G03190,AT1G80280,AT3G18160,AT5G60200,AT5G62940,AT3G16920,AT3G15790,AT3G30300,AT2G22670,AT5G24490,AT2G15830,AT5G58480,AT5G25090,AT1G60800,AT5G03260,AT4G37740,AT1G09750,AT3G25560,AT4G00480,AT4G11130,AT2G35820,AT3G03680,AT2G26760,AT5G51550,AT5G28640,AT5G18240,AT5G04230,AT3G25190,AT2G38460,AT4G22890,AT3G55420,AT4G25260,AT5G11420,AT1G27130,AT5G42200,AT5G05890,AT3G02120,AT1G76110,AT5G08330,AT1G73470,AT3G12870,AT2G29550,AT1G14920,AT5G37790,AT3G50240,AT5G48790,AT3G15570,AT1G67750,AT1G68400,AT3G17160,AT1G77060,AT4G09890,AT5G19140,AT2G17650,AT3G61250,AT5G67260,AT5G14960,AT2G05540,AT1G05310,AT1G62030,AT2G43010,AT1G78370,AT4G23750,AT3G18800,AT1G10380,AT1G65230,AT1G30600,AT3G07540,AT1G17200,AT1G27210,AT5G18430,AT3G15500,AT2G27970,AT1G21090,AT3G13000,AT5G14940,AT4G16146,AT2G20875,AT3G08920,AT2G25060,AT2G40480,AT5G49170,AT1G79700,AT5G15530,AT2G41820,AT5G66080,AT3G19380,AT5G03120,AT5G54660,AT1G63180,AT2G34510,AT5G64310,AT1G73330,AT4G14270,AT4G17810,AT4G02290,AT2G41340,AT5G23010,AT2G25790,AT3G51280,AT1G13710,AT4G16480,AT5G37010,AT1G70290,AT1G03020,AT2G01420,AT1G50240,AT4G29020,AT4G39770,AT2G28810,AT4G13830,AT5G44030,AT1G75710,AT1G17700,AT5G57340,AT5G02260,AT4G15680,AT5G44680,AT1G76540,AT5G43020,AT5G01930,AT1G56210,AT5G60680,AT4G36360,AT3G56810,AT3G06035,AT1G14280,AT4G38690,AT3G03190,AT1G28290,AT2G01950,AT5G51560,AT1G33340,AT5G50160,AT1G21830,AT3G02110,AT3G53980,AT5G33370,AT1G11850,AT5G25490,AT3G10080,AT4G34220,AT1G75240,AT1G10120,AT4G26520,AT4G39710,AT1G54050,AT5G66440,AT2G32090,AT1G47670,AT5G23860,AT1G52140,AT5G44420,AT5G25840,AT3G25710,AT2G15960,AT5G63710,AT4G35350,AT1G70820,AT4G18970,AT2G20670,AT1G32100,AT4G38860,AT5G50130,AT5G40960,AT4G29190,AT1G69690,AT4G34760,AT1G23080,AT5G50335,AT1G44110,AT5G48480,AT1G27120,AT5G65410,AT4G04630,AT4G15660,AT3G61260,AT3G62020,AT1G77210,AT5G02160,AT5G21170,AT3G21550,AT3G23730,AT5G66560,AT3G27200,AT4G37250,AT5G25475,AT1G02110,AT2G30540,AT4G38740,AT4G34250,AT1G28710,AT1G43790,AT1G22740,AT5G59080,AT1G12845,AT2G22900,AT1G65860,AT4G37750,AT3G48740,AT5G01880,AT1G21500,AT3G15095,AT5G46240,AT3G49260,AT2G32765,AT1G26920,AT4G01130,AT3G10020,AT2G43550,AT1G68780,AT1G68190,AT1G79840,AT2G18700,AT2G28410,AT2G28790,AT4G29080,AT2G22990,AT5G59330,AT3G57260,AT2G45660,AT2G45470,AT5G19530,AT1G01620,AT2G37030,AT5G08350,AT5G01075,AT2G36050,AT4G03210,AT4G30520,AT3G55710,AT3G29370,AT1G29395,AT1G19850,AT3G62950,AT3G54260,AT5G51750,AT5G04190,AT1G28330,AT1G20850,AT5G22580,AT1G20650,AT5G45670,AT5G55730,AT1G67040,AT5G02550,AT1G70710,AT2G02100,AT3G14760,AT1G11600,AT1G72970,AT3G10570,AT5G45040,AT1G08560,AT1G02640,AT1G14440,AT3G17680,AT5G01015,AT5G03170,AT5G43810,AT3G62820,AT1G02730,AT3G28740,AT2G13820,AT1G53885,AT3G60530,AT4G34980,AT1G63310,AT1G48330,AT2G29310,AT5G16250,AT3G02640,AT5G39860,AT5G02600,AT4G22490,AT4G12970,AT4G17460,AT1G18650,AT1G19670,AT3G19620,AT1G01070,AT4G15700,AT5G15310,AT5G13290,AT1G01900,AT3G62550,AT5G05160,AT2G43800,AT1G80080,AT4G32280,AT1G12860,AT4G31840,AT4G21650,AT5G48360,AT5G01370,AT3G05600,AT2G42840,AT2G32150,AT5G45820,AT2G16740,AT5G47500,AT1G02205,AT4G00880,AT2G22980,AT2G29290,AT5G46690,AT5G44260,AT1G18250,AT2G26330,AT5G04080,AT5G23940,AT3G15353,AT3G58120,AT1G79430,AT4G16000,AT2G39850,AT3G51290,AT2G25900,AT2G15680,AT3G04630,AT4G20270,AT5G01240,AT1G04110,AT4G08290,AT5G49660,AT5G45350,AT4G37980,AT3G20570,AT4G38660,AT5G57350,AT1G06830,AT2G21050,AT1G71030,AT1G07640,AT5G23660,AT5G48490,AT3G13980,AT4G12980,AT2G17880,AT5G62280,AT4G29030,AT4G15690,AT5G04150,AT1G52000,AT1G49470,AT3G01680,AT1G73630,AT2G42530,AT3G15680,AT4G33666,AT5G07030,AT3G11930,AT1G47960,AT2G47270,AT1G54040,AT5G63850,AT5G47240,AT4G19840,AT3G19710,AT2G14580,AT5G57760,AT2G42870,AT5G54190,AT3G28220,AT3G04290,AT4G14020,AT2G33850,AT2G32100,AT3G01670,AT3G61210,AT3G16670,AT4G26530,AT2G32860,AT3G53250,AT1G22710,AT5G65730,AT5G64240,AT1G66100,AT5G24800,AT1G06080,AT1G52400,AT1G67860,AT1G64370,AT4G00780,AT5G18600,AT1G23130,AT1G67870,AT1G67865 THOMAS_OBE1I-OBE2I/WT_UP Up-regulated expressed in the obe1i obe2i mutant seedlings when compared to wild type (Table S2 PubmedID:19392692) AT4G12490,AT4G12500,AT4G12480,AT4G12470,AT1G65500,AT5G64120,AT2G14610,AT2G43620,AT3G57260,AT5G50200,AT1G76930,AT4G02380,AT4G36670,AT3G18250,AT4G11650,AT2G18660,AT1G64170,AT4G10500,AT5G45380,AT3G13790,AT4G01700,AT2G39210,AT2G43570,AT1G73260,AT3G01290,AT1G52200,AT3G26830,AT5G26920,AT4G38080,AT3G46280,AT1G65690,AT3G12500,AT3G45860,AT5G46050,AT2G24850,AT1G15670,AT2G17740,AT5G18470,AT4G23150,AT5G59320,AT1G13470,AT3G50480,AT1G09970,AT5G40780,AT5G52760,AT5G22570,AT5G48540,AT5G44420,AT1G30900,AT4G11890,AT2G18690,AT3G26210,AT2G26020,AT3G22060,AT1G30700,AT5G09530,AT2G19190,AT3G51330,AT1G51850,AT5G39520,AT3G22600,AT4G04500,AT3G49580,AT1G05300,AT4G04490,AT2G43510,AT5G10760,AT4G00700,AT1G75040,AT4G22470,AT4G14365,AT3G49780,AT4G02330,AT1G74710,AT5G17220,AT4G08850,AT2G32680,AT4G23260,AT5G42800,AT5G37600,AT1G78000,AT2G37130,AT3G18830,AT4G39030,AT2G38870,AT1G51800,AT1G10340,AT4G08770,AT3G04720,AT4G20110,AT2G17710,AT1G19180,AT2G30750,AT2G31880,AT4G32940,AT2G02220,AT3G13610,AT4G14090,AT1G73330,AT1G51890,AT1G19020,AT1G03850,AT5G45890,AT5G27420,AT1G61800,AT1G35230,AT5G39670,AT3G47480,AT5G55930,AT1G73680,AT2G47130,AT4G36430,AT3G54420,AT1G47400,AT5G53110,AT3G50740,AT1G76960,AT4G33050,AT4G23810,AT4G15610,AT4G21120,AT1G27730,AT5G53550,AT2G41410,AT1G72060,AT5G37740,AT5G24530,AT3G14990,AT2G41100,AT5G55450,AT2G22860,AT1G80130,AT3G16460,AT2G44370,AT2G26440,AT5G54060,AT1G17745,AT2G29350,AT3G18280,AT4G19810,AT5G18310,AT2G30140,AT2G18370,AT4G37370,AT2G44790,AT5G36220,AT1G67920,AT3G13950,AT4G16260,AT5G48850,AT3G16030,AT2G39200,AT3G08860,AT1G43910,AT1G07630,AT3G17790,AT4G23220,AT1G33960,AT5G13320,AT5G43580,AT2G45220,AT5G38900,AT2G24570,AT5G04720,AT5G20230,AT1G66880,AT4G15530,AT1G35710,AT5G24660,AT3G01830,AT1G05570,AT5G11920,AT1G26390,AT5G52750,AT1G52000,AT2G38860,AT1G09560,AT1G12110,AT2G36690,AT3G57240,AT2G23540,AT1G77510,AT4G23700,AT3G55980,AT5G10380,AT3G58550,AT4G35180,AT1G57630,AT1G45145,AT4G39950,AT1G26420,AT5G67340,AT4G01720,AT3G09940,AT1G02360,AT2G44380,AT5G52810,AT5G12420,AT5G57220,AT3G11340,AT5G58650,AT1G23020,AT2G28890,AT2G39030,AT1G08090,AT5G09480,AT1G67330,AT1G70530,AT3G19930,AT1G68840,AT3G20250,AT2G23320,AT3G26230,AT3G51440,AT5G55560,AT4G05590,AT1G21310,AT2G34810,AT3G19010,AT3G47340,AT3G52400,AT5G33290,AT3G55470,AT4G10380,AT5G47910,AT3G04070,AT3G09260,AT5G58350,AT5G64510,AT3G47420,AT5G25930,AT3G25010,AT4G31550,AT5G55170,AT1G05575,AT5G62680,AT5G01210,AT2G42360,AT2G13810,AT1G23140,AT1G14370,AT5G24160,AT4G30190,AT1G22890,AT2G30770,AT1G21240,AT4G27260,AT2G29120,AT2G04450,AT1G10970,AT4G34230,AT1G69870,AT2G32800,AT3G14620,AT4G14630,AT1G70850,AT2G26560,AT5G52390,AT5G11930,AT5G01540,AT4G21850,AT2G39420,AT5G44550,AT4G20860,AT4G34180,AT1G51790,AT2G39660,AT3G26220,AT5G17760,AT5G48380,AT4G36990,AT1G05340,AT3G25610,AT1G18390,AT4G33550,AT1G64400,AT2G40140,AT1G61380,AT1G56150,AT2G37710,AT4G20000,AT3G21770,AT2G30250,AT3G63010,AT1G33560,AT1G73500,AT1G15520,AT2G40110,AT1G09080,AT2G25735,AT2G30550,AT5G44910,AT4G28490,AT2G37750,AT1G07090,AT5G60950,AT3G14060,AT2G28630,AT1G59740,AT1G53310,AT2G36380,AT3G14050,AT4G17670,AT2G38530,AT3G54960,AT3G57330,AT1G80840,AT2G27660,AT1G62300,AT4G18250,AT5G53420,AT1G08930,AT1G24530,AT3G50930,AT3G55130,AT1G63840,AT4G18880,AT2G38470,AT1G27770,AT4G32870,AT1G08050,AT3G28540,AT1G32900,AT4G23010,AT4G12720,AT3G27210,AT5G26220,AT5G09440,AT1G25560,AT1G67360,AT3G52430,AT1G21000,AT3G01420,AT1G68620,AT3G61990,AT1G22500,AT5G19875,AT2G23810,AT5G46230,AT1G73800,AT5G63680,AT1G72900,AT5G51070,AT5G05340,AT4G01610,AT4G31500,AT1G66830,AT1G11580,AT2G47800,AT4G37640,AT4G28390,AT3G22620,AT1G21250,AT5G62150,AT4G24240,AT3G60420,AT2G29995,AT3G16530,AT4G33300,AT4G13510,AT3G53980,AT5G07440,AT5G24210,AT5G55420,AT3G60690,AT1G60420,AT1G32940,AT2G23680,AT1G04120,AT4G28270,AT2G22500,AT1G12200,AT4G27450,AT5G61010,AT4G13180,AT5G26340,AT1G13340,AT1G78410,AT3G45640,AT1G61360,AT2G17720,AT3G02260,AT4G23570,AT1G18210,AT4G23270,AT4G39830,AT1G49050,AT5G17330,AT3G23430,AT3G56170,AT5G20960,AT1G04980,AT4G38540,AT4G14020,AT2G18050,AT4G01250,AT1G22930,AT1G26380,AT5G39020,AT1G59960,AT1G62810,AT3G55740,AT1G11310,AT3G05200,AT3G10500,AT5G58375,AT5G49630,AT4G02410,AT2G37760,AT1G18890,AT4G23310,AT3G16720,AT5G10290,AT5G42050,AT2G17040,AT1G25390,AT1G21670,AT1G74590,AT4G27300,AT5G20830,AT1G13110,AT2G30210,AT4G01870,AT2G31110,AT1G48210,AT5G35735,AT5G20400,AT3G13650,AT5G37540,AT1G72700,AT3G52800,AT1G08450,AT1G07000,AT4G04220,AT2G43590,AT4G05020,AT1G80760,AT1G51680,AT1G70810,AT3G56200,AT4G24190,AT4G24690,AT4G31800,AT1G69270,AT2G30490,AT4G18930,AT2G37040,AT1G56650,AT4G25110,AT3G44720,AT5G02490,AT4G23200,AT1G70520,AT3G11840,AT3G44630,AT5G64410,AT2G47000,AT4G04620,AT1G74020,AT1G56430,AT5G44580,AT1G55850,AT4G36110,AT1G59870,AT4G20830,AT5G43450,AT1G69840,AT4G33040,AT3G13910,AT5G52830,AT1G19530,AT1G48320,AT5G07830,AT1G11260,AT1G69850,AT5G04340,AT5G42830,AT4G35750,AT1G71880,AT1G74460,AT2G46620,AT2G25000,AT4G29700,AT4G31980,AT3G13330,AT1G13750,AT1G24140,AT2G26400,AT5G48180,AT5G58860,AT4G26970,AT5G47120,AT3G29590,AT3G60860,AT2G17930,AT1G13990,AT4G37410,AT2G17520,AT5G63600,AT3G16450,AT3G21560,AT5G42900,AT3G55450,AT5G10180,AT2G38310,AT1G17500,AT1G18380,AT4G38550,AT2G42790,AT1G02450,AT5G46780,AT3G59660,AT4G27280,AT4G17215,AT5G10695,AT2G33830,AT1G61140,AT2G17290,AT4G21990,AT1G22180,AT3G17810,AT1G34750,AT1G66090,AT3G45140,AT4G23300,AT5G40690,AT4G09030,AT5G24810,AT1G76520,AT1G18570,AT3G63380,AT2G46500,AT3G27400,AT5G53370,AT3G47960,AT5G11970,AT3G46900,AT1G34260,AT5G59310,AT2G16700,AT2G19130,AT3G19660,AT2G36910,AT2G28930,AT5G44920,AT1G28480,AT1G52890,AT1G19250,AT2G01650,AT4G39210,AT1G55265,AT1G75820,AT2G33480,AT4G34390,AT2G22660,AT3G60450,AT1G52880,AT5G20250,AT1G65490,AT3G15990,AT2G20960,AT3G51450,AT3G15650,AT3G57520,AT3G46620,AT4G11280,AT1G27980,AT3G02040,AT3G45290,AT5G39610,AT4G35110,AT5G06530,AT5G61640,AT4G03960,AT5G06860,AT2G16060,AT5G39050,AT2G34490,AT2G27190,AT1G16670,AT4G33070,AT1G32920,AT5G04930,AT1G28230,AT2G01540,AT4G18120,AT4G23470,AT1G70140,AT5G64000,AT1G13210,AT5G54490,AT5G11670,AT5G67450,AT5G64370,AT1G35350,AT1G67310,AT1G07530,AT4G21380,AT1G09070,AT1G20510,AT4G31970,AT2G29990,AT2G41220,AT5G05730,AT4G23610,AT1G44100,AT3G14280,AT5G06320,AT5G47580,AT5G66210,AT3G25600,AT1G52400,AT3G57450,AT4G39670,AT3G17700,AT1G28580,AT1G10410,AT3G04110,AT1G30510,AT2G42890,AT2G24180,AT5G45500,AT2G44500,AT3G11820,AT1G21450,AT5G45480,AT2G44490,AT5G13930,AT1G17860,AT2G34660,AT3G10930,AT4G23850,AT5G16570,AT5G61520,AT5G53890,AT5G13420,AT2G04070,AT1G70300,AT4G12070,AT2G39350,AT4G22920,AT1G77920,AT4G39675,AT5G17050,AT5G59780,AT5G53450,AT1G42990,AT1G22070,AT4G17770,AT3G24503,AT5G24870,AT1G13260,AT5G61900,AT2G18730,AT2G33580,AT3G13310,AT2G22510,AT4G23130,AT5G54500,AT1G29860,AT5G20150,AT5G63790,AT4G23320,AT1G75170,AT1G12940,AT3G18370,AT3G48080,AT1G21750,AT1G80830,AT3G23550,AT1G55210,AT5G55050,AT1G64405,AT1G68530,AT5G52740,AT4G23210,AT1G24150,AT4G03450,AT3G49530,AT1G35190,AT2G31390,AT3G09390,AT4G16860,AT5G64570,AT3G29240,AT5G15870,AT2G18960,AT3G55270,AT2G14900,AT4G23990,AT2G47160,AT4G27900,AT1G32450,AT5G45110,AT3G62420,AT5G49760,AT2G05940,AT5G54960,AT2G43530,AT5G02290,AT4G19880,AT5G07100,AT1G33440,AT1G07610,AT3G28850,AT3G22120,AT5G66250,AT3G06860,AT3G50260,AT5G57710,AT1G03060,AT4G21980,AT1G69720,AT4G35600,AT2G06050,AT1G72680,AT5G43060,AT1G62790,AT1G28380,AT2G46600,AT5G18780,AT3G53230,AT1G80440,AT5G06750,AT3G52190,AT1G23230,AT2G40000,AT3G07870,AT3G57530,AT5G25770,AT1G19610,AT4G25900,AT5G61600,AT1G76600,AT4G04830,AT4G33980,AT3G12740,AT1G09430,AT1G37130,AT4G12010,AT3G53280,AT3G09270,AT1G25275,AT1G67940,AT1G53280,AT1G60140,AT2G17130,AT1G34370,AT2G01680,AT4G37310,AT2G23450,AT1G75810,AT2G34960,AT4G29900,AT2G39480,AT2G14560,AT5G13800,AT1G32230,AT1G17020,AT4G08780,AT2G15390,AT2G17760,AT3G51130,AT3G28940,AT1G54130,AT5G52640,AT4G23690,AT3G28950,AT1G77120,AT2G01670,AT5G27600,AT3G49490,AT1G67980,AT2G05380,AT5G44790,AT2G25625,AT5G54860,AT1G22400,AT1G21550,AT4G22780,AT1G76390,AT4G17070,AT2G02370,AT5G18170,AT4G08470,AT1G30110,AT5G63560,AT1G54030,AT4G26910,AT3G46110,AT5G47220,AT4G16370,AT3G10800,AT3G56240,AT4G26060,AT1G76360,AT3G54640,AT1G63720,AT1G19360,AT4G19860,AT5G36930,AT4G02590,AT3G12580,AT3G50950,AT4G17030,AT3G25780,AT4G30640,AT2G15080,AT4G34150,AT2G31960,AT4G32300,AT3G18290,AT2G17120,AT1G69450,AT5G18490,AT3G21630,AT2G29460,AT4G30600,AT2G29340,AT2G28400,AT1G15430,AT5G23110,AT5G45000,AT5G63190,AT1G32640,AT5G45800,AT5G08240,AT5G01850,AT1G67810,AT1G30400,AT5G39030,AT1G30270,AT5G51830,AT4G38340,AT1G67800,AT3G27300,AT1G25280,AT2G04400,AT5G01820,AT3G09020,AT5G67330,AT3G16470,AT4G14465,AT1G32790,AT3G56950,AT1G03740,AT1G79000,AT3G46440,AT5G17380,AT5G56500,AT4G26270,AT1G72300,AT1G50740,AT2G46400,AT3G61190,AT1G80450,AT4G18910,AT2G35680,AT4G30110,AT5G24430,AT4G10120,AT3G26510,AT4G16190,AT3G21690,AT4G36760,AT1G67850,AT2G02800,AT5G48485,AT5G61210,AT5G22250,AT4G12300,AT5G44390,AT5G23850,AT5G11250,AT5G63760,AT1G53430,AT3G09010,AT4G24120,AT3G15630,AT1G32460,AT3G17410,AT3G24900,AT1G71040,AT5G49570,AT5G66490,AT2G27150,AT1G72920,AT2G39400,AT5G50380,AT2G39310,AT2G18680,AT4G04610,AT2G24160,AT1G80460,AT3G10420,AT1G15890,AT3G06300,AT5G44400,AT3G57700,AT1G03290,AT3G21230,AT1G17420,AT1G33590,AT1G63880,AT5G45130,AT3G25020,AT2G45170,AT5G24520,AT3G26590,AT3G25290,AT4G21580,AT2G11810,AT3G51430,AT3G57550,AT5G19120,AT4G30490,AT1G02900,AT3G59700,AT3G60470,AT4G29210,AT1G01420,AT2G26190,AT4G25880,AT4G34630,AT4G39270,AT4G00355,AT3G48090,AT2G46020,AT4G05390,AT5G57900,AT3G51895,AT1G07040,AT2G47730,AT2G18090,AT3G13380,AT1G17250,AT1G70160,AT5G24380,AT5G54080,AT3G16770,AT5G19550,AT1G77370,AT5G40760,AT3G19260,AT3G24550,AT1G76990,AT3G16830,AT1G67560,AT1G10390,AT5G56630,AT4G29950,AT4G02050,AT3G14430,AT1G65820,AT5G65110,AT1G48090,AT4G02360,AT5G01220,AT3G59350,AT5G46450,AT5G59490,AT2G37110,AT2G05630,AT4G33985,AT2G03530,AT2G37940,AT1G76970,AT2G05710,AT2G30870,AT2G27510,AT1G21900,AT5G15680,AT4G37870 THOMAS_OBE1I-OBE2I/WT_DN Down-regulated expressed in the obe1i obe2i mutant seedlings when compared to wild type (Table S2 PubmedID:19392692) AT3G05800,AT5G02120,AT1G75190,AT5G11450,AT4G27700,AT5G42070,AT5G64850,AT2G29310,AT4G32770,AT1G69200,AT1G26770,AT2G45470,AT5G55730,AT5G44650,AT2G41950,AT3G23805,AT3G10080,AT5G01015,AT1G28100,AT2G01590,AT5G50730,AT1G68590,AT2G34310,AT3G44750,AT2G29180,AT4G24930,AT5G24240,AT1G73480,AT4G37980,AT1G05385,AT3G46670,AT2G37990,AT2G02500,AT1G21350,AT3G60290,AT2G27840,AT3G05410,AT2G28740,AT1G22590,AT5G16140,AT1G59840,AT2G32640,AT5G64770,AT1G63310,AT3G20570,AT2G39920,AT5G51010,AT1G73630,AT4G09350,AT3G23830,AT1G53520,AT3G53990,AT4G19830,AT1G52510,AT2G25900,AT3G52920,AT2G37640,AT5G59350,AT5G47190,AT4G38100,AT2G39850,AT3G18000,AT5G40380,AT1G68780,AT1G18730,AT3G29030,AT2G44860,AT2G35190,AT2G04039,AT1G78170,AT1G31860,AT4G28025,AT1G20810,AT5G22430,AT5G52970,AT3G26710,AT1G64370,AT4G17460,AT1G77090,AT5G03940,AT4G09730,AT1G69160,AT1G17880,AT4G14870,AT2G21385,AT1G14280,AT3G56650,AT1G50450,AT1G49975,AT3G27050,AT1G16810,AT3G63190,AT1G11545,AT2G46910,AT1G14150,AT3G56160,AT5G06270,AT2G18890,AT2G03710,AT3G55420,AT2G24060,AT4G24750,AT3G05890,AT1G29450,AT2G38750,AT1G77490,AT2G33450,AT2G23610,AT4G14560,AT5G02760,AT5G50100,AT2G24020,AT2G40435,AT4G02530,AT5G03120,AT2G29290,AT5G48790,AT3G13740,AT4G23800,AT1G07070,AT3G53900,AT1G15580,AT2G34640,AT2G31070,AT1G53670,AT1G44000,AT1G48100,AT5G55220,AT5G60890,AT2G22990,AT4G39040,AT1G10370,AT5G56710,AT3G56290,AT1G20190,AT4G26790,AT4G28660,AT1G74070,AT5G25460,AT1G02280,AT1G18650,AT2G44740,AT2G04780,AT2G03350,AT1G18060,AT2G21650,AT4G34760,AT4G12730,AT1G29440,AT2G45860,AT3G61210,AT4G22570,AT3G27160,AT5G25360,AT3G28007,AT2G42190,AT2G31410,AT2G33250,AT4G09010,AT1G12520,AT4G16155,AT5G66590,AT2G39470,AT2G35960,AT1G18360,AT4G29610,AT3G01440,AT3G06035,AT1G70200,AT2G40400,AT5G01790,AT4G17560,AT5G45930,AT5G08050,AT2G32860,AT3G12110,AT5G56950,ATCG00790,AT1G19450,AT4G30620,AT5G44680,AT4G03060,AT1G02820,AT5G12050,AT2G43560,AT1G64390,AT3G61260,AT5G52100,AT2G40610,AT1G64640,AT1G04240,AT1G69030,AT4G34090,AT3G10940,AT3G51870,AT1G17650,AT1G04420,AT1G80050,AT1G36390,AT5G07690,AT4G28780,AT5G45670,AT1G49500,AT2G22980,AT5G22640,AT2G33330,AT5G14660,AT1G74890,AT2G45820,AT4G23750,AT4G15660,AT3G15680,AT5G27290,AT3G48100,AT4G12970,AT5G22390,AT3G16250,AT1G29500,ATCG00660,AT5G48900,AT1G26920,ATCG01120,AT2G28470,AT2G28190,AT4G30610,AT3G48460,AT2G33180,AT2G34620,AT4G11175,AT1G62780,AT1G75250,AT5G50915,AT3G01960,AT5G51720,AT5G43750,AT2G43550,AT5G45040,AT5G46690,AT2G36885,AT5G19220,AT1G75690,AT2G42220,AT3G17170,AT5G03760,AT4G32330,AT2G03420,AT4G34730,AT3G15520,AT1G72970,AT5G45950,AT5G22880,AT2G37470,AT1G54040,AT4G39970,AT3G21670,AT5G54630,ATCG00050,AT5G15310,AT3G48420,AT3G09540,AT4G12980,AT3G21950,AT5G20740,AT3G05640,AT2G20870,AT1G70760,AT3G52040,AT2G32500,AT3G09210,AT5G45820,AT3G06070,AT3G27360,AT5G65730,AT1G76450,AT5G57345,AT1G14700,AT5G18060,AT5G52960,AT1G55370,AT2G17972,AT4G18970,AT1G69523,AT4G32280,AT4G37800,AT1G29510,AT5G24150,AT5G16030,AT4G15690,AT1G06080,AT2G01870,AT2G36870,AT4G00880,AT1G54410,ATCG00600,AT2G28720,AT3G26960,AT4G36540,AT1G02205,AT3G57040,AT1G51100,AT5G39860,AT4G02850,AT4G04840,AT1G31690,AT2G20750,AT1G31680,AT3G62950,AT5G62920,AT3G16000,AT1G67865,AT1G19050,AT5G18600,AT3G44990,AT1G13650 CAMP_FLU_DARK/LIGHT_UP Down-regulated specifically in flu after paraquat (Table S2 PubmedID:14508004) AT1G51780,AT5G22630,AT3G14050,AT1G19300,AT4G39830,AT4G22590,AT4G35630,AT1G05010,AT3G57880,AT5G17990,AT4G38560,AT2G46510,AT4G36990,AT1G63840,AT4G31770,AT5G62470,AT5G60800,AT5G51070,AT2G46500,AT5G43380,AT1G76970,AT1G17340,AT3G01830,AT4G26080,AT5G13200,AT5G25440,AT5G18470,AT1G76040,AT2G05940,AT3G55950,AT2G33580,AT5G62570,AT1G18890,AT5G24430,AT2G43290,AT2G31880,AT5G37770,AT1G51660,AT1G19970,AT4G31500,AT2G20145,AT5G45110,AT4G23610,AT5G64870,AT2G31870,AT3G10300,AT2G22500,AT4G39030,AT4G35180,AT1G71330,AT5G04930,AT4G21850,AT2G42760,AT3G61190,AT1G09070,AT3G50910,AT2G43320,AT5G64310,AT3G06890,AT1G22180,AT3G07390,AT3G11880,AT1G07630,AT4G02330,AT4G02550,AT1G26270,AT5G19240,AT5G17350,AT2G41010,AT1G66180 CAMP_FLU_DARK/LIGHT_PARAQUAT_UP Up-regulated specifically in flu after both dark/light shift and paraquat treatmenta (Table S3 PubmedID:14508004) AT1G21110,AT2G36790,AT1G55920,AT5G59820,AT2G37430,AT5G47230,AT1G26800,AT5G54490,AT4G21390,AT1G66400,AT3G62260,AT1G76690,AT3G26200,AT4G24570,AT3G62150,AT2G22880,AT1G05575,AT3G02840,AT5G14730,AT1G76600,AT4G01870,AT2G21640,AT2G26530,AT2G25735,AT1G69890,AT1G57990,AT3G02800,AT5G40460,AT2G35930,AT3G20340,AT1G03220 CAMP_FLU_PARAQUAT-TREATMENTA_UP Up-regulated specifically in flu after paraquat treatmenta (Table S3 PubmedID:14508004) AT3G49160,AT1G71030,AT4G21870,AT5G01600,AT2G40300,AT3G12320,AT5G06980,AT5G51720,AT5G20150 DINNENY_48HRS_FE-DEPRIVATION_UP Significant up-regulation in 48hrs in response to iron-deprivation (Table S2 PubmedID:18436742) AT1G02500,AT1G03470,AT1G09560,AT1G19850,AT1G23020,AT1G28130,AT1G34760,AT1G47400,AT1G51680,AT1G56160,AT1G56430,AT1G64980,AT1G73120,AT1G74760,AT1G80360,AT2G05830,AT2G24180,AT2G31350,AT2G39200,AT2G40890,AT2G41730,AT2G42750,AT2G43570,AT2G43610,AT3G02480,AT3G07720,AT3G08590,AT3G12740,AT3G12820,AT3G12900,AT3G12920,AT3G13610,AT3G18280,AT3G18290,AT3G19580,AT3G21240,AT3G27060,AT3G46900,AT3G47640,AT3G48450,AT3G50740,AT3G51000,AT3G51670,AT3G52880,AT3G53260,AT3G53480,AT3G56360,AT3G56980,AT3G58060,AT3G58810,AT3G61930,AT4G02330,AT4G11650,AT4G15910,AT4G16370,AT4G19690,AT4G25700,AT4G29900,AT4G30210,AT4G31940,AT5G02780,AT5G03570,AT5G04150,AT5G04950,AT5G05250,AT5G13740,AT5G24660,AT5G24800,AT5G25830,AT5G25840,AT5G36890,AT5G38820,AT5G47910,AT5G53450,AT5G66120,AT5G67330,AT5G67370,AT1G01480,AT1G02220,AT1G02750,AT1G02850,AT1G03280,AT1G03660,AT1G03820,AT1G03860,AT1G04770,AT1G05010,AT1G05060,AT1G06550,AT1G06840,AT1G07500,AT1G09080,AT1G09100,AT1G09790,AT1G10170,AT1G10990,AT1G11870,AT1G12030,AT1G12050,AT1G16150,AT1G17530,AT1G17960,AT1G18390,AT1G18570,AT1G18830,AT1G18890,AT1G18910,AT1G19020,AT1G19110,AT1G19180,AT1G19250,AT1G20100,AT1G20696,AT1G21120,AT1G21130,AT1G22510,AT1G22885,AT1G22930,AT1G24090,AT1G25275,AT1G26380,AT1G26410,AT1G26420,AT1G29940,AT1G31420,AT1G32870,AT1G32920,AT1G33110,AT1G33790,AT1G36180,AT1G42990,AT1G43800,AT1G43910,AT1G48320,AT1G49000,AT1G49050,AT1G49430,AT1G49960,AT1G51690,AT1G51730,AT1G51890,AT1G51920,AT1G55360,AT1G55740,AT1G55780,AT1G56320,AT1G56580,AT1G60610,AT1G60730,AT1G61560,AT1G62180,AT1G62420,AT1G63440,AT1G65500,AT1G65510,AT1G65690,AT1G65840,AT1G66880,AT1G67120,AT1G67750,AT1G67800,AT1G67810,AT1G68850,AT1G68880,AT1G70560,AT1G71100,AT1G71400,AT1G74450,AT1G74590,AT1G74770,AT1G76550,AT1G77120,AT1G77280,AT1G77670,AT1G77760,AT1G78340,AT1G80180,AT2G01470,AT2G02850,AT2G03760,AT2G03820,AT2G04040,AT2G04050,AT2G04400,AT2G05940,AT2G14260,AT2G15830,AT2G16060,AT2G16900,AT2G17220,AT2G17760,AT2G18370,AT2G18690,AT2G19590,AT2G20390,AT2G20800,AT2G20920,AT2G21640,AT2G21790,AT2G21940,AT2G22250,AT2G23170,AT2G23270,AT2G23320,AT2G25910,AT2G26210,AT2G26300,AT2G28570,AT2G29340,AT2G29980,AT2G30140,AT2G30250,AT2G30490,AT2G30750,AT2G31200,AT2G32020,AT2G32720,AT2G35380,AT2G35750,AT2G36460,AT2G36850,AT2G36930,AT2G37040,AT2G37410,AT2G38470,AT2G38530,AT2G38860,AT2G39350,AT2G39650,AT2G39700,AT2G39870,AT2G40010,AT2G40370,AT2G41480,AT2G41500,AT2G42680,AT2G43000,AT2G43290,AT2G43620,AT2G44370,AT2G45290,AT2G45590,AT2G46230,AT2G47000,AT2G47060,AT2G47130,AT2G47200,AT2G47260,AT2G47520,AT2G47710,AT3G01350,AT3G01490,AT3G01860,AT3G02360,AT3G02550,AT3G03270,AT3G03380,AT3G03950,AT3G06890,AT3G08040,AT3G10040,AT3G10050,AT3G10190,AT3G10340,AT3G10720,AT3G11750,AT3G12700,AT3G13330,AT3G13460,AT3G13580,AT3G15300,AT3G17465,AT3G18250,AT3G18560,AT3G19520,AT3G21720,AT3G22370,AT3G23570,AT3G24450,AT3G25250,AT3G25610,AT3G26470,AT3G26830,AT3G27150,AT3G27220,AT3G27280,AT3G27570,AT3G27580,AT3G27880,AT3G28210,AT3G28480,AT3G43190,AT3G44540,AT3G44550,AT3G44720,AT3G47420,AT3G47730,AT3G47780,AT3G49530,AT3G50400,AT3G50660,AT3G50910,AT3G50930,AT3G51200,AT3G51600,AT3G51860,AT3G52140,AT3G53150,AT3G53230,AT3G53280,AT3G53810,AT3G54640,AT3G55270,AT3G55980,AT3G56880,AT3G57090,AT3G59280,AT3G59820,AT3G59910,AT3G61410,AT4G03320,AT4G04610,AT4G05200,AT4G08850,AT4G09110,AT4G09830,AT4G10510,AT4G12910,AT4G13235,AT4G14020,AT4G14365,AT4G14630,AT4G15420,AT4G16830,AT4G17260,AT4G17670,AT4G18880,AT4G19160,AT4G19370,AT4G19810,AT4G21490,AT4G23190,AT4G24690,AT4G25880,AT4G26110,AT4G26270,AT4G26470,AT4G26870,AT4G27450,AT4G27940,AT4G29020,AT4G29190,AT4G29220,AT4G29780,AT4G30140,AT4G31290,AT4G33020,AT4G33070,AT4G33910,AT4G34230,AT4G34710,AT4G35220,AT4G35830,AT4G36010,AT4G36980,AT4G36990,AT4G37370,AT4G39740,AT4G39980,AT5G01490,AT5G02580,AT5G05730,AT5G05960,AT5G06330,AT5G06860,AT5G07010,AT5G07030,AT5G07390,AT5G07800,AT5G09270,AT5G09290,AT5G09570,AT5G09590,AT5G10695,AT5G11210,AT5G12040,AT5G12310,AT5G13200,AT5G13910,AT5G14730,AT5G14800,AT5G14920,AT5G15120,AT5G16750,AT5G17010,AT5G17760,AT5G17990,AT5G18110,AT5G18270,AT5G18470,AT5G19550,AT5G20910,AT5G22270,AT5G24690,AT5G24760,AT5G25440,AT5G25930,AT5G26920,AT5G27540,AT5G37740,AT5G38900,AT5G39050,AT5G39580,AT5G39890,AT5G40590,AT5G40690,AT5G40760,AT5G41790,AT5G42050,AT5G42740,AT5G42830,AT5G42960,AT5G43450,AT5G44730,AT5G45070,AT5G45080,AT5G45340,AT5G47370,AT5G47870,AT5G47880,AT5G48380,AT5G48930,AT5G50870,AT5G51160,AT5G51440,AT5G51460,AT5G51510,AT5G51830,AT5G52640,AT5G53420,AT5G53590,AT5G53850,AT5G54640,AT5G54960,AT5G55180,AT5G55200,AT5G55620,AT5G56090,AT5G56350,AT5G57220,AT5G58070,AT5G58620,AT5G58650,AT5G59140,AT5G59320,AT5G59440,AT5G59820,AT5G61010,AT5G62190,AT5G62390,AT5G62480,AT5G62520,AT5G63990,AT5G64890,AT5G64905,AT5G65720,AT5G66070,AT5G66690,AT5G66985,AT5G67430,AT1G53310,AT2G19740,AT2G25980,AT3G22620,AT4G22890,AT5G09520,AT5G20890,AT5G22630,AT5G47210,AT1G01120,AT1G01490,AT1G01610,AT1G01630,AT1G04080,AT1G04220,AT1G04810,AT1G04850,AT1G05340,AT1G05680,AT1G07830,AT1G09840,AT1G14360,AT1G14540,AT1G15780,AT1G15920,AT1G16160,AT1G17180,AT1G18450,AT1G18850,AT1G19130,AT1G20430,AT1G20960,AT1G21670,AT1G22410,AT1G22890,AT1G25280,AT1G25530,AT1G27650,AT1G27730,AT1G27770,AT1G28280,AT1G28290,AT1G28395,AT1G28680,AT1G29340,AT1G30700,AT1G32130,AT1G32440,AT1G33410,AT1G33990,AT1G34260,AT1G34670,AT1G45000,AT1G48850,AT1G49600,AT1G49820,AT1G50740,AT1G51420,AT1G52980,AT1G54830,AT1G55450,AT1G55840,AT1G62390,AT1G63290,AT1G64040,AT1G64160,AT1G65820,AT1G69040,AT1G69920,AT1G70490,AT1G70530,AT1G71730,AT1G72750,AT1G73490,AT1G74360,AT1G74460,AT1G74790,AT1G75660,AT1G77440,AT1G77710,AT1G77840,AT1G78090,AT1G79210,AT1G79390,AT1G79830,AT1G80530,AT2G01100,AT2G02100,AT2G02390,AT2G02810,AT2G04900,AT2G11520,AT2G15000,AT2G16500,AT2G18390,AT2G19540,AT2G20060,AT2G20580,AT2G20960,AT2G21100,AT2G22510,AT2G23540,AT2G23810,AT2G24200,AT2G24500,AT2G25110,AT2G26230,AT2G26240,AT2G27920,AT2G29400,AT2G31060,AT2G33340,AT2G35770,AT2G35930,AT2G36880,AT2G37360,AT2G38110,AT2G38290,AT2G38770,AT2G41410,AT2G41540,AT2G41630,AT2G42790,AT2G43970,AT2G45400,AT2G46750,AT2G48140,AT3G01120,AT3G03640,AT3G04370,AT3G04640,AT3G05120,AT3G06350,AT3G07160,AT3G07270,AT3G07640,AT3G07910,AT3G08640,AT3G08760,AT3G08970,AT3G09100,AT3G09440,AT3G09840,AT3G09900,AT3G10500,AT3G11430,AT3G11830,AT3G12520,AT3G12670,AT3G13670,AT3G14470,AT3G15180,AT3G15980,AT3G16030,AT3G16310,AT3G18860,AT3G19010,AT3G19170,AT3G19200,AT3G23280,AT3G23580,AT3G23830,AT3G25900,AT3G26910,AT3G27270,AT3G28940,AT3G47810,AT3G47990,AT3G48410,AT3G48890,AT3G52230,AT3G52400,AT3G53510,AT3G53970,AT3G54010,AT3G55360,AT3G56400,AT3G58680,AT3G62580,AT3G62600,AT4G02860,AT4G02880,AT4G03080,AT4G04470,AT4G08980,AT4G09100,AT4G11240,AT4G11420,AT4G12720,AT4G12790,AT4G14440,AT4G14615,AT4G14680,AT4G14800,AT4G15900,AT4G17215,AT4G17280,AT4G17490,AT4G17640,AT4G20390,AT4G21110,AT4G23850,AT4G24130,AT4G24140,AT4G24380,AT4G24820,AT4G25320,AT4G25900,AT4G27280,AT4G28460,AT4G29040,AT4G30120,AT4G30930,AT4G31180,AT4G31330,AT4G32060,AT4G32910,AT4G33780,AT4G34460,AT4G34630,AT4G36610,AT4G38130,AT4G39940,AT5G01870,AT5G01950,AT5G02490,AT5G02790,AT5G03030,AT5G04600,AT5G06360,AT5G07130,AT5G09480,AT5G09530,AT5G11890,AT5G11920,AT5G12420,AT5G13010,AT5G13190,AT5G13580,AT5G13900,AT5G14130,AT5G14520,AT5G15870,AT5G18400,AT5G18900,AT5G19330,AT5G19410,AT5G19590,AT5G20520,AT5G20920,AT5G22790,AT5G23190,AT5G23540,AT5G23900,AT5G24810,AT5G26820,AT5G27420,AT5G35580,AT5G37690,AT5G38280,AT5G39040,AT5G40170,AT5G40660,AT5G40770,AT5G41040,AT5G41670,AT5G42150,AT5G43460,AT5G44550,AT5G46050,AT5G47120,AT5G48540,AT5G50850,AT5G53350,AT5G54490,AT5G54670,AT5G54860,AT5G56150,AT5G57990,AT5G58510,AT5G58860,AT5G60710,AT5G61250,AT5G62050,AT5G62630,AT5G64760,AT5G65670,AT5G66140,AT5G67130 DINNENY_48HRS_FE-DEPRIVATION_DN Significant down-regulation in 48hrs in response to iron-deprivation (Table S2 PubmedID:18436742) AT4G21870,AT4G25220,AT4G26010,AT5G64100,AT5G67400,AT1G08090,AT1G13420,AT1G34510,AT2G32270,AT2G41810,AT2G43890,AT3G25190,AT3G49960,AT5G01600,AT5G57530,AT1G54970,AT4G08410,AT1G01750,AT1G03870,AT1G05300,AT1G12040,AT1G12080,AT1G12240,AT1G12560,AT1G13080,AT1G14960,AT1G16370,AT1G16390,AT1G17190,AT1G19900,AT1G20450,AT1G30380,AT1G30870,AT1G31330,AT1G43160,AT1G48500,AT1G53940,AT1G58290,AT1G60960,AT1G61520,AT1G62510,AT1G62980,AT1G63450,AT1G65310,AT1G70850,AT1G70890,AT1G71500,AT1G74470,AT1G75780,AT1G79040,AT2G03720,AT2G20520,AT2G20750,AT2G21880,AT2G23620,AT2G24580,AT2G25160,AT2G25240,AT2G29750,AT2G30930,AT2G33790,AT2G34180,AT2G34810,AT2G36830,AT2G36885,AT2G37130,AT2G38750,AT2G39040,AT2G42850,AT2G43535,AT3G09220,AT3G10710,AT3G16240,AT3G16350,AT3G18170,AT3G20510,AT3G22570,AT3G43960,AT3G45700,AT3G45710,AT3G46700,AT3G48740,AT3G57020,AT3G59340,AT3G59370,AT3G61430,AT3G62680,AT4G00430,AT4G00680,AT4G01070,AT4G01630,AT4G02270,AT4G04770,AT4G08390,AT4G11190,AT4G11210,AT4G12550,AT4G13390,AT4G15290,AT4G17340,AT4G18430,AT4G21850,AT4G22212,AT4G22460,AT4G22610,AT4G25250,AT4G25820,AT4G26320,AT4G27410,AT4G30170,AT4G30320,AT4G33730,AT4G33790,AT4G34580,AT4G35090,AT4G37610,AT4G40090,AT5G05600,AT5G15180,AT5G15600,AT5G22410,AT5G23840,AT5G24140,AT5G35190,AT5G40510,AT5G43580,AT5G44130,AT5G47450,AT5G47560,AT5G47950,AT5G47980,AT5G47990,AT5G48000,AT5G48010,AT5G54040,AT5G56540,AT5G56870,AT5G59150,AT5G60660,AT5G66170,AT3G50350,AT1G70830,AT1G79320,AT2G30040,AT3G18450,AT3G26570,AT4G25830,AT4G26220,AT4G28850,AT4G31320,AT5G13630,AT5G26010,AT5G43360,AT5G47740 DINNENY_72HRS_FE-DEPRIVATION_UP Significant up-regulation in 72hrs in response to iron-deprivation (Table S2 PubmedID:18436742) AT1G02500,AT1G03470,AT1G09560,AT1G19850,AT1G23020,AT1G28130,AT1G34760,AT1G47400,AT1G51680,AT1G56160,AT1G56430,AT1G64980,AT1G73120,AT1G74760,AT1G80360,AT2G05830,AT2G24180,AT2G31350,AT2G39200,AT2G40890,AT2G41730,AT2G42750,AT2G43570,AT2G43610,AT3G02480,AT3G07720,AT3G08590,AT3G12740,AT3G12820,AT3G12900,AT3G12920,AT3G13610,AT3G18280,AT3G18290,AT3G19580,AT3G21240,AT3G27060,AT3G46900,AT3G47640,AT3G48450,AT3G50740,AT3G51000,AT3G51670,AT3G52880,AT3G53260,AT3G53480,AT3G56360,AT3G56980,AT3G58060,AT3G58810,AT3G61930,AT4G02330,AT4G11650,AT4G15910,AT4G16370,AT4G19690,AT4G25700,AT4G29900,AT4G30210,AT4G31940,AT5G02780,AT5G03570,AT5G04150,AT5G04950,AT5G05250,AT5G13740,AT5G24660,AT5G24800,AT5G25830,AT5G25840,AT5G36890,AT5G38820,AT5G47910,AT5G53450,AT5G66120,AT5G67330,AT5G67370,AT1G01480,AT1G02220,AT1G02750,AT1G02850,AT1G03280,AT1G03660,AT1G03820,AT1G03860,AT1G04770,AT1G05010,AT1G05060,AT1G06550,AT1G06840,AT1G07500,AT1G09080,AT1G09100,AT1G09790,AT1G10170,AT1G10990,AT1G11870,AT1G12030,AT1G12050,AT1G16150,AT1G17530,AT1G17960,AT1G18390,AT1G18570,AT1G18830,AT1G18890,AT1G18910,AT1G19020,AT1G19110,AT1G19180,AT1G19250,AT1G20100,AT1G20696,AT1G21120,AT1G21130,AT1G22510,AT1G22885,AT1G22930,AT1G24090,AT1G25275,AT1G26380,AT1G26410,AT1G26420,AT1G29940,AT1G31420,AT1G32870,AT1G32920,AT1G33110,AT1G33790,AT1G36180,AT1G42990,AT1G43800,AT1G43910,AT1G48320,AT1G49000,AT1G49050,AT1G49430,AT1G49960,AT1G51690,AT1G51730,AT1G51890,AT1G51920,AT1G55360,AT1G55740,AT1G55780,AT1G56320,AT1G56580,AT1G60610,AT1G60730,AT1G61560,AT1G62180,AT1G62420,AT1G63440,AT1G65500,AT1G65510,AT1G65690,AT1G65840,AT1G66880,AT1G67120,AT1G67750,AT1G67800,AT1G67810,AT1G68850,AT1G68880,AT1G70560,AT1G71100,AT1G71400,AT1G74450,AT1G74590,AT1G74770,AT1G76550,AT1G77120,AT1G77280,AT1G77670,AT1G77760,AT1G78340,AT1G80180,AT2G01470,AT2G02850,AT2G03760,AT2G03820,AT2G04040,AT2G04050,AT2G04400,AT2G05940,AT2G14260,AT2G15830,AT2G16060,AT2G16900,AT2G17220,AT2G17760,AT2G18370,AT2G18690,AT2G19590,AT2G20390,AT2G20800,AT2G20920,AT2G21640,AT2G21790,AT2G21940,AT2G22250,AT2G23170,AT2G23270,AT2G23320,AT2G25910,AT2G26210,AT2G26300,AT2G28570,AT2G29340,AT2G29980,AT2G30140,AT2G30250,AT2G30490,AT2G30750,AT2G31200,AT2G32020,AT2G32720,AT2G35380,AT2G35750,AT2G36460,AT2G36850,AT2G36930,AT2G37040,AT2G37410,AT2G38470,AT2G38530,AT2G38860,AT2G39350,AT2G39650,AT2G39700,AT2G39870,AT2G40010,AT2G40370,AT2G41480,AT2G41500,AT2G42680,AT2G43000,AT2G43290,AT2G43620,AT2G44370,AT2G45290,AT2G45590,AT2G46230,AT2G47000,AT2G47060,AT2G47130,AT2G47200,AT2G47260,AT2G47520,AT2G47710,AT3G01350,AT3G01490,AT3G01860,AT3G02360,AT3G02550,AT3G03270,AT3G03380,AT3G03950,AT3G06890,AT3G08040,AT3G10040,AT3G10050,AT3G10190,AT3G10340,AT3G10720,AT3G11750,AT3G12700,AT3G13330,AT3G13460,AT3G13580,AT3G15300,AT3G17465,AT3G18250,AT3G18560,AT3G19520,AT3G21720,AT3G22370,AT3G23570,AT3G24450,AT3G25250,AT3G25610,AT3G26470,AT3G26830,AT3G27150,AT3G27220,AT3G27280,AT3G27570,AT3G27580,AT3G27880,AT3G28210,AT3G28480,AT3G43190,AT3G44540,AT3G44550,AT3G44720,AT3G47420,AT3G47730,AT3G47780,AT3G49530,AT3G50400,AT3G50660,AT3G50910,AT3G50930,AT3G51200,AT3G51600,AT3G51860,AT3G52140,AT3G53150,AT3G53230,AT3G53280,AT3G53810,AT3G54640,AT3G55270,AT3G55980,AT3G56880,AT3G57090,AT3G59280,AT3G59820,AT3G59910,AT3G61410,AT4G03320,AT4G04610,AT4G05200,AT4G08850,AT4G09110,AT4G09830,AT4G10510,AT4G12910,AT4G13235,AT4G14020,AT4G14365,AT4G14630,AT4G15420,AT4G16830,AT4G17260,AT4G17670,AT4G18880,AT4G19160,AT4G19370,AT4G19810,AT4G21490,AT4G23190,AT4G24690,AT4G25880,AT4G26110,AT4G26270,AT4G26470,AT4G26870,AT4G27450,AT4G27940,AT4G29020,AT4G29190,AT4G29220,AT4G29780,AT4G30140,AT4G31290,AT4G33020,AT4G33070,AT4G33910,AT4G34230,AT4G34710,AT4G35220,AT4G35830,AT4G36010,AT4G36980,AT4G36990,AT4G37370,AT4G39740,AT4G39980,AT5G01490,AT5G02580,AT5G05730,AT5G05960,AT5G06330,AT5G06860,AT5G07010,AT5G07030,AT5G07390,AT5G07800,AT5G09270,AT5G09290,AT5G09570,AT5G09590,AT5G10695,AT5G11210,AT5G12040,AT5G12310,AT5G13200,AT5G13910,AT5G14730,AT5G14800,AT5G14920,AT5G15120,AT5G16750,AT5G17010,AT5G17760,AT5G17990,AT5G18110,AT5G18270,AT5G18470,AT5G19550,AT5G20910,AT5G22270,AT5G24690,AT5G24760,AT5G25440,AT5G25930,AT5G26920,AT5G27540,AT5G37740,AT5G38900,AT5G39050,AT5G39580,AT5G39890,AT5G40590,AT5G40690,AT5G40760,AT5G41790,AT5G42050,AT5G42740,AT5G42830,AT5G42960,AT5G43450,AT5G44730,AT5G45070,AT5G45080,AT5G45340,AT5G47370,AT5G47870,AT5G47880,AT5G48380,AT5G48930,AT5G50870,AT5G51160,AT5G51440,AT5G51460,AT5G51510,AT5G51830,AT5G52640,AT5G53420,AT5G53590,AT5G53850,AT5G54640,AT5G54960,AT5G55180,AT5G55200,AT5G55620,AT5G56090,AT5G56350,AT5G57220,AT5G58070,AT5G58620,AT5G58650,AT5G59140,AT5G59320,AT5G59440,AT5G59820,AT5G61010,AT5G62190,AT5G62390,AT5G62480,AT5G62520,AT5G63990,AT5G64890,AT5G64905,AT5G65720,AT5G66070,AT5G66690,AT5G66985,AT5G67430,AT1G19240,AT1G08620,AT1G11130,AT1G12200,AT1G23040,AT1G24430,AT1G50590,AT1G62770,AT1G63090,AT1G64170,AT1G67100,AT1G68820,AT1G72900,AT1G79610,AT1G80820,AT2G18360,AT2G19970,AT2G19990,AT2G34340,AT2G37340,AT2G39380,AT2G40880,AT3G01420,AT3G07800,AT3G09830,AT3G14060,AT3G15650,AT3G17611,AT3G22120,AT3G45730,AT3G55620,AT3G58550,AT3G61630,AT3G61830,AT4G13195,AT4G13345,AT4G13770,AT4G18910,AT4G24110,AT4G26200,AT4G26890,AT4G27150,AT4G34040,AT4G34950,AT4G36700,AT5G16570,AT5G22500,AT5G24530,AT5G25460,AT5G33290,AT5G39850,AT5G43330,AT5G46710,AT5G48850,AT5G49630,AT5G54390,AT5G63560,AT5G65640 DINNENY_72HRS_FE-DEPRIVATION_DN Significant down-regulation in 72hrs in response to iron-deprivation (Table S2 PubmedID:18436742) AT4G21870,AT4G25220,AT4G26010,AT5G64100,AT5G67400,AT1G08090,AT1G13420,AT1G34510,AT2G32270,AT2G41810,AT2G43890,AT3G25190,AT3G49960,AT5G01600,AT5G57530,AT1G54970,AT4G08410,AT1G01750,AT1G03870,AT1G05300,AT1G12040,AT1G12080,AT1G12240,AT1G12560,AT1G13080,AT1G14960,AT1G16370,AT1G16390,AT1G17190,AT1G19900,AT1G20450,AT1G30380,AT1G30870,AT1G31330,AT1G43160,AT1G48500,AT1G53940,AT1G58290,AT1G60960,AT1G61520,AT1G62510,AT1G62980,AT1G63450,AT1G65310,AT1G70850,AT1G70890,AT1G71500,AT1G74470,AT1G75780,AT1G79040,AT2G03720,AT2G20520,AT2G20750,AT2G21880,AT2G23620,AT2G24580,AT2G25160,AT2G25240,AT2G29750,AT2G30930,AT2G33790,AT2G34180,AT2G34810,AT2G36830,AT2G36885,AT2G37130,AT2G38750,AT2G39040,AT2G42850,AT2G43535,AT3G09220,AT3G10710,AT3G16240,AT3G16350,AT3G18170,AT3G20510,AT3G22570,AT3G43960,AT3G45700,AT3G45710,AT3G46700,AT3G48740,AT3G57020,AT3G59340,AT3G59370,AT3G61430,AT3G62680,AT4G00430,AT4G00680,AT4G01070,AT4G01630,AT4G02270,AT4G04770,AT4G08390,AT4G11190,AT4G11210,AT4G12550,AT4G13390,AT4G15290,AT4G17340,AT4G18430,AT4G21850,AT4G22212,AT4G22460,AT4G22610,AT4G25250,AT4G25820,AT4G26320,AT4G27410,AT4G30170,AT4G30320,AT4G33730,AT4G33790,AT4G34580,AT4G35090,AT4G37610,AT4G40090,AT5G05600,AT5G15180,AT5G15600,AT5G22410,AT5G23840,AT5G24140,AT5G35190,AT5G40510,AT5G43580,AT5G44130,AT5G47450,AT5G47560,AT5G47950,AT5G47980,AT5G47990,AT5G48000,AT5G48010,AT5G54040,AT5G56540,AT5G56870,AT5G59150,AT5G60660,AT5G66170,AT5G48430,AT5G06640,AT1G01620,AT1G06680,AT1G12740,AT1G13930,AT1G20440,AT1G22530,AT1G22740,AT1G22880,AT1G35720,AT1G53680,AT1G57590,AT1G58270,AT1G60950,AT1G62480,AT1G62660,AT1G68650,AT1G74020,AT1G77330,AT1G79850,AT2G23610,AT2G24980,AT2G29440,AT2G34500,AT2G39980,AT2G44110,AT2G46140,AT3G12540,AT3G14850,AT3G16460,AT3G23090,AT3G23730,AT3G26520,AT3G29250,AT3G45780,AT3G56090,AT4G04640,AT4G09990,AT4G11290,AT4G15230,AT4G25790,AT4G31470,AT5G04960,AT5G05500,AT5G06630,AT5G10170,AT5G18670,AT5G19250,AT5G19800,AT5G25810,AT5G44110,AT5G45410,AT5G47110,AT5G49360,AT5G52250,AT5G53250,AT5G57540,AT5G61650,AT5G62340,AT5G62810,AT5G63450,AT5G64120 DINNENY_ZONE1_FE-DEPRIVATION_UP Significant up-regulation in ZONE1 of longitudinal in response to iron-deprivation (Table S2 PubmedID:18436742) AT1G23020,AT1G47400,AT3G18290,AT3G56360,AT3G56980,AT4G16370,AT5G05250,AT5G53450,AT5G67330,AT5G67370 DINNENY_ZONE1_FE-DEPRIVATION_DN Significant down-regulation in ZONE1 of longitudinal in response to iron-deprivation (Table S2 PubmedID:18436742) AT2G40300,AT3G49160,AT4G08390,AT5G01600,AT3G11050 DINNENY_ZONE2_FE-DEPRIVATION_UP Significant up-regulation in ZONE2 of longitudinal in response to iron-deprivation (Table S2 PubmedID:18436742) AT2G21640,AT3G06890,AT4G19690,AT1G23020,AT1G47400,AT3G18290,AT3G56360,AT3G56980,AT4G16370,AT5G05250,AT5G53450,AT5G67330,AT5G67370 DINNENY_ZONE2_FE-DEPRIVATION_DN Significant down-regulation in ZONE2 of longitudinal in response to iron-deprivation (Table S2 PubmedID:18436742) AT2G40300,AT3G49160,AT4G08390,AT5G01600,AT4G04770 DINNENY_ZONE3_FE-DEPRIVATION_UP Significant up-regulation in ZONE3 of longitudinal in response to iron-deprivation (Table S2 PubmedID:18436742) AT1G03980,AT1G22930,AT1G28380,AT1G56430,AT1G58080,AT1G71880,AT1G72310,AT2G19410,AT3G27050,AT3G50660,AT4G19680,AT5G04720,AT5G09760,AT5G19560,AT5G21090,AT5G54670,AT1G09560,AT1G34760,AT1G49820,AT1G64980,AT1G73120,AT1G74760,AT1G77280,AT2G20030,AT2G42750,AT3G07720,AT3G11420,AT3G47640,AT3G58060,AT3G58810,AT3G61410,AT4G29780,AT4G29900,AT5G02780,AT5G03570,AT5G04150,AT5G13740,AT5G38820,AT5G61250,AT3G06890,AT4G19690,AT1G23020,AT1G47400,AT3G18290,AT3G56360,AT3G56980,AT4G16370,AT5G05250,AT5G53450,AT5G67330,AT5G67370 DINNENY_ZONE3_FE-DEPRIVATION_DN Significant down-regulation in ZONE3 of longitudinal in response to iron-deprivation (Table S2 PubmedID:18436742) AT2G40300,AT3G49160,AT4G08390,AT5G01600,AT1G58290,AT3G43670,AT2G27240,AT2G36885,AT5G60780 DINNENY_ZONE4_FE-DEPRIVATION_UP Significant up-regulation in ZONE4 of longitudinal in response to iron-deprivation (Table S2 PubmedID:18436742) AT1G01490,AT1G01570,AT1G03470,AT1G05530,AT1G07880,AT1G09790,AT1G16150,AT1G18910,AT1G19850,AT1G21670,AT1G56160,AT1G58340,AT1G60610,AT1G68560,AT1G70610,AT1G71100,AT1G78950,AT1G80190,AT1G80360,AT2G01880,AT2G02310,AT2G05830,AT2G16005,AT2G27150,AT2G35930,AT2G43610,AT2G45590,AT2G46750,AT3G01860,AT3G04110,AT3G12820,AT3G12900,AT3G12920,AT3G27580,AT3G46900,AT3G48450,AT3G50740,AT3G61930,AT4G01250,AT4G07820,AT4G09110,AT4G10510,AT4G13090,AT4G19370,AT4G24380,AT4G26890,AT4G29340,AT4G29740,AT4G30120,AT4G31940,AT5G01490,AT5G02580,AT5G04950,AT5G06490,AT5G12010,AT5G13700,AT5G22890,AT5G23170,AT5G25830,AT5G25840,AT5G26820,AT5G35580,AT5G36890,AT5G45070,AT5G50720,AT5G51160,AT5G53590,AT5G53850,AT5G58510,AT5G59480,AT5G62390,AT1G09560,AT1G34760,AT1G49820,AT1G64980,AT1G73120,AT1G74760,AT1G77280,AT2G20030,AT2G42750,AT3G07720,AT3G11420,AT3G47640,AT3G58060,AT3G58810,AT3G61410,AT4G29780,AT4G29900,AT5G02780,AT5G03570,AT5G04150,AT5G13740,AT5G38820,AT5G61250,AT3G06890,AT4G19690,AT1G23020,AT1G47400,AT3G18290,AT3G56360,AT3G56980,AT4G16370,AT5G05250,AT5G53450,AT5G67330,AT5G67370 DINNENY_ZONE4_FE-DEPRIVATION_DN Significant down-regulation in ZONE4 of longitudinal in response to iron-deprivation (Table S2 PubmedID:18436742) AT2G40300,AT3G49160,AT4G08390,AT5G01600,AT4G04770,AT1G58290,AT3G43670,AT1G21140,AT2G15620,AT2G41840,AT4G17615,AT5G04590,AT5G25350,AT5G40850,AT5G54040 DINNENY_EPI-RADIAL_FE-DEPRIVATION_UP Significant up-regulation in EPI of radial in response to iron-deprivation (Table S2 PubmedID:18436742) AT3G56980,AT2G16720,AT1G56430,AT4G37250,AT1G02360,AT1G01470,AT1G20440,AT1G60960,AT2G01850,AT4G33150,AT4G38620,AT5G59820,AT1G07610,AT1G20380,AT1G74450,AT2G01530,AT2G33580,AT3G46620,AT4G25100,AT4G33300,AT5G56870,AT1G05300,AT1G07160,AT1G07290,AT1G10560,AT1G10760,AT1G10970,AT1G12600,AT1G12780,AT1G14330,AT1G17430,AT1G19210,AT1G19450,AT1G20450,AT1G23210,AT1G44170,AT1G44318,AT1G48410,AT1G49720,AT1G52690,AT1G65570,AT1G66180,AT1G67070,AT1G69830,AT1G74010,AT1G74930,AT1G77000,AT1G80440,AT2G01420,AT2G28350,AT2G28900,AT2G38820,AT2G47980,AT3G07780,AT3G10320,AT3G19640,AT3G22910,AT3G23410,AT3G26100,AT3G29075,AT3G29430,AT3G45010,AT3G46900,AT3G46970,AT3G53720,AT3G55180,AT3G56170,AT3G61940,AT4G00750,AT4G09020,AT4G11160,AT4G12840,AT4G12910,AT4G14940,AT4G15300,AT4G15530,AT4G17940,AT4G29780,AT4G32250,AT4G33020,AT4G37890,AT5G09300,AT5G13010,AT5G14700,AT5G15450,AT5G17520,AT5G20170,AT5G23890,AT5G25110,AT5G27420,AT5G33290,AT5G38780,AT5G42380,AT5G42880,AT5G45190,AT5G47230,AT5G50400,AT5G51470,AT5G54510,AT5G56080,AT5G64860,AT5G64870 DINNENY_EPI-RADIAL_FE-DEPRIVATION_DN Significant down-regulation in EPI of radial in response to iron-deprivation (Table S2 PubmedID:18436742) AT1G76180,AT2G44120,AT4G20780,AT1G80410,AT3G07050,AT1G36370,AT2G04520,AT5G16440,AT1G25560,AT3G49840,AT4G24960,AT5G25760,AT5G48570,AT1G09020,AT1G10950,AT1G69050,AT2G23310,AT2G28520,AT3G13310,AT4G01900,AT4G04910,AT4G22330,AT5G13330,AT5G13490,AT5G52640,AT1G02140,AT1G05270,AT1G08650,AT1G09660,AT1G13590,AT1G14450,AT1G15100,AT1G15270,AT1G18580,AT1G18630,AT1G20430,AT1G20696,AT1G21190,AT1G21830,AT1G24620,AT1G26340,AT1G27090,AT1G27310,AT1G27600,AT1G27650,AT1G28250,AT1G29070,AT1G29400,AT1G29990,AT1G30110,AT1G31070,AT1G31730,AT1G33860,AT1G47200,AT1G47210,AT1G48170,AT1G48200,AT1G49410,AT1G49600,AT1G50640,AT1G52360,AT1G53380,AT1G56200,AT1G64470,AT1G64640,AT1G70190,AT1G75760,AT1G76010,AT1G77050,AT1G79000,AT1G80670,AT2G02050,AT2G04410,AT2G07340,AT2G07360,AT2G19640,AT2G20490,AT2G20750,AT2G25490,AT2G26830,AT2G27775,AT2G30330,AT2G30520,AT2G31410,AT2G36170,AT2G36460,AT2G37480,AT2G37600,AT2G38840,AT2G39130,AT2G39700,AT2G40800,AT2G41110,AT2G41310,AT2G41730,AT2G41900,AT2G42310,AT2G44790,AT2G45050,AT2G45060,AT2G45080,AT2G45640,AT2G45670,AT2G46150,AT2G46780,AT3G01390,AT3G02910,AT3G03380,AT3G04120,AT3G04730,AT3G06040,AT3G07390,AT3G07660,AT3G07810,AT3G07890,AT3G07950,AT3G10300,AT3G10525,AT3G10985,AT3G12030,AT3G12800,AT3G13235,AT3G15357,AT3G17100,AT3G18060,AT3G20630,AT3G21350,AT3G21510,AT3G23490,AT3G24050,AT3G24100,AT3G24450,AT3G27325,AT3G28950,AT3G45530,AT3G49080,AT3G49960,AT3G50590,AT3G51770,AT3G52230,AT3G52560,AT3G52640,AT3G53670,AT3G54580,AT3G54810,AT3G55020,AT3G58120,AT3G60280,AT3G60530,AT3G61110,AT3G63120,AT3G63460,AT4G01100,AT4G08280,AT4G08410,AT4G10920,AT4G12420,AT4G14320,AT4G15410,AT4G16143,AT4G16380,AT4G22220,AT4G24370,AT4G27640,AT4G27760,AT4G31080,AT4G31310,AT4G32030,AT4G32640,AT4G34290,AT4G34870,AT4G36420,AT4G36780,AT4G37660,AT4G38600,AT4G38810,AT4G39300,AT5G02260,AT5G02420,AT5G03240,AT5G06630,AT5G06640,AT5G08060,AT5G10430,AT5G11700,AT5G13030,AT5G13780,AT5G16590,AT5G18920,AT5G20700,AT5G23140,AT5G23860,AT5G24690,AT5G25890,AT5G27430,AT5G27820,AT5G28060,AT5G35430,AT5G37480,AT5G37770,AT5G39850,AT5G42860,AT5G42870,AT5G48580,AT5G48760,AT5G51440,AT5G52580,AT5G53480,AT5G54800,AT5G54830,AT5G56320,AT5G56950,AT5G58470,AT5G59510,AT5G59840,AT5G60460,AT5G61780,AT5G63150,AT5G66170 DINNENY_COL-RADIAL_FE-DEPRIVATION_DN Significant down-regulation in COL of radial in response to iron-deprivation (Table S2 PubmedID:18436742) AT1G76180,AT1G04660,AT5G05250,AT3G56980,AT1G74910,AT2G16060,AT2G26710,AT2G39770,AT4G23920 DINNENY_COR-RADIAL_FE-DEPRIVATION_UP Significant up-regulation in COR of radial in response to iron-deprivation (Table S2 PubmedID:18436742) AT4G20780,AT5G05250,AT4G16370,AT3G56980,AT4G37250,AT1G02360,AT2G22620,AT4G17220,AT1G02900,AT1G10480,AT1G12110,AT1G24440,AT1G32100,AT1G72230,AT1G72430,AT1G76560,AT2G17710,AT2G36410,AT2G39530,AT2G40750,AT2G43590,AT3G02240,AT3G12500,AT3G13650,AT4G14010,AT4G14380,AT5G42830,AT5G57785,AT1G03850,AT1G05530,AT1G07090,AT1G08990,AT1G12080,AT1G17090,AT1G20340,AT1G25450,AT1G30380,AT1G30750,AT1G30990,AT1G33055,AT1G44970,AT1G51850,AT1G61590,AT1G64380,AT1G65310,AT1G66460,AT1G71740,AT1G72120,AT2G13810,AT2G21100,AT2G21180,AT2G21820,AT2G23620,AT2G27370,AT2G28670,AT2G29995,AT2G30210,AT2G32300,AT2G36100,AT2G39410,AT2G39430,AT2G44010,AT3G11550,AT3G13910,AT3G14280,AT3G17130,AT3G18170,AT3G18450,AT3G19320,AT3G21340,AT3G22570,AT3G22600,AT3G22620,AT3G29780,AT3G46400,AT3G46760,AT3G50140,AT3G51330,AT3G52070,AT3G52920,AT3G55150,AT3G61380,AT4G00680,AT4G02090,AT4G05170,AT4G11190,AT4G12550,AT4G15400,AT4G16400,AT4G17215,AT4G18430,AT4G20820,AT4G21280,AT4G22640,AT4G23690,AT4G26320,AT4G32710,AT4G33330,AT4G33730,AT4G33790,AT4G35210,AT4G39000,AT5G03320,AT5G04150,AT5G06200,AT5G08370,AT5G10770,AT5G11540,AT5G14330,AT5G15290,AT5G17820,AT5G19970,AT5G24410,AT5G25820,AT5G35580,AT5G42180,AT5G43150,AT5G45480,AT5G45800,AT5G53320,AT5G55250,AT5G57620,AT5G58940,AT5G62420,AT5G65530,AT5G66390,AT5G67430 DINNENY_COR-RADIAL_FE-DEPRIVATION_DN Significant down-regulation in COR of radial in response to iron-deprivation (Table S2 PubmedID:18436742) AT2G44120,AT3G12580,AT1G36160,AT1G37130,AT2G01520,AT2G32510,AT4G04610,AT5G12010,AT5G41790,AT5G60790,AT1G09020,AT1G10950,AT1G69050,AT2G23310,AT2G28520,AT3G13310,AT4G01900,AT4G04910,AT4G22330,AT5G13330,AT5G13490,AT5G52640,AT1G04520,AT1G05070,AT1G05560,AT1G05680,AT1G07590,AT1G09390,AT1G09750,AT1G12500,AT1G12845,AT1G13280,AT1G13560,AT1G14710,AT1G17720,AT1G18840,AT1G19430,AT1G20190,AT1G20840,AT1G21070,AT1G23850,AT1G27100,AT1G32190,AT1G43160,AT1G51570,AT1G51940,AT1G55120,AT1G55130,AT1G55360,AT1G58080,AT1G61890,AT1G63090,AT1G64390,AT1G65060,AT1G66760,AT1G68650,AT1G69040,AT1G69530,AT1G70280,AT1G70370,AT1G74960,AT1G76470,AT1G77610,AT1G78560,AT1G79160,AT2G06050,AT2G23170,AT2G24100,AT2G26190,AT2G27810,AT2G29440,AT2G29460,AT2G29480,AT2G30600,AT2G32410,AT2G33170,AT2G34020,AT2G36670,AT2G37760,AT2G38240,AT2G40280,AT2G40840,AT2G40940,AT2G43360,AT2G44080,AT2G46420,AT2G46510,AT2G46930,AT2G47930,AT2G48020,AT3G05150,AT3G05220,AT3G06450,AT3G06650,AT3G09350,AT3G10520,AT3G11210,AT3G12560,AT3G13560,AT3G14200,AT3G15350,AT3G15480,AT3G15500,AT3G16770,AT3G17120,AT3G17860,AT3G19970,AT3G20110,AT3G20260,AT3G20660,AT3G21670,AT3G23400,AT3G23640,AT3G44880,AT3G48520,AT3G49310,AT3G50070,AT3G55720,AT3G56200,AT3G57050,AT3G57520,AT3G61820,AT4G00710,AT4G01410,AT4G08170,AT4G10790,AT4G12470,AT4G16260,AT4G16710,AT4G18160,AT4G19120,AT4G21990,AT4G26690,AT4G26700,AT4G27654,AT4G27720,AT4G28100,AT4G30420,AT4G31800,AT4G33920,AT4G34710,AT4G34860,AT4G36010,AT4G36040,AT4G36360,AT4G39800,AT4G39840,AT5G02200,AT5G04870,AT5G05890,AT5G05900,AT5G07190,AT5G07990,AT5G08500,AT5G08580,AT5G11420,AT5G11650,AT5G11800,AT5G13080,AT5G13220,AT5G13750,AT5G16010,AT5G17010,AT5G18400,AT5G18470,AT5G19070,AT5G19520,AT5G22300,AT5G24620,AT5G26340,AT5G38470,AT5G39610,AT5G40870,AT5G41600,AT5G42100,AT5G48110,AT5G48450,AT5G49100,AT5G53090,AT5G53760,AT5G54170,AT5G54390,AT5G55180,AT5G60980,AT5G62210,AT5G62520,AT5G62570,AT5G63450,AT5G63650,AT5G64120,AT5G64330,AT5G65270,AT5G65380,AT5G66310,AT5G67360 DINNENY_END-RADIAL_FE-DEPRIVATION_UP Significant up-regulation in END of radial in response to iron-deprivation (Table S2 PubmedID:18436742) AT5G05250,AT4G16370,AT3G56980,AT1G56430,AT1G33750,AT2G07721,AT3G02480,AT3G15353,AT5G62340,AT5G66815 DINNENY_END-RADIAL_FE-DEPRIVATION_DN Significant down-regulation in END of radial in response to iron-deprivation (Table S2 PubmedID:18436742) AT2G44120,AT1G04660,AT2G16720,AT2G22620,AT4G17220,AT1G36370,AT2G04520,AT5G16440,AT1G06550,AT1G15430,AT1G32700,AT1G50460,AT2G16900,AT2G30040,AT1G36160,AT1G37130,AT2G01520,AT2G32510,AT4G04610,AT5G12010,AT5G41790,AT5G60790,AT1G07610,AT1G20380,AT1G74450,AT2G01530,AT2G33580,AT3G46620,AT4G25100,AT4G33300,AT5G56870,AT1G01480,AT1G06640,AT1G07000,AT1G07530,AT1G08670,AT1G08930,AT1G11360,AT1G11600,AT1G11930,AT1G15040,AT1G15340,AT1G17145,AT1G17550,AT1G17745,AT1G18260,AT1G18740,AT1G20620,AT1G22280,AT1G22440,AT1G22930,AT1G23390,AT1G23710,AT1G23870,AT1G24100,AT1G27950,AT1G29970,AT1G30520,AT1G30700,AT1G31130,AT1G32360,AT1G34750,AT1G35350,AT1G48420,AT1G49580,AT1G50250,AT1G50600,AT1G51500,AT1G54540,AT1G54730,AT1G56580,AT1G56660,AT1G60140,AT1G61240,AT1G62040,AT1G63180,AT1G64280,AT1G64720,AT1G65690,AT1G66160,AT1G67060,AT1G67310,AT1G70140,AT1G70530,AT1G70850,AT1G71710,AT1G72360,AT1G72820,AT1G73260,AT1G73330,AT1G74740,AT1G75220,AT1G75900,AT1G76210,AT1G76790,AT1G77180,AT1G78080,AT1G78660,AT1G78960,AT1G80380,AT1G80830,AT2G01350,AT2G02370,AT2G05710,AT2G07180,AT2G11910,AT2G17870,AT2G17990,AT2G18700,AT2G20010,AT2G20290,AT2G20580,AT2G21950,AT2G22660,AT2G24240,AT2G24550,AT2G26670,AT2G26770,AT2G27510,AT2G28650,AT2G28840,AT2G28910,AT2G30500,AT2G30740,AT2G31810,AT2G32170,AT2G32260,AT2G33340,AT2G33480,AT2G34310,AT2G34470,AT2G37970,AT2G38370,AT2G38400,AT2G38530,AT2G38540,AT2G38800,AT2G39360,AT2G40140,AT2G42010,AT2G42840,AT2G43535,AT2G44500,AT2G45810,AT2G46340,AT2G47070,AT2G47400,AT3G06760,AT3G07030,AT3G07560,AT3G08970,AT3G09260,AT3G12140,AT3G13460,AT3G14990,AT3G15730,AT3G16450,AT3G16470,AT3G16940,AT3G19100,AT3G20250,AT3G20520,AT3G21090,AT3G23000,AT3G23080,AT3G25190,AT3G25250,AT3G25730,AT3G26890,AT3G27110,AT3G28450,AT3G30390,AT3G44110,AT3G45300,AT3G48360,AT3G48530,AT3G49490,AT3G50190,AT3G50360,AT3G51370,AT3G51910,AT3G52400,AT3G52430,AT3G53670,AT3G53780,AT3G54290,AT3G55980,AT3G57530,AT3G57880,AT3G61440,AT3G62260,AT3G63500,AT4G00400,AT4G01610,AT4G04840,AT4G11380,AT4G13530,AT4G15330,AT4G16240,AT4G17483,AT4G17800,AT4G19160,AT4G19865,AT4G20830,AT4G20860,AT4G21340,AT4G21620,AT4G21810,AT4G22780,AT4G23670,AT4G24620,AT4G25390,AT4G27970,AT4G29020,AT4G29080,AT4G33420,AT4G33910,AT4G34138,AT4G34230,AT4G34350,AT4G36430,AT4G37410,AT4G37610,AT4G37870,AT4G38130,AT4G38490,AT4G39330,AT4G39350,AT5G01600,AT5G01870,AT5G02310,AT5G03380,AT5G08240,AT5G08530,AT5G09220,AT5G09880,AT5G10160,AT5G10740,AT5G10860,AT5G10960,AT5G11230,AT5G15730,AT5G15870,AT5G19290,AT5G19330,AT5G19900,AT5G20960,AT5G22630,AT5G22740,AT5G23450,AT5G24890,AT5G25610,AT5G26030,AT5G26280,AT5G35380,AT5G37830,AT5G40200,AT5G40270,AT5G41040,AT5G42820,AT5G44700,AT5G45410,AT5G45670,AT5G46760,AT5G47070,AT5G47220,AT5G47530,AT5G48480,AT5G50380,AT5G50440,AT5G53460,AT5G54080,AT5G54540,AT5G57480,AT5G57800,AT5G58430,AT5G59320,AT5G59550,AT5G63590,AT5G63620,AT5G64570,AT5G64840,AT5G64920,AT5G65630,AT5G65670,AT5G67340 DINNENY_STE-RADIAL_FE-DEPRIVATION_UP Significant up-regulation in STE of radial in response to iron-deprivation (Table S2 PubmedID:18436742) AT1G76180,AT5G05250,AT3G12580,AT4G16370,AT3G56980,AT2G16720,AT1G56430,AT1G02360,AT1G25560,AT3G49840,AT4G24960,AT5G25760,AT5G48570,AT1G06550,AT1G15430,AT1G32700,AT1G50460,AT2G16900,AT2G30040,AT1G01470,AT1G20440,AT1G60960,AT2G01850,AT4G33150,AT4G38620,AT5G59820,AT1G02900,AT1G10480,AT1G12110,AT1G24440,AT1G32100,AT1G72230,AT1G72430,AT1G76560,AT2G17710,AT2G36410,AT2G39530,AT2G40750,AT2G43590,AT3G02240,AT3G12500,AT3G13650,AT4G14010,AT4G14380,AT5G42830,AT5G57785,AT1G01230,AT1G01630,AT1G02270,AT1G02310,AT1G02400,AT1G02816,AT1G04550,AT1G05340,AT1G06400,AT1G06780,AT1G06840,AT1G07380,AT1G07420,AT1G09560,AT1G09920,AT1G10150,AT1G10370,AT1G10740,AT1G11310,AT1G14200,AT1G14400,AT1G14540,AT1G14550,AT1G15350,AT1G15370,AT1G15400,AT1G15670,AT1G16240,AT1G17080,AT1G17180,AT1G17730,AT1G18460,AT1G18980,AT1G19180,AT1G19440,AT1G20490,AT1G22640,AT1G22740,AT1G22885,AT1G22985,AT1G23020,AT1G23760,AT1G23800,AT1G24170,AT1G26690,AT1G26920,AT1G27380,AT1G29050,AT1G29390,AT1G30620,AT1G36980,AT1G44770,AT1G47400,AT1G48320,AT1G48600,AT1G48850,AT1G49740,AT1G50670,AT1G50740,AT1G51200,AT1G51690,AT1G51950,AT1G52200,AT1G52910,AT1G53400,AT1G53500,AT1G53730,AT1G55450,AT1G55920,AT1G59590,AT1G60710,AT1G60940,AT1G61140,AT1G61340,AT1G61660,AT1G62990,AT1G63520,AT1G63840,AT1G64440,AT1G65720,AT1G65820,AT1G65840,AT1G66230,AT1G66240,AT1G67080,AT1G69410,AT1G69680,AT1G70660,AT1G72500,AT1G73640,AT1G74310,AT1G74590,AT1G74660,AT1G74840,AT1G74940,AT1G74950,AT1G75860,AT1G76550,AT1G76600,AT1G77020,AT1G78000,AT1G78300,AT1G78340,AT1G78380,AT1G78680,AT1G79180,AT1G80840,AT2G01150,AT2G01490,AT2G01910,AT2G02760,AT2G02800,AT2G02960,AT2G04240,AT2G04800,AT2G15570,AT2G15760,AT2G17120,AT2G17380,AT2G17450,AT2G18210,AT2G20625,AT2G21620,AT2G22170,AT2G22500,AT2G22680,AT2G23120,AT2G23560,AT2G24040,AT2G26230,AT2G26390,AT2G27030,AT2G28200,AT2G28400,AT2G28760,AT2G29700,AT2G30400,AT2G30490,AT2G31090,AT2G31110,AT2G32120,AT2G33310,AT2G34500,AT2G34585,AT2G35110,AT2G36310,AT2G36320,AT2G36950,AT2G37110,AT2G37870,AT2G39900,AT2G41010,AT2G41420,AT2G41430,AT2G42210,AT2G42430,AT2G43020,AT2G43290,AT2G43820,AT2G44300,AT2G44310,AT2G44370,AT2G44610,AT2G44690,AT2G45290,AT2G46225,AT2G46370,AT2G46500,AT2G47000,AT2G47730,AT2G48030,AT3G01420,AT3G01520,AT3G02140,AT3G02470,AT3G02800,AT3G02880,AT3G03070,AT3G03100,AT3G04560,AT3G04790,AT3G06350,AT3G06500,AT3G09020,AT3G09740,AT3G10340,AT3G10410,AT3G10500,AT3G10640,AT3G11150,AT3G11530,AT3G11780,AT3G11800,AT3G11880,AT3G12800,AT3G13720,AT3G14840,AT3G15710,AT3G17410,AT3G18280,AT3G18820,AT3G19260,AT3G20510,AT3G21230,AT3G22370,AT3G22540,AT3G22830,AT3G23030,AT3G23730,AT3G23805,AT3G24550,AT3G25610,AT3G25780,AT3G27890,AT3G27960,AT3G28340,AT3G28940,AT3G43800,AT3G44190,AT3G46010,AT3G46440,AT3G47210,AT3G47833,AT3G48140,AT3G48890,AT3G49750,AT3G49780,AT3G50060,AT3G50530,AT3G50660,AT3G50810,AT3G52360,AT3G52880,AT3G53230,AT3G54030,AT3G54120,AT3G54840,AT3G54950,AT3G55960,AT3G59050,AT3G59920,AT3G60130,AT3G61260,AT3G61890,AT3G62420,AT3G62860,AT3G63080,AT3G63310,AT4G00330,AT4G00900,AT4G01150,AT4G01575,AT4G02080,AT4G02380,AT4G02860,AT4G03510,AT4G03520,AT4G04460,AT4G05020,AT4G05160,AT4G11280,AT4G11360,AT4G11600,AT4G17030,AT4G17170,AT4G17510,AT4G17530,AT4G18930,AT4G19640,AT4G19860,AT4G20150,AT4G21410,AT4G21600,AT4G21980,AT4G22150,AT4G22160,AT4G22310,AT4G22460,AT4G22820,AT4G23270,AT4G23680,AT4G23700,AT4G23710,AT4G24160,AT4G24380,AT4G25480,AT4G25490,AT4G26710,AT4G27350,AT4G27652,AT4G27657,AT4G28290,AT4G28400,AT4G28890,AT4G29260,AT4G30210,AT4G31340,AT4G31780,AT4G33550,AT4G33640,AT4G33985,AT4G34120,AT4G34630,AT4G36500,AT4G36750,AT4G37370,AT4G38400,AT4G38540,AT4G39675,AT4G39990,AT5G01550,AT5G01750,AT5G03030,AT5G03960,AT5G04750,AT5G04830,AT5G05410,AT5G07110,AT5G07220,AT5G07460,AT5G07860,AT5G09760,AT5G10450,AT5G10830,AT5G11070,AT5G11280,AT5G11740,AT5G11970,AT5G12340,AT5G14340,AT5G14510,AT5G14730,AT5G16570,AT5G16600,AT5G16830,AT5G17850,AT5G17990,AT5G18680,AT5G18900,AT5G20090,AT5G20500,AT5G20900,AT5G23220,AT5G23750,AT5G24760,AT5G25540,AT5G25940,AT5G26740,AT5G27760,AT5G28050,AT5G37260,AT5G37740,AT5G39510,AT5G39580,AT5G39730,AT5G40690,AT5G40760,AT5G42050,AT5G42300,AT5G42570,AT5G43330,AT5G43520,AT5G44670,AT5G45550,AT5G46590,AT5G46710,AT5G46910,AT5G47180,AT5G47200,AT5G47730,AT5G47880,AT5G48740,AT5G49450,AT5G49480,AT5G49900,AT5G49940,AT5G50420,AT5G52240,AT5G52540,AT5G53450,AT5G54490,AT5G54500,AT5G54760,AT5G54940,AT5G54980,AT5G55850,AT5G56630,AT5G56750,AT5G57330,AT5G57740,AT5G58375,AT5G59150,AT5G59300,AT5G59490,AT5G59890,AT5G60680,AT5G60860,AT5G61240,AT5G61530,AT5G61820,AT5G62020,AT5G62070,AT5G62630,AT5G63600,AT5G63905,AT5G64880,AT5G65020,AT5G66070,AT5G66120 DINNENY_STE-RADIAL_FE-DEPRIVATION_DN Significant down-regulation in STE of radial in response to iron-deprivation (Table S2 PubmedID:18436742) AT1G80410,AT3G07050,AT1G20900,AT2G02160,AT2G22840,AT2G44640,AT3G06130,AT3G20240,AT3G21540,AT3G54320,AT3G59460,AT5G05450,AT5G19090,AT5G57920 BABU_PPV-INFECTED-LEAF_17D-INOCULATION_UP Induced in PPV-infected Arabidopsis leaf tissues 17 days post inoculation (Table S1 PubmedID:18613973) AT1G69295,AT1G20630,AT4G35090,AT1G26850,AT2G40280,AT4G00750,AT4G10440,AT1G31850,AT1G29470,AT4G00740,AT5G64030,AT5G66400,AT2G21490,AT5G23400,AT1G58390,AT1G58410,AT1G61180,AT5G04720,AT5G05400,AT5G35450,AT5G63020,AT4G09360,AT1G61100,AT1G17600,AT4G19530,AT5G17970,AT5G18370,AT5G36930,AT5G45200,AT5G46450,AT3G46530,AT5G45080,AT1G07730,AT2G39430,AT1G64390,AT1G75910,AT3G50400,AT5G39190,AT5G44000,AT1G49860,AT1G78360,AT1G77130,AT1G57570,AT3G16460,AT3G16390,AT3G16430,AT1G52100,AT2G39330,AT4G13550,AT1G06800,AT1G73920,AT1G62510,AT2G10940,AT2G13820,AT2G48130,AT2G48140,AT3G22120,AT3G22620,AT4G12510,AT5G46900,AT5G59310,AT2G24040,AT2G14580,AT1G75800,AT4G24180,AT4G38670,AT1G03495,AT1G12270,AT2G28190,AT1G12520,AT3G20050,AT4G09150,AT4G38660,AT1G18250,AT1G61410,AT4G15820,AT3G23990,AT3G03960,AT3G13470,AT3G13860,AT5G18820,AT5G63530,AT2G20560,AT3G17830,AT3G08910,AT3G44110,AT1G74250,AT2G25560,AT2G26890,AT2G35720,AT2G47440,AT3G04980,AT3G13310,AT4G10130,AT5G18750,AT3G11450,AT5G02500,AT3G09440,AT4G17750,AT5G16820,AT5G15450,AT5G09590,AT5G49910,AT4G37910,AT4G16660,AT4G24280,AT1G79920,AT3G12580,AT5G52640,AT5G56030,AT5G56000,AT1G11660,AT2G04030,AT3G07770,AT2G03020,AT5G28540,AT3G44600,AT1G03760,AT5G55220,AT1G09010,AT1G27520,AT2G40840,AT5G26570,AT1G02850,AT3G06510,AT3G18080,AT5G36890,AT1G52400,AT5G42100,AT5G58090,AT1G78060,AT3G47000,AT3G62710,AT5G64570,AT5G07830,AT1G18310,AT2G32990,AT4G09740,AT2G43660,AT5G61130,AT3G43270,AT5G09760,AT5G53370,AT1G73370,AT4G02280,AT3G15940,AT3G07330,AT1G23870,AT1G60140,AT2G18700,AT4G17770,AT2G31960,AT2G36850,AT5G13000,AT4G38270,AT4G19900,AT1G28680,AT2G19070,AT3G26040,AT3G29590,AT5G48930,AT1G05530,AT2G16890,AT2G31790,AT3G16520,AT3G21750,AT3G46650,AT3G46670,AT5G05870,AT5G26310,AT2G46330,AT2G14890,AT1G14710,AT1G53645,AT1G56530,AT1G77970,AT1G79730,AT2G33490,AT2G39050,AT2G47930,AT3G14010,AT3G22440,AT3G26910,AT4G28160,AT5G09530,AT5G65660,AT1G67510,AT2G34680,AT3G17640,AT5G45510,AT1G67720,AT2G37050,AT3G13380,AT5G07180,AT2G01820,AT2G26330,AT1G66150,AT4G28560,AT1G49490,AT3G22800,AT5G52480,AT5G62640,AT3G50580,AT4G38770,AT1G21640,AT4G36780,AT5G10900,AT5G66210,AT2G41860,AT3G57530,AT1G07670,AT4G26100,AT3G19820,AT5G07450,AT5G61650,AT1G47220,AT2G26760,AT2G17620,AT5G11300,AT1G14750,AT5G10270,AT3G19650,AT4G16130,AT1G31910,AT1G01220,AT3G22790,AT2G30500,AT4G38430,AT5G60300,AT2G29250,AT4G02420,AT4G08480,AT5G19010,AT4G10260,AT3G47220,AT2G42010,AT2G06210,AT3G13460,AT4G15900,AT3G61410,AT3G52890,AT1G04700,AT1G26150,AT1G68830,AT1G70530,AT1G80870,AT2G17700,AT2G18470,AT2G20300,AT2G32850,AT2G35050,AT3G13670,AT4G02010,AT4G23300,AT5G01020,AT5G01920,AT5G11850,AT5G18910,AT5G57610,AT5G60080,AT5G58140,AT1G02970,AT1G09020,AT1G76360,AT2G20040,AT3G04810,AT3G12690,AT3G17850,AT4G19110,AT4G23050,AT4G26610,AT5G47750,AT5G63610,AT5G53000,AT2G46920,AT3G17090,AT1G07430,AT1G18030,AT3G05640,AT5G51760,AT1G62090,AT4G15530,AT3G59420,AT1G54130,AT4G30310,AT2G48010,AT2G30740,AT2G43230,AT3G17410,AT5G25280,AT1G09840,AT4G00720,AT1G11350,AT1G11410,AT1G61440,AT3G10420,AT1G22860,AT3G16857,AT2G37620,AT3G18780,AT1G49240,AT2G38440,AT4G25590,AT1G12430,AT1G20930,AT3G09840,AT3G53230,AT5G03340,AT1G50250,AT2G32900,AT4G32190,AT1G77180,AT2G25170,AT5G49160,AT4G02070,AT1G67500,AT1G67320,AT2G24420,AT3G19210,AT1G79050,AT5G41370,AT5G50340,AT2G31970,AT5G55300,AT5G55310,AT5G63920,AT3G12610,AT3G06400,AT5G18620,AT3G18090,AT4G35800,AT1G68990,AT1G60850,AT3G19720,AT1G10290,AT1G14830,AT1G59610,AT2G35110,AT2G36490,AT3G12980,AT5G61070,AT5G26040,AT1G08460,AT1G48620,AT3G18035,AT4G13570,AT1G07980,AT5G19310,AT4G38950,AT1G63640,AT2G21380,AT3G45850,AT3G50240,AT5G06670,AT5G10470,AT5G65930,AT5G47820,AT4G27180,AT1G67370,AT4G08580,AT5G55230,AT1G14840,AT2G01750,AT3G19960,AT1G20400,AT1G36100,AT2G37080,AT2G46250,AT3G53350,AT5G59210,AT1G04600,AT1G17580,AT5G20470,AT1G05320,AT1G50840,AT2G28560,AT5G16270,AT2G26460,AT5G48330,AT5G37350,AT5G28740,AT1G04820,AT5G19770,AT5G62690,AT5G12250,AT1G03880,AT4G16340,AT3G15400,AT2G31260,AT4G12770,AT5G62010,AT3G02260,AT2G01420,AT1G59750,AT2G33860,AT1G30330,AT5G20730,AT4G23980,AT2G14960,AT3G07390,AT2G21200,AT4G12980,AT3G47700,AT1G07750,AT5G42480,AT1G28330,AT2G41380,AT2G25660,AT5G16730,AT3G23150,AT5G03280,AT4G15090,AT3G11540,AT5G14920,AT4G09610,AT4G08310,AT3G56990,AT4G29020,AT4G33610,AT5G11700,AT3G27660,AT5G40420,AT3G60860,AT1G01960,AT2G34560,AT3G53040,AT1G52690,AT1G75520,AT1G79310,AT5G61150,AT2G36910,AT4G25960,AT3G28860,AT1G28010,AT5G66300,AT5G53950,AT5G22290,AT1G34190,AT1G80530,AT5G47470,AT5G40230,AT2G34350,AT5G65770,AT1G13220,AT3G14120,AT5G05680,AT2G32100,AT1G79700,AT2G48120,AT4G38350,AT1G13980,AT1G28290,AT2G05580,AT2G19040,AT3G16570,AT3G13870,AT4G24190,AT1G48900,AT5G03940,AT5G61970,AT5G04360,AT1G10760,AT1G49040,AT4G03330,AT4G20420,AT2G29630,AT2G47840,AT5G24520,AT3G27920,AT3G18890,AT4G02020,AT5G06290,AT1G31180,AT1G80560,AT4G32770,AT1G04330,AT1G22850,AT1G23400,AT1G28530,AT1G49890,AT1G50660,AT1G71970,AT2G20020,AT2G35260,AT2G37980,AT2G45000,AT2G47390,AT3G04550,AT3G04650,AT3G13674,AT3G15357,AT3G18390,AT3G26890,AT3G55070,AT3G56040,AT4G18610,AT4G19390,AT4G19980,AT4G26660,AT4G29750,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AT5G12850,AT1G07360,AT5G06420,AT4G24630,AT1G20110,AT2G45050,AT3G50890,AT5G15850,AT3G02380,AT1G68360,AT3G18290,AT1G65660,AT3G26560,AT5G62190,AT1G20920,AT2G07750,AT2G33730,AT5G61140,AT3G58510,AT1G01040,AT3G06980,AT3G46960,AT3G61240,AT2G06990,AT1G06670,AT1G48650,AT2G35920,AT5G10370,AT1G20720,AT1G32490,AT4G18465,AT5G13010,AT3G54280,AT1G20960,AT1G50200,AT4G26870,AT1G80780,AT1G25350,AT1G29880,AT3G02760,AT1G30010,AT1G74350,AT4G39280,AT1G49760,AT2G23350,AT3G16380,AT5G23690,AT3G03710,AT3G21300,AT5G27470,AT1G11870,AT4G20440,AT2G37340,AT5G64270,AT3G55200,AT5G51300,AT5G55100,AT4G31200,AT1G14650,AT4G33760,AT3G62120,AT5G52520,AT1G09620,AT5G37150,AT2G19120,AT4G36690,AT1G60830,AT5G08600,AT4G02400,AT1G14610,AT1G64550,AT2G07680,AT3G10670,AT3G21250,AT3G47730,AT3G54540,AT3G55320,AT4G27420,AT5G64840,AT1G79600,AT3G24190,AT5G24970,AT5G50330,AT5G64940,AT4G38250,AT5G65990,AT4G13510,AT1G64780,AT2G38290,AT1G12480,AT5G24030,AT5G01490,AT2G30240,AT3G52080,AT1G16380,AT3G27170,AT5G15410,AT1G19780,AT1G30400,AT2G34660,AT2G47800,AT3G62700,AT5G52440,AT4G00630,AT2G20780,AT3G08650,AT5G14040,AT2G47000,AT1G10390,AT2G41620,AT5G20200,AT1G07290,AT3G27020,AT4G10770,AT4G16370,AT5G64280,AT5G64290,AT5G12860,AT4G32390,AT3G26570,AT2G35060,AT1G70300,AT3G07100,AT5G52280,AT1G18880,AT1G32450,AT1G68570,AT3G45680,AT3G46450,AT1G72150,AT1G72160,AT4G39170,AT3G44340,AT5G55470,AT5G47560,AT1G22710,AT1G71890,AT4G16480,AT3G51895,AT3G59030,AT3G62770,AT2G05120,AT1G20840,AT4G35300,AT5G20380,AT1G43310,AT2G32270,AT3G58810,AT2G13160,AT4G04270,AT4G09540,AT5G43800,AT1G36110,AT1G43886,AT2G07080,AT4G10580,AT4G04230,AT1G41795,AT3G42170,AT1G37057,AT2G06660,AT1G45070,AT3G06940,AT3G05850,AT1G43240,AT2G14030,AT2G14595,AT1G43995,AT2G15720,AT5G20880,AT1G01430,AT1G01770,AT1G02330,AT1G03420,AT1G04230,AT1G06590,AT1G08390,AT1G09280,AT1G09310,AT1G09610,AT1G09910,AT1G09980,AT1G10180,AT1G10250,AT1G10530,AT1G10670,AT1G10690,AT1G11120,AT1G12150,AT1G13940,AT1G15780,AT1G15940,AT1G16210,AT1G18620,AT1G19360,AT1G19835,AT1G19960,AT1G20870,AT1G21660,AT1G21680,AT1G21810,AT1G21840,AT1G22750,AT1G23230,AT1G23590,AT1G23790,AT1G24996,AT1G26110,AT1G27590,AT1G28260,AT1G28380,AT1G29350,AT1G30800,AT1G32810,AT1G34220,AT1G34630,AT1G35660,AT1G36980,AT1G42480,AT1G03910,AT1G47550,AT1G47900,AT1G48560,AT1G50120,AT1G50450,AT1G53180,AT1G53200,AT1G55240,AT1G56660,AT1G60790,AT1G61620,AT1G64680,AT1G67680,AT1G68790,AT1G69050,AT1G70160,AT1G71080,AT1G73930,AT1G74160,AT1G75730,AT1G75810,AT1G76850,AT1G77600,AT1G79280,AT1G79830,AT1G80310,AT1G80610,AT2G03070,AT2G04380,AT2G05210,AT2G06030,AT2G07170,AT2G07728,AT2G15440,AT2G16070,AT2G19350,AT2G19390,AT2G21180,AT2G21195,AT2G24150,AT2G28370,AT2G30900,AT2G31120,AT2G31290,AT2G32240,AT2G32910,AT2G36430,AT2G36550,AT2G37380,AT2G37570,AT2G40020,AT2G40550,AT2G40800,AT2G41960,AT2G42310,AT2G42370,AT2G44200,AT2G44260,AT2G46360,AT2G47910,AT3G01310,AT3G01680,AT3G01780,AT3G02250,AT3G02860,AT3G03160,AT3G04630,AT3G05980,AT3G06210,AT3G07210,AT3G07310,AT3G07350,AT3G07660,AT3G10650,AT3G13060,AT3G13330,AT3G14060,AT3G18240,AT3G18380,AT3G18440,AT3G18900,AT3G19870,AT3G20260,AT3G20490,AT3G21430,AT3G22380,AT3G22450,AT3G22520,AT3G25870,AT3G26800,AT3G27270,AT3G27320,AT3G27570,AT3G27670,AT3G28430,AT3G44370,AT3G47250,AT3G47610,AT3G48120,AT3G48200,AT3G48710,AT3G49490,AT3G52480,AT3G53320,AT3G56610,AT3G58840,AT3G60700,AT3G63390,AT4G01290,AT4G02720,AT4G02920,AT4G03090,AT4G05630,AT4G09850,AT4G10930,AT4G11090,AT4G13750,AT4G15030,AT4G17110,AT4G18600,AT4G20020,AT4G21720,AT4G24410,AT4G26170,AT4G26630,AT4G27060,AT4G27500,AT4G28080,AT4G28200,AT4G28310,AT4G28760,AT4G28910,AT4G31080,AT4G31880,AT4G32330,AT4G32350,AT4G32620,AT4G33960,AT4G37120,AT4G39450,AT5G01030,AT5G01360,AT5G02480,AT5G03390,AT5G03670,AT5G04320,AT5G04460,AT5G04670,AT5G05180,AT5G05800,AT5G07940,AT5G08220,AT5G08550,AT5G10010,AT5G10210,AT5G11360,AT5G13540,AT5G13950,AT5G15070,AT5G15680,AT5G16280,AT5G16920,AT5G19120,AT5G20680,AT5G22650,AT5G24610,AT5G24630,AT5G35180,AT5G38690,AT5G38720,AT5G39880,AT5G40450,AT5G40960,AT5G41100,AT5G41140,AT5G41190,AT5G41860,AT5G42050,AT5G42520,AT5G42920,AT5G45460,AT5G45480,AT5G47635,AT5G47680,AT5G48720,AT5G49640,AT5G50360,AT5G50730,AT5G53020,AT5G53440,AT5G53800,AT5G55860,AT5G57770,AT5G58100,AT5G58510,AT5G58960,AT5G63340,AT5G66420,AT5G66540,AT3G04740,AT2G07130,AT1G07680,AT1G33940,AT1G34280,AT1G35640,AT1G36920,AT1G43940,AT1G50530,AT1G54430,AT1G72580,AT1G75360,AT1G79170,AT2G05600,AT2G07505,AT2G07672,AT2G07692,AT2G14390,AT2G15360,AT2G15930,AT2G17960,AT2G25990,AT2G34230,AT3G19085,AT3G19516,AT3G30150,AT3G32960,AT3G42400,AT3G43480,AT3G43950,AT3G45800,AT3G49770,AT3G60470,AT4G03040,AT4G07380,AT4G08710,AT4G20250,AT4G23780,AT4G36560,AT5G02000,AT5G13130,AT5G15060,AT5G23640,AT5G36720,AT5G49250,AT5G49670,AT5G56570,AT5G67040,AT2G46550,AT3G01060,AT3G01370,AT3G01690,AT3G11590,AT3G55760,AT3G56410,AT3G63180,AT4G15840,AT4G38550,AT5G05480,AT5G15540,AT5G22450,AT5G56850,AT5G58630,AT5G60030,AT2G19850,AT5G20640,AT5G48270,AT1G42550,AT1G02200,AT1G08690,AT1G14100,AT1G33690,AT1G40550,AT1G56075,AT1G72400,AT2G07670,AT2G11160,AT2G23280,AT2G30030,AT2G35715,AT2G41030,AT2G43170,AT2G44720,AT3G03390,AT3G17870,AT3G27780,AT3G50600,AT4G07610,AT5G20530,AT5G26707,AT5G29080,AT5G30332,AT5G31411,AT5G55915 BABU_PPV-INFECTED-LEAF_17D-INOCULATION_DN Repressed in PPV-infected Arabidopsis leaf tissues 17 days post inoculation (Table S2 PubmedID:18613973) 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AT1G64310,AT4G32430,AT3G20730,AT4G26800,AT3G05340,AT1G77010,AT4G22970,AT1G67690,AT1G52700,AT3G16360,AT5G52390,AT5G64040,AT3G22104,AT4G27110,AT5G02200,AT2G22860,AT5G65870,AT3G44735,AT1G13590,AT1G10640,AT2G12230,AT5G28230,AT1G57990,AT4G01480,AT1G56700,AT5G22400,AT5G44170,AT2G15280,AT2G01240,AT1G64090,AT4G29090,AT2G18600,AT4G36800,AT3G12203,AT2G47150,AT5G50600,AT2G29340,AT1G29960,AT1G52600,AT2G03120,AT1G30470,AT2G14920,AT1G04750,AT2G33120,AT1G37063,AT5G60500,AT5G36120,AT3G08990,AT5G53940,AT3G49160,AT3G09800,AT2G17380,AT1G47830,AT1G02090,AT1G69750,AT3G10780,AT3G07680,AT3G22845,AT3G25040,AT2G33470,AT2G36900,AT5G54980,AT1G09380,AT3G05280,AT4G31930,AT2G42210,AT2G29530,AT1G61570,AT5G41685,AT2G44620,AT5G18800,AT3G06310,AT2G02050,AT5G47890,AT3G62790,AT3G03070,AT5G67590,AT1G60740,AT1G47750,AT4G04470,AT5G48540,AT1G42560,AT1G43800,AT5G42890,AT4G22753,AT5G40650,AT5G40670,AT4G32470,AT2G01090,AT5G53530,AT2G34940,AT3G01390,AT4G23710,AT1G16820,AT3G01990,AT1G31812,AT3G22950,AT5G52210,AT1G12630,AT1G21910,AT1G63030,AT1G33760,AT1G50680,AT2G40600,AT4G12790,AT3G49900,AT4G37610,AT3G55470,AT1G76650,AT4G27280,AT5G39670,AT3G18430,AT2G44310,AT1G64850,AT1G54450,AT5G54490,AT4G12860,AT2G46600,AT1G73630,AT1G21550,AT4G34120,AT1G70895,AT4G12060,AT3G24450,AT2G24940,AT1G60660,AT5G37210,AT5G54030,AT1G69150,AT3G06990,AT3G45530,AT2G44370,AT3G07000,AT2G23100,AT1G44050,AT1G29180,AT2G44380,AT5G59930,AT1G13260,AT3G61970,AT5G51590,AT4G35900,AT5G65590,AT4G21050,AT1G64750,AT5G45010,AT1G28370,AT5G47230,AT2G34050,AT1G11770,AT2G46740,AT4G15200,AT5G08350,AT1G56330,AT5G03905,AT1G10500,AT3G04720,AT5G63750,AT2G34210,AT3G03420,AT2G39830,AT1G17920,AT4G22700,AT1G68510,AT1G02140,AT5G23840,AT3G58200,AT5G26280,AT5G52330,AT4G21850,AT4G21830,AT4G04840,AT5G43070,AT5G27940,AT5G56750,AT5G45700,AT3G59180,AT2G44510,AT4G04900,AT2G20430,AT5G25540,AT1G31170,AT5G15350,AT5G57920,AT5G20230,AT2G24240,AT1G78160,AT5G56510,AT4G39890,AT5G47960,AT4G18800,AT2G21880,AT4G17530,AT2G31680,AT1G52280,AT5G03455,AT3G25480,AT3G42830,AT5G20570,AT3G46020,AT5G15750,AT1G24090,AT1G05720,AT2G05900,AT5G49480,AT2G37970,AT3G48600,AT1G55300,AT1G72930,AT2G07440,AT1G66160,AT3G18710,AT3G23605,AT2G22880,AT1G21320,AT3G58000,AT1G68450,AT1G78410,AT5G65170,AT5G46780,AT1G49910,AT5G46710,AT5G52760,AT5G52750,AT1G57780,AT5G48290,AT5G52740,AT4G05030,AT5G14910,AT1G71050,AT3G15353,AT1G07600,AT1G07610,AT1G34030,AT4G09800,AT5G28060,AT2G19750,AT4G29390,AT5G56670,AT5G67510,AT2G32220,AT3G22230,AT2G19730,AT3G06700,AT3G06680,AT4G26230,AT3G09500,AT2G39390,AT5G02610,AT3G53740,AT5G02450,AT3G23390,AT4G14320,AT1G52300,AT2G04520,AT5G35680,AT2G27700,AT1G69410,AT5G54940,AT5G54760,AT1G68590,AT5G46160,AT1G07830,AT5G18790,AT2G18400,AT4G12600,AT4G22380,AT1G03330,AT2G47640,AT2G23930,AT3G11500,AT5G48870,AT5G58680,AT4G12920,AT4G01610,AT4G16500,AT5G12140,AT2G40880,AT2G34080,AT5G40560,AT2G16290,AT3G49150,AT5G51380,AT4G02740,AT2G29610,AT2G36090,AT4G13985,AT2G14290,AT3G22350,AT1G61340,AT3G10990,AT1G70590,AT2G27310,AT1G51320,AT3G47140,AT1G64290,AT3G02840,AT5G28160,AT4G23580,AT3G27150,AT4G19260,AT4G08670,AT5G55450,AT4G12480,AT4G14815,AT5G05960,AT5G48490,AT1G36150,AT5G62080,AT5G48485,AT3G52130,AT5G43580,AT2G38870,AT5G59140,AT2G02280,AT5G11940,AT5G58840,AT1G17860,AT1G73260,AT1G32840,AT1G37020,AT4G07680,AT3G21840,AT3G21830,AT5G55160,AT1G65130,AT3G52590,AT2G36170,AT4G02970,AT4G24990,AT2G35360,AT3G26980,AT1G22050,AT5G42300,AT2G16740,AT1G45050,AT1G75440,AT5G41340,AT2G46030,AT1G70660,AT4G27960,AT1G66510,AT2G22750,AT1G73830,AT1G18400,AT1G71200,AT5G46690,AT1G22490,AT3G06120,AT4G14410,AT4G36930,AT5G15160,AT5G39860,AT5G49450,AT2G13150,AT5G38800,AT2G18160,AT2G04690,AT2G42060,AT4G01340,AT3G58680,AT5G58890,AT5G10140,AT3G61120,AT4G11880,AT2G26320,AT5G62165,AT2G45650,AT2G14210,AT1G80500,AT3G24310,AT2G21650,AT5G23650,AT4G09460,AT3G62610,AT2G25230,AT2G32460,AT2G31180,AT3G23250,AT1G66230,AT3G53200,AT3G27810,AT5G17800,AT3G08500,AT5G53200,AT5G58610,AT5G11010,AT5G19490,AT2G27330,AT1G13330,AT1G09920,AT5G42290,AT3G25940,AT5G03220,AT4G33280,AT5G18090,AT5G18000,AT1G26680,AT4G11175,AT4G31805,AT4G23810,AT2G30590,AT3G01080,AT2G18350,AT2G15550,AT4G21610,AT3G27710,AT2G25370,AT4G12040,AT3G12630,AT3G28210,AT2G24790,AT3G21890,AT5G54470,AT3G46070,AT4G35280,AT5G40710,AT5G10970,AT1G03840,AT5G59820,AT3G57480,AT1G66500,AT3G43750,AT1G26800,AT2G34990,AT3G13228,AT2G42350,AT3G15740,AT5G60820,AT1G14260,AT3G46620,AT1G74990,AT4G02075,AT1G68070,AT5G22920,AT1G53820,AT2G42360,AT4G14365,AT3G06740,AT3G02820,AT1G31360,AT5G18810,AT1G65810,AT3G52310,AT1G66950,AT5G60740,AT2G37910,AT5G22900,AT1G08090,AT5G09690,AT5G65000,AT3G55740,AT4G24920,AT3G48570,AT1G69860,AT3G45720,AT3G45710,AT5G11570,AT5G63060,AT5G26250,AT5G54750,AT1G11890,AT2G10630,AT2G04210,AT5G35140,AT2G10640,AT4G04590,AT1G35590,AT2G14980,AT1G44070,AT4G10990,AT2G07693,AT1G34545,AT4G04280,AT4G02960,AT2G11220,AT1G33817,AT1G34090,AT3G29792,AT4G10460,AT2G13940,AT2G21460,AT5G35310,AT2G10780,AT2G12870,AT2G06170,AT2G13230,AT4G07590,AT2G05610,AT2G13020,AT4G07780,AT3G42260,AT1G36130,AT2G14040,AT3G43050,AT3G59860,AT1G47816,AT4G09410,AT2G06410,AT4G08220,AT4G02490,AT5G33200,AT2G24490,AT5G37090,AT4G07340,AT2G02180,AT5G15120,AT5G22530,AT3G15420,AT5G04080,AT1G19530,AT2G47720,AT1G74055,AT3G02240,AT5G63135,AT1G48730,AT2G18210,AT3G18510,AT4G39235,AT1G23570,AT3G60940,AT5G47830,AT2G05270,AT1G05575,AT3G12540,AT1G76960,AT3G50150,AT3G26050,AT2G06040,AT5G65610,AT4G39675,AT5G01380,AT4G36500,AT1G23600,AT2G19290,AT5G11070,AT1G15270,AT5G24313,AT5G50335,AT5G62520,AT3G18300,AT1G22030,AT1G07860,AT2G23440,AT2G19320,AT5G22875,AT4G35905,AT4G35070,AT2G07713,AT3G46430,AT1G68875,AT1G15010,AT3G14395,AT3G12870,AT1G27330,AT5G16660,AT5G66815,AT5G51800,AT2G04790,AT2G24920,AT5G41050,AT2G20480,AT4G36370,AT3G11000,AT1G30135,AT2G31150,AT2G44240,AT1G68380,AT1G19020,AT2G17940,AT1G22140,AT5G04000,AT1G36640,AT3G22210,AT5G57500,AT5G22280,AT3G05320,AT1G78710,AT1G34010,AT3G21520,AT4G05590,AT2G09960,AT3G26960,AT4G23350,AT4G04630,AT2G14560,AT4G14615,AT2G31710,AT5G40460,AT4G25760,AT1G29250,AT1G67865,AT2G23120,AT5G65580,AT1G24575,AT1G19380,AT3G13845,AT4G39670,AT3G25400,AT4G37290,AT3G47510,AT1G07060,AT3G15770,AT4G27380,AT5G44820,AT3G50550,AT5G10695,AT1G61160,AT1G20890,AT1G06010,AT5G37730,AT3G45160,AT1G77710,AT1G49000,AT3G14280,AT1G76600,AT1G48330,AT1G67920,AT3G01170,AT5G22270,AT1G03710,AT1G73120,AT1G58420,AT5G63905,AT5G54850,AT1G14870,AT2G34600,AT1G15860,AT1G68585,AT1G76405,AT5G11970,AT1G71430,AT1G52200,AT2G24550,AT2G05620,AT1G32030,AT1G65500,AT1G22090,AT1G72170,AT5G57060,AT4G37445,AT5G59410,AT4G10300,AT3G12650,AT3G28980,AT5G60630,AT4G30010,AT1G64360,AT1G23710,AT4G09890,AT5G22540,AT4G33985,AT1G01725,AT5G13190,AT2G02510,AT2G25310,AT1G75160,AT2G42870,AT2G23090,AT1G10660,AT2G20500,AT1G32460,AT1G25275,AT2G44000,AT2G27290,AT2G28230,AT3G57360,AT5G46230,AT4G12760,AT4G13150,AT2G45860,AT1G48500,AT5G43680,AT3G04780,AT3G13910,AT1G48440,AT2G44360,AT3G51750,AT3G47295,AT2G15960,AT4G28830,AT5G05300,AT3G06070,AT5G41320,AT3G22530,AT3G16220,AT5G09960,AT5G51620,AT1G23960,AT1G64980,AT5G53880,AT5G16060,AT3G17300,AT5G18150,AT3G10120,AT1G50740,AT1G33710,AT5G18310,AT2G24020,AT1G62250,AT1G12030,AT1G22520,AT5G02160,AT2G04039,AT1G30550,AT1G65295,AT5G24165,AT5G15460,AT2G46390,AT4G24380,AT4G00910,AT4G16320,AT5G43970,AT1G61260,AT5G58570,AT4G24370,AT5G55620,AT2G44850,AT1G54840,AT4G10140,AT1G50730,AT4G28085,AT2G30690,AT2G30000,AT3G44450,AT1G67620,AT4G23885,AT2G14830,AT1G09330,AT1G18730,AT1G25400,AT3G27770,AT1G75180,AT5G40980,AT4G31560,AT5G40510,AT4G18425,AT5G24660,AT3G21865,AT4G33925,AT5G14105,AT5G38700,AT3G19660,AT5G38300,AT3G62460,AT1G33810,AT2G06255,AT2G01930,AT2G37940,AT5G66290,AT1G72060,AT3G15480,AT3G08610,AT1G71940,AT3G28970,AT4G18400,AT1G05550,AT5G64510,AT5G06610,AT5G19240,AT1G60870,AT1G62060,AT5G66490,AT5G25170,AT3G57160,AT5G40690,AT2G07739,AT1G35210,AT1G05205,AT2G41780,AT2G04800,AT5G65300,AT5G14730,AT5G54150,AT2G35736,AT5G41960,AT4G10280,AT5G53160,AT2G32190,AT1G76070,AT3G14560,AT5G08320,AT3G15900,AT4G35980,AT4G11450,AT5G41560,AT2G22870,AT2G20930,AT5G28150,AT1G74440,AT2G37975,AT2G44525,AT3G44280,AT2G48110,AT2G32380,AT2G39650,AT3G45750,AT4G29735,AT4G23496,AT4G27530,AT1G74770,AT1G17080,AT2G46230,AT4G00310,AT1G73650,AT3G15351,AT3G45050,AT3G27350,AT4G04330,AT4G29660,AT5G38660,AT1G68660,AT1G06510,AT3G22231,AT1G53800,AT3G21700,AT2G28605,AT2G46540,AT1G60010,AT1G21010,AT3G27100,AT1G49500,AT5G64900,AT5G10710,AT1G02475,AT1G67860,AT1G17490,AT1G64490,AT4G21105,AT5G08440,AT3G42150,AT3G56290,AT5G52110,AT4G19140,AT5G56020,AT2G28430,AT5G64816,AT5G47050,AT5G42070,AT5G62960,AT5G35490,AT1G33820,AT2G14020,AT3G17190,AT3G32280,AT5G49590,AT5G57510,AT1G76220,AT3G29265,AT3G32190,AT3G24270,AT3G25080,AT1G32680,AT5G26100,AT3G28190,AT1G10710,AT4G22800,AT1G24938,AT3G29600,AT2G34120,AT3G20180,AT1G15600,AT1G32040,AT2G34800,AT2G10380,AT5G38770,AT2G10370,AT1G42710,AT4G09400,AT1G43590,AT5G47900,AT1G29480,AT3G32120,AT1G29620,AT1G06320,AT4G05640,AT1G19030,AT2G06230,AT5G44990,AT2G04330,AT1G05040,AT2G40780,AT3G27370,AT1G59930,AT1G05920,AT2G20625,AT2G18070,AT5G49150,AT5G28570,AT3G42700,AT2G05000,AT1G30850,AT2G16200,AT4G18000,AT1G19410,AT1G76910,AT3G45500,AT1G67635,AT4G24600,AT5G39540,AT5G28950,AT3G30190,AT4G18080,AT3G30750,AT3G33080,AT1G37010,AT2G07290,AT4G20220,AT1G07330,AT3G43390,AT1G59171,AT5G44270,AT5G55010,AT3G19790,AT5G37050,AT5G40180,AT3G32050,AT2G31035,AT5G26970,AT5G37420,AT2G27340,AT1G72490,AT4G22600,AT1G64130,AT4G04480,AT1G63820,AT2G06630,AT1G43260,AT1G53260,AT4G40020,AT3G32100,AT5G06920,AT4G00280,AT3G43020,AT1G42360,AT5G32540,AT2G11650,AT2G16830,AT1G36820,AT1G40952,AT1G65400,AT2G10750,AT2G13675,AT2G20090,AT2G34550,AT2G40870,AT3G17610,AT3G26970,AT3G27812,AT3G52650,AT3G53660,AT4G39490,AT5G26718,AT5G29584,AT5G35850,AT5G44810 BABU_PPV-INFECTED-PROTOPLAST_UP Induced in PPV-infected Arabidopsis protoplasts at one time point and not repressed at other time points (Table S3 PubmedID:18613973) AT1G31540,AT2G24390,AT4G19470,AT4G30650,AT5G45200,AT3G14200,AT1G70720,AT2G44570,AT3G62180,AT4G33180,AT4G16590,AT1G32320,AT1G70110,AT3G26700,AT5G40030,AT5G61550,AT3G28780,AT3G43400,AT5G37630,AT5G65360,AT1G16330,AT1G49490,AT2G30810,AT3G63510,AT4G37900,AT5G35570,AT5G48850,AT5G49080,AT5G66970,AT1G13230,AT1G11080,AT1G14430,AT1G17330,AT1G24735,AT1G50270,AT1G50960,AT1G77910,AT2G27010,AT2G34980,AT3G01900,AT3G10570,AT3G21470,AT3G54250,AT5G08335,AT5G24140,AT5G55250,AT5G67520,AT1G21540,AT1G70930,AT2G42050,AT3G09080,AT3G53370,AT4G04260,AT4G15070,AT2G32470,AT3G05790,AT3G46860,AT5G15250,AT5G48690,AT1G28050,AT1G49900,AT1G55430,AT1G62110,AT1G77070,AT1G78750,AT2G13500,AT2G24570,AT2G26150,AT2G37580,AT3G18960,AT3G50870,AT4G00070,AT5G12400,AT5G15800,AT5G17800,AT5G49330,AT5G14610,AT1G20860,AT1G21070,AT3G25280,AT5G53520,AT4G22040,AT1G07795,AT1G15790,AT1G43570,AT1G59590,AT1G61240,AT1G73010,AT2G06180,AT2G10020,AT2G14410,AT2G15650,AT2G20625,AT2G45000,AT3G01730,AT3G09750,AT3G28440,AT3G42980,AT3G44450,AT4G03750,AT4G20750,AT4G28085,AT4G29770,AT4G34320,AT5G45460,AT5G51800,AT5G60880 BABU_PPV-INFECTED-PROTOPLAST_DN Repressed in PPV-infected Arabidopsis protoplasts at one time point and not induced at other time points (Table S3 PubmedID:18613973) AT2G34315,AT4G33730,AT5G18350,AT5G20630,AT1G56410,AT3G11210,AT3G16920,AT4G02290,AT4G35010,AT5G62340,AT1G22380,AT1G64450,AT4G37450,AT1G48480,AT1G52460,AT1G64480,AT3G22800,AT3G29060,AT5G51560,AT4G35520,AT5G19490,AT5G27550,AT1G26870,AT1G32770,AT1G52680,AT2G30400,AT3G18400,AT3G56560,AT4G09610,AT4G22500,AT5G06630,AT5G48600,AT5G24410,AT5G65800,AT1G09190,AT1G68750,AT2G18190,AT2G18450,AT2G26260,AT2G28050,AT2G29170,AT2G47020,AT3G09040,AT3G42960,AT3G49710,AT3G60900,AT4G25420,AT4G26460,AT4G28940,AT4G35650,AT5G36150,AT5G48010,AT5G48450,AT5G50140,AT5G67570,AT1G73360,AT2G46750,AT3G15270,AT3G27650,AT3G48360,AT3G53460,AT4G08150,AT4G28130,AT4G38480,AT1G32950,AT1G60570,AT1G64020,AT3G08810,AT3G17620,AT3G59190,AT4G11590,AT1G58330,AT1G68480,AT2G14160,AT2G16210,AT2G38185,AT2G44745,AT3G13228,AT3G27330,AT4G36620,AT5G15790,AT5G37260,AT5G46660,AT5G67110,AT5G27680,AT5G32630,AT1G67640,AT1G72140,AT2G37280,AT4G03950,AT1G37160,AT2G06870,AT2G07450,AT2G07685,AT2G11680,AT2G12240,AT2G13750,AT3G31970,AT4G03770,AT4G04170,AT4G07340,AT4G07660,AT4G07780,AT5G34840,AT1G06440,AT1G20520,AT1G27790,AT1G48200,AT1G60060,AT1G67635,AT1G76780,AT2G02690,AT2G03280,AT2G06630,AT2G06640,AT2G20616,AT2G27540,AT2G37720,AT2G42610,AT2G46980,AT3G14760,AT3G30450,AT3G43040,AT3G43150,AT3G43280,AT3G44140,AT3G50200,AT4G02160,AT4G03820,AT4G09470,AT4G11200,AT4G12630,AT4G13330,AT4G15050,AT4G22440,AT4G23496,AT4G24950,AT4G31400,AT5G02690,AT5G03400,AT5G11890,AT5G27020,AT5G35340,AT5G38770,AT5G46295,AT5G52900,AT5G57790,AT1G47885,AT1G51480,AT1G78220,AT2G23970,AT2G43660,AT4G11170,AT5G20330,AT5G38930,AT1G23205,AT2G04020,AT2G47280,AT3G18070,AT3G26140,AT3G43550,AT3G55680,AT4G10955,AT4G39010,AT5G04960,AT5G13520,AT5G14380,AT1G56530,AT1G70430,AT1G73690,AT1G79860,AT2G16620,AT3G15050,AT3G16490,AT3G21930,AT4G00460,AT5G10520,AT5G56580,AT5G58700,AT1G53690,AT2G21300,AT3G47660,AT4G24170,AT5G02570,AT5G10400,AT1G28270,AT1G69320,AT2G16835,AT2G18540,AT3G25905,AT3G48450,AT4G14060,AT5G07930,AT5G10230,AT5G55350,AT4G37770,AT1G13420,AT1G63150,AT1G66720,AT2G17580,AT2G38080,AT2G44800,AT3G14530,AT3G20110,AT4G15720,AT4G20240,AT4G31940,AT5G05260,AT5G24900,AT5G38970,AT5G56330,AT1G03700,AT4G05060,AT1G07620,AT1G55760,AT2G03110,AT2G20430,AT3G05310,AT3G07240,AT3G25990,AT3G27473,AT4G13380,AT4G15200,AT5G24820,AT5G37620,AT5G57200,AT3G49460,AT1G29080,AT1G31510,AT2G31470,AT4G05080,AT2G17920,AT2G37740,AT3G05860,AT3G06120,AT3G45480,AT4G12140,AT5G04400,AT5G26930,AT5G27610,AT5G54020,AT5G54070,AT1G10930,AT3G43350,AT1G18130,AT1G49810,AT3G44930,AT5G22910,AT1G26990,AT1G37110,AT1G41797,AT2G21460,AT2G31080,AT4G02960,AT4G08060,AT1G01180,AT1G24010,AT1G25025,AT1G39190,AT1G39750,AT1G51670,AT1G62060,AT1G67020,AT1G76230,AT2G04600,AT2G04820,AT2G04990,AT2G13920,AT2G16020,AT2G19140,AT2G25780,AT2G26050,AT2G46360,AT3G01015,AT3G01450,AT3G11150,AT3G28120,AT3G30220,AT3G31910,AT3G31915,AT3G43650,AT4G03680,AT4G03740,AT4G07920,AT4G09290,AT4G11020,AT4G17410,AT4G21950,AT4G23080,AT4G30090,AT4G39380,AT5G01150,AT5G02580,AT5G12450,AT5G24313,AT5G27170,AT5G28070,AT5G28190,AT5G34920,AT5G43550,AT5G48530,AT5G49370,AT5G59990 BABU_PPV-INFECTED-PROTOPLAST_PPA-INFECTED-LEAF_UP Induced in PPV-infected Arabidopsis protoplasts and in infected leaf tissues (Table S4 PubmedID:18613973) AT2G43660,AT2G44570,AT5G13520,AT5G45200,AT3G16490,AT1G66720,AT2G17580,AT3G10570,AT3G20110,AT4G31940,AT1G17330,AT1G21540,AT3G27473,AT4G13380,AT5G57200,AT5G15250,AT5G27610,AT2G37580,AT4G08060,AT2G31080,AT1G07795,AT1G14430,AT1G50270,AT1G56530,AT2G04820,AT2G45000,AT2G46360,AT3G30220,AT5G27170,AT5G43550,AT5G45460,AT5G48530 BABU_PPV-INFECTED-PROTOPLAST_PPA-INFECTED-LEAF_DN Repressed in PPV-infected Arabidopsis protoplasts and in infected leaf tissues (Table S5 PubmedID:18613973) AT2G04020,AT4G35010,AT4G35520,AT3G47660,AT1G28270,AT4G14060,AT2G44800,AT3G42960,AT4G03950,AT5G24410,AT5G38970,AT2G20430,AT4G08150,AT4G15200,AT5G24820,AT5G55450,AT3G06120,AT3G13228,AT2G21460,AT4G02960,AT4G07340,AT4G07780,AT5G19490,AT1G62060,AT1G67635,AT2G04990,AT2G06630,AT3G44140,AT4G09470,AT4G23496,AT5G24313,AT5G38770,AT5G46295 BABU_PPV-INFECTED-PROTOPLAST_RNA-VIRUSE_UP Induced by infections of PPV and other positive sense RNA viruses (Table S8 PubmedID:18613973) AT1G12010,AT5G20000,AT5G05780,AT2G37220,AT4G39980,AT5G23010,AT2G25450,AT1G79850,AT2G31610,AT3G14990,AT1G07320,AT3G44590,AT3G55130,AT5G64840,AT1G49240,AT2G38440,AT3G05420,AT4G27780,AT4G16760,AT3G23810,AT4G17330,AT1G54100,AT2G37770,AT1G11860,AT4G13510,AT2G38290,AT4G26370,AT5G65010,AT5G19550,AT3G54400,AT4G30190,AT2G42280,AT4G16430,AT4G36540,AT4G15210,AT2G26250,AT3G49680,AT5G62390,AT5G61790,AT1G56340,AT4G35090,AT5G01810,AT1G72830,AT5G47640,AT3G19820,AT5G05170,AT1G02205,AT5G13930,AT2G38000,AT2G28000,AT3G02530,AT3G51820,AT2G30490,AT2G44350,AT5G61900,AT4G37430,AT4G13770,AT4G37330,AT1G60420,AT3G58510,AT4G00660,AT2G47940,AT1G72040,AT5G23450,AT3G56940,AT4G33300,AT2G20560,AT3G44110,AT1G59610,AT4G24510,AT4G29060,AT4G20360,AT2G46280,AT1G26770,AT1G09340,AT1G18620,AT1G27200,AT1G56660,AT1G64680,AT1G71970,AT1G77500,AT1G79270,AT2G37660,AT3G04630,AT3G58600,AT3G63170,AT4G28080,AT4G28910,AT5G05250,AT3G17710,AT5G54160,AT3G52930,AT1G74470,AT1G31910,AT5G14920,AT2G13440,AT1G65960,AT5G04140,AT5G63570,AT4G23100,AT1G30400,AT1G78370,AT3G04120,AT2G26080,AT4G33010,AT4G37930,AT1G52400,AT2G18700,AT3G07160,AT5G56030,AT5G56000,AT1G56530,AT2G39050,AT5G09530,AT5G56650,AT5G10170,AT4G39240,AT3G16630,AT3G12740,AT1G28440,AT1G73080,AT5G28540,AT2G36830,AT5G09660,AT3G18830,AT5G12080,AT1G15340,AT4G34030,AT1G25380,AT2G43790,AT1G28010,AT1G05320,AT1G54010,AT5G17770,AT5G04950,AT1G37130,AT5G63310,AT5G64290,AT3G09300,AT3G54920,AT1G11580,AT4G33220,AT2G15690,AT3G04760,AT1G12470,AT2G42600,AT3G18000,AT5G56630,AT5G61580,AT1G01610,AT1G32060,AT3G19850,AT5G17870,AT1G76100,AT5G65260,AT2G40540,AT3G43720,AT1G21750,AT1G77510,AT3G08760,AT4G32250,AT5G02760,AT3G05640,AT4G01690,AT2G15190,AT2G46790,AT2G36580,AT1G19880,AT2G40760,AT2G39730,AT1G32490,AT5G54900,AT3G52380,AT4G17230,AT3G17410,AT3G58040,AT5G49530,AT5G53120,AT3G10420,AT5G66760,AT1G12520,AT1G22930,AT3G62770,AT5G24380,AT5G38530,AT1G20010,AT1G24100,AT2G38850,AT3G18890,AT1G21380,AT1G32230,AT1G68520,AT4G34100,AT2G25900,AT4G37910,AT2G47800,AT1G23800,AT5G09590,AT3G13380,AT1G09210,AT1G30700,AT5G59990 BABU_PPV-INFECTED_UP_RNA-VIRUSE_DN Induced during PPV infection but repressed by infections of other positive sense RNA viruses (Table S8 PubmedID:18613973) AT1G62380,AT3G53460,AT1G18450,AT5G64960,AT5G25610,AT4G10060,AT2G21330,AT5G35630,AT1G42970,AT5G65310,AT1G11840,AT5G47210,AT5G46390,AT1G21880,AT3G07100,AT1G15290,AT2G29630,AT5G01210,AT3G02660,AT5G67030,AT3G51950,AT1G09750,AT4G29020,AT2G37640,AT2G20750,AT2G32100,AT5G01240,AT2G26330,AT1G71695,AT5G03650,AT1G66150,AT4G32330,AT3G50650,AT5G15450,AT5G16820,AT4G24280,AT5G23570,AT2G20610,AT1G10290,AT5G49910,AT4G31670 BABU_PPV-INFECTED_DN_RNA-VIRUSE_UP Repressed during PPV infection but induced by infections of other positive sense RNA viruses (Table S8 PubmedID:18613973) AT1G59860,AT4G21870,AT1G33850,AT1G66580,AT5G27850,AT1G57660,AT1G69700,AT5G54720,AT4G03450,AT1G64380,AT4G09030,AT4G12790,AT3G28930,AT4G14410,AT3G13790,AT3G47650,AT5G39670,AT1G21550,AT2G41100,AT2G43290,AT3G50770,AT2G30360,AT2G04690,AT4G01700,AT4G10340,AT1G71697,AT4G16500,AT2G26500,AT2G41430,AT1G72900,AT1G68840,AT3G14200,AT3G21840,AT3G25040,AT5G47230,AT4G17490,AT1G56580,AT5G62520,AT5G59080,AT5G53160,AT5G46295,AT5G22270,AT5G12010,AT3G60910,AT3G10930,AT3G22240,AT3G08610,AT1G67910,AT1G67920,AT1G69610,AT2G24550,AT1G55480,AT2G36630,AT2G32190,AT2G34600,AT2G44090,AT2G23120,AT4G08980,AT1G77810,AT5G45950,AT1G28480,AT2G31570,AT1G02930,AT4G19880,AT3G04640,AT1G74230,AT4G22720,AT1G70090,AT3G04720,AT5G49590,AT2G06630,AT1G52240,AT4G02380,AT1G01470,AT5G24210,AT4G21830,AT4G21850,AT4G04830,AT1G65820,AT2G22500,AT1G61990,AT3G09940,AT2G37130,AT3G18160,AT2G20260,AT1G30380,AT1G52230,AT2G30570,AT5G65870,AT1G20340,AT1G10640,AT5G40670,AT4G07390,AT4G12480,AT4G11890,AT4G28400,AT2G16830,AT1G57990,AT1G23440,AT3G44860,AT5G45890,AT4G21390,AT5G49480,AT4G34190,AT3G16050,AT3G27380,AT4G32150,AT3G52400,AT1G19050,AT1G22400,AT3G17610,AT1G78410,AT5G57530,AT4G28270,AT2G14560,AT2G42360,AT4G23150,AT3G48360,AT5G58700 BABU_PPV-INFECTED_DN_RNA-VIRUSE_OTHER-POSITIVE-SENSE Repressed by infections of PPV and other positive sense RNA viruses (Table S8 PubmedID:18613973) AT1G67050,AT5G02160,AT5G38980,AT5G17650,AT4G25490,AT5G65730,AT3G52590 BABU_PPV-INFECTED_UP_RNA-VIRUSE_DIFF Induced during PPV infection but either induced or suppressed by infections of other positive sense RNA viruses (Table S8 PubmedID:18613973) AT4G39950,AT5G19120,AT1G19180,AT1G13090,AT4G34390,AT5G02490,AT3G12580,AT4G16660,AT5G52640,AT1G80440,AT1G62510,AT1G62570,AT5G02500,AT5G50920,AT1G78900,AT5G51070,AT5G53950,AT1G64780,AT4G19390,AT3G46780,AT1G24280,AT4G38770,AT4G24190,AT3G09440,AT1G17020 BABU_PPV-INFECTED_DN_DURING-RNA-VIRUSE_UP Repressed during PPV infection but induced during infections of more than one positive sense RNA virus (Table S8 PubmedID:18613973) AT2G32680,AT5G61600,AT3G57260,AT5G20230,AT4G23140,AT2G15390,AT1G23710,AT2G30590,AT2G41110,AT4G10040,AT5G59820,AT1G45145,AT3G54420,AT1G75040,AT1G65500,AT4G39670,AT2G29460,AT2G26150,AT2G33240,AT4G27280,AT2G23090,AT2G22860 TANG_BRM-5/ESSP3_LEAVES_UP Up-regulated in brm-5/essp3 Leaves (Table S1 PubmedID:18508955) AT1G26230,AT3G13470,AT2G43620,AT3G47540,AT2G45570,AT3G28740,AT1G64950,AT4G12310,AT3G56080,AT3G14460,AT5G58120,AT4G15910,AT4G15430,AT1G28570,AT1G28610,AT1G54790,AT3G04290,AT3G05180,AT4G28780,AT5G15720,AT5G45950,AT5G20630,AT3G10080,AT5G38960,AT1G59700,AT1G78320,AT1G10370,AT3G04640,AT4G29030,AT4G33440,AT1G66280,AT3G06510,AT5G24540,AT1G66250,AT1G18310,AT4G27570,AT2G33255,AT3G48420,AT5G59480,AT5G62020,AT3G12580,AT5G52640,AT3G10840,AT4G12830,AT5G19850,AT5G38520,AT1G05770,AT1G52000,AT5G03350,AT5G14130,AT5G22410,AT2G24980,AT3G28550,AT1G60270,AT3G14050,AT2G29500,AT5G15960,AT5G51100,AT2G41680,AT2G19070,AT5G41040,AT3G02480,AT1G64480,AT1G07010,AT4G27280,AT5G54130,AT5G23580,AT1G50700,AT5G10680,AT1G76640,AT3G21870,AT5G07450,AT1G70985,AT4G38080,AT4G02410,AT4G02420,AT5G01550,AT5G12940,AT1G49490,AT5G59680,AT5G52480,AT2G24230,AT3G42880,AT4G20140,AT5G67280,AT2G17170,AT3G07070,AT4G23240,AT5G38990,AT5G53450,AT1G15530,AT3G08730,AT1G78290,AT2G43230,AT1G19390,AT3G12110,AT4G00680,AT5G61070,AT5G35600,AT5G22880,AT1G09200,AT5G10470,AT5G23910,AT3G47640,AT4G00050,AT5G50915,AT5G65640,AT1G68640,AT3G53340,AT1G01520,AT3G09600,AT3G50060,AT5G17300,AT5G37260,AT1G32240,AT2G46830,AT3G02150,AT1G64000,AT1G80840,AT2G47260,AT4G23810,AT5G49520,AT2G31380,AT1G14580,AT5G59820,AT5G27420,AT5G60250,AT3G02830,AT3G55980,AT4G26150,AT5G25830,AT5G15850,AT3G18290,AT5G20220,AT5G63070,AT5G12110,AT1G62750,AT1G67420,AT1G71810,AT3G24190,AT5G64940,AT2G26900,AT3G27170,AT3G46900,AT4G05110,AT2G34660,AT1G71680,AT1G55910,AT3G51870,AT4G24570,AT4G27940,AT3G21670,AT2G38530,AT5G67330,AT1G71480,AT4G16370,AT2G36590,AT2G40460,AT3G01350,AT3G47960,AT5G43610,AT5G13740,AT2G48020,AT3G51895,AT3G12520,AT1G79410,AT3G01550,AT4G27150,AT4G27160,AT5G54740,AT1G76530,AT5G13320,AT1G02205,AT2G42530,AT4G36700,AT3G50970,AT5G62210,AT1G62500,AT5G38160,AT5G48490,AT1G04770,AT3G63510,AT1G33280,AT3G04420,AT3G53210,AT5G65510,AT3G23270,AT3G22550,AT4G11280,AT4G08040,AT1G04520,AT1G51680,AT1G20500,AT4G04610,AT4G21990,AT5G64580,AT5G48880,AT1G30520,AT4G22570,AT1G62180,AT3G23810,AT5G15950,AT2G37790,AT5G53580,AT5G01670,AT3G09580,AT3G13620,AT3G16910,AT1G80660,AT4G17090,AT5G18670,AT4G00490,AT4G25700,AT5G52570,AT2G10630,AT1G33130,AT4G04100,AT3G42220,AT2G38010,AT5G13930,AT1G80820,AT3G19450,AT3G24770,AT1G31690,AT1G63440,AT3G23510,AT3G03630,AT3G19480,AT1G70070,AT3G02590,AT2G20900,AT3G55630,AT5G46280,AT2G27120,AT3G51810,AT1G64390,AT1G06350,AT3G15850,AT3G16250,AT5G49730,AT1G23020,AT5G45180,AT4G11350,AT1G72030,AT4G19985,AT1G17050,AT5G24420,AT1G70580,AT1G64500,AT4G31870,AT2G26080,AT4G33010,AT4G13890,AT5G06330,AT2G35960,AT4G15440,AT2G26800,AT1G23205,AT2G47050,AT5G20740,AT5G38550,AT1G27480,AT3G45140,AT5G45930,AT5G18290,AT4G23680,AT3G53910,AT1G33110,AT2G04070,AT3G21690,AT1G68890,AT5G63420,AT2G29720,AT4G25240,AT2G12150,AT5G20070,AT5G16980,AT5G17000,AT3G51240,AT1G59660,AT4G23900,AT1G12550,AT3G46490,AT1G14150,AT3G01440,AT1G73110,AT2G39220,AT1G67750,AT4G02330,AT4G15370,AT1G06270,AT1G09220,AT1G23450,AT1G31920,AT1G64100,AT1G76280,AT3G26630,AT4G31850,AT5G02830,AT5G13770,AT5G35210,AT5G46390,AT3G57190,AT5G14660,AT1G74070,AT5G48570,AT5G03555,AT2G42770,AT3G54090,AT4G02850,AT2G37040,AT1G35140,AT1G15080,AT3G14940,AT4G24340,AT4G24350,AT3G16360,AT2G39470,AT4G28660,AT5G09820,AT1G10640,AT1G60590,AT1G21650,AT4G03700,AT1G56345,AT4G08700,AT2G01890,AT1G07180,AT4G33070,AT5G47910,AT5G59750,AT3G27060,AT2G35340,AT4G16680,AT3G21300,AT5G24120,AT2G04530,AT3G44860,AT5G55250,AT2G23000,AT2G17845,AT1G13890,AT5G58180,AT1G28560,AT5G24150,AT5G24160,AT4G37760,AT4G22753,AT3G58890,AT1G01320,AT5G49030,AT4G33760,AT2G19120,AT2G20340,AT3G02800,AT1G69523,AT1G06000,AT2G30150,AT2G31750,AT2G36790,AT3G02100,AT5G17050,AT1G05560,AT2G29890,AT2G21860,AT4G30290,AT2G25830,AT1G25510,AT1G61340,AT3G44080,AT3G49510,AT4G13960,AT4G17200,AT1G71290,AT4G23940,AT2G24540,AT4G18370,AT2G38870,AT1G32970,AT4G10520,AT4G15040,AT5G44530,AT5G45650,AT2G43550,AT5G65890,AT5G52020,AT1G63030,AT4G28140,AT5G67180,AT3G51780,AT1G70370,AT1G76570,AT4G14690,AT1G19150,AT3G45450,AT3G62410,AT3G27490,AT1G76380,AT2G42150,AT1G70000,AT2G33620,AT2G36080,AT5G51590,AT1G11040,AT2G42750,AT1G51700,AT5G54880,AT4G17490,AT2G38210,AT5G23350,AT1G56050,AT1G76110,AT4G34610,AT3G20270,AT3G26620,AT1G09080,AT3G28220,AT4G04840,AT5G42760,AT1G22480,AT3G01210,AT2G21690,AT1G55490,AT1G12800,AT1G17100,AT1G78450,AT2G42200,AT5G23730,AT3G57040,AT1G29340,AT1G60190,AT3G18710,AT1G61210,AT1G53090,AT3G15680,AT5G67370,AT5G66650,AT5G66470,AT5G63100,AT5G62140,AT5G61820,AT5G58260,AT5G57785,AT5G56850,AT5G54120,AT5G52420,AT5G49640,AT5G42960,AT5G39210,AT5G24660,AT5G23060,AT5G19240,AT5G19260,AT5G05180,AT5G05250,AT5G02940,AT5G02710,AT5G01015,AT3G61100,AT3G60440,AT3G56360,AT3G56260,AT3G56290,AT4G33666,AT4G29590,AT4G28740,AT4G26850,AT4G27030,AT4G24175,AT4G21210,AT4G18810,AT4G12970,AT4G12000,AT2G40475,AT1G18060,AT1G13650,AT3G11160,AT3G22240,AT3G52360,AT3G19030,AT3G12870,AT3G24430,AT1G23550,AT1G55360,AT3G15550,AT3G06020,AT3G09860,AT3G03950,AT3G01060,AT1G73650,AT2G43630,AT1G55960,AT1G32520,AT1G47400,AT1G15980,AT1G50450,AT1G48300,AT1G34245,AT1G62780,AT1G64980,AT1G64700,AT1G14760,AT1G79510,AT2G04039,AT2G31740,AT1G10410,AT1G65490,AT2G17920,AT1G24310,AT2G42900,AT2G28305,AT2G25625,AT2G34640,AT2G39870,AT2G40000,AT2G40080,AT2G32640,AT1G44222,AT5G62110,AT5G03130,AT3G54060,AT4G18000,AT3G06280,AT3G23850,AT1G63190,AT3G25080,AT1G42400,AT2G46380,AT2G22440,AT1G76910,AT1G62530,AT2G24410,AT2G18070,AT2G24255,AT2G03320,AT5G29040,AT5G63430,AT4G33525,AT1G01330,AT1G02200,AT1G70240,AT2G39150 TANG_BRM-5/ESSP3_LEAVES_DN Downregulated in brm-5/essp3 Leaves (Table S2 PubmedID:18508955) AT1G20630,AT2G07718,AT3G26210,AT5G05690,AT3G26280,AT1G28430,AT2G45510,AT2G26710,AT2G43200,AT1G51280,AT4G16990,AT5G45490,AT2G23610,AT3G62860,AT1G08310,AT1G75880,AT5G39110,AT2G02930,AT5G17650,AT4G15150,AT5G28630,AT4G21620,AT1G67870,AT1G04800,AT2G22660,AT2G05540,AT5G55700,AT1G02640,AT5G07830,AT4G39010,AT5G08000,AT1G60140,AT4G17750,AT1G67970,AT4G10030,AT2G39400,AT1G53580,AT5G14180,AT1G09415,AT1G75030,AT1G71695,AT2G37130,AT5G06730,AT3G49120,AT2G28440,AT2G36120,AT4G37220,AT1G29390,AT1G29395,AT1G08830,AT2G28190,AT1G12520,AT5G06690,AT2G15570,AT5G24270,AT5G63140,AT3G10300,AT2G41560,AT5G04020,AT5G57630,AT1G12730,AT4G09760,AT1G68740,AT1G35350,AT5G14470,AT2G47930,AT3G14010,AT2G15880,AT1G53440,AT5G01950,AT2G18170,AT4G21410,AT1G52540,AT2G07180,AT5G11400,AT3G23650,AT5G38210,AT1G51690,AT2G16790,AT5G59440,AT1G21270,AT2G18050,AT2G28720,AT5G27950,AT1G05320,AT1G22490,AT4G36930,AT5G15830,AT3G24050,AT3G51910,AT4G24540,AT5G27580,AT5G08520,AT2G21650,AT1G13300,AT1G75250,AT4G34990,AT1G08810,AT4G18020,AT5G24470,AT3G42830,AT1G56010,AT5G14960,AT5G07100,AT4G31805,AT3G01970,AT2G36320,AT2G33500,AT2G01940,AT5G03150,AT1G55110,AT2G18670,AT4G27470,AT1G32340,AT1G76410,AT5G10380,AT1G13195,AT4G17245,AT4G02075,AT5G01070,AT1G22500,AT2G18650,AT4G03510,AT2G32930,AT5G44260,AT5G27280,AT2G45050,AT3G60530,AT5G50450,AT3G28500,AT2G07725,AT3G62290,AT3G22860,AT1G13950,AT1G07830,AT1G59870,AT5G52860,AT4G28390,AT5G63850,AT2G40420,AT4G04770,AT4G22840,AT5G15530,AT5G24030,AT1G12480,AT4G31290,AT5G26340,AT1G08090,AT2G32830,AT5G46240,AT5G40780,AT4G36670,AT1G60960,AT1G10970,AT1G05300,AT1G69850,AT5G14940,AT1G73220,AT5G10180,AT1G23090,AT4G24120,AT3G05020,AT3G12830,AT3G09870,AT4G27260,AT2G21200,AT5G15800,AT1G56220,AT2G33830,AT1G28330,AT5G01600,AT2G40300,AT1G75750,AT1G22690,AT3G53040,AT5G55450,AT4G12470,AT4G12490,AT1G62510,AT4G12480,AT1G25580,AT2G33480,AT3G04070,AT5G07680,AT5G39610,AT1G69490,AT4G27410,AT2G28120,AT4G28040,AT4G08290,AT4G01430,AT1G01070,AT2G39510,AT5G50790,AT1G76800,AT4G33490,AT2G36050,AT1G79700,AT2G41710,AT3G10460,AT5G66040,AT4G35770,AT1G53885,AT3G63230,AT1G19200,AT4G27330,AT1G21980,AT5G23020,AT3G13450,AT1G21400,AT5G21170,AT2G31810,AT2G39920,AT3G17790,AT2G05710,AT3G02630,AT5G16240,AT5G67520,AT1G54100,AT4G25900,AT4G22330,AT5G09220,AT5G49630,AT1G31820,AT5G01240,AT1G35230,AT3G47340,AT1G09430,AT4G21980,AT2G45170,AT3G01290,AT2G40330,AT4G15210,AT1G22650,AT5G56870,AT2G28630,AT1G10070,AT4G15290,AT5G64920,AT4G04410,AT4G12280,AT3G43670,AT5G15410,AT4G18930,AT1G64660,AT4G39090,AT5G05450,AT3G05740,AT1G80420,AT5G03540,AT5G33290,AT2G18660,AT2G46720,AT4G34250,AT2G15620,AT5G07990,AT5G14780,AT1G78670,AT5G07440,AT5G64050,AT4G15700,AT1G03850,AT4G15690,AT5G63030,AT5G08030,AT3G02040,AT1G38340,AT3G04720,AT5G54080,AT3G05890,AT3G62820,AT3G45300,AT1G08630,AT5G21105,AT4G08390,AT2G22170,AT2G47240,AT4G33150,AT3G09390,AT1G03090,AT2G14170,AT5G45550,AT4G38540,AT3G05850,AT2G23500,AT1G54020,AT1G09240,AT4G16770,AT5G58660,AT4G19420,AT2G26440,AT4G14850,AT2G03890,AT1G77660,AT1G02390,AT3G29810,AT5G02200,AT2G22860,AT3G49780,AT2G38360,AT4G27440,AT1G25230,AT1G14700,AT1G27980,AT5G60460,AT4G13250,AT5G02540,AT3G50660,AT3G51430,AT3G27380,AT1G79440,AT5G20280,AT5G43780,AT3G45070,AT2G33120,AT5G05760,AT2G34590,AT5G37030,AT2G43370,AT2G44790,AT2G29730,AT1G12780,AT1G55810,AT3G27190,AT3G22160,AT1G32170,AT5G57655,AT5G61020,AT1G05840,AT1G62290,AT2G40880,AT1G77000,AT3G18980,AT2G04840,AT5G27920,AT5G25350,AT1G51550,AT3G42770,AT1G47300,AT5G01720,AT5G52120,AT4G03030,AT1G15670,AT3G18060,AT1G24530,AT1G80670,AT4G36410,AT2G33770,AT2G39570,AT1G68580,AT1G21540,AT3G23790,AT5G16340,AT1G53910,AT3G14230,AT5G61590,AT5G67000,AT5G53290,AT1G23140,AT5G10860,AT3G48530,AT4G38680,AT2G21060,AT2G28660,AT3G07000,AT2G45850,AT4G12080,AT3G61260,AT4G35900,AT3G13310,AT5G05750,AT1G56300,AT1G80920,AT4G13830,AT1G72360,AT1G67810,AT1G75200,AT2G32390,AT1G02620,AT1G22990,AT5G63190,AT3G20370,AT4G01390,AT5G52330,AT5G35330,AT5G06140,AT1G72230,AT1G63040,AT3G12160,AT1G78260,AT1G29400,AT4G27000,AT5G24440,AT1G76890,AT1G27290,AT4G28180,AT5G18130,AT1G10250,AT2G17540,AT3G18560,AT4G17940,AT5G44250,AT5G64180,AT5G57760,AT4G17070,AT1G47970,AT2G31110,AT2G37330,AT3G49310,AT3G02910,AT3G20300,AT1G55265,AT3G47295,AT1G09810,AT3G10980,AT1G75140,AT5G19860,AT2G42040,AT1G33055,AT5G45500,AT3G51720,AT2G21080,AT4G33960,AT4G14270,AT1G60610,AT2G46900,AT1G01240,AT1G11210,AT5G20790,AT2G42870,AT2G32210,AT1G13990,AT5G02720,AT3G14595,AT2G15890,AT3G20510,AT4G16850,AT3G08890,AT2G31120,AT4G19430,AT4G16060,AT2G01070,AT3G59490,AT5G50200,AT1G06980,AT5G18490,AT1G24575,AT3G27210,AT2G18410,AT1G12400,AT5G39520,AT1G28260,AT2G19800,AT5G57340,AT2G14560,AT4G27450,AT1G49940,AT5G22310,AT1G68650,AT2G15960,AT5G56220,AT2G03550,AT5G56250,AT5G12050,AT3G20340,AT2G43060,AT1G14870,AT1G73120,AT1G07040,AT4G32340,AT3G01730,AT1G28070,AT1G54740,AT1G17710,AT2G37480,AT4G10910,AT1G75110,AT1G52200,AT3G19660,AT1G55240,AT5G64190,AT5G35690,AT2G46490,AT1G07680,AT4G08270,AT5G01150,AT1G02320,AT2G10920,AT5G56570,AT4G04650,AT3G42430,AT5G28270,AT4G36560,AT2G23480,AT2G27160,AT5G33260,AT2G06220,AT3G09460,AT2G37490,AT1G31700,AT1G15045 TANG_SEED_BRM-5-LEAVES_UP Up-regulated genes selected seed-related in brm-5 leaves as revealed by microarray analysis (Table 1 PubmedID:18508955) AT4G27150,AT4G27160,AT5G54740,AT4G36700,AT5G38160,AT2G38530,AT1G62500,AT5G48490,AT3G08770,AT3G45140,AT3G51810,AT4G16370,AT3G18290,AT5G24120,AT2G27120,AT5G63420 LI_5-POINT_SD-DIURNAL-CYCLE_DIFF Significantly-expression across genotypes over the five time points during the SD diurnal cycle. (Table S1 PubmedID:19154206) AT1G11720,AT5G65685,AT2G18700,AT4G17770,AT5G18670,AT1G70290,AT4G39210,AT1G61800,AT1G32900,AT1G03310,AT4G09020,AT1G74910,AT1G23870,AT3G20040,AT4G22590,AT4G00490,AT5G16150 SUGIO_CPR_UP Up-regulated by CPR (Table S1 PubmedID:19244141) AT5G12030,AT5G48570,AT1G71000,AT5G51440,AT1G74310,AT2G20560,AT2G29500,AT3G46230,AT3G12580,AT1G53540,AT3G16050,AT5G12020,AT1G66080,AT4G25200,AT5G52640,AT1G54050,AT4G12400,AT5G37670,AT5G02490,AT2G32120,AT3G13470,AT3G14200,AT4G28480,AT1G01940,AT2G26150,AT3G51910,AT3G24500,AT5G12110,AT5G05410,AT2G38340,AT1G07350,AT5G62020,AT4G11660,AT5G04840,AT4G36990,AT1G09140,AT1G31280,AT1G55300,AT5G10550,AT3G55580,AT1G55310,AT2G46780,AT4G34680,AT1G18330,AT1G11100,AT1G01720,AT1G26800,AT1G14200,AT5G55970,AT1G55530,AT1G10230,AT1G61340,AT5G18340,AT3G18710,AT1G57820,AT5G66070 SUGIO_HEAT-SHOCK&TUNICAMYCIN_UP Up-regulated by heat-shock and tunicamycin (Dataset1 PubmedID:19244141) AT5G24850,AT3G54000,AT2G32920,AT5G64180 SUGIO_HEAT-SHOCK&TUNICAMYCIN_DN Down-regulated by heat-shock and tunicamycin (Dataset1 PubmedID:19244141) AT5G55930,AT3G51450,AT1G11260 SUGIO_AZC_UP Up-regulated by AZC (Dataset1 PubmedID:19244141) AT2G26530,AT2G23320,AT2G41640,AT5G12340,AT4G17490,AT4G17500,AT4G14420,AT4G14430,AT5G04340,AT1G35210,AT5G09430,AT5G09470,AT3G56880,AT1G51860,AT5G16110,AT5G26920,AT5G25930,AT5G26030,AT5G67340,AT5G67450,AT5G66650,AT5G66320,AT5G64870,AT5G64905,AT5G62860,AT5G59820,AT5G59550,AT5G56270,AT5G56340,AT5G53590,AT5G52830,AT5G52670,AT5G47910,AT5G47850,AT5G47050,AT5G46780,AT5G46295,AT5G44910,AT5G44060,AT5G42830,AT5G41100,AT5G40180,AT5G38310,AT5G24110,AT5G22540,AT5G22530,AT5G22390,AT5G14700,AT5G13200,AT5G13190,AT5G11000,AT5G09800,AT5G07730,AT5G06320,AT5G05850,AT5G03390,AT5G02220,AT5G01540,AT5G01830,AT5G01550,AT5G01560,AT3G62960,AT3G62760,AT3G61630,AT3G60540,AT3G59700,AT3G59080,AT3G57450,AT3G57550,AT3G55980,AT3G55950,AT3G55150,AT3G53810,AT3G53600,AT3G52800,AT3G53000,AT3G51990,AT3G52400,AT3G50770,AT3G50650,AT3G50060,AT3G48450,AT3G47550,AT3G46110,AT3G45060,AT3G44720,AT4G39890,AT4G40080,AT4G39640,AT4G39030,AT4G33985,AT4G33180,AT4G33050,AT4G32020,AT4G31550,AT4G30280,AT4G30450,AT4G29780,AT4G29440,AT4G28703,AT4G28350,AT4G27280,AT4G26120,AT4G26150,AT4G25350,AT4G25390,AT4G25030,AT4G24570,AT4G24380,AT4G24240,AT4G24160,AT4G23190,AT4G21390,AT4G18880,AT4G18890,AT4G12720,AT4G09030,AT4G01250,AT1G07160,AT1G07240,AT1G20823,AT1G51620,AT1G51820,AT1G51700,AT1G30110,AT1G30370,AT1G54890,AT1G66780,AT3G10985,AT3G28850,AT3G19970,AT3G25610,AT3G16860,AT3G22930,AT3G19030,AT3G24050,AT3G13430,AT3G21070,AT3G19130,AT1G23550,AT1G16130,AT3G18690,AT3G26680,AT3G25210,AT3G25250,AT3G17130,AT3G23230,AT3G21780,AT3G25900,AT3G24550,AT3G21560,AT3G15680,AT3G17690,AT3G02550,AT3G04220,AT3G08720,AT3G01830,AT3G01820,AT3G03550,AT3G01290,AT3G05320,AT1G13340,AT1G01480,AT1G02400,AT1G19020,AT1G56345,AT1G29690,AT1G68440,AT1G67920,AT1G30040,AT1G68840,AT1G63750,AT1G80280,AT1G63930,AT1G69270,AT1G74100,AT1G72520,AT1G69840,AT1G68330,AT1G68340,AT1G11050,AT1G19320,AT1G19310,AT1G21900,AT1G17380,AT1G07520,AT1G75440,AT1G79580,AT1G21120,AT1G14540,AT1G27730,AT1G47400,AT1G18380,AT1G08500,AT1G76070,AT1G50640,AT1G80820,AT1G56060,AT1G78080,AT1G68690,AT1G31350,AT1G15430,AT1G06520,AT1G06630,AT1G16420,AT1G13210,AT1G21010,AT1G59910,AT1G05575,AT2G40180,AT2G40140,AT2G40170,AT2G31940,AT2G31730,AT2G24570,AT2G35930,AT2G35910,AT2G22500,AT1G22650,AT1G22810,AT1G67470,AT1G61800,AT1G27360,AT2G17740,AT1G70140,AT1G62300,AT1G61360,AT1G24140,AT1G76970,AT2G36690,AT2G16720,AT2G14290,AT2G32020,AT2G32030,AT2G35710,AT2G37430,AT2G18650,AT2G29450,AT2G41410,AT2G46150,AT2G03120,AT2G46735,AT2G03110,AT2G47140,AT2G47060,AT2G44840,AT2G39380,AT2G39420,AT2G39200,AT2G38470,AT2G38465,AT2G41100,AT2G41490,AT2G14850,AT2G23810,AT2G44370,AT2G33710,AT2G30540,AT2G39650,AT2G39660 SUGIO_AZC_DN Down-regulated by AZC (Dataset1 PubmedID:19244141) AT2G26510,AT2G39780,AT1G67830,AT4G16190,AT4G13990,AT5G19530,AT5G19590,AT5G13140,AT5G20650,AT5G08380,AT5G20500,AT5G67130,AT5G65760,AT5G65730,AT5G64470,AT5G63800,AT5G63190,AT5G62280,AT5G60640,AT5G60360,AT5G58090,AT5G56100,AT5G52900,AT5G50915,AT5G49945,AT5G47560,AT5G45420,AT5G41870,AT5G24490,AT5G22860,AT5G22740,AT5G11420,AT5G11280,AT5G10560,AT5G07030,AT5G04490,AT5G01620,AT5G01600,AT3G63200,AT3G62110,AT3G59940,AT3G59220,AT3G56310,AT3G54720,AT3G51610,AT3G51420,AT3G49720,AT3G49930,AT3G49160,AT3G46130,AT3G43670,AT4G39730,AT4G39040,AT4G38050,AT4G34760,AT4G33666,AT4G33540,AT4G30993,AT4G28050,AT4G27080,AT4G26620,AT4G24120,AT4G22756,AT4G19410,AT4G13640,AT4G13630,AT1G58360,AT1G07080,AT3G11280,AT1G66140,AT3G28200,AT3G21870,AT3G14210,AT3G22104,AT3G23080,AT3G19400,AT3G16200,AT3G16250,AT3G18050,AT3G17840,AT3G15380,AT3G06510,AT3G07990,AT3G08030,AT3G08550,AT3G08680,AT3G06450,AT3G07310,AT3G04940,AT3G05100,AT3G05180,AT1G02305,AT1G19000,AT1G20650,AT1G20560,AT1G27980,AT1G76800,AT1G72680,AT1G68520,AT1G63690,AT1G69780,AT1G47260,AT2G47320,AT2G43820,AT1G19740,AT1G35720,AT1G48440,AT1G18700,AT1G01070,AT1G49750,AT1G49740,AT1G08470,AT1G30520,AT1G11545,AT1G64650,AT1G02850,AT2G01070,AT1G68570,AT1G64190,AT1G34760,AT1G47640,AT1G15180,AT1G76020,AT2G31390,AT2G04240,AT2G04280,AT1G60140,AT1G60160,AT1G09240,AT1G70370,AT1G12050,AT1G61770,AT1G09390,AT1G09850,AT1G05070,AT2G28350,AT2G05790,AT2G37130,AT2G35780,AT2G18050,AT2G05920,AT2G37790,AT2G29290,AT2G29320,AT2G38530,AT2G35500,AT2G46930,AT2G29090,AT2G29960,AT2G32580,AT2G44150,AT2G44210,AT2G33860,AT2G26680 SUGIO_TUNICAMYCIN_UP Up-regulated by tunicamycin (Dataset1 PubmedID:19244141) AT1G56580,AT5G64060,AT5G58710,AT5G22290,AT3G51000,AT3G50860,AT4G35780,AT4G21730,AT1G42480,AT3G12840,AT3G16990,AT3G15980,AT1G67960,AT1G70490,AT1G18830,AT1G52590,AT1G52600,AT1G10522,AT1G11890,AT1G77280,AT2G29260,AT2G45790 SUGIO_TUNICAMYCIN_DN Down-regulated by tunicamycin (Dataset1 PubmedID:19244141) AT1G51850,AT5G64120,AT4G27730,AT4G21410,AT3G22060,AT2G43620,AT1G64170,AT2G26150 SUGIO_HEAT-SHOCK_UP Up-regulated by heat-shock (Dataset1 PubmedID:19244141) AT1G55255,AT1G19140,AT5G52020,AT5G17410,AT5G41610,AT5G04540,AT5G43850,AT3G20180,AT3G11600,AT2G07000,AT5G62540,AT3G63440,AT2G27100,AT4G15620,AT5G11730,AT1G80230,AT5G23750,AT2G30280,AT2G36750,AT5G50210,AT4G03120,AT5G27760,AT5G64190,AT3G06540,AT2G19630,AT5G09930,AT5G18420,AT5G13310,AT3G61180,AT1G51310,AT2G15040,AT5G54690,AT2G20550,AT1G33340,AT1G53180,AT5G47090,AT5G47160,AT4G12010,AT1G73750,AT3G47680,AT1G18750,AT2G42400,AT1G21760,AT1G24340,AT5G60610,AT4G14190,AT4G02410,AT5G43440,AT1G05385,AT5G25520,AT1G19980,AT1G80780,AT2G22090,AT5G20060,AT2G34590,AT4G00900,AT5G17650,AT1G18030,AT2G02760,AT2G25920,AT1G62010,AT1G21350,AT5G37710,AT1G50590,AT3G57760,ATMG01060,AT3G07370,AT1G19010,AT5G46470,AT1G78380,AT5G51410,AT5G11760,AT1G70780,AT4G20380,AT2G18410,AT5G64960,AT4G00231,AT5G59830,AT2G04520,AT1G22960,AT4G30940,AT1G75270,ATMG01040,AT3G56740,AT4G19440,AT2G42150,AT1G33770,AT3G14570,AT5G53970,AT5G25080,AT4G24410,AT1G48970,AT2G40300,AT4G12120,AT1G60470,AT4G29790,AT5G41820,AT3G20300,AT3G48880,AT2G15310,ATMG01410,AT1G03180,AT5G57610,AT3G51500,AT3G06760,AT3G10700,AT2G14880,AT1G65560,AT5G37770,AT5G25840,AT3G04120,AT3G54320,AT3G02860,AT3G01210,AT3G10120,AT2G25790,AT5G62200,AT5G42740,AT2G41500,AT3G20810,AT1G18650,AT3G02480,AT1G11400,AT2G34450,AT2G07728,AT4G25700,AT1G32090,AT3G27380,AT5G25770,AT4G11220,AT4G26140,AT4G02210,AT5G55830,AT5G54640,AT1G63010,AT2G20950,AT5G23340,AT1G09160,AT4G36020,AT4G08950,AT1G73040,AT4G29670,AT4G30460,AT1G18740,AT5G25560,AT5G37680,AT5G67310,AT3G63400,AT5G57370,AT1G69680,AT2G27200,AT5G04750,AT3G02555,AT5G56600,AT4G24730,AT3G22090,AT5G11100,AT5G23130,AT1G45976,AT4G36290,AT1G08570,AT1G08460,AT5G09390,AT3G09980,ATMG00890,AT5G03370,AT1G63030,AT2G38560,AT4G25830,AT3G26450,AT5G17850,AT3G17740,AT1G26580,AT1G32330,AT1G72760,AT1G07370,AT3G63150,AT3G18850,AT1G28760,AT2G40830,AT5G51460,AT5G51770,AT5G40930,AT3G60190,AT4G00090,AT5G15330,AT5G15090,AT1G30200,AT5G17360,AT1G19025,AT1G19230,AT4G36730,AT4G26520,AT2G21560,ATMG01180,AT2G19450,AT2G09840,AT2G21210,AT5G23380,AT3G50670,AT4G21580,AT1G68585,AT5G48180,AT3G04810,AT1G64185,AT1G09230,AT3G60910,AT2G42010,AT5G43330,AT1G03970,AT2G41630,AT2G21510,AT1G35730,AT5G57880,AT3G10390,AT4G33940,AT1G10020,AT5G19875,AT2G41010,AT5G10690,AT2G37770,AT5G12080,AT1G79640,AT4G01280,AT5G15350,AT4G17260,AT3G49590,AT5G35460,AT4G12970,AT1G11960,AT5G58090,AT5G51050,AT2G46610,AT4G08320,AT3G09570,AT1G78020,AT2G31650,AT1G77410,AT1G08270,AT1G53530,AT2G43000,AT4G16870,ATMG01350,AT5G62910,AT1G54830,AT3G29390,AT5G50240,AT4G38940,AT3G22370,AT1G49840,AT1G21460,AT5G60120,AT4G11830,AT4G31670,AT3G26890,AT4G34310,AT5G13070,AT3G26510,AT1G78150,AT5G04890,AT5G63370,AT5G57910,AT3G06420,AT5G24340,AT4G22340,AT1G72750,AT5G64200,AT1G22310,AT2G41820,AT1G22510,AT3G12700,AT1G23090,AT1G21410,AT5G57100,AT3G25120,AT1G63840,AT2G33740,AT3G14850,AT1G20920,AT5G42470,AT1G15440,AT3G47430,AT3G17030,AT4G28140,AT1G71170,AT1G66180,AT1G13195,AT4G01660,ATMG00110,AT4G14300,AT1G02110,AT5G25140,AT1G54160,AT2G42330,AT4G08590,AT1G14480,AT2G02230,AT1G13080,AT1G70590,AT1G30240,AT1G71340,AT4G21440,AT4G38060,AT3G15780,AT1G70180,AT1G21560,AT3G13310,ATMG01020,AT5G23050,AT5G46210,AT1G17590,AT5G47120,AT5G26760,AT4G37250,AT4G36450,AT3G25110,AT2G30320,AT3G45420,AT3G18050,AT5G48480,AT1G75390,AT1G75750,AT2G36485,AT3G09085,AT2G25620,AT1G73380,AT3G44610,AT1G29150,AT3G48070,AT2G01180,AT5G27460,AT5G17270,AT4G15880,AT5G58070,AT4G34560,AT3G06140,AT2G39570,AT3G10030,AT5G15510,AT3G60250,AT5G18400,AT1G73740,AT5G40770,AT1G10050,AT4G22360,AT1G02890,AT5G62090,AT3G19240,AT3G15770,AT5G53000,AT5G56500,ATMG00630,AT5G08535,AT1G67440,AT5G24710,AT2G36950,AT5G49910,AT5G54960,AT4G39520,AT4G32450,AT3G17350,AT1G29260,AT1G07510,AT3G05030,AT3G57530,AT3G04640,AT4G03320,AT5G03560,AT1G49790,AT5G11110,AT5G19900,AT1G12610,AT5G46410,AT5G39090,AT5G01350,AT4G14385,AT1G01830,AT5G11340,AT4G37730,AT2G40860,AT1G29820,AT5G12290,AT4G01120,AT3G46660,AT3G03950,AT5G40600,AT1G74450,AT4G25130,AT5G63830,AT1G72430,AT1G45130,AT5G57050,AT2G35900,AT4G27350,AT3G06400,AT3G26932,AT5G01600,AT1G07870,AT2G07705,AT4G10330,AT3G46200,AT3G23920,AT5G13150,AT5G14020,AT1G22190,AT1G55620,AT1G79550,AT3G28740,AT1G70060,AT1G80480,AT5G12900,AT3G02990,AT5G47920,AT5G19480,AT5G17760,AT5G15870,AT3G16330,AT1G53730,AT5G37380,AT4G25810,AT5G17400,AT3G03310,AT2G33700,AT5G11260,AT4G35290,AT5G41990,AT4G23885,AT5G50915,AT1G04770,AT3G09470,AT3G60360,AT3G14230,AT2G21320,AT2G17660,AT3G10640,AT3G01100,AT4G02990,AT5G48030,AT2G04795,AT4G13800,AT2G18680,AT3G27100,AT3G49810,AT4G24020,AT4G27680,AT4G22670,AT1G80670,AT1G05100,AT5G61790,AT5G62030,AT5G03030,AT2G20720,AT2G18780,AT3G49650,AT4G13550,AT4G03960,AT1G03860,AT1G62760,AT2G19580,AT1G68930,AT5G16260,AT1G33055,AT3G60720,AT3G51790,AT4G39235,AT5G48250,AT3G59280,AT5G66090,AT3G13860,AT3G09480,AT3G63310,AT5G58110,AT1G58150,AT5G38890,AT3G51520,AT1G16640,AT1G32120,AT3G03320,AT1G70090,AT1G75980,AT1G76190,AT1G68300,AT2G19570,AT5G48530,AT1G12650,AT1G68140,ATMG00670,AT1G07360,AT3G08960,AT5G02430,AT4G15690,AT3G04000,AT4G00760,AT5G51130,AT5G62730,AT5G65630,AT1G62570,AT3G57880,AT1G67370,AT2G43500,AT5G62520,AT5G13880,AT1G30480,AT2G34040,AT5G40850,AT3G09360,AT4G15700,AT5G05480,AT1G20220,AT5G51430,AT3G57810,AT4G20020,AT3G49160,AT5G58590,AT5G58787,AT1G75860,AT3G44110,AT2G40960,AT1G77460,AT4G27652,AT4G11740,AT1G27590,AT3G08690,AT1G49710,AT4G17970,AT5G17310,AT5G13700,AT3G12510,AT4G21090,AT5G15860,ATMG01370,AT3G04200,AT3G24495,AT2G21820,AT3G06660,AT5G04940,AT2G25470,AT4G26500,AT5G65490,AT1G13640,AT3G10800,ATMG01220,AT1G70300,AT3G24100,AT5G22060,AT5G03340,AT2G30480,AT1G16280,AT5G12040,AT1G60590,AT5G42220,AT3G04620,ATMG01000,AT2G04030,AT4G22740,AT2G26000,AT2G28000,AT2G02750,AT3G09440,AT1G20640,AT1G78610,AT1G49560,ATMG01210,AT1G05560,ATMG01360,AT4G34138,AT1G74240,AT1G77120,AT2G22240,AT3G59530,AT1G13690,AT2G21940,AT3G56090,AT5G56630,AT1G32870,AT3G63060,AT1G56300,AT5G11680,AT5G03740,AT5G62620,AT4G02430,AT4G27657,AT2G44170,AT3G56250,AT5G65900,AT4G01950,AT4G21310,AT5G64230,AT1G62950,AT5G39050,AT1G66400,AT4G14270,AT4G02980,AT3G03060,AT4G28390,AT2G25950,AT1G70790,AT2G33590,AT2G15790,AT1G78600,AT2G04530,AT3G14620,AT1G10970,AT3G17790,ATMG00660,AT2G24100,AT1G02700,AT1G22985,AT5G51740,AT2G18510,AT5G03720,AT1G15410,AT2G47180,AT1G02390,AT2G26140,AT1G77000,AT1G66550,AT5G63330,AT4G18450,AT5G24660,AT1G11660,AT2G18440,AT3G11020,AT5G52630,AT3G59430,AT5G56030,AT4G33660,AT5G25280,AT3G62260,AT4G03430,AT4G37370,AT5G23480,AT1G35660,AT1G59980,AT3G01650,AT2G42270,AT3G08590,ATMG01130,AT2G23110,AT5G42150,AT1G08560,AT1G07590,AT5G38895,AT1G07330,AT5G11090,AT1G23180,AT5G18040,AT3G01070,AT5G64950,AT5G04610,AT3G23170,AT2G21640,ATMG01200,AT5G58770,AT4G09150,AT1G62740,AT5G37260,AT5G01990,AT5G15450,AT5G15250,ATMG00640,AT1G04130,AT1G10170,AT4G25380,AT1G15550,AT5G53400,AT3G28210,ATMG00070,AT3G22840,ATMG00160,ATMG00650,AT2G17900,AT4G25340,AT2G33735,ATMG00060,AT3G23990,AT3G07770,AT5G53680,AT1G74320,AT4G26270,AT2G30000,AT1G66510,AT4G15680,AT1G16040,ATMG00690,AT3G25230,AT3G19270,AT2G41730,AT1G76880,AT4G17250,AT1G62730,AT5G01180,AT4G02550,AT5G09590,AT4G00940,AT4G26780,AT3G63350,AT5G47610,AT5G27660,AT5G07330,AT3G09640,AT5G59720,AT1G16030,AT4G10250,AT4G27670,AT1G52560 SUGIO_HEAT-SHOCK_DN Down-regulated by heat-shock (Dataset1 PubmedID:19244141) ATCG00490,AT2G26600,AT2G26530,AT2G26440,AT2G39795,AT2G39840,AT2G23200,AT2G23180,AT2G40940,AT2G41650,AT2G41540,AT2G47600,AT2G47490,AT2G33180,AT1G67660,AT5G12340,AT4G15440,AT4G14400,AT4G16430,AT4G14950,AT4G14360,AT4G15210,AT4G16780,AT4G15560,AT4G16490,AT4G14340,AT4G15010,AT4G13950,AT4G16146,AT4G16515,AT4G16000,AT4G17460,AT4G15000,AT4G16790,AT4G14010,AT4G17350,AT4G17470,AT4G17570,AT4G17080,AT4G16740,AT4G16880,AT4G16140,AT4G16210,AT4G15920,AT4G15260,AT4G14610,AT4G14540,AT4G14440,AT1G56700,AT1G56650,AT1G25230,AT1G25320,AT1G28280,AT5G04190,AT5G04160,AT1G73390,AT1G73500,AT1G44100,AT1G51100,AT1G66890,AT1G30210,AT1G26210,AT1G26110,AT5G13500,AT5G13490,AT5G28300,AT5G09450,AT5G09380,AT5G19750,AT5G28500,AT5G13090,AT5G13180,AT5G20660,AT5G20790,AT5G21070,AT5G21160,AT5G08350,AT5G20180,AT5G20885,AT5G19980,AT5G20050,AT5G20880,AT4G36810,AT4G36970,AT4G36480,AT4G36920,AT4G37210,AT4G36900,AT4G36830,AT4G36670,AT4G37260,AT4G37150,AT4G36540,AT4G37190,AT4G36660,AT3G56750,AT3G51890,AT1G16670,AT3G43610,AT1G51950,AT1G57620,AT1G57630,AT5G17490,AT5G17600,AT5G17630,AT5G17640,AT5G16760,AT5G16910,AT5G16940,AT5G15980,AT5G16000,AT5G16190,AT5G15410,AT5G15710,AT5G15440,AT5G14950,AT5G15010,AT5G14850,AT5G14930,AT5G36220,AT1G29710,AT5G33290,AT5G28150,AT5G28220,AT5G27930,AT5G27390,AT5G27520,AT5G27350,AT5G26770,AT5G26940,AT5G26720,AT5G25510,AT5G25810,AT5G25350,AT5G25360,AT5G25050,AT5G04820,AT5G24830,AT5G24890,AT5G67280,AT5G67390,AT5G67510,AT5G67080,AT5G67210,AT5G67070,AT5G67150,AT5G67180,AT5G66650,AT5G66560,AT5G66730,AT5G66950,AT5G65870,AT5G65830,AT5G65930,AT5G65890,AT5G65660,AT5G65640,AT5G65860,AT5G65280,AT5G65310,AT5G65360,AT5G65270,AT5G64830,AT5G65020,AT5G64813,AT5G64780,AT5G64570,AT5G64260,AT5G64410,AT5G63970,AT5G63980,AT5G63780,AT5G63450,AT5G63480,AT5G63410,AT5G62960,AT5G63010,AT5G63050,AT5G63080,AT5G62600,AT5G62680,AT5G62350,AT5G62070,AT5G62220,AT5G62360,AT5G61760,AT5G61770,AT5G61640,AT5G61780,AT5G61570,AT5G61590,AT5G60920,AT5G61010,AT5G61240,AT5G60840,AT5G60860,AT5G60890,AT5G60850,AT5G60900,AT5G60950,AT5G60570,AT5G59870,AT5G60230,AT5G59740,AT5G59760,AT5G59730,AT5G59500,AT5G59580,AT5G58940,AT5G59180,AT5G58900,AT5G58670,AT5G57630,AT5G57580,AT5G57710,AT5G57760,AT5G57780,AT5G57340,AT5G56980,AT5G57030,AT5G57150,AT5G56610,AT5G56860,AT5G56880,AT5G56270,AT5G56340,AT5G55630,AT5G55910,AT5G55500,AT5G55530,AT5G55560,AT5G55450,AT5G55550,AT5G55740,AT5G55120,AT5G55170,AT5G55260,AT5G54840,AT5G54850,AT5G54390,AT5G54470,AT5G54490,AT5G54610,AT5G54380,AT5G54170,AT5G54180,AT5G53570,AT5G53760,AT5G53140,AT5G53220,AT5G53290,AT5G53280,AT5G53420,AT5G53550,AT5G52870,AT5G53030,AT5G53060,AT5G52450,AT5G52420,AT5G52180,AT5G52320,AT5G52400,AT5G52510,AT5G52060,AT5G52070,AT5G52120,AT5G51390,AT5G51260,AT5G50840,AT5G50900,AT5G50380,AT5G50440,AT5G50450,AT5G50335,AT5G50280,AT5G50200,AT5G50330,AT5G50350,AT5G49980,AT5G49760,AT5G49280,AT5G49450,AT5G49570,AT5G49630,AT5G48880,AT5G49030,AT5G49060,AT5G48640,AT5G48730,AT5G48830,AT5G48150,AT5G47540,AT5G47730,AT5G47240,AT5G47220,AT5G47330,AT5G46580,AT5G46620,AT5G46760,AT5G46790,AT5G46830,AT5G46240,AT5G46230,AT5G46340,AT5G45670,AT5G45940,AT5G45900,AT5G45600,AT5G45280,AT5G45380,AT5G45000,AT5G44930,AT5G44650,AT5G44680,AT5G44730,AT5G44820,AT5G44190,AT5G44350,AT5G44370,AT5G44290,AT5G44390,AT5G44530,AT5G44250,AT5G44260,AT5G44050,AT5G44150,AT5G44210,AT5G43745,AT5G43710,AT5G43880,AT5G43670,AT5G43700,AT5G43790,AT5G43740,AT5G43140,AT5G42660,AT5G42860,AT5G42650,AT5G42420,AT5G42440,AT5G42090,AT5G42200,AT5G42320,AT5G41600,AT5G41890,AT5G41900,AT5G41410,AT5G41180,AT5G40970,AT5G41080,AT5G40780,AT5G40440,AT5G40540,AT5G39860,AT5G40170,AT5G40210,AT5G40380,AT5G40390,AT5G39670,AT5G39760,AT5G39990,AT5G39320,AT5G39360,AT5G39020,AT5G38380,AT5G38460,AT5G38710,AT5G38120,AT5G38130,AT5G38110,AT5G37480,AT5G36930,AT5G35750,AT5G35730,AT5G24420,AT5G24530,AT5G24290,AT5G23660,AT5G23850,AT5G23820,AT5G23390,AT5G22920,AT5G22760,AT5G22630,AT5G22880,AT5G19120,AT5G18940,AT5G18470,AT5G18500,AT5G18460,AT5G18640,AT5G18650,AT5G18060,AT5G17990,AT5G18070,AT5G16520,AT5G16450,AT5G16560,AT5G14700,AT5G15160,AT5G15240,AT5G15310,AT5G14410,AT5G14120,AT5G13680,AT5G13610,AT5G13400,AT5G12890,AT5G13330,AT5G13220,AT5G11980,AT5G11970,AT5G12190,AT5G12130,AT5G12050,AT5G11810,AT5G11790,AT5G12010,AT5G11410,AT5G11600,AT5G10750,AT5G11230,AT5G10760,AT5G10820,AT5G10830,AT5G09850,AT5G10300,AT5G09990,AT5G09630,AT5G09995,AT5G08160,AT5G07870,AT5G07840,AT5G08070,AT5G07440,AT5G07580,AT5G07620,AT5G07630,AT5G07730,AT5G07320,AT5G07460,AT5G06770,AT5G07010,AT5G07110,AT5G07100,AT5G06870,AT5G07070,AT5G06570,AT5G06680,AT5G06660,AT5G06530,AT5G06790,AT5G06100,AT5G06440,AT5G05730,AT5G05820,AT5G05870,AT5G05090,AT5G05160,AT5G04070,AT5G03700,AT5G03230,AT5G02940,AT5G02910,AT5G02290,AT5G02620,AT5G02630,AT5G02550,AT5G02540,AT5G02480,AT5G01960,AT5G02410,AT5G01780,AT5G01790,AT5G01830,AT5G01840,AT5G01850,AT5G01740,AT5G02010,AT5G01090,AT5G01075,AT5G01210,AT3G62930,AT3G62950,AT3G63010,AT3G63080,AT3G62620,AT3G62660,AT3G62800,AT3G61890,AT3G61960,AT3G61610,AT3G61580,AT3G61550,AT3G60620,AT3G61240,AT3G60530,AT3G60410,AT3G60630,AT3G60800,AT3G60290,AT3G60200,AT3G59670,AT3G59050,AT3G59080,AT3G58990,AT3G58790,AT3G58710,AT3G57710,AT3G57700,AT3G57220,AT3G57420,AT3G57460,AT3G57490,AT3G57790,AT3G57330,AT3G57020,AT3G56950,AT3G57040,AT3G57230,AT3G57240,AT3G56430,AT3G56360,AT3G56400,AT3G56260,AT3G56010,AT3G55720,AT3G55740,AT3G55640,AT3G55970,AT3G55920,AT3G55280,AT3G55130,AT3G55450,AT3G55360,AT3G55350,AT3G55110,AT3G54640,AT3G54140,AT3G54150,AT3G54220,AT3G54420,AT3G53730,AT3G53780,AT3G53700,AT3G53400,AT3G53600,AT3G53670,AT3G53370,AT3G53270,AT3G53260,AT3G52710,AT3G52760,AT3G52800,AT3G52740,AT3G52870,AT3G52070,AT3G52500,AT3G52480,AT3G52470,AT3G51440,AT3G51660,AT3G51670,AT3G51970,AT3G51090,AT3G50900,AT3G50770,AT3G50620,AT3G50440,AT3G50700,AT3G50750,AT3G50760,AT3G50740,AT3G50660,AT3G50070,AT3G50280,AT3G50340,AT3G50410,AT3G49940,AT3G49850,AT3G49880,AT3G49990,AT3G49220,AT3G49620,AT3G49670,AT3G49060,AT3G49350,AT3G48720,AT3G48570,AT3G48450,AT3G48350,AT3G48090,AT3G47960,AT3G47800,AT3G48080,AT3G47420,AT3G47340,AT3G47510,AT3G47620,AT3G47380,AT3G46820,AT3G46590,AT3G46180,AT3G46290,AT3G46110,AT3G45860,AT3G46030,AT3G45980,AT3G45600,AT3G45590,AT3G45140,AT3G45210,AT3G44450,AT3G44260,AT3G44380,AT3G43720,AT3G43270,AT3G43510,AT4G40050,AT4G39950,AT4G39980,AT4G39780,AT4G39740,AT4G39840,AT4G39940,AT4G39990,AT4G39390,AT4G39620,AT4G39030,AT4G39330,AT4G38580,AT4G38850,AT4G38840,AT4G38470,AT4G38520,AT4G38360,AT4G38160,AT4G38200,AT4G37790,AT4G37630,AT4G37710,AT4G37610,AT4G37770,AT4G37820,AT4G36150,AT4G36110,AT4G35550,AT4G35480,AT4G35570,AT4G35630,AT4G35320,AT4G35060,AT4G35110,AT4G35180,AT4G34950,AT4G34980,AT4G34990,AT4G34630,AT4G34540,AT4G34730,AT4G34650,AT4G34050,AT4G34250,AT4G33750,AT4G33700,AT4G33220,AT4G32800,AT4G33050,AT4G32280,AT4G32390,AT4G32290,AT4G31600,AT4G31770,AT4G31820,AT4G31850,AT4G31980,AT4G31540,AT4G31590,AT4G31500,AT4G30960,AT4G30340,AT4G30660,AT4G30825,AT4G30530,AT4G30360,AT4G30410,AT4G30560,AT4G30650,AT4G29810,AT4G29950,AT4G30060,AT4G29720,AT4G29740,AT4G29700,AT4G29130,AT4G29120,AT4G29210,AT4G29190,AT4G29050,AT4G28550,AT4G28720,AT4G28260,AT4G28240,AT4G28330,AT4G27860,AT4G27590,AT4G27720,AT4G27240,AT4G27230,AT4G26850,AT4G27040,AT4G27050,AT4G26940,AT4G26610,AT4G26570,AT4G26090,AT4G25780,AT4G25320,AT4G25260,AT4G24510,AT4G24660,AT4G24350,AT4G24210,AT4G24330,AT4G23880,AT4G23930,AT4G24010,AT4G24040,AT4G24060,AT4G23210,AT4G23290,AT4G23300,AT4G23130,AT4G22580,AT4G22620,AT4G22540,AT4G22150,AT4G22250,AT4G22320,AT4G22190,AT4G21850,AT4G21350,AT4G21400,AT4G21380,AT4G21060,AT4G21200,AT4G20780,AT4G19670,AT4G19140,AT4G19185,AT4G19160,AT4G19120,AT4G19450,AT4G19390,AT4G18710,AT4G18480,AT4G18520,AT4G18160,AT4G18170,AT4G18340,AT4G18390,AT4G13770,AT4G17870,AT4G13020,AT4G13410,AT4G12730,AT4G12230,AT4G12250,AT4G12470,AT4G12110,AT4G12030,AT4G11890,AT4G11800,AT4G11530,AT4G11175,AT4G11300,AT4G11120,AT4G11090,AT4G10620,AT4G10390,AT4G10060,AT4G10090,AT4G09890,AT4G09490,AT4G09500,AT4G09460,AT4G09510,AT4G09580,AT4G08850,AT4G08480,AT4G08170,AT4G08470,AT4G05450,AT4G04850,AT4G03510,AT4G03400,AT4G03390,AT4G03410,AT4G03150,AT4G03060,AT4G02820,AT4G02360,AT4G01870,AT4G01880,AT4G01840,AT4G02050,AT4G01700,AT4G01720,AT4G01080,AT4G01130,AT4G00955,AT4G00710,AT4G00880,AT4G00420,AT4G00370,AT1G31940,AT1G25500,AT1G25450,AT1G25400,AT1G25560,AT1G16790,AT1G18590,AT1G18620,AT1G18600,AT1G19670,AT2G33480,AT4G10170,AT4G10270,AT4G10280,AT2G40570,AT2G40475,AT2G30360,AT2G40460,AT1G67070,AT1G20300,AT1G17840,AT1G17830,AT1G66980,AT1G22050,AT1G22070,AT1G22335,AT1G22280,AT1G34010,AT1G34020,AT1G58270,AT1G07250,AT1G19170,AT1G07090,AT1G18150,AT1G20693,AT1G16850,AT1G16860,AT1G18210,AT1G13580,AT1G30135,AT1G51805,AT1G51800,AT1G51790,AT1G51620,AT1G51820,AT1G50940,AT3G12600,AT3G11320,AT3G12180,AT1G69530,AT1G69550,AT1G66760,AT1G66880,AT1G66740,AT1G66820,AT3G06150,AT3G11210,AT3G11090,AT1G75190,AT1G32540,AT1G31470,AT1G31550,AT1G66150,AT1G33260,AT3G14770,AT3G19553,AT3G19540,AT3G14860,AT3G28220,AT3G30180,AT3G29270,AT3G29290,AT3G28920,AT3G13620,AT3G52290,AT3G30380,AT2G34050,AT3G29400,AT3G29375,AT3G25690,AT3G13690,AT3G13720,AT3G13740,AT3G22150,AT3G22160,AT3G22210,AT3G20910,AT3G21390,AT3G26490,AT3G24670,AT3G24080,AT3G24050,AT3G19010,AT3G18910,AT3G21160,AT3G13480,AT3G28600,AT3G14090,AT3G28690,AT3G28180,AT3G19660,AT3G20570,AT3G20240,AT3G23810,AT3G13110,AT3G23690,AT3G14920,AT3G27880,AT3G16500,AT3G15095,AT3G17430,AT3G28130,AT3G29760,AT3G28040,AT3G28050,AT2G28890,AT2G40750,AT1G54850,AT2G12550,AT2G04230,AT1G75580,AT1G62840,AT1G80850,AT1G63850,AT1G29440,AT1G69040,AT3G09490,AT3G26210,AT3G26220,AT3G26230,AT3G25730,AT3G25780,AT3G12830,AT3G27420,AT3G18420,AT3G29230,AT3G27080,AT3G15940,AT3G26630,AT3G25180,AT3G12930,AT3G17120,AT3G17160,AT3G17170,AT3G28450,AT3G25410,AT3G25480,AT3G25580,AT3G25500,AT3G25540,AT3G23160,AT3G23240,AT3G19930,AT3G21750,AT3G25570,AT3G19850,AT3G27560,AT3G20870,AT3G19770,AT3G28930,AT3G19380,AT3G21230,AT3G21270,AT3G21220,AT3G28970,AT3G26030,AT3G26090,AT3G25890,AT3G26100,AT3G14560,AT3G23610,AT3G23550,AT3G24520,AT3G18160,AT3G18210,AT3G21650,AT3G21670,AT3G14050,AT3G14060,AT3G15630,AT3G29130,AT3G15610,AT3G15710,AT3G26750,AT3G23300,AT3G22740,AT3G14340,AT3G14240,AT3G14310,AT3G16700,AT3G15500,AT3G15470,AT3G15450,AT3G17390,AT3G16750,AT3G16740,AT3G16560,AT3G17250,AT3G06070,AT3G02570,AT3G02450,AT3G02460,AT3G02490,AT3G06590,AT3G06680,AT3G06750,AT3G04210,AT3G07040,AT3G06910,AT3G06020,AT3G02750,AT3G02790,AT3G02950,AT3G07930,AT3G07810,AT3G09920,AT3G09910,AT3G08670,AT3G08720,AT3G08630,AT3G08640,AT3G09580,AT3G09540,AT3G05880,AT3G05800,AT3G05910,AT3G05890,AT3G10760,AT3G10730,AT3G11840,AT3G04760,AT3G04580,AT3G07230,AT3G07080,AT3G03190,AT3G06300,AT3G03210,AT3G05640,AT3G10525,AT3G10610,AT3G10080,AT3G09940,AT3G08870,AT3G01960,AT3G07340,AT3G07320,AT3G07350,AT3G07390,AT3G07510,AT3G09210,AT3G07550,AT3G02290,AT3G04910,AT3G04790,AT3G02170,AT3G01360,AT3G02250,AT3G10260,AT3G01660,AT3G01480,AT3G09100,AT3G09050,AT3G09150,AT3G03560,AT3G11410,AT3G11420,AT3G01280,AT3G01170,AT3G11480,AT3G11490,AT3G11580,AT3G01080,AT3G16460,AT3G03830,AT3G05170,AT3G05220,AT1G13250,AT1G13460,AT1G13260,AT1G13280,AT3G16280,AT3G16470,AT1G13470,AT1G17750,AT1G02340,AT1G13910,AT1G13880,AT1G01490,AT1G13870,AT1G44000,AT1G12500,AT1G12450,AT1G21270,AT1G21250,AT1G21200,AT1G27930,AT1G52410,AT1G52280,AT1G52260,AT1G52400,AT1G69010,AT1G55370,AT1G55260,AT1G55265,AT1G55270,AT1G52340,AT1G52310,AT1G52290,AT1G77740,AT1G63130,AT1G77610,AT1G61000,AT1G64390,AT1G71100,AT1G71030,AT1G77630,AT1G64280,AT1G29500,AT1G29520,AT1G29510,AT1G29450,AT1G64380,AT1G49850,AT1G80630,AT1G52160,AT1G72180,AT1G72280,AT1G76640,AT1G76660,AT1G76790,AT1G76390,AT1G76380,AT1G76360,AT1G72610,AT1G71430,AT1G72700,AT1G76580,AT1G76560,AT1G76410,AT1G67970,AT1G29950,AT1G29980,AT1G68760,AT1G68840,AT1G78210,AT1G73830,AT1G73630,AT1G73790,AT1G78180,AT1G35430,AT1G36310,AT1G66350,AT1G71900,AT1G71880,AT1G52770,AT1G52800,AT1G52760,AT1G52880,AT1G71970,AT1G71980,AT1G70690,AT1G70750,AT1G67620,AT1G52890,AT1G70700,AT1G74380,AT1G74410,AT1G74430,AT1G80510,AT1G63680,AT1G63670,AT1G80290,AT1G70520,AT1G80400,AT1G69170,AT1G69380,AT1G69330,AT1G69260,AT1G69370,AT1G69360,AT1G69690,AT1G74100,AT1G74055,AT1G69910,AT1G69890,AT1G69610,AT1G72470,AT1G72450,AT1G11050,AT1G51610,AT1G51500,AT1G51570,AT1G51590,AT2G47260,AT2G43530,AT2G43520,AT2G43550,AT2G43535,AT2G43510,AT2G43760,AT1G55910,AT1G53390,AT1G53230,AT1G62430,AT1G53300,AT1G32460,AT1G32360,AT1G19320,AT1G19380,AT1G19360,AT1G19310,AT1G19480,AT1G17620,AT1G48050,AT1G17500,AT1G15020,AT1G06160,AT1G78240,AT1G06760,AT1G21920,AT1G21590,AT1G06000,AT1G12220,AT1G12240,AT1G12120,AT1G01240,AT1G17380,AT1G17420,AT1G17490,AT1G01420,AT1G01430,AT1G01260,AT1G01300,AT1G07280,AT1G07570,AT1G75450,AT1G75420,AT1G75460,AT1G75410,AT1G19800,AT1G19710,AT1G19680,AT1G34470,AT1G12820,AT1G12860,AT1G12850,AT1G12830,AT1G20190,AT1G20050,AT1G05805,AT1G26770,AT1G26650,AT1G44750,AT1G44760,AT1G44810,AT1G53110,AT1G53050,AT1G18850,AT1G79680,AT1G07790,AT1G07630,AT1G18710,AT1G21120,AT1G21050,AT1G28340,AT1G14345,AT1G14370,AT1G63500,AT1G01030,AT1G01040,AT1G49780,AT1G49580,AT1G49650,AT1G49730,AT1G01970,AT1G49975,AT1G27690,AT1G32610,AT1G32690,AT1G32700,AT1G32640,AT1G18400,AT1G76270,AT1G76090,AT1G47740,AT1G08350,AT1G08250,AT1G15580,AT1G08230,AT1G16060,AT1G30550,AT1G08280,AT1G08180,AT1G11580,AT1G50440,AT1G50570,AT1G11440,AT1G80900,AT1G65860,AT1G65870,AT1G22540,AT1G22500,AT1G22590,AT1G64620,AT1G64660,AT1G35560,AT1G80130,AT1G59640,AT1G59650,AT1G59620,AT1G77850,AT1G77920,AT1G52630,AT1G52720,AT1G74950,AT1G74850,AT1G74800,AT1G74720,AT1G74890,AT1G74680,AT1G53885,AT1G68600,AT1G48330,AT1G48320,AT1G48230,AT1G53920,AT1G68720,AT1G27630,AT1G70820,AT1G64060,AT1G72830,AT1G72920,AT1G49520,AT1G49510,AT1G49450,AT1G11210,AT1G11280,AT1G21830,AT1G21670,AT1G34200,AT1G31300,AT1G15100,AT1G15220,AT1G15260,AT1G13960,AT1G06620,AT1G06510,AT1G06470,AT1G62820,AT1G14020,AT1G14130,AT1G62830,AT1G75900,AT1G75990,AT1G62790,AT1G75960,AT1G75800,AT1G75820,AT1G75840,AT1G28600,AT1G28540,AT1G16370,AT1G10720,AT1G12990,AT1G13180,AT1G13210,AT1G13000,AT1G13020,AT1G10690,AT1G20980,AT1G11720,AT1G11670,AT1G14920,AT1G64890,AT1G64900,AT1G14780,AT1G14790,AT1G59870,AT1G59710,AT1G59700,AT1G75500,AT1G75540,AT1G75490,AT1G23390,AT1G54200,AT1G24070,AT1G23850,AT2G18160,AT2G18170,AT2G17540,AT2G05320,AT1G03080,AT1G03090,AT1G78550,AT1G78660,AT1G54090,AT1G54120,AT1G54030,AT1G54130,AT1G54080,AT1G54020,AT1G05520,AT1G36050,AT1G30610,AT1G10470,AT2G16500,AT2G31400,AT2G31360,AT1G10560,AT2G11520,AT2G15320,AT2G22080,AT2G40230,AT2G40150,AT2G31680,AT2G28720,AT2G22310,AT2G22250,AT2G28650,AT2G28605,AT2G22190,AT2G31940,AT2G31955,AT2G03980,AT2G29900,AT2G22200,AT2G42620,AT2G24850,AT2G27150,AT2G01910,AT2G01860,AT2G01890,AT2G01850,AT2G01830,AT2G16280,AT2G25250,AT2G04650,AT1G04240,AT1G26920,AT1G31220,AT1G31120,AT2G20610,AT2G20570,AT2G13650,AT1G59970,AT1G60010,AT2G06255,AT2G46450,AT2G46370,AT2G46420,AT2G24600,AT2G40270,AT2G04400,AT2G40435,AT2G36880,AT2G36870,AT2G37040,AT2G36320,AT2G36380,AT2G36400,AT2G36590,AT2G36470,AT2G36310,AT2G35800,AT2G35960,AT2G36050,AT2G42760,AT2G42870,AT2G42880,AT2G22430,AT2G03750,AT2G22330,AT2G28550,AT2G28520,AT2G31230,AT1G79110,AT1G79080,AT1G79030,AT1G65295,AT1G02260,AT1G65380,AT1G22650,AT1G22640,AT3G16030,AT1G67480,AT1G54820,AT1G09200,AT1G09250,AT1G60270,AT1G78890,AT1G70420,AT1G04110,AT1G04180,AT1G70290,AT1G03290,AT1G12090,AT2G25190,AT1G12020,AT1G61730,AT1G77280,AT1G77140,AT1G10130,AT1G30820,AT1G05150,AT1G05200,AT2G17670,AT2G17720,AT1G04530,AT2G17760,AT1G08920,AT1G09970,AT1G09630,AT1G09900,AT1G70000,AT1G70230,AT1G70200,AT1G70100,AT1G70190,AT1G69960,AT1G70130,AT1G22970,AT1G62050,AT1G62300,AT1G61370,AT1G61360,AT1G61380,AT1G61350,AT2G17880,AT2G17820,AT1G03420,AT1G03730,AT1G03430,AT1G03520,AT2G17350,AT2G17290,AT2G17450,AT1G24150,AT1G24100,AT1G61170,AT1G61120,AT1G23220,AT1G60660,AT1G60600,AT1G27190,AT1G27200,AT1G27210,AT1G67330,AT1G61560,AT1G24625,AT1G52000,AT1G30900,AT1G05010,AT2G36670,AT2G36720,AT2G43060,AT2G14080,AT2G20340,AT2G22670,AT2G18300,AT2G16700,AT2G16710,AT2G16720,AT2G20670,AT2G20810,AT2G11000,AT2G16630,AT2G20680,AT2G46620,AT2G46510,AT2G46530,AT2G46550,AT2G15760,AT2G15970,AT2G15960,AT2G15830,AT2G20010,AT2G25520,AT2G27230,AT2G25490,AT2G24360,AT2G03340,AT2G32100,AT2G01150,AT2G01290,AT2G13100,AT2G14460,AT2G42360,AT2G42390,AT2G01720,AT2G01650,AT2G01680,AT2G42320,AT2G25720,AT2G15080,AT2G37450,AT2G24210,AT2G24220,AT2G24160,AT2G18790,AT2G40670,AT2G38010,AT2G38050,AT2G45150,AT2G02080,AT2G02100,AT2G45160,AT2G28080,AT2G38860,AT2G28900,AT2G28740,AT2G28840,AT2G27660,AT2G27820,AT2G27050,AT2G27130,AT2G46690,AT2G46700,AT2G46650,AT2G32380,AT2G32400,AT2G32290,AT2G32450,AT2G41350,AT2G41310,AT2G38790,AT2G38750,AT2G38760,AT2G38650,AT2G43250,AT2G43190,AT2G22760,AT2G22770,AT2G31070,AT2G23840,AT2G25735,AT2G25830,AT2G19780,AT2G19810,AT2G03240,AT2G02970,AT2G02870,AT2G46920,AT2G46870,AT2G22840,AT2G22880,AT2G22870,AT2G22900,AT2G28930,AT2G44850,AT2G44910,AT2G44940,AT2G44840,AT2G22800,AT2G22890,AT2G26110,AT2G44730,AT2G44740,AT2G44670,AT2G44810,AT2G45810,AT2G34600,AT2G34570,AT2G45850,AT2G18950,AT2G18940,AT2G39420,AT2G39330,AT2G39200,AT2G39210,AT2G34490,AT2G39250,AT2G39170,AT2G38400,AT2G34200,AT2G32510,AT2G40980,AT2G41090,AT2G41180,AT2G38120,AT2G14750,AT2G23430,AT2G30860,AT2G37640,AT2G37680,AT2G37710,AT2G44020,AT2G44180,AT2G30830,AT2G30120,AT2G23150,AT2G23770,AT2G23740,AT2G23670,AT2G23760,AT2G39980,AT2G39870,AT2G44230,AT2G39970,AT2G44420,AT2G26280,AT2G26330,AT2G44490,AT2G34930,AT2G34940,AT2G34810,AT2G30590,AT2G30620,AT2G45600,AT2G30460,AT2G30600,AT2G41890,AT2G42070,AT2G41900,AT2G32680,AT2G39700,AT2G39705,AT2G39710,AT2G26730,AT2G39660 BETHKE_35S-ERF104_UP Upregulated in 35S::ERF104 (534 in total) (Table S A PubmedID:19416906) AT2G26020,AT5G44420,AT5G61600,AT5G57220,AT5G61160,AT3G23550,AT1G18570,AT2G26560,AT3G49620,AT4G21680,AT1G21120,AT1G21100,AT1G15100,AT1G08090,AT4G27300,AT1G14870,AT1G19960,AT4G22620,AT3G14680,AT1G80820,AT1G75040,AT1G61340,AT1G72920,AT1G64710,AT5G26220,AT1G14880,AT2G27690,AT4G04830,AT1G10770,AT1G30530,AT3G63200,AT1G19020,AT3G04210,AT5G36910,AT3G01290,AT4G34950,AT1G27920,AT1G19670,AT2G31230,AT3G62150,AT5G56030,AT5G09650,AT1G74100,AT5G18660,AT5G22300,AT4G24570,AT3G04550,AT2G45470,AT1G22400,AT4G04840,AT1G29340,AT5G56010,AT1G65190,AT2G38860,AT3G02910,AT3G05730,AT4G31500,AT4G13410,AT4G10040,AT3G22210,AT4G23180,AT1G22070,AT2G16660,AT4G38550,AT1G79200,AT1G73602,AT2G02410,AT1G72910,AT3G46010,AT3G01830,AT1G62780,AT2G23670,AT3G44720,AT5G03380,AT1G24100,AT5G10330,AT1G75810,AT2G27510,AT3G48420,AT1G11330,AT2G21210,AT5G59970,AT5G54960,AT4G39980,AT3G14200,AT2G04400,AT3G05800,AT1G57630,AT5G42250,AT1G56190,AT4G12830,AT5G03050,AT5G66530,AT3G62690,AT4G21870,AT1G51060,AT1G76405,AT4G12290,AT1G51110,AT5G51820,AT1G07350,AT5G54810,AT3G13470,AT3G15750,AT1G52030,AT1G14230,AT2G44650,AT5G56670,AT4G19880,AT5G15230,AT1G70230,AT4G02380,AT1G31180,AT3G04790,AT1G75750,AT5G52060,AT2G46670,AT4G22710,AT1G35350,AT1G16650,AT4G24350,AT1G72900,AT5G02270,AT1G21250,AT4G27030,AT1G78080,AT5G66550,AT1G51660,AT1G07000,AT4G16860,AT1G29720,AT5G65480,AT1G66080,AT5G40780,AT1G76520,AT5G67390,AT1G22160,AT5G59540,AT2G41100,AT1G28600,AT3G61220,AT4G31985,AT1G28660,AT4G21410,AT1G13650,AT5G03630,AT3G15210,ATCG00140,AT5G45010,AT1G13110,AT5G05410,AT1G22520,AT4G26530,AT5G49910,AT4G33110,AT1G51805,AT1G71140,AT2G39220,AT3G62030,AT1G21130,AT1G20070,AT5G42020,AT3G15950,AT5G62150,AT1G61190,AT2G21860,AT1G08250,AT3G28290,AT3G63160,AT1G03220,AT4G33470,AT2G27360,AT5G01820,AT3G53740,AT1G55490,AT2G42190,AT3G24503,AT4G00370,AT4G39940,AT5G02940,AT4G16146,AT5G50200,AT2G47000,AT4G38540,AT5G17450,AT2G14880,AT3G16460,AT4G09420,AT4G02130,AT5G19250,AT5G11030,AT3G16080,AT5G63310,AT4G20260,AT3G44890,AT4G39260,AT5G67280,AT1G57990,AT3G07090,AT5G44070,AT2G33450,AT5G15740,AT3G13380,AT2G19130,AT5G54930,AT5G61020,AT4G10120,AT4G23010,AT4G25480,AT5G64510,AT4G32020,AT3G18280,AT1G77060,AT2G38270,AT2G38470,AT1G72050,AT4G23270,AT2G47840,AT2G38140,AT1G60830,AT4G23570,AT4G34930,AT2G37940,AT4G29520,AT1G76240,AT5G02500,AT3G21690,AT5G58120,AT5G66470,AT3G18830,AT5G63790,AT3G57020,AT2G23600,AT1G65230,AT2G30870,AT5G64480,AT4G33530,AT4G34740,AT3G26060,AT2G16700,AT1G04420,AT1G51090,AT1G76450,AT4G17090,AT1G15270,AT1G76990,AT3G23410,AT5G62980,AT3G28930,AT3G06700,AT2G03420,AT3G50790,AT2G31360,AT5G44650,AT1G13730,AT1G78600,AT2G36835,AT3G26450,AT5G10470,AT5G59730,AT5G56710,AT3G60690,AT1G29660,AT4G25900,AT4G16370,AT3G56240,AT2G42600,AT5G05370,AT1G50450,AT5G59820,AT2G30990,AT2G43510,AT1G07050,AT1G19130,AT3G09970,AT5G25930,AT5G01500,AT1G33600,AT1G53035,AT5G59870,AT3G17609,AT1G62710,AT1G01140,AT5G36220,AT1G74090,AT4G39710,AT1G53240,AT5G53420,AT1G09690,AT1G64750,AT1G56290,AT3G28900,AT5G47910,AT1G36390,AT5G36790,AT3G27820,AT1G71880,AT1G15120,AT4G18480,AT3G10060,AT4G13840,AT1G15140,AT5G13100,AT3G55630,AT2G18690,AT5G23240,AT5G17870,AT3G49120,AT1G64190,AT5G01410,AT4G12320,AT3G22370,AT1G03850,AT4G35060,ATCG00900,AT1G70370,AT1G23090,AT2G18740,AT3G48425,AT4G12730,AT3G23940,AT5G20150,AT3G60245,AT1G79850,AT1G66880,AT1G61360,AT2G35500,AT3G53560,AT2G28000,AT1G55480,AT4G17190,AT2G20450,AT5G64170,AT1G49230,AT1G32080,AT4G16840,AT3G46930,AT4G26850,AT4G17600,AT3G59540,AT4G21990,AT3G46620,AT5G48880,AT1G17050,AT1G07250,AT2G40840,AT1G66820,AT5G18150,AT1G14810,AT1G48100,AT3G26310,AT1G69750,AT5G22340,AT5G50460,AT4G03410,AT3G61190,AT3G08740,AT3G22230,AT1G53870,AT2G44310,AT1G75350,AT5G17990,AT5G22060,AT3G52380,AT1G47260,AT5G04310,AT2G40270,AT5G13110,AT4G39780,AT3G63140,AT3G29030,AT1G47500,AT1G74730,AT4G15660,AT5G18500,AT4G10480,AT3G53890,AT5G20290,AT5G02870,AT3G01390,AT3G13620,AT1G03630,AT2G39390,AT4G39150,AT5G13710,AT1G22530,AT1G04250,AT3G21070,AT4G34200,AT1G53430,AT2G39030,AT3G07470,AT1G43560,AT1G77490,AT3G51820,AT3G62410,AT1G01100,AT1G58080,AT5G01015,AT2G46420,AT5G51040,AT5G12010,AT5G13200,AT2G16430,AT3G16560,AT4G38740,AT3G53870,AT1G75250,AT2G39710,AT2G21320,AT2G45990,AT4G15800,AT3G49080,AT1G80560,AT2G36620,AT1G13270,AT5G08040,AT1G14980,AT5G52970,AT4G38710,AT4G29060,AT1G74720,AT4G04330,AT3G53430,AT3G49890,AT4G12470,AT3G29760,AT3G10970,AT5G06110,AT4G16890,AT1G07790,AT2G05940,AT1G14345,AT5G51720,AT4G09720,AT2G44670,AT1G52510,AT5G28750,AT5G43750,AT3G05520,AT2G23340,AT5G52450,AT5G36880,AT2G46340,AT5G02450,AT5G38510,AT1G48598,AT1G02280,AT2G43590,AT2G35960,AT5G54600,AT1G22840,AT1G08930,AT3G29375,AT3G60620,AT1G25155,AT1G08650,AT5G14910,AT1G15500,AT3G46970,AT1G56300,AT2G38310,AT1G76080,AT4G17770,AT5G49480,AT5G46580,AT2G14750,AT3G50550,AT5G44290,AT1G78630,AT1G27730,AT3G12740,AT5G20700,AT3G51870,AT3G08730,AT3G56910,AT5G37780,AT4G17390,AT5G14930,AT5G48300,AT4G09010,AT3G52150,AT1G52300,AT1G68600,AT5G20720,AT4G13770,AT4G15440,AT1G23290,AT1G09815,AT4G36010,AT4G01310,AT4G00880,AT4G35480,AT5G49760,AT3G04760,AT2G44490,AT2G27680,AT5G42150,AT1G67800,AT5G60540,AT4G02530,AT5G52510,AT5G47770,AT4G23290,AT1G22570,AT4G22930,AT4G01070,AT2G24050,AT5G38990,AT3G21300,AT1G18540,AT4G36500,AT5G12860,AT1G32640,AT3G24550,AT4G28360,AT4G39200,AT1G05170,AT2G34860,AT2G19830,AT2G39920,AT4G26370,AT3G12930,AT2G47880,AT1G76790,AT2G21140,AT3G14690,AT1G56340,AT5G53540,AT4G11600,AT1G03230,AT1G09590,AT1G14250,AT1G28670,AT1G34570,AT1G47490,AT1G48600,AT1G52040,AT1G52370,AT1G53890,AT1G57980,AT1G60900,AT1G61180,AT1G65250,AT1G66590,AT1G71920,AT1G72930,AT1G73600,AT1G80300,AT2G23590,AT2G31610,AT2G46790,AT3G28300,AT3G49110,AT4G12280,AT4G12310,AT4G22690,AT4G27070,AT4G33120,AT4G34920,AT5G14200,AT5G28540,AT5G36700,AT5G39000,AT5G56000,AT5G57890,AT5G59690,ATCG01240,AT1G25083,AT1G61300,AT1G24807,AT1G25220,AT1G24909,AT1G61310 BETHKE_35S-ERF104_DN Downregulated in 35S::ERF104 (17 genes) (Table S B PubmedID:19416906) AT4G38410,AT4G18670,AT1G18400,AT4G37770,AT3G22600,ATMG01180,ATMG01200,AT1G73830,AT5G25190,AT3G02210,AT4G01290,AT1G68130,AT5G66080,AT1G78700,AT3G20810,AT3G05430,AT1G67910 BETHKE_35S-ERF104-35S-ERF1_UP Upregulated genes in 35S::ERF104 (atH1 25K chip) & 35S::ERF1 (8K chip, Lorenzo et al. 2002) (Table S C PubmedID:19416906) AT1G18570,AT4G21680,AT4G27300,AT1G75040,AT5G22300,AT2G38860,AT2G04400,AT4G24350,AT3G16460,AT4G25900,AT5G25930,AT5G47910,AT1G61360,AT2G18690,AT4G34200,AT2G43590,AT5G44290,AT1G17745,AT1G59960,AT2G41180,AT4G16660,AT5G44420 BETHKE_ET-35S-ERF104_UP Upregulated by ET and 35S::ERF104 (Table S D PubmedID:19416906) AT5G61160,AT4G12470,AT4G02380,AT3G49620,AT3G23550,AT1G21100,AT5G36220,AT5G57220,AT2G26560,AT1G61340,AT2G43590,AT2G18690,AT1G66880,AT4G16146,AT1G19020,AT1G66080,AT2G38860,AT5G59540,AT4G15660,AT4G21990,AT1G27730,AT5G54960,AT5G63790,AT3G63200,AT1G51660 BETHKE_MEJA-35S-ERF104_UP Upregulated by MeJA and in 35S::ERF104 (Table S E PubmedID:19416906) AT2G39030,AT1G19670,AT4G13410,AT4G21680,AT4G15440,AT2G27690,AT3G23550,AT4G24350,AT3G49620,AT5G36220,AT1G32640,AT5G02940,AT1G76790,AT1G27730,AT5G26220,AT4G04840,AT4G36500,AT1G21100,AT4G39980,AT2G04400,AT2G14750,AT4G31500,AT4G39940 BETHKE_MEJA-35S-ERF104_DN Downregulated by MeJA and in 35S::ERF104 (Table S E PubmedID:19416906) AT1G67910,AT1G73830 BETHKE_ERF104OE-PLANT_UP Upregulated -selected genes in ERF104OE plants (Table 1 PubmedID:19416906) AT2G26020,AT5G44420,AT1G75040,AT5G36910,AT1G19670,AT3G05730,AT2G43590,AT4G36010,AT2G44490,AT1G18570,AT1G72920,AT3G04210,AT2G31230,AT1G22070,AT1G51660,AT3G15210,AT5G67280,AT2G38470,AT5G47910,AT5G52510,AT1G32640 MIYAZAKI_KINASE_GERMINATED-POLLEN_NOT-SEEDING_DIFF Receptor-like Kinases Expressed in Germinated Pollen but Not in Seedlings of Arabidopsis thaliana (Table S 1 PubmedID:19646876) AT1G16760,AT1G17540,AT1G19090,AT1G23540,AT1G49270,AT1G50610,AT1G61860,AT1G72760,AT1G74490,AT1G76370,AT1G78940,AT1G78980,AT2G07020,AT2G07040,AT2G17090,AT2G18470,AT2G21480,AT2G24370,AT2G41970,AT2G43230,AT3G02810,AT3G04690,AT3G07070,AT3G13065,AT3G20190,AT3G20200,AT3G20530,AT3G24790,AT3G42880,AT4G13190,AT4G28670,AT4G29450,AT4G31220,AT4G34440,AT4G39110,AT5G10520,AT5G12000,AT5G16500,AT5G20690,AT5G26150,AT5G28680,AT5G35380,AT5G35390 MOROHASHI_META-ANALYSIS_GL1DM_4H_UP Up-regulated genes from meta-analysis (q<0.05) by GL1DM 4hrs (Table S 2 PubmedID:19247443) AT4G15210,AT3G57260,AT2G44130,AT4G39210,AT3G13310,AT1G52890,AT2G04350,AT2G18230,AT5G58770,AT5G24770,AT1G67360,AT1G56650,AT5G39610,AT4G34000,AT2G37770,AT2G39350,AT4G36040,AT5G42800,AT3G26070,AT3G16110,AT5G61570,AT2G16990,AT4G09020,AT5G66200,AT5G09230,AT5G24970,AT3G52740,AT1G70790,AT5G64280,AT5G52810,AT1G68600,AT5G53120,AT1G16610,AT1G78610,AT3G10940,AT3G06440,AT3G06410,AT3G02790,AT5G19850,AT5G43150,AT1G77920,AT1G11410,AT5G03200,AT2G37240,AT4G22530,AT1G59700,AT3G60810,AT2G24420,AT5G18310,AT5G63520,AT3G14720,AT1G62560,AT5G23690,AT1G53160,AT1G32900,AT1G17140,AT5G20540,AT3G24190,AT5G14780,AT3G60860,AT1G64400,AT2G42600,AT5G59130,AT5G12980,AT1G50290,AT4G27560,AT3G04340,AT1G61800,AT2G17120,AT1G66130,AT3G57630,AT4G26700,AT3G50790,AT2G37300,AT3G50550,AT5G38530,AT4G17550,AT1G35720,AT3G15140,AT4G37000,AT1G16340,AT1G06430,AT4G36750,AT4G02340,AT5G08370,AT3G13845,AT1G78050,AT5G28030,AT4G39950,AT4G33950,AT3G12520,AT5G38520,AT4G28740,AT2G21280,AT1G79750,AT3G18000,AT1G19690,AT1G51160,AT4G36780,AT1G09420,AT3G52180,AT4G39730,AT1G15810,AT3G07730,AT5G48880,AT4G39800,AT1G04350,AT5G12350,AT5G19500,AT3G13000,AT2G05830,AT1G34380,AT2G28900,AT2G18600,AT4G00630,AT1G54490,AT2G21970,AT5G46420,AT5G59480,AT2G24270,AT5G13520,AT1G17990,AT5G58350,AT4G04350,AT1G43620,AT3G26030,AT2G44060,AT4G08870,AT3G26640,AT2G39580,AT2G32290,AT5G58120,AT1G30530,AT1G63840,AT3G15880,AT2G28470,AT4G02060,AT1G19650,AT1G70890,AT5G04140,AT1G62730,AT5G14660,AT5G20680,AT4G29490,AT1G71480,AT4G10060,AT5G02030,AT5G37360,AT2G35840,AT1G78580,AT1G79600,AT1G54050,AT5G06060,AT1G31500,AT3G22060,AT1G75900,AT4G32770,AT4G03140,AT3G02690,AT4G09510,AT1G04080,AT3G22120,AT4G00090,AT1G11090,AT3G55120,AT4G38360,AT4G14400,AT4G23620,AT3G56240,AT1G03550,AT5G45940,AT1G67950,AT1G25390,AT4G35450,AT4G02570,AT5G12860,AT4G19400,AT3G54350,AT4G18270,AT2G25250,AT4G25640,AT5G09670,AT3G52390,AT2G25510,AT1G49500,AT5G06860,AT4G38620,AT2G43680,AT3G05090,AT3G15760,AT5G38630,AT3G13810,AT4G08850,AT1G45474,AT1G50250,AT4G08280,AT5G02130,AT1G52260,AT2G38370,AT3G60480,AT1G09230,AT5G45170,AT2G38760,AT5G23010,AT4G08690,AT1G23740,AT2G46470,AT2G32720,AT1G67500,AT1G31550,AT5G16910,AT4G20130,AT2G01090,AT1G18540,AT2G41890,AT2G15310,AT1G74030,AT5G13770,AT1G11840,AT1G32700,AT1G58807,AT5G43750,AT3G19480,AT2G40780,AT5G64260,AT1G75730,AT2G17280,AT3G29090,AT4G39940,AT4G35090,AT5G41360,AT5G42310,AT3G59300,AT3G55740,AT1G22710,AT2G43520,AT3G18830,AT3G46960,AT4G11000,AT5G54630,AT4G17090,AT3G44620,AT3G63410,AT5G06340,AT3G46530,AT5G67030,AT5G22510,AT1G27540,AT4G19670,AT1G50450,AT5G25100,AT3G03310,AT4G16440,AT1G23830,AT5G66950,AT5G51140,AT4G13505,AT1G68070,AT3G22750,AT5G03940,AT5G50030,AT3G60245,AT4G32300,AT4G08580,AT3G51910,AT5G49945,AT3G14650,AT1G02100,AT1G32500,AT4G18040,AT2G32040,AT2G44420,AT1G67120,AT5G11270,AT3G50480,AT2G47270,AT2G28930,AT3G43740,AT1G66100,AT4G03050,AT2G34680,AT4G11260,AT4G33660,AT1G18020,AT1G27580,AT1G59124,AT2G44140,AT3G26080,AT4G01170,AT4G08900,AT4G13510,AT4G27570,AT5G06865,AT5G17900,AT5G24780,AT5G41370 MOROHASHI_META-ANALYSIS_GL1DM_4H_DN Down-regulated genes from meta-analysis (q<0.05) by GL1DM 4hrs (Table S 2 PubmedID:19247443) AT1G71720,AT3G29810,AT4G16860,AT4G23810,AT1G65440,AT2G33040,AT1G24100,AT4G13800,AT5G24380,AT2G38040,AT5G14450,AT3G04650,AT3G26710,AT3G05490,AT3G08530,AT5G59900,AT2G18380,AT3G18040,AT2G19480,AT1G04270,AT3G27530,AT3G16120,AT5G13570,AT1G27460,AT3G48710,AT5G49410,AT3G51260,AT1G22640,AT5G35750,AT5G26830,AT1G64770,AT5G56910,AT5G37990,AT2G31840,AT2G34640,AT4G27240,AT3G57180,AT3G04630,AT5G67290,AT3G30300,AT4G09900,AT2G41410,AT5G67150,AT5G27450,AT2G44120,AT5G01010,AT5G38690,AT1G26560,AT4G38540,AT2G41680,AT1G66180,AT5G28630,AT3G47070,AT5G17710,AT1G03560,AT3G12110,AT1G03160,AT3G13460,AT3G07390,AT1G70100,AT3G12685,AT4G30620,AT4G14510,AT5G51700,AT5G11000,AT3G29185,AT3G13235,AT2G32240,AT4G18750,AT3G11400,AT4G29390,AT3G21300,AT5G01015,AT3G07300,AT5G11410,AT5G52030,AT5G40660,AT3G54090,AT4G25080,AT5G16180,AT1G47840,AT5G67130,AT2G28605,AT5G46350,AT4G01400,AT2G37190,AT2G35155,AT1G65220,AT4G10480,AT5G42240,AT1G59720,AT3G51890,AT5G22270,AT3G23070,AT4G35910,AT5G01210,AT4G32190,AT5G25440,AT5G35790,AT4G04840,AT5G61660,AT5G10360,AT3G20440,AT2G38270,AT5G06160,AT1G12270,AT1G09680,AT2G19570,AT5G53080,AT3G09050,AT3G27960,AT1G28400,AT1G15340,AT3G22970,AT5G03900,AT5G44130,AT1G62422,AT1G47740,AT1G08750,AT4G39960,AT3G20770,AT2G38860,AT3G12930,AT1G57680,AT3G15770,AT4G33670,AT3G18524,AT5G40600,AT1G03300,AT3G22104,AT3G60370,AT5G44340,AT5G19770,AT5G53500,AT2G43650,AT2G31530,AT1G64680,AT1G18390,AT2G20240,AT4G24670,AT1G35280,AT5G39980,AT3G24050,AT1G75750,AT3G10690,AT1G32920,AT5G20290,AT1G75760,AT2G45520,AT4G02990,AT1G74380,AT1G06790,AT5G50740,AT1G72180,AT2G37750,AT4G14680,AT2G32450,AT5G48340,AT3G18035,AT5G27670,AT4G33520,AT1G14720,AT3G16150,AT1G61260,AT5G40450,AT3G62660,AT4G35180,AT4G22720,AT1G67920,AT4G30270,AT3G18190,AT1G20090,AT1G66150,AT3G16780,AT1G14870,AT5G67570,AT4G17615,AT4G24175,AT1G13670,AT5G53250,AT1G21830,AT1G49380,AT3G49240,AT5G57250,AT1G12020,AT2G34510,AT1G72790,AT1G02400,AT3G26980,AT5G12440,AT1G43170,AT2G33330,AT5G15350,AT3G46210,AT3G57000,AT5G51550,AT4G03210,AT4G28780,AT1G72150,AT1G08610,AT2G17230,AT1G73100,AT5G50760,AT4G19420,AT5G40890,AT1G28190,AT4G20780,AT5G14120,AT3G62150,AT5G03040,AT2G21640,AT3G19680,AT5G62920,AT2G30930,AT3G05850,AT1G09390,AT5G54380,AT1G18570,AT3G48640,AT1G14685,AT1G01560,AT5G44680,AT1G09250,AT1G68190,AT5G44020,AT2G20050,AT1G78410,AT1G21140,AT1G17960,AT4G21850,AT1G14880,AT1G47860,AT2G11060,AT3G11130,AT5G01215,AT5G19780,AT2G12210 MOROHASHI_META-ANALYSIS_GL1DM_24H_UP Up-regulated genes from meta-analysis (q<0.05) by GL1DM 24hrs (Table S 2 PubmedID:19247443) AT2G44130,AT3G13310,AT3G22060,AT2G15310,AT1G75900,AT5G58770,AT4G38620,AT5G12350,AT4G36040,AT1G22710,AT4G25640,AT3G51910,AT3G57180,AT1G19650,AT5G54630,AT3G16150,AT5G24970,AT5G13770,AT3G03310,AT1G06430,AT1G27460,AT5G53080,AT1G03550,AT4G13505,AT1G63840,AT2G39580,AT1G64400,AT5G46350,AT3G16110,AT4G32770,AT5G40890,AT5G13570,AT5G54380,AT1G03560,AT2G24420,AT4G34000,AT3G27960,AT2G39350,AT2G41890,AT2G43680,AT2G38370,AT1G79750,AT3G24190,AT3G30300,AT1G49380,AT5G44020,AT4G38360,AT1G09420,AT2G28930,AT4G01400,AT3G29090,AT3G14650,AT3G29810,AT4G23620,AT5G11270,AT1G78610,AT1G15810,AT4G37000,AT3G05850,AT3G20770,AT1G64770,AT5G63520,AT3G13460,AT1G75760,AT3G18190,AT5G66950,AT1G72790,AT3G50790,AT5G39610,AT3G19680,AT1G72150,AT3G12685,AT1G50250,AT3G62150,AT5G22510,AT2G37750,AT5G38520,AT1G50290,AT2G32450,AT4G22720,AT5G14450,AT2G31840,AT5G16180,AT3G26030,AT3G02690,AT4G17550,AT1G71720,AT1G66150,AT1G71480,AT5G09230,AT3G60370,AT1G04350,AT4G30620,AT5G14120,AT5G44130,AT5G42310,AT1G32500,AT5G03940,AT3G05090,AT1G67920,AT1G70100,AT5G67570,AT4G04350,AT1G34380,AT3G19480,AT4G02570,AT4G02340,AT3G15770,AT5G16910,AT4G28740,AT4G35090,AT3G22104,AT4G33950,AT1G45474,AT2G34680,AT5G03900,AT1G75730,AT3G22750,AT5G01210,AT5G48340,AT3G26070,AT5G11410,AT2G31530,AT3G08530,AT1G67500,AT3G60810,AT5G67030,AT5G35750,AT3G26640,AT3G54350,AT5G44680,AT3G46960,AT4G24175,AT3G22120,AT1G68190,AT1G15340,AT1G57680,AT3G07300,AT2G38270,AT3G26710,AT4G33660,AT4G26700,AT3G60860,AT1G64680,AT2G19480,AT2G32290,AT4G19670,AT3G09050,AT4G38540,AT3G12930,AT1G08610,AT1G74380,AT1G02100,AT1G32700,AT5G19500,AT4G30270,AT1G43620,AT2G41680,AT3G04340,AT1G79600,AT1G66180,AT1G49500,AT5G04140,AT4G14510,AT4G08580,AT3G23070,AT4G35450,AT5G12980,AT5G57250,AT3G46210,AT4G32300,AT5G58350,AT2G43520,AT5G43750,AT5G11000,AT2G24270,AT3G06410,AT4G19420,AT1G70790,AT3G21300,AT4G25080,AT5G44340,AT1G43170,AT3G04650,AT3G15880,AT1G66130,AT3G27530,AT5G51140,AT1G75750,AT5G06340,AT1G27540,AT5G35790,AT3G29185,AT4G03140,AT5G26830,AT2G21280,AT3G18040,AT4G08870,AT5G64260,AT5G58120,AT3G18035,AT1G67950,AT4G20130,AT5G45170,AT1G52260,AT3G26980,AT5G40600,AT4G33670,AT5G23690,AT5G46420,AT2G37240,AT1G23740,AT4G27240,AT2G44420,AT5G09670,AT3G62660,AT5G17710,AT2G38040,AT5G59900,AT1G14685,AT2G35155,AT5G38530,AT5G12860,AT1G12270,AT3G18524,AT1G14870,AT2G32240,AT2G05830,AT4G32190,AT5G40660,AT5G19850,AT4G00630,AT4G16440,AT4G33520,AT3G63410,AT3G14720,AT2G32040,AT4G36780,AT2G47270,AT1G72180,AT2G44120,AT5G19770,AT1G65220,AT1G08750,AT5G18310,AT5G42240,AT1G32920,AT1G21830,AT4G09900,AT2G35840,AT3G24050,AT3G50550,AT2G17230,AT5G39980,AT1G50450,AT5G64280,AT4G10480,AT1G20090,AT2G38760,AT1G47740,AT4G16860,AT3G48640,AT4G39210,AT3G50480,AT4G15210,AT3G43740,AT1G66100,AT1G32900,AT5G59130,AT2G16990,AT4G18270,AT1G56650,AT4G13800,AT3G59300,AT5G45940,AT5G50030,AT1G35720,AT5G25100,AT1G59720,AT3G12110,AT1G59700,AT4G11000,AT1G02400,AT1G67360,AT3G12520,AT4G03050,AT1G14880,AT1G27580,AT2G44140,AT3G11130,AT3G26080,AT4G08900,AT4G13510,AT5G01215,AT5G17900,AT5G19780 MOROHASHI_META-ANALYSIS_GL1DM_24H_DN Down-regulated genes from meta-analysis (q<0.05) by GL1DM 24hrs (Table S 2 PubmedID:19247443) AT5G50740,AT5G42800,AT5G06060,AT1G62422,AT5G03040,AT1G03300,AT2G42600,AT3G51890,AT2G33040,AT1G19690,AT2G30930,AT2G37770,AT5G02030,AT4G02990,AT2G44060,AT5G15350,AT5G01010,AT5G10360,AT5G53120,AT5G02130,AT2G28605,AT3G60480,AT3G54090,AT3G13000,AT4G17090,AT1G58807,AT5G14780,AT2G20050,AT3G60245,AT2G25250,AT3G13235,AT5G24380,AT1G62560,AT1G09680,AT3G57000,AT5G14660,AT3G10690,AT4G00090,AT1G67120,AT1G09250,AT5G20290,AT5G53500,AT5G67290,AT2G04350,AT1G65440,AT5G25440,AT2G33330,AT5G27670,AT4G08850,AT1G25390,AT1G22640,AT5G56910,AT5G08370,AT5G03200,AT5G51700,AT2G37300,AT5G51550,AT4G24670,AT2G34640,AT1G06790,AT4G39960,AT1G73100,AT1G04270,AT5G67130,AT4G35180,AT1G47840,AT4G29490,AT1G78580,AT1G14720,AT3G57630,AT3G18830,AT1G18540,AT1G61260,AT1G54050,AT4G11260,AT1G11410,AT3G20440,AT5G66200,AT5G37360,AT5G41360,AT1G24100,AT4G39800,AT2G41410,AT3G47070,AT1G68070,AT3G46530,AT4G08280,AT3G48710,AT3G05490,AT5G38630,AT1G09230,AT3G07390,AT5G06860,AT2G25510,AT5G49945,AT1G54490,AT2G28470,AT4G09510,AT3G11400,AT5G67150,AT1G23830,AT2G01090,AT3G52180,AT2G18600,AT3G16780,AT2G17280,AT1G62730,AT4G14680,AT3G07730,AT3G15140,AT3G16120,AT3G13845,AT5G61570,AT2G37190,AT4G39730,AT3G56240,AT2G45520,AT4G21850,AT3G55740,AT1G12020,AT5G49410,AT1G31550,AT1G28190,AT5G52030,AT2G20240,AT3G51260,AT5G13520,AT1G70890,AT1G51160,AT3G06440,AT1G68600,AT4G36750,AT4G04840,AT1G16610,AT2G28900,AT4G09020,AT2G19570,AT4G35910,AT3G15760,AT3G22970,AT4G08690,AT3G13810,AT5G27450,AT1G18570,AT2G21640,AT2G40780,AT4G29390,AT4G02060,AT4G18040,AT1G31500,AT1G09390,AT2G46470,AT1G04080,AT3G04630,AT3G52740,AT4G03210,AT2G21970,AT5G62920,AT2G43650,AT1G13670,AT3G52390,AT5G12440,AT1G35280,AT3G49240,AT3G44620,AT2G18380,AT5G52810,AT5G43150,AT1G16340,AT1G11840,AT1G03160,AT5G20680,AT4G17615,AT4G20780,AT1G74030,AT5G53250,AT5G61660,AT4G22530,AT5G20540,AT5G38690,AT4G39950,AT4G14400,AT1G28400,AT4G10060,AT2G32720,AT4G18750,AT2G34510,AT1G18390,AT4G27560,AT5G59480,AT5G24770,AT2G17120,AT3G18000,AT1G53160,AT5G22270,AT3G10940,AT5G50760,AT1G26560,AT1G11090,AT5G40450,AT5G48880,AT4G39940,AT4G19400,AT1G17990,AT1G21140,AT5G37990,AT1G17140,AT2G38860,AT4G28780,AT5G23010,AT2G18230,AT5G28630,AT5G06160,AT1G78410,AT5G01015,AT1G77920,AT3G02790,AT3G55120,AT1G52890,AT5G28030,AT1G78050,AT4G23810,AT1G01560,AT1G17960,AT1G61800,AT1G30530,AT3G57260,AT1G18020,AT1G47860,AT1G59124,AT2G11060,AT4G01170,AT4G27570,AT5G06865,AT5G24780,AT5G41370,AT2G12210 MOROHASHI_META-ANALYSIS_GL3DM_4H_UP Up-regulated genes from meta-analysis (q<0.05) by GL3 DM 4hrs (Table S 2 PubmedID:19247443) AT4G09900,AT3G18035,AT1G03160,AT3G48710,AT1G75760,AT3G57260,AT4G19420,AT1G75730,AT4G08280,AT5G52810,AT5G62920,AT5G01010,AT2G21970,AT4G38360,AT3G60480,AT2G17230,AT1G77920,AT5G27450,AT4G16860,AT4G17550,AT3G22104,AT5G38690,AT2G18600,AT2G37750,AT4G03210,AT4G22720,AT3G62660,AT3G13310,AT5G40600,AT2G16990,AT5G58770,AT2G37770,AT2G38270,AT3G16120,AT3G55120,AT1G15810,AT4G27240,AT4G33520,AT5G11410,AT4G28740,AT1G09390,AT5G13570,AT1G21140,AT1G66180,AT3G26030,AT3G05850,AT1G50290,AT2G44130,AT5G03040,AT5G09230,AT2G44420,AT3G09050,AT5G38630,AT2G38370,AT1G59720,AT1G47740,AT5G20680,AT5G57250,AT3G60810,AT5G64260,AT3G60370,AT4G38620,AT3G15140,AT4G19670,AT1G08750,AT2G32290,AT4G39960,AT5G13520,AT1G31500,AT2G43650,AT1G35720,AT2G41410,AT1G67500,AT2G18230,AT5G14780,AT3G07300,AT4G11260,AT3G14720,AT1G09420,AT1G67360,AT1G06790,AT1G09230,AT4G36780,AT3G52740,AT1G14685,AT1G19690,AT1G03550,AT4G25640,AT1G78610,AT4G35090,AT5G63520,AT1G62730,AT5G44130,AT5G40890,AT5G48340,AT1G22710,AT1G20090,AT4G09510,AT5G12440,AT3G59300,AT1G70890,AT5G46350,AT5G40660,AT5G41360,AT1G03300,AT5G20540,AT1G63840,AT5G27670,AT2G32450,AT5G59480,AT1G57680,AT4G24670,AT5G52030,AT3G51910,AT1G75900,AT1G52260,AT3G12685,AT1G75750,AT4G30270,AT5G49945,AT4G33950,AT1G51160,AT5G39980,AT3G30300,AT4G23620,AT3G05090,AT3G11400,AT4G35910,AT5G56910,AT5G14450,AT2G28470,AT3G22970,AT1G09680,AT4G13800,AT3G04650,AT3G29810,AT1G27460,AT5G23690,AT1G71480,AT5G38530,AT3G16110,AT2G28605,AT2G44120,AT1G43170,AT2G40780,AT5G67130,AT5G61570,AT4G39210,AT3G19480,AT2G47270,AT4G02990,AT2G35155,AT5G06860,AT1G54490,AT3G27960,AT1G11090,AT2G25250,AT3G06440,AT1G17140,AT4G02060,AT5G50760,AT5G19850,AT3G52390,AT3G04630,AT1G34380,AT2G15310,AT4G28780,AT5G37990,AT4G00630,AT2G38860,AT4G18270,AT5G51550,AT5G67570,AT1G65440,AT4G08690,AT5G50740,AT5G53500,AT3G13000,AT4G32770,AT2G20240,AT5G42310,AT3G06410,AT5G11270,AT3G48640,AT3G20770,AT4G27560,AT3G15880,AT3G14650,AT3G03310,AT5G06160,AT3G19680,AT5G49410,AT1G70790,AT4G34000,AT1G64770,AT4G15210,AT1G78050,AT5G35750,AT1G70100,AT3G50480,AT1G59700,AT5G09670,AT5G59900,AT1G66100,AT1G14720,AT5G12980,AT5G42800,AT3G43740,AT5G03200,AT2G44140,AT4G27570,AT5G06865,AT5G41370 MOROHASHI_META-ANALYSIS_GL3DM_4H_DN Down-regulated genes from meta-analysis (q<0.05) by GL3 DM 4hrs (Table S 2 PubmedID:19247443) AT5G53080,AT5G66950,AT1G53160,AT5G03900,AT5G53120,AT4G01400,AT4G39730,AT5G45170,AT2G34680,AT3G46960,AT4G25080,AT2G28900,AT3G26710,AT2G20050,AT1G43620,AT5G44020,AT4G03140,AT2G37300,AT1G64400,AT3G26070,AT2G25510,AT3G07730,AT1G04270,AT1G68600,AT5G02130,AT4G33670,AT4G30620,AT4G19400,AT5G24970,AT1G11840,AT3G46530,AT2G24270,AT1G72150,AT3G13460,AT2G01090,AT2G17280,AT5G58350,AT1G56650,AT4G18750,AT1G27540,AT2G30930,AT4G14400,AT3G21300,AT2G28930,AT5G45940,AT4G29490,AT1G66130,AT5G54380,AT5G43150,AT1G11410,AT2G05830,AT2G31530,AT5G67150,AT5G66200,AT4G08580,AT5G25100,AT5G18310,AT1G22640,AT2G39350,AT5G59130,AT1G13670,AT5G22510,AT5G17710,AT4G23810,AT1G73100,AT5G06340,AT5G19770,AT3G24190,AT3G12110,AT5G64280,AT5G44340,AT3G44620,AT3G12520,AT3G12930,AT4G24175,AT1G26560,AT3G13810,AT1G06430,AT1G32900,AT1G67950,AT2G44060,AT3G24050,AT4G35450,AT4G22530,AT4G38540,AT1G79750,AT2G38040,AT1G02400,AT5G19500,AT5G10360,AT1G12270,AT2G43680,AT2G24420,AT3G29185,AT1G21830,AT1G17990,AT2G33040,AT5G20290,AT1G61260,AT1G74380,AT1G74030,AT1G49380,AT3G46210,AT2G43520,AT1G25390,AT5G40450,AT3G18040,AT4G18040,AT3G23070,AT1G49500,AT1G08610,AT3G50550,AT2G18380,AT3G15760,AT1G66150,AT4G09020,AT1G02100,AT2G37190,AT2G32040,AT5G48880,AT2G04350,AT3G56240,AT3G62150,AT5G46420,AT3G57000,AT2G21280,AT1G32700,AT5G25440,AT3G10940,AT3G57180,AT1G12020,AT1G03560,AT2G19480,AT3G26640,AT4G20780,AT1G19650,AT3G18190,AT3G02790,AT4G37000,AT1G14870,AT5G51140,AT4G35180,AT3G27530,AT3G63410,AT4G14510,AT3G57630,AT1G16610,AT1G50450,AT4G16440,AT5G12860,AT3G18524,AT3G13235,AT5G42240,AT5G14660,AT4G10480,AT1G15340,AT2G46470,AT5G67030,AT3G52180,AT5G06060,AT1G50250,AT5G03940,AT1G24100,AT5G16910,AT1G62422,AT4G39800,AT2G34510,AT5G67290,AT1G68190,AT3G51890,AT3G04340,AT4G14680,AT3G15770,AT5G44680,AT1G45474,AT4G26700,AT4G17090,AT3G22750,AT5G38520,AT5G08370,AT5G13770,AT5G16180,AT5G50030,AT1G79600,AT3G20440,AT1G18390,AT5G35790,AT1G32500,AT5G04140,AT3G51260,AT1G28190,AT5G01210,AT1G71720,AT1G72180,AT2G35840,AT2G32720,AT5G37360,AT5G24380,AT1G61800,AT1G16340,AT4G36750,AT3G08530,AT3G54090,AT3G18000,AT5G23010,AT1G35280,AT1G62560,AT5G43750,AT3G10690,AT4G02340,AT4G08870,AT1G23740,AT1G18540,AT4G02570,AT3G60860,AT5G54630,AT4G04350,AT2G32240,AT3G16150,AT5G11000,AT5G26830,AT3G22120,AT2G37240,AT4G08850,AT1G32920,AT3G16780,AT4G29390,AT1G47840,AT2G41680,AT5G39610,AT1G52890,AT1G30530,AT3G55740,AT4G32300,AT5G53250,AT4G39940,AT2G31840,AT4G00090,AT2G34640,AT5G14120,AT3G54350,AT3G49240,AT1G28400,AT1G09250,AT1G58807,AT5G51700,AT1G04350,AT2G19570,AT1G65220,AT1G78580,AT3G26980,AT3G05490,AT2G42600,AT2G39580,AT4G10060,AT1G54050,AT4G04840,AT1G23830,AT3G07390,AT1G04080,AT4G20130,AT5G12350,AT5G22270,AT5G15350,AT2G33330,AT3G18830,AT3G60245,AT1G18570,AT3G22060,AT1G31550,AT5G02030,AT4G11000,AT4G32190,AT1G72790,AT3G29090,AT5G61660,AT4G39950,AT4G33660,AT3G13845,AT5G28030,AT2G17120,AT1G64680,AT2G45520,AT1G68070,AT2G38760,AT1G01560,AT3G47070,AT4G36040,AT1G67120,AT3G02690,AT4G13505,AT3G50790,AT2G41890,AT1G17960,AT1G67920,AT5G58120,AT5G24770,AT4G17615,AT4G21850,AT1G78410,AT4G03050,AT2G21640,AT5G01015,AT5G28630,AT1G14880,AT1G18020,AT1G27580,AT1G47860,AT1G59124,AT2G11060,AT3G11130,AT3G26080,AT4G01170,AT4G08900,AT4G13510,AT5G01215,AT5G17900,AT5G19780,AT5G24780,AT2G12210 MOROHASHI_META-ANALYSIS_GL3DM_24H_UP Up-regulated genes from meta-analysis (q<0.05) by GL3 DM 24hrs (Table S 2 PubmedID:19247443) AT2G44130,AT3G13310,AT4G38620,AT1G67500,AT5G40450,AT2G15310,AT4G36040,AT3G05850,AT5G64280,AT3G51910,AT3G22060,AT1G67120,AT5G66950,AT1G75900,AT4G25640,AT1G70100,AT3G16150,AT1G09230,AT2G39350,AT1G70790,AT1G09420,AT5G48340,AT3G03310,AT1G35280,AT3G48710,AT2G35155,AT3G06440,AT4G32190,AT2G43680,AT2G20050,AT2G04350,AT1G22710,AT3G08530,AT2G39580,AT1G75730,AT3G05090,AT2G18380,AT5G67570,AT1G54490,AT1G03550,AT4G08580,AT5G52030,AT1G58807,AT4G14510,AT3G62150,AT5G67030,AT3G22120,AT3G57180,AT3G04340,AT5G13520,AT3G30300,AT4G34000,AT3G10690,AT3G13460,AT5G38690,AT1G66180,AT5G39610,AT2G28470,AT5G35750,AT1G15340,AT3G26070,AT4G35090,AT5G54630,AT5G16180,AT5G28030,AT2G24270,AT2G24420,AT5G46350,AT5G16910,AT5G40890,AT3G07730,AT2G38370,AT2G37750,AT1G19650,AT2G37770,AT1G79600,AT1G65440,AT5G09670,AT3G13810,AT5G19500,AT4G16440,AT1G03160,AT4G35910,AT5G51140,AT3G16120,AT2G32240,AT2G41890,AT5G58350,AT4G33660,AT1G68190,AT3G18035,AT5G53250,AT5G45170,AT5G41360,AT5G03900,AT1G50250,AT3G27530,AT1G12270,AT4G04350,AT4G30620,AT5G20680,AT3G52390,AT1G78610,AT5G42310,AT4G13505,AT4G26700,AT3G19480,AT3G09050,AT5G19850,AT5G09230,AT1G63840,AT2G47270,AT1G72150,AT5G14780,AT4G08870,AT5G67290,AT5G12440,AT1G08750,AT1G21140,AT2G34640,AT5G25100,AT1G04350,AT3G26030,AT1G79750,AT1G59720,AT1G49500,AT3G22970,AT5G06860,AT5G02030,AT4G17090,AT2G34680,AT1G06430,AT4G00630,AT2G42600,AT3G15880,AT5G13770,AT5G12860,AT4G38540,AT4G08850,AT2G38040,AT5G04140,AT4G22720,AT5G46420,AT1G50450,AT3G46960,AT4G19420,AT1G17960,AT4G30270,AT5G03040,AT1G65220,AT4G02570,AT3G22104,AT4G38360,AT3G07300,AT3G18524,AT3G62660,AT5G14120,AT1G09250,AT2G32450,AT2G43650,AT3G54350,AT1G71720,AT2G28930,AT4G32770,AT1G32700,AT5G27670,AT3G60860,AT5G06060,AT5G40600,AT5G44130,AT2G37190,AT1G03300,AT4G35450,AT5G35790,AT3G04630,AT1G47840,AT3G63410,AT5G26830,AT1G09680,AT1G43170,AT1G11410,AT2G37240,AT3G14720,AT5G44020,AT2G44420,AT3G24190,AT3G21300,AT5G50760,AT3G04650,AT5G19770,AT3G60370,AT3G60480,AT1G75750,AT4G28740,AT4G19400,AT5G24970,AT1G22640,AT4G39960,AT3G29810,AT5G11410,AT5G64260,AT1G16610,AT5G11270,AT4G20130,AT3G29090,AT3G27960,AT3G22750,AT2G43520,AT5G23690,AT1G04080,AT1G49380,AT5G56910,AT2G19480,AT3G46530,AT5G12350,AT1G02100,AT4G02060,AT4G16860,AT1G52260,AT2G01090,AT3G50480,AT1G32900,AT5G12980,AT5G24380,AT3G43740,AT1G66100,AT4G13800,AT5G03200,AT5G37990,AT2G16990,AT5G59130,AT4G15210,AT4G18270,AT1G13670,AT2G25510,AT1G56650,AT5G50030,AT4G39210,AT5G42800,AT1G23740,AT5G45940,AT5G53080,AT1G62560,AT1G47860,AT1G59124,AT2G11060,AT2G44140,AT3G11130,AT3G26080,AT4G01170,AT4G08900,AT4G13510,AT5G06865,AT5G17900,AT5G19780,AT5G41370,AT2G12210 MOROHASHI_META-ANALYSIS_GL3DM_24H_DN Down-regulated genes from meta-analysis (q<0.05) by GL3 DM 24hrs (Table S 2 PubmedID:19247443) AT3G51890,AT5G06340,AT1G50290,AT5G50740,AT2G20240,AT5G11000,AT1G61260,AT1G59700,AT5G66200,AT1G20090,AT1G27540,AT3G13235,AT4G01400,AT4G02990,AT5G22510,AT4G00090,AT3G50550,AT1G15810,AT3G20770,AT5G01210,AT5G01010,AT5G58120,AT3G12110,AT3G56240,AT2G41680,AT3G60245,AT2G32290,AT3G13000,AT2G17280,AT2G35840,AT1G75760,AT5G58770,AT3G24050,AT5G18310,AT1G32920,AT2G44120,AT1G64770,AT5G54380,AT5G51550,AT4G02340,AT1G66150,AT4G25080,AT1G47740,AT3G52740,AT5G51700,AT1G21830,AT4G09900,AT4G29490,AT3G54090,AT3G29185,AT3G20440,AT2G21970,AT4G33950,AT5G44340,AT1G08610,AT4G10480,AT5G43150,AT1G77920,AT2G38270,AT4G11260,AT5G59480,AT5G14450,AT5G20290,AT1G04270,AT3G12520,AT2G17230,AT5G06160,AT4G33520,AT2G21640,AT2G33040,AT1G11090,AT3G60810,AT1G71480,AT1G73100,AT5G38530,AT1G57680,AT5G03940,AT1G18540,AT3G47070,AT3G16110,AT4G32300,AT1G62422,AT3G16780,AT2G44060,AT3G11400,AT1G14870,AT3G02690,AT4G09510,AT3G57000,AT2G18230,AT1G14720,AT1G64680,AT3G55740,AT1G35720,AT5G17710,AT5G49410,AT3G18190,AT3G26710,AT4G18750,AT1G16340,AT2G19570,AT3G14650,AT5G13570,AT5G43750,AT1G78580,AT5G67130,AT2G30930,AT2G37300,AT1G72790,AT2G18600,AT1G11840,AT2G41410,AT1G14685,AT3G15140,AT5G15350,AT3G50790,AT5G37360,AT3G12685,AT5G38630,AT2G28900,AT1G45474,AT5G39980,AT1G67950,AT2G21280,AT5G40660,AT3G59300,AT5G61570,AT3G51260,AT3G13845,AT2G05830,AT3G19680,AT2G32720,AT1G12020,AT1G66130,AT5G27450,AT1G68070,AT1G26560,AT4G36750,AT3G57260,AT1G67920,AT3G18830,AT4G03140,AT4G29390,AT1G51160,AT5G38520,AT1G31500,AT5G53120,AT5G10360,AT1G23830,AT1G52890,AT5G49945,AT5G02130,AT4G17550,AT1G28400,AT4G39730,AT1G68600,AT2G25250,AT5G08370,AT5G14660,AT5G42240,AT1G09390,AT1G43620,AT5G20540,AT5G63520,AT2G40780,AT3G23070,AT2G28605,AT1G53160,AT1G54050,AT2G32040,AT1G25390,AT1G74380,AT5G25440,AT3G52180,AT4G33670,AT4G10060,AT1G72180,AT4G18040,AT2G38760,AT2G31840,AT3G15770,AT3G49240,AT3G18040,AT4G08690,AT3G18000,AT1G31550,AT3G26640,AT2G45520,AT3G44620,AT1G03560,AT3G06410,AT4G03210,AT5G23010,AT4G08280,AT1G19690,AT3G12930,AT1G17990,AT2G34510,AT4G19670,AT1G27460,AT1G61800,AT3G46210,AT1G17140,AT2G46470,AT5G52810,AT4G37000,AT1G24100,AT1G18570,AT1G67360,AT1G70890,AT1G18390,AT4G14400,AT5G57250,AT4G04840,AT1G64400,AT3G15760,AT4G24670,AT1G06790,AT1G32500,AT2G17120,AT4G21850,AT5G61660,AT4G27240,AT1G30530,AT1G28190,AT3G26980,AT3G55120,AT4G24175,AT2G31530,AT5G22270,AT1G74030,AT1G62730,AT4G28780,AT4G09020,AT3G57630,AT4G14680,AT5G48880,AT2G33330,AT3G10940,AT2G38860,AT5G44680,AT5G67150,AT1G34380,AT4G36780,AT1G02400,AT3G05490,AT5G24770,AT1G78050,AT4G39950,AT5G53500,AT3G07390,AT4G03050,AT4G39940,AT3G02790,AT4G22530,AT4G39800,AT4G20780,AT4G11000,AT4G23620,AT5G01015,AT5G62920,AT3G48640,AT5G28630,AT1G78410,AT5G59900,AT4G17615,AT1G01560,AT4G27560,AT4G35180,AT4G23810,AT1G14880,AT1G18020,AT1G27580,AT4G27570,AT5G01215,AT5G24780 MOROHASHI_META-ANALYSIS_WT/GL1_UP Up-regulated genes from meta-analysis (q<0.05) by WT/gl1 (Table S 2 PubmedID:19247443) AT4G21850,AT4G03050,AT1G78410,AT3G48640,AT5G39610,AT1G14870,AT1G27540,AT5G28030,AT4G11000,AT1G35280,AT1G67920,AT5G22270,AT5G53250,AT1G52890,AT1G61800,AT5G50760,AT1G01560,AT2G37750,AT1G02400,AT2G47270,AT5G28630,AT4G36040,AT1G21140,AT1G18570,AT1G66180,AT1G72790,AT5G25100,AT2G43520,AT5G01210,AT1G17960,AT1G50290,AT1G09420,AT5G58350,AT4G38540,AT2G39350,AT1G47840,AT2G32240,AT1G28190,AT3G29810,AT5G24380,AT3G16150,AT1G23830,AT4G17615,AT5G06860,AT1G75750,AT3G07390,AT2G21640,AT3G22060,AT4G30270,AT3G05850,AT5G64260,AT1G32700,AT5G25440,AT3G51890,AT2G41410,AT1G32920,AT3G13460,AT5G18310,AT2G19570,AT3G24050,AT1G62422,AT1G18390,AT4G20780,AT3G13845,AT3G51910,AT5G58120,AT3G56240,AT1G21830,AT4G23810,AT3G15770,AT1G63840,AT4G35180,AT3G07730,AT5G11000,AT1G09250,AT1G61260,AT3G16120,AT3G22750,AT5G40450,AT5G46350,AT5G16910,AT3G15760,AT2G38760,AT3G13310,AT2G38860,AT2G30930,AT1G68070,AT1G13670,AT1G03550,AT3G50550,AT3G13235,AT4G02570,AT1G22640,AT4G39940,AT5G14780,AT5G61660,AT3G62150,AT4G08850,AT5G02030,AT2G17120,AT3G27530,AT5G51700,AT5G26830,AT1G09230,AT2G18600,AT3G05490,AT1G79750,AT2G43680,AT5G12350,AT1G12020,AT4G32300,AT3G26980,AT4G13505,AT3G13810,AT5G63520,AT3G08530,AT5G44340,AT2G25250,AT3G26640,AT3G18830,AT4G39950,AT3G20770,AT3G55740,AT1G24100,AT5G44020,AT5G44130,AT3G22120,AT5G54630,AT2G18380,AT2G38040,AT4G36750,AT1G49500,AT1G25390,AT5G50030,AT3G60860,AT2G44130,AT3G29090,AT1G02100,AT5G14120,AT1G72150,AT4G33660,AT2G19480,AT3G54350,AT4G16440,AT3G03310,AT5G64280,AT1G14880,AT1G27580,AT1G47860,AT2G11060,AT2G44140,AT3G11130,AT4G01170,AT4G13510,AT5G01215,AT5G06865,AT2G12210 MOROHASHI_META-ANALYSIS_WT/GL1_DN Down-regulated genes from meta-analysis (q<0.05) by WT/gl1 (Table S 2 PubmedID:19247443) AT3G05090,AT3G57260,AT2G46470,AT1G73100,AT3G57000,AT3G51260,AT3G18524,AT2G24420,AT1G67120,AT5G67290,AT4G33670,AT4G36780,AT2G32450,AT1G50250,AT5G17710,AT4G25640,AT1G79600,AT5G13770,AT2G33040,AT1G75760,AT2G45520,AT1G54490,AT4G15210,AT4G22530,AT5G51140,AT1G11090,AT3G46210,AT1G22710,AT1G19690,AT5G15350,AT3G26030,AT4G04840,AT5G19770,AT3G18040,AT1G77920,AT3G11400,AT3G44620,AT1G66130,AT3G52740,AT2G41890,AT1G51160,AT1G45474,AT3G16110,AT4G19670,AT4G20130,AT5G03040,AT5G66950,AT1G57680,AT4G35450,AT2G15310,AT3G18035,AT3G49240,AT5G20290,AT5G20680,AT3G06440,AT3G60370,AT4G35910,AT3G60245,AT1G16340,AT5G45940,AT1G06790,AT3G02690,AT5G27450,AT4G30620,AT5G01010,AT4G27240,AT2G28900,AT4G14680,AT3G16780,AT3G62660,AT5G10360,AT2G20240,AT4G03140,AT5G04140,AT4G18040,AT5G66200,AT4G29390,AT3G04630,AT3G57630,AT1G04080,AT4G04350,AT4G11260,AT1G12270,AT2G37190,AT4G26700,AT4G29490,AT1G78610,AT1G67500,AT1G59720,AT2G42600,AT1G65440,AT2G44120,AT3G19680,AT4G39730,AT4G19420,AT1G74380,AT3G46960,AT4G02340,AT5G09670,AT2G32720,AT2G38270,AT3G63410,AT5G02130,AT3G50790,AT1G75730,AT5G03940,AT4G00090,AT3G07300,AT1G71720,AT1G62730,AT1G15340,AT3G02790,AT5G44680,AT4G08690,AT2G21280,AT1G20090,AT5G61570,AT5G49410,AT2G39580,AT4G23620,AT1G16610,AT2G32040,AT1G66150,AT5G01015,AT3G22970,AT2G44060,AT3G22104,AT2G35840,AT1G06430,AT5G13570,AT5G16180,AT5G38630,AT5G53080,AT1G78050,AT4G25080,AT4G38620,AT1G47740,AT2G31840,AT4G33520,AT3G06410,AT3G29185,AT1G31500,AT2G37770,AT2G40780,AT1G17990,AT1G19650,AT3G04340,AT1G34380,AT5G43750,AT1G08610,AT5G24970,AT3G26710,AT5G06060,AT1G04350,AT1G50450,AT5G40890,AT3G52390,AT5G06160,AT3G14720,AT2G24270,AT5G06340,AT5G67150,AT3G12110,AT4G32190,AT2G28930,AT3G54090,AT5G38520,AT5G12440,AT5G46420,AT4G08870,AT5G53500,AT1G08750,AT1G67950,AT2G28470,AT1G32500,AT3G12685,AT3G15880,AT2G37300,AT4G10480,AT5G40660,AT1G14720,AT1G68190,AT5G41360,AT1G28400,AT5G42240,AT1G54050,AT2G38370,AT5G19500,AT5G23690,AT5G12860,AT2G33330,AT5G57250,AT5G38530,AT5G20540,AT1G78580,AT4G01400,AT3G10690,AT5G14450,AT1G03560,AT3G57180,AT5G39980,AT3G13000,AT2G43650,AT4G00630,AT4G33950,AT1G30530,AT1G52260,AT1G31550,AT3G21300,AT1G43620,AT1G72180,AT1G04270,AT1G65220,AT3G24190,AT4G37000,AT4G27560,AT2G28605,AT4G24175,AT3G60810,AT4G09900,AT2G41680,AT5G52030,AT2G44420,AT2G34640,AT3G60480,AT4G38360,AT2G17230,AT5G11270,AT5G09230,AT5G54380,AT5G62920,AT1G70790,AT5G40600,AT3G59300,AT4G17550,AT4G18750,AT1G11410,AT3G09050,AT3G12930,AT2G17280,AT5G37360,AT3G23070,AT3G15140,AT2G31530,AT4G22720,AT1G58807,AT2G37240,AT1G03300,AT1G18540,AT3G20440,AT1G35720,AT4G08580,AT2G20050,AT5G67030,AT2G34680,AT5G19850,AT1G75900,AT5G11410,AT5G48340,AT1G15810,AT1G09680,AT1G62560,AT5G52810,AT1G74030,AT4G14400,AT5G51550,AT2G35155,AT5G35790,AT2G32290,AT1G70100,AT4G03210,AT5G14660,AT3G47070,AT1G59700,AT5G43150,AT1G64680,AT3G04650,AT4G28740,AT3G48710,AT5G49945,AT5G67130,AT2G21970,AT1G23740,AT4G14510,AT3G18190,AT2G04350,AT3G52180,AT4G02990,AT4G10060,AT1G17140,AT5G03900,AT4G02060,AT1G67360,AT1G26560,AT5G38690,AT2G34510,AT5G35750,AT1G49380,AT4G34000,AT5G37990,AT5G12980,AT4G19400,AT5G45170,AT1G11840,AT1G70890,AT5G58770,AT5G56910,AT1G64400,AT5G53120,AT1G14685,AT5G59900,AT1G03160,AT2G05830,AT4G24670,AT5G67570,AT3G30300,AT4G08280,AT5G42310,AT5G13520,AT3G12520,AT2G16990,AT5G59480,AT5G08370,AT3G10940,AT4G09020,AT3G27960,AT4G09510,AT4G35090,AT5G23010,AT3G14650,AT4G39960,AT1G27460,AT1G09390,AT5G24770,AT5G48880,AT1G68600,AT3G26070,AT3G18000,AT4G18270,AT4G17090,AT5G22510,AT4G28780,AT1G56650,AT1G71480,AT5G50740,AT2G18230,AT1G43170,AT4G39800,AT3G50480,AT3G55120,AT3G43740,AT5G59130,AT1G64770,AT4G32770,AT4G13800,AT5G03200,AT1G53160,AT1G32900,AT3G19480,AT4G39210,AT4G16860,AT5G27670,AT2G01090,AT3G46530,AT2G25510,AT5G42800,AT1G66100,AT1G18020,AT1G59124,AT3G26080,AT4G08900,AT4G27570,AT5G17900,AT5G19780,AT5G24780,AT5G41370 CHENG_ABA2-MUTANT-HORMONE_UP Up-significant changes of gene expression in the aba2 mutant- Hormone-related genes (Table S1 PubmedID:19513806) AT5G35735,AT1G59500,AT5G50760,AT2G33830,AT5G51810,AT1G70700,AT5G54610,AT3G11820,AT5G04720,AT2G01530,AT1G33590,AT1G18570,AT4G16890,AT1G02360,AT3G02840,AT2G34930,AT1G71400,AT5G05410,AT4G35770,AT4G20830,AT3G15500,AT2G17840,AT3G51910,AT4G21870,AT1G19320,AT5G20230,AT4G31800,AT3G55840,AT2G02120,AT1G65390,AT1G14540,AT2G43530,AT4G14060,AT1G29395,AT2G26020,AT5G16980,AT1G65870,AT1G01060,AT2G33380,AT5G66400,AT2G42540,AT1G76410,AT1G20823,AT5G27420,AT3G52450,AT4G36410,AT1G60190 CHENG_ETR1-MUTANT-HORMONE_UP Up-significant changes of gene expression in the etr1 mutant -Hormone-related genes (Table S1 PubmedID:19513806) AT5G18060,AT3G03840,AT1G52830,AT1G44350,AT1G23080,AT3G59900,AT1G19050,AT2G40670,AT3G21510,AT1G52820,AT1G74670,AT1G20510,AT3G25760,AT2G06050,AT5G13220,AT1G17380,AT2G44080,AT4G20830,AT2G38750,AT5G16980,AT4G10270,AT2G34930,AT2G29500,AT2G43530,AT2G02120,AT1G18710,AT5G01880,AT2G14580,AT5G46330 CHENG_EIN2-MUTANT-HORMONE_UP Up-significant changes of gene expression in the ein2 mutant-Hormone-related genes (Table S1 PubmedID:19513806) AT1G74670,AT5G14920,AT3G21510,AT3G25760,AT5G42650,AT1G19640,AT1G54040,AT1G18710,AT2G43530,AT4G26790,AT5G51440,AT2G34810,AT1G19610,AT1G66100,AT5G24780,AT1G53540,AT1G19670,AT1G52040,AT4G14400,AT2G42540,AT3G45140,AT4G23600,AT3G57260,AT1G72260,AT3G22231,AT1G11000,AT2G26560,AT2G14580,AT3G16770,AT4G33720,AT1G60190,AT4G36410 CHENG_-ABAÐYLENE_ABA2-MUTANT_UP Up-significant changes of gene expression -ABA- and ethylene-related gene expression in the aba2 mutants (Table 1 PubmedID:19513806) AT1G12010,AT2G20880,AT1G52340,AT5G59220,AT5G15960,AT2G29090 CHENG_-ABAÐYLENE_ETR1-MUTANT_UP Up-significant changes of gene expression -ABA- and ethylene-related gene expression in the etr1 mutants (Table 1 PubmedID:19513806) AT4G37770,AT2G40940,AT1G77330,AT1G04310,AT3G16770,AT5G25350,AT4G26080,AT2G29090 CHENG_EIN2-ABA-ETH_UP Up-significant changes of gene expression -ABA- and ethylene-related gene expression in the ein2 mutants (Table 1 PubmedID:19513806) AT4G37770,AT3G23150,AT2G40940,AT5G03280,AT1G04310,AT5G25350,AT5G67030,AT3G14440,AT5G15960,AT3G02480 HU_LIGHT_35S-MIF1_SEEDLINGS_UP Up-altered expression (Light_Fold Change) in 35S:MIF1 seedlings (false discovery rate <0.1; MIF1, MINI ZINC FINGER 1) (Table S1 PubmedID:16412086) AT3G56060,AT1G22710,AT2G16380,AT2G21080,AT5G63710,AT4G38420,AT2G21880,AT2G38300,AT1G03400,AT1G22690,AT1G06830,AT1G03440,AT5G16240,AT2G32860,AT1G07640,AT3G44970,AT4G04540,AT1G76190,AT2G26580,AT1G03055,AT2G24520,AT4G04840,AT4G26830,AT1G78530,AT1G49470,AT3G23050,AT1G29450,AT2G37640,AT1G74670,AT5G63180,AT3G03090,AT1G67910,AT3G16370,AT2G21540,AT3G06070,AT4G10120,AT4G38770,AT3G18050,AT2G04570,AT3G20820,AT5G25610,AT4G38690,AT1G52190,AT1G08810,AT5G66310,AT3G50440,AT4G36540,AT1G69530,AT2G15050,AT5G55620,AT1G11410,AT3G05800,AT5G57780,AT4G37800,AT2G46070,AT3G61550,AT1G68600,AT1G75880,AT5G64770,AT1G51805,AT1G22500,AT2G01530,AT1G78290,AT1G61810,AT3G10450,AT5G67520,AT2G24190,AT1G12400,AT5G44380,AT3G04070,AT5G59780,AT1G77380,AT2G42610,AT1G29050,AT2G34650,AT4G13030,AT5G03230,AT3G16450,AT2G01890,AT3G59700,AT1G13710,AT2G16700,AT1G56010,AT3G27210,AT3G14230,AT1G72200,AT4G20110,ATMG00630,AT3G43790,AT1G21100,AT2G31120,AT3G05690,AT5G57655,AT2G26020,AT5G60760,AT4G19420,AT1G23120,AT3G05770,AT4G33150,AT5G25770,AT5G08240,AT2G22860,AT5G53870,AT1G73260,AT5G58520,AT1G19530,AT1G28100,AT3G51430,AT3G49120,AT3G01970,AT3G20470,AT2G31110,AT3G03470,AT3G16770,AT2G16890,AT4G34180,AT3G01420,AT1G77920,AT5G64570,AT3G49780,AT2G37740,AT1G11070,AT1G15790,AT5G36220,AT1G09740,AT5G06740,AT2G38530,AT5G10210,AT5G39520,AT1G60740,AT2G24580,AT2G19970,AT5G66630,AT4G16240,AT2G43535,AT3G26770,AT4G27170,AT1G62810,AT1G74660,AT5G13080,AT4G27140,AT2G19570,AT1G78780,AT4G16260,AT1G03880,AT4G11650,AT2G16530,AT5G37740,AT1G18100,AT3G14280,AT1G17020,AT5G28020,AT4G04410,AT1G03890,AT2G43510,AT3G52780,AT1G59960,AT5G43780,AT4G18930,AT2G01520,AT1G29280,AT2G46750,AT1G01190,AT3G14060,AT1G47540,AT4G32650,AT5G27410,AT3G19270,AT4G31875,AT3G21720,AT3G13175,AT1G28130,AT4G27160,AT5G20710,AT3G45130,AT1G30700,AT4G27150,AT3G04720,AT5G24160,AT5G48560,AT3G20100,AT2G46950,AT2G16005,AT2G19900,AT1G74590,AT5G40420,AT5G44120,AT3G27660,AT1G19610,AT2G43530,AT1G13300,AT1G73190,AT4G25140,AT1G12010,AT4G28520,AT5G03860,AT4G16160,AT1G48130,AT3G21370,AT2G34600,AT3G17520,AT2G05510,AT1G68880,AT1G32560,AT5G62490,AT2G35300,AT1G52690,AT1G04560,AT3G02480,AT2G44480,AT5G54740,AT3G13760,AT3G51810,AT5G17490,AT4G26740,AT2G33070,AT3G22640,AT5G50260,AT1G17810 HU_DARK_35S-MIF1_SEEDLINGS_UP Up-significantly altered expression (Dark_Fold Change) in 35S:MIF1 seedlings (false discovery rate <0.1; MIF1, MINI ZINC FINGER 1) (Table S1 PubmedID:16412086) AT3G23050,AT1G29450,AT2G37640,AT1G74670,AT5G63180,AT3G03090,AT1G67910,AT3G16370,AT2G21540,AT3G06070,AT4G10120,AT4G38770,AT3G18050,AT2G04570,AT3G20820,AT5G25610,AT4G38690,AT1G52190,AT1G08810,AT5G66310,AT3G50440,AT4G36540,AT1G69530,AT2G15050,AT5G55620,AT1G11410,AT3G05800,AT5G57780,AT4G37800,AT2G46070,AT3G61550,AT1G68600,AT1G75880,AT5G64770,AT1G51805,AT1G04240,AT1G12080,AT2G28260,AT3G20570,AT4G16690,AT5G11420,AT4G22190,AT2G42900,AT2G24270,AT4G16515,AT3G03840,AT2G14900,AT1G29510,AT4G24510,AT1G34760,AT4G19380,AT3G23760,AT1G53400,AT1G22430,AT1G48240,AT1G67050,AT4G25830,AT4G09890,AT3G23030,AT2G35880,AT5G45670,AT3G26932,AT3G01670,AT3G48970,AT1G12240,AT4G38580,AT1G29430,AT5G15310,AT3G52290,AT1G05230,AT5G55730,AT1G71720,AT2G19660,AT1G14280,AT1G22910,AT3G23880,AT1G31920,AT1G68840,AT3G49160,AT1G02950,AT1G35180,AT3G02500,AT4G35320,AT2G06850,AT3G03830,AT1G06350,AT2G40610,AT4G29020,AT2G01420,AT1G47270,AT3G20450,AT1G65310,AT1G01120,AT4G08150,AT1G64355,AT4G20870,AT5G02020,AT2G35860,AT1G68810,AT3G51420,AT5G14740,AT5G53980,AT4G32320,AT1G12500,AT5G06700,AT4G34980,AT1G01900,AT3G15900,AT4G36530,AT3G12710,AT5G59030,AT4G34770,AT5G35790,AT5G62280,AT1G68230,AT1G53700,AT3G49220,AT5G62550,AT3G13590,AT5G20630,AT2G20875,AT3G15480,AT1G23090,AT3G29240,AT3G09580,AT4G17695,AT5G22580,AT2G21140,AT3G47295,AT5G55740,AT1G72070,AT1G18400,AT5G54510,AT5G18970,AT3G13510,AT1G55260,AT3G07010,AT5G02760,AT5G49700,AT1G33470,AT4G12980,AT1G61260,AT1G11545,AT5G01075,AT3G17380,AT2G32800,AT4G25080,AT1G21060,AT5G57760,AT4G23820,AT4G33220,AT4G28270,AT1G29440,AT1G29520,AT1G77870,AT3G62950,AT5G51890,AT1G43590,AT3G52920,AT4G16985,AT5G09660,AT2G21220,AT4G34650,AT4G38400,AT3G51600,AT1G62360,AT1G65960,AT1G09530,AT2G42870,AT2G27140,AT1G68530,AT1G68190,AT5G22870,AT5G39080,AT2G27050,AT5G13730,AT4G37760,AT1G79700,AT2G41740,AT5G03760,AT1G24764,AT4G34760,AT2G15960,ATCG00570,AT4G34970,AT1G74880,AT1G17700,AT3G22150,AT3G01680,AT1G62770,AT1G14890,AT5G57240,AT1G64390,AT5G04810,AT3G18850,AT1G69160,AT2G38120,AT5G41900,AT4G38850,AT1G21830,AT2G44210,AT1G70210,AT5G43700,AT1G05810,AT2G17730,AT3G63240,AT3G09160,AT4G25260,AT2G26250,AT4G34250,AT3G16470,AT1G63180,AT4G08685,AT5G59590,AT4G05110,AT4G17245,AT3G21870,AT2G41200,AT5G53830,AT4G35720,AT3G02110,AT3G17420,AT2G34770,AT3G11210,AT5G46240,AT2G46710,AT1G70100,AT1G21400,AT5G20270,AT3G06150,AT4G16680,AT1G73370,AT4G37150,AT1G32060,AT2G17880,AT1G11260,AT5G04190,AT5G48900,AT3G47340,AT5G24580,AT1G44350,AT3G06840,AT2G22890,AT1G71695,AT5G02890,AT1G77210,AT5G03960,AT3G61150,AT2G40300,AT5G12250,AT5G09440,AT4G00360,AT3G01490,AT1G53690,AT3G50560,AT1G09750,AT2G05540,AT1G01320,AT5G16650,AT4G14560,AT1G21540,AT1G20190,AT1G22330,AT3G59900,AT5G08330,AT1G51500,AT3G14370,AT1G68330,AT4G14540,AT5G38770,AT3G53720,AT2G47930,AT5G64330,AT2G33310,AT5G17700,AT1G51940,AT1G20390,AT5G47640,AT1G05760,AT5G54250,AT5G22860,AT3G05900,AT4G21750,AT1G10060,AT1G66350,AT5G04530,AT1G64670,AT4G18970,AT1G78970,AT5G52920,AT1G32800,AT2G26690,AT3G29370,AT4G12730,AT1G61900,AT3G49360,AT5G62940,AT5G14470,AT2G21200,AT4G24250,AT2G28950,ATCG01110,AT1G04680,AT5G39860,AT5G37300,AT5G45040,AT1G02640,AT1G17840,AT5G53870,AT4G25620,AT3G13750,AT4G28080,AT4G12880,AT5G56860,AT2G41300,AT1G29460,AT3G28180,AT2G34490,AT2G43050,AT2G45470,AT3G53280,AT5G53970,AT1G80280,AT3G01440,AT2G40475,AT1G17200,AT5G17950,AT1G13920,AT5G25840,AT1G78430,AT4G23030,AT1G70940,AT3G58120,AT5G02490,AT2G16280,AT3G02170,AT4G27440,AT5G14410,AT4G17810,AT1G49650,AT5G57180,AT5G65310,AT5G61660,AT5G44670,AT1G60010,AT5G46960,AT1G69690,AT4G35250,AT5G53490,AT3G42800,AT1G04250,AT5G44130,AT4G39330,AT1G03870,AT5G48460,AT2G10940,AT3G12610,AT3G11700,AT5G18650,AT1G21670,AT3G10080,AT1G29670,AT1G04800,AT1G12860,AT5G49690,AT1G18650,AT4G14480,AT5G50335,AT3G23810,AT1G12845,AT2G35760,AT5G46330,AT5G19140,AT4G36110,AT3G52840,AT1G58180,AT1G29500,AT2G22200,AT1G72180,AT1G13250,AT5G06530,AT1G49975,AT4G01680,AT1G10070,AT4G00410,AT5G49450,AT1G42550,AT4G01950,AT1G78170,AT3G23700,AT4G11190,AT5G63450,AT2G25930,AT2G41050,AT5G23860,AT1G27950,AT2G27360,AT3G05400,AT5G23350,AT2G25220,AT1G21820,AT4G15560,AT1G25450,AT5G18290,AT1G28010,AT5G24930,AT1G23530,AT1G04310,AT2G02450,AT5G01740,AT3G62410,AT2G26330,AT1G78490,AT3G43720,AT1G68500,AT1G25230,AT1G68010,AT1G26560,AT4G15660,AT2G30540,AT5G02140,AT4G12970,AT2G38210,AT1G02200,AT5G18060,AT1G27030,AT2G33480,AT1G32080,AT5G58140,AT2G04270,AT5G06690,AT5G04140,AT4G32880,AT1G67600,AT5G64340,AT1G08500,AT4G38840,AT1G53450,AT5G57800,AT1G17230,AT5G03120,AT4G25960,AT2G23180,AT5G02160,AT4G33666,AT2G37130,AT1G14840,AT4G18280,AT5G07000,AT3G49260,AT1G77490,AT5G24570,AT3G50890,AT2G46990,AT4G38860,AT1G30360,AT4G24350,AT1G52510,AT3G48350,AT1G64740,AT5G45950,AT3G48460,AT1G60450,AT1G06980,AT4G13790,AT5G01210,AT4G30350,AT3G48720,AT3G06770,AT3G16180,AT1G64770,AT4G21730,AT5G57170,AT1G79510,AT2G45560,AT2G27740,AT3G60530,AT2G13360,AT1G53090,AT2G40880,ATCG00520,AT4G00050,AT2G22990,AT1G76460,AT3G49790,AT3G62820,AT2G15090,AT1G49730,AT5G01790,AT4G33190,AT3G24720,AT5G22920,AT5G56720,AT3G15540,AT1G03820,AT3G61060,AT3G55500,AT2G44080,AT2G42690,AT5G66330,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AT4G25140,AT1G12010,AT4G28520,AT5G03860,AT4G16160,AT1G48130,AT3G21370,AT2G34600,AT3G17520,AT2G05510,AT1G68880,AT1G32560,AT5G62490,AT2G35300,AT1G52690,AT1G04560,AT3G02480,AT2G44480,AT5G54740,AT3G13760,AT3G51810,AT5G17490,AT4G26740,AT2G33070,AT3G22640,AT5G50260,AT1G17810,AT2G43600,AT3G02780,AT3G23470,AT3G12500,AT4G15390,AT1G11580,AT1G66280,AT3G16440,AT1G02360,AT5G23830,AT2G29750,AT5G42590,AT5G60530,AT1G50060,AT5G10170,AT5G62340,AT5G15600,AT1G73620,AT4G26320,AT1G69600,AT5G47980,AT2G31390,AT1G52070,AT5G62330,AT1G72900,AT4G26470,AT4G31320,AT1G77510,AT5G40510,AT1G70170,AT2G48120,AT3G51450,AT3G15357,AT4G22530,AT3G50260,AT1G33265,AT5G14020,AT1G06620,AT1G20380,AT2G46150,AT5G04970,AT2G37460,AT4G19690,AT5G42600,AT2G01140,AT3G62680,AT1G13750,AT1G49570,AT4G22930,AT5G42840,AT4G25250,AT2G18550,AT3G26590,AT1G51420,AT3G26460,AT4G24660,AT1G52060,AT4G14980,AT4G10350,AT5G63660,AT1G65500,AT5G62530,AT1G68570,AT2G18800,AT1G06120,AT5G60950,AT5G26260,AT5G45070,AT3G14940,AT2G19590,AT3G22550,AT5G51500,AT4G40070,AT5G13490,AT4G37160,AT2G25810,AT2G33790,AT4G25090,AT3G23190,AT5G42630,AT4G24110,AT3G21230,AT3G09940,AT5G20550,AT5G60520,AT2G23410,AT5G42580,AT3G18420,AT1G47600,AT5G66690,AT1G26930,AT3G01190,AT5G53090,AT2G20515,AT4G26220,AT2G30340,AT1G79450,AT1G21010,AT1G64920,AT4G23590,AT5G66280,AT4G30140,AT5G63560,AT4G20460,AT3G04320,AT1G01030,AT4G11010,AT1G71692,AT1G21250,AT5G51520,AT5G09220,AT3G19010,AT1G14940,AT3G58810,AT4G20860,AT2G47130,AT4G00670,AT4G21830,AT5G05600,AT5G58784,AT4G19030,AT5G55560,AT3G13610,AT4G18360,AT5G56540,AT1G77120,AT2G02850,AT5G23530,AT3G54040,AT1G67330,AT5G54370,AT4G40090,AT1G02810,AT3G08860,AT4G31470,AT3G20110,AT5G22440,AT2G30840,AT3G14680,AT2G29740,AT1G71890,AT3G14620,AT3G18400,AT1G08350,AT5G22460,AT3G51860,AT2G46140,AT1G09155,AT1G47840,AT5G11920,AT3G22850,AT3G22570,AT1G56680,AT5G17820,AT5G01040,AT5G19520,AT2G39040,AT1G21270,AT1G12160,AT5G52670,AT2G34830,AT3G23830,AT4G23010,AT1G13950,AT3G06460,AT2G39110,AT3G54960,AT3G25250,AT4G28410,AT4G38740,AT1G71880,AT1G74500,AT1G70810,AT5G61350,AT1G08990,AT2G23620,AT4G39955,AT2G48090,AT5G24313,AT3G29970,AT3G23250,AT3G15230,AT5G13150,AT3G43190,AT2G18600,AT2G47140,AT3G19390,AT1G17190,AT1G80820,AT1G64590,AT2G17280,AT5G08570,AT5G46230,AT2G27730,AT1G19190,AT2G25940,AT1G33750,AT4G36220,AT1G14220,AT5G60800,AT3G20370,AT2G41970,AT5G26310,AT2G23630,AT1G65690,AT5G19110,AT5G43590,AT4G19810,AT5G61650,AT2G15120,AT1G24320,AT3G06050,AT2G34610,AT1G02220,AT2G38940,AT2G14100,AT2G04025,AT3G59370,AT4G02270,AT2G31085,AT1G29020,AT1G55430,AT2G14460,AT2G21045,AT1G65570,AT3G23800,AT5G10130,AT5G58010,AT5G53990,AT3G15240,AT3G53980,AT1G73330,AT5G38780,AT5G21060,AT5G42650,AT4G13480,AT4G39980,AT3G62280,AT5G38900,AT2G01880,AT2G41800,AT5G20830,AT1G60730,AT3G16670,AT4G24670,AT4G30170,AT4G10500,AT5G26655,AT1G69150,AT2G38390,AT5G43520,AT1G05250,AT2G18370,AT5G15180,AT1G53680,AT1G23410,AT4G13440,AT3G14210,AT3G49190,AT2G18360,AT3G61760,AT5G35940,AT1G14960,AT1G24430,AT2G28690,AT3G28580,AT5G16510,AT3G21680,AT5G67450,AT2G37820,AT3G59140,AT2G37790,AT5G37690,AT3G62270,AT3G02910,AT3G19430,AT4G14060,AT2G37430,AT5G09980,AT1G52800,AT2G43660,AT1G65790,AT2G38870,AT2G39530,AT1G14950,AT4G05200,AT1G48930,AT5G64100,AT1G22440,AT3G25110,AT2G24980,AT2G43200,AT5G51160,AT5G47740,AT4G23700,AT5G64900,AT4G29690,AT3G54580,AT5G19040,AT5G62165,AT5G61520,AT2G32270,AT3G46720,AT4G29740,AT4G27652,AT3G51540,AT2G22780,AT4G15910,AT5G54300,AT1G61840,AT5G46690,AT2G43880,AT1G31950,AT2G15370,AT1G51860,AT5G08565,AT1G30370,AT3G15020,AT4G03210,AT1G20510,AT2G43610,AT1G05650,AT4G24140,AT3G14530,AT5G07550,AT2G25980,AT3G52180,AT4G33360,AT4G25790,AT1G18980,AT5G57090,AT5G14330,AT5G54040,AT1G12950,AT1G65730,AT5G12340,AT2G24610,AT4G14020,AT1G73160,AT5G38930,AT3G06860,AT1G53830,AT3G15300,AT1G69870,AT3G58550,AT2G27000,AT4G12330,AT5G06330,AT1G68150,AT4G19680,AT3G48850,AT3G50010,AT3G13090,AT3G54590,AT4G12130,AT1G52050,AT5G14750,AT4G01700,AT1G29270,AT4G37940,AT4G00680,AT4G39940,AT5G47950,AT2G35270,AT4G33070,AT1G12740,AT3G45410,AT1G74030,AT3G59220,AT3G08770,AT3G29250,AT3G46660,AT2G30130,AT1G54970,AT2G39510,AT3G54640,AT1G12040,AT5G24270,AT1G34510,AT5G46900,AT1G02813,AT3G46270,AT4G37530,AT5G24070,AT2G02630,AT1G05280,AT5G20480,AT2G46650,AT1G14080,AT5G60730,AT4G30660,AT2G43570,AT2G26520,AT4G36060,AT3G10520,AT5G37600,AT2G43590,AT3G24290,AT1G34520,AT2G38860,AT2G15390,AT1G62300,AT2G36970,AT1G62500,AT4G30640,AT1G23750,AT2G41120,AT1G49860,AT5G24410,AT5G22555,AT1G12560,AT5G65010,AT2G37390,AT2G47540,AT1G64900,AT4G05390,AT1G78990,AT5G38390,AT3G10940,AT2G23120,AT2G29340,AT5G48940,AT1G53920,AT3G27170,AT5G50730,AT1G23130,AT5G52810,AT5G06630,AT3G51440,AT5G46040,AT2G37440,AT3G60160,AT1G52660,AT2G32660,AT1G78320,AT5G67400,AT5G09480,AT4G37850,AT3G44860,AT3G45140,AT1G78410,AT5G14150,AT5G05290,AT5G46270,AT3G20210,AT5G54770,AT2G24850,AT5G43180,AT2G22930,AT2G47200,AT1G77530,AT3G13100,AT4G34880,AT1G62290,AT4G25820,AT2G17850,AT1G28610,AT4G09760,AT5G35190,AT5G02360,AT3G29780,AT5G24140,AT1G35330,AT3G19320,AT3G20590,AT4G00880,AT3G26290,AT4G10270,AT4G14680,AT3G26280,AT1G15210,AT3G27950,AT5G10850,AT3G28760,AT1G30850,AT5G10720,AT2G36650,AT1G28290,AT2G20520,AT4G37400,AT1G44050,AT4G39950,AT4G33560,AT5G05500,AT5G13990,AT4G33730,AT1G30870,AT1G65190,AT4G37430,AT2G44380,AT1G55380,AT3G15990,AT5G04120,AT4G26010,AT1G57590,AT4G28940,AT5G47810,AT5G58670,AT4G26880,AT5G09640,AT5G04220,AT1G56160,AT4G15290,AT4G16860,AT1G43800,AT2G27690,AT3G58060,AT1G78050,AT4G00160,AT5G19800,AT1G67100,AT1G62980,AT5G08260,AT4G01630,AT3G12230,AT2G46740,AT4G23190,AT5G03840,AT1G01750,AT5G49080,AT1G62710,AT3G48580,AT1G51830,AT1G24140,AT3G13960,AT3G01430,AT5G64110,AT4G15490,AT3G23410,AT4G27270,AT5G57540,AT4G26270,AT3G02610,AT2G34910,AT5G07190,AT5G25640,AT4G29800,AT2G18540,AT4G20000,AT5G06640,AT5G07200,AT1G13600,AT5G59310,AT1G01010,AT5G62800,AT5G56080,AT4G28650,AT1G46264,AT1G23720,AT4G04990,AT3G53960,AT5G42830,AT3G10710,AT5G01870,AT5G18170,AT1G34570,AT5G62630,AT5G56320,AT1G24735,AT5G22410,AT3G50300,AT3G61990,AT2G23540,AT3G50610,AT5G23840,AT3G19610,AT5G58860,AT3G26830,AT2G38830,AT4G30320,AT3G61930,AT2G35980,AT5G60280,AT5G37990,AT4G21590,AT5G04960,AT4G36700,AT1G51850,AT5G38170,AT1G76470,AT2G16060,AT3G26320,AT5G57530,AT1G23160,AT4G22080,AT5G22470,AT4G23600,AT2G23640,AT3G16660,AT5G51850,AT1G61550,AT3G04520,AT3G13950,AT2G33520,AT3G50980,AT5G50200,AT3G58200,AT5G04950,AT4G23300,AT1G05300,AT2G47550,AT5G43890,AT2G44370,AT3G30740,AT5G44550,AT3G56980,AT1G72930,AT3G49840,AT3G22930,AT4G02240,AT1G66470,AT4G39510,AT3G01570,AT1G68250,AT2G14210,AT1G65490,AT5G02350,AT4G10310,AT5G23020,AT4G25220,AT4G04460,AT3G55150,AT4G25440,AT3G15570,AT4G09990,AT3G46810,AT5G66985,AT4G16563,AT5G03310,AT1G73780,AT1G55020,AT1G21310,AT2G23110,AT2G12290,AT2G25890,AT2G37770,AT3G24240,AT4G26460,AT1G22600,AT2G16660,AT2G45750,AT1G73600,AT5G47220,AT3G51350,AT4G03090,AT2G30750,AT2G28490,AT2G42560,AT4G39130,AT2G38465,AT1G27990,AT1G54860,AT3G07720,AT3G18570,AT5G18840,AT5G59320,AT1G23100,AT1G11080,AT4G20390,AT5G13170,AT2G21820,AT5G57260,AT5G35260,AT1G72100,AT2G21490,AT2G25240,AT3G54940,AT4G22070,AT3G24650,AT3G46670,AT2G43620,AT5G43770,AT1G27470,AT1G24280,AT5G10120,AT5G25020,AT1G65090,AT2G29380,AT1G32900,AT2G15010,AT3G11050,AT5G40330,AT1G80130,AT1G22360,AT4G29180,AT5G59170,AT5G49350,AT2G29320,AT3G21380,AT3G58450,AT2G40220,AT5G01300,AT1G61800,AT1G14770,AT3G25760,AT5G66400,AT2G38905,AT1G02700,AT3G03450,AT4G31830,AT5G46050,AT2G28420,AT3G49960,AT3G19920,AT1G60090,AT3G50970,AT4G22470,AT5G16460,AT3G24000,AT3G14225,AT3G49760,AT1G74010,AT5G48300,AT1G27730,AT5G24130,AT2G36640,AT5G17450,AT1G74360,AT1G42580,AT5G66780,AT1G21110,AT5G45690,AT3G18250,AT2G40170,AT1G66690,AT5G14450,AT1G66800,AT5G50600,AT1G73010,AT1G47980,AT4G21020,AT4G22510,AT3G60330,AT1G78090,AT1G77950,AT1G72360,AT2G47770,AT4G34410,AT1G54230,AT2G32030,AT1G65860,AT5G39110,AT5G44310,AT5G18450,AT3G10200,AT1G06160,AT3G60420,AT4G12480,AT2G29300,AT5G06730,AT3G28550,AT4G11460,AT1G72920,AT3G14880,AT2G19800,AT5G63580,AT1G74490,AT3G15670,AT4G13770,AT5G25820,AT1G20500,AT4G30650,AT2G27300,AT1G27140,AT5G07330,AT1G16410,AT1G64970,AT4G36430,AT5G52300,AT1G78370,AT3G25190,AT4G18650,AT3G53040,AT1G69880,AT2G27380,AT5G45630,AT4G33720,AT1G17380,AT5G01670,AT1G05510,AT5G38910,AT4G28530,AT5G55240,AT1G64160,AT1G15330,AT1G69920,AT1G72940,AT3G48700,AT1G70880,AT1G43160,AT1G26420,AT3G51750,AT1G48660,AT1G54870,AT1G76930,AT2G30770,AT2G18140,AT1G80090,AT4G12490,AT1G03790,AT5G06760,AT2G23270,AT1G31750,AT3G03190,AT1G75040,AT1G71250,AT1G26380,AT1G23070,AT3G05260,AT3G19710,AT3G59930,AT2G40310,AT1G48470,AT3G13672,AT4G35690,AT1G16850,AT5G27580,AT5G14650,AT5G25180,AT2G40330,AT5G04000,AT2G18340,AT5G23010,AT4G36600,AT3G56350,AT1G53270,AT1G14930,AT3G58990,AT4G39210,AT1G69630,AT3G57950,AT4G39500,AT4G12500,AT1G26410,AT5G42380,AT1G09500,AT4G09600,AT4G10020,AT3G15280 HU_35S-MIF1_SEEDLING_UP Overexpressed genes alteration in the 35S::MIF1 seedlings (Table 2 PubmedID:16412086) AT1G74660 HU_35S-MIF1-SEEDING_GA_DIFF Significant expression alteration -GA-related genes in the 35S::MIF1 seedlings (Table 2 PubmedID:16412086) AT1G74670,AT1G22690,AT2G14900,AT1G66350,AT3G03450,AT5G17490,AT5G07200,AT1G52800 HU_AUXIN-BR_35S-MIF1-SEEDLING_DIFF Significant expression alteration -Auxin- and BR-related genes in the 35S::MIF1 seedlings (Table 2 PubmedID:16412086) AT4G14560,AT3G23030,AT1G04240,AT5G43700,AT1G15580,AT1G52830,AT3G23050,AT1G04250,AT3G15540,AT2G46990,AT4G38850,AT4G34770,AT2G21200,AT4G36110,AT2G18010,AT2G21220,AT4G38860,AT4G13790,AT4G34760,AT3G03830,AT3G03840,AT5G18060,AT1G29430,AT1G29440,AT1G29450,AT1G29460,AT1G29500,AT1G29510,AT3G53250,AT5G54510,AT2G46530,AT1G70940,AT2G01420,AT1G23080,AT1G62500,AT4G31320,AT1G28130 HU_35S-MIF1-SEEDLING_ABA_DIFF Significant expression alteration -ABA-related genes in the 35S::MIF1 seedlings (Table 2 PubmedID:16412086) AT1G52690,AT3G51810,AT2G40170,AT4G26740,AT5G07190,AT3G19430,AT1G32560,AT3G53040,AT2G23110,AT2G35300,AT1G04560,AT5G60520,AT5G60530,AT5G54370,AT3G15670,AT3G17520,AT5G44310,AT5G40420,AT4G25140,AT3G27660,AT2G25890,AT5G07550,AT3G01570,AT4G27140,AT4G27150,AT4G27160,AT4G27170,AT5G54740,AT5G44120,AT1G03880,AT4G28520,AT4G36700,AT2G28490,AT3G22640,AT1G03890,AT3G02480,AT5G62490,AT1G23130,AT3G24650,AT2G40220 HU_35S-MIF1-SEEDLING_CELL-ELONGATION/EXPANSION_DIFF Significant expression alteration -Cell elongation/expansion-related genes in the 35S::MIF1 seedlings (Table 2 PubmedID:16412086) AT1G69530,AT2G37640,AT3G29030,AT2G40610,AT1G20190,AT3G55500,AT4G38400,AT4G37800,AT1G11545,AT1G65310,AT3G44990,AT2G36870,AT2G21140,AT4G38770,AT1G31580,AT5G05290,AT1G12560,AT5G56320,AT1G62980,AT3G48580,AT5G57530,AT5G57540,AT4G25820,AT2G18800,AT1G54970,AT3G62680 JENSEN_COL/ATAF-BGH_UP Up-regulated by COL vs atAF bgh (Table 2 PubmedID:18694460) psbF,AT4G14640,AT4G16700,AT4G16960,AT4G16190,AT4G15780,AT1G28330,AT5G22000,AT1G32130,AT1G32230,AT5G09290,AT5G08380,AT5G19940,AT4G36730,AT4G36520,AT1G51850,AT5G16880,AT5G15440,AT5G35080,AT5G27920,AT5G26731,AT5G25560,AT5G04880,AT5G66630,AT5G66250,AT5G64500,AT5G64410,AT5G63910,AT5G63800,AT5G63210,AT5G63190,AT5G63030,AT5G62680,AT5G61380,AT5G61060,AT5G61250,AT5G60280,AT5G60590,AT5G59680,AT5G58200,AT5G57550,AT5G57940,AT5G57655,AT5G54270,AT5G54680,AT5G54080,AT5G53650,AT5G53870,AT5G53550,AT5G53170,AT5G52740,AT5G52820,AT5G49760,AT5G47890,AT5G47850,AT5G46480,AT5G46500,AT5G46490,AT5G46330,AT5G46295,AT5G42900,AT5G42030,AT5G41700,AT5G40910,AT5G40960,AT5G40690,AT5G40230,AT5G39760,AT5G38650,AT5G37540,AT5G23020,AT5G19140,AT5G18780,AT5G18630,AT5G11920,AT5G12210,AT5G11000,AT5G10740,AT5G10960,AT5G10810,AT5G10860,AT5G10610,AT5G10380,AT5G07820,AT5G07340,AT5G06820,AT5G06240,AT5G05320,AT5G04490,AT5G03240,AT5G03050,AT5G02290,AT5G02150,AT5G01750,AT3G63500,AT3G62290,AT3G62130,AT3G62190,AT3G61260,AT3G61670,AT3G60340,AT3G60180,AT3G57550,AT3G57360,AT3G55850,AT3G55770,AT3G55450,AT3G54890,AT3G54790,AT3G54190,AT3G53310,AT3G51920,AT3G51000,AT3G50830,AT3G50920,AT3G50000,AT3G50140,AT3G49340,AT3G48530,AT3G48750,AT3G48140,AT3G47340,AT3G47590,AT3G47470,AT3G47000,AT3G47010,AT3G45860,AT3G45310,AT3G42630,AT3G42790,AT4G39950,AT4G37470,AT4G37820,AT4G35780,AT4G34480,AT4G32050,AT4G30640,AT4G28270,AT4G27880,AT4G27130,AT4G27320,AT4G26550,AT4G26060,AT4G25500,AT4G24450,AT4G23660,AT4G23240,AT4G23310,AT4G22720,AT4G21980,AT4G21810,AT4G21120,AT4G21180,AT4G20380,AT4G19170,AT4G18130,AT4G13810,AT4G13820,AT4G13030,AT4G12570,AT4G12040,AT4G11300,AT4G09760,AT4G10050,AT4G08330,AT4G07820,AT4G05150,AT4G04510,AT4G01750,AT4G01610,AT4G01130,AT4G01120,AT4G00720,AT4G00355,AT4G00150,AT1G25390,AT1G18590,AT1G66970,AT1G66960,AT1G20350,AT1G33990,AT1G34150,AT1G29760,AT1G58300,AT1G58360,AT1G13560,AT1G30360,AT3G02340,AT1G72060,AT3G11010,AT1G66180,AT3G28510,AT3G28540,AT3G13710,AT3G26470,AT3G19000,AT3G22460,AT3G13560,AT3G25010,AT3G20120,AT3G20250,AT3G14920,AT1G43000,AT2G33990,AT3G24900,AT3G24954,AT3G26580,AT3G26220,AT3G26230,AT3G20420,AT3G23110,AT3G29250,AT3G27010,AT3G13062,AT3G19515,AT3G23640,AT3G14280,AT3G16770,AT3G02770,AT3G05840,AT3G05760,AT3G10770,AT3G04060,AT3G03390,AT3G07520,AT3G02130,AT3G03870,AT1G15790,AT1G12290,AT1G21310,AT1G21270,AT1G52290,AT1G29395,AT1G72150,AT1G74170,AT1G68110,AT1G67980,AT1G29970,AT1G67580,AT1G74440,AT1G80500,AT1G70620,AT1G63800,AT1G63900,AT1G69720,AT1G53280,AT1G62420,AT1G19340,AT1G19330,AT1G49050,AT1G21390,AT1G02470,AT1G06110,AT1G26410,AT1G01240,AT1G01290,AT1G12780,AT1G20050,AT1G48550,AT1G53100,AT1G08450,AT1G08460,AT1G11360,AT1G56150,AT1G27520,AT1G64230,AT1G11310,AT1G11260,AT1G21770,AT1G62810,AT1G16260,AT1G28580,AT1G13090,AT1G14740,AT1G14790,AT1G59900,AT1G79380,AT1G65790,AT1G75750,AT1G54210,AT1G54440,AT1G54360,AT1G05570,AT2G31810,AT2G31870,AT2G31880,AT2G27150,AT2G17120,AT2G17040,AT2G04690,AT2G42790,AT2G22450,AT1G54730,AT1G22640,AT1G67520,AT1G11930,AT1G10210,AT1G43130,AT1G04550,AT1G62290,AT1G61460,AT1G03610,AT1G23040,AT1G61520,AT1G30960,AT2G42890,AT2G18280,AT2G22660,AT2G46550,AT2G15960,AT2G05540,AT2G15880,AT2G25520,AT2G25440,AT2G32080,AT2G24390,AT2G24160,AT2G02410,AT2G28840,AT2G28830,AT2G02350,AT2G07180,AT2G46260,AT2G46220,AT2G46900,AT2G29020,AT2G45820,AT2G34430,AT2G34300,AT2G41080,AT2G37540,AT2G44180,AT2G31000,AT2G43970,AT2G39940,AT2G26190,AT2G35020,AT2G02760,AT5G53180,AT5G42660,AT4G04410 JENSEN_COL/ATAF-BGH_DN Down-regulated by COL vs atAF bgh (Table 2 PubmedID:18694460) AT3G49620,AT1G23360,rpoC2,rbcL,AT2G39730,AT2G23300,AT2G40935,AT2G40890,AT2G41680,AT2G47590,AT5G12470,AT1G44575,AT4G15440,AT4G15210,AT4G16155,AT4G17260,AT4G15940,AT4G15490,AT4G15120,AT4G17300,AT4G17470,AT4G15620,AT4G15920,AT4G15110,AT4G14230,AT4G14090,AT1G25290,AT5G04160,AT5G04140,AT1G73330,AT1G51080,AT1G51110,AT1G51115,AT1G32220,AT5G13550,AT1G58080,AT1G26230,AT1G26220,AT5G09450,AT5G24780,AT5G28530,AT5G13110,AT5G13120,AT5G19440,AT5G20070,AT5G20080,AT5G19855,AT4G36400,AT4G36530,AT4G37040,AT1G31800,AT3G51820,AT3G44830,AT3G44890,AT1G57770,AT5G16710,AT5G16970,AT5G17050,AT5G16080,AT5G16010,AT5G16715,AT1G31690,AT5G35170,AT5G27560,AT5G27760,AT5G27380,AT5G27290,AT5G04830,AT5G67480,AT5G67070,AT5G67150,AT5G66440,AT5G66530,AT5G65890,AT5G65660,AT5G65020,AT5G65010,AT5G64580,AT5G64760,AT5G64230,AT5G63310,AT5G62840,AT5G62720,AT5G62220,AT5G62140,AT5G61780,AT5G61570,AT5G60540,AT5G59870,AT5G59910,AT5G60040,AT5G59770,AT5G59690,AT5G59515,AT5G58330,AT5G58310,AT5G58260,AT5G57950,AT5G57290,AT5G57410,AT5G55220,AT5G54900,AT5G54500,AT5G53920,AT5G53460,AT5G53470,AT5G53000,AT5G52570,AT5G52060,AT5G52110,AT5G51460,AT5G51060,AT5G51100,AT5G49940,AT5G50110,AT5G50210,AT5G48880,AT5G49030,AT5G48300,AT5G48470,AT5G47560,AT5G46740,AT5G46560,AT5G46290,AT5G45930,AT5G44380,AT5G43980,AT5G43970,AT5G43750,AT5G43140,AT5G43260,AT5G42890,AT5G42720,AT5G42270,AT5G41670,AT5G40850,AT5G40830,AT5G40580,AT5G40460,AT5G40160,AT5G39830,AT5G39320,AT5G38530,AT5G37260,AT5G37360,AT5G36700,AT5G35630,AT5G35620,AT5G35490,AT5G24160,AT5G24300,AT5G22620,AT5G22880,AT5G19220,AT5G22300,AT5G18790,AT5G18860,AT5G18550,AT5G18660,AT5G17310,AT5G17280,AT5G16450,AT5G14660,AT5G14570,AT5G13420,AT5G13750,AT5G13650,AT5G13040,AT5G12860,AT5G13280,AT5G13360,AT5G12160,AT5G12170,AT5G12190,AT5G11520,AT5G10470,AT5G10390,AT5G10830,AT5G10170,AT5G10140,AT5G08650,AT5G07590,AT5G07690,AT5G07000,AT5G07020,AT5G06340,AT5G05860,AT5G05470,AT5G04900,AT5G05200,AT5G04590,AT5G03650,AT5G03555,AT5G03490,AT5G02940,AT5G02590,AT5G02270,AT5G02430,AT5G01790,AT5G01410,AT3G63410,AT3G63140,AT3G62910,AT3G62810,AT3G62460,AT3G61770,AT3G62030,AT3G61220,AT3G61080,AT3G61100,AT3G59840,AT3G59140,AT3G57020,AT3G57180,AT3G56980,AT3G55800,AT3G55310,AT3G54900,AT3G55110,AT3G54750,AT3G54050,AT3G54110,AT3G53900,AT3G53890,AT3G53650,AT3G53560,AT3G53130,AT3G53180,AT3G52960,AT3G52390,AT3G51090,AT3G51620,AT3G50520,AT3G49680,AT3G48690,AT3G48420,AT3G47650,AT3G46940,AT3G46670,AT3G44620,AT3G44450,AT4G39710,AT4G39800,AT4G39990,AT4G39970,AT4G39730,AT4G39350,AT4G38970,AT4G39180,AT4G38710,AT4G37980,AT4G38370,AT4G37540,AT4G38320,AT4G37410,AT4G36220,AT4G35250,AT4G34490,AT4G34950,AT4G34590,AT4G34210,AT4G34200,AT4G34230,AT4G33660,AT4G33680,AT4G33960,AT4G33470,AT4G33520,AT4G33540,AT4G33700,AT4G33010,AT4G32590,AT4G32320,AT4G30810,AT4G30460,AT4G29590,AT4G29700,AT4G29130,AT4G28660,AT4G28330,AT4G28030,AT4G27460,AT4G27570,AT4G26850,AT4G26950,AT4G27030,AT4G25700,AT4G25460,AT4G25450,AT4G25130,AT4G24830,AT4G24930,AT4G24620,AT4G24280,AT4G24350,AT4G24340,AT4G22960,AT4G22890,AT4G22830,AT4G22753,AT4G21990,AT4G21210,AT4G20750,AT4G20760,AT4G20070,AT4G19985,AT4G19120,AT4G19400,AT4G18810,AT4G18820,AT4G13670,AT4G13890,AT4G13410,AT4G12830,AT4G12310,AT4G12060,AT4G11120,AT4G10810,AT4G05390,AT4G04610,AT4G04640,AT4G04870,AT4G04330,AT4G03400,AT4G02530,AT4G02940,AT4G01690,AT4G01895,AT4G01080,AT4G00440,AT4G00430,AT4G00050,AT1G32080,AT1G19670,AT4G10300,AT1G18040,AT1G07010,AT1G07260,AT1G18060,AT1G20810,AT1G56190,AT3G12510,AT1G66620,AT3G11170,AT3G10940,AT1G32550,AT1G75210,AT3G14770,AT3G18890,AT3G52370,AT3G52380,AT3G52230,AT3G27180,AT3G22200,AT3G15110,AT3G23940,AT3G23820,AT3G23990,AT3G13470,AT3G19590,AT3G19710,AT3G19210,AT3G19170,AT3G15352,AT3G24430,AT3G23810,AT3G27190,AT3G13110,AT3G24150,AT3G24170,AT3G26570,orf101b,AT3G16330,AT3G10840,AT3G25710,AT3G27060,AT3G13040,AT3G17120,AT3G25470,AT3G21750,AT3G21760,AT3G20790,AT3G16250,AT3G14570,AT3G18100,AT3G17790,AT3G21670,AT3G13930,AT3G23390,AT3G23410,AT3G14390,AT3G16630,AT3G15360,AT3G16560,AT3G02570,AT3G02450,AT3G06510,AT3G06680,AT3G06720,AT3G06700,AT3G04520,AT3G02730,AT3G02870,AT3G08740,AT3G08590,AT3G09720,AT3G09480,AT3G09540,AT3G11900,AT3G05800,AT3G11950,AT3G04000,AT3G03250,AT3G03220,AT3G10050,AT3G05730,AT3G05590,AT3G01410,AT3G04790,AT3G01660,AT3G01480,AT3G07670,AT3G01060,AT3G01120,AT3G16390,AT3G16470,AT1G17760,AT1G19140,AT1G56500,AT1G27960,AT1G52410,AT1G52280,AT1G42970,AT1G56505,AT1G77760,AT1G77450,AT1G77490,AT1G77670,AT1G64390,AT1G29530,AT1G47900,AT1G52220,AT1G73600,AT1G76690,AT1G76380,AT1G71500,AT1G74160,AT1G73790,AT1G78180,AT1G63220,AT1G33940,AT1G67570,AT1G68540,AT1G80380,AT1G80560,AT1G70610,AT1G63940,AT1G74030,AT1G69830,AT1G10960,AT2G41730,AT2G47260,AT2G43460,AT2G43550,AT2G43580,AT2G43710,AT2G43760,AT1G55920,AT1G53240,AT1G32470,AT1G32500,AT1G48030,AT1G78370,AT1G43710,AT1G43670,AT1G29050,AT1G21350,AT1G29130,AT1G02560,AT1G02475,AT1G06040,AT1G12250,AT1G07390,AT1G32860,AT1G12800,AT1G20020,AT1G26770,AT1G48520,AT1G48600,AT1G53090,AT1G07790,AT1G21070,AT1G14270,AT1G28390,AT1G01790,AT1G63610,AT1G49650,AT1G27700,AT1G18440,AT1G50140,AT1G76080,AT1G08250,AT1G15550,AT1G08230,AT1G15980,AT1G16080,AT1G30510,AT1G08280,AT1G11580,AT1G50450,AT1G11440,AT1G22380,AT1G64680,AT1G64500,AT1G56050,AT1G02910,AT1G02850,AT1G52510,AT1G74730,AT1G68660,AT1G64150,AT1G64200,AT1G11240,AT1G11280,AT1G50250,AT1G17090,AT1G17100,AT1G31340,AT1G34210,AT1G15140,AT1G15410,AT1G15110,AT1G13930,AT1G06640,AT1G14250,AT1G75830,AT1G62780,AT1G76020,AT1G16220,AT1G43560,AT1G28610,AT1G10830,AT1G11720,AT1G11750,AT1G14810,AT1G64770,AT1G64900,AT1G79410,AT1G79510,AT1G54290,AT1G54220,AT1G75690,AT1G78560,AT1G54040,AT1G05560,AT1G10585,AT1G10580,AT2G16510,AT2G36145,AT2G15290,AT2G20480,AT2G04039,AT2G22250,AT2G28600,AT2G31790,AT2G04030,AT2G42600,AT1G04290,AT1G09340,AT1G04420,AT1G26840,AT1G31120,AT1G31190,AT2G21330,AT2G21385,AT2G46340,AT2G40435,AT2G36950,AT2G21870,AT2G21970,AT2G21960,AT2G36380,AT2G35860,AT2G35960,AT2G42770,AT2G21210,AT2G28550,AT2G28000,AT1G09200,AT1G62045,AT1G70300,AT1G03220,AT1G03250,AT1G11840,AT2G25180,AT1G11860,AT1G04710,AT1G09130,AT1G09780,AT1G62200,AT1G62180,AT1G24280,AT1G23190,AT1G77090,AT1G67250,AT1G27130,AT1G24625,AT1G61580,AT1G52040,AT1G55480,AT1G55490,AT1G03495,AT1G62660,AT1G23740,AT2G07707,AT2G43020,AT2G20270,AT2G20340,AT2G15620,AT2G15490,AT2G27230,AT2G27360,AT2G27510,AT2G24500,AT2G25610,AT2G19650,AT2G37860,AT2G28190,AT2G38870,AT2G38940,AT2G27680,AT2G27820,AT2G29490,AT2G26980,AT2G41290,AT2G47840,AT2G31170,AT2G31070,AT2G47880,AT2G24050,AT2G35480,AT2G29730,AT2G25830,AT2G29650,AT2G26900,AT2G26870,AT2G26930,AT2G44650,AT2G26080,AT2G39470,AT2G39310,AT2G39330,AT2G34460,AT2G39250,AT2G30970,AT2G31040,AT2G37580,AT2G30950,AT2G02500,AT2G43920,AT2G44040,AT2G23000,AT2G23670,AT2G30100,AT2G34720,AT2G44310,AT2G34810,AT2G34860,AT2G30390,AT2G30540,AT2G32640,AT2G42080,AT2G32990,AT2G26660,AT2G42130,AT5G59610,AT1G31180,AT1G27385 JENSEN_NONE/BGH-COL_UP Up-regulated by NONE vs BGH col (Table 2 PubmedID:18694460) AT3G49620,AT4G18250,AT1G15520,AT2G15390,AT2G23300,AT2G40890,AT4G17260,AT4G15940,AT4G15490,AT4G15120,AT4G15620,AT4G15920,AT4G14230,AT4G14090,AT5G04160,AT1G73330,AT5G13550,AT5G28530,AT5G13110,AT5G19440,AT5G20080,AT4G36400,AT3G44830,AT5G16080,AT5G27760,AT5G27380,AT5G67480,AT5G66440,AT5G65660,AT5G64230,AT5G61780,AT5G61570,AT5G59910,AT5G60040,AT5G59515,AT5G57950,AT5G57290,AT5G57410,AT5G54900,AT5G54500,AT5G53460,AT5G53470,AT5G53000,AT5G52570,AT5G52060,AT5G51460,AT5G51060,AT5G50210,AT5G47560,AT5G46740,AT5G46560,AT5G44380,AT5G43980,AT5G43970,AT5G43140,AT5G43260,AT5G42890,AT5G41670,AT5G40580,AT5G40460,AT5G39320,AT5G38530,AT5G35620,AT5G24160,AT5G22300,AT5G18790,AT5G17280,AT5G16450,AT5G13420,AT5G13750,AT5G13040,AT5G13280,AT5G13360,AT5G12160,AT5G12170,AT5G12190,AT5G11520,AT5G10830,AT5G07000,AT5G05470,AT5G04590,AT5G03490,AT5G02590,AT5G02270,AT5G02430,AT5G01410,AT3G62810,AT3G59840,AT3G59140,AT3G57020,AT3G55110,AT3G54110,AT3G53900,AT3G53890,AT3G53650,AT3G53180,AT3G52390,AT3G51090,AT3G51620,AT3G50520,AT3G46670,AT3G44450,AT4G39990,AT4G39180,AT4G38710,AT4G37410,AT4G36220,AT4G34950,AT4G34590,AT4G34210,AT4G34200,AT4G34230,AT4G33520,AT4G33540,AT4G30460,AT4G29700,AT4G28330,AT4G27460,AT4G27570,AT4G26950,AT4G24830,AT4G24350,AT4G24340,AT4G22960,AT4G21990,AT4G19400,AT4G13890,AT4G13410,AT4G11120,AT4G10810,AT4G05390,AT4G04610,AT4G04870,AT4G02940,AT4G00440,AT1G19670,AT1G07260,AT3G12510,AT1G66620,AT3G22200,AT3G23990,AT3G13470,AT3G19590,AT3G19210,AT3G15352,AT3G27190,AT3G13110,AT3G24150,AT3G24170,orf101b,AT3G16330,AT3G17120,AT3G18100,AT3G17790,AT3G23390,AT3G23410,AT3G16630,AT3G06700,AT3G09720,AT3G09480,AT3G11900,AT3G04000,AT3G10050,AT3G01410,AT3G01120,AT3G16390,AT3G16470,AT1G27960,AT1G52280,AT1G77450,AT1G77670,AT1G76690,AT1G73790,AT1G63220,AT1G67570,AT1G80560,AT1G74030,AT2G41730,AT2G47260,AT2G43580,AT1G55920,AT1G29050,AT1G29130,AT1G26770,AT1G21070,AT1G28390,AT1G50140,AT1G08250,AT1G30510,AT1G11580,AT1G22380,AT1G02850,AT1G64200,AT1G31340,AT1G34210,AT1G15110,AT1G75830,AT1G16220,AT1G14810,AT1G79410,AT1G05560,AT1G10585,AT1G10580,AT2G20480,AT2G22250,AT2G28600,AT1G26840,AT1G31120,AT2G40435,AT2G36950,AT2G21870,AT2G36380,AT1G09200,AT1G62045,AT1G70300,AT1G03220,AT1G03250,AT2G25180,AT1G09780,AT1G62200,AT1G62180,AT1G67250,AT1G27130,AT1G61580,AT1G03495,AT2G07707,AT2G43020,AT2G15490,AT2G27230,AT2G27360,AT2G27510,AT2G24500,AT2G38870,AT2G38940,AT2G27820,AT2G29490,AT2G26980,AT2G47880,AT2G24050,AT2G35480,AT2G39310,AT2G37580,AT2G34720,AT2G44310,AT2G30540,AT2G42080,AT2G26660,AT1G32130,AT1G32230,AT5G66630,AT5G66250,AT5G62680,AT5G60280,AT5G49760,AT5G47850,AT5G39760,AT5G11000,AT5G10740,AT5G02290,AT3G57550,AT3G48140,AT4G39950,AT4G27320,AT4G26060,AT4G21120,AT4G12040,AT4G01750,AT1G25390,AT3G02340,AT1G72060,AT3G26470,AT3G20250,AT3G05840,AT1G15790,AT1G67980,AT1G62420,AT1G49050,AT2G17120,AT1G67520,AT2G02350,AT2G44180,AT2G26190,AT5G05560,AT1G21170 JENSEN_NONE/BGH-COL_DN Down-regulated by NONE vs BGH col (Table 2 PubmedID:18694460) AT1G23360,AT5G03720,AT4G31240,AT2G40316,AT2G42870,AT2G39730,AT2G40935,AT2G41680,AT2G47590,AT1G44575,AT4G15440,AT4G16155,AT4G15110,AT1G25290,AT5G04140,AT1G51080,AT1G51110,AT1G51115,AT1G32220,AT1G26230,AT1G26220,AT5G13120,AT5G20070,AT4G36530,AT4G37040,AT1G31800,AT3G51820,AT3G44890,AT1G57770,AT5G16710,AT5G17050,AT5G16010,AT5G16715,AT1G31690,AT5G35170,AT5G27560,AT5G27290,AT5G67150,AT5G66530,AT5G65010,AT5G64580,AT5G63310,AT5G62840,AT5G62720,AT5G62140,AT5G58330,AT5G58310,AT5G58260,AT5G55220,AT5G49030,AT5G45930,AT5G43750,AT5G42270,AT5G40850,AT5G40830,AT5G39830,AT5G37260,AT5G37360,AT5G36700,AT5G35630,AT5G35490,AT5G24300,AT5G22620,AT5G19220,AT5G18660,AT5G17310,AT5G14660,AT5G14570,AT5G13650,AT5G12860,AT5G10470,AT5G08650,AT5G07590,AT5G07690,AT5G07020,AT5G06340,AT5G04900,AT5G05200,AT5G03650,AT5G03555,AT5G01790,AT3G63410,AT3G63140,AT3G62910,AT3G62030,AT3G61220,AT3G61080,AT3G61100,AT3G57180,AT3G55800,AT3G54900,AT3G54050,AT3G53130,AT3G52960,AT3G49680,AT3G48420,AT3G47650,AT3G44620,AT4G39710,AT4G39800,AT4G39970,AT4G39730,AT4G38970,AT4G37980,AT4G38370,AT4G38320,AT4G35250,AT4G34490,AT4G33660,AT4G33680,AT4G33960,AT4G33470,AT4G33700,AT4G33010,AT4G32590,AT4G32320,AT4G30810,AT4G29590,AT4G28660,AT4G28030,AT4G26850,AT4G27030,AT4G25700,AT4G25460,AT4G25450,AT4G24930,AT4G24620,AT4G22890,AT4G21210,AT4G20760,AT4G20070,AT4G19985,AT4G19120,AT4G18810,AT4G18820,AT4G13670,AT4G12830,AT4G12310,AT4G04640,AT4G04330,AT4G02530,AT4G01690,AT4G01895,AT4G01080,AT4G00430,AT4G00050,AT1G32080,AT4G10300,AT1G07010,AT1G18060,AT1G20810,AT1G56190,AT3G10940,AT1G32550,AT1G75210,AT3G14770,AT3G18890,AT3G52380,AT3G52230,AT3G15110,AT3G23820,AT3G19710,AT3G24430,AT3G26570,AT3G10840,AT3G25710,AT3G27060,AT3G13040,AT3G21750,AT3G21760,AT3G20790,AT3G16250,AT3G21670,AT3G15360,AT3G16560,AT3G02450,AT3G06510,AT3G02730,AT3G02870,AT3G08740,AT3G11950,AT3G03250,AT3G04790,AT3G01660,AT3G01480,AT3G07670,AT3G01060,AT1G56500,AT1G42970,AT1G56505,AT1G77490,AT1G64390,AT1G29530,AT1G52220,AT1G73600,AT1G71500,AT1G74160,AT1G78180,AT1G68540,AT1G80380,AT1G70610,AT1G10960,AT2G43550,AT2G43710,AT1G53240,AT1G32470,AT1G48030,AT1G78370,AT1G43670,AT1G21350,AT1G02560,AT1G02475,AT1G06040,AT1G12250,AT1G12800,AT1G20020,AT1G48520,AT1G48600,AT1G53090,AT1G14270,AT1G01790,AT1G63610,AT1G49650,AT1G27700,AT1G76080,AT1G15980,AT1G16080,AT1G50450,AT1G11440,AT1G64680,AT1G64500,AT1G56050,AT1G02910,AT1G52510,AT1G74730,AT1G68660,AT1G64150,AT1G11280,AT1G50250,AT1G17100,AT1G13930,AT1G62780,AT1G76020,AT1G43560,AT1G28610,AT1G11720,AT1G11750,AT1G64770,AT1G79510,AT1G54290,AT1G75690,AT1G78560,AT1G54040,AT2G36145,AT2G04039,AT2G31790,AT2G42600,AT1G09340,AT1G04420,AT1G31190,AT2G21330,AT2G21385,AT2G46340,AT2G21970,AT2G21960,AT2G35860,AT2G35960,AT2G42770,AT2G21210,AT2G28550,AT2G28000,AT1G11860,AT1G77090,AT1G55480,AT1G23740,AT2G20270,AT2G20340,AT2G15620,AT2G25610,AT2G19650,AT2G37860,AT2G27680,AT2G41290,AT2G31170,AT2G31070,AT2G25830,AT2G29650,AT2G26870,AT2G26930,AT2G26080,AT2G39470,AT2G34460,AT2G31040,AT2G30950,AT2G02500,AT2G43920,AT2G23000,AT2G23670,AT2G34860,AT2G30390,AT2G32640,AT4G16190,AT4G15780,AT1G28330,AT5G22000,AT5G08380,AT5G19940,AT4G36730,AT4G36520,AT5G15440,AT5G25560,AT5G04880,AT5G64500,AT5G64410,AT5G63910,AT5G63800,AT5G63210,AT5G63190,AT5G61380,AT5G58200,AT5G57550,AT5G57940,AT5G57655,AT5G54270,AT5G54680,AT5G54080,AT5G53870,AT5G53170,AT5G52820,AT5G47890,AT5G46330,AT5G42900,AT5G42030,AT5G41700,AT5G40910,AT5G40690,AT5G37540,AT5G23020,AT5G19140,AT5G18630,AT5G12210,AT5G10960,AT5G10810,AT5G10860,AT5G10380,AT5G07820,AT5G06240,AT5G04490,AT5G03240,AT5G03050,AT5G02150,AT3G62290,AT3G62130,AT3G62190,AT3G61260,AT3G61670,AT3G60340,AT3G55770,AT3G54890,AT3G54790,AT3G54190,AT3G53310,AT3G51000,AT3G50830,AT3G50000,AT3G48530,AT3G48750,AT3G47590,AT3G47470,AT3G47000,AT3G47010,AT3G45860,AT3G45310,AT3G42630,AT3G42790,AT4G37470,AT4G37820,AT4G35780,AT4G32050,AT4G28270,AT4G27880,AT4G27130,AT4G25500,AT4G23240,AT4G22720,AT4G21810,AT4G21180,AT4G20380,AT4G19170,AT4G18130,AT4G13810,AT4G12570,AT4G09760,AT4G10050,AT4G08330,AT4G05150,AT4G01610,AT4G01130,AT4G01120,AT4G00720,AT4G00150,AT1G66970,AT1G33990,AT1G34150,AT1G58360,AT1G13560,AT1G30360,AT1G66180,AT3G19000,AT3G13560,AT3G20120,AT2G33990,AT3G26580,AT3G26220,AT3G26230,AT3G20420,AT3G23110,AT3G13062,AT3G19515,AT3G23640,AT3G16770,AT3G05760,AT3G10770,AT3G03390,AT3G07520,AT3G02130,AT3G03870,AT1G52290,AT1G29395,AT1G72150,AT1G68110,AT1G67580,AT1G70620,AT1G63800,AT1G63900,AT1G53280,AT1G19340,AT1G19330,AT1G06110,AT1G01240,AT1G12780,AT1G20050,AT1G48550,AT1G08460,AT1G11360,AT1G56150,AT1G27520,AT1G64230,AT1G11260,AT1G21770,AT1G16260,AT1G28580,AT1G13090,AT1G14790,AT1G59900,AT1G65790,AT1G75750,AT1G54440,AT1G54360,AT2G31810,AT2G31870,AT2G17040,AT2G04690,AT2G22450,AT1G54730,AT1G22640,AT1G11930,AT1G10210,AT1G04550,AT1G62290,AT1G03610,AT1G61520,AT2G42890,AT2G18280,AT2G46550,AT2G15960,AT2G32080,AT2G24390,AT2G24160,AT2G02410,AT2G28830,AT2G07180,AT2G46260,AT2G46220,AT2G46900,AT2G29020,AT2G45820,AT2G34430,AT2G34300,AT2G41080,AT2G37540,AT2G31000,AT2G43970,AT2G39940,AT2G02760,AT1G31180,AT5G47900,AT5G24650,AT1G12730,AT3G18870,AT1G20870,AT2G16250,AT1G23205,AT2G43100,AT2G32500 JENSEN_NONE/BGH-ATAF_UP Up-regulated by NONE vs BGH ataf (Table 2 PubmedID:18694460) AT3G49620,AT3G50210,AT4G18250,AT1G15520,AT2G15390,AT4G17260,AT4G15940,AT4G15490,AT4G15920,AT4G14230,AT5G13550,AT5G13110,AT5G19440,AT3G44830,AT5G27760,AT5G27380,AT5G67480,AT5G65660,AT5G61780,AT5G59515,AT5G57290,AT5G54500,AT5G53470,AT5G53000,AT5G51060,AT5G47560,AT5G46560,AT5G40460,AT5G39320,AT5G38530,AT5G35620,AT5G24160,AT5G22300,AT5G17280,AT5G16450,AT5G13420,AT5G13750,AT5G13040,AT5G13280,AT5G12160,AT5G12170,AT5G11520,AT5G10830,AT5G07000,AT5G05470,AT5G04590,AT5G03490,AT5G02590,AT5G02270,AT5G02430,AT5G01410,AT3G54110,AT3G53180,AT3G51090,AT3G51620,AT4G39990,AT4G38710,AT4G36220,AT4G34590,AT4G34200,AT4G34230,AT4G33540,AT4G27460,AT4G24830,AT4G24350,AT4G24340,AT4G21990,AT4G19400,AT4G05390,AT4G04610,AT4G02940,AT1G19670,AT1G07260,AT3G12510,AT1G66620,AT3G23990,AT3G15352,AT3G13110,AT3G24170,AT3G16330,AT3G18100,AT3G17790,AT3G09480,AT3G11900,AT3G10050,AT3G01120,AT1G27960,AT1G77450,AT1G77670,AT1G76690,AT1G63220,AT1G80560,AT2G41730,AT2G43580,AT1G55920,AT1G29050,AT1G29130,AT1G08250,AT1G11580,AT1G02850,AT1G15110,AT1G16220,AT1G10580,AT2G22250,AT2G36380,AT1G70300,AT1G03220,AT1G03250,AT1G62200,AT1G27130,AT1G03495,AT2G43020,AT2G15490,AT2G27510,AT2G24500,AT2G38870,AT2G38940,AT2G26660,AT4G14640,AT4G16700,AT4G16960,AT5G22000,AT1G32130,AT1G32230,AT5G09290,AT1G51850,AT5G16880,AT5G35080,AT5G27920,AT5G26731,AT5G66630,AT5G66250,AT5G63030,AT5G62680,AT5G61060,AT5G61250,AT5G60280,AT5G60590,AT5G59680,AT5G53650,AT5G53550,AT5G52740,AT5G49760,AT5G47850,AT5G46500,AT5G46295,AT5G40690,AT5G40230,AT5G39760,AT5G38650,AT5G37540,AT5G18780,AT5G11920,AT5G11000,AT5G10740,AT5G10610,AT5G10380,AT5G07340,AT5G06820,AT5G05320,AT5G02290,AT3G63500,AT3G62290,AT3G60180,AT3G57550,AT3G57360,AT3G55450,AT3G51920,AT3G50920,AT3G50000,AT3G50140,AT3G49340,AT3G48140,AT3G47340,AT3G45860,AT4G39950,AT4G34480,AT4G30640,AT4G27320,AT4G26060,AT4G23240,AT4G23310,AT4G21980,AT4G21120,AT4G13820,AT4G13030,AT4G12040,AT4G11300,AT4G07820,AT4G04510,AT4G01750,AT4G01610,AT1G25390,AT1G66960,AT1G20350,AT1G58300,AT3G02340,AT1G72060,AT3G11010,AT3G28510,AT3G28540,AT3G13710,AT3G26470,AT3G22460,AT3G25010,AT3G20250,AT1G43000,AT3G24900,AT3G24954,AT3G26220,AT3G23110,AT3G29250,AT3G27010,AT3G14280,AT3G02770,AT3G05840,AT3G04060,AT3G07520,AT3G03870,AT1G15790,AT1G12290,AT1G21310,AT1G21270,AT1G74170,AT1G67980,AT1G29970,AT1G74440,AT1G69720,AT1G62420,AT1G49050,AT1G21390,AT1G02470,AT1G26410,AT1G53100,AT1G08450,AT1G11310,AT1G11260,AT1G62810,AT1G14740,AT1G79380,AT1G54210,AT1G54360,AT1G05570,AT2G31870,AT2G31880,AT2G27150,AT2G17120,AT2G17040,AT2G42790,AT1G67520,AT1G43130,AT1G61460,AT1G30960,AT2G22660,AT2G15880,AT2G25520,AT2G25440,AT2G24160,AT2G28840,AT2G02350,AT2G44180,AT2G26190,AT1G21170 JENSEN_NONE/BGH-ATAF_DN Down-regulated by NONE vs BGH ataf (Table 2 PubmedID:18694460) AT1G23360,AT2G40316,rpoC2,rbcL,mATK,AT2G39730,AT2G40935,AT2G41680,AT2G47590,AT5G12470,AT1G44575,AT4G15440,AT4G16155,AT4G17300,AT4G17470,AT4G15620,AT4G15110,AT1G25290,AT5G04140,AT1G51080,AT1G51110,AT1G51115,AT1G32220,AT1G26230,AT1G26220,AT5G24780,AT5G28530,AT5G13120,AT5G20070,AT5G19855,AT4G36530,AT4G37040,AT1G31800,AT3G51820,AT3G44890,AT1G57770,AT5G16710,AT5G16970,AT5G17050,AT5G16010,AT5G16715,AT1G31690,AT5G35170,AT5G27560,AT5G27290,AT5G04830,AT5G67070,AT5G67150,AT5G66530,AT5G65890,AT5G65020,AT5G65010,AT5G64580,AT5G63310,AT5G62840,AT5G62720,AT5G62220,AT5G62140,AT5G61570,AT5G60540,AT5G59870,AT5G59910,AT5G59770,AT5G59690,AT5G58330,AT5G58310,AT5G58260,AT5G55220,AT5G53920,AT5G52110,AT5G51460,AT5G51100,AT5G49940,AT5G50110,AT5G48880,AT5G49030,AT5G48300,AT5G48470,AT5G46290,AT5G45930,AT5G43750,AT5G43260,AT5G42720,AT5G42270,AT5G40850,AT5G40830,AT5G40160,AT5G39830,AT5G37260,AT5G37360,AT5G36700,AT5G35630,AT5G35490,AT5G24300,AT5G22620,AT5G22880,AT5G19220,AT5G18550,AT5G18660,AT5G17310,AT5G14660,AT5G14570,AT5G13650,AT5G12860,AT5G10470,AT5G10390,AT5G10170,AT5G08650,AT5G07590,AT5G07690,AT5G07020,AT5G06340,AT5G05860,AT5G04900,AT5G05200,AT5G03650,AT5G03555,AT5G02940,AT5G01790,AT3G63410,AT3G63140,AT3G62910,AT3G62460,AT3G61770,AT3G62030,AT3G61220,AT3G61080,AT3G61100,AT3G59840,AT3G57180,AT3G56980,AT3G55800,AT3G55310,AT3G54900,AT3G54750,AT3G54050,AT3G53900,AT3G53560,AT3G53130,AT3G52960,AT3G50520,AT3G49680,AT3G48690,AT3G48420,AT3G47650,AT3G46940,AT3G44620,AT4G39710,AT4G39800,AT4G39970,AT4G39730,AT4G39350,AT4G38970,AT4G37980,AT4G38370,AT4G37540,AT4G38320,AT4G35250,AT4G34490,AT4G33660,AT4G33680,AT4G33960,AT4G33470,AT4G33700,AT4G33010,AT4G32590,AT4G32320,AT4G30810,AT4G29590,AT4G29130,AT4G28660,AT4G28030,AT4G26850,AT4G27030,AT4G25700,AT4G25460,AT4G25450,AT4G25130,AT4G24930,AT4G24620,AT4G24280,AT4G22890,AT4G22830,AT4G22753,AT4G21210,AT4G20750,AT4G20760,AT4G20070,AT4G19985,AT4G19120,AT4G18810,AT4G18820,AT4G13670,AT4G13890,AT4G12830,AT4G12310,AT4G12060,AT4G04640,AT4G04870,AT4G04330,AT4G03400,AT4G02530,AT4G01690,AT4G01895,AT4G01080,AT4G00440,AT4G00430,AT4G00050,AT1G32080,AT4G10300,AT1G18040,AT1G07010,AT1G18060,AT1G20810,AT1G56190,AT3G11170,AT3G10940,AT1G32550,AT1G75210,AT3G14770,AT3G18890,AT3G52370,AT3G52380,AT3G52230,AT3G27180,AT3G15110,AT3G23940,AT3G23820,AT3G13470,AT3G19710,AT3G19170,AT3G24430,AT3G23810,AT3G24150,AT3G26570,AT3G10840,AT3G25710,AT3G27060,AT3G13040,AT3G25470,AT3G21750,AT3G21760,AT3G20790,AT3G16250,AT3G14570,AT3G21670,AT3G13930,AT3G14390,AT3G15360,AT3G16560,AT3G02570,AT3G02450,AT3G06510,AT3G06680,AT3G04520,AT3G02730,AT3G02870,AT3G08740,AT3G09540,AT3G05800,AT3G11950,AT3G03250,AT3G05730,AT3G05590,AT3G04790,AT3G01660,AT3G01480,AT3G07670,AT3G01060,AT1G19140,AT1G56500,AT1G52410,AT1G42970,AT1G56505,AT1G77490,AT1G64390,AT1G29530,AT1G47900,AT1G52220,AT1G73600,AT1G76380,AT1G71500,AT1G74160,AT1G78180,AT1G33940,AT1G68540,AT1G80380,AT1G70610,AT1G63940,AT1G69830,AT1G10960,AT2G43550,AT2G43710,AT2G43760,AT1G53240,AT1G32470,AT1G32500,AT1G48030,AT1G78370,AT1G43710,AT1G43670,AT1G21350,AT1G02560,AT1G02475,AT1G06040,AT1G12250,AT1G32860,AT1G12800,AT1G20020,AT1G26770,AT1G48520,AT1G48600,AT1G53090,AT1G07790,AT1G21070,AT1G14270,AT1G01790,AT1G63610,AT1G49650,AT1G27700,AT1G18440,AT1G76080,AT1G15550,AT1G15980,AT1G16080,AT1G30510,AT1G08280,AT1G50450,AT1G11440,AT1G64680,AT1G64500,AT1G56050,AT1G02910,AT1G52510,AT1G74730,AT1G68660,AT1G64150,AT1G11280,AT1G50250,AT1G17090,AT1G17100,AT1G15140,AT1G15410,AT1G13930,AT1G14250,AT1G62780,AT1G76020,AT1G43560,AT1G28610,AT1G10830,AT1G11720,AT1G11750,AT1G64770,AT1G64900,AT1G79510,AT1G54290,AT1G54220,AT1G75690,AT1G78560,AT1G54040,AT2G16510,AT2G36145,AT2G15290,AT2G04039,AT2G31790,AT2G04030,AT2G42600,AT1G04290,AT1G09340,AT1G04420,AT1G31190,AT2G21330,AT2G21385,AT2G46340,AT2G21970,AT2G21960,AT2G35860,AT2G35960,AT2G42770,AT2G21210,AT2G28550,AT2G28000,AT1G09200,AT1G11840,AT1G11860,AT1G04710,AT1G09130,AT1G62180,AT1G24280,AT1G23190,AT1G77090,AT1G24625,AT1G55480,AT1G55490,AT1G62660,AT1G23740,AT2G20270,AT2G20340,AT2G15620,AT2G27230,AT2G25610,AT2G19650,AT2G37860,AT2G27680,AT2G26980,AT2G41290,AT2G47840,AT2G31170,AT2G31070,AT2G24050,AT2G25830,AT2G29650,AT2G26900,AT2G26870,AT2G26930,AT2G44650,AT2G26080,AT2G39470,AT2G34460,AT2G39250,AT2G30970,AT2G31040,AT2G30950,AT2G02500,AT2G43920,AT2G44040,AT2G23000,AT2G23670,AT2G44310,AT2G34860,AT2G30390,AT2G32640,AT2G32990,AT2G42130,AT4G16190,AT4G15780,AT5G19940,AT4G36730,AT5G15440,AT5G25560,AT5G04880,AT5G64500,AT5G64410,AT5G63800,AT5G63210,AT5G63190,AT5G58200,AT5G57940,AT5G54270,AT5G53170,AT5G42900,AT5G42030,AT5G23020,AT5G19140,AT5G12210,AT5G06240,AT5G04490,AT5G03240,AT5G03050,AT3G62130,AT3G62190,AT3G61260,AT3G60340,AT3G55770,AT3G54890,AT3G54790,AT3G50830,AT3G48750,AT3G47470,AT3G47010,AT3G45310,AT4G37470,AT4G35780,AT4G32050,AT4G28270,AT4G27130,AT4G25500,AT4G19170,AT4G18130,AT4G09760,AT4G05150,AT4G01130,AT4G01120,AT4G00720,AT4G00150,AT1G33990,AT1G58360,AT1G13560,AT1G30360,AT3G19000,AT3G13560,AT3G20120,AT2G33990,AT3G26580,AT3G13062,AT3G19515,AT3G23640,AT3G10770,AT3G03390,AT1G29395,AT1G72150,AT1G68110,AT1G70620,AT1G63800,AT1G19340,AT1G19330,AT1G06110,AT1G20050,AT1G48550,AT1G27520,AT1G64230,AT1G13090,AT1G75750,AT2G04690,AT2G22450,AT1G54730,AT1G22640,AT1G04550,AT1G62290,AT1G61520,AT2G18280,AT2G46550,AT2G15960,AT2G32080,AT2G24390,AT2G02410,AT2G07180,AT2G29020,AT2G45820,AT2G34430,AT2G34300,AT2G41080,AT2G37540,AT2G39940,AT5G59610,AT1G31180,AT1G27385,AT5G25580,AT5G47900,AT5G47440,AT5G24650,AT5G09730,AT3G53140,AT4G34140,AT1G12730,AT3G18870,AT1G20870,AT2G16250,AT1G23205,AT2G43100,AT2G32500,AT4G04410 ROWAN_35S-PAP1-D2/D1_LEAVES_GH-EMPERATURE_LOW-LIGHT_UP Up-regulated-in expression of anthocyanin and flavonol biosynthetic genes in 35S:PAP1 (ratio day 2/day 1) and control leaves of Arabidopsis thaliana Columbia in response to gh-emperature low-light (HTLL; days 2 and 7) conditions and after return to initial low-temperature highlight. (LTHL) conditions (days 1 and 8). (Table 2 PubmedID:19192188) AT3G47340,AT4G30270,AT5G20250,AT1G75750,AT2G47180 ROWAN_35S-PAP1-D2/D1_LEAVES_GH-EMPERATURE_LOW-LIGHT_DN Down-regulated-in expression of anthocyanin and flavonol biosynthetic genes in 35S:PAP1 (ratio day 2/day 1) and control leaves of Arabidopsis thaliana Columbia in response to gh-emperature low-light (HTLL; days 2 and 7) conditions and after return to initial low-temperature highlight. (LTHL) conditions (days 1 and 8). (Table 2 PubmedID:19192188) AT5G07990,AT3G21560,AT5G05270,AT5G45890,AT4G14090,AT3G51240,AT1G02940,AT5G13930,AT3G29590,AT5G42800,AT2G37040 ROWAN_35S-PAP1-D8/D7_LEAVES_GH-EMPERATURE_LOW-LIGHT_UP Up-regulated-in expression of anthocyanin and flavonol biosynthetic genes in 35S:PAP1 (ratio day 8/day 7) and control leaves of Arabidopsis thaliana Columbia in response to gh-emperature low-light (HTLL; days 2 and 7) conditions and after return to initial low-temperature highlight. (LTHL) conditions (days 1 and 8). (Table 2 PubmedID:19192188) AT1G66390,AT5G07990,AT3G21560,AT3G51240,AT1G02940,AT5G05270,AT2G37040,AT5G13930 ROWAN_35S-PAP1-D8/D7_LEAVES_GH-EMPERATURE_LOW-LIGHT_DN Down-regulated-in expression of anthocyanin and flavonol biosynthetic genes in 35S:PAP1 (ratio day 8/day 7) and control leaves of Arabidopsis thaliana Columbia in response to gh-emperature low-light (HTLL; days 2 and 7) conditions and after return to initial low-temperature highlight. (LTHL) conditions (days 1 and 8). (Table 2 PubmedID:19192188) AT5G20250,AT1G75750,AT4G30270,AT3G47340,AT2G47180 CHANDRAN_WT-T2_UP Up-regulated-WT T2 (Worksheet S1 PubmedID:19176722) AT1G26380,AT3G22600,AT3G18250,AT2G30770,AT1G78410,AT1G51890,AT4G23810,AT4G21830,AT2G29460,AT2G29350,AT5G64000,AT1G21240,AT5G20230,AT1G65690,AT4G00700,AT2G43570,AT4G16260,AT4G12500,AT2G30750,AT1G75040,AT4G12490,AT2G19190,AT5G27420,AT2G23170,AT1G67920,AT4G10500,AT5G38900,AT1G66960,AT2G43000,AT4G27260,AT1G57630,AT5G53110,AT2G44240,AT1G51920,AT5G50200,AT1G74590,AT1G19020,AT3G51330,AT4G04490,AT2G38870,AT1G74360,AT2G30140,AT4G02380,AT4G23310,AT5G53870,AT1G26420,AT2G13810,AT1G22890,AT1G65500,AT5G26920,AT3G49780,AT4G18250,AT4G35180,AT2G47800,AT4G37370,AT2G40670,AT4G23150,AT5G52740,AT1G35230,AT3G13950,AT1G08050,AT5G48540,AT3G47480,AT5G18470,AT1G74710,AT1G24140,AT1G20190,AT2G18690,AT2G18660,AT1G27730,AT5G10380,AT4G01720,AT3G26830,AT4G20000,AT1G32940,AT2G32680,AT1G15670,AT4G35110,AT2G29110,AT4G34135,AT5G24110,AT1G66690,AT3G58120,AT1G01120,AT3G04720,AT3G54150,AT4G28390,AT3G28540,AT1G13340,AT1G21310,AT3G55950,AT1G55260,AT5G22570,AT3G24900,AT2G18680,AT1G45145,AT5G20790,AT3G13790,AT5G55420,AT5G28540,AT3G14280,AT4G21850,AT2G39200,AT3G51440,AT2G02100,AT5G65730,AT1G12290,AT2G14610,AT4G17500,AT2G41410,AT3G28510,AT3G12830,AT4G13900,AT4G38540,AT1G79680,AT3G25010,AT1G62300,AT4G10960,AT3G02040,AT5G57220,AT1G55330,AT3G57260,AT3G54400,AT3G51860,AT5G01015,AT5G51770,AT4G12420,AT5G24530,AT3G25610,AT3G43720,AT1G51860,AT1G79450,AT1G08450,AT1G63840,AT4G14440,AT4G04500,AT4G04220,AT3G55980,AT4G20860,AT1G80840,AT2G32800,AT3G08720,AT4G37800,AT4G02330,AT3G05640,AT4G23190,AT4G39950,AT5G58310,AT5G20960,AT4G23140,AT1G18380,AT2G30550,AT1G27950,AT4G20110,AT1G51800,AT5G20400,AT1G27030,AT4G24510,AT4G12480,AT1G66090,AT4G39830,AT5G39210,AT3G49260,AT2G29120,AT3G52430,AT5G52810,AT5G54490,AT5G25260,AT4G33490,AT5G38710,AT1G17745,AT1G75170,AT3G04640,AT5G39050,AT5G46050,AT1G29500,AT4G22530,AT3G62600,AT1G18890,AT1G52200,AT4G29520,AT3G26210,AT1G28480,AT2G18050,AT1G67850,AT5G58940,AT3G09940,AT1G61420,AT3G05800,AT3G01290,AT1G33030,AT4G17670,AT3G13750,AT4G31800,AT5G13320,AT3G09010,AT1G76970,AT5G45950,AT4G03450,AT5G52760,AT4G14365,AT3G14470,AT5G08240,AT1G30900,AT2G41100,AT5G39670,AT2G39400,AT4G27280,AT1G24150,AT3G29030,AT1G29660,AT1G64400,AT1G30520,AT5G10760,AT2G39210,AT1G20070,AT2G04450,AT5G25930,AT2G46710,AT3G44720,AT4G15610,AT3G26220,AT4G14630,AT1G60730,AT3G26440,AT1G72280,AT3G44990,AT3G50480,AT5G62920,AT1G09970,AT1G02360,AT3G07010,AT5G02490,AT5G51830,AT5G66590,AT5G42050,AT1G21110,AT3G13520,AT5G67340,AT5G52910,AT1G55490,AT4G04540,AT5G44680,AT5G63680,AT4G19370,AT5G50740,AT3G27160,AT5G19240,AT4G16985,AT2G17720,AT4G34260,AT4G23885,AT2G03420,AT1G47890,AT5G05300,AT5G13460,AT2G37640,AT2G42360,AT5G50730,AT2G39660,AT5G61790,AT1G72680,AT2G12290,AT3G55470,AT5G13730,AT2G17290,AT3G45290,AT5G60280,AT5G42830,AT2G46600,AT1G20350,AT1G02850,AT4G39270,AT5G52860,AT4G11890,AT5G12930,AT5G38240,AT5G02890,AT1G68620,AT5G47190,AT1G26390,AT4G18430,AT5G47220,AT1G19050,AT1G70690,AT1G72900,AT5G20150,AT1G06830,AT2G29310,AT4G25110,AT1G73800,AT1G01560,AT5G52900,AT1G76790,AT1G67750,AT5G55450,AT4G36640,AT4G01130,AT5G62480,AT3G49120,AT2G29290,AT3G54420,AT2G44740,AT3G19850,AT1G64360,AT1G09740,AT3G51430,AT4G28490,AT1G29395,AT1G14150,AT3G57550,AT3G22160,AT1G17650,AT2G47130,AT3G09410,AT2G15480,AT3G54960,AT1G18570,AT3G06070,AT4G05020,AT1G75690,AT4G11280,AT3G29240,AT3G10080,AT2G26690,AT3G52750,AT1G78995,AT1G62840,AT1G51115,AT5G19875,AT2G31990,AT2G47240,AT5G44530,AT5G27600,AT3G10720,AT4G23010,AT3G09580,AT4G39330,AT1G26230,AT5G45680,AT1G53870,AT5G52640,AT3G16370,AT1G33811,AT3G52400,AT1G03870,AT1G75960,AT2G45470,AT2G26250,AT3G21520,AT4G32870,AT4G04510,AT2G05790,AT1G03850,AT1G54820,AT2G04100,AT5G16030,AT2G46270,AT3G22150,AT4G13180,AT5G45040,AT3G05630,AT1G55370,AT1G73805,AT1G59590,AT5G24780,AT5G22250,AT2G42540,AT4G12310,AT1G70370,AT1G75900,AT5G63780,AT2G37450,AT1G21500,AT2G35500,AT4G27860,AT5G09290,AT1G05575,AT1G27980,AT1G66430,AT2G21385,AT3G57240,AT3G18890,AT3G07520,AT3G01440,AT5G43750,AT4G20830,AT1G05560,AT2G38470,AT4G36110,AT3G11170,AT5G40780,AT2G43510,AT3G13610,AT3G45850,AT1G29330,AT3G24954,AT2G24850,AT3G51150,AT1G62780,AT3G15850,AT4G05590,AT4G37080,AT1G76960,AT4G26520,AT3G01670,AT1G14370,AT3G12610,AT2G02930,AT3G48650,AT5G46230,AT5G46080,AT4G25900,AT5G41740,AT4G12970,AT1G18650,AT1G56150,AT5G13080,AT3G47420,AT1G78170,AT1G73830,AT5G62620,AT3G53800,AT5G61010,AT4G11370,AT2G18890,AT3G15570,AT1G74970,AT5G13930,AT4G35600,AT1G71880,AT3G45860,AT1G14700,AT1G69040,AT5G05740,AT3G21950,AT1G09560,AT2G02220,AT5G65010,AT4G19880,AT3G62750,AT1G21750,AT1G29430,AT3G23805,AT1G67520,AT3G15680,AT2G45910,AT5G63310,AT1G08550,AT1G09350,AT1G64390,AT2G46150,AT2G29990,AT5G24210,AT3G16530,AT3G50930,AT5G55220,AT4G33220,AT3G18830,AT2G04400,AT2G02370,AT3G01970,AT2G24180,AT2G16850,AT2G28470,AT2G04790,AT4G36990,AT3G55330,AT5G26030,AT1G60600,AT1G71100,AT1G80440,AT2G40400,AT1G51080,AT2G28710,AT1G51780,AT5G43910,AT5G20950,AT3G54950,AT3G06980,AT4G34180,AT1G32540,AT3G12910,AT3G46670,AT2G31880,AT3G21080,AT5G45800,AT4G29050,AT1G64510,AT1G21000,AT1G49380,AT2G01540,AT3G12500,AT5G01610,AT1G14870,AT1G13750,AT2G47930,AT4G33666,AT5G45380,AT1G26410,AT3G60420,AT2G01870,AT2G25440,AT1G74670,AT1G64355,AT4G23320,AT3G48720,AT5G17670,AT5G52970,AT1G17840,AT5G55740,AT3G61080,AT3G08920,AT2G38540,AT1G18620,AT3G19930,AT5G66520,AT4G25030,AT5G15860,AT2G47940,AT1G67360,AT1G01340,AT4G34200,AT3G25660,AT5G21090,AT5G64330,AT1G04680,AT5G12950,AT3G49340,AT3G22060,AT4G22780,AT1G01620,AT2G39420,AT2G28900,AT2G42220,AT1G72700,AT2G33380,AT5G17760,AT3G09540,AT5G57760,AT3G60540,AT4G38850,AT1G20030,AT3G05910,AT3G10500,AT2G37970,AT4G28080,AT1G16920,AT1G60800,AT5G52100,AT4G17560,AT1G07320,AT3G48850,AT3G11010,AT3G63380,AT3G53900,AT2G25000,AT2G40610,AT4G15630,AT1G65010,AT4G12470,AT3G26230,AT1G66880,AT3G09020,AT4G12720,AT4G26120,AT5G09420,AT1G05385,AT5G27290,AT4G34390,AT1G32990,AT2G38860,AT4G39030,AT2G44230,AT4G33660,AT3G28890,AT2G22990,AT1G14360,AT1G76450,AT2G17040,AT2G35020,AT1G71330,AT1G02450,AT4G23480,AT3G19660,AT4G28420,AT3G26710,AT1G22430,AT1G27770,orf111d,AT5G58350,AT1G18390,AT2G39220,AT4G25830,AT2G22860,AT5G18490,AT4G39710,AT1G66150,AT3G07600,AT1G72060,AT4G39890,AT1G15520,AT1G59840,AT5G48900,AT3G14930,AT5G02230,AT1G49000,AT1G21100,AT2G42530,AT2G04460,AT5G53490,AT3G50280,AT5G54600,AT5G14740,AT4G24780,AT4G17460,AT1G33720,AT2G37585,AT4G31790,AT1G13260,AT5G66320,AT3G46620,AT4G02530,AT4G39970,AT5G48790,AT2G04430,AT3G63190,AT1G52800,AT1G35210,AT3G48640,AT4G12980,AT4G25050,AT1G77510,AT2G23810,AT1G77660,AT4G23610,AT2G32030,AT1G70610,AT3G18000,AT5G45930,AT4G32570,AT1G21370,AT4G34220,AT3G50660,AT5G22340,AT5G64380,AT1G51100,AT3G63200,AT1G19250,AT5G18660,AT3G52150,AT3G44890,AT1G09080,AT5G01540,AT2G26560,AT5G23860,AT5G49100,AT5G58260,AT3G56370,AT4G16660,AT4G18930,AT3G15190,AT3G48420,AT1G69420,AT5G65600,AT1G71720,AT1G64405,AT2G35930,AT1G53560,AT1G80050,AT5G12890,AT3G54640,AT4G31590,AT4G24190,AT5G55560,AT2G21210,AT1G77490,AT1G21050,AT1G04420,AT3G55630,AT2G36870,AT5G39860,AT4G17600,AT3G50900,AT1G08540,AT1G07440,AT3G13310,AT5G08330,AT1G60160,AT2G02390,AT3G20820,AT3G24503,AT2G14890,AT5G35790,AT5G23120,AT5G06320,AT4G20870,AT5G23210,AT3G05200,AT1G08930,AT3G21260,AT4G17360,AT3G28290,AT3G16250,AT5G44410,AT4G23300,AT4G00400,AT5G03940,AT1G61380,AT5G49030,AT1G65820,AT3G49370,AT3G48460,AT1G29860,AT1G61360,AT1G05010,AT2G16990,AT2G26190,AT2G29180,AT4G21120,AT5G16590,AT4G30230,AT4G24930,AT5G59820,AT3G46780,AT1G32080,AT2G40475,AT1G34420,AT1G12845,AT3G11650,AT1G64610,AT1G33960,AT1G30620,AT4G17810,AT4G35630,AT4G01010,AT5G01850,AT1G24020,AT4G12830,AT2G39470,AT4G33050,AT3G16720,AT5G66210,AT3G23760,AT5G02760,AT2G46620,AT5G62150,AT5G10690,AT4G37300,AT4G34730,AT3G09050,AT2G18300,AT4G29950,AT5G57170,AT4G01310,AT1G25230,AT1G22590,AT2G24090,AT5G47580,AT5G24090,AT5G62280,AT2G24060,AT2G43620,AT3G53420,AT1G48350,AT3G62910,AT4G27030,AT3G47860,AT5G18310,AT5G15160,AT1G56060,AT5G44520,AT1G67940,AT3G49210,AT3G50440,AT4G21400,AT1G18730,AT2G21850,AT5G14930,AT2G43590,AT1G18330,AT1G32470,AT4G35250,AT3G10840,AT1G28190,AT2G32100,AT1G70820,AT1G25400,AT2G31060,AT1G64980,AT5G52320,AT5G57340,AT2G46400,AT3G15520,AT1G75680,AT5G37600,AT1G23840,AT4G34760,AT2G02500,AT1G12800,AT5G38520,AT4G17900,AT1G51090,AT4G37530,AT1G50450,AT4G37330,AT5G57890,AT1G16500,AT3G63160,AT1G12240,AT4G25080,AT1G68440,AT4G36220,AT2G32210,AT2G34960,AT2G30150,AT5G46690,AT5G13400,AT1G26690,AT4G17720,AT4G19985,AT5G56250,AT3G25920,AT2G30010,AT1G64680,AT2G28605,AT5G46520,AT2G22500,AT2G33580,AT5G57910,AT1G53310,AT1G70760,AT4G19530,AT1G77060,AT5G40380,AT3G10520,AT5G11920,AT3G60690,AT4G38860,AT5G62770,AT4G00500,AT2G22230,AT5G62140,AT1G65900,AT5G44130,AT4G26910,AT4G01460,AT5G47120,AT5G67450,AT1G29070,AT1G01790,AT1G73655,AT4G00410,AT2G02810,AT4G35920,AT1G06000,AT5G10300,AT1G11860,AT1G72520,AT3G19480,AT3G52840,AT2G36885,AT3G25805,AT1G14290,AT4G31850,AT2G32500,AT5G54140,AT1G17860,AT3G02520,AT1G12500,AT2G33800,AT3G05360,AT5G04720,AT1G23830,AT3G28460,AT1G74070,AT1G68840,AT3G13810,AT1G14280,AT1G60550,AT4G29020,AT1G80380,AT4G36670,AT4G11175,AT3G49670,AT2G43030,AT1G70420,AT4G26530,AT4G21760,AT1G31550,AT2G40140,AT3G52870,AT2G40000,AT4G25960,AT4G39230,AT3G62700,AT5G49730,AT2G27660,AT3G19010,AT3G13910,AT3G28040,AT3G03440,AT4G31820,AT2G39710,AT3G44735,AT3G48890,AT3G24770,AT1G15980,AT3G11340,AT5G14320,AT5G51640,AT4G18010,AT3G25020,AT1G71697,AT5G14910,AT5G19530,AT3G56910,AT2G11520,AT3G16050,AT3G13120,AT5G45820,AT3G29185,AT5G12250,AT1G32700,AT5G10160,AT2G37710,AT1G05300,AT1G78630,AT1G07180,AT1G23400,AT3G55270,AT4G23570,AT4G02790,AT1G23750,AT2G45560,AT5G64460,AT3G01480,AT1G01430,AT3G57320,AT1G13100,AT3G48100,AT1G20650,AT1G01610,AT1G52600,AT5G54160,AT5G39785,AT5G43870,AT5G13190,AT4G00360,AT2G38460,AT4G16155,AT4G28570,AT4G09010,AT5G12420,AT3G55800,AT2G20145,AT3G56060,AT2G41380,AT5G56100,AT1G02930,AT1G05570,AT1G69700,AT1G28680,AT4G23940,AT1G55360,AT4G18570,AT5G04810,AT1G21550,AT3G19260,AT2G37130,AT5G62360,AT5G06270,AT4G28660 CHANDRAN_ICS1-WT-T2_UP Up-regulated-ics1 vs. WT T2 (Worksheet S1 PubmedID:19176722) AT2G14610,AT5G03350,AT4G10500,AT3G48080,AT5G24530,AT5G22570,AT2G14560,AT1G30900,AT2G40750,AT1G14870,AT3G11010,AT5G54610,AT3G56400,AT4G31800,AT2G24850,AT2G32680,AT5G10760,AT3G23110,AT4G23140,AT1G35710,AT5G44420,AT5G60900,AT1G13470,AT3G49620,AT4G23220,AT5G52750,AT3G26210,AT1G66960,AT1G02450,AT1G74710,AT2G47130,AT3G51330,AT3G57260,AT1G45145,AT5G59680,AT1G21250,AT5G55420,AT5G52760,AT1G52290,AT3G28540,AT3G30720,AT4G01700,AT4G00700,AT4G23610,AT3G62780,AT2G30140,AT3G25010,AT4G03450,AT1G66880,AT2G24160,AT4G28490,AT5G20630,AT1G08450,AT4G21380,AT4G04220,AT3G13790,AT4G14400,AT2G39210,AT1G15790,AT4G11890,AT2G26440,AT3G57240,AT1G10340,AT3G08870,AT4G23310,AT3G51440,AT1G03850,AT5G24780,AT5G58310,AT5G59670,AT1G51800,AT3G56710,AT5G55170,AT2G23680,AT3G25020,AT4G20110,AT5G45380,AT3G22231,AT5G60950,AT4G02380,AT4G23810,AT3G45860,AT1G01560,AT1G74440,AT2G29120,AT2G46440,AT1G73800,AT5G52810,AT5G61160,AT1G55910,AT4G35180,AT5G44810,AT5G46230,AT4G37370,AT1G52200,AT1G28480,AT1G56120,AT5G45460,AT5G55450,AT4G26090,AT4G13900,AT5G40780,AT1G68710,AT4G23150,AT3G22600,AT3G45290,AT3G28510,AT1G23840,AT4G36150,AT5G53110,AT4G11900,AT5G18780,AT4G22530,AT1G13650,AT1G34750,AT5G24210,AT5G06750,AT1G13750,AT4G39830,AT3G13950,AT3G24900,AT5G23020,AT2G13790,AT1G16260,AT2G31880,AT5G25440,AT3G45620,AT3G01290,AT5G46050,AT5G10380,AT4G25110,AT4G02220,AT5G45500,AT2G33580,AT4G08850,AT3G20590,AT2G25000,AT2G10940,AT5G19240,AT4G24340,AT5G20400,AT3G05650,AT4G23320,AT1G21240,AT5G11920,AT5G49570,AT1G73805,AT5G05460,AT4G32870,AT2G37710,AT4G15210,AT2G30250,AT5G67340,AT4G26070,AT3G07520,AT3G22240,AT1G07000,AT4G14390,AT5G52540,AT1G52800,AT3G11840,AT3G57700,AT1G08050,AT5G64000,AT5G61250,AT3G51860,AT1G34420,AT5G17170,AT2G46270,AT5G22460,AT5G58940,AT2G26020,AT3G26220,AT3G26600,AT4G14610,AT1G19960,AT1G75040,AT1G58290,AT3G09940,AT2G02810,AT2G30695,AT5G19875,AT1G65490,AT5G54860,AT4G24350,AT3G49780,AT3G28890,AT1G65790,AT2G29460,AT3G48650,AT3G50480,AT5G51750,AT3G14280,AT2G45510,AT3G29240,AT3G51890,AT3G09010,AT1G51860,AT1G03400,AT5G20790,AT5G13080,AT2G30770,AT1G21270,AT1G67330,AT1G74360,AT3G01440,AT5G04930,AFFX-AThal-5SrRNA,psbA,AT5G08240,AT1G49050,AT4G23130,AT3G50950,AT1G72060,AT1G67920,AT1G24020,AT4G00955,AT4G18250,AT4G29520,AT1G03290,AT5G50200,AT3G28480,AT5G51720,AT1G76960,AT2G29990,AT2G43570,AT4G23600,AT2G34940,AT3G12500,AT2G17040,AT5G45480,AT1G72680,AT1G11310,AT1G61420,AT5G45800,AT2G28890,AT5G45110,AT2G19190,AT1G03210,AT1G35230,AT4G23480,AT3G51430,AT3G47480,AT5G51010,AT4G23570,AT2G02930,AT2G15040,AT5G62770,AT1G29240,AT4G08470,AT1G12290,AT1G65900,AT5G36930,AT3G53310,AT3G25610,AT4G14365,AT1G68620,AT5G25260,AT1G65690,AT3G09830,AT3G19550,AT4G26270,AT4G38550,AT5G38240,AT5G61210,AT5G48380,AT4G30640,AT5G39020,AT5G27420,AT4G11000,AT4G16590,AT1G09080,AT2G44240,AT5G27830,AT2G17290,AT1G51790,AT5G39050,AT3G09490,AT5G19930,AT1G76970,AT4G33050,AT1G79450,AT4G27860,AT1G48210,AT5G09290,AT1G70520,AT2G24600,AT3G18250,AT2G41090,AT1G70700,AT5G18660,AT3G44400,AT3G15760,AT2G06850,AT5G53550,AT2G16700,AT4G31290,AT3G10940,AT5G07770,AT2G22980,AT1G72930,AT4G36110,AT5G44820,AT5G49760,AT4G17070,AT2G18660,AT5G38710,AT1G16670,AT1G77510,AT2G23200,AT3G21810,AT1G09500,AT3G17700,AT1G69523,AT3G57630,AT4G19660,AT5G38900,AT2G39030,AT1G07260,AT1G13210,AT3G17790,AT1G78210,AT1G05630,AT2G30550,AT5G45510,AT1G05570,AT5G18470,AT5G05060,AT4G16660,AT3G55470,AT2G17120,AT1G71040,AT3G20250,AT5G64410,AT1G14150,AT3G04210,AT5G13140,AT4G21800,AT5G45650,AT1G47890,AT1G67810,AT1G51890,AT5G08380,AT4G02420,AT1G78410,AT2G39710,AT4G25100,AT5G61790,AT1G32700,AT2G45470,AT1G78970,AT1G09350,AT4G34135,AT4G27470,AT1G59710,AT4G11840,AT1G12990,AT5G53120,AT1G20350,AT2G29350,AT2G36885,AT1G26230,AT3G23550,AT1G55330,AT1G12845,AT1G15670,AT1G56600,AT3G54960,AT5G04720,AT5G44070,AT3G05660,AT5G67070,AT1G72700,AT5G51830,AT4G12830,AT5G24110,AT3G63080,AT5G65660,AT3G16990,AT3G30180,AT2G01650,AT1G30410,AT4G23180,rps14,AT5G03320,AT3G26230,AT1G04980,AT1G09750,AT1G07220,AT3G47430,AT1G33420,AT2G26170,AT2G38940,AT4G26060,AT5G56250,AT2G40270,AT1G74170,AT1G26690,AT3G63380,AT4G01720,AT2G32290,AT4G29810,AT1G74590,AT5G28540,AT4G39950,AT5G10610,AT2G47800,AT1G24150,AT1G67850,AT3G50280,AT5G04150,AT2G46620,AT5G50335,AT4G34090,AT4G05590,AT1G66970,AT4G19370,AT3G52430,AT3G13610,AT5G45950,AT2G32160,AT3G55630,AT2G03420,AT3G13910,AT4G18880,AT3G11820,AT5G23520,AT3G60540,AT1G75170,AT3G60450,AT2G01540,AT5G38990,AT5G52100,AT1G06000,AT5G13730,AT1G64610,AT4G35600,AT5G15860,AT1G18380,AT2G03510,AT3G12830,AT1G62840,AT5G41740,AT5G58570,ndhB.1,AT1G14370,AT2G15080,AT5G57550,AT5G37740,AT2G37640,AT5G47070,AT5G19980,AT3G62600,AT1G17610,AT2G05320,AT3G51450,AT3G09020,AT2G41410,AT4G13510,AT2G39420,AT1G13260,AT3G16250,AT1G50740,AT3G10840,AT4G28390,AT5G42900,AT4G35770,AT4G09350,AT4G37640,AT3G10010,AT5G42830,AT2G43590,AT1G78550,AT4G22670,AT5G64380,AT4G19030,AT2G21850,petD,AT1G34180,AT3G56980,AT1G58270,AT2G32800,AT4G18430,AT4G11530,AT3G49060,AT3G24090,AT5G19750,AT1G76790,AT5G25190,AT1G51660,AT4G23540,AT1G21310,AT4G22980,AT2G44380,AT1G02360,AT4G08300,AT3G45260,AT4G33300,AT2G17220,AT3G05800,AT1G07630,AT4G08480,AT1G72280,AT4G00050,AT4G24190,AT5G63780,AT1G68540,AT5G08050,AT5G52640,AT3G26440,AT4G33110,AT1G51115,AT3G17910,AT5G45000,AT1G51920,AT1G19670,AT4G01130,AT4G37530,AT2G44180,AT2G04790,AT1G11320,psbT,AT5G01610,AT5G11970,AT3G04480,AT4G31790,AT5G05320,AT2G28940,AT3G26830,AT4G16740,AT1G69720,AT3G17640,AT5G53370,AT2G40540,AT5G01850,AT2G26330,AT4G37330,AT3G27210,AT3G21640,AT1G48330,AT4G21850,AT1G25580,AT1G27480,AT1G26770,AT1G06160,AT2G04450,AT5G47580,AT3G46670,AT5G07820,AT5G58350,AT4G27030,AT5G61010,AT2G45010,AT4G29050,AT4G23820,AT1G74700,AT5G55740,AT3G50440,AT3G11340,AT4G15530,AT1G65500,AT2G34620,AT2G35020,AT1G49750,AT5G26340,AT5G59320,AT1G78995,AT5G22060,AT5G52820,AT5G53880,AT1G14345,AT3G19010,AT5G56870,AT5G37600,AT3G09540,AT3G23520,AT5G25930,AT4G10960,AT1G07020,AT5G67450,AT5G58260,AT5G39210,AT4G04540,AT1G78450,AT5G42050,AT3G47010,AT3G03560,AT4G11850,AT5G20935,AT3G15520,AT4G21120,AT3G46110,AT2G34560,AT2G32640,AT5G60280,AT5G44050,AT1G70530,AT5G55130,AT4G23010,AT2G42540,AT2G40600,AT2G18680,AT3G43510,AT1G33720,AT2G19130,AT3G02040,AT4G25000,AT3G12610,AT2G33530,AT5G55930,AT1G79380,AT1G25560,AT2G26190,AT3G49370,AT5G02290,AT3G26090,AT4G38260,AT4G17695,AT3G18370,AT1G09415,AT4G12480,AT5G24030,AT3G50260,AT3G14470,AT2G01870,AT3G47090,AT4G27830,AT1G17500,AT3G08720,AT1G19270,AT2G46420,AT2G01590,AT3G23010,AT5G06320,AT1G11260,AT1G66130,AT5G62610,AT4G21870,AT1G03370,AT4G08290,AT4G10120,AT2G31060,AT1G11330,AT2G38470,AT1G01340,AT4G34390,AT2G43000,AT2G38860,AT5G56230,AT2G40300,AT3G16670,AT1G23140,AT4G10030,AT3G21560,AT1G14360,AT4G05020,AT2G47930,AT1G80130,AT1G80840,AT4G13180,AT2G40650,psbB,AT5G40690,AT1G53885,AT1G04870,AT5G66320,AT2G19710,AT1G55490,AT5G56610,AT5G45280,AT5G44130,AT4G36010,AT4G22250,AT1G55370,AT5G23850,AT4G29700,AT4G28660,AT4G23885,AT4G00755,AT2G29450,AT2G44500,AT2G38210,AT4G14560,AT5G16880,AT2G16595,AT2G38465,AT1G03430,AT2G17710,AT3G26670,AT4G26550,AT3G48640,AT4G31500,AT4G12490,AT1G15410,AT2G26560,AT3G47070,AT4G30230,AT3G21630,AT1G59930,AT1G61250,AT5G63080,AT1G62510,AT4G21830,AT3G53150,AT1G55260,AT2G29400,AT1G49650,AT5G01015,AT3G01080,AT2G12550,AT1G19150,AT3G53900,AT1G01010,AT2G46150,AT4G10970,AT1G64680,AT1G49710,AT1G04040,AT4G04490,AT1G67520,AT2G41230,AT5G23920,AT4G39890,AT2G32540,AT5G43910,AT3G57480,AT1G15180,AT2G01830,AT1G09560,AT2G17130,AT4G14220,AT1G22280,AT3G52400,AT5G40300,AT3G55330,AT4G25900,AT4G16780,AT4G35110,AT1G62380,AT3G45930,AT4G20000,AT4G39820,AT1G75130,AT3G01350,AT5G05090,AT1G07640,AT4G37290,AT4G12970,AT5G07340,AT3G54400,AT1G05560,AT2G02360,AT1G11720,AT1G53710,AT5G57580,AT3G56090,AT5G52740,AT1G22180,AT3G13330,AT5G50630,AT1G32900,AT1G71880,AT1G04530,AT5G17760,AT1G21400,AT1G66820,AT4G29740,AT2G47060,AT1G49380,AT3G13560,AT1G18390,AT2G46450,AT1G55210,AT3G22160,AT4G37080,AT5G05190,AT1G55265,AT3G43800,AT1G75080,AT5G24150,AT3G02910,AT4G36210,AT3G57330,AT1G54570,AT1G67970,AT1G17745,AT3G53780,AT5G58770,AT2G15830,AT3G55850,AT3G51660,AT5G47220,AT3G46510,AT1G74070,AT3G14050,AT4G33666,AT1G11860,AT5G58480,AT1G70740,AT5G61190,AT5G10695,AT3G28200,AT5G39950,AT1G17430,AT1G09210,AT4G30490,AT4G19670,AT1G17440,AT5G50800,AT4G14020,AT1G26420,AT1G55450,AT2G26970,AT3G23510,AT1G72900,AT4G18970,AT5G01600,AT1G10050,AT3G25070,AT1G33030,AT1G02930,AT4G11370,AT3G03470,AT5G07360,AT5G65730,AT4G34480,AT5G10740,AT1G59620,AT2G38400,AT1G69490,AT1G23205,AT4G22570,AT5G20480,AT4G38430,AT5G12890,AT1G13830,AT1G70280,AT3G05730,AT2G17720,AT1G23830,AT3G50920,AT3G21220,AT1G30640,AT2G43850,AT1G27030,AT4G15630,AT1G17650,AT3G14620,AT1G75510,AT4G17090,AT1G64280,AT5G62140,AT4G28420,AT4G24930,AT1G18890,AT1G14790,AT4G37800,AT3G12740,AT1G69270,AT1G23400,AT5G08160,AT5G08410,AT3G53670,AT2G24650,AT5G52970,AT4G26520,AT2G15050,AT1G44800,AT1G28330,AT1G12240 KNOTH_COL-0_48H-DCA-TREATMENT_DN Down-regulated in Col-0 after 48h DCA treatment (Table S3 PubmedID:19304930) AT1G62510,AT1G64380,AT5G14410,AT2G41990,AT5G01520,AT2G47930,AT5G04820,AT1G15260,AT1G69690,AT1G14290,AT5G23750,AT2G28660,AT3G20680,AT1G62500,AT3G21360,AT1G02110,AT2G23560,AT3G18050,AT1G69230,AT4G23400,AT1G34010,AT1G75770,AT4G21310,AT5G65390,AT5G05890,AT4G27230,AT5G66330,AT3G06750,AT4G34750,AT4G27435,AT1G76020,AT1G08880,AT2G28810,AT5G27670,AT3G10810,AT3G47600,AT1G14900,AT3G07540,AT2G35470,AT3G49360,AT3G17365,AT1G54200,AT1G35420,AT2G17265,AT4G37250,AT3G52860,AT5G58480,AT4G34265,AT1G05070,AT5G10160,AT1G02620,AT3G24800,AT3G53420,AT1G69800,AT4G04510,AT1G30130,AT3G59000,AT3G52155,AT1G22910,AT1G56710,AT3G42710 KNOTH_COL-0_48H-DCA-TREATMENT_UP Up-regulated in Col-0 after 48h DCA treatment (Table S3 PubmedID:19304930) AT4G23220,AT5G22570,AT4G39830,AT5G39020,AT3G17700,AT3G09490,AT3G62780,AT4G33050,AT2G26190,AT1G66880,AT1G13470,AT4G21380,AT1G10340,AT5G24530,AT1G35710,AT1G01560,AT3G48090,AT3G45860,AT2G23200,AT3G56400,AT2G31880,AT4G11890,AT3G11840,AT4G14365,AT4G37370,AT5G55170,AT5G60950,AT4G23610,AT4G01700,AT1G21250,AT1G13750,AT1G34750,AT1G02360,AT5G55450,AT4G18250,AT3G09020,AT2G17040,AT1G34420,AT4G13180,AT3G14620,AT2G40750,AT2G32680,AT4G19660,AT2G15390,AT4G11850,AT1G74440,AT3G50930,AT2G47130,AT1G19270,AT5G04930,AT5G22380,AT4G26270,AT3G48650,AT3G04480,AT5G61010,AT3G48640,AT4G11000,AT5G61210,AT4G08850,AT2G19130,AT1G02450,AT1G01340,AT4G25940,AT1G62300,AT5G25440,AT1G21270,AT4G26070,AT1G73805,AT5G47070,AT5G67340,AT1G67800,AT4G20110,AT1G08450,AT4G18880,AT5G45510,AT5G44820,AT2G02800,AT5G66640,AT2G29460,AT5G36930,AT4G37640,AT5G38210,AT2G25510,AT5G39670,AT1G02850,AT2G41730,AT1G16260,AT4G17720,AT1G76970,AT2G40000,AT2G27660,AT5G60900,AT3G25610,AT4G35180,AT5G26920,AT4G01010,AT4G38550,AT5G52750,AT1G03370,AT2G23320,AT4G14400,AT4G34390,AT3G50480,AT5G12940,AT2G38470,AT2G41090,AT5G54860,AT2G17290,AT1G18570,AT1G05570,AT2G14560,AT5G52760,AT1G71040,AT2G26560,AT4G22530,AT1G73800,AT1G24150,AT5G22060,AT4G33300,AT3G56710,AT2G40270,AT5G40170,AT3G28480,AT5G67450,AT2G28890,AT2G39030,AT3G18370,AT3G52430,AT3G21630,AT3G54150,AT1G64280,AT1G11330,AT2G29990,AT4G35600,AT4G08480,AT1G18900,AT2G31740,AT1G07000,AT3G28450,AT5G52540,AT5G03350,AT1G57630,AT2G30250,AT2G32160,AT1G70530,AT5G14930,AT3G50950,AT5G49760,AT1G18380,AT1G24140,AT1G16670,AT5G06750,AT2G23680,AT3G50140,AT4G25900,AT5G25930,AT5G26340,AT1G03850,AT2G26440,AT1G72900,AT4G39670,AT3G29400,AT2G46400,AT2G03760,AT1G18390,AT2G17220,AT2G44420,AT3G16030,AT3G60420,AT3G01290,AT3G29075,AT1G25390,AT2G24850,AT1G66970,AT4G28400,AT5G44070,AT3G19010,AT1G17610,AT5G45380,AT5G42050,AT4G25030,AT1G74300,AT3G22231,AT5G05300,AT1G17745,AT3G09940,AT5G48380,AT3G01830,AT3G44720,AT2G32030,AT2G37710,AT1G11310,AT4G35310,AT2G26600,AT4G24970,AT1G31580,AT1G67470,AT1G74360,AT4G01610,AT5G02290,AT4G29810,AT5G03320,AT1G51620,AT2G29120,AT4G29050,AT2G33580,AT1G67940,AT3G01080,AT1G15890,AT3G57330,AT1G70520,AT1G66980,AT2G31990,AT4G22980,AT2G11520,AT1G18890,AT5G56260,AT5G45480,AT3G45640,AT1G35210,AT3G46110,AT3G14840,AT1G22280,AT2G15080,AT1G05680,AT1G79380,AT4G12070,AT4G39890,AT5G44290,AT2G20420,AT1G30000,AT1G72940,AT3G08720,AT5G39030,AT4G09570,AT5G11250,AT3G28210,AT5G05190,AT3G11820,AT5G17990,AT5G60360,AT5G45110,AT3G55950,AT1G51660,AT1G55120,AT5G57220,AT1G69730,AT5G24810,AT2G24600,AT5G42380,AT3G52400,AT3G28940,AT1G78620,AT2G35510,AT3G53810,AT4G30060,AT4G16890,AT4G23270,AT1G61140,AT5G58120,AT5G15730,AT5G47960,AT2G41880,AT3G61190,AT1G72280,AT2G44490,AT1G17600,AT4G02330,AT1G55450,AT1G13210,AT5G07910,AT5G61900,AT4G16860,AT1G14370,AT1G25550,AT1G10410,AT3G46600,AT5G66730,AT4G23180,AT4G23190,AT3G09830,AT3G57630,AT5G26030,AT1G33600,AT4G00570,AT3G56050,AT2G41640,AT1G30640,AT2G37940,AT3G46930,AT4G36550,AT4G27280,AT1G73540,AT4G39640,AT4G16950,AT1G59870,AT2G32800,AT4G27830,AT2G31870,AT1G20100,AT4G23010,AT5G17020,AT4G00955,AT1G30370,AT1G21380,AT3G47570,AT1G07520,AT3G50760,AT1G69550,AT3G14090,AT1G74560,AT3G10640,AT1G10720,AT5G25050,AT5G63410,AT3G22370,AT2G46500,AT1G50740,AT4G01090,AT2G22300,AT2G02220,AT3G23250,AT5G62620,AT2G19710,AT5G46520,AT5G20480,AT4G24940,AT2G39650,AT1G69930,AT1G66090,AT1G28380,AT5G41180,AT3G02800,AT1G53920,AT5G58670,AT1G70740,AT5G61820,AT5G62570,ATCG00170,AT4G00970,AT4G13410,AT3G55980,AT2G35930,AT1G27770,AT1G69840,AT1G09940,AT1G71697,AT1G21130,AT4G30600,AT5G45710,AT4G12720,AT1G29340,AT4G20830,AT3G44630,AT4G30340,AT4G17615,AT5G04870,AT1G56510,AT4G11150,AT2G25460,AT3G05580,AT4G29780,AT1G62200,AT5G63490,AT2G23770,AT5G65290,AT1G27100,AT5G64300,AT3G15710,AT5G24590,AT4G18950,AT5G49520,AT5G22690,AT4G32060,AT4G34430,AT5G53460,AT1G59620,AT4G33920,AT3G26980,AT1G35350,AT2G39360,AT3G49530,AT2G06530,AT1G64060,AT5G45340,AT3G57070,AT5G51190,AT1G70750,AT1G17170,AT4G21390,AT1G11050,AT1G77220,AT5G20050,AT4G12790,AT3G07040,AT2G31820,AT5G39940,AT4G19510,AT5G46910,AT3G24350,AT3G24440,AT3G09870,AT1G59910,AT1G11890,AT4G02200,AT3G09560,AT1G21120,AT5G07070,AT4G31000,AT5G62600,AT1G30620,AT1G16130,AT1G74330,AT4G25210,AT3G13320,AT1G75860,AT1G20310,AT1G77250,AT2G32020,AT5G60270,AT2G37430,AT1G23710,AT3G23230 KNOTH_COL-0_6D-DCA-TREATMENT_DN Down-regulated in Col-0 after 6 day DCA treatment. (Table S4 PubmedID:19304930) AT5G12030,AT5G12020,AT2G46240 KNOTH_COL-0_48H-INA-TREATMENT_DN Down-regulated in Col-0 after 48h INA treatment (Table S5 PubmedID:19304930) AT5G36910,AT2G41990,AT1G64380,AT2G23560,AT5G46690,AT2G18890,AT5G05890,AT5G23750,AT3G60290,AT2G29290,AT5G65390,AT1G19320,AT3G50660,AT1G18650,AT2G45470,AT1G28100,AT4G25990,AT4G27435,AT1G53520,AT2G36830,AT2G38460,AT5G45040,AT4G20870,AT5G13140,AT2G46110,AT2G13820,AT3G07540,AT1G64355,AT4G19830,AT5G23870,AT1G56720,AT2G05990,AT1G29980,AT4G00950,AT3G02580,AT5G10160,AT3G56130,AT5G64380,AT1G25290,AT3G24800,AT1G69230,AT1G29520,AT1G21790,AT4G37250,AT1G76020,AT1G26210,AT4G38160,AT4G22830,AT2G47840,AT1G62640,AT1G12250,AT2G24090,AT1G35420,AT3G06840,AT1G21070,AT5G51545,AT1G02620,AT3G51510,AT3G15030,AT3G49670,AT1G48240,AT4G12730,AT5G59250,AT5G47330,AT5G25220,AT2G28810,AT3G02110,AT5G15530,AT3G15690,AT5G58480,AT3G53800,AT1G27050,AT5G11460,AT3G24506,AT3G60210,AT3G52155,AT1G56500,AT1G29070,AT5G25490,AT3G48450,AT1G24260,AT1G05070,AT4G34215,AT2G44920,AT2G03740,AT5G47310,AT2G46580 KNOTH_COL-0_48H-INA-TREATMENT_UP Up-regulated in Col-0 after 48h INA treatment (Table S5 PubmedID:19304930) AT4G23220,AT4G39830,AT5G39020,AT3G17700,AT4G33050,AT2G26190,AT4G14365,AT2G40000,AT5G40170,AT5G47070,AT3G14620,AT3G48650,AT4G25940,AT4G01700,AT5G25440,AT1G01560,AT2G15390,AT3G11840,AT3G62780,AT3G48090,AT4G11000,AT3G28210,AT2G38470,AT2G23200,AT1G11310,AT5G04930,AT1G73805,AT5G22570,AT4G08850,AT2G17290,AT2G31880,AT3G09490,AT3G50930,AT3G50950,AT1G19270,AT3G04480,AT5G44820,AT4G34390,AT2G26600,AT5G25930,AT1G22280,AT1G21250,AT3G09020,AT5G61010,AT2G41090,AT2G31740,AT4G21380,AT2G40750,AT4G38550,AT5G26920,AT5G44070,AT5G36930,AT2G40270,AT3G54150,AT1G21270,AT1G03370,AT3G56400,AT1G66880,AT2G15080,AT3G28450,AT5G66640,AT5G24530,AT1G67470,AT5G61210,AT4G17720,AT3G29075,AT3G29400,AT3G08720,AT4G09570,AT1G51620,AT4G26270,AT2G30250,AT4G11850,AT3G25610,AT1G73800,AT1G11330,AT1G34750,AT1G16670,AT1G72900,AT3G46110,AT1G10340,AT1G35710,AT1G13750,AT4G35180,AT2G17040,AT4G19660,AT4G14400,AT2G41730,AT1G74440,AT2G25510,AT1G18900,AT5G54860,AT4G26070,AT4G29050,AT2G02800,AT4G37640,AT2G17220,AT5G12940,AT4G11890,AT4G01010,AT4G18880,AT2G27660,AT3G45640,AT4G37370,AT3G48640,AT2G11520,AT4G28400,AT2G32030,AT4G39670,AT5G38210,AT1G62300,AT1G35210,AT1G17610,AT5G22060,AT5G42050,AT3G16030,AT1G70520,AT3G19010,AT3G09940,AT1G24150,AT1G74360,AT3G01290,AT3G56710,AT5G67450,AT1G25390,AT1G18890,AT2G26560,AT5G52760,AT3G45860,AT1G02360,AT4G12070,AT5G49760,AT5G14930,AT1G34420,AT3G18370,AT2G39030,AT1G64280,AT2G19130,AT2G44420,AT3G21630,AT2G03760,AT1G67800,AT3G57330,AT5G02290,AT4G35310,AT5G11250,AT4G25030,AT1G24140,AT1G72940,AT5G39030,AT3G50480,AT1G05570,AT2G24850,AT5G45480,AT5G57220,AT1G18570,AT5G22380,AT2G33580,AT5G45110,AT1G66970,AT2G14560,AT4G33300,AT5G39670,AT5G44290,AT1G16260,AT3G01830,AT5G06750,AT1G01340,AT1G03850,AT3G28480,AT2G28890,AT1G05680,AT3G55950,AT5G48380,AT1G76970,AT2G23680,AT5G05300,AT4G13180,AT3G22231,AT4G18250,AT5G03320,AT2G29460,AT1G66980,AT2G26440,AT3G11820,AT5G45510,AT5G52750,AT2G23320,AT5G03350,AT5G60950,AT5G56260,AT2G47130,AT4G25900,AT3G50140,AT1G13470,AT2G46400,AT3G14840,AT4G20110,AT1G02850,AT2G32160,AT5G60900,AT1G71040,AT1G15890,AT1G02450,AT3G44720,AT4G35600,AT1G67940,AT1G31580,AT3G60420,AT1G08450,AT1G57630,AT2G37710,AT1G51660,AT1G07000,AT2G29990,AT5G55450,AT4G22530,AT3G52430,AT2G31990,AT4G01610,AT2G20420,AT1G69730,AT5G26340,AT5G17990,AT1G74300,AT1G18380,AT4G22980,AT4G39890,AT5G52540,AT4G08480,AT4G23610,AT3G01080,AT5G45380,AT5G55170,AT4G29810,AT1G79380,AT5G05190,AT5G60360,AT1G17745,AT4G24970,AT2G32680,AT2G29120,AT1G30000,AT1G18390,AT1G70530,AT5G67340,AT1G55120,AT3G48080,AT1G49050,AT1G15430,AT3G59700,AT4G04220,AT3G47250,AT2G43970,AT3G26600,AT3G22240,AT1G75510,AT1G69720,AT5G46250,AT1G45145,AT2G18660,AT5G08240,AT2G44180,AT5G23850,AT5G24210,AT5G10760,AT2G17720,AT5G49570,AT4G23130,AT4G08470,AT5G22530,AT2G45010,AT1G67850,AT4G23570,AT3G23560,AT3G25020,AT4G01370,AT1G67550,AT5G45000,AT3G57480,AT1G22070,AT5G12890,AT4G14610,AT4G25110,AT5G52810,AT5G58350,AT3G21780,AT3G10500,AT1G49750,AT5G54610,AT5G45500,AT2G40600,AT5G59670,AT2G17120,AT5G27430,AT2G39210,AT4G10970,AT1G59960,AT1G14000,AT1G17430,AT3G59660,AT1G77130,AT4G05020,AT5G38630,AT3G22060,AT5G19980,AT2G18690,AT1G07630,AT1G23830,AT2G38860,AT4G26910,AT2G20010,AT5G20400,AT5G05460,AT3G57240,AT3G28540,AT5G02620,AT3G45620,AT2G44380,AT4G36150,AT5G37740,AT1G54030,AT1G05350,AT5G13680,AT1G03290,AT4G16265,AT3G51440,AT1G23140,AT3G26210,AT5G01850,AT5G37600,AT3G15260,AT1G15790,AT1G20350,AT3G54640,AT2G20960,AT3G06300,AT1G14790,AT5G27420,AT2G05380,AT2G18680,AT1G59590,AT1G51790,AT5G23520,AT5G27600,AT2G22480,AT1G35230,AT5G60800,AT5G61250,AT1G69270,AT3G12040,AT3G12740,AT4G19880,AT4G32870,AT1G01800,AT4G11840,AT1G72240,AT5G40230,AT5G08380,AT3G51890,AT3G57260,AT4G39820,AT1G64610,AT1G26690,AT5G10380,AT4G34460,AT5G07770,AT2G34940,AT5G53550,AT5G45250,AT1G67810,AT2G26400,AT1G22650,AT1G26550,AT2G28940,AT1G08050,AT3G63420,AT4G14220,AT5G18470,AT2G04430,AT5G11560,AT5G39950,AT5G01540,AT3G51330,AT3G26230,AT3G16990,AT5G55130,AT5G39050,AT5G12930,AT1G75040,AT3G20510,AT2G24160,AT5G45410,AT2G01650,AT1G78550,AT5G07360,AT5G42830,AT2G03510,AT4G19050,AT2G30140,AT3G54960,AT2G43570,AT3G44350,AT5G15870,AT3G26830,AT1G12220,AT5G60280,AT1G02500,AT2G04450,AT1G23840,AT1G30900,AT1G03400,AT5G27830,AT5G17760,AT4G26130,AT1G09560,AT5G18750,AT3G25010,AT3G13060,AT4G23150,AT4G23470,AT5G59680,AT4G23210,AT1G01010,AT5G54140,AT1G54320,AT2G14580,AT1G03210,AT5G21090,AT4G23320,AT2G16060,AT5G56230,AT1G26380,AT4G10500,AT5G18780,AT1G63460,AT4G12010,AT4G28490,AT3G57700,AT1G05170,AT4G09460,AT3G56310,AT5G56610,AT3G29250,AT2G31060,AT5G19930,AT1G72680,AT2G02390,AT5G05680,AT4G16700,AT4G26060,AT1G48970,AT5G50200,AT5G20950,AT2G31390,AT3G20250,AT3G51430,AT2G04040,AT3G47480,AT4G30640,AT3G53310,AT5G53110,AT1G26420,AT3G55130,AT5G52740,AT3G26220,AT3G07580,AT5G46050,AT2G16595,AT1G67330,AT3G24900,AT4G38560,AT5G20990,AT5G26700,AT3G60470,AT3G07520,AT2G30550,AT4G27270,AT4G28390,AT5G47850,AT3G11340,AT5G44460 KNOTH_6D-INA-TREATMENT_DN Down-regulated 6 days after INA treatment (Table S6 PubmedID:19304930) AT3G12580,AT2G29500,AT3G28220,AT1G54050,AT5G24420,AT5G12030,AT1G74310,AT5G36910,AT1G17650,AT5G12110,AT4G23600,AT1G74890,AT3G60290,AT5G03130,AT3G09350,AT2G29290,ATCG00420,AT4G23750,AT1G33340,AT5G19260,AT5G12020,AT2G18890,AT3G62820,AT3G50660,AT3G48420,AT2G32500,AT1G17870,AT1G53520,AT2G20560,AT4G27410,AT4G15690,AT1G30070,AT1G32200,AT4G19830,AT2G26150,AT5G64460,AT4G24670,AT1G72940,AT2G46780,AT3G20300,AT4G15700,AT5G52970,AT2G46910,AT2G46240,AT5G23750,AT3G46230,AT4G32570,AT2G30170,AT1G76570,AT1G18060,AT3G61080,AT4G14690,AT5G27450,AT1G26210,AT5G04900,ATCG00170,AT3G14110,AT5G25590,AT4G39460,AT5G05890,AT5G13140,AT2G05990,AT1G12860,AT5G51440,AT5G54600,AT2G32120,AT1G32470,AT4G32590,AT3G03270,AT4G38370,AT5G10620,AT1G56500,AT1G69230,AT3G53800,AT1G34430,AT1G27285,AT1G24070,AT1G70780,AT2G29050,AT4G38160,AT3G24800,AT1G02950,AT3G28840,AT1G74880,AT5G16810,AT2G14520,AT4G35970,AT1G76670,AT4G11450,AT1G78440,AT1G32020,AT4G32900,AT3G52155,AT1G78990,AT5G37300,AT1G29070,AT4G28850 KNOTH_6D-INA-TREATMENT_UP Up-regulated in Col-0 after 6 days INA treatment (Table S6 PubmedID:19304930) AT1G67000,AT4G36470,AT3G27610,AT1G21720,AT4G12070,AT5G27430,AT5G17890,AT1G17080,AT2G28350,AT2G41490,AT5G24110,AT4G07820,AT3G28890,AT2G47640,AT2G25510,AT2G02800,AT1G01340,AT5G44460,AT4G10970,AT1G66960,AT3G28450,AT4G26130,AT5G21090,AT1G33840,AT5G01850,AT1G12160,AT3G02770,AT4G17720,AT4G01910,AT1G51620,AT4G39820,AT1G28280,AT1G25370,AT5G19320,AT1G54030,AT5G10650,AT2G30930,AT5G12890,AT3G20960,AT1G64610,AT5G02040,AT3G53310,AT3G06300,AT1G74360,AT5G40230,AT4G08480,AT2G05520,AT2G21850,AT1G62300,AT3G63420,AT2G44670,AT4G23320,AT5G07770,AT1G16500,AT1G51790,AT1G18890,AT3G28950,AT4G30080,AT5G22530,AT2G17120,AT5G20950,AT1G63460,AT3G59700,AT3G23560,AT5G60280,AT1G34180,AT5G18750,AT4G28400,AT3G20510,AT1G51890,AT5G52390,AT3G56310,AT4G27270,AT2G43000,AT3G11840,AT3G10500,AT2G44180,AT2G16595,AT2G34940,AT4G30640,AT2G44370,AT3G24900,AT5G11000,AT4G18250,AT4G26910,AT3G55130,AT5G37070,AT2G36970,AT3G18830,AT5G45480,AT2G15080,AT5G53110,AT1G66980,AT5G12940,AT5G61210,AT4G23700,AT5G23850,AT2G20780,AT1G76520,AT3G26600,AT2G17720,AT2G30550,AT5G18490,AT1G22070,AT2G14580,AT5G61250,AT5G25440,AT3G28940,AT4G11000,AT3G60180,AT3G43670,AT5G14930,AT5G39950,AT5G55560,AT2G26190,AT3G16030,AT4G36150,AT3G59660,AT4G37640,AT2G17290,AT2G29110,AT4G29050,AT3G17410,AT3G18370,AT4G02370,AT2G25000,AT1G59960,AT1G70530,AT1G25580,AT4G26270,AT4G12010,AT3G50140,AT3G49340,AT3G26090,AT1G17430,AT1G59870,AT4G04220,AT5G45510,AT3G57480,AT4G11850,AT3G26470,AT2G41730,AT3G28850,AT1G16260,AT1G34420,AT5G56230,AT5G45500,AT1G10990,AT1G09560,AT1G67800,AT5G05460,AT1G14260,AT2G01650,AT3G29250,AT4G08850,AT2G40600,AT1G48430,AT5G61010,AT1G35210,AT2G28890,AT5G39030,AT3G25610,AT3G07520,AT4G26070,AT5G49570,AT5G49760,AT4G19660,AT4G04490,AT5G36930,AT5G38210,AT4G23130,AT4G25900,AT2G23200,AT1G34750,AT3G12040,AT2G03510,AT5G04930,AT5G18780,AT5G27830,AT4G33050,AT1G49000,AT4G01610,AT4G38550,AT2G38290,AT3G01080,AT1G51800,AT2G42360,AT4G18880,AT5G07360,AT3G22240,AT3G51890,AT3G20250,AT1G08050,AT5G37480,AT2G31880,AT5G66320,AT3G28930,AT4G16660,AT4G19880,AT3G61630,AT1G18380,AT2G19130,AT3G60470,AT1G77660,AT2G41180,AT2G27660,AT5G18310,AT3G52710,AT4G25940,AT1G23830,AT5G41400,AT4G30270,AT3G25020,AT5G48380,AT3G17700,AT3G09490,AT2G26240,AT5G42440,AT2G23680,AT2G05380,AT2G38860,AT4G23470,AT4G26060,AT1G69720,AT2G15390,AT3G14620,AT4G23310,AT4G23610,AT1G07000,AT5G42830,AT2G46620,AT5G39020,AT2G46400,AT2G01670,AT4G04500,AT1G65690,AT3G13950,AT3G22231,AT3G48090,AT3G12500,AT5G39050,AT5G37740,AT2G29120,AT3G09020,AT5G59680,AT3G51440,AT3G51430,AT4G03450,AT3G28540,AT5G40690,AT1G15790,AT1G74440,AT1G03210,AT1G26380,AT3G49780,AT5G52740,AT5G67340,AT1G24150,AT3G56400,AT3G50930,AT1G76970,AT1G67330,AT3G57700,AT1G05570,AT2G39210,AT1G18390,AT3G48650,AT4G21380,AT5G44820,AT2G40110,AT1G24140,AT2G18680,AT4G28390,AT3G26230,AT2G16060,AT1G13990,AT3G62780,AT2G44380,AT2G24160,AT4G14610,AT1G02360,AT5G54490,AT2G26400,AT5G26731,AT5G17760,AT4G37370,AT2G01540,AT3G61190,AT1G45145,AT5G66640,AT3G50480,AT4G08470,AT5G58570,AT3G56710,AT1G73800,AT3G60540,AT4G17670,AT1G67810,AT2G37130,AT5G20400,AT1G15670,AT5G03350,AT5G26340,AT1G67920,AT4G01700,AT5G05300,AT1G76930,AT2G04450,AT5G08240,AT4G20110,AT1G20350,AT3G09940,AT1G73805,AT3G25010,AT5G39670,AT2G17040,AT4G00700,AT1G08450,AT3G51330,AT5G60900,AT1G21250,AT5G46050,AT1G01560,AT1G57630,AT4G23220,AT2G18690,AT2G30140,AT5G22380,AT3G48080,AT1G30900,AT4G25110,AT5G55170,AT1G23840,AT3G51860,AT1G13750,AT2G24850,AT2G26440,AT5G64000,AT5G37600,AT4G39830,AT1G52200,AT5G50200,AT4G23150,AT1G66880,AT1G58420,AT3G48640,AT1G65500,AT5G10380,AT4G21850,AT2G40750,AT1G10340,AT1G03850,AT1G35710,AT2G26560,AT4G11890,AT5G52760,AT2G47130,AT3G26220,AT1G13470,AT5G45380,AT5G52750,AT5G60950,AT3G47480,AT2G43570,AT1G75040,AT3G45860,AT1G02450,AT3G26210,AT5G18470,AT5G24530,AT2G14560,AT2G32680,AT5G55450,AT4G10500,AT5G10760,AT5G22570,AT3G57240,AT3G57260,AT2G18660 KNOTH_NPR1_48H-DCA-TREATMENT_DN Down-regulated in npr1 after 48h DCA treatment (Table S7 PubmedID:19304930) AT3G47510,AT5G65390,AT2G31085,AT1G22910 KNOTH_NPR1_48H-DCA-TREATMENT_UP Up-regulated in npr1 after 48h DCA treatment (Table S7 PubmedID:19304930) AT4G11150,AT2G45570,AT4G12070,AT2G15490,AT3G57090,AT3G23560,AT3G17700,AT5G40170,AT2G25510,AT1G22280,AT5G04930,AT3G04480,AT2G23200,AT2G02800,AT1G34750,AT5G39020,AT3G62780,AT1G77450,AT2G03760,AT2G40270,AT5G25440,AT1G11310,AT3G28480,AT1G17020,AT4G01610,AT4G19660,AT5G63790,AT1G74440,AT5G44820,AT1G17170,AT5G47070,AT2G31880,AT5G61820,AT4G18880,AT1G13750,AT3G09020,AT4G13180,AT3G56400,AT3G50480,AT1G17745,AT2G41090,AT1G02850,AT3G14620,AT2G39210,AT3G22231,AT1G03850,AT5G24530,AT2G47130,AT3G56710,AT2G30770,AT4G14400,AT1G21250,AT3G28740,AT2G14560 KNOTH_ACID-CLUSTER_DN Down-regulated in ACID cluster (Table S8 PubmedID:19304930) AT1G69230,AT3G52155,AT5G23750,AT3G24800,AT5G05890 KNOTH_ACID-CLUSTER_UP Up-regulated in ACID cluster (Table S8 PubmedID:19304930) AT4G19660,AT5G24530,AT3G14620,AT2G02800,AT2G25510,AT1G74440,AT1G03850,AT2G14560,AT1G21250,AT5G39020,AT2G47130,AT4G18880,AT3G09020,AT3G62780,AT3G56400,AT5G04930,AT2G31880,AT3G22231,AT4G01610,AT3G56710,AT1G13750,AT1G34750,AT3G50480,AT4G12070,AT5G44820,AT5G25440,AT2G23200,AT3G17700,AT2G40750,AT4G38550,AT5G61210,AT1G70530,AT4G33050,AT4G25940,AT4G25900,AT3G16030,AT4G26070,AT2G26190,AT5G26340,AT5G39030,AT3G09490,AT4G37370,AT1G66880,AT5G45380,AT4G17720,AT5G03350,AT5G55170,AT4G08850,AT5G60950,AT3G11840,AT4G20110,AT1G16260,AT2G26440,AT1G10340,AT1G62300,AT5G45510,AT5G48380,AT4G26270,AT5G12940,AT1G57630,AT5G52760,AT2G15080,AT5G52750,AT1G05570,AT5G61010,AT1G73800,AT1G02360,AT4G23220,AT3G45860,AT1G08450,AT1G18890,AT1G67800,AT2G15390,AT4G21380,AT5G39670,AT3G25610,AT5G45480,AT1G76970,AT3G48640,AT1G07000,AT4G29050,AT4G01700,AT5G38210,AT2G23680,AT1G66980,AT4G28400,AT2G17290,AT2G28890,AT3G28450,AT2G46400,AT2G17040,AT1G35710,AT5G49760,AT1G24140,AT3G48090,AT4G11890,AT2G19130,AT1G73805,AT3G18370,AT2G26560,AT1G01560,AT4G08480,AT3G48650,AT1G18390,AT1G02450,AT5G36930,AT2G29120,AT5G55450,AT5G66640,AT4G23610,AT4G11000,AT5G14930,AT5G60900,AT2G24850,AT5G22570,AT1G18380,AT1G35210,AT4G39830,AT4G37640,AT1G13470,AT1G24150,AT4G11850,AT1G34420,AT5G67340,AT2G27660,AT1G74360,AT2G32680,AT1G01340,AT3G50140,AT2G41730,AT3G01080,AT4G18250,AT3G09940,AT5G05300,AT1G51620,AT5G22380,AT3G50930 LI_MYB5_WT-(COL)SEED_UP Up-expressed genes identified in the microarray analysis using myb5 and wildtype (Col) seeds (Table S6 PubmedID:19136646) AT5G22990,AT3G57670,AT5G47220,AT1G28160,AT1G77080,AT5G56460,AT4G23250,AT4G21370,AT1G62090,AT4G23000,AT3G19230,AT1G47885,AT5G54720,AT3G56230,AT4G37800,AT2G29750,AT1G12570,AT3G06360,AT1G64400,AT1G01120,AT5G63390,AT4G28940,AT3G12040,AT2G14160,AT1G67240,AT5G57980,ATCG00810,AT5G44530,AT3G45220,AT3G16880,AT1G65760,AT2G15640,AT2G20380,AT5G58390,AT5G45080,AT5G52720,AT3G45650,AT1G08090,AT1G14660,AT3G46480,AT3G28080,AT2G17590,ATMG00130,AT5G28780,AT5G45630,AT5G36070,AT3G47100,AT3G42590,AT4G38560,AT4G09300,AT4G00790,AT3G17190,AT1G61667,AT1G23590,AT2G27240 LI_MYB5_WT-(COL)SEED_DN Down-expressed genes identified in the microarray analysis using myb5 and wildtype (Col) seeds (Table S6 PubmedID:19136646) AT3G13540,AT1G71030,AT1G79840,AT5G17630,AT4G33810,AT1G26570,AT2G23550,AT2G23580,AT2G15050,AT2G44120,AT1G17860,AT1G66320,AT3G16470,AT3G25780,AT1G18520,AT2G34490,AT1G56580,AT5G60630,AT5G22580,AT3G52550,AT2G33360 LI_MYB5_MYB5&WT(COL)_SEED_UP Up-most Differentially Expressed Genes Identified in the Microarray Analysis Using myb5 and Wild-Type (Col) Seeds (Table 3 PubmedID:19136646) AT2G14160,AT1G64400 LI_MYB5_MYB5&WT(COL)_SEED_DN Down-most Differentially Expressed Genes Identified in the Microarray Analysis Using myb5 and Wild-Type (Col) Seeds (Table 3 PubmedID:19136646) AT3G13540,AT1G71030,AT1G79840,AT2G23550,AT2G23580,AT4G33810,AT3G52550,AT5G60630 CHRISTIANSON_ANAC102_UP Up-regulated in ANAC102 overexpressing lines (Table S1 PubmedID:19176720) AT5G63790,AT5G59310,AT2G37770,AT1G02850,AT1G09500,AT2G43820,AT1G26770,AT2G04040,AT2G37870,AT2G37760,AT5G59320,AT3G04000,AT2G25450,AT5G13360,AT3G59140,AT1G10585,AT4G02280,AT3G02480,AT1G77120,AT5G59510,AT4G33540,AT5G50915,AT4G15490,AT2G14520,AT1G72680,AT5G43580,AT2G23910,AT1G68570,AT4G16690,AT1G62510,AT2G30140,AT3G46670,AT2G04160,AT2G05540,AT5G38910,AT5G27600,AT5G22860,AT3G04520,AT2G24100,AT4G23680,AT4G18360,AT4G34590,AT3G51860,AT1G32960,AT5G43260,AT2G17500,AT5G66400,AT5G61440,AT1G58360,AT1G17745,AT5G17860,AT1G55500,AT4G31860,AT5G16450,AT3G14620,AT2G28400,AT2G02120,AT1G53100,AT5G58310,AT3G23560,AT5G11520,AT4G23600,AT1G05560,AT1G34630,AT4G27830,AT3G14450,AT2G02390,AT3G10910,AT5G13490,AT5G43450,AT3G07720,AT1G23205,AT2G26980,AT1G28600,AT5G38530,AT5G61570,AT5G64770,AT2G45210,AT4G21580,AT3G28007,AT1G01140,AT2G48020,AT3G20300,AT3G50970,AT4G17840,AT2G21620,AT5G12170,AT2G42200,AT5G20830,AT3G60160,AT5G25810,AT4G14690,AT5G03490,AT3G21750,AT4G15530,AT5G37260,AT3G53210,AT1G11170,AT2G27550,AT1G54100,AT1G32170,AT4G32070,AT1G60730,AT4G32770,AT1G07040,AT4G22530,AT3G12580,AT3G15352,AT5G06870,AT1G02205,AT3G27870,AT3G02900,AT1G69380 CHRISTIANSON_ANAC102_DN Down-regulated in ANAC102 overexpressing lines (Table S1 PubmedID:19176720) AT2G43590,AT1G18330,AT3G51240,AT1G11350,AT1G70690,AT3G53150,AT2G47180,AT4G23320,AT5G07580,AT2G03530,AT5G54630,AT1G70520,AT5G03570,AT1G73870,AT4G19430,AT1G78110,AT5G44580,AT4G23496,AT4G19370,AT1G34760,AT3G09490,AT3G26470,AT2G26530,AT3G56980,AT4G31800,AT4G38550,AT1G07000,AT1G17430,AT1G07170,AT2G41100,AT1G73500,AT3G45290,AT2G14560,AT4G14060,AT2G41180,AT1G68840,AT1G34750,AT2G18660,AT2G02930,AT5G47220,AT1G56120,AT1G73830,AT4G30140,AT5G40780,AT4G36220,AT1G56600,AT1G75180,AT3G58810,AT1G23850,AT1G75820,AT4G33720,AT5G60950,AT1G23840,AT5G59680,AT5G08030,AT2G01520,AT2G22240,AT2G26440,AT1G01390,AT2G29160,AT3G14210,AT4G23220,AT1G73480,AT1G78450,AT5G55450,AT5G24770,AT3G04720,AT1G69230,AT4G10500,AT5G54490,AT1G22650,AT5G54190,AT1G02640,AT2G26560,AT4G14630,AT2G19970,AT3G54040,AT3G27690,AT4G27300,AT1G49860,AT4G19810,AT5G24530,AT3G50740,AT5G11920,AT1G73330,AT5G44570,AT1G59500,AT1G65300,AT3G56710,AT2G19990,AT5G48490,AT1G14870,AT1G13470,AT5G03350,AT2G23170,AT3G57240,AT1G14230,AT2G14610 CHRISTIANSON_ANAC102_KO_SEED-0.1%O2_UP Up-regulated in ANAC102 KO seeds treated with 0.1%O2 (Table S4 PubmedID:19176720) AT1G02920,AT3G02040,AT1G78850,AT5G45690,AT1G59870,AT5G50600,AT2G42000,AT4G36700,AT3G05260,AT1G73190,AT1G72100,AT2G23240,AT2G41730,AT1G05510,AT5G01520,AT1G70840,AT3G22500,AT2G02850,AT2G02120,AT2G43590,AT5G01300,AT5G66430,AT1G14950,AT4G31830,AT1G27990,AT5G66110,AT4G26740,AT2G42560,AT5G65530,AT5G42290,AT3G27660,AT5G45830,AT4G27160,AT2G38470,AT1G04560,AT1G80090,AT5G66780,AT2G29340,AT3G21380,AT3G56350,AT4G27170,AT1G47540,AT5G55240,AT4G29200,AT5G06760,AT5G45310,AT1G73020,AT1G17810,AT1G60680,AT3G22370,AT5G01600,AT5G39720,AT2G41280,AT2G41260,AT4G09600,AT4G38740,AT5G51210,AT1G29680,AT4G09610,AT1G69930,AT4G25580,AT3G26770,AT5G43770,AT4G37370,AT5G05320,AT2G43510,AT3G50980,AT4G03200,AT5G59170,AT2G35310,AT5G20050,AT4G27530,AT5G60760,AT3G11050,AT4G19390,AT4G22920,AT5G07360,AT1G59590,AT2G33520,AT5G65470,AT3G12955,AT1G02700,AT2G35300,AT2G18560,AT1G30860,AT1G24735,AT2G38905,AT5G25180,AT3G58450,AT1G23050,AT1G30500,AT1G01470,AT3G62090,AT1G31750 CHRISTIANSON_ANAC102_KO_SEED-0.1%O2_DN Down-regulated in ANAC102 KO seeds treated with 0.1%O2 (Table S4 PubmedID:19176720) AT1G10740,AT5G65210,AT4G36010,AT3G07650,AT2G44660,AT1G72150,AT4G01610,AT5G20270,AT4G09150,AT3G46830,AT3G14415,AT5G63140,AT1G07410,AT4G00790,AT3G62150,AT2G39890,AT5G03670,AT1G64970,AT5G53170,AT2G07731,AT4G21180,AT5G13030,AT3G14310,AT5G13740,AT5G02260,AT2G28080,AT5G60950,AT5G13870,AT1G64490,AT1G55810,AT3G45450,AT5G51550,AT1G78670,AT4G21410,AT4G30350,AT4G27830,AT1G73480,AT1G22110,AT2G46070,AT1G05570,AT4G37430,AT5G65760,AT1G10250,AT1G74940,AT1G70280,AT1G25530,AT5G63320,AT5G45650,AT4G25620,AT2G40220,AT4G05390,AT4G25100,AT1G02860,AT2G40610,AT4G19450,AT2G18700,AT5G01040,AT5G20250,AT3G16150,AT5G45670,AT5G14120,AT1G10150,AT3G59940,AT4G11310,AT2G19490,AT5G18360,AT5G03230,AT1G63180,AT1G66150,AT3G46670,AT2G37860,AT3G56360,AT5G57655,AT1G01640,AT1G08410,AT5G23860,AT1G02900,AT3G04730,AT2G21590,AT5G60680,AT5G04040,AT5G20830,AT5G64570,AT5G65860,AT2G32050,AT1G23460,AT5G44700,AT4G01026,AT2G24280,AT1G13080,AT3G23150,AT5G06570,AT4G12980,AT3G52060,AT5G03610,AT5G03720,AT2G45180,AT1G11580,AT1G80460,AT1G23870,AT1G02640,AT5G61440,AT1G43780,AT1G03090,AT2G36750,AT3G45300,AT1G47128,AT3G47340,AT2G26400,AT1G70290,AT5G47370,AT3G48360,AT5G63790 KAUFMANN_WT/AG-MUTANT_BOLTING_UP Up-regulated wt vs ag mutant after bolting (Table S2 PubmedID:19385720) AT2G42540,AT3G01500,AT2G24210,AT4G16590,AT1G01250,AT1G78440,AT1G29395,AT5G52310,AT3G59060,AT4G24000,AT4G28780,AT2G42530,AT4G25480,AT3G22840,AT2G13360,AT1G69570,AT1G75880,AT3G26290,AT2G01520,AT5G06510,AT3G46780,AT5G26660,AT3G47500,AT1G76080,AT1G11850,AT5G64770,AT4G25420,AT2G29670,AT2G29290,AT1G01600,AT3G63160,AT4G24350,AT2G40100,AT4G24140,AT1G01320,AT4G00870,AT1G58430,AT5G52390,AT2G17500,AT2G20570,AT5G24270,AT5G51810,AT1G04240,AT5G17860,AT5G20630,AT5G67390,AT5G49440,AT4G30960,AT2G44940,AT5G47240,AT4G14690,AT3G01060,AT5G17540,AT3G25180,AT5G10380,AT1G07430,AT2G42200,AT4G00050,AT4G16880,AT1G68520,AT2G04570,AT3G15360,AT1G78490,AT3G44450,AT4G39800,AT1G11700,AT4G37980,AT4G24120,AT4G34480,AT4G19530,AT3G45260,AT4G38970,AT2G40460,AT1G53230,AT2G36630,AT1G28570,AT3G55760,AT2G40130,AT3G05980,AT4G19380,AT1G70420,AT2G42690,AT1G07050,AT1G69690,AT1G44575,AT2G47890,AT4G22200,AT1G14280,AT2G32560,AT4G37800,AT4G11050,AT4G33040,AT5G58140,AT5G03760,AT5G45850,AT1G27370,AT1G75750,AT5G08370,AT5G20150,AT4G23600,AT1G73870,AT3G45140,AT3G45780,AT1G75460,AT1G68530,AT5G53210,AT1G33240,AT5G47610,AT4G04640,AT1G66980,AT2G23610,AT4G15550,AT1G23080,AT5G47820,AT1G49450,AT5G14230,AT1G03130,AT2G23760,AT5G55250,AT2G10940,AT2G36040,AT4G17695,AT1G04220,AT5G03720,AT1G61520,AT4G32980,AT1G20850,AT2G04800,AT3G53470,AT1G23020,AT1G31040,AT5G37600,AT5G25620,AT1G64900,AT1G65960,AT2G45600,AT4G36540,AT3G06035,AT1G76180,AT5G14740,AT1G13930,AT2G01150,AT5G61410,AT4G19430,AT4G04750,AT2G28870,AT5G28020,AT5G48880,AT1G78960,AT1G72180,AT4G16980,AT1G72610,AT1G68500,AT4G09900,AT3G55710,AT5G04490,AT2G35860,AT4G28250,AT1G13080,AT5G13630,AT3G23460,AT5G22430,AT2G29450,AT2G18350,AT5G64740,AT4G12980,AT3G59440,AT4G14400,AT2G31750,AT2G44130,AT4G30020,AT3G15030,AT1G05850,AT3G18710,AT1G10370,AT4G39840,AT1G01900,AT4G29060,AT4G17670,AT5G46270,AT2G02080,AT5G46240,AT1G78170,AT1G03160,AT5G49680,AT1G20440,AT1G12110,AT2G42800,AT3G11090,AT2G46600,AT1G35350,AT1G71960,AT4G24010,AT1G03600,AT4G03070,AT3G01140,AT2G31070,AT1G71040,AT2G30520,AT4G12910,AT3G14690,AT1G60060,AT2G41740,AT3G56710,AT3G63200,AT3G18050,AT5G62000,AT2G35820,AT5G45280,AT1G70140,AT3G17640,AT4G36370,AT5G59050,AT3G23410,AT3G13784,AT4G38620,AT3G62630,AT2G38110,AT5G63530,AT4G17660,AT2G29320,AT2G33800,AT3G04420,AT4G04490,AT2G42380,AT2G28470,AT4G34990,AT5G28030,AT1G77200,AT2G41330,AT1G64780,AT2G39730,AT5G61570,AT3G14560,AT5G57790,AT1G73805,AT3G50440,AT3G50650,AT2G39710,AT5G65890,AT5G46730,AT2G14080,AT3G16140,AT2G18730,AT2G15320,AT2G15580,AT3G21670,AT3G52180,AT5G23750,AT4G27900,AT4G34710,AT5G19340,AT2G36220,AT5G53370,AT4G10120,AT1G49230,AT2G36270,AT3G46970,AT2G20260,AT1G33170,AT2G40475,AT1G51440,AT4G36250,AT5G45650,AT1G51700,AT5G37020,AT2G21200,AT5G39785,AT4G28750,AT1G14580,AT4G22730,AT4G13180,AT2G45210,AT1G18410,AT3G51920,AT2G39130,AT4G21960,AT3G21190,AT1G72430,AT1G26590,AT2G41820,AT3G28340,AT2G34620,AT3G02100,AT2G22800,AT3G46630,AT2G40840,AT3G07470,AT1G54820,AT3G06590,AT3G02150,AT1G27360,AT2G36590,AT4G38070,AT4G36780,AT2G28510,AT3G61820,AT4G37870,AT5G23480,AT5G02260,AT3G59010,AT1G77490,AT4G20860,AT2G16750,AT1G27220,AT3G55360,AT4G39210,AT3G14020,AT2G27700,AT5G16190,AT2G47860,AT2G22970,AT4G39350,AT5G08640,AT5G57050,AT5G43150,AT4G16770,AT5G55620,AT2G26900,AT4G02410,AT4G01070,AT2G36940,AT4G35190,AT4G36360,AT5G41050,AT1G62380,AT5G12170,AT4G16990,AT3G12710,AT3G04730,AT1G58340,AT5G20280,AT1G47610,AT4G03280,AT3G49260,AT1G67750,AT2G24880,AT1G67590,AT1G29440,AT3G54950,AT1G76620,AT4G35220,AT1G23380,AT3G49670,AT2G18950,AT4G19420,AT1G64970,AT4G16780,AT1G07700,AT5G04470,AT2G47270,AT4G00370,AT5G43450,AT1G78070,AT5G60880,AT4G38530,AT2G02070,AT4G26690,AT3G23050,AT2G18300,AT5G48960,AT5G04940,AT2G45120,AT3G13810,AT1G56700,AT1G31550,AT3G03770,AT1G76580,AT1G72940,AT5G26230,AT4G39850,AT3G06080,AT2G46340,AT5G09870,AT1G25510,AT5G64550,AT5G62720,AT3G15020,AT5G38120,AT5G06530,AT3G17190,AT2G23120,AT2G28190,AT1G30330,AT3G56590,AT4G28770,AT3G10150,AT1G45230,AT4G15210,AT3G25905,AT5G58070,AT5G60600,AT4G14750,AT4G12970,AT2G04305,AT5G01810,AT5G59770,AT4G32020,AT5G04480,AT5G38610,AT4G38460,AT1G14840,AT2G30970,AT5G20700,AT4G34138,AT3G14067,AT3G52430,AT5G01380,AT4G32940,AT1G73600,AT4G30270,AT4G27730,AT5G23020,AT1G02850,AT1G44100,AT5G05690,AT4G26700,AT2G39890,AT4G18950,AT4G23820,AT1G01430,AT2G43680,AT3G13380,AT3G16360,AT3G27770,AT4G00740,AT1G75250,AT5G15850,AT2G44740,AT4G15920,AT4G30340,AT2G18450,AT4G40070,AT1G74970,AT3G20820,AT2G46450,AT1G69870,AT5G66770,AT4G28890,AT4G36170,AT3G03450,AT4G27520,AT4G34230,AT4G01800,AT1G19835,AT3G02730,AT4G17460,AT1G69120,AT1G61660,AT5G16430,AT2G42320,AT5G67280,AT5G09620,AT3G48450,AT5G48790,AT1G11840,AT5G51545,AT3G50930,AT1G29950,AT1G48330,AT1G30400,AT3G05030,AT3G51895,AT1G18360,AT4G35510,AT4G18970,AT5G11590,AT4G34120,AT1G20620,AT3G26190,AT5G51840,AT1G14350,AT5G64850,AT2G41530,AT5G57660,AT5G61420,AT5G35430,AT1G54410,AT4G21940,AT1G11330,AT3G18250,AT2G21380,AT1G02900,AT5G57800,AT2G30600,AT5G23940,AT3G24170,AT5G58560,AT3G22104,AT3G04060,AT1G70920,AT5G14700,AT4G03210,AT1G71970,AT1G28440,AT1G68570,AT4G22950,AT4G32460,AT5G65310,AT4G35900,AT5G64530,AT1G67050,AT3G61580,AT3G04290,AT5G22740,AT3G53150,AT3G15540,AT3G30340,AT3G50630,AT1G73480,AT4G38860,AT3G13060,AT5G61290,AT3G05690,AT1G21310,AT4G39080,AT4G16270,AT2G32430,AT3G54340,AT2G35290,AT3G25570,AT2G18980,AT2G43550,AT1G78970,AT2G41410,AT5G54620,AT2G17300,AT5G37960,AT5G01090,AT2G01670,AT5G01190,AT2G22990,AT4G18980,AT4G26200,AT1G62760,AT1G32550,AT5G53140,AT2G26910,AT4G25650,AT1G75710,AT5G47060,AT5G55470,AT1G55920,AT4G16140,AT4G34950,AT1G55260,AT4G10390,AT2G41540,AT5G53290,AT3G29020,AT2G31170,AT2G25490,AT1G73500,AT2G45910,AT2G41250,AT3G26700,AT4G08150,AT1G28580,AT3G52880,AT2G31400,AT5G64220,AT2G21170,AT5G48150,AT1G49600,AT1G16710,AT1G22030,AT5G62350,AT3G45640,AT2G15050,AT2G46980,AT1G26790,AT2G43820,AT3G05140,AT2G19580,AT5G17600,AT5G16030,AT5G42620,AT1G49740,AT4G36870,AT5G25610,AT4G27430,AT2G44610,AT1G21540,AT4G00820,AT4G03520,AT2G21880,AT1G78100,AT1G07280,AT1G62570,AT1G24260,AT5G49330,AT5G20660,AT5G45940,AT2G38540,AT5G65280,AT5G63040,AT1G25520,AT1G16510,AT5G52060,AT3G50270,AT3G61950,AT5G20680,AT3G50760,AT3G60440,AT4G22130,AT4G37320,AT2G45470,AT1G50020,AT2G45050,AT5G17310,AT2G45590,AT5G59820,AT4G34980,AT4G20780,AT3G60070,AT4G34760,AT1G68560,AT5G23720,AT4G03820,AT5G11060,AT2G33150,AT3G60740,AT3G53130,AT3G09870,AT2G26730,AT2G40480,AT3G48090,AT4G30150,AT1G02220,AT1G19920,AT1G55110,AT3G60760,AT4G16370,AT4G36920,AT2G34060,AT1G70940,AT1G29500,AT1G19800,AT4G27840,AT1G10000,AT4G18130,AT2G44660,AT5G19140,AT2G34640,AT2G33870,AT3G26990,AT5G47110,AT4G25470,AT3G18490,AT3G60690,AT5G55740,AT5G13460,AT1G07630,AT2G17290,AT3G02810,AT5G60200,AT4G35300,AT2G41180,AT4G35720,AT5G41070,AT5G43270,AT2G40810,AT4G38080,AT5G50360,AT3G23040,AT3G16240,AT2G23180,AT4G25080,AT1G12630,AT1G72500,AT3G25500,AT5G07010,AT5G25820,AT3G19380,AT2G22250,AT1G21100,AT3G13820,AT4G29080,AT2G38590,AT3G11900,AT5G19440,AT3G53420,AT5G07270,AT4G04960,AT1G71695,AT1G50650,AT1G22490,AT3G45680,AT3G13130,AT2G43290,AT5G47910,AT5G14180,AT4G04630,AT4G17880,AT3G58080,AT4G30090,AT2G03890,AT1G55120,AT4G34520,AT1G06650,AT3G11340,AT2G23430,AT3G17800,AT1G55210,AT4G30970,AT1G73390,AT1G30600,AT5G08530,AT1G26270,AT3G46660,AT5G53200,AT5G49480,AT5G28410,AT4G30160,AT5G18840,AT4G28025,AT5G47010,AT4G39040,AT3G61070,AT1G27930,AT2G42870,AT1G19330,AT2G47450,AT4G17340,AT5G64870,AT5G60850,AT1G77600,AT2G36910,AT1G29880,AT2G38170,AT2G35060,AT4G30410,AT4G27800,AT3G44380,AT5G58840,AT1G01420,AT5G67160,AT3G22440,AT3G14680,AT3G51950,AT4G18570,AT5G02410,AT2G46370,AT3G16785,AT3G22400,AT5G57150,AT5G57330,AT3G07340,AT5G20110,AT2G03710,AT5G59710,AT4G29610,AT1G74330,AT2G34790,AT5G06130,AT3G01370,AT3G07360,AT5G16000,AT4G21750,AT1G19000,AT5G39080,AT2G01680,AT3G62090,AT5G43810,AT4G35060,AT2G41870,AT2G21300,AT5G59030,AT2G44920,AT3G61630,AT1G75500,AT1G13950,AT2G31980,AT4G39480,AT2G45670,AT1G68830,AT3G60120,AT4G16390,AT3G11780,AT1G24530,AT1G17360,AT1G07080,AT3G07010,AT1G75820,AT5G64340,AT5G01340,AT4G34250,AT5G49720,AT2G28950,AT3G56200,AT1G77280,AT1G56560,AT5G54760,AT5G63050,AT3G14960,AT3G28860,AT4G27500,AT5G53120,AT5G57960,AT3G53260,AT1G21510,AT1G10950,AT2G41370,AT5G01600,AT1G53580,AT4G34050,AT5G44680,AT4G32290,AT1G17420,AT2G30530,AT2G24100,AT4G34680,AT3G23080,AT1G56680,AT3G02310,AT3G02250,AT4G01130,AT2G44670,AT1G19940,AT5G24320,AT5G18460,AT1G18730,AT3G18930,AT1G28140,AT1G21460,AT2G39010,AT5G02190,AT3G07320,AT5G07990,AT1G72410,AT5G19090,AT4G16730,AT2G27820,AT5G67290,AT3G07650,AT1G14910,AT3G27810,AT2G47200,AT2G35950,AT3G03840,AT3G43660,AT4G23496,AT2G36750,AT3G44990,AT4G21510,AT5G24000,AT5G47640,AT5G20840,AT3G03870,AT1G78670,AT5G15310,AT4G09890,AT4G39400,AT2G43060,AT4G26270,AT5G01410,AT5G59660,AT1G06000,AT1G23070,AT5G43410,AT4G19200,AT1G07150,AT4G18975,AT5G64030,AT3G17080,AT1G70730,AT5G65670,AT5G07310,AT3G18070,AT4G37240,AT5G24880,AT1G15530,AT1G69440,AT4G17245,AT4G19120,AT4G01530,AT2G27810,AT3G13960,AT2G37430,AT5G53000,AT2G48030,AT2G26260,AT1G56030,AT1G20650,AT2G25850,AT5G64080,AT5G46690,AT2G39230,AT2G25430,AT2G36050,AT5G17230,AT1G53520,AT3G59950,AT2G26500,AT4G16740,AT2G31230,AT2G37140,AT1G43920,AT2G31390,AT2G38120,AT5G24830,AT5G47500,AT2G39930,AT5G18120,AT3G61550,AT1G06790,AT2G43320,AT4G12460,AT4G39390,AT1G32650,AT5G03555,AT5G65940,AT3G01360,AT2G34150,AT5G65700,AT2G33570,AT5G10030,AT2G36830,AT2G39480,AT3G22970,AT1G21430,AT1G43710,AT4G22570,AT4G36740,AT2G31180,AT2G30250,AT1G31650,AT1G65295,AT2G24280,AT4G30470,AT4G28530,AT4G01026,AT5G66880,AT5G22620,AT2G38180,AT4G02050,AT2G45730,AT1G09750,AT3G54220,AT1G70230,AT2G33180,AT4G18030,AT1G51160,AT2G38290,AT1G33560,AT5G59540,AT3G28050,AT5G04830,AT4G38690,AT3G50610,AT2G36430,AT3G15350,AT4G34650,AT1G72280,AT4G01940,AT2G30240,AT2G25090,AT4G36550,AT2G46360,AT3G49220,AT5G61970,AT3G56660,AT4G29720,AT5G13740,AT4G17240,AT4G28400,AT4G11280,AT4G23990,AT1G11320,AT4G27720,AT4G13800,AT1G63420,AT3G44820,AT5G47520,AT5G25180,AT5G57670,AT1G67730,AT1G30825,AT3G21750,AT2G45900,AT5G07240,AT1G07890,AT4G16280,AT4G12730,AT4G24790,AT5G17260,AT2G44230,AT3G51850,AT3G28040,AT2G30490,AT3G45610,AT2G41010,AT1G48480,AT1G73840,AT4G29840,AT4G20880,AT3G54820,AT1G51400,AT5G40470,AT1G72310,AT2G44480,AT5G47230,AT4G15440,AT2G20700,AT5G47120,AT4G19710,AT4G19050,AT1G42540,AT4G27240,AT5G11890,AT2G39410,AT2G45970,AT3G51550,AT2G47730,AT5G12900,AT5G07700,AT1G64740,AT3G54430,AT4G38840,AT3G44440,AT2G01760,AT3G54810,AT2G16410,AT1G13110,AT5G46760,AT4G20510,AT4G16260,AT4G31960,AT2G45790,AT2G20320,AT1G18670,AT1G27210,AT3G03480,AT2G21780,AT4G15340,AT3G56370,AT1G53830,AT1G64640,AT2G42330,AT2G01420,AT2G40435,AT1G14920,AT4G11820,AT5G48250,AT2G16690,AT5G63370,AT4G17890,AT5G09810,AT5G14210,AT1G77930,AT5G15160,AT2G47430,AT3G62270,AT1G15360,AT3G17100,AT2G47000,AT5G44260,AT2G43350,AT2G44030,AT5G12040,AT2G32090,AT4G28760,AT5G18830,AT1G62990,AT4G30130,AT2G44810,AT2G21340,AT2G41900,AT2G31360,AT2G45310,AT2G15900,AT1G19650,AT4G37590,AT3G26440,AT1G76890,AT1G22370,AT3G50860,AT4G16444,AT5G49350,AT5G13590,AT3G56400,AT2G40750,AT3G15095,AT5G08130,AT3G17520,AT5G13750,AT5G64250,AT4G26120,AT5G63900,AT2G44830,AT1G10410,AT5G07800,AT4G00880,AT3G15850,AT1G22040,AT5G46510,AT1G04690,AT4G18710,AT1G01830,AT4G22830,AT1G08190,AT2G34480,AT5G52400,AT3G06860,AT5G05150,AT4G13840,AT2G22720,AT5G59070,AT2G14210,AT2G46560,AT2G46240,AT5G05820,AT5G16160,AT2G45430,AT4G21340,AT3G03630,AT3G50740,AT4G23260,AT2G43000,AT1G22160,AT3G57540,AT4G38190,AT2G45680,AT2G30480,AT3G52470,AT4G09100,AT4G36470,AT3G16910,AT2G30090,AT1G72175,AT1G07420,AT4G37790,AT4G39520,AT3G12120,AT5G12890,AT3G09820,AT3G08590,AT3G02690,AT2G32520,AT3G11920,AT4G18020,AT3G54660,AT4G36220,AT5G45950,AT5G15980,AT1G78040,AT1G55850,AT5G02580,AT5G20830,AT4G24670,AT3G13510,AT5G59010,AT5G54700,AT1G16150,AT3G01880,AT3G10040,AT5G11730,AT3G21610,AT2G22760,AT4G03560,AT5G47370,AT1G65730,AT5G13710,AT1G01660,AT1G32660,AT1G30090,AT3G27960,AT1G51460,AT1G73080,AT1G15580,AT5G03630,AT5G24520,AT4G32700,AT3G55870,AT5G55960,AT3G19070,AT5G04810,AT3G20460,AT3G15500,AT2G22125,AT3G09530,AT5G42290,AT2G28540,AT4G10770,AT4G34580,AT2G40910,AT1G18890,AT5G39610,AT5G14220,AT2G03530,AT4G39980,AT3G15890,AT1G01490,AT4G30210,AT1G01540,AT5G57740,AT5G67310,AT5G25160,AT1G08920,AT2G38610,AT1G31830,AT2G13570,AT1G30620,AT2G20290,AT1G15370,AT3G61250,AT5G16560,AT4G15260,AT4G22920,AT1G12150,AT2G41470,AT1G74960,AT1G55610,AT4G13830,AT4G31590,AT2G18010,AT3G09440,AT2G41290,AT1G61667,AT5G36880,AT5G59580,AT1G11600,AT5G15800,AT3G62700,AT5G19040,AT4G09620,AT4G32060,AT5G64905,AT4G18820,AT5G28640,AT3G19390,AT5G56040,AT5G19100,AT4G16650,AT5G22570,AT1G17710,AT2G01500,AT2G47190,AT1G70100,AT2G26250,AT5G07200,AT4G26540,AT3G06140,AT2G46140,AT1G67300,AT1G16950,AT4G23490,AT1G04250,AT1G46840,AT4G05370,AT4G23980,AT5G17840,AT2G30430,AT5G48930,AT5G26010,AT4G21440,AT5G51260,AT2G41660,AT3G01080,AT2G22510,AT2G24790,AT4G16750,AT5G65650,AT3G11690,AT4G01720,AT3G12930,AT1G72960,AT5G10090,AT2G21970,AT2G18080,AT4G28490,AT3G52460,AT5G41900,AT5G53450,AT3G56490,AT4G33580,AT2G34200,AT1G69370,AT5G66920,AT2G46420,AT2G40400,AT1G05680,AT5G47790,AT3G08640,AT2G29970,AT1G08510,AT4G25490,AT5G51560,AT4G02600,AT1G56580,AT2G39220,AT3G49580,AT3G11110,AT5G06660,AT3G11760,AT2G02810,AT1G77740,AT5G11990,AT3G49950,AT3G54010,AT5G15580,AT5G62400,AT2G46300,AT3G06150,AT4G26080,AT3G50750,AT1G25330,AT2G16870,AT4G28300,AT5G01800,AT4G16820,AT2G17230,AT2G27690,AT5G26340,AT2G34540,AT1G07270,AT4G14210,AT1G35780,AT2G37160,AT3G14340,AT1G09440,AT2G38920,AT5G21090,AT1G68720,AT1G11310,AT4G14770,AT5G43260,AT5G01880,AT5G62430,AT1G49510,AT4G27250,AT1G04400,AT2G43330,AT2G21140,AT4G13100,AT2G04880,AT1G56600,AT2G25180,AT2G39330,AT5G58080,AT4G00450,AT3G16870,AT1G43650,AT4G27420,AT3G06060,AT1G79970,AT2G42880,AT3G08850,AT5G62170,AT2G31880,AT1G49030,AT4G03390,AT3G53550,AT4G38520,AT2G04380,AT3G60280,AT5G35550,AT3G04090,AT3G12180,AT2G41880,AT3G14100,AT3G04470,AT3G05260,AT5G07920,AT1G10060,AT3G55370,AT5G14120,AT1G22540,AT4G18350,AT5G10970,AT2G33310,AT2G30320,AT1G21980,AT3G27540,AT3G06570,AT2G41940,AT2G19620,AT2G32020,AT3G60030,AT4G30890,AT1G12580,AT2G20240,AT1G22810,AT1G07160,AT4G33440,AT1G07680,AT1G60810,AT3G50240,AT2G47060,AT3G06850,AT5G03700,AT3G16570,AT5G06700,AT5G23090,AT4G22580,AT1G63950,AT1G60940,AT5G17870,AT2G35760,AT3G23490,AT1G23980,AT3G01150,AT4G01410,AT3G25250,AT4G10310,AT2G32970,AT3G48750,AT5G62570,AT5G52120,AT1G72700,AT1G55270,AT1G04530,AT2G23770,AT5G24010,AT3G13690,AT3G15260,AT5G65630,AT4G36910,AT4G37080,AT3G10560,AT4G30000,AT5G10560,AT3G01310,AT2G20800,AT2G40150,AT4G32930,AT5G47330,AT1G75810,AT5G57710,AT3G05360,AT3G55960,AT5G51070,AT3G06130,AT2G35720,AT3G59430,AT4G13000,AT4G13630,AT5G67430,AT3G46620,AT3G07680,AT3G27410,AT2G46220,AT4G24020,AT1G20010,AT3G27010,AT3G14310,AT5G58930,AT1G63500,AT5G19410,AT5G40170,AT5G15110,AT4G35180,AT2G45960,AT2G37720,AT4G11350,AT1G17500,AT1G07540,AT5G50450,AT1G29140,AT4G30996,AT4G23250,AT2G30360,AT1G75230,AT5G23330,AT5G52660,AT5G13220,AT3G56700,AT4G05150,AT3G19290,AT3G30160,AT5G38520,AT4G00900,AT5G46250,AT2G39360,AT4G26520,AT4G02260,AT5G15350,AT5G58530,AT3G04080,AT3G16830,AT1G70710,AT5G61380,AT3G07020,AT4G39280,AT4G10360,AT3G50530,AT3G19970,AT3G62660,AT1G74450,AT4G23030,AT3G18830,AT5G60840,AT2G01180,AT1G79420,AT5G23000,AT5G49130,AT5G23730,AT3G49140,AT1G32210,AT1G78260,AT4G03110,AT3G63070,AT1G51140,AT5G61960,AT1G25420,AT5G03380,AT3G23820,AT3G57280,AT3G50560,AT4G08740,AT4G00335,AT3G03260,AT3G51400,AT2G02820,AT5G54200,AT5G47180,AT2G32710,AT4G00950,AT3G13740,AT5G13280,AT1G76880,AT5G65040,AT3G02550,AT4G37940,AT2G22810,AT4G15620,AT2G36030,AT2G03070,AT5G56290,AT5G62030,AT3G57440,AT3G63180,AT5G61670,AT1G13280,AT2G46870,AT3G13520,AT3G15530,AT2G18670,AT1G04430,AT1G13260,AT1G49720,AT3G46600,AT1G28200,AT5G25290,AT5G41100,AT4G34490,AT3G52840,AT2G28840,AT1G79630,AT1G07210,AT5G44570,AT5G39040,AT3G47620,AT3G61310,AT2G24260,AT4G37780,AT3G45950,AT1G19870,AT1G28410,AT5G15860,AT1G27120,AT2G46860,AT5G16110,AT3G55140,AT4G02780,AT3G50340,AT5G60710,AT1G26160,AT3G15280,AT3G06870,AT5G48200,AT3G10985,AT4G31820,AT4G29940,AT1G04610,AT3G21270,AT4G17830,AT3G52940,AT3G21430,AT3G18220,AT3G17040,AT3G52800,AT1G56720,AT2G41930,AT5G62360,AT3G57920,AT3G62760,AT1G09160,AT4G38940,AT2G36320,AT3G60550,AT1G70790,AT3G14380,AT3G06190,AT1G75390,AT5G67480,AT4G04210,AT1G05230,AT1G71710,AT5G04720,AT5G60790,AT2G40110,AT1G75490,AT4G23760,AT1G21090,AT3G10760,AT2G34650,AT5G65380,AT3G04510,AT3G54320,AT1G05570,AT1G28170,AT1G61890,AT3G26510,AT2G17480,AT2G30980,AT4G12570,AT5G11380,AT5G57440,AT5G01830,AT1G18650,AT3G22160,AT2G33810,AT2G34320,AT2G45290,AT3G07540,AT4G27890,AT4G23670,AT2G19450,AT3G04920,AT5G56510,AT5G37300,AT1G69420,AT2G37950,AT3G49880,AT4G03400,AT3G61960,AT3G27800,AT5G27150,AT1G54510,AT1G53430,AT2G22330,AT4G32030,AT3G28920,AT2G45340,AT4G18550,AT3G52770,AT5G60980,AT4G26640,AT5G56220,AT1G09520 KAUFMANN_WT/AG-MUTANT_BOLTING_DN Down-regulated wt vs ag mutant after bolting (Table S2 PubmedID:19385720) AT3G14000,AT4G28910,AT3G60400,AT1G74670,AT3G15810,AT5G05190,AT1G28050,AT3G18290,AT5G25830,AT1G76590,AT5G25460,AT5G52960,AT5G06790,AT4G30790,AT5G13400,AT1G69410,AT4G28330,AT1G68100,AT3G20015,AT1G19340,AT1G68550,AT5G06570,AT2G34770,AT1G18610,AT2G28320,AT3G49660,AT1G12550,AT3G23030,AT3G17630,AT1G08660,AT3G21100,AT4G22010,AT4G33240,AT5G16210,AT1G70370,AT5G23210,AT5G11160,AT1G20890,AT4G16670,AT5G53190,AT5G59880,AT2G28050,AT4G37510,AT1G63090,AT3G02170,AT2G27830,AT1G75090,AT5G63800,AT5G09730,AT2G34510,AT3G28720,AT4G32720,AT2G42300,AT3G15580,AT1G22180,AT5G19350,AT5G25220,AT3G52710,AT2G03730,AT1G70280,AT2G30140,AT3G44950,AT2G21580,AT4G22310,AT3G57120,AT5G14640,AT2G16700,AT4G23860,AT5G47220,AT5G50860,AT2G39260,AT3G15860,AT3G24520,AT3G02125,AT3G26750,AT5G46570,AT1G11660,AT2G45160,AT3G15200,AT4G12420,AT4G32300,AT4G29190,AT1G10910,AT3G09000,AT4G13510,AT2G47170,AT2G41220,AT4G24540,AT3G44610,AT3G58830,AT4G28240,AT5G52900,AT4G04470,AT5G11640,AT3G18540,AT1G71030,AT3G50850,AT3G26744,AT5G58450,AT1G67560,AT5G16480,AT4G33430,AT1G71930,AT5G62940,AT4G02930,AT5G14370,AT1G21670,AT5G28240,AT5G03140,AT4G35910,AT5G17760,AT3G10970,AT1G11710,AT3G46010,AT5G14880,AT2G46330,AT1G67890,AT2G40610,AT3G05220,AT2G26040,AT2G18900,AT2G41500,AT1G23820,AT4G32400,AT4G12430,AT1G78010,AT2G19570,AT5G66560,AT3G60080,AT2G25200,AT2G39290,AT2G27550,AT5G50340,AT3G12920,AT5G43760,AT5G06960,AT2G23290,AT3G57050,AT3G52910,AT1G11390,AT1G19300,AT1G19830,AT1G74440,AT5G51120,AT4G23200,AT4G20440,AT5G63520,AT3G12280,AT2G24800,AT2G37480,AT4G14615,AT3G49350,AT1G04830,AT5G46710,AT3G10340,AT2G33330,AT1G55325,AT4G23460,AT1G68480,AT5G13170,AT3G15210,AT2G39980,AT1G47330,AT5G03370,AT5G66320,AT3G09030,AT5G08510,AT5G08139,AT5G15410,AT2G35700,AT5G67180,AT3G53440,AT1G70780,AT1G09850,AT3G48550,AT4G16040,AT1G47870,AT2G33350,AT1G20330,AT5G26940,AT1G12460,AT5G17460,AT1G17145,AT5G48800,AT4G34770,AT1G12430,AT2G05290,AT1G48260,AT2G17370,AT1G18700,AT1G68060,AT2G22450,AT3G24550,AT5G57130,AT4G33180,AT1G50590,AT5G66800,AT4G17490,AT2G41810,AT5G39250,AT1G09530,AT1G01130,AT1G53160,AT3G07760,AT5G65120,AT2G40620,AT5G13100,AT3G19100,AT2G15090,AT5G23250,AT5G06440,AT2G06050,AT5G17850,AT1G21270,AT1G19880,AT1G48320,AT5G66700,AT4G19440,AT5G41920,AT3G14430,AT1G66840,AT4G13710,AT1G78130,AT2G36410,AT3G57550,AT5G43700,AT5G62760,AT2G46520,AT5G25170,AT1G78080,AT2G40280,AT5G45800,AT3G53960,AT2G30150,AT3G08030,AT3G57030,AT2G42580,AT3G14240,AT3G06030,AT2G22530,AT3G17310,AT5G40200,AT1G33270,AT2G32010,AT5G47570,AT1G70540,AT3G14220,AT5G10920,AT3G55000,AT3G11420,AT3G53380,AT3G20660,AT1G21480,AT2G39170,AT3G19540,AT3G57810,AT3G12940,AT1G14620,AT4G24550,AT4G38710,AT4G09630,AT2G34555,AT1G76170,AT2G48040,AT3G16010,AT3G58620,AT4G24780,AT3G24830,AT4G38960,AT3G08620,AT3G17980,AT5G03790,AT2G18940,AT2G24360,AT3G15090,AT3G53800,AT5G56780,AT1G53090,AT4G01090,AT5G18310,AT2G21185,AT3G01560,AT3G04240,AT5G09460,AT1G64670,AT3G07390,AT3G60510,AT4G17370,AT1G07090,AT4G13530,AT5G15230,AT2G45690,AT1G75640,AT1G73630,AT5G49510,AT5G14420,AT4G17230,AT2G40880,AT1G49630,AT1G79050,AT1G10150,AT4G29700,AT1G54090,AT4G31410,AT4G13340,AT2G30780,AT5G13950,AT5G59960,AT3G44720,AT1G48630,AT3G53460,AT4G39990,AT3G19130,AT3G12680,AT2G44570,AT2G24640,AT5G07620,AT4G16690,AT2G29340,AT4G34870,AT4G34620,AT5G07290,AT2G40800,AT3G19570,AT1G54180,AT2G28305,AT2G21660,AT2G21220,AT3G57410,AT5G08330,AT3G26890,AT2G34810,AT2G01190,AT3G02070,AT2G41630,AT1G64620,AT2G36400,AT3G16470,AT5G59730,AT4G00650,AT4G30940,AT3G17950,AT2G26170,AT3G54480,AT1G72990,AT1G54210,AT3G61880,AT5G37540,AT4G00360,AT1G55510,AT5G21105,AT5G13310,AT1G03440,AT4G12300,AT2G11810,AT5G67350,AT1G50430,AT4G23810,AT4G37640,AT5G15060,AT3G52500,AT3G27210,AT5G22460,AT1G01470,AT3G16370,AT4G39150,AT3G48570,AT3G14010,AT3G55620,AT2G25930,AT1G51090,AT1G64710,AT3G12980,AT2G39650,AT2G48010,AT1G72680,AT1G53165,AT1G05550,AT5G62640,AT1G05170,AT4G18800,AT4G22190,AT3G57220,AT2G41640,AT1G80500,AT1G77220,AT2G29090,AT5G63140,AT4G23740,AT2G28610,AT2G26690,AT1G79000,AT3G11700,AT5G06860,AT2G32480,AT1G07220,AT3G03990,AT3G12150,AT5G26790,AT2G26580,AT4G01330,AT2G01940,AT5G65430,AT2G43010,AT4G29260,AT1G45130,AT1G18740,AT3G14370,AT4G28540,AT3G54940,AT3G16180,AT4G24500,AT5G51460,AT4G30860,AT4G24740,AT1G27040,AT5G53760,AT2G01980,AT5G67360,AT5G59140,AT1G50420,AT3G53940,AT5G49170,AT1G21740,AT2G18970,AT1G49730,AT3G26810,AT3G14770,AT4G14900,AT4G33666,AT3G17860,AT2G13610,AT2G27775,AT5G18070,AT2G42600,AT4G30350,AT4G39100,AT4G36150,AT5G05800,AT3G60530,AT1G78610,AT2G45070,AT2G36840,AT2G39700,AT3G11850,AT1G55255,AT1G68790,AT4G36890,AT2G45640,AT4G36700,AT5G20540,AT1G70350,AT1G63690,AT3G18210,AT5G50350,AT3G12560,AT3G04910,AT4G11560,AT5G01350,AT3G27260,AT5G03270,AT4G20170,AT4G25280,AT4G15420,AT1G15750,AT3G06500,AT4G32340,AT4G11410,AT1G12310,AT3G06450,AT5G02440,AT4G22850,AT3G60220,AT3G24630,AT5G62880,AT2G36470,AT1G12330,AT1G29630,AT2G31740,AT3G15770,AT1G05470,AT5G07360,AT3G03950,AT4G28290,AT1G70700,AT5G20180,AT3G55030,AT1G47530,AT2G30000,AT2G38000,AT1G75400,AT3G27470,AT1G75510,AT3G10120,AT1G77630,AT5G03280,AT5G58570,AT3G24010,AT2G41430,AT1G79160,AT3G01980,AT5G53510,AT5G66310,AT2G37630,AT4G24760,AT5G53150,AT3G01820,AT5G09740,AT2G44980,AT5G62670,AT3G27420,AT1G03610,AT4G36030,AT3G56880,AT3G17120,AT5G52430,AT1G77890,AT5G55910,AT1G72450,AT5G66200,AT4G36750,AT5G11360,AT5G24890,AT2G22480,AT5G57550,AT2G06255,AT5G55920,AT1G80420,AT1G07170,AT1G19110,AT3G18840,AT1G18210,AT2G42620,AT2G23450,AT2G40540,AT1G05410,AT3G06750,AT2G20060,AT3G44735,AT3G09780,AT4G13520,AT4G14930,AT4G36380,AT5G53400,AT1G03870,AT5G11420,AT5G25810,AT1G52760,AT3G13000,AT2G28880,AT2G38820,AT3G60640,AT2G34710,AT2G41560,AT2G26710,AT1G20840,AT5G47000,AT1G69030,AT3G19270,AT1G67480,AT5G12930,AT3G16720,AT3G62160,AT5G54580,AT3G62970,AT4G19170,AT2G44840,AT3G13570,AT4G33300,AT5G14710,AT2G43400,AT3G14180,AT1G71870,AT5G18640,AT4G28270,AT3G54680,AT1G08315,AT4G21200,AT1G07570,AT5G03520,AT1G74030,AT2G16440,AT5G24910,AT4G25840,AT4G33950,AT5G59780,AT3G19515,AT2G28930,AT4G16620,AT2G33170,AT5G45310,AT4G15610,AT1G35510,AT1G73250,AT4G04830,AT2G19790,AT1G18800,AT4G18700,AT2G46510,AT1G10550,AT5G64330,AT3G50070,AT5G57100,AT3G03210,AT2G15420,AT2G40140,AT1G65950,AT2G37390,AT4G27270,AT2G22840,AT5G57570,AT4G17950,AT4G16610,AT2G41705,AT2G16400,AT5G10870,AT3G17590,AT2G46270,AT2G42790,AT1G18620,AT5G19730,AT5G54380,AT2G37080,AT3G53210,AT1G15120,AT2G33210,AT1G69770,AT5G62860,AT2G34780,AT1G78030,AT5G62020,AT5G03130,AT2G42290,AT1G11440,AT3G63220,AT2G37940,AT5G35560,AT2G40970,AT3G51670,AT4G00810,AT3G07780,AT2G40740,AT4G35780,AT4G37670,AT1G75180,AT5G14760,AT1G14720,AT4G31500,AT2G11000,AT4G36020,AT4G37740,AT1G01510,AT2G24240,AT5G54400,AT3G13620,AT4G36050,AT4G26620,AT2G39660,AT1G49660,AT3G09980,AT1G72650,AT2G24050,AT4G39900,AT1G69310,AT5G15320,AT2G04550,AT5G14550,AT1G20510,AT2G39550,AT5G13140,AT5G60450,AT1G11210,AT4G15480,AT2G47780,AT3G49810,AT1G71130,AT2G26680,AT3G53810,AT5G64410,AT2G37050,AT2G25460,AT3G14990,AT5G54850,AT3G16730,AT3G14205,AT1G62830,AT3G17330,AT3G21280,AT2G22660,AT4G28040,AT2G17560,AT2G45440,AT3G53350,AT5G55700,AT1G08130,AT4G33910,AT3G02180,AT1G09575,AT5G27320,AT3G04960,AT1G33250,AT4G24370,AT1G77750,AT1G03300,AT1G72750,AT3G57880,AT3G61620,AT5G08080,AT2G30380,AT4G38810,AT1G22330,AT3G09920,AT5G14580,AT1G63130,AT3G03150,AT5G23430,AT4G34590,AT5G22400,AT4G27880,AT2G01410,AT5G41890,AT4G34260,AT3G25670,AT5G07580,AT4G39260,AT5G13330,AT4G27510,AT4G36900,AT5G02450,AT5G57480,AT3G51450,AT3G06760,AT2G30810,AT5G51040,AT2G44820,AT5G43870,AT3G57660,AT5G52510,AT2G36960,AT4G29340,AT4G30520,AT4G31800,AT4G25730,AT4G14500,AT1G32700,AT3G13800,AT3G55130,AT5G25280,AT1G06160,AT4G36040,AT1G62660,AT2G02470,AT1G23100,AT1G68840,AT3G24670,AT5G23290,AT3G47570,AT4G21870,AT2G01140,AT3G43810,AT1G54120,AT3G06490,AT3G57800,AT2G36900,AT5G62280,AT1G08220,AT1G21810,AT3G62650,AT4G16520,AT1G05100,AT5G60680,AT3G61970,AT1G03730,AT3G61640,AT4G24660,AT4G17870,AT1G02070,AT1G26870,AT5G53830,AT2G37640,AT3G29370,AT4G25990,AT4G22780,AT4G19400,AT1G14685,AT1G58080,AT3G60320,AT3G50700,AT4G27060,AT1G23710,AT4G14590,AT2G36380,AT2G44120,AT1G68130,AT5G60910,AT1G01120,AT5G07370,AT4G38440,AT2G46260,AT3G11270,AT3G62710,AT2G28350,AT5G14080,AT2G47440,AT5G67300,AT1G70510,AT1G74380,AT2G01850,AT5G12050,AT5G10010,AT1G76900,AT3G55850,AT3G51660,AT1G76950,AT1G27050,AT3G60540,AT4G30200,AT3G55730,AT3G08760,AT2G33360,AT3G01680,AT3G06840,AT1G24180,AT1G67340,AT3G61150,AT5G23850,AT1G61350,AT1G02840,AT2G16940,AT5G48970,AT1G09070,AT1G69270,AT3G28007,AT3G54920,AT2G33320,AT1G06050,AT2G16500,AT1G13195,AT4G01460,AT1G75200,AT1G14730,AT2G21180,AT4G35905,AT1G22360,AT2G21210,AT4G29735,AT4G23000,AT4G14815,AT4G31550,AT1G48620,AT1G56660,AT3G30775,AT2G40430,AT2G42040,AT5G58900,AT2G34340,AT5G60570,AT1G06840,AT5G57070,AT1G10470,AT1G18440,AT1G02060,AT1G59640,AT4G37445,AT5G42650,AT5G09440,AT3G26680,AT4G37250,AT3G05640,AT5G16070,AT1G14770,AT4G02720,AT1G50290,AT4G16442,AT5G13180,AT2G41550,AT1G76370,AT1G57680,AT4G37380,AT4G39830,AT1G20540,AT2G21130,AT3G11410,AT4G39640,AT3G02110,AT3G49930,AT1G77850,AT5G59600,AT4G04040,AT4G25835,AT2G17870,AT5G62440,AT1G49320,AT5G53900,AT1G11260,AT1G68580,AT1G67320,AT4G21560,AT5G10980,AT3G52450,AT4G35620,AT2G31130,AT1G31910,AT2G43100,AT4G22590,AT5G25240,AT2G47260,AT2G19780,AT3G23740,AT2G45830,AT4G18880,AT1G32920,AT4G26000,AT3G01430,AT5G60190,AT2G37340,AT4G36970,AT1G67530,AT3G14750,AT3G28910,AT1G12830,AT2G14750,AT5G66610,AT4G25630,AT3G57870,AT5G65300,AT5G01520,AT2G40240,AT4G22250,AT5G53650,AT3G10525,AT3G11600,AT4G32870,AT3G06890,AT1G68400,AT1G15660,AT5G66730,AT2G34160,AT4G25610,AT1G69760,AT2G23690,AT5G28770,AT3G47610,AT1G27100,AT2G17540,AT5G40340,AT4G27450,AT5G61330,AT1G58360,AT4G17810,AT3G60200,AT2G19810,AT5G65880,AT3G56070,AT1G79840,AT4G37580,AT1G54650,AT1G79060,AT5G53550,AT5G41860,AT3G60900,AT4G26140,AT3G43270,AT4G37260,AT4G02440,AT5G64260,AT3G22120,AT1G02660,AT4G20260,AT1G77450,AT1G11000,AT2G27490,AT5G06720,AT5G48540,AT1G22335,AT1G22460,AT4G30490,AT1G22400,AT2G01860,AT1G68360,AT1G15270,AT5G36960,AT1G71440,AT1G61740,AT5G44670,AT2G22540,AT2G22410,AT4G08950,AT1G53760,AT1G02190,AT5G56980,AT1G25230,AT1G15100,AT3G25585,AT2G19930,AT2G46530,AT2G42280,AT1G05710,AT1G73370,AT1G72520,AT1G23860,AT5G01720,AT5G52170,AT4G12390,AT3G63460,AT2G01930,AT1G30490,AT1G32120,AT2G37770,AT1G76360,AT1G21060,AT5G50915,AT4G00530,AT3G22420,AT5G48870,AT5G67110,AT5G05600,AT4G24240,AT1G09500,AT5G53160,AT3G47210,AT5G59740,AT5G40460,AT3G48690,AT5G11000,AT3G58780,AT3G50660,AT5G02890,AT4G30700,AT2G33860,AT5G07180,AT4G26600,AT3G10910,AT3G10630,AT2G38860,AT5G10290,AT1G14890,AT3G10020,AT5G13090,AT1G74430,AT2G30990,AT4G14430,AT1G10020,AT3G60490,AT2G28400,AT5G54640,AT1G33060,AT5G02760,AT3G58650,AT4G30800,AT5G02180,AT5G11950,AT3G57040,AT1G01290,AT1G09250,AT4G27652,AT2G44500,AT1G76420,AT2G46490,AT3G12060,AT1G10070,AT5G17800,AT4G23060,AT3G08720,AT5G25210,AT2G44910,AT5G40890,AT5G06250,AT4G11530,AT1G30040,AT3G49790,AT5G61440,AT4G00150,AT5G61850,AT5G24530,AT2G28120,AT4G38680,AT3G53280,AT2G34870,AT4G14130,AT2G47990,AT4G33980,AT5G48650,AT2G31810,AT3G60520,AT3G59940,AT3G19680,AT5G11310,AT4G34000,AT1G52000,AT5G07770,AT3G13640,AT2G23700,AT1G75580,AT2G39705,AT1G15110,AT2G45660,AT4G28180,AT5G61590,AT1G66140,AT5G62230,AT2G34070,AT5G03680,AT2G22680,AT1G06080,AT3G13790,AT5G57785,AT2G27050,AT5G67190,AT4G39070,AT5G61600,AT4G39030,AT4G25260,AT2G40000,AT4G36410,AT3G63240,AT5G66940,AT1G75540,AT5G42630,AT1G69850,AT5G10100,AT3G55560,AT1G06180,AT1G25560,AT2G14560,AT5G57780,AT1G08500,AT5G63180,AT5G58650,AT3G04640,AT5G12330,AT5G46330,AT1G19050,AT3G62610,AT3G13682,AT2G23170,AT2G25900,AT4G37890,AT1G52890,AT5G48170,AT5G57120,AT5G65660,AT5G04770,AT3G48520,AT3G63010,AT1G69295,AT1G23390,AT2G28550,AT1G13700,AT5G02540,AT3G43430,AT3G48350,AT3G55980,AT1G11120,AT5G18670,AT2G24550,AT4G38470,AT2G45170,AT4G26090,AT1G75300,AT3G57390,AT2G03980,AT1G69490,AT1G78460,AT2G21060,AT5G60400,AT4G24150,AT1G15670,AT2G19800,AT1G24625,AT5G02220,AT5G51910,AT2G32150,AT2G44080,AT1G12080,AT3G28220,AT1G19180,AT1G75450,AT1G26930,AT1G75430,AT5G57340,AT1G49620,AT5G35770,AT5G67060,AT3G10720,AT5G50210,AT2G36080,AT4G02670,AT2G47560,AT2G37210,AT2G05380,AT5G45340,AT1G80840,AT3G11580,AT1G44350,AT3G02140,AT3G25640,AT2G42830,AT5G19120,AT5G47560,AT2G23320,AT5G10170,AT4G27260,AT2G16660,AT2G38530,AT1G64380,AT2G41070,AT2G21650,AT3G52480,AT3G07350,AT5G17980,AT5G13790,AT3G23130,AT5G49360,AT1G79700,AT4G24050,AT2G39350,AT1G25550,AT4G28703,AT1G70290,AT4G28560,AT3G15630,AT5G20250,AT4G37610,AT4G29770,AT3G48360,AT4G24040,AT2G17880,AT2G33830,AT4G18960,AT4G27330,AT1G29270 KAUFMANN_WT/AG-MUTANT-STAGE12_UP Up-regulated wt vs ag mutant Stage12 (Table S2 PubmedID:19385720) AT5G09620,AT4G17890,AT3G26440,AT2G27775,AT1G71440,AT2G45640,AT2G20060,AT5G57570,AT2G39480,AT4G38070,AT3G12280,AT1G52000,AT4G22310,AT1G09070,AT5G28410,AT5G63370,AT4G14615,AT1G74450,AT1G69770,AT4G32400,AT5G02760,AT3G47210,AT4G04640,AT1G08130,AT5G28030,AT4G17950,AT2G44610,AT2G41500,AT5G58530,AT3G50860,AT2G01500,AT4G37780,AT1G75540,AT4G18350,AT5G57440,AT1G69310,AT3G27410,AT1G74970,AT5G11380,AT4G38860,AT3G10970,AT4G32030,AT3G13520,AT3G02100,AT4G12570,AT4G32930,AT3G51850,AT5G62020,AT5G64905,AT5G18120,AT1G30825,AT4G28180,AT1G75400,AT2G43550,AT1G18740,AT5G67430,AT5G40200,AT2G43320,AT1G68560,AT3G24630,AT1G04530,AT3G07470,AT1G04220,AT4G02780,AT4G33430,AT1G43920,AT4G24240,AT4G21340,AT5G35550,AT2G46980,AT3G63220,AT5G17980,AT5G43870,AT5G59070,AT2G28400,AT4G37240,AT2G21200,AT1G26870,AT5G64770,AT1G68830,AT2G42540,AT5G61970,AT5G60790,AT3G12060,AT2G38590,AT5G55700,AT1G05550,AT5G59660,AT2G25090,AT1G47330,AT1G70350,AT2G47170,AT1G46840,AT2G34810,AT5G48200,AT3G01080,AT5G59880,AT3G11110,AT1G27050,AT1G02190,AT2G47430,AT5G55920,AT3G62760,AT1G18700,AT4G27060,AT1G23820,AT5G15410,AT2G01140,AT5G28240,AT5G56780,AT5G02220,AT3G04910,AT1G28170,AT4G38460,AT5G47610,AT4G26200,AT5G15860,AT1G18890,AT2G17290,AT4G36040,AT5G47010,AT4G19710,AT2G16410,AT3G55000,AT5G53150,AT1G22330,AT4G36700,AT2G48010,AT1G20890,AT5G49720,AT1G04830,AT1G74380,AT5G24830,AT1G21510,AT3G17080,AT5G04490,AT3G57050,AT5G13280,AT5G65890,AT3G28920,AT4G05370,AT2G30380,AT2G41470,AT3G15580,AT4G25610,AT5G57960,AT3G25250,AT1G49030,AT3G60280,AT4G03400,AT2G32020,AT4G19420,AT3G61150,AT2G15420,AT3G50750,AT2G22810,AT1G15110,AT2G28190,AT2G28550,AT1G45230,AT5G48970,AT5G49350,AT3G49580,AT1G72750,AT1G11840,AT2G30810,AT2G13360,AT3G11410,AT5G07200,AT3G19070,AT1G31910,AT1G27100,AT3G60510,AT4G32700,AT1G29270,AT3G01060,AT5G01830,AT5G10030,AT5G27150,AT2G30430,AT4G38080,AT2G28320,AT1G68530,AT1G48480,AT4G00900,AT5G19040,AT3G54220,AT3G14680,AT2G19780,AT4G09620,AT5G41890,AT3G53260,AT2G22510,AT5G14080,AT3G02730,AT1G11850,AT3G53550,AT3G05260,AT3G13820,AT2G18900,AT1G69295,AT2G33330,AT3G43660,AT3G27420,AT5G54700,AT1G11320,AT4G08740,AT3G18840,AT3G60760,AT4G36540,AT2G41740,AT1G15270,AT2G44820,AT5G19100,AT4G31500,AT5G01720,AT2G21970,AT4G23760,AT4G35220,AT4G10360,AT2G45430,AT4G16820,AT2G44660,AT4G25730,AT4G39390,AT5G57120,AT2G37640,AT2G37720,AT5G01350,AT3G44990,AT3G12560,AT4G11410,AT4G30470,AT4G21440,AT3G15360,AT2G40280,AT2G23450,AT2G39410,AT3G10020,AT3G63070,AT2G03890,AT1G14620,AT3G18540,AT3G24830,AT5G17260,AT1G16950,AT1G01290,AT1G15660,AT3G17520,AT1G72500,AT1G55325,AT4G37940,AT3G03150,AT2G17870,AT5G25280,AT3G63200,AT1G20510,AT1G56560,AT5G18460,AT2G41530,AT3G56700,AT2G24790,AT3G11920,AT3G21280,AT4G30790,AT1G77600,AT3G51670,AT1G32650,AT2G37140,AT2G41930,AT4G01800,AT2G18970,AT2G01410,AT2G01190,AT4G13830,AT5G10920,AT5G12930,AT3G15090,AT1G05410,AT3G24550,AT4G16730,AT1G23980,AT2G34540,AT1G72175,AT2G03730,AT4G30150,AT1G60810,AT5G54760,AT4G02720,AT4G31550,AT2G40000,AT1G44575,AT5G04810,AT3G13060,AT5G59960,AT2G45730,AT1G15370,AT2G36830,AT1G77750,AT3G55030,AT2G36590,AT2G35060,AT4G26640,AT2G25460,AT1G67480,AT3G27800,AT1G33240,AT1G56660,AT3G02070,AT1G79050,AT1G68790,AT5G42630,AT3G63160,AT2G36960,AT3G14010,AT4G09100,AT2G34060,AT4G12980,AT1G32920,AT1G22370,AT1G05230,AT3G08720,AT3G52880,AT5G64250,AT5G64410,AT2G28950,AT5G07700,AT1G21430,AT4G39040,AT2G14210,AT2G37160,AT5G26010,AT5G60600,AT4G33950,AT2G30990,AT3G11760,AT3G14380,AT2G34710,AT4G02600,AT3G13570,AT5G47520,AT2G46560,AT3G23740,AT3G57120,AT4G38710,AT4G28540,AT5G61290,AT2G45440,AT3G01310,AT1G50650,AT3G60490,AT5G11590,AT3G54010,AT5G25220,AT2G45670,AT1G55610,AT1G07210,AT2G42600,AT3G50070,AT3G25640,AT2G22760,AT3G49950,AT2G28880,AT4G20510,AT5G53400,AT4G34710,AT5G08080,AT3G12120,AT1G33060,AT3G16830,AT3G08850,AT2G40800,AT5G46250,AT2G38170,AT5G17850,AT5G08370,AT5G03270,AT5G57340,AT3G15860,AT5G61850,AT3G57410,AT1G10000,AT4G24660,AT4G36170,AT5G19350,AT3G59940,AT4G01530,AT1G67730,AT5G63900,AT4G29260,AT1G11710,AT5G11990,AT3G53940,AT3G20820,AT4G13530,AT3G61310,AT2G47450,AT2G27490,AT2G23320,AT1G72700,AT1G21480,AT2G47200,AT1G02840,AT5G24890,AT3G13800,AT1G53090,AT3G19515,AT5G17870,AT5G67290,AT5G09740,AT1G67750,AT5G23480,AT3G06035,AT5G64220,AT4G01070,AT5G65700,AT2G34160,AT1G21100,AT5G14420,AT5G53550,AT5G53140,AT3G14180,AT5G24010,AT1G61350,AT2G45960,AT2G44830,AT4G17490,AT3G14690,AT2G45970,AT3G61620,AT5G23090,AT3G54940,AT5G44570,AT4G33910,AT3G58080,AT5G54620,AT4G21560,AT5G20180,AT4G17370,AT2G18300,AT5G16430,AT2G40910,AT4G30970,AT2G46520,AT1G21980,AT1G12830,AT2G31740,AT4G27510,AT2G35720,AT1G78040,AT1G06050,AT1G29630,AT3G13000,AT2G44920,AT3G06870,AT4G34980,AT5G15060,AT5G23000,AT1G07170,AT5G18830,AT3G16140,AT4G25280,AT1G03440,AT1G07280,AT3G44950,AT2G37950,AT1G13280,AT1G78080,AT2G39290,AT3G47570,AT5G20150,AT5G47240,AT2G16690,AT3G03260,AT3G21610,AT2G22680,AT2G24800,AT4G39520,AT3G46630,AT4G26700,AT3G04960,AT2G16940,AT5G62860,AT5G07620,AT5G59140,AT3G13620,AT4G16670,AT1G07160,AT5G60850,AT3G14100,AT5G58450,AT4G34990,AT1G23020,AT4G34260,AT5G13180,AT2G45690,AT5G20840,AT1G27210,AT3G11270,AT1G21460,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AT1G03730,AT4G30000,AT3G06130,AT4G35910,AT5G06570,AT3G04730,AT2G31170,AT2G24880,AT3G15200,AT3G54480,AT4G27720,AT3G55360,AT5G57150,AT3G49350,AT3G16360,AT1G78960,AT3G04240,AT3G10120,AT3G63240,AT3G46780,AT1G23710,AT2G20290,AT2G45210,AT3G16730,AT4G37890,AT1G22360,AT4G01090,AT4G36910,AT1G71030,AT1G24260,AT1G71695,AT5G54850,AT2G23700,AT5G40470,AT5G57480,AT5G48880,AT5G48960,AT1G18440,AT1G07270,AT2G36630,AT4G15920,AT4G24120,AT2G25430,AT5G01810,AT1G77890,AT2G37340,AT1G07700,AT5G23330,AT2G36470,AT1G31550,AT2G29970,AT5G67180,AT5G39785,AT5G65630,AT3G53440,AT3G62160,AT2G43680,AT4G09890,AT4G18975,AT2G41705,AT5G12330,AT3G22160,AT1G65960,AT3G09870,AT1G02220,AT2G45830,AT3G08030,AT5G19140,AT2G43290,AT3G21100,AT3G58650,AT3G52910,AT4G18970,AT3G06140,AT1G68400,AT2G41900,AT1G68840,AT2G22530,AT2G42880,AT2G33570,AT2G41410,AT5G25160,AT3G27260,AT2G21130,AT5G60980,AT4G23860,AT4G12460,AT1G13195,AT4G18570,AT5G06790,AT5G24000,AT1G20330,AT4G23000,AT2G01180,AT4G39210,AT5G46710,AT5G07770,AT1G47530,AT5G21090,AT2G03070,AT4G29940,AT2G41220,AT3G09980,AT3G26990,AT3G44450,AT4G26120,AT3G06150,AT3G26700,AT1G06650,AT4G34520,AT2G41880,AT5G13710,AT3G14000,AT3G13740,AT3G03950,AT1G61660,AT2G17500,AT3G22840,AT2G21340,AT5G14580,AT3G03630,AT4G18820,AT3G12180,AT4G36370,AT4G24010,AT1G54090,AT3G53460,AT2G18730,AT2G46330,AT3G25905,AT3G56370,AT2G36410,AT4G00335,AT5G62940,AT2G28840,AT4G03560,AT5G62030,AT3G22440,AT1G62830,AT1G13080,AT3G60200,AT5G59540,AT1G65295,AT1G12460,AT4G36050,AT5G55740,AT2G43060,AT4G34120,AT1G54510,AT1G24625,AT2G34640,AT5G40170,AT3G60440,AT3G57540,AT4G36900,AT3G15210,AT4G27520,AT4G34680,AT3G24670,AT2G40740,AT5G52660,AT4G15210,AT1G58340,AT1G66840,AT4G00150,AT1G72680,AT4G27840,AT2G17540,AT5G62350,AT5G62720,AT5G67310,AT4G38520,AT1G54180,AT2G25200,AT3G12940,AT1G35510,AT3G06890,AT1G50430,AT1G28580,AT5G17860,AT1G79700,AT1G05470,AT2G22410,AT5G60840,AT2G01760,AT4G04210,AT5G47790,AT5G47820,AT2G16870,AT3G26750,AT3G60530,AT2G28305,AT5G66920,AT3G07010,AT4G05150,AT3G16010,AT1G06840,AT5G57100,AT4G37510,AT2G22450,AT2G24240,AT4G28330,AT2G47860,AT2G19930,AT4G28760,AT4G39100,AT4G18800,AT3G52470,AT5G10870,AT2G46240,AT1G25560,AT5G15580,AT1G72310,AT4G32020,AT4G23250,AT3G53810,AT3G01430,AT5G50860,AT3G04640,AT4G37250,AT4G29610,AT1G76950,AT1G64710,AT5G58070,AT1G01130,AT2G40810,AT3G17310,AT2G22250,AT2G33830,AT1G51460,AT4G16650,AT1G06000,AT1G08510,AT4G30340,AT4G36970,AT5G04720,AT3G50340,AT3G06850,AT2G36380,AT3G19570,AT2G44670,AT3G22400,AT2G40150,AT1G53520,AT2G02070,AT5G58930,AT5G06960,AT5G20540,AT5G08510,AT3G14205,AT4G31590,AT1G78130,AT2G28050,AT3G18070,AT4G37980,AT1G35350,AT5G44680,AT1G69270,AT3G62630,AT2G42290,AT1G01900,AT1G67340,AT5G53900,AT5G22460,AT2G46450,AT2G26040,AT2G13610,AT3G21750,AT4G36360,AT5G61380,AT1G19000,AT1G30490,AT4G10770,AT1G01490,AT5G37020,AT1G62380,AT3G28340,AT5G46760,AT1G55920,AT1G78610,AT4G04960,AT2G26170,AT5G41100,AT1G17145,AT2G42530,AT1G23860,AT2G37940,AT1G19870,AT2G39010,AT1G35780,AT5G46570,AT5G07990,AT5G14640,AT4G37590,AT5G35560,AT1G28440,AT3G55850,AT4G39840,AT3G03770,AT5G57070,AT4G29720,AT2G39550,AT2G21300,AT1G70230,AT4G16442,AT3G15350,AT2G41660,AT2G46600,AT2G44910,AT3G17950,AT3G01370,AT5G64740,AT2G01980,AT4G23740,AT2G39930,AT5G50340,AT3G22120,AT4G16990,AT3G53470,AT3G03870,AT1G64970,AT2G40540,AT3G07360,AT5G12050,AT1G69760,AT2G37080,AT3G60120,AT2G39705,AT3G27010,AT2G17230,AT2G27700,AT3G49140,AT5G47110,AT2G44980,AT5G49170,AT3G01680,AT2G19620,AT4G18030,AT1G29950,AT2G39230,AT5G15230,AT2G32430,AT4G18950,AT1G23080,AT5G08330,AT3G18210,AT5G58560,AT2G26900,AT3G18710,AT2G15580,AT5G64340,AT5G01090,AT1G64640,AT4G21510,AT4G11530,AT3G44380,AT2G27820,AT2G32560,AT1G56720,AT3G53380,AT3G52500,AT2G39170,AT2G41070,AT4G24020,AT5G09460,AT3G09440,AT5G19090,AT3G21190,AT2G04305,AT5G16000,AT1G30330,AT2G25930,AT4G26520,AT1G64900,AT5G43810,AT1G09250,AT5G49440,AT4G36870,AT3G53150,AT5G09870,AT5G47500,AT5G03130,AT5G18310,AT2G38110,AT4G01460,AT4G02410,AT1G78010,AT2G23180,AT2G44740,AT2G37390,AT1G75390,AT2G39710,AT1G63500,AT3G49930,AT2G15050,AT1G78170,AT2G36080,AT3G15890,AT5G03720,AT4G30350,AT3G61630,AT5G48800,AT1G70280,AT5G63040,AT4G35620,AT2G36840,AT3G44820,AT4G22580,AT4G03390,AT2G40480,AT4G28240,AT3G11580,AT4G36220,AT5G48150,AT5G46270,AT5G47220,AT5G22430,AT5G11730,AT5G20630,AT3G15810,AT1G30400,AT3G09780,AT3G46620,AT4G16610,AT5G11160,AT1G74030,AT2G45910,AT3G55710,AT3G07540,AT3G12920,AT3G08620,AT4G02260,AT2G40240,AT3G15530,AT4G01410,AT5G06250,AT1G11310,AT1G54120,AT2G18950,AT5G57790,AT4G13180,AT1G14730,AT1G80420,AT1G07630,AT5G25620,AT2G43010,AT1G67590,AT3G60070,AT1G79630,AT4G20260,AT2G45660,AT4G12970,AT3G24520,AT5G46510,AT1G14350,AT4G25260,AT2G22970,AT1G68060,AT4G28400,AT4G37320,AT1G27370,AT2G20240,AT2G29320,AT1G69420,AT5G65310,AT4G23496,AT2G45590,AT4G35300,AT5G47640,AT2G33810,AT5G53450,AT1G76590,AT5G04940,AT3G02250,AT3G61820,AT3G52710,AT3G49880,AT4G36030,AT5G19340,AT4G37445,AT1G53430,AT1G19340,AT2G40880,AT3G05690,AT5G67390,AT4G00820,AT4G27730,AT5G62760,AT3G14340,AT5G42620,AT1G07420,AT5G57050,AT5G16190,AT4G14770,AT1G31650,AT1G01250,AT3G14240,AT3G06080,AT5G41920,AT2G38610,AT3G61550,AT2G30530,AT1G60060,AT3G16870,AT5G51560,AT3G60400,AT1G12430,AT1G78260,AT1G20850,AT2G34340,AT1G76580,AT5G07580,AT3G54820,AT3G22104,AT3G54810,AT1G49230,AT2G22540,AT1G26270,AT1G49720,AT1G11700,AT3G17640,AT1G14910,AT1G03160,AT4G33980,AT2G21380,AT3G02170,AT1G69440,AT1G75090,AT4G22010,AT1G18360,AT3G51950,AT1G04240,AT2G19580,AT1G63420,AT2G46530,AT2G22840,AT2G45310,AT2G40140,AT5G53370,AT5G24910,AT2G42320,AT5G25170,AT4G26600,AT1G15360,AT1G76360,AT2G15090,AT1G14840,AT4G22250,AT4G24760,AT5G13750,AT2G17300,AT1G62570,AT1G01470,AT4G13100,AT4G13510,AT2G26910,AT5G53830,AT3G53800,AT5G13590,AT5G25610,AT5G58570,AT2G30780,AT2G36220,AT2G14080,AT3G09000,AT5G13460,AT5G16560,AT5G62000,AT2G46870,AT5G13400,AT4G17230,AT4G37380,AT1G10370,AT2G35820,AT4G20860,AT2G36040,AT3G13690,AT2G41870,AT5G44260,AT2G03710,AT4G36410,AT3G16720,AT1G79970,AT2G40840,AT1G11000,AT1G75820,AT1G79160,AT2G41370,AT4G16880,AT2G30480,AT4G30020,AT4G30090,AT4G18980,AT4G39800,AT4G03070,AT3G25180,AT5G61570,AT5G66770,AT4G30960,AT5G02890,AT3G11090,AT1G76180,AT5G67280,AT5G05190,AT5G28640,AT5G61420,AT1G18670,AT2G30140,AT1G74330,AT3G49660,AT5G03140,AT3G02150,AT1G75640,AT2G10940,AT1G48320,AT3G53210,AT1G21740,AT4G27900,AT2G39700,AT2G46340,AT5G66880,AT5G23850,AT5G08640,AT3G04290,AT4G09900,AT1G13930,AT3G61250,AT2G21660,AT4G31820,AT3G06590,AT4G26080,AT4G18020,AT4G33300,AT4G22780,AT4G13000,AT3G10150,AT3G02110,AT5G48540,AT5G59010,AT3G59430,AT1G09500,AT1G79060,AT2G37630,AT1G73805,AT2G18350,AT5G23940,AT3G55370,AT4G17660,AT3G50630,AT3G18930,AT2G31070,AT1G22030,AT1G01600,AT4G23200,AT5G53200,AT4G38620,AT1G72410,AT4G30410,AT5G45800,AT4G19400,AT5G13140,AT5G20700,AT2G32710,AT4G15610,AT1G33560,AT3G49670,AT4G28530,AT4G32340,AT1G71040,AT4G00950,AT4G36780,AT1G70420,AT5G07800,AT1G70100,AT5G27320,AT5G64330,AT3G54340,AT4G17240,AT1G19830,AT3G05030,AT5G07240,AT3G18050,AT4G21940,AT5G41050,AT1G73870,AT3G45610,AT2G23120,AT2G36750,AT4G36150,AT4G15480,AT4G14750,AT5G22740,AT4G21960,AT5G15310,AT1G10060,AT4G17695,AT1G11120,AT1G29395,AT3G13790,AT4G36550,AT2G18670,AT2G28540,AT1G72940,AT4G36920,AT2G30250,AT2G39220,AT3G51920,AT1G49730,AT2G38860,AT4G22730,AT1G01830,AT4G16770,AT1G11600,AT2G01680,AT4G00880,AT4G37080,AT2G40475,AT4G18880,AT3G02310,AT1G19650,AT1G21090,AT1G75710,AT5G56220,AT5G41070,AT3G59060,AT2G44940,AT1G30600,AT1G58430,AT3G28040,AT2G44080,AT1G11210,AT1G20620,AT4G34480,AT1G66980,AT2G46420,AT5G35430,AT3G63010,AT1G55110,AT1G14580,AT5G26790,AT3G50240,AT2G26710,AT2G41180,AT2G04570,AT2G01670,AT5G60450,AT3G13810,AT4G25480,AT3G55760,AT2G22660,AT3G47500,AT4G30130,AT4G29080,AT5G11060,AT5G28020,AT1G02070,AT1G21810,AT2G34200,AT5G37600,AT3G60690,AT4G08150,AT4G32940,AT1G25510,AT3G46970,AT3G45640,AT3G05980,AT5G02580,AT1G07050,AT5G25210,AT1G24530,AT4G39830,AT4G16260,AT1G21270,AT1G20650,AT1G21060,AT2G45050,AT3G44610,AT3G49260,AT3G48090,AT2G31230,AT5G41900,AT3G52180,AT3G05360,AT5G46330,AT5G65040,AT4G24000,AT3G54950,AT2G03530,AT5G10100,AT2G47890,AT4G33040,AT1G80840,AT4G13710,AT3G50650,AT5G10170,AT5G59050,AT3G54320,AT4G32980,AT5G66800,AT3G62270,AT5G45650,AT1G68360,AT2G34650,AT1G74440,AT4G37740,AT1G54820,AT1G69120,AT3G01140,AT1G50590,AT1G51090,AT5G10380,AT5G55620,AT4G39070,AT4G16590,AT5G45850,AT4G28490,AT4G00870,AT4G34950,AT2G16660,AT4G16780,AT4G03820,AT1G11330,AT3G50700,AT5G38120,AT3G61950,AT1G01320,AT4G27250,AT5G49330,AT4G16750,AT3G45260,AT1G21310,AT5G22570,AT4G26090,AT4G28040,AT1G06180,AT4G29190,AT5G46690,AT3G13960,AT2G01150,AT1G70510,AT2G42200,AT1G53230,AT5G37540,AT1G56680,AT5G24530,AT4G28250,AT4G23260,AT5G14230,AT3G51660,AT5G26230,AT4G24140,AT5G17760,AT3G50930,AT2G01520,AT4G15620,AT5G64550,AT4G04490,AT4G23810,AT1G22160,AT3G56400,AT2G14560,AT4G04630,AT1G02850,AT3G60550,AT2G40130,AT1G77200,AT4G25420,AT2G31880,AT5G66940,AT3G62090,AT3G57920,AT4G28780,AT3G15030,AT5G58900,AT5G01880,AT2G19810,AT4G25990,AT1G28570,AT2G43000,AT3G18250,AT3G62610,AT1G48330,AT1G69490,AT4G01130,AT3G50760,AT1G53160,AT3G26290,AT1G23380,AT1G13700,AT3G56710,AT1G07430,AT4G04750,AT2G20570,AT4G14400,AT3G52430,AT4G37800,AT2G42870,AT5G15160,AT2G40750,AT4G10390,AT5G48170,AT5G55250,AT4G19380,AT5G06510,AT2G28610,AT2G40435,AT2G45900,AT4G16270,AT5G52390,AT4G35190 KAUFMANN_WT/AG-MUTANT-STAGE12_DN Down-regulated wt vs ag mutant Stage12 (Table S2 PubmedID:19385720) AT1G29140,AT2G46860,AT4G29340,AT5G47000,AT2G31980,AT3G19390,AT2G16750,AT5G15110,AT3G62710,AT5G53190,AT3G15280,AT4G14815,AT3G17630,AT3G18220,AT3G09530,AT1G25330,AT3G17980,AT2G21650,AT1G72960,AT5G09730,AT1G70540,AT2G46140,AT1G07540,AT1G76370,AT2G34870,AT5G49130,AT4G16620,AT4G27420,AT1G25230,AT2G34790,AT4G14130,AT4G20780,AT5G49680,AT1G62990,AT1G17710,AT2G13570,AT3G57810,AT4G38190,AT3G02810,AT4G18960,AT1G78460,AT2G21140,AT2G33870,AT5G11360,AT4G27330,AT3G27810,AT4G30270,AT2G42830,AT1G73630,AT5G56510,AT3G52460,AT5G49360,AT2G03980,AT5G57670,AT2G24210,AT4G30490,AT2G38530,AT3G48360,AT3G06490,AT1G75750,AT3G57390,AT5G02540,AT5G04770,AT4G35180,AT1G65730,AT3G10340,AT5G65660,AT1G06080,AT3G14560,AT2G20700,AT5G01520,AT5G23020,AT5G55470,AT1G71870,AT5G45340,AT2G28120,AT1G50290,AT3G58780,AT5G51810,AT2G40460,AT1G23070,AT1G75430,AT2G23170,AT1G20440,AT1G02660,AT1G21670,AT1G02900,AT4G10310,AT1G16510,AT3G02550,AT5G20830,AT3G15500,AT4G34250,AT3G59010,AT1G44350,AT4G18550,AT2G01850,AT1G75450,AT2G37210,AT4G37610,AT1G19940,AT2G35760,AT1G04250,AT2G44500,AT1G68500,AT3G11690,AT4G36380,AT5G05600,AT2G30240,AT3G48450,AT2G21220,AT5G20250,AT3G23130,AT2G32150,AT2G45290,AT3G16470,AT1G61740,AT4G10120,AT2G22330,AT2G42280,AT1G13950,AT2G29340,AT5G24880,AT5G65280,AT3G57040,AT2G20320,AT5G11950,AT1G69850,AT4G24040,AT5G47560,AT3G05140,AT3G43270,AT2G18080,AT5G53210,AT4G39480,AT2G41290,AT5G47180,AT2G39890,AT1G70700,AT5G25830,AT5G47330,AT1G64670,AT4G22590,AT1G62660,AT2G46370,AT1G78440,AT2G22800,AT1G75300,AT5G19120,AT2G21180,AT2G33320,AT4G02050,AT4G35060,AT5G60910,AT1G64740,AT2G27690,AT5G65380,AT4G12430,AT2G44230,AT4G34138,AT3G25570,AT3G48350,AT1G08920,AT3G07350,AT3G19680,AT3G11850,AT4G17245,AT1G09575,AT2G39330,AT3G11600,AT5G14760,AT3G60540,AT2G19800,AT5G14740,AT1G33170,AT3G28220,AT1G19300,AT4G14690,AT4G29770,AT1G72450,AT5G50210,AT5G17310,AT4G04830,AT5G39610,AT1G70790,AT3G44720,AT2G46300,AT1G70290,AT1G14720,AT2G21210,AT1G78070,AT5G64870,AT4G00360,AT4G13800,AT3G25585,AT4G28290,AT2G21060,AT3G30775,AT2G27830,AT5G54400,AT1G18410,AT2G24550,AT2G22990,AT3G15850,AT4G18700,AT5G23210,AT1G30040,AT4G17870,AT3G28910,AT4G23600,AT2G39350,AT5G48930,AT1G03870,AT1G77280,AT1G44100,AT3G60520,AT5G47370,AT3G55870,AT3G19970,AT5G50915,AT4G38690,AT2G40620,AT3G60900,AT5G42650,AT4G38470,AT2G31130,AT3G19270,AT1G05710,AT1G69870,AT5G07010,AT1G59640,AT2G48030,AT3G10910,AT3G17120,AT2G34510,AT4G30520,AT5G24270,AT4G27450,AT5G59740,AT3G23030,AT5G26940,AT3G14770,AT1G72430,AT2G23290,AT4G24050,AT5G12890,AT5G51260,AT3G10985,AT3G27770,AT1G73080,AT1G56580,AT5G40890,AT2G47560,AT1G09440,AT1G26930,AT5G14180,AT5G01190,AT5G23750,AT4G37260,AT5G67060,AT1G53580,AT4G11350,AT2G39650,AT5G64080,AT3G01980,AT5G67300,AT1G71710,AT5G18670,AT5G10090,AT5G20110,AT3G46660,AT5G58650,AT1G58360,AT2G26690,AT2G28870,AT3G05640,AT3G10720,AT3G21670,AT3G49790,AT3G10560,AT5G37300,AT4G02670,AT5G56980,AT1G03610,AT1G27040,AT2G40400,AT2G46360,AT2G17370,AT3G15020,AT4G00050,AT3G27210,AT2G31750,AT5G48650,AT1G10070,AT2G30970,AT3G10040,AT2G16500,AT1G33270,AT1G73370,AT1G14280,AT1G10470,AT3G15630,AT3G44735,AT3G27960,AT2G38820,AT1G05680,AT1G07220,AT5G57780,AT2G42790,AT5G64260,AT5G61590,AT4G34590,AT1G12150,AT1G55260,AT5G49480,AT3G30160,AT1G25550,AT1G68480,AT4G13340,AT2G31390,AT3G55730,AT5G59030,AT4G22570,AT4G27880,AT1G24180,AT1G71960,AT4G16690,AT3G61070,AT3G56200,AT3G52800,AT2G43100,AT4G34050,AT1G22400,AT1G01120,AT5G62230,AT5G02180,AT5G15850,AT5G52310,AT1G61890,AT5G28770,AT2G47440,AT2G38920,AT3G61970,AT1G72990,AT2G02080,AT4G22920,AT2G06255,AT1G10550,AT2G21880,AT3G12150,AT4G19200,AT1G69370,AT1G73480,AT2G42300,AT3G13640,AT3G50660,AT1G68570,AT5G17800,AT1G78490,AT4G28890,AT5G46730,AT4G26140,AT2G28350,AT5G16110,AT1G49740,AT5G52120,AT4G14430,AT5G13170,AT3G53350,AT1G15750,AT1G73600,AT5G57800,AT3G17860,AT4G23670,AT3G27470,AT3G28007,AT4G25835,AT4G30860,AT1G70920,AT2G11810,AT3G55620,AT5G44670,AT3G55130,AT2G05380,AT3G62650,AT5G57660,AT5G13220,AT1G19050,AT4G37790,AT5G59730,AT3G01820,AT4G08950,AT4G38530,AT3G55980,AT3G29020,AT2G36320,AT2G46490,AT3G61640,AT1G19180,AT1G75580,AT5G67110,AT5G23250,AT2G47780,AT1G79420,AT5G56040,AT1G15670,AT4G16740,AT2G14750,AT4G01330,AT3G23050,AT4G12390,AT2G41550,AT2G44130,AT2G26580,AT5G57740,AT3G16370,AT4G35720,AT5G61960,AT5G11000,AT3G04080,AT2G47270,AT2G33350,AT1G13110,AT4G34230,AT2G42040,AT3G19130,AT3G15260,AT5G11420,AT5G23720,AT1G05570,AT4G12730,AT4G30210,AT2G23690,AT3G01500,AT4G17460,AT5G36880,AT5G61440,AT2G33150,AT5G46240,AT5G14120,AT2G46260,AT5G39080,AT5G13790,AT3G12710,AT5G03555,AT4G17340,AT4G38810,AT5G51070,AT1G67530,AT4G37580,AT1G75180,AT3G03480,AT1G08315,AT2G29090,AT2G40970,AT1G19330,AT5G13330,AT4G19170,AT1G68580,AT2G43330,AT1G29440,AT3G10525,AT4G24370,AT3G06500,AT1G54210,AT1G12080,AT5G01800,AT5G65300,AT5G40340,AT4G39640,AT1G75460,AT3G25670,AT3G26510,AT1G29500,AT5G03790,AT3G20460,AT4G38840,AT5G54640,AT1G18210,AT3G48690,AT5G13090,AT5G16480,AT5G57785,AT1G72180,AT1G04610,AT3G11340,AT4G38440,AT4G22850,AT3G14310,AT5G03760,AT4G33666,AT4G17670,AT1G15580,AT2G02810,AT3G24170,AT2G23430,AT1G49660,AT1G69570,AT2G41630,AT3G11900,AT1G70140,AT1G22335,AT2G37770,AT3G45140,AT2G33860,AT3G22420,AT1G76890,AT5G09440,AT1G74430,AT3G13784,AT1G18730,AT1G58080,AT2G21170,AT2G16700,AT3G57550,AT4G28025,AT1G52760,AT1G73390,AT3G50560,AT2G31810,AT2G45070,AT4G37640,AT4G38680,AT4G32290,AT1G57680,AT5G53160,AT1G05100,AT1G47870,AT1G73250,AT3G47620,AT2G34150,AT5G61670,AT5G53510,AT3G62660,AT2G45170,AT2G29290,AT2G38120,AT5G63180,AT5G63800,AT5G53120,AT2G43400,AT3G06450,AT2G42800,AT2G45120,AT2G38000,AT4G28300,AT1G76420,AT5G12040,AT3G11780,AT5G25810,AT1G70730,AT5G39250,AT4G16520,AT3G06060,AT2G41330,AT5G67480,AT2G34770,AT5G41860,AT1G51440,AT1G32700,AT2G24260,AT3G60640,AT5G60400,AT4G24150,AT5G17230,AT5G06530,AT1G12310,AT3G07340,AT2G38540,AT2G06050,AT1G75810,AT4G38940,AT4G25470,AT3G63460,AT3G60080,AT3G50270,AT5G45280,AT2G40110,AT4G28270,AT3G30340,AT5G60680,AT3G16180,AT5G62360,AT3G55140,AT1G53165,AT4G32870,AT2G35290,AT1G14890,AT1G22490,AT4G25630,AT3G18290,AT5G57550,AT1G64620,AT5G15320,AT5G43260,AT1G69030,AT3G57870,AT2G44120,AT5G60880,AT5G59580,AT1G10150,AT1G76080,AT5G10980,AT4G00810,AT1G73500,AT2G42380,AT5G47060,AT1G33250,AT1G08190,AT5G56290,AT5G52510,AT1G26160,AT2G17880,AT5G62880,AT1G64780,AT1G10410,AT4G19430,AT5G14550,AT2G21185,AT5G19440,AT5G60710,AT4G27260,AT5G25240,AT4G12420,AT1G42540,AT4G11560,AT3G58620,AT5G19730,AT1G31830,AT1G53760,AT4G14900,AT4G14500,AT4G28770,AT5G62170,AT2G34070,AT2G39730,AT5G06440,AT5G53760,AT4G35510,AT3G06750,AT2G46510,AT2G35950,AT3G53420,AT1G64380,AT1G70370,AT1G70780,AT5G62280,AT3G23080,AT3G16240,AT5G03700,AT5G01410,AT2G41250,AT3G45680,AT5G51040,AT4G03280,AT3G17800,AT1G08500,AT4G14930,AT1G73840,AT5G64030,AT1G11660,AT5G17540,AT1G17420,AT4G34490,AT1G10020,AT3G48520,AT1G67320,AT1G28200,AT5G01600,AT4G35900,AT2G28470,AT3G09820,AT1G22460,AT1G11260,AT4G21750,AT5G57330,AT2G16440,AT1G77850,AT2G45680,AT2G25490,AT5G11640,AT4G24550,AT5G54380,AT5G13100,AT4G30200,AT3G27540,AT5G03380,AT3G19290,AT4G23060,AT3G14370,AT5G17600,AT3G07680,AT2G47730,AT5G13630,AT3G43810,AT5G43150,AT4G03520,AT1G09850,AT2G24280,AT3G19380,AT1G78100,AT1G48260,AT3G06860,AT4G16444,AT4G32460,AT1G25520,AT3G06760,AT1G03300,AT3G29370,AT1G78970,AT2G33210,AT2G25900,AT5G14710,AT1G26790,AT3G01880,AT3G50850,AT4G26270,AT2G33310,AT3G61960,AT1G26590,AT5G47230,AT3G44440,AT2G47260,AT5G16070,AT4G15420,AT2G43820,AT3G08590,AT5G47570,AT4G28703,AT5G35770,AT4G04040,AT2G36030,AT5G26660,AT1G12630,AT3G13380,AT2G30600,AT4G37870,AT3G04090,AT3G26890,AT4G23490,AT3G01360,AT1G32660,AT1G70710,AT5G22620,AT1G77450,AT5G08139,AT2G46220,AT3G43430,AT3G03210,AT3G02140,AT5G12900,AT5G52400,AT3G03840,AT1G72280,AT5G14880,AT5G55910,AT1G01430,AT4G38960,AT1G68520,AT4G14210,AT1G69410,AT5G53290,AT4G16040,AT4G27890,AT3G18830,AT1G74960,AT5G10970,AT1G11390,AT1G05170,AT3G15540,AT5G51460,AT1G71970,AT5G02450,AT1G77490,AT1G07080,AT1G66140,AT3G14220,AT5G04480,AT5G06860,AT2G28510,AT1G15100,AT2G36430,AT2G30360,AT1G07090,AT4G22130,AT5G59780,AT2G19790,AT2G01860,AT3G07320,AT5G11890,AT1G70940,AT4G38970,AT4G33240,AT5G52170,AT4G33440,AT5G15800,AT4G20880,AT2G44840,AT3G15770,AT3G07390,AT3G21270,AT1G49620,AT5G40460,AT5G18070,AT4G24540,AT2G18980,AT2G35860,AT4G25650,AT4G34770,AT1G07150,AT1G76880,AT1G63090,AT4G29735,AT1G63690,AT5G15350,AT5G13740,AT2G45470,AT5G52900,AT5G16210,AT3G16910,AT1G18610,AT5G19410,AT2G36900,AT5G06130,AT3G19540,AT5G02190,AT1G43710,AT2G34480,AT4G39850,AT2G24050,AT1G55510,AT3G57800,AT4G27500,AT3G07020,AT1G68550,AT3G16570,AT1G31040,AT5G45950,AT1G50020,AT4G36890,AT3G52480,AT4G19050,AT5G04830,AT2G29450,AT5G25820,AT1G07890,AT5G23290,AT5G65650,AT3G14960,AT5G53650,AT3G04920,AT3G26680,AT2G21580,AT5G18640,AT4G12910,AT2G39980,AT2G20800,AT2G34555,AT5G07370,AT3G14990,AT2G44570,AT2G30320,AT1G29880,AT3G60030,AT1G72520,AT4G13630,AT5G10010,AT5G03630,AT1G15120,AT2G39130,AT4G35905,AT5G43450,AT2G32480,AT2G41560,AT2G47990,AT5G66200,AT2G41940,AT3G48570,AT4G02930,AT5G06700,AT4G02440,AT3G57280,AT4G26540,AT5G25460,AT2G48040,AT4G31800,AT5G08530,AT4G03110,AT1G11440,AT5G47910,AT2G39660,AT4G13840,AT3G19100,AT1G32550,AT1G06790,AT3G57660,AT2G31360,AT5G25290,AT2G41430,AT2G18010,AT4G39150,AT1G10950,AT4G27270,AT4G21870,AT2G19450,AT1G80500,AT2G26500,AT5G06720,AT5G67360,AT1G48630,AT3G28720,AT4G29700,AT5G62440,AT4G39080,AT4G32720,AT3G56660,AT2G30090,AT3G56490,AT3G17100,AT5G38520,AT5G67190,AT5G48870,AT5G22400,AT1G67560,AT3G54660,AT4G15550,AT1G75200,AT2G44030,AT2G32970,AT5G65120,AT2G40610,AT1G03600,AT4G25490,AT2G42580,AT2G18450,AT5G23730,AT4G34580,AT1G25420,AT1G53830,AT2G21780,AT2G41640,AT3G50530,AT4G25840,AT3G13130,AT1G12580,AT4G36740,AT4G17830,AT3G26744,AT5G39040,AT4G39280,AT5G21105,AT2G32090,AT4G39030,AT1G51160,AT4G34760,AT4G28750,AT2G30490,AT5G14700,AT4G19530,AT4G30800,AT4G15340,AT1G63950,AT3G03990,AT1G52890,AT1G43650,AT3G08640,AT3G21430,AT3G23410,AT4G22830,AT1G78030,AT2G17480,AT5G62400,AT3G02125 BUCKHOUT_FE-DEFICIENCY_DN Down-regulated by Fe deficiency (Table 2 PubmedID:19348669) AT3G25190,AT5G01600,AT1G21140,AT3G26650,AT2G30570,AT1G50060,AT2G05070,AT3G59930,AT2G40300,AT2G32270,AT5G22270,AT3G56090,AT4G32690,AT1G68650,AT2G21650,AT2G36885 BUCKHOUT_FE-DEFICIENCY_STRONGLY_UP Up-regulated strongly by Fe deficiency (Table 3 PubmedID:19348669) AT3G58060,AT4G16370,AT3G56980,AT5G67370,AT1G56160,AT4G19680,AT5G38820,AT3G12820,AT5G04150,AT1G47400,AT5G55620,AT3G53280,AT1G23020,AT1G74770,AT3G58810,AT5G53450,AT5G05250,AT1G34760,AT3G07720,AT3G61930,AT3G12900,AT3G46900,AT4G19690 BUCKHOUT_FE-DEFICIENCY_WEAKLY_UP Up-regulated weakly by Fe deficiency (Table 4-5 PubmedID:19348669) AT3G18290,AT1G09560,AT5G03570,AT5G67330,AT4G26890,AT2G42750,AT1G14190,AT1G01570,AT2G20030,AT2G28160,AT3G47640,AT3G61410,AT3G56360,AT1G48300,AT5G13740,AT5G19700,AT3G06890,AT2G45400,AT5G26820,AT4G29220,AT4G38950,AT2G29995,AT5G47870,AT1G18910,AT4G22890,AT2G15830,AT4G26050 KIDD_F.OXYSPORUM-TREATMENT_DIFF Differentially regulated genes by the F. oxysporum treatment from the microarray. (Table S1 PubmedID:19671879) AT1G41750,AT3G53980,AT4G01450,AT5G02940,AT2G03980,AT4G13410,AT3G03540,AT2G38180,AT5G40610,AT5G59320,AT4G33550,AT3G03270,AT3G62410,AT5G48480,AT1G69370,AT5G23820,AT1G19670,AT1G23850,AT3G16530,AT5G44420,AT5G47220,AT5G61160,AT3G58160,AT5G13170,AT3G12120,AT1G75270,AT1G11580,AT1G06830,AT5G24420,AT4G04840,AT3G04720,AT1G66100,AT1G70700,AT1G25530,AT3G05730,AT4G24340,AT4G24350,AT1G19640,AT5G48430 KIDD_GENOTYPE_DIFF Differentially regulated genes by the genotype from the microarray. (Table S2 PubmedID:19671879) AT3G53310,AT2G29940,AT5G02940,AT5G10430,AT5G18240,AT3G42570,AT1G54050,AT3G47780,AT4G30450,AT1G12320,AT2G44130,AT3G27660,AT3G17510,AT1G54030,AT4G18640,AT4G13290,AT1G69370,AT4G25000,AT1G06760,AT2G40000,AT4G27070,AT4G01800,AT1G19640,AT5G24780,AT1G23390,AT5G11710,AT2G37460,AT3G52550,AT2G37130,AT5G07990,AT1G49750,AT1G11650,AT5G59330,AT3G23550,AT4G01450,AT5G64530,AT1G02450,AT1G12200,AT5G22860,AT1G27950,AT5G22500,AT5G39190,AT5G05730,AT3G18170,AT1G80170,AT2G39980,AT2G38300,AT5G65070,AT1G21010,AT4G00430,AT3G14020,AT3G03580,AT2G14580,AT3G45640,AT4G13410,AT3G53730,AT2G29420,AT5G04150,AT2G22930,AT4G36410,AT2G26400,AT3G01140,AT3G04630,AT4G14650,AT5G13320,AT1G65500,AT5G40230,AT5G52810,AT1G31550,AT2G38110,AT2G03020,AT3G19710,AT4G13180,AT4G02520,AT5G59510,AT5G24420,AT5G54610,AT5G07010,AT1G05560,AT4G04610,AT1G04110,AT4G28230,AT5G20960,AT5G63650,AT2G03340,AT1G11850,AT4G11360,AT3G10870,AT3G29670,AT5G62770,AT3G29290,AT3G48080,AT2G15830,AT1G62290,AT5G50335,AT1G79620,AT5G02260,AT3G48990,AT5G24520,AT1G12240,AT3G19620,AT2G41090,AT2G39310,AT5G13180,AT3G55290,AT2G22330,AT2G17120,AT2G41510,AT1G06830,AT1G11580,AT1G60960,AT2G23170,AT3G20370,AT2G39010,AT1G35260,AT4G37980,AT5G55450,AT5G05160,AT4G28160,AT4G01870,AT3G16430,AT1G04800,AT1G71695,AT3G45140,AT1G76800,AT5G22580,AT5G03160,AT1G54010,AT1G31710,AT5G48740,AT3G59710,AT1G68500,AT2G45660,AT1G21100,AT1G16410,AT3G22231,AT5G10840,AT1G12010,AT2G46140,AT5G63850,AT1G76790,AT5G35480,AT1G04250,AT5G20820,AT4G31850,AT2G20700,AT2G37760,AT5G35670,AT5G06330,AT3G62410,AT1G67865,AT4G12470,AT3G49620,AT3G28220,AT4G12430,AT2G35150,AT3G43270,AT3G51030,AT4G33030,AT5G17700,AT1G17860,AT4G17030,AT1G78490,AT4G13210,AT1G59740,AT5G40610,AT3G10340,AT5G23230,AT4G16260,AT4G18440,AT1G75280,AT3G23090,AT1G06160,AT3G25900,AT2G21650,AT3G61990,AT3G46370,AT2G02130,AT2G39690,AT3G58000,AT5G55720,AT3G14850,AT2G39030,AT2G34810,AT1G71050,AT5G62680,AT5G38000,AT5G66440,AT5G25130,AT2G18260,AT5G57785,AT2G46070,AT3G16450,AT3G22240,AT3G25070,AT3G16460,AT2G33050,AT1G12570,AT3G04290,AT4G14550,AT3G16530,AT5G18430,AT4G11290,AT4G11310,AT4G29700,AT5G52390,AT1G54020,AT2G28780,AT1G32450,AT3G05730,AT1G77690,AT4G08300,AT4G25780,AT3G16670,AT5G23010,AT2G20870,AT1G33811,AT5G03350,AT3G57600,AT3G28290,AT1G05300,AT1G79430,AT1G14850,AT3G09260,AT1G52190,AT5G61160,AT5G58390,AT5G24160,AT1G31680,AT3G47380,AT3G11930,AT5G08030,AT3G16920,AT4G34135,AT2G18660,AT1G14580,AT2G04570,AT2G26020,AT5G37990,AT1G73330,AT4G11190,AT1G19670,AT2G05380,AT1G33340,AT4G17970,AT2G03980,AT3G22890,AT5G06870,AT5G65080,AT1G70700,AT3G44970,AT5G44420,AT2G32400,AT4G37410,AT3G05690,AT5G57340,AT5G23820,AT1G63710,AT1G62510,AT5G15230,AT1G54040,AT4G27300,AT5G23020,AT5G38020,AT5G35490,AT4G01390,AT2G38530,AT3G12500,AT2G13820,AT1G01600,AT2G04032,AT5G10140,AT1G25540,AT5G33370,AT1G66100,AT2G21140,AT2G15080,AT1G31690,AT4G24350,AT4G24340,AT3G30720,AT3G04720,AT1G16400,AT1G21130,AT1G54000,AT2G02930,AT2G44140,AT3G16420,AT3G23560,AT3G28300,AT3G55310,AT4G28220,AT4G31860,AT5G03170,AT5G10830,AT5G25140,AT5G62670,AT1G21110 KIDD_GENOTYPE_F.OXYSPORUM-TREATMENT_DIFF Differentially regulated genes by both the genotype and the F. oxysporum treatment. (Table S3 PubmedID:19671879) AT4G01450,AT5G02940,AT2G03980,AT4G13410,AT5G40610,AT3G62410,AT1G69370,AT5G23820,AT1G19670,AT3G16530,AT5G44420,AT5G61160,AT1G11580,AT1G06830,AT5G24420,AT3G04720,AT1G66100,AT1G70700,AT3G05730,AT4G24340,AT4G24350,AT1G19640 KRAM_NECTARY_ILN_UP Up -regulated genes displaying nectary-enriched expression profiles by ILN (Table S7 PubmedID:19604393) AT4G12530,AT3G25810,AT2G30650,AT1G69180,AT2G39060,AT5G24270,AT2G36190,AT1G77110,AT3G55910,AT2G26580,AT5G44630,AT5G38120,AT3G55890,AT1G23300,AT2G22680,AT1G70270,AT5G60760,AT5G46540,AT1G17960,AT1G69970,AT4G35480,AT4G30560,AT4G34680,AT2G35920,AT1G03770,AT1G23200,AT1G08630,AT1G79700,AT5G44620,AT2G42830,AT1G74020,AT5G38130,AT5G22500,AT1G64405,AT2G36090,AT1G55610,AT4G30520,AT1G68795,AT3G28220,AT1G23010,AT5G47060,AT3G53720,AT1G53885,AT2G47810,AT3G17600,AT1G32540,AT4G22753,AT2G01980,AT3G49930,AT1G55200,AT2G18360,AT4G02075,AT1G36770,AT2G42570,AT1G05300,AT3G22420,AT5G63860,AT1G07050,AT2G22800,AT1G75730,AT5G55010,AT2G39920,AT2G42660,AT3G51400,AT3G45770,AT1G62360,AT3G25805,AT3G48000,AT2G03530,AT4G37790,AT3G24503,AT3G45780,AT5G65110,AT2G28350,AT5G03180,AT1G19640,AT5G53320,AT5G48880,AT1G77850,AT4G14430,AT4G31570,AT2G39080,AT4G35990,AT3G02280,AT5G19730,AT3G21270,AT1G29500,AT2G41140,AT5G26310,AT1G69850,AT1G18720,AT1G32290,AT5G53900,AT1G77660,AT3G07980,AT5G48950,AT3G13845,AT2G14210,AT1G48280,AT3G29770,AT3G06590,AT1G51340,AT3G13640,AT3G05570,AT4G35240,AT3G14570,AT1G71710,AT4G36920,AT2G06390,AT5G48640,AT5G23380,AT2G35820,AT4G38620,AT1G68050,AT4G23920,AT5G44730,AT1G17490,AT2G39380,AT1G22050,AT5G15320,AT5G46115,AT2G45750,AT1G37150,AT1G33270,AT1G18510,AT5G53800,AT1G51640,AT5G58660,AT1G32560,AT2G27820,AT5G26731,AT1G54200,AT3G27340,AT5G35880,AT3G26380,AT3G13540,AT4G13100,AT5G14150,AT4G34138,AT1G23220,AT4G31820,AT3G62790,AT4G00530,AT1G15170,AT1G21770,AT1G74960,AT4G22150,AT2G25720,AT1G58050,AT3G44735,AT1G27870,AT1G22770,AT5G41220,AT3G27320,AT4G03180,AT2G38960,AT5G27210,AT5G50120,AT4G17670,AT4G24130,AT1G64620,AT4G01897,AT2G26740,AT3G50550,AT1G69360,AT5G58620,AT2G36290,AT2G19860,AT3G06310,AT2G18780,AT3G51940,AT3G05200,AT1G66110,AT2G40540,AT5G63905,AT5G54200,AT3G13910,AT5G17980,AT2G36240,AT2G45120,AT1G26620,AT3G61460,AT3G03440,AT3G52290,AT5G11110,AT3G21280,AT1G21160,AT1G28410,AT3G05640,AT1G75370,AT2G41900,AT2G13650,AT3G49810,AT1G10570,AT1G23380,AT5G52830,AT3G30560,AT2G43670,AT3G06600,AT2G28830,AT1G11440,AT1G08000,AT2G07721,AT4G08350,AT2G25180,AT1G55830,AT1G21920,AT1G74820,AT3G27000,AT2G19930,AT5G19660,AT4G10610,AT2G11140,AT3G09600,AT1G36550,AT3G19000,AT2G19850,AT3G54820,AT5G45050,AT1G31910,AT1G70660,AT1G29220,AT1G68650,AT1G13940,AT1G71010,AT5G47800,AT1G75170,AT5G06720,AT3G62150,AT4G24960,AT2G19900,AT5G03130,AT2G03540,AT2G46590,AT4G19850,AT3G06330,AT3G60780,AT2G22850,AT4G25300,AT2G10560,AT4G09640,AT5G24580,AT5G62070,AT5G54850,AT5G03140,AT1G56320,AT4G38960,AT2G21320,AT3G25640,AT5G52870,AT5G52330,AT5G43580,AT4G04590,AT2G44480,AT4G13460,AT3G15200,AT1G08010,AT1G58060,AT2G16100,AT2G26750,AT3G13530,AT3G28530,AT3G54730,AT4G08360,AT4G25310,AT5G04780,AT5G04860,AT5G23410,AT5G41240,AT5G42730 KRAM_NECTARY_ILN_DN Down -regulated genes displaying nectary-enriched expression profiles by ILN (Table S7 PubmedID:19604393) AT5G40360,AT4G27660,AT3G50410,AT5G07070,AT5G42230,AT1G52690,AT4G38810,AT5G67440,AT5G14940,AT2G46870,AT3G17130,AT1G02400,AT4G27260,AT1G20070 KRAM_NECTARY_MLN_UP Up -regulated genes displaying nectary-enriched expression profiles by MLN (Table S7 PubmedID:19604393) AT2G30650,AT4G12530,AT3G25810,AT1G69180,AT2G39060,AT1G23300,AT5G24270,AT1G77110,AT1G17960,AT5G38130,AT2G26580,AT2G36190,AT5G42230,AT2G22680,AT5G38120,AT2G44480,AT1G36770,AT1G23200,AT5G06720,AT2G42830,AT5G44630,AT2G35920,AT2G14210,AT5G40360,AT1G51340,AT2G47810,AT1G03770,AT1G19640,AT4G34680,AT2G22800,AT5G60760,AT1G70270,AT3G60780,AT1G79700,AT3G17600,AT5G19730,AT1G08630,AT1G23010,AT5G26310,AT5G46115,AT2G18360,AT5G44620,AT1G51640,AT4G23920,AT1G74020,AT5G58660,AT5G50120,AT1G69970,AT3G02280,AT1G55200,AT1G32540,AT3G05640,AT2G36090,AT3G28220,AT3G21270,AT2G03530,AT5G46540,AT1G68795,AT5G43580,AT5G52830,AT1G33270,AT5G26731,AT4G25300,AT4G02075,AT4G31820,AT5G44730,AT2G01980,AT3G53720,AT3G51400,AT1G62360,AT4G13100,AT1G18510,AT5G47060,AT4G35480,AT5G53320,AT1G23220,AT4G36920,AT3G09600,AT1G15170,AT3G55910,AT1G64405,AT3G03440,AT3G25640,AT2G39080,AT3G52290,AT1G52690,AT4G31570,AT2G19850,AT5G22500,AT1G69850,AT1G29500,AT3G62150,AT5G24580,AT1G32290,AT5G14150,AT1G54200,AT4G24130,AT5G55010,AT1G77850,AT5G11110,AT2G39380,AT3G49930,AT2G22850,AT4G34138,AT5G48880,AT5G23380,AT3G45780,AT2G26740,AT1G71710,AT2G28350,AT2G45750,AT3G06590,AT5G48950,AT4G38960,AT3G22420,AT1G75170,AT3G05200,AT1G55610,AT3G24503,AT3G55890,AT2G21320,AT3G50410,AT3G13910,AT1G05300,AT4G37790,AT5G65110,AT4G38810,AT1G56320,AT3G06330,AT3G54820,AT2G13650,AT1G23380,AT1G18720,AT3G48000,AT3G44735,AT1G75730,AT2G45120,AT2G27820,AT4G01897,AT4G35990,AT4G04590,AT1G32560,AT1G21920,AT2G36290,AT1G66110,AT5G03130,AT2G40540,AT5G52330,AT2G41140,AT3G07980,AT4G17670,AT3G45770,AT4G38620,AT4G30560,AT1G21770,AT5G67440,AT2G10560,AT5G48640,AT3G61460,AT2G39920,AT3G13640,AT1G68050,AT1G74960,AT2G19930,AT1G75370,AT1G69360,AT5G54200,AT3G25805,AT4G27260,AT4G35240,AT1G77660,AT5G03180,AT1G22050,AT1G70660,AT1G11440,AT3G14570,AT4G09640,AT5G58620,AT2G06390,AT1G53885,AT3G19000,AT4G27660,AT3G29770,AT5G63905,AT3G06600,AT1G68650,AT1G74820,AT1G02400,AT4G24960,AT1G71010,AT1G17490,AT3G21280,AT2G25720,AT4G30520,AT1G64620,AT1G27870,AT5G35880,AT2G38960,AT3G13540,AT5G03140,AT2G41900,AT5G27210,AT4G14430,AT5G54850,AT5G53900,AT4G03180,AT3G50550,AT2G03540,AT5G53800,AT3G49810,AT1G08000,AT2G18780,AT1G28410,AT2G28830,AT1G26620,AT1G29220,AT2G42660,AT5G45050,AT4G22150,AT1G20070,AT3G27000,AT5G41220,AT5G47800,AT5G52870,AT5G62070,AT3G51940,AT2G19860,AT4G08350,AT3G27320,AT1G21160,AT3G06310,AT1G22770,AT5G19660,AT1G58050,AT3G05570,AT1G31910,AT2G36240,AT2G11140,AT2G25180,AT5G17980,AT1G37150,AT4G19850,AT1G55830,AT1G07050,AT2G35820,AT4G10610,AT1G13940,AT1G10570,AT2G07721,AT4G22753,AT3G62790,AT1G36550,AT3G15200,AT3G13845,AT2G43670,AT2G42570,AT3G27340,AT5G15320,AT5G14940,AT2G46590,AT3G30560,AT3G26380,AT5G07070,AT4G00530,AT2G19900,AT4G13460,AT5G63860,AT1G08010,AT1G58060,AT2G16100,AT2G26750,AT3G13530,AT3G28530,AT3G54730,AT4G08360,AT4G25310,AT5G04780,AT5G04860,AT5G23410,AT5G41240,AT5G42730 KRAM_NECTARY_MLN_DN Down -regulated genes displaying nectary-enriched expression profiles by MLN (Table S7 PubmedID:19604393) AT3G17130,AT1G48280,AT2G46870 KRAM_NECTARY_MMN_UP Up -regulated genes displaying nectary-enriched expression profiles by MMN (Table S7 PubmedID:19604393) AT1G74820,AT4G12530,AT3G25810,AT2G30650,AT1G69180,AT2G39060,AT5G24270,AT1G77110,AT1G52690,AT2G26580,AT2G36190,AT1G17960,AT1G23300,AT5G38130,AT5G38120,AT1G36770,AT5G40360,AT2G22680,AT5G44630,AT1G70270,AT1G23200,AT3G05640,AT2G42830,AT5G06720,AT5G42230,AT1G51340,AT2G47810,AT1G03770,AT5G43580,AT4G23920,AT2G14210,AT5G46115,AT4G34680,AT2G35920,AT3G28220,AT1G23010,AT5G60760,AT2G22800,AT2G19850,AT5G19730,AT3G55910,AT2G18360,AT3G54820,AT5G44620,AT3G55890,AT5G14940,AT3G25640,AT3G51400,AT1G55610,AT3G60780,AT4G35480,AT5G26731,AT3G17600,AT4G38810,AT5G53320,AT1G33270,AT5G58660,AT2G44480,AT1G23220,AT1G20070,AT1G64405,AT4G31820,AT1G23380,AT5G47060,AT3G02280,AT4G31570,AT5G44730,AT4G36920,AT2G03530,AT3G03440,AT1G08630,AT1G55200,AT5G55010,AT5G50120,AT2G10560,AT3G17130,AT1G51640,AT1G74020,AT4G24960,AT1G68795,AT4G30560,AT4G19850,AT1G77850,AT3G06600,AT1G32540,AT5G11110,AT2G40540,AT1G62360,AT1G71710,AT1G69970,AT2G06390,AT1G79700,AT5G23380,AT4G13100,AT2G36090,AT3G21270,AT2G43670,AT3G24503,AT1G02400,AT4G27260,AT4G24130,AT5G52830,AT2G21320,AT2G26740,AT2G27820,AT5G22500,AT1G69850,AT1G75730,AT4G25300,AT3G06590,AT5G58620,AT4G34138,AT3G05200,AT5G65110,AT3G45780,AT3G13910,AT1G53885,AT3G48000,AT5G63905,AT4G37790,AT5G48880,AT5G24580,AT3G13640,AT3G22420,AT1G64620,AT1G29500,AT2G19900,AT2G41140,AT2G03540,AT4G38960,AT2G39080,AT2G46870,AT2G01980,AT1G15170,AT5G46540,AT3G52290,AT5G53900,AT3G62150,AT3G07980,AT3G53720,AT5G62070,AT3G06330,AT4G35990,AT3G09600,AT1G75170,AT1G18720,AT4G02075,AT3G13540,AT1G18510,AT4G38620,AT5G48950,AT1G27870,AT1G28410,AT1G69360,AT5G52330,AT1G22050,AT3G44735,AT2G28350,AT5G47800,AT3G15200,AT1G19640,AT1G68050,AT2G39920,AT5G14150,AT5G26310,AT2G36290,AT2G13650,AT1G05300,AT5G03130,AT4G35240,AT1G21770,AT3G25805,AT1G54200,AT1G75370,AT1G11440,AT3G61460,AT2G46590,AT1G21920,AT5G35880,AT4G17670,AT1G70660,AT1G77660,AT4G27660,AT1G29220,AT5G52870,AT1G26620,AT3G45770,AT1G21160,AT1G32290,AT2G11140,AT5G17980,AT4G22150,AT2G25720,AT1G66110,AT1G74960,AT1G22770,AT5G48640,AT2G22850,AT1G17490,AT2G07721,AT2G39380,AT1G36550,AT2G45750,AT2G41900,AT5G67440,AT5G54850,AT2G19860,AT3G06310,AT1G71010,AT4G14430,AT2G28830,AT3G21280,AT2G19930,AT1G08000,AT5G03180,AT4G03180,AT3G05570,AT5G07070,AT1G07050,AT2G25180,AT3G30560,AT2G38960,AT4G01897,AT1G56320,AT3G49810,AT5G53800,AT5G41220,AT5G27210,AT5G54200,AT3G27320,AT3G50410,AT1G32560,AT1G68650,AT3G62790,AT3G50550,AT1G58050,AT4G09640,AT1G13940,AT2G18780,AT4G10610,AT3G27000,AT4G13460,AT3G13845,AT4G08350,AT1G10570,AT2G45120,AT1G55830,AT3G19000,AT3G51940,AT1G31910,AT3G29770,AT2G42570,AT5G45050,AT2G35820,AT2G42660,AT3G49930,AT5G03140,AT5G19660,AT3G14570,AT5G15320,AT1G37150,AT4G22753,AT4G04590,AT2G36240,AT3G26380,AT4G30520,AT3G27340,AT5G63860,AT4G00530,AT1G48280,AT1G08010,AT1G58060,AT2G16100,AT2G26750,AT3G13530,AT3G28530,AT3G54730,AT4G08360,AT4G25310,AT5G04780,AT5G04860,AT5G23410,AT5G41240,AT5G42730 KRAM_NECTARY_MLN/ILN_UP Up -regulated genes displaying differential expression between mature and immature lateral nectaries- MLN/ ILN (Table S9 PubmedID:19604393) AT3G11430,AT5G42230,AT3G53300,AT4G30270,AT1G35190,AT4G30140,AT2G44480,AT1G20070,AT1G30900,AT5G40360,AT5G07680,AT4G27260,AT3G48690,AT4G36110,AT4G35060,AT5G06720,AT4G34131,AT1G20440,AT1G02400,AT1G52690,AT1G07610,AT4G38810,AT3G10320,AT1G78780,AT3G60780,AT2G44460,AT1G19050,AT1G66120,AT2G40120,AT1G79270,AT3G61900,AT5G67440,AT3G57950,AT4G27657,AT2G37040,AT2G39350,AT5G43580,AT5G43150,AT3G11660,AT3G22840,AT3G45010,AT2G21180,AT5G67370,AT1G24600,AT1G65690,AT2G43060,AT1G69870,AT2G25530,AT5G43180,AT3G50410,AT3G10420,AT2G33520,AT4G25300,AT1G70670,AT5G64260,AT3G01470,AT3G25640,AT4G27030,AT1G06430,AT5G62680,AT4G18425,AT5G10030,AT5G38710,AT3G59900,AT1G11170,AT3G10340,AT5G22630,AT1G16720,AT4G12080,AT1G05170,AT1G67330,AT5G51810,AT5G24580,AT4G12410,AT3G47500,AT1G78000,AT4G09760,AT3G53260,AT4G33560,AT4G38960,AT3G48090,AT3G22540,AT3G23170,AT5G47050,AT2G21320,AT1G57590,AT5G11650,AT5G61430,AT2G21185,AT4G37760,AT3G07700,AT5G02580,AT4G04590,AT2G28110,AT1G01340,AT1G15100,AT5G61340,AT3G23920,AT1G73680,AT1G56320,AT3G49780,AT2G22850,AT4G27660,AT1G69860,AT5G59510,AT5G62920,AT3G12580,AT5G65140,AT1G12140,AT5G54660,AT3G05640,AT4G00950,AT3G62150,AT2G29340,AT1G02920,AT2G46830,AT5G52330,AT1G71330,AT1G10650,AT1G18400,AT4G36710,AT2G24570,AT5G52830,AT5G45940,AT5G24160,AT4G12400,AT3G01530,AT3G50070,AT5G14940,AT1G66100,AT3G09600,AT3G24190,AT5G13720,AT1G68440,AT4G31870,AT3G25690,AT3G06330,AT3G30180,AT1G64940,AT1G51340,AT3G47730,AT1G62900,AT2G16720,AT2G14210,AT2G06850,AT1G35170,AT3G10985,AT2G19850,AT5G50120,AT1G08800,AT5G41780,AT1G02340,AT1G20450,AT4G17840,AT5G50100,AT1G06570,AT1G15400,AT5G24860,AT1G77760,AT4G24700,AT1G32170,AT5G52390,AT4G34990,AT4G33700,AT1G75170,AT5G40170,AT5G24120,AT1G76180,AT4G19170,AT5G35970,AT5G45950,AT2G17500,AT5G24990,AT5G51260,AT1G02930,AT1G35180,AT1G63140,AT1G64950,AT1G70680,AT3G13080,AT3G54730,AT4G25310,AT4G34135,AT5G04780,AT5G25020,AT2G12190 KRAM_NECTARY_MLN/ILN_DN Down -regulated genes displaying differential expression between mature and immature lateral nectaries - MLN/ ILN . (Table S9 PubmedID:19604393) AT2G41560,AT1G02190,AT3G09150,AT2G18950,AT3G26740,AT3G55400,AT1G61870,AT3G17820,AT4G02060,AT4G21590,AT2G20585,AT2G33180,AT2G34640,AT3G02500,AT5G40350,AT1G69200,AT3G05880,AT1G59990,AT2G33210,AT2G38810,AT3G13470,AT5G39800,AT5G46160,AT5G65220,AT5G65360,AT1G13270,AT1G65370,AT2G35370,AT3G14240,AT4G38370,AT5G04900,AT5G41080,AT5G52970,AT3G22210,AT5G16060,AT3G54090,AT1G02205,AT2G03090,AT5G06870,AT2G29570,AT3G20670,AT3G49470,AT5G17870,AT1G01300,AT2G28000,AT5G49555,AT3G09470,AT4G30850,AT1G65920,AT1G15500,AT2G28900,AT2G02780,AT3G14310,AT4G37910,AT1G55490,AT2G18400,AT3G27060,AT5G59690,AT3G05910,AT4G14890,AT5G03300,AT5G37580,AT5G40260,AT1G16000,AT3G17160,AT5G54970,AT1G12090,AT1G31550,AT3G16370,AT5G46050,AT2G43030,AT3G28900,AT4G24770,AT4G30330,AT4G34620,AT2G20530,AT3G47650,AT4G26780,AT5G13520,AT5G66170,AT2G34600,AT2G31750,AT3G57520,AT3G62860,AT3G46560,AT2G39470,AT4G35850,AT5G22640,AT2G32180,AT4G11100,AT5G52280,AT1G66150,AT3G04910,AT5G23310,AT5G63860,AT1G09200,AT1G64880,AT2G19750,AT3G44890,AT4G02930,AT4G29060,AT5G22440,AT5G59870,AT2G14890,AT4G09030,AT2G21640,AT3G48500,AT3G19820,AT1G77750,AT2G38140,AT3G18760,AT5G47190,AT5G05600,AT5G45040,AT4G37890,AT5G08380,AT3G55110,AT1G24020,AT4G01410,AT1G35680,AT3G04920,AT5G10390,AT5G10400,AT5G22880,AT1G77060,AT5G63310,AT1G67720,AT1G05190,AT2G21790,AT3G25920,AT3G27360,AT1G21440,AT1G12080,AT5G51950,AT2G29530,AT1G69040,AT1G66350,AT1G07320,AT3G23990,AT3G52150,AT1G48280,AT3G53130,AT5G07010,AT5G25980,AT3G18680,AT5G23210,AT1G14620,AT2G28950,AT4G15910,AT4G17560,AT1G48330,AT5G04470,AT4G01310,AT4G22010,AT5G09650,AT5G45650,AT2G26440,AT5G49360,AT1G55260,AT1G75900,AT3G07390,AT1G80300,AT2G32650,AT3G53140,AT4G28510,AT5G26000,AT5G40080,AT5G59970 KRAM_NECTARY_MLN/MMN_UP Up -regulated genes displaying differential expression between mature and immature lateral nectaries-MLN/MMN. (Table S9 PubmedID:19604393) AT2G16720,AT5G54660,AT2G44460,AT3G57950,AT1G78000,AT4G04590,AT4G24700,AT4G12080,AT5G61430,AT5G02580,AT5G06870,AT2G44480,AT1G69860,AT2G33520,AT5G10030,AT1G73680,AT2G21180,AT4G21590,AT2G21185,AT3G50410,AT1G56320,AT2G22850,AT3G61900,AT1G15400,AT1G70670,AT1G30900,AT1G68440,AT5G67370,AT5G47050,AT2G17500,AT3G01470,AT3G09600,AT2G26440,AT4G12410,AT3G10320,AT5G07680,AT3G10420,AT1G79270,AT5G59510,AT3G47730,AT2G28110,AT5G40260,AT4G25300,AT5G42230,AT5G52830,AT4G27657,AT5G46050,AT5G41080,AT1G78780,AT5G67440,AT3G50070,AT3G62150,AT5G24990,AT5G62680,AT3G47500,AT5G50120,AT4G36110,AT5G45940,AT3G11430,AT4G36710,AT2G14210,AT1G16720,AT3G17160,AT4G17840,AT1G01340,AT5G24160,AT3G60780,AT1G75170,AT5G38710,AT5G24580,AT3G02500,AT3G19820,AT4G00950,AT1G18400,AT1G12090,AT4G12400,AT4G33560,AT2G46830,AT3G13470,AT1G01300,AT1G66120,AT4G30140,AT5G46160,AT3G01530,AT1G64940,AT5G13720,AT5G06720,AT1G06430,AT4G22010,AT3G06330,AT2G40120,AT3G12580,AT4G38960,AT5G61340,AT1G51340,AT3G47650,AT4G35060,AT5G45650,AT2G24570,AT1G71330,AT1G10650,AT2G43060,AT5G50100,AT1G11170,AT2G21640,AT3G48690,AT3G23170,AT3G45010,AT5G22630,AT5G52330,AT1G02190,AT1G65370,AT2G14890,AT5G45040,AT5G40170,AT3G10340,AT5G45950,AT1G65690,AT1G05170,AT4G01410,AT3G14240,AT5G52970,AT4G27660,AT4G17560,AT5G22880,AT5G59690,AT3G25690,AT2G03090,AT1G06570,AT2G34640,AT4G34990,AT1G35170,AT5G43180,AT1G32170,AT1G35180,AT1G64950,AT1G70680,AT3G13080,AT4G25310,AT5G04780,AT5G25020,AT5G59970,AT2G12190 KRAM_NECTARY_MLN/MMN_DN Down -regulated genes displaying differential expression between mature and immature lateral nectaries-MLN/MMN. (Table S9 PubmedID:19604393) AT2G38810,AT3G55400,AT3G22540,AT3G54090,AT3G24190,AT5G49360,AT2G41560,AT3G27060,AT3G28900,AT5G47190,AT3G14310,AT2G29340,AT2G33180,AT2G21320,AT1G35190,AT3G30180,AT1G31550,AT4G30270,AT4G18425,AT5G43150,AT5G59870,AT2G39470,AT3G07700,AT3G04920,AT3G18680,AT1G66150,AT1G55490,AT3G20670,AT3G23990,AT3G25920,AT4G34131,AT5G08380,AT2G33210,AT1G77060,AT3G22210,AT4G37890,AT4G37760,AT5G63860,AT1G05190,AT5G22440,AT5G54970,AT1G20450,AT2G43030,AT1G61870,AT1G62900,AT1G12080,AT1G67330,AT3G09470,AT4G30850,AT2G06850,AT4G38370,AT1G02340,AT5G40350,AT1G69870,AT4G30330,AT1G13270,AT5G04900,AT1G66350,AT1G59990,AT1G12140,AT5G13520,AT3G04910,AT5G10400,AT5G65360,AT3G53130,AT5G11650,AT5G51260,AT1G24600,AT3G09150,AT3G49780,AT2G28000,AT4G33700,AT5G41780,AT3G48500,AT4G11100,AT2G18400,AT2G29570,AT2G38140,AT4G34620,AT1G07320,AT4G24770,AT5G17870,AT5G24120,AT2G25530,AT4G02060,AT4G26780,AT5G22640,AT5G23310,AT3G17820,AT5G37580,AT3G55110,AT4G15910,AT2G19750,AT5G10390,AT1G08800,AT4G27030,AT3G46560,AT2G18950,AT1G09200,AT3G57520,AT3G27360,AT3G52150,AT4G14890,AT4G35850,AT1G35680,AT5G35970,AT5G40360,AT4G29060,AT5G65220,AT5G63310,AT3G48090,AT4G01310,AT4G31870,AT1G64880,AT4G02930,AT1G48330,AT2G20585,AT1G07610,AT3G05910,AT1G16000,AT3G16370,AT1G48280,AT2G20530,AT1G69200,AT3G23920,AT5G65140,AT1G20440,AT3G44890,AT5G07010,AT2G32180,AT5G49555,AT5G39800,AT5G66170,AT2G34600,AT5G51810,AT3G49470,AT5G04470,AT4G27260,AT4G37910,AT2G21790,AT1G14620,AT3G59900,AT2G02780,AT2G35370,AT1G19050,AT1G15100,AT1G65920,AT5G62920,AT2G31750,AT1G77760,AT3G10985,AT3G18760,AT5G43580,AT3G25640,AT5G52280,AT1G76180,AT2G37040,AT5G51950,AT1G15500,AT1G77750,AT5G16060,AT5G03300,AT1G02205,AT1G02400,AT2G28950,AT4G38810,AT5G09650,AT5G24860,AT3G53300,AT2G19850,AT3G62860,AT1G66100,AT1G55260,AT3G05640,AT3G07390,AT2G29530,AT1G69040,AT3G22840,AT1G57590,AT1G24020,AT3G26740,AT3G53260,AT5G23210,AT4G09760,AT2G28900,AT1G02920,AT2G39350,AT5G64260,AT5G52390,AT4G09030,AT4G19170,AT3G05880,AT1G21440,AT3G11660,AT1G67720,AT1G75900,AT5G05600,AT1G20070,AT5G25980,AT1G52690,AT5G14940,AT1G02930,AT1G63140,AT1G80300,AT2G32650,AT3G53140,AT3G54730,AT4G28510,AT4G34135,AT5G26000,AT5G40080 KRAM_NECTARY_MMN/MLN_UP Up -regulated genes displaying differential expression between mature median and mature lateral nectaries-MMN/MLN (Table S10 PubmedID:19604393) AT1G74820,AT1G73220,AT2G02000,AT2G46870,AT3G17130,AT1G13930,AT1G25330,AT4G25420,AT5G14940,AT4G28140,AT5G15230,AT1G76040,AT3G55290,AT5G17330,AT1G20160,AT1G21460,AT2G37170,AT5G64510,AT1G65450,AT1G52690,AT2G19900,AT2G19970,AT4G33110,AT3G52470,AT2G02010,AT2G37180,AT3G55310,AT4G33120 KRAM_MMN/MLN_DN Down -regulated genes displaying differential expression between mature median and mature lateral nectaries-MMN/MLN (Table S10 PubmedID:19604393) AT2G16720 KRAM_ILN/MLN_UP Up -regulated genes displaying differential expression between mature median and mature lateral nectaries-ILN/MLN (Table S10 PubmedID:19604393) AT5G15230,AT4G33110,AT2G19970,AT1G73220,AT3G55290,AT3G52470,AT1G76040,AT1G65450,AT3G55310,AT4G33120 KRAM_NECTARY_ILN/MLN_DN Down -regulated genes displaying differential expression between mature median and mature lateral nectaries-ILN/MLN (Table S10 PubmedID:19604393) AT1G20160,AT1G21460,AT2G46870,AT1G25330,AT2G02000,AT1G13930,AT5G64510,AT5G17330,AT1G74820,AT3G17130,AT4G25420,AT4G28140,AT2G37170,AT2G16720,AT5G14940,AT1G52690,AT2G19900,AT2G02010,AT2G37180 STRASSER_ELF3_16_UP Up-regulated in elf3_16 (Table S2 PubmedID:19187043) AT1G61800,AT5G56080,AT1G80130,AT5G59310,AT4G31940,AT1G73010,AT5G13170,AT5G45070,AT4G23600,AT4G14090,AT1G47400,AT3G22840,AT2G29090,AT1G68880,AT3G61930,AT3G13784,AT1G65480,AT1G43910,AT3G29590,AT1G23140,AT1G22770,AT1G69870,AT2G27420,AT2G33380,AT3G12900,AT3G46900,AT3G26960,AT3G08860,AT4G33040,AT4G12500,AT4G09820,AT4G02330,AT2G40100,AT4G22610,AT2G11810,AT3G58060,AT4G37430,AT1G76960,AT5G62720,AT2G23910,AT1G68600,AT1G51420,AT4G23990,AT3G05170,AT3G16800,AT4G14020,AT3G61920,AT1G18980,AT4G05390,AT2G29440,AT5G66985,AT5G47910,AT3G12820,AT2G16890,AT1G62780,AT1G27030,AT5G52450,AT1G69830,AT2G21130,AT1G28610,AT3G09250,AT3G08040,AT5G42580,AT5G38030,AT4G13235,AT1G26340,AT3G27570,AT3G09810,AT2G36145,AT3G55120,AT2G37040,AT4G23885,AT4G32340,AT3G46630,AT3G59060,AT1G55020,AT5G39860,AT5G20180,AT3G25290,AT3G15300,AT2G15290,AT5G23830 STRASSER_ELF3_16_DN Down-regulated in elf3_16 (Table S2 PubmedID:19187043) AT4G23300,AT4G30600,AT2G01440,AT1G10660,AT1G54860,AT2G05160,AT5G47310,AT1G02840,AT1G01990,AT1G34320,AT3G45260,AT1G50460,AT3G59770,AT1G70060,AT1G03457,AT1G15750,AT1G68110,AT5G11700,AT3G12140,AT5G23240,AT3G16520,AT2G41550,AT2G33440,AT4G08920,AT4G15560,AT1G56280,AT5G27360,AT4G31820,AT5G64940,AT2G14910,AT3G49810,AT1G64230,AT4G14720,AT5G55600,AT1G64860,AT1G75180,AT5G05690,AT1G20650,AT1G78460,AT4G35780,AT1G47270,AT5G45310,AT4G36600,AT1G10740,AT3G43220,AT5G52070,AT1G01520,AT4G23050,AT4G13030,AT5G44520,AT4G37550,AT5G25900,AT4G32710,AT4G37250,AT5G47040,AT1G19680,AT1G79380,AT2G29400,AT1G33240,AT1G22640,AT3G26100,AT3G14595,AT2G43330,AT3G26932,AT3G02170,AT3G60300,AT1G18460,AT4G29190,AT4G17730,AT3G27690,AT4G01026,AT4G25170,AT1G33050,AT5G57780,AT2G41870,AT1G13080,AT5G59130,AT3G23080,AT2G18280,AT3G06080,AT1G72820,AT1G32900,AT1G64720,AT4G15430,AT5G52570,AT5G24800,AT1G01240,AT3G09600,AT3G18980,AT1G69160,AT3G06070,AT1G43590,AT1G54870,AT5G45820,AT5G59780,AT5G59080,AT1G68840,AT3G17520,AT5G47240,AT2G18050,AT5G26270,AT5G10140,AT5G61590,AT5G17300,AT3G02380,AT2G25900,AT3G48360,AT3G54500,AT1G32560,AT1G71030,AT2G05540,AT2G46830,AT1G01060,AT2G35300,AT2G33830,AT4G35770 STRASSER_ELF3_23_UP Up-regulated in elf3_23 (Table S2 PubmedID:19187043) AT3G22840,AT1G18980,AT1G22770,AT5G38030,AT4G22610,AT1G55020,AT1G80130,AT1G27030,AT5G23830,AT1G76960,AT1G65480,AT3G25290,AT2G16890,AT5G13170,AT1G47400,AT2G29090,AT1G43910,AT1G73010,AT4G33040,AT2G23910,AT4G14020,AT3G46900,AT3G26960,AT5G39860,AT4G13235,AT4G23885,AT2G33380,AT5G66985,AT2G11810,AT4G23990,AT4G31940,AT1G61800,AT3G16800,AT3G09810,AT2G36145,AT3G59060,AT5G56080,AT2G37040,AT4G12500,AT5G62720,AT2G29440,AT3G55120,AT4G05390,AT3G61930,AT2G21130,AT5G20180,AT1G28610,AT5G59310,AT4G02330,AT2G27420,AT1G51420,AT2G40100,AT3G27570,AT1G69830,AT3G46630,AT4G37430,AT3G15300,AT5G45070,AT3G12900,AT3G61920,AT3G13784,AT2G15290,AT5G42580,AT3G08860,AT1G68600,AT3G08040,AT1G62780,AT3G09250,AT1G69870,AT4G32340,AT5G52450,AT1G26340,AT5G47910,AT1G23140,AT3G05170,AT3G58060,AT4G23600,AT3G12820,AT4G14090,AT3G06070,AT5G61590,AT1G68880,AT3G29590 STRASSER_ELF3_23_DN Down-regulated in elf3_23 (Table S2 PubmedID:19187043) AT4G09820,AT1G71030,AT5G45820,AT1G22640,AT5G55600,AT3G02170,AT5G52570,AT1G33240,AT3G16520,AT2G41550,AT3G59770,AT4G14720,AT4G31820,AT3G49810,AT3G18980,AT4G32710,AT1G20650,AT1G47270,AT4G30600,AT1G15750,AT2G33440,AT5G57780,AT5G25900,AT3G43220,AT5G11700,AT1G02840,AT4G01026,AT5G47310,AT3G14595,AT1G34320,AT1G56280,AT4G15560,AT4G37250,AT1G64230,AT1G01240,AT1G70060,AT1G69160,AT4G23050,AT4G37550,AT2G01440,AT1G64860,AT1G75180,AT2G05540,AT2G14910,AT1G72820,AT1G01990,AT1G64720,AT3G26932,AT4G08920,AT1G50460,AT5G27360,AT1G13080,AT5G24800,AT3G27690,AT2G29400,AT1G03457,AT3G45260,AT3G12140,AT3G23080,AT3G60300,AT5G05690,AT1G10660,AT5G64940,AT4G35780,AT4G36600,AT3G06080,AT4G29190,AT1G10740,AT1G19680,AT2G43330,AT1G68840,AT4G25170,AT4G23300,AT1G78460,AT1G18460,AT5G47040,AT3G26100,AT1G79380,AT5G47240,AT2G18280,AT1G33050,AT2G25900,AT2G41870,AT5G44520,AT1G54860,AT3G54500,AT4G13030,AT5G59780,AT5G59080,AT2G05160,AT5G59130,AT4G35770,AT1G32900,AT5G17300,AT4G17730,AT4G15430,AT5G23240,AT3G48360,AT1G01520,AT5G52070,AT1G68110,AT5G45310,AT5G26270,AT2G18050,AT2G46830,AT3G17520,AT2G35300,AT3G09600,AT2G33830,AT1G32560,AT5G10140,AT1G54870,AT3G02380,AT1G01060,AT1G43590 STRASSER_ELF1_16_UP Up-regulated in elf1_16 (Table S3 PubmedID:19187043) AT5G57630,AT1G70810,AT1G20160,AT3G60520,AT2G45660,AT3G05170,AT1G23130,AT1G72450,AT3G15840,AT1G65690,AT2G03710,AT5G47240,AT1G73480,AT4G01550,AT1G33970,AT2G40880,AT4G14560,AT2G22300,AT3G51895,AT4G37180,AT1G70820,AT5G37070,AT5G02810,AT1G12320,AT1G03290,AT5G57340,AT5G09990,AT2G38300,AT2G33590,AT3G12320,AT5G02180,AT1G78550,AT4G09890,AT1G01725,AT3G47500,AT1G19310,AT4G30460,AT3G18170,AT5G45820,AT2G30360,AT3G24500,AT5G25220,AT1G03970,AT5G03660,AT2G46690,AT5G47080,AT5G53330,AT3G15810,AT5G64170,AT2G40270,AT3G26290,AT1G67920,AT4G18280,AT1G69610,AT5G39860,AT5G63450 STRASSER_ELF1_16_DN Down-regulated in elf1_16 (Table S3 PubmedID:19187043) AT4G23493,AT4G28080,AT4G00180,AT2G41590,AT4G30610,AT5G59660,AT2G23700,AT1G67830,AT5G08260,AT4G33680,AT4G12540,AT3G20210,AT4G34110,AT5G20060,AT4G03120,AT1G14810,AT4G22050,AT4G03340,AT3G13560,AT3G57560,AT3G12110,AT3G52140,AT1G16900,AT2G40030,AT2G22230,AT3G02820,AT4G02990,AT5G43070,AT3G57830,AT4G16120,AT5G11320,AT5G39220,AT1G24290,AT3G53560,AT5G20980,AT1G14900,AT4G18670,AT2G35790,AT5G11510,AT5G44500,AT1G16350,AT5G08000,AT2G15690,AT3G62060,AT2G29260,AT1G72040,AT5G23300,AT5G07180,AT3G29590,AT2G15000,AT5G08610,AT3G21370,AT1G43590,AT5G26270,AT1G27760 STRASSER_ELF1_23_UP Up-regulated in elf1_23 (Table S3 PubmedID:19187043) AT1G73480,AT3G24500,AT5G57340,AT2G30360,AT2G38300,AT5G45820,AT3G12320,AT3G26290,AT5G39860,AT5G47240,AT1G01725,AT5G02810,AT4G23493,AT2G46690,AT1G20160,AT2G45660,AT1G33970,AT5G09990,AT4G37180,AT1G67920,AT2G40880,AT5G64170,AT3G51895,AT5G63450,AT1G72450,AT1G78550,AT1G70820,AT3G47500,AT3G60520,AT1G23130,AT4G14560,AT1G12320,AT4G18280,AT5G37070,AT1G03970,AT5G02180,AT1G69610,AT1G03290,AT1G70810,AT3G05170,AT2G33590,AT4G01550,AT5G47080,AT2G22300,AT2G40270,AT4G09890,AT4G30460,AT3G18170,AT5G25220,AT5G53330,AT5G57630,AT1G19310,AT3G15840,AT1G65690,AT3G15810,AT5G03660,AT2G03710 STRASSER_ELF1_23_DN Down-regulated in elf1_23 (Table S3 PubmedID:19187043) AT1G72040,AT2G15000,AT4G18670,AT2G29260,AT5G11320,AT5G23300,AT2G15690,AT1G16350,AT5G39220,AT2G35790,AT3G02820,AT5G08610,AT1G24290,AT2G41590,AT4G22050,AT1G14900,AT5G20980,AT2G22230,AT4G03120,AT3G52140,AT5G44500,AT3G20210,AT4G00180,AT5G59660,AT5G07180,AT4G34110,AT4G03340,AT4G12540,AT3G53560,AT1G14810,AT4G02990,AT1G67830,AT5G43070,AT3G57560,AT3G29590,AT4G16120,AT4G33680,AT3G12110,AT2G40030,AT5G20060,AT1G16900,AT4G28080,AT3G57830,AT2G23700,AT5G26270,AT3G21370,AT3G62060,AT5G11510,AT3G13560,AT4G30610,AT5G08000,AT1G43590,AT5G08260,AT1G27760 STRASSER_ELF3X16-TEMPERATURE_UP Up-regulated genotype (elf3) x temperature of 16 interaction (p<0.01, uncorrected) (Table S4 PubmedID:19187043) AT1G61800,AT5G56080,AT5G59310,AT4G31940,AT5G45070,AT4G23600,AT4G14090,AT5G20790,AT1G68880,AT3G61930,AT3G17790,AT3G02040,AT3G29590,AT1G23140,AT1G69870,AT5G20150,AT1G49860,AT3G45140,AT1G49570,AT4G03960,AT4G09820,AT5G01220,AT1G28230,AT1G24575,AT5G14650,AT2G22200,AT3G12820,AT4G33030,AT4G26950,AT1G22150,AT5G09470,AT5G52190,AT2G03710,AT3G48520,AT2G31790,AT5G20935,AT1G65560,AT1G24735,AT1G77400,AT3G60480,AT1G67470,AT1G31350,AT1G68340,AT1G60190,AT2G35480,AT1G55020,AT3G19160,AT3G17910,AT1G16500,AT3G07650,AT2G48080,AT2G07040,AT4G18700,AT4G32230,AT5G52050,AT5G23830,AT1G02060,AT2G23440,AT1G56150 STRASSER_ELF3X16-TEMPERATURE_DN Down-regulated genotype (elf3) x temperature of 16 interaction (p<0.01, uncorrected) (Table S4 PubmedID:19187043) AT4G26320,AT4G14060,AT1G60470,AT1G36940,AT1G74660,AT3G26050,AT3G51660,AT3G59430,AT3G05890,AT5G55720,AT1G78780,AT2G41480,AT2G16980,AT1G80820,AT1G68110,AT4G14130,AT4G14330,AT1G13300,AT1G31950,AT1G29440,AT1G78990,AT1G56300,AT5G06800,AT1G20030,AT5G66170,AT5G42250,AT1G22640,AT3G29760,AT3G02170,AT4G05070,AT1G13260,AT5G60780,AT2G36050,AT1G78600,AT2G01530,AT1G01240,AT3G18980,AT3G06070,AT3G26290,AT3G06390,AT2G32100,AT5G45820,AT5G61590,AT1G23390,AT3G54500,AT1G71030,AT2G05540,AT2G46830 STRASSER_ELF3X23-TEMPERATURE_UP Up-regulated genotype (elf3) x temperature of 23 interaction (p<0.01, uncorrected) (Table S4 PubmedID:19187043) AT3G05890,AT4G14060,AT1G55020,AT1G60470,AT5G23830,AT4G26320,AT4G14130,AT3G51660,AT1G13300,AT4G31940,AT1G61800,AT2G41480,AT1G31950,AT5G56080,AT1G56300,AT2G01530,AT3G61930,AT3G59430,AT1G80820,AT5G59310,AT2G16980,AT5G45070,AT3G26050,AT1G36940,AT5G60780,AT1G74660,AT5G55720,AT4G14330,AT1G78780,AT5G42250,AT1G69870,AT2G32100,AT1G13260,AT1G20030,AT3G26290,AT5G66170,AT1G23140,AT1G29440,AT4G23600,AT3G12820,AT4G14090,AT5G06800,AT3G06390,AT3G06070,AT5G61590,AT1G68880,AT1G78990,AT5G09470,AT5G14650,AT1G28230,AT3G29590,AT2G31790,AT1G78600,AT3G29760,AT4G05070 STRASSER_ELF3X23-TEMPERATURE_DN Down-regulated genotype (elf3) x temperature of 23 interaction (p<0.01, uncorrected) (Table S4 PubmedID:19187043) AT1G23390,AT3G45140,AT4G26950,AT1G24735,AT1G49860,AT4G09820,AT1G71030,AT5G45820,AT1G49570,AT2G36050,AT1G22640,AT5G52190,AT3G17910,AT1G65560,AT3G60480,AT1G77400,AT1G22150,AT3G02170,AT1G24575,AT5G20935,AT5G20790,AT1G68340,AT3G19160,AT5G01220,AT3G17790,AT2G07040,AT2G22200,AT2G03710,AT3G18980,AT4G33030,AT2G35480,AT2G23440,AT2G48080,AT1G31350,AT4G18700,AT1G67470,AT1G01240,AT3G48520,AT3G02040,AT4G03960,AT4G32230,AT2G05540,AT1G16500,AT1G02060,AT5G20150,AT1G60190,AT3G07650,AT1G56150,AT3G54500,AT5G52050,AT1G68110,AT2G46830 PESARESI_S7-1_PSA1-1_P1-3_LEAVES_UP Up-Coregulated Genes in stn7-1, psad1-1, and psae1-3 Leaves (Table 3 PubmedID:19706797) AT3G09580,AT5G54180,AT5G40890,AT5G24420,AT5G20250,AT4G12600,AT3G62950,AT3G17170,AT5G49360,AT1G33340,AT4G04330,AT4G30610,AT2G40400,AT1G56050,AT5G08610,AT1G69200,AT5G17300,AT3G53460,AT3G03630,AT3G54090,AT2G44040,AT5G58310 PESARESI_S7-1_PSA1-1_P1-3_LEAVES__DN Down-Coregulated Genes in stn7-1, psad1-1, and psae1-3 Leaves (Table 3 PubmedID:19706797) AT5G42800,AT4G22870,AT1G56650,AT5G17220,AT1G03495,AT3G16360,AT4G14090,AT5G54060,AT1G80130,AT1G56600,AT4G19430,AT5G52760,AT3G12580,AT4G14365,AT5G11930,AT4G15620,AT2G17040,AT5G52750,AT1G45145,AT1G66390,AT1G73040,AT1G67360,AT4G32940,AT1G17745,AT5G22460,AT4G39210,AT4G33040,AT5G55450,AT5G18130,AT2G39330,AT1G29395,AT2G19810,AT3G15650,AT2G41410 PESARESI_STN7-1MUTANT/COL-0_UP Up-regulated in the stn7-1 mutant compared to Col-0. (Table S3 PubmedID:19706797) AT5G58310,AT2G44040,AT1G13270,AT3G54090,rps16,AT3G03630,AT5G62920,AT3G53460,AT5G17300,AT1G69200,AT3G07430,AT5G08610,ycf1.1,AT3G44750,AT4G26370,AT1G56050,AT5G62720,AT1G59990,AT5G48470,AT2G04530,AT3G07050,AT2G40400,AT4G09730,AT2G01890,AT1G63940,AT2G39670,AT2G37690,AT4G30610,AT4G04330,AT3G23830,AT1G33340,AT1G06950,AT4G33760,AT5G36910,AT5G09510,AT2G34640,AT5G55220,AT3G23940,AT1G48630,AT1G61580,AT4G00600,AT5G66530,AT1G13650,AT2G21210,AT5G49360,AT2G15890,rpl14,AT1G72440,AT4G34290,AT1G10522,AT3G17170,AT3G62950,AT5G40480,AT5G55280,AT1G52930,AT4G12600,AT2G01830,AT3G10690,AT5G20250,AT1G80480,AT1G63660,AT4G34250,AT2G31170,AT2G04030,AT2G18700,AT3G18130,AT3G48500,AT5G22920,AT5G19750,AT3G57150,AT2G28000,AT2G18300,AT5G64050,AT4G25630,AT1G23205,AT3G06530,AT1G74890,AT2G23350,AT5G46580,AT1G20190,AT1G69530,AT3G55400,AT4G20130,AT3G63190,AT2G15000,AT1G55490,AT2G40610,AT5G54100,AT3G58120,AT5G24420,AT3G12270,AT1G56110,AT2G05990,AT4G28450,AT5G40890,AT5G63430,AT3G16780,AT3G21300,AT5G45930,AT3G10050,AT5G54180,AT3G56070,AT1G79560,AT1G79140,AT5G08280,AT1G23390,AT5G05860,AT3G06730,AT3G56090,petG,AT3G03920,AT3G48100,AT3G09580,AT3G14770,AT5G44020,AT5G58250 PESARESI_STN7-1MUTANT/COL-0_DN Down-regulated in the stn7-1 mutant compared to Col-0. (Table S3 PubmedID:19706797) AT1G73010,AT4G24450,AT1G57630,AT2G41410,AT4G05590,AT3G15650,AT5G18310,AT3G13672,AT5G59320,AT4G15210,AT2G19810,AT5G40780,AT4G37290,AT5G66490,AT3G57540,AT2G07718,AT1G29395,AT5G11970,AT5G61900,AT2G39330,AT1G78020,AT1G23140,AT3G09390,AT1G75300,AT1G01725,AT3G56710,AT5G52320,AT1G32640,AT5G13190,AT4G23140,AT5G42050,AT5G18130,AT5G51190,AT3G09830,AT1G19960,AT4G17030,AT2G47880,AT1G21550,AT4G38550,AT2G38790,AT4G27657,AT2G42760,AT2G28400,AT5G26770,AT1G52000,AT1G67865,AT3G52180,AT5G55450,AT4G17230,AT1G21250,AT2G47130,AT4G09890,AT4G33550,AT1G43910,AT1G29050,AT3G52400,AT3G52430,AT4G36990,AT2G18660,AT4G33040,AT3G29590,AT3G17790,AT5G09990,AT5G58570,AT4G02380,AT4G33050,AT3G57450,AT3G50060,AT4G39210,AT1G70270,AT1G07500,AT3G25400,AT1G62540,AT1G59860,AT4G39890,AT3G19970,AT3G60420,AT3G13910,AT4G21990,AT2G22500,AT5G48570,AT3G01290,AT4G36500,AT2G25625,AT3G48640,AT2G43530,AT5G64870,AT2G39650,AT1G25275,AT1G14370,AT5G66210,AT4G12280,AT4G27280,AT5G22460,AT2G46400,AT4G23880,AT1G57590,AT2G39420,AT5G50800,AT5G47910,AT1G02390,AT5G49280,AT5G52640,AT5G04750,AT5G22380,AT4G12720,AT1G27770,AT1G66080,AT3G53980,AT5G35735,AT3G50480,AT2G15960,AT1G17745,AT5G16200,AT5G06510,AT1G72240,AT4G32940,AT4G14020,AT1G67360,AT2G22240,AT1G73040,AT3G08720,AT5G45380,AT1G10340,AT2G33380,AT1G28370,AT4G24380,AT2G20560,AT1G24140,AT4G38560,AT1G66390,AT3G48650,AT5G22250,AT4G00670,AT1G45145,AT1G58420,AT5G65300,AT5G52750,AT5G61600,AT3G51860,AT4G04830,AT1G19020,AT5G27420,AT5G39670,AT2G17040,AT5G37540,AT5G26920,AT1G76650,AT4G23810,AT4G01390,AT1G22160,AT3G24500,AT1G04770,AT5G54490,AT1G34040,AT1G56150,AT4G15620,AT3G09870,AT5G11930,AT2G18050,AT5G24660,AT1G60190,AT1G35210,AT4G14365,AT1G68600,AT5G10695,AT3G50930,AT3G12580,AT1G67920,AT1G13470,AT2G32140,AT5G52760,AT4G19430,AT1G64360,AT3G61190,AT1G56600,AT5G03210,AT1G80130,AT5G54060,AT4G14090,AT3G16360,AT1G03495,AT5G17220,AT1G76960,AT1G56650,AT4G22870,AT5G42800,AT1G68830 PESARESI_PSAD1-1MUTANT/COL-0_UP Up-regulated in the psad1-1 mutant compared to Col-0. (Table S4 PubmedID:19706797) AT3G48360,AT5G17300,AT1G26790,AT5G37260,AT5G18670,AT1G49200,AT4G37540,AT3G09260,AT3G62950,AT5G49360,AT3G57520,AT5G20250,AT2G05540,AT5G39660,AT4G15660,AT3G14770,AT3G15630,AT1G77760,AT1G23870,AT4G15430,AT2G21210,AT3G15450,AT3G53460,AT5G58310,AT1G02640,AT5G42900,AT1G79700,AT5G62920,AT1G01060,AT3G59350,AT5G65010,AT3G13750,AT5G22920,AT4G26150,AT4G15690,AT3G55580,AT2G26980,AT1G54740,AT5G19120,AT3G07650,AT4G15700,AT3G61060,AT5G14120,AT1G23090,AT5G26200,AT5G56870,AT5G40850,AT3G25890,AT4G02380,AT3G02380,AT3G56680,AT2G41560,AT4G15680,AT4G21870,AT3G13790,AT5G40890,AT1G68440,AT3G30775,AT4G17245,AT5G63430,AT4G16690,AT5G21170,AT2G01860,AT3G54920,AT3G27170,AT1G13270,AT1G13640,AT5G14760,AT1G03870,AT1G22530,AT5G56750,AT5G10250,AT2G33830,AT1G35670,AT3G09610,AT5G53160,AT4G38840,AT3G16310,AT5G67480,AT5G54130,AT1G10740,AT3G11450,AT2G39310,AT2G41250,AT1G69570,AT3G19100,AT1G62500,AT4G19390,AT1G19050,AT5G23380,AT1G11260,AT4G04330,AT2G34070,AT2G28630,AT1G29430,AT5G54120,AT2G18700,AT5G44420,AT1G33050,AT5G46840,AT1G55960,AT1G16170,AT4G34760,AT1G26665,AT1G14290,AT1G65930,AT4G25835,AT3G49790,AT5G42760,AT1G23030,AT5G02840,AT1G60140,AT3G09580,AT2G47700,AT2G31380,AT5G28770,AT1G63180,AT2G46830,AT2G39570,AT3G17510,AT4G19410,AT1G37130,AT1G49500,AT3G15950,AT5G54510,AT4G27130,AT1G30820,AT5G20790,AT4G17090,AT2G41310,AT4G22490,AT2G47420,AT4G38960,AT5G66920,AT2G46900,AT1G61740,AT3G58120,AT2G32450,AT5G05860,AT5G02440,AT1G74890,AT5G15850,AT5G14920,AT1G49600,AT1G28010,AT4G31290,AT3G15620,AT3G09600,AT5G57120,AT4G27450,AT5G03240,AT5G57550,AT5G44020,AT5G67190,AT3G14990,AT1G80280,AT1G15180,AT5G62190,AT3G13000,AT1G10020,AT2G25930,AT2G47240,AT4G05070,AT1G19680,AT5G20630,AT4G17730,AT2G01830,AT5G26880,AT3G21870,AT3G17610,AT3G16950,AT1G02280,AT2G28200,AT3G02140,AT1G13740,AT5G05440,AT5G03555,AT1G74740,AT3G48100,AT4G18340,AT4G38470,AT3G49940,AT3G61160,AT3G46880,AT4G19820,AT1G22890,AT2G07180,AT3G07870,AT1G64490,AT1G54010,AT4G34750,AT5G65660,AT3G62930,AT4G05330,AT1G05890,AT1G80480,AT1G11080,AT1G75750,AT2G44040,AT2G30520,AT2G21660,AT2G31810,AT3G12080,AT2G47910,AT1G80830,AT4G25500,AT1G55000,AT3G62150,AT1G63940,AT4G17080,AT4G25730,AT4G00950,AT3G63160,AT5G04190,AT2G02410,AT1G70780,AT2G01320,AT3G29180,AT5G01340,AT2G42580,AT2G39670,AT1G49320,AT2G28450,AT1G04040,AT5G41260,AT2G18300,AT5G49700,AT4G25780,AT4G32570,AT5G64570,AT5G20360,AT2G22450,AT4G30610,AT5G58480,AT2G22400,AT5G04810,AT1G66230,AT1G19600,AT1G12370,AT5G16110,AT5G08620,AT1G18810,AT3G18780,AT4G38860,AT4G35780,AT1G06830,AT3G50560,AT3G05900,AT4G15420,AT2G40400,AT3G52480,AT4G38540,AT1G29510,AT4G33260,AT1G10660,AT3G53260,AT1G28330,AT3G47860,AT4G28190,AT2G37130,AT1G74250,AT5G49450,AT2G35800,AT1G77690,AT5G04880,AT2G29400,AT3G57040,AT5G28640,AT3G03630,AT1G69530,AT1G64530,AT3G19860,AT1G68110,AT1G09500,AT1G04620,AT3G54650,AT5G59750,AT1G16390,AT5G57655,AT4G31820,AT3G03390,AT4G20870,AT4G14103,AT4G32300,AT5G64280,AT4G29950,AT1G22335,AT3G07050,AT3G47420,AT2G39250,AT1G33340,AT4G18810,AT4G00050,AT1G13950,AT1G12580,AT4G12480,AT1G15750,AT3G16450,AT4G27030,AT4G30720,AT5G04530,AT2G41330,AT1G48210,AT4G38160,AT4G34138,AT1G33110,AT1G49760,AT1G21820,AT4G18740,AT3G13460,AT3G59040,AT4G17070,AT3G03380,AT3G02640,AT5G54180,AT5G18600,AT5G12420,AT2G37250,AT5G64620,AT5G67420,AT1G28290,AT3G58670,AT5G19970,AT2G02100,AT5G11150,AT2G29980,AT3G48990,AT2G25680,AT2G30610,AT2G16440,AT2G16640,AT4G23750,AT1G05810,AT2G36885,AT2G26300,AT4G12490,AT2G23130,AT5G04950,AT1G22500,AT1G75190,AT1G21600,AT1G64500,AT4G19380,AT1G47270,AT1G71410,AT3G54090,AT2G30540,AT2G46250,AT5G65110,AT5G01075,AT4G12420,AT5G63810,AT3G63110,AT1G68400,AT3G06080,AT5G41080,AT5G57110,AT5G27350,AT1G70940,AT1G06350,AT1G42550,AT3G14560,AT5G61020,AT2G47390,AT5G61440,AT2G42840,AT4G24520,AT4G11240,AT5G06110,AT2G01850,AT5G23820,AT5G47560,AT2G23350,AT1G07110,AT1G08980,AT3G06020,AT2G39660,AT5G03470,AT2G25730,AT1G49160,AT1G30720,AT5G51550,AT1G78110,AT1G18370,AT5G46860,AT4G30140,AT1G08560,AT5G66520,AT2G34750,AT2G43760,AT5G01920,AT1G56430,AT2G02950,AT4G12600,AT1G66760,AT5G39590,AT1G30110,AT5G16620,AT3G20270,AT5G20520,AT2G06850,AT5G29000,AT1G07570,AT2G03820,AT2G38820,AT3G17440,AT2G22490,AT1G80550,AT4G37530,AT1G25550,AT5G13140,AT3G27960,AT2G25840,AT4G31140,AT1G28130,AT4G35440,AT3G07430,AT1G61900,AT3G02120,AT1G09780,AT3G48720,AT2G20670,AT1G79410,AT3G01770,AT5G53460,AT5G42750,AT2G46280,AT5G02250,AT1G13980,AT2G43820,AT3G02200,AT4G24660,AT5G27290,AT2G01270,AT3G61100,AT3G16430,AT1G72400,AT1G51280,AT2G17300,AT3G54420,AT2G40360,AT1G76160,AT5G19330,AT2G38530,AT1G56050,AT5G54380,AT3G10340,AT1G79440,AT4G26110,AT3G11230,AT2G46260,AT4G32870,AT2G25800,AT5G62720,AT1G73180,AT5G20600,AT3G17770,AT4G26370,AT1G29440,AT4G29030,AT5G24850,AT4G26650,AT2G05160,AT2G30600,AT3G04670,AT1G72820,AT5G57785,AT5G52900,AT1G01620,AT4G31720,AT4G35050,AT5G43060,AT5G55530,AT1G01990,AT2G44130,AT5G24420,AT3G25150,AT4G23820,AT5G23730,AT3G17650,AT2G18390,AT1G77630,AT5G60540,AT3G55560,AT1G64740,AT5G20130,AT2G29760,AT3G26030,AT3G23760,AT1G33250,AT5G13360,AT5G10140,AT1G47210,AT5G38110,AT5G51570,AT2G15680,AT1G55490,AT4G09050,AT1G18250,AT4G36110,AT4G34830,AT3G46610,AT5G23050,AT2G02420,AT4G27350,AT1G35580,AT1G23390,AT2G39140,AT4G36180,AT5G27400,AT5G05140,AT1G11380,AT4G25170,AT2G44790,AT1G73920,AT1G34630,AT4G16155,AT2G45620,AT5G47610,AT1G06720,AT1G09280,AT5G41060,AT3G51910,AT1G03420,AT5G24460,AT1G53090,AT3G07340,AT3G57290,AT5G66530,AT2G19480,AT2G21385,AT2G39400,AT5G49100,AT2G30010,AT3G56480,AT2G44120,AT5G38930,AT5G64420,AT5G62670,AT2G30510,AT2G03730,AT3G56650,AT5G63420,AT2G30160,AT2G04795,AT1G01540,AT5G48830,AT2G43750,AT1G79530,AT5G22340,AT5G05740,AT5G14800,AT2G47930,AT1G13700,AT2G43620,AT2G30930,AT5G09320,AT5G47540,AT1G60590,AT4G12690,AT5G15810,AT5G08610,AT2G23310,AT3G11600,AT1G11870,AT1G10470,AT3G15310,AT5G35740,AT3G60130,AT3G08740,AT4G34770,AT1G48950,AT4G11460,AT1G32170,AT2G23290,AT1G09620,AT1G63260,AT1G15930,AT5G26570,AT3G13510,AT3G28290,AT5G65000,AT5G05100,AT4G31840,AT5G54300,AT5G63470,AT1G22400,AT1G65870,AT1G04510,AT5G04620,AT1G58032,AT4G25700,AT1G62660,AT5G52110,AT2G27775,AT3G02820,AT3G27770,AT2G03710,AT1G47530,AT1G06950,AT2G41620,AT2G45440,AT3G55330,AT3G10770,AT1G69200,AT4G29060,AT1G55850,AT1G30690,AT2G16060,AT5G24490,AT2G37220,AT2G43170,AT4G21100,AT4G30690,AT4G01800,AT1G21710,AT5G57800,AT1G02110,AT5G36710,AT3G25480,AT5G13770,AT1G62480,AT2G36430,AT3G17170,AT1G06900,AT2G40090,AT2G46310,AT4G15780,AT1G11520,AT3G57020,AT5G21160,AT3G03710,AT5G63190,AT1G31970,AT3G01540,AT1G24340,AT5G48250,AT5G64920,AT3G13450,AT5G06530,AT1G74790,AT1G17470,AT1G29500,AT5G22640,AT5G25240,AT2G36930,AT1G12780,AT1G50490,AT4G34265,AT2G02160,AT1G52980,AT2G05990,AT5G23940,AT1G49650,AT4G01860,AT3G02690,AT1G16720,AT4G03110,AT4G15770,AT1G75180,AT5G19960,AT1G74850,AT4G34135,AT4G24930,AT2G32710,AT1G75220,AT4G37560,AT5G05750,AT5G19950,AT1G09570,AT1G27650,AT5G17890,AT1G71730,AT5G23340,AT4G37550,AT5G51820,AT3G62980,AT3G23880,AT1G58100,AT2G02710,AT5G37710,AT1G48630,AT1G63980,AT2G43330,AT3G15850,AT1G71460,AT3G12920,AT2G28930,AT2G16380,AT3G08730,AT2G24060,AT4G30620,AT5G45490,AT3G55400,AT5G64300,AT5G45040,AT2G20040,AT5G42820,AT4G19600,AT1G48300,AT1G27510,AT4G02800,AT5G18200,AT1G57680,AT4G24670,AT5G55220,AT1G15920,AT4G33530,AT5G22390,AT5G17400,AT3G25860,AT5G24690,AT2G35920,AT2G39150,AT1G15140,AT3G47450,AT4G37250,AT3G07660,AT4G30190,AT3G59020,AT2G41680,AT5G13780,AT4G36540,AT3G22290,AT4G38660,AT5G18650,AT3G23700,AT4G30350,AT4G34820,AT1G48650,AT3G16460,AT1G14345,AT4G16390,AT2G47490,AT1G08550,AT1G12080,AT2G16500,AT5G58250,AT5G24570,AT5G03940,AT3G06060,AT2G44730,AT1G23480,AT3G47610,AT2G34640,AT5G60710,AT1G03090,AT1G72770,AT5G55480,AT2G45670,AT5G56100,AT5G16220,AT3G18800,AT2G19650,AT2G40540,AT4G01330,AT1G13160,AT1G25260,AT4G37790,AT1G50040,AT3G03840,AT4G26555,AT3G02450,AT5G16250,AT1G69220,AT1G19450,AT3G18390,AT3G51280,AT2G42570,AT5G08280,AT1G01120,AT1G70200,AT3G44330,AT1G12280,AT2G38310 PESARESI_PSAD1-1MUTANT/COL-0_DN Down-regulated in the psad1-1 mutant compared to Col-0. (Table S4 PubmedID:19706797) AT4G37990,AT5G40670,AT4G28570,AT1G34340,AT3G16990,AT1G52720,AT5G02290,AT5G41460,AT1G68470,AT5G54855,AT3G10520,AT4G29160,AT1G01140,AT1G41830,AT5G25390,AT2G41430,AT5G57630,AT4G23060,AT4G24960,AT3G28270,AT5G40370,AT4G36360,AT5G20830,AT1G05170,AT5G22460,AT1G72500,AT2G46370,AT5G54960,AT5G22300,AT1G52880,AT3G04210,AT1G07440,AT1G62250,AT3G17020,AT1G49750,AT5G17700,AT4G11000,AT1G21590,AT1G64105,AT5G10730,AT5G60890,AT5G35560,AT2G20145,AT4G04840,AT5G64330,AT2G46680,AT3G44400,AT2G40880,AT5G39950,AT3G16150,AT1G74210,AT3G11410,AT2G44060,AT5G48850,AT2G01670,AT3G60640,AT4G39980,AT2G16750,AT2G44490,AT4G02340,AT2G22900,AT1G13280,AT4G05020,AT5G54610,AT3G22231,AT4G37000,AT1G14980,AT3G05640,AT5G44580,AT5G62350,AT5G51850,AT5G59540,AT2G40970,AT5G63800,AT1G25560,AT3G11090,AT2G44210,AT5G11600,AT5G58590,AT3G61880,AT3G18830,AT3G46110,AT2G07718,AT4G08470,AT5G07990,AT3G47590,AT1G75270,AT4G18010,AT1G17490,AT4G03450,AT5G23010,AT5G25440,AT5G50580,AT5G59780,AT2G39030,AT2G27260,AT1G72630,AT3G50740,AT1G69690,AT3G25570,AT1G51660,AT4G09020,AT3G60420,AT2G21260,AT1G54410,AT4G20930,AT4G38550,AT1G49450,AT5G13800,AT1G55760,AT5G61290,AT4G24370,AT3G47550,AT4G29610,AT4G17100,AT3G28930,AT4G09890,AT3G06890,AT5G55050,AT1G66240,AT4G39510,AT4G39800,AT3G14210,AT3G14620,AT1G71030,AT2G20570,AT3G22740,AT4G13800,AT5G27280,AT5G58070,AT5G64510,AT4G02200,AT3G28180,AT1G11050,AT3G45600,AT5G13750,AT5G67300,AT4G25420,AT5G22860,AT4G22590,AT4G14230,AT1G69970,AT1G56670,AT1G67870,AT1G54820,AT3G50950,AT5G44400,AT3G43800,AT3G56880,AT1G54160,AT1G75440,AT1G61800,AT3G55940,AT5G35490,AT4G34980,AT5G56600,AT5G58430,AT1G27930,AT1G24330,AT5G14940,AT5G18760,AT3G02040,AT1G07000,AT5G11950,AT4G01610,AT4G14680,AT4G27300,AT5G12140,AT2G47060,AT2G32030,AT5G50915,AT3G28950,AT1G17430,AT2G35860,AT5G43150,AT3G57630,AT3G11820,AT4G34480,AT1G33260,AT3G21950,AT1G70810,AT4G31450,AT1G34570,AT3G03270,AT5G02620,AT2G04240,AT1G26150,AT1G72240,AT1G74310,AT1G53920,AT4G32980,AT5G56030,AT1G54100,AT4G05590,AT1G10560,AT3G17130,AT5G39730,AT2G16740,AT1G01500,AT5G04720,AT3G03870,AT1G78670,AT3G13672,AT3G19010,AT5G11740,AT1G64660,AT1G02450,AT1G74450,AT2G19810,AT3G05650,AT4G19170,AT4G33490,AT4G26790,AT5G23020,AT1G31170,AT2G32680,AT3G52740,AT5G28300,AT2G46390,AT3G17800,AT3G11010,AT3G54000,AT1G31130,AT4G27657,AT3G50440,AT1G55450,AT5G63330,AT5G33290,AT2G41190,AT4G15530,AT5G45800,AT1G52800,AT2G23430,AT2G41380,AT5G01950,AT1G52890,AT1G20640,AT2G22540,AT2G29320,AT5G46470,AT4G36830,AT5G64770,AT1G26800,AT4G27820,AT3G10980,AT1G76520,AT4G30460,AT3G23090,AT3G57680,AT4G23140,AT1G07350,AT5G46710,AT3G19550,AT3G42570,AT3G56260,AT4G13770,AT4G17030,AT5G19240,AT5G66640,AT2G18210,AT4G23010,AT2G23810,AT4G22710,AT1G54040,AT1G23130,AT2G38750,AT3G14440,AT4G23270,AT2G43100,AT5G13320,AT4G16770,AT2G16600,AT1G72950,AT1G73630,AT3G10300,AT5G18310,AT1G73750,AT1G18150,AT5G06320,AT1G68760,AT2G40270,AT3G21230,AT2G32210,AT2G34930,AT4G30450,AT5G39785,AT1G63720,AT5G62070,AT1G20440,AT1G09070,AT1G31550,AT1G77580,AT5G62570,AT1G66410,AT5G59820,AT5G66420,AT2G02360,AT4G01700,AT5G64530,AT5G16200,AT1G03430,AT5G27930,AT1G52000,AT5G62020,AT3G10940,AT1G55260,AT2G31880,AT2G36870,AT4G10770,AT4G37470,AT2G37710,AT1G13260,AT5G22580,AT4G23670,AT2G35760,AT3G47960,AT1G51140,AT5G28030,AT1G06080,AT1G33560,AT3G50060,AT1G63830,AT1G21440,AT3G52710,AT2G12400,AT5G45750,AT3G09390,AT2G22550,AT1G62800,AT1G02270,AT2G15050,AT5G44810,AT3G04030,AT5G11060,AT4G23610,AT5G03350,AT2G30870,AT5G02560,AT5G17450,AT5G06300,AT4G12280,AT5G24210,AT2G47130,AT4G03960,AT1G24100,AT2G28470,AT3G18440,AT1G67750,AT1G78370,AT5G66070,AT1G13750,AT4G24450,AT3G52070,AT4G26080,AT3G15350,AT4G12030,AT3G28540,AT4G04750,AT1G74440,AT1G31180,AT1G74090,AT3G14050,AT4G39730,AT1G65860,AT2G16720,AT4G12880,AT4G24010,AT1G02390,AT1G24575,AT1G74100,AT4G17615,AT1G09950,AT1G03310,AT4G23990,AT5G03230,AT2G25250,AT4G28250,AT5G39790,AT3G15810,AT4G01895,AT3G13310,AT2G14750,AT5G11790,AT1G78440,AT1G12090,AT1G51700,AT3G25600,AT4G23570,AT3G50480,AT2G39220,AT5G04750,AT2G32990,AT5G49280,AT5G37770,AT5G54940,AT3G09830,AT2G26530,AT5G16570,AT5G59050,AT5G39030,AT1G02300,AT1G32920,AT4G14400,AT1G64390,AT5G46240,AT1G35710,AT5G61810,AT3G23110,AT1G01250,AT1G75040,AT5G65480,AT5G50950,AT5G11670,AT1G69840,AT4G27570,AT5G51190,AT4G35480,AT1G76360,AT3G25290,AT1G10340,AT2G43020,AT1G70270,AT3G28340,AT2G20750,AT5G19140,AT5G66210,AT3G44260,AT3G09540,AT2G42530,AT5G58670,AT2G39050,AT1G09350,AT4G18280,AT4G37980,AT3G46970,AT3G48640,AT4G09760,AT3G15530,AT1G62540,AT1G59860,AT4G16780,AT1G18870,AT4G33920,AT3G15210,AT1G80130,AT5G64660,AT5G05960,AT4G17340,AT2G40140,AT1G73010,AT2G30420,AT1G78600,AT5G05090,AT3G47540,AT1G73500,AT5G39670,AT2G26190,AT2G44940,AT1G76800,AT5G45380,AT1G11210,AT5G26030,AT3G18710,AT1G68585,AT1G50740,AT1G11700,AT5G13190,AT2G41180,AT3G51660,AT3G26450,AT4G35985,AT1G61890,AT5G20230,AT3G26960,AT5G56000,AT3G16720,AT1G28610,AT5G67280,AT1G13990,AT3G20590,AT4G39940,AT3G54810,AT4G30650,AT3G57450,AT3G52370,AT1G74940,AT2G32150,AT5G59670,AT4G12720,AT4G25490,AT1G04770,AT1G18740,AT4G02330,AT5G07690,AT5G01600,AT1G69720,AT5G10930,AT3G22550,AT5G67390,AT1G20620,AT4G02410,AT3G25400,AT2G40460,AT1G24020,AT4G36500,AT1G27730,AT3G55980,AT3G27210,AT1G19570,AT2G46440,AT4G26130,AT4G33050,AT4G22780,AT4G31550,AT2G36220,AT2G05940,AT1G23710,AT3G52400,AT3G06500,AT2G21380,AT3G63210,AT1G63840,AT1G18330,AT2G40750,AT1G66390,AT5G01520,AT4G25480,AT3G17120,AT4G17230,AT2G06530,AT4G01480,AT5G22630,AT1G67970,AT1G75300,AT4G24570,AT3G05690,AT4G38560,AT5G05410,AT4G11280,AT4G30530,AT1G73540,AT4G00670,AT3G49530,AT5G40500,AT2G41090,AT3G46540,AT4G23880,AT3G07390,AT4G27280,AT1G19380,AT4G14090,AT1G19020,AT3G56400,AT3G28130,AT4G14270,AT1G65790,AT5G42650,AT4G36990,AT4G15210,AT1G75280,AT4G32940,AT3G53980,AT5G42250,AT3G30720,AT1G18590,AT1G21270,AT4G33550,AT2G32160,AT4G18440,AT5G06510,AT5G47910,AT1G22070,AT2G01180,AT3G22370,AT5G64180,AT1G01470,AT2G46650,AT2G39330,AT3G61820,AT1G15010,AT5G53120,AT4G27652,AT2G41410,AT3G45640,AT1G62560,AT5G66400,AT3G46620,AT4G13840,AT1G30500,AT2G21650,AT1G76690,AT5G59130,AT5G64550,AT3G05030,AT3G58990,AT2G23120,AT5G59550,AT2G39650,AT5G60840,AT4G29190,AT2G47180,AT5G61600,AT1G72900,AT3G45140,AT4G36010,AT5G10380,AT3G62750,AT3G22840,AT5G66880,AT5G10760,AT3G19710,AT5G58570,AT1G12845,AT3G07090,AT5G42050,AT1G14200,AT2G22430,AT2G19310,AT5G47070,AT5G49630,AT4G23320,AT5G12940,AT2G38010,AT1G28230,AT5G13200,AT1G18360,AT4G23180,AT4G30960,AT1G14370,AT1G54050,AT5G22380,AT3G16860,AT5G54060,AT5G42800,AT4G39260,AT3G57540,AT5G11930,AT1G20160,AT4G39670,AT1G34040,AT5G26920,AT5G52310,AT4G16880,AT5G48880,AT2G24600,AT5G41740,AT4G29780,AT5G47060,AT2G22880,AT3G15570,AT5G15160,AT2G41870,AT5G65300,AT5G60900,AT1G27770,AT5G64870,AT2G43530,AT1G27030,AT3G29320,AT5G52640,AT1G03495,AT4G17500,AT5G63130,AT2G24850,AT5G43850,AT1G21250,AT3G25780,AT2G30020,AT1G16410,AT4G23130,AT4G18880,AT3G09870,AT2G25625,AT1G64370,AT2G33580,AT3G47480,AT1G17745,AT1G67920,AT4G16860,AT5G50160,AT1G45145,AT2G18660,AT4G14365,AT3G03190,AT4G15490,AT2G40840,AT3G08720,AT4G04830,AT4G15620,AT3G50760,AT5G17220,AT2G35290,AT1G73480,AT2G26440,AT5G18130,AT5G45650,AT1G76180,AT5G20150,AT3G55760,AT1G28480,AT1G72930,AT1G74430,AT5G64170,AT1G73040,AT4G17770,AT1G32640,AT3G01960,AT1G77920,AT3G04640,AT5G27420,AT3G10930,AT2G22500,AT5G11610,AT2G41640,AT4G04610,AT5G37540,AT2G38790,AT5G17860,AT5G09990,AT5G55250,AT3G51860,AT2G32140,AT1G66080,AT1G02820,AT1G22770,AT3G51450,AT1G01560,AT5G52320,AT2G27310,AT1G72940,AT5G22250,AT2G39420,AT2G33380,AT2G31230,AT3G62550,AT2G22240,AT4G21760,AT1G35210,AT4G22870,AT2G38470,AT3G15650,AT3G52180,AT4G18930,AT3G44450,AT3G09440,AT1G58420,AT5G45630,AT1G73600,AT4G03060,AT4G17670,AT1G20450,AT4G27654,AT4G19430,AT1G17380,AT2G42760,AT2G23840,AT5G03210,AT4G09910,AT5G48570,AT5G07460,AT3G02840,AT4G23200,AT5G01790,AT2G14560,AT1G72520,AT1G77960,AT1G80840,AT1G57590,AT4G17490,AT1G51090,AT4G33040,AT5G66650,AT1G53885,AT3G26740,AT1G70820,AT5G47230,AT1G21550,AT2G03310,AT2G44840,AT3G45860,AT1G13930,AT5G52750,AT2G06050,AT1G66090,AT5G47220,AT3G50930,AT1G05575,AT1G78680,AT1G19960,AT3G50770,AT3G56710,AT3G48650,AT1G22160,AT3G25760,AT3G61190,AT5G43440,AT5G67180,AT5G24660,AT5G10695,AT4G09900,AT2G22190,AT1G19210,AT2G26150,AT1G69830,AT4G21380,AT1G62710,AT1G61340,AT4G24380,AT1G72920,AT5G12110,AT2G20560,AT3G17790,AT2G18050,AT4G04020,AT5G55450,AT1G19180,AT3G14200,AT1G29395,AT1G24140,AT2G46400,AT1G74930,AT1G28370,AT1G20510,AT5G50800,AT5G53420,AT2G28400,AT1G67360,AT5G04340,AT2G46600,AT3G44990,AT1G33970,AT2G17840,AT1G60190,AT4G34410,AT4G30660,AT5G52760,AT1G13470,AT1G56600,AT2G42540,AT2G28720,AT5G42380,AT1G68600,AT5G35735,AT4G23600,AT1G17420,AT4G39210,AT2G43010,AT4G14020,AT4G01390,AT2G17040,AT2G46790,AT5G54490,AT4G01080,AT2G40435,AT5G02810,AT3G24500,AT5G47240,AT1G56650,AT1G76650,AT1G64360,AT3G12580,AT3G44860,AT3G16360,AT3G01830,AT1G76960,AT3G26290,AT1G62510,AT4G02770 PESARESI_STN7-1PSAD1-1MUTANT/CL-0_UP Up-regulated in the stn7-1 psad1-1 mutant compared to Col-0. (Table S5 PubmedID:19706797) AT3G09260,AT2G05540,AT1G26790,AT5G17300,AT3G48360,AT5G18670,AT4G26150,AT5G49360,AT5G20250,AT4G37540,AT1G09500,AT5G42760,AT3G62950,AT3G14770,AT5G37260,AT1G77760,AT3G57520,AT2G39310,AT4G15660,AT3G15630,AT2G33830,AT4G15690,AT2G21210,AT1G02640,AT3G15450,AT3G53460,AT1G79700,AT1G01060,AT5G57785,AT1G49200,AT4G21870,AT3G17610,AT5G42900,AT1G23870,AT3G13750,AT4G30140,AT5G56870,AT3G59350,AT4G22490,AT3G13790,AT5G58310,AT5G65010,AT4G15700,AT3G16450,AT4G15680,AT4G14690,AT3G15950,AT5G54130,AT5G14760,AT2G30540,AT3G27170,AT5G54120,AT5G62920,AT1G13270,AT1G55960,AT4G15430,AT4G16690,AT5G39660,AT1G63180,AT1G06180,AT1G01520,AT5G10140,AT5G63430,AT3G30775,AT2G28200,AT3G02140,AT2G34070,AT5G14120,AT3G09610,AT5G40890,AT4G19820,AT1G03870,AT3G55580,AT1G30820,AT1G11260,AT5G36910,AT1G22530,AT1G68440,AT1G74890,AT1G26665,AT1G22890,AT1G69530,AT2G01860,AT5G54510,AT2G26980,AT4G17245,AT1G23090,AT5G28640,AT3G25890,AT5G22920,AT5G01870,AT1G13740,AT3G56680,AT1G35670,AT5G19970,AT3G50560,AT1G54010,AT3G02380,AT5G24850,AT4G29030,AT1G65930,AT3G09600,AT4G25780,AT3G16950,AT1G65870,AT5G10250,AT1G64490,AT3G16310,AT3G15620,AT5G03555,AT1G19050,AT4G38960,AT5G26200,AT5G53160,AT1G28130,AT5G49700,AT2G46830,AT1G12370,AT1G75750,AT3G14990,AT4G32870,AT4G27130,AT4G19410,AT3G21870,AT2G41250,AT3G19100,AT4G30610,AT1G14290,AT1G18810,AT1G80830,AT4G31290,AT4G34760,AT1G15100,AT5G21170,AT5G44020,AT5G64110,AT3G09580,AT1G49320,AT1G54740,AT1G61740,AT1G33050,AT5G01340,AT4G12490,AT1G66760,AT4G12470,AT2G42840,AT2G31380,AT1G62500,AT4G28190,AT1G30720,AT1G06830,AT1G13640,AT2G38530,AT3G10910,AT3G62930,AT4G17090,AT1G37130,AT5G02440,AT4G27030,AT1G02280,AT5G26880,AT4G04330,AT5G52250,AT4G02380,AT2G41560,AT5G02840,AT3G21890,AT5G24420,AT4G38540,AT1G80280,AT1G72060,AT3G08730,AT1G28010,AT1G07610,AT1G69570,AT5G15950,AT1G08560,AT1G49600,AT5G05860,AT5G23820,AT4G00050,AT3G11450,AT3G03630,AT3G05800,AT5G03240,AT3G17510,AT3G49790,AT5G38930,AT5G23730,AT5G57120,AT2G47420,AT1G23030,AT3G29180,AT5G60540,AT2G44040,AT3G14060,AT5G15600,AT1G10740,AT3G54920,AT3G13000,AT4G25170,AT5G20790,AT4G12600,AT3G54420,AT2G39250,AT1G16390,AT5G46840,AT4G23750,AT2G31810,AT5G66920,AT4G32570,AT2G25530,AT2G18120,AT5G40850,AT2G47910,AT2G41310,AT4G17730,AT2G37130,AT5G20630,AT5G54300,AT5G11260,AT2G27420,AT1G65500,AT5G35740,AT2G39670,AT3G53260,AT4G33260,AT3G61100,AT3G54990,AT1G62480,AT5G62190,AT5G15850,AT4G19390,AT2G25680,AT2G01830,AT1G78100,AT1G06350,AT1G79410,AT2G36590,AT2G47700,AT1G55000,AT5G08620,AT3G16460,AT2G40400,AT1G51280,AT1G28330,AT5G23940,AT5G49640,AT4G18810,AT4G38470,AT3G63160,AT3G54090,AT5G59330,AT1G50490,AT3G12920,AT3G11600,AT3G07650,AT3G12080,AT1G80480,AT1G15180,AT5G44110,AT4G25700,AT2G04795,AT2G36885,AT1G21600,AT2G47240,AT5G08610,AT1G19610,AT5G47610,AT4G37530,AT5G45040,AT3G05900,AT5G18600,AT3G16430,AT2G32450,AT1G11080,AT2G25210,AT2G25930,AT3G02120,AT3G62150,AT3G18780,AT3G61160,AT2G18700,AT1G05810,AT4G13180,AT3G57020,AT1G16170,AT1G07450,AT5G49480,AT4G27450,AT1G22400,AT3G08770,AT5G28770,AT3G02640,AT1G60140,AT1G64500,AT4G18740,AT5G64570,AT3G23760,AT2G02100,AT2G39570,AT5G43060,AT3G57770,AT2G38870,AT4G30720,AT3G22230,AT3G46880,AT4G25730,AT1G64530,AT1G52930,AT5G20360,AT4G36180,AT2G46940,AT5G04530,AT1G26770,AT2G43620,AT4G25500,AT1G01620,AT1G04620,AT1G49500,AT5G61020,AT4G00950,AT2G28450,AT2G02410,AT1G48210,AT4G30470,AT5G57170,AT1G35580,AT2G22420,AT3G14600,AT5G01075,AT1G56050,AT4G24660,AT1G04040,AT5G57800,AT2G44120,AT1G66230,AT5G49330,AT1G15930,AT1G11530,AT3G51910,AT4G20870,AT5G02610,AT3G15310,AT5G23380,AT2G46310,AT5G12420,AT4G16840,AT3G13460,AT3G25190,AT3G07050,AT2G47490,AT1G53090,AT2G24540,AT5G17280,AT2G02420,AT4G38160,AT3G52480,AT1G63940,AT4G30620,AT2G30600,AT1G70780,AT4G12480,AT5G41060,AT3G28220,AT2G14660,AT5G13360,AT2G21385,AT1G05890,AT5G48485,AT1G10660,AT4G15830,AT2G22400,AT2G15680,AT1G75170,AT1G50460,AT1G17090,AT1G19600,AT2G06850,AT2G21660,AT1G28290,AT5G52570,AT5G59750,AT5G16250,AT1G48650,AT4G19380,AT5G56040,AT3G56650,AT1G64740,AT4G11240,AT2G33850,AT1G49310,AT3G10340,AT3G03390,AT3G02560,AT3G21770,AT2G25840,AT2G18390,AT5G57655,AT3G13510,AT4G31720,AT4G26370,AT4G33560,AT1G31350,AT2G46280,AT1G74790,AT1G19680,AT5G47500,AT2G44790,AT1G07110,AT5G60670,AT3G03920,AT4G24520,AT5G04810,AT1G60590,AT3G05890,AT4G34265,AT3G08740,AT2G25000,AT2G43760,AT5G64620,AT2G43520,AT1G76090,AT3G17680,AT3G11230,AT3G48100,AT4G18590,AT2G17300,AT3G55400,AT4G35780,AT1G25260,AT1G56430,AT3G49940,AT5G38110,AT5G02250,AT1G05340,AT1G62780,AT5G11150,AT2G04790,AT3G44430,AT4G02850,AT5G13780,AT2G01290,AT4G17560,AT4G28290,AT3G15060,AT3G17440,AT5G41260,AT1G10020,AT5G47560,AT4G15550,AT4G18340,AT2G05990,AT5G54180,AT5G51570,AT1G06100,AT2G19650,AT5G11160,AT3G57830,AT5G33370,AT5G20130,AT5G04880,AT1G18250,AT5G15230,AT5G13650,AT2G37250,AT2G42900,AT1G02870,AT5G02270,AT3G15850,AT3G13450,AT1G78510,AT2G36930,AT5G25090,AT2G44920,AT1G12080,AT1G49760,AT5G50200,AT1G31970,AT1G52200,AT2G16640,AT2G18290,AT3G58700,AT3G56290,AT2G05160,AT4G12420,AT1G69526,AT1G73260,AT1G22780,AT5G09320,AT4G15780,AT3G55330,AT1G68620,AT4G26110,AT2G03820,AT4G30690,AT2G28630,AT4G25835,AT5G42750,AT2G01320,AT3G14560,AT1G51270,AT2G31410,AT5G22340,AT5G20520,AT5G27350,AT4G17070,AT3G57320,AT2G30520,AT3G54510,AT1G61900,AT3G47750,AT2G37190,AT2G46250,AT5G27290,AT3G25480,AT1G08250,AT4G35440,AT2G38810,AT2G24060,AT2G30930,AT3G54560,AT1G19510,AT4G14103,AT5G27850,AT4G26555,AT4G15610,AT5G22440,AT4G02800,AT5G64120,AT2G40300,AT2G39660,AT1G68400,AT5G39590,AT1G69200,AT5G49100,AT2G40540,AT3G20270,AT1G18370,AT3G07430,AT1G74740,AT2G45800,AT2G23350,AT2G27775,AT1G33340,AT5G65110,AT1G63980,AT5G46860,AT3G17170,AT4G16155,AT5G04620,AT4G26650,AT1G22590,AT2G45860,AT2G33370,AT2G01270,AT1G09780,AT3G09200,AT5G55140,AT5G08070,AT5G36710,AT3G63110,AT3G54500,AT5G63420,AT1G18400,AT5G14800,AT2G41840,AT3G59040,AT2G41680,AT1G08570,AT1G12520,AT3G23700,AT1G07570,AT5G55180,AT4G39200,AT4G12830,AT2G30010,AT1G77690,AT2G40360,AT5G05440,AT3G23890,AT2G16060,AT5G24460,AT1G67070,AT1G66840,AT5G28060,AT5G67260,AT3G02080,AT4G31820,AT1G79060,AT1G32310,AT1G75220,AT5G66530,AT5G26280,AT4G23820,AT4G31140,AT3G26030,AT1G16720,AT1G49650,AT1G01190,AT3G28900,AT4G38660,AT1G06950,AT2G16500,AT3G07110,AT3G55970,AT5G16620,AT5G62720,AT4G31875,AT2G25060,AT4G31840,AT3G47860,AT2G25730,AT1G02730,AT5G55580,AT3G03710,AT3G58670,AT4G15770,AT3G02200,AT3G02820,AT4G34830,AT3G59980,AT5G37055,AT5G17710,AT3G48990,AT5G05740,AT5G53460,AT5G66230 PESARESI_STN7-1PSAD1-1MUTANT/CL-0_DN Down-regulated in the stn7-1 psad1-1 mutant compared to Col-0. (Table S5 PubmedID:19706797) AT2G33050,AT1G67950,AT1G68760,AT2G15050,AT5G59000,AT5G53830,AT2G20145,AT4G28250,AT1G55120,AT5G57610,AT5G03760,AT3G18830,AT5G25390,AT5G23010,AT3G48080,AT3G15210,AT1G19330,AT3G06420,AFFX-r2-AT-Actin-M,AT2G41380,AT5G11600,AT5G26220,AT4G26070,AT1G03080,AT5G58930,AT1G78440,AT1G19660,AT5G13800,AT4G33940,AT3G10370,AT5G61290,AT3G47550,AT2G20610,AT5G23570,AT4G23140,AT5G10770,AT3G17700,AT1G07350,AT5G02230,AT3G25570,AT5G10730,AT2G38000,AT5G44820,AT4G22756,AT1G03290,AT4G16870,AT5G04740,AT5G55730,AT3G20300,AT4G28400,AT2G39440,AT2G37710,AT3G21190,AT4G16950,AT1G61800,AT5G03630,AT1G74710,AT3G22200,AT1G59930,AT1G34570,AT5G52450,AT5G18310,AT1G06460,AT4G02340,AT4G39800,AT1G53580,AT3G23840,AT2G38750,AT2G45600,AT1G12200,AT2G39220,AT4G34710,AT1G52890,AT3G45600,AT4G23670,AT1G78270,AT5G45750,AT3G13672,AT1G66980,AT3G28540,AT5G41140,AT5G18760,AT2G15040,AT4G33300,AT2G43500,AT5G59780,AT5G47050,AT2G44490,AT4G26080,AT2G17290,AT2G20960,AT4G26530,AT1G11840,AT3G26450,AT1G68470,AT4G18280,AT5G48850,AT2G16740,AT3G61460,AT1G69450,AT5G01950,AT2G19310,AT4G27180,AT1G20650,AT3G46670,AT4G03450,AT5G50580,AT2G39850,AT4G00780,AT1G64710,AT4G36900,AT4G05590,AT4G36830,AT4G04540,AT3G16800,AT3G46110,AT1G24575,AT2G27830,AT3G17020,AT3G14720,AT4G08300,AT1G34340,AT4G14230,AT3G26170,AT4G39510,AT5G54960,AT1G63840,AT1G63750,AT5G04760,AT1G43620,AT5G41460,AT4G23990,AT1G12010,AT4G23920,AT1G54050,AT3G23470,AT1G02450,AT1G72450,AT3G10520,AT4G27440,AT1G01140,AT1G56670,AT5G40500,AT3G19010,AT3G14620,AT1G09070,AT1G53920,AT4G39980,AT5G25280,AT5G45800,AT1G31230,AT5G11740,AT1G78370,AT4G39350,AT2G30420,AT5G56030,AT5G25440,AT5G14450,AT3G25600,AT1G78600,AT3G51000,AT2G19810,AT3G22231,AT1G01500,AT2G30790,AT3G03520,AT2G22080,AT3G17130,AT5G51850,AT5G06320,AT2G29320,AT3G57680,AT3G16520,AT5G02290,AT4G28570,AT1G74210,AT4G31450,AT5G20700,AT2G44080,AT5G07920,AT1G66410,AT2G37460,AT2G30250,AT2G03600,AT2G44060,AT1G67300,AT2G04080,AT1G67810,AT1G66180,AT1G03430,AT1G55260,AT2G31390,AT1G24330,AT2G19860,AT1G69440,AT2G44210,AT5G02620,AT3G06035,AT1G54100,AT1G20440,AT2G39890,AT4G13830,AT4G05020,AT4G17030,AT1G07440,AT5G43850,AT1G23140,AT5G64180,AT1G33560,AT5G14940,AT1G49750,AT1G52000,AT4G30460,AT2G40270,AT4G04955,AT5G35490,AT4G37470,AT2G43100,AT1G13250,AT1G53310,AT1G13280,AT3G57260,AT2G43530,AT3G50950,AT2G16600,AT4G01550,AT1G09350,AT3G09390,AT2G44940,AT1G74100,AT5G39020,AT5G60680,AT3G44400,AT1G56150,AT1G45145,AT2G23810,AT4G21960,AT2G41190,AT4G23570,AT4G23010,AT4G27570,AT5G11950,AT5G54940,AT1G21440,AT2G36460,AT3G59010,AT1G53160,AT4G34980,AT5G35560,AT4G26090,AT5G62070,AT2G15090,AT2G18210,AT4G13770,AT4G19170,AT5G57630,AT4G17615,AT1G75370,AT5G09990,AT5G06300,AT4G01610,AT5G50570,AT1G11960,AT4G23270,AT1G17970,AT1G13990,AT3G26280,AT5G13750,AT1G80130,AT1G18150,AT5G61810,AT4G39730,AT1G65860,AT2G40970,AT1G17430,AT2G47060,AT4G12880,AT4G30650,AT1G64390,AT1G06080,AT3G03870,AT5G07830,AT2G22540,AT1G74090,AT4G32980,AT4G15530,AT1G24020,AT1G24100,AT5G40760,AT4G24010,AT3G56880,AT1G01250,AT3G50740,AT5G64530,AT1G35720,AT5G46710,AT1G50740,AT1G13090,AT3G18440,AT4G27300,AT1G14790,AT4G27900,AT4G17100,AT1G10560,AT3G46620,AT4G38580,AT4G19120,AT5G66070,AT1G67870,AT1G07000,AT5G39790,AT3G50440,AT5G04720,AT5G47370,AT3G23110,AT1G73010,AT1G72630,AT1G55760,AT5G63330,AT3G10940,AT5G63800,AT5G17450,AT3G53720,AT2G28470,AT3G18080,AT5G62350,AT4G34480,AT1G18870,AT3G47960,AT4G08470,AT1G31130,AT3G57630,AT4G09020,AT1G18330,AT4G01700,AT1G23710,AT2G12400,AT5G07690,AT3G05690,AT1G54820,AT1G54040,AT2G22900,AT1G72890,AT4G23610,AT5G67280,AT2G14750,AT3G60420,AT1G19310,AT5G02560,AT3G11010,AT1G69840,AT1G20640,AT4G12030,AT4G37980,AT4G39940,AT3G28530,AT3G23090,AT5G48370,AT2G23120,AT4G12720,AT3G30720,AT1G31180,AT5G44400,AT2G20340,AT5G42800,AT1G78670,AT5G64330,AT4G36040,AT2G31230,AT3G10300,AT3G19370,AT2G35860,AT4G28240,AT1G73750,AT1G19380,AT5G66640,AT1G18740,AT3G22370,AT1G62800,AT1G64660,AT5G60840,AT3G18710,AT4G14680,AT5G13190,AT1G76520,AT4G33490,AT2G05940,AT5G01600,AT3G22550,AT3G46540,AT4G36500,AT2G43020,AT3G59940,AT5G03350,AT3G19970,AT1G62540,AT2G30870,AT3G14210,AT1G70270,AT5G22860,AT2G35760,AT2G31880,AT3G07090,AT1G11210,AT2G22550,AT5G20830,AT3G06500,AT5G27280,AT4G25480,AT1G26150,AT2G16750,AT1G07280,AT4G36990,AT2G30990,AT4G38550,AT5G49280,AT3G25290,AT5G54610,AT2G06530,AT4G35480,AT5G22580,AT1G10340,AT5G61520,AT3G04210,AT5G19140,AT4G39670,AT1G74440,AT1G26800,AT2G32100,AT4G27280,AT4G16770,AT3G15530,AT5G44810,AT1G68585,AT3G52710,AT4G14400,AT5G47060,AT4G12280,AT5G27930,AT3G53980,AT2G32680,AT3G46600,AT2G04240,AT3G17120,AT3G47540,AT3G05650,AT2G22970,AT4G33050,AT1G63720,AT3G19550,AT5G66210,AT1G77580,AT5G13320,AT1G75280,AT3G09830,AT3G28180,AT1G73500,AT3G14050,AT2G47130,AT4G23880,AT4G30530,AT5G46470,AT3G52070,AT3G48640,AT2G21260,AT4G03960,AT4G17340,AT1G59860,AT5G66420,AT3G56080,AT5G24210,AT1G02300,AT4G30110,AT2G40460,AT3G25400,AT5G16570,AT1G66390,AT1G73480,AT5G63130,AT1G75300,AT4G22710,AT4G04750,AT3G50480,AT3G16720,AT2G41090,AT1G67750,AT5G22630,AT1G63830,AT4G38560,AT5G59130,AT2G07718,AT5G42250,AT1G19570,AT3G11410,AT5G28300,AT3G21950,AT4G10770,AT5G56000,AT1G35710,AT3G58990,AT5G39030,AT5G45380,AT5G42050,AT3G42570,AT2G39050,AT2G02360,AT2G22430,AT1G01470,AT3G19710,AT4G23060,AT3G08720,AT3G21230,AT5G23020,AT3G10980,AT4G15620,AT5G15160,AT5G50950,AT2G21380,AT1G02270,AT4G33550,AT1G12090,AT1G76360,AT1G18590,AT2G46650,AT1G67970,AT1G74430,AT4G14270,AT2G20750,AT4G26130,AT1G69490,AT5G03230,AT4G16780,AT5G67390,AT2G42530,AT5G42650,AT1G69720,AT3G02040,AT5G61590,AT3G15350,AT3G52400,AT5G59050,AT3G52430,AT5G10760,AT4G15490,AT4G26790,AT3G03190,AT2G39650,AT5G01520,AT2G40750,AT1G62560,AT5G53120,AT5G58570,AT5G54060,AT5G17860,AT1G14200,AT5G59550,AT1G76800,AT4G02410,AT1G30500,AT2G22240,AT5G22460,AT1G28610,AT3G09540,AT5G05960,AT5G11060,AT5G33290,AT5G11790,AT2G36220,AT4G23810,AT4G00670,AT2G26190,AT3G61820,AT1G31550,AT5G06510,AT3G56400,AT5G17220,AT4G32940,AT2G41410,AT4G21990,AT2G35290,AT4G15210,AT1G51140,AT5G66400,AT5G65480,AT3G09440,AT1G28230,AT1G14370,AT4G36010,AT5G64870,AT3G47480,AT2G24850,AT3G07390,AT2G01180,AT4G23180,AT1G13750,AT4G13840,AT3G09870,AT4G16880,AT1G72920,AT3G62750,AT5G61600,AT3G52370,AT1G03310,AT1G66080,AT3G57540,AT3G26960,AT3G46970,AT1G72900,AT5G55250,AT1G28480,AT5G13200,AT5G22380,AT3G25780,AT4G31550,AT5G66880,AT1G72930,AT2G41180,AT1G68840,AT2G39330,AT1G20620,AT3G14200,AT4G24450,AT3G05030,AT1G72940,AT2G46440,AT4G14090,AT4G18440,AT5G18130,AT2G25250,AT5G47910,AT1G76690,AT5G45630,AT1G75040,AT1G22770,AT2G32990,AT4G30960,AT4G33040,AT3G04640,AT5G39670,AT4G21760,AT3G54810,AT2G33380,AT1G73040,AT4G09760,AT1G35210,AT1G19180,AT4G03060,AT1G20160,AT4G14365,AT3G50060,AT5G46240,AT5G20150,AT2G21650,AT3G13310,AT5G60900,AT5G26920,AT1G12845,AT5G48880,AT4G24380,AT4G23320,AT2G25625,AT3G44990,AT5G52750,AT5G11930,AT5G22250,AT5G49630,AT1G22070,AT1G03495,AT2G32150,AT1G16410,AT3G45640,AT1G18360,AT5G64550,AT5G59670,AT4G22870,AT1G76180,AT4G17770,AT2G22500,AT3G63210,AT1G58420,AT2G42760,AT4G23130,AT1G19960,AT5G58670,AT1G71030,AT5G01790,AT5G11670,AT4G17230,AT4G01480,AT2G18660,AT3G28130,AT4G18880,AT1G74930,AT4G02330,AT1G27770,AT5G52640,AT1G21550,AT2G33580,AT1G34040,AT1G65790,AT5G12940,AT2G38010,AT5G66650,AT2G46600,AT5G11610,AT2G46400,AT5G07460,AT1G64370,AT4G18930,AT4G39260,AT1G20450,AT3G50760,AT2G23840,AT5G37540,AT1G01560,AT2G39420,AT3G51450,AT5G52310,AT4G09910,AT2G41870,AT2G22190,AT2G41640,AT1G21270,AT1G77920,AT1G13930,AT5G52320,AT1G05575,AT5G10380,AT1G60190,AT1G61340,AT2G06050,AT5G50160,AT2G03310,AT3G55760,AT5G02810,AT5G05090,AT1G74940,AT4G29190,AT4G17490,AT1G25560,AT3G50770,AT3G01960,AT4G04830,AT1G51090,AT2G32160,AT3G29320,AT3G24500,AT1G53885,AT5G45650,AT3G45140,AT1G28370,AT3G51860,AT5G04340,AT1G21250,AT2G38790,AT3G62550,AT3G56710,AT1G78680,AT3G50930,AT1G67360,AT2G32140,AT2G40840,AT5G47230,AT3G15570,AT4G17670,AT1G27030,AT2G26440,AT4G09900,AT5G47070,AT5G27420,AT2G20560,AT2G14560,AT5G10695,AT3G15650,AT5G48570,AT5G54490,AT1G66090,AT4G04020,AT4G23200,AT1G13260,AT1G57590,AT5G12110,AT4G04610,AT1G73600,AT1G77960,AT4G19430,AT5G24660,AT1G22160,AT3G17790,AT4G01080,AT1G62710,AT1G24140,AT1G20510,AT5G50800,AT4G21380,AT2G28720,AT2G18050,AT5G67180,AT3G25760,AT5G43440,AT1G69830,AT5G52760,AT1G17745,AT3G52180,AT5G55450,AT3G48650,AT2G43010,AT2G28400,AT1G70820,AT1G04770,AT4G16860,AT1G13470,AT5G53420,AT1G29395,AT3G26740,AT2G17840,AT3G45860,AT5G47220,AT5G35735,AT4G30660,AT1G56600,AT1G56650,AT1G33970,AT2G42540,AT4G14020,AT4G01390,AT1G76650,AT2G17040,AT3G12580,AT2G40435,AT1G68600,AT4G39210,AT1G64360,AT4G23600,AT5G47240,AT1G76960,AT3G44860,AT3G26290,AT3G16360,AT1G62510,AT1G68830,AT4G02770 PESARESI_PSAE1-3MUTANT/WS-2_UP Up-regulated in the psae1-3 mutant compared to WS-2 (Table S6 PubmedID:19706797) AT3G62950,AT1G09500,AT5G36910,AT1G13650,AT2G40400,AT2G14510,AT5G20250,AT5G58310,AT3G03630,AT5G24420,AT2G36130,AT1G14250,AT5G08610,AT5G61350,AT2G36590,AT4G30610,AT5G62360,AT5G17300,AT3G53460,AT1G75960,AT3G13750,AT1G10522,AT5G44050,AT2G43535,AT5G24470,AT1G69200,AT5G49450,AT3G54090,AT4G20140,AT4G22753,AT3G21300,AT2G44040,AT3G09580,AT4G04330,AT1G33340,AT1G69526,AT1G07450,AT3G26320,AT4G25780,AT3G51870,AT2G29760,AT3G61100,AT3G56650,AT2G15890,AT1G01190,AT3G48500,AT2G05160,AT3G49160,AT5G19120,AT5G54180,AT3G07350,AT4G16590,AT5G40890,AT3G17170,AT5G49360,AT3G25480,AT4G15700,AT2G34060,AT4G16690,AT2G04790,AT3G62930,AT1G20810,AT5G55740,AT4G37540,AT5G56870,AT5G45610,AT2G29300,AT4G12600,AT1G62780,rps16,AT5G45680,AT2G37950,AT1G20070,AT3G62460,AT5G66520,AT4G27450,AT1G56050,AT2G22980,AT1G53830,AT3G15630,AT5G46580,AT5G52970,AT2G03020 PESARESI_PSAE1-3MUTANT/WS-2_DN Down-regulated in the psae1-3 mutant compared to WS-2 (Table S6 PubmedID:19706797) AT3G22740,AT1G45145,AT4G32940,AT5G59680,AT3G23090,AT2G01150,AT1G62560,AT1G64660,AT2G46640,AT1G66350,AT5G52750,AT1G27540,AT3G13980,AT5G20380,AT5G06610,AT2G11810,AT1G19570,AT1G62800,AT1G56170,AT4G03210,AT2G22900,AT3G03190,AT2G41410,AT1G07090,AT1G10970,AT3G61990,AT1G06000,AT4G11290,AT2G47180,AT4G03060,AT4G34135,AT1G65860,AT1G11210,AT3G27210,AT5G04950,AT5G33290,AT1G65060,AT4G22490,AT2G19810,AT4G09020,AT1G28670,AT1G75040,AT4G17770,AT4G24010,AT5G52760,AT4G30270,AT4G01480,AT1G21440,AT1G78490,AT4G39210,AT2G34490,AT2G05380,AT1G30510,AT1G62480,AT3G46770,AT3G16470,AT2G31160,AT5G05960,AT5G18130,AT3G06035,AT1G67360,AT3G21560,AT4G14365,AT5G58390,AT4G35770,AT1G02930,AT1G73040,AT1G10070,AT1G77960,AT4G33040,AT2G17710,AT5G07460,AT5G23020,AT1G52410,AT4G34590,AT5G25110,AT1G62710,AT3G59010,AT2G06050,AT4G21650,AT5G22460,AT3G15650,AT1G03420,AT5G51850,AT3G29590,AT1G52400,AT3G21080,AT2G32990,AT5G05270,AT2G17040,AT1G24020,AT1G68470,AT5G08640,AT3G51240,AT1G27030,AT4G15440,AT1G29395,AT2G02930,AT1G75780,AT3G12580,AT5G54060,AT3G57260,AT4G15630,AT1G66390,AT4G38340,AT5G22580,AT1G17745,AT5G19470,AT5G13930,AT1G73330,AT3G08860,AT5G55450,AT5G11930,AT1G56600,AT2G39330,AT3G16360,AT1G80130,AT4G19430,AT5G17220,AT4G14090,AT5G48850,AT1G56650,AT3G49580,AT4G22870,AT4G15620,AT1G03495,AT1G61800,AT5G42800,AT4G28750 PESARESI_STN7-1PSAD1-1MUTANT/WS-2_UP Up-regulated in the stn7-1 psae1-3 mutant compared to WS-2. (Table S7 PubmedID:19706797) AT1G66100,AFFX-r2-AT-U12639,AT1G31580,AT1G76960,AT1G35710,AT2G14610,AT1G24793,AT1G63880,AT2G43570,AT1G58842,AT5G36910,AT1G23960,AT1G56510,AT1G35612,AT2G18660,AT4G10500,AT1G73490,AT1G14870,AT5G03350,AT2G24850,AT1G33960,AT5G24660,AT5G17880,AT1G66090,AT5G64000,AT3G57260,AT1G65190,AT5G36930,AT2G04450,AT5G25260,AT1G35230,AT1G51280,AT1G24996,AT3G51860,AT4G00700,AT1G19250,AT5G28500,AT1G11280,AT1G22890,AT5G57560,AT3G50930,AT1G58270,AT1G23140,AT1G54260,AT1G09500,AT3G50770,AT5G20230,AT1G66540,AT5G52760,AT1G29600,AT1G12400,AT3G01830,AT5G39670,AT5G24150,AT5G26920,AT4G23150,AT2G32680,AT1G14250,AT1G80960,AT5G10760,AT2G30770,AT4G04500,AT1G04980,AT5G18470,AT4G11890,AT5G63020,AT3G61190,AT4G04490,AT4G39670,AT5G02180,AT5G24530,AT3G62950,AT1G33720,AT1G13340,AT4G03450,AT1G66230,AT5G17890,AT1G31600,AT4G24570,AT3G47480,AT5G11920,AT3G44970,AT3G26320,AT5G22380,AT5G05750,AT1G61340,AT4G29520,AT1G27540,AT5G22300,AT1G51800,AT5G05060,AT4G21830,AT1G53885,AT5G56870,AT1G57630,AT3G01290,AT1G35560,AT5G55450,AT3G51330,AT5G01350,AT1G13650,AT4G21850,AT1G75040,AT3G22600,AT1G73530,AT5G25040,AT4G20860,AT2G44240,AT2G40000,AT3G57240,AT5G20960,AT5G17300,AT1G59124,AT3G45860,AT4G16690,AT5G60950,AT1G27730,AT3G48640,AT1G68050,AT1G59900,AT2G20145,AT1G10340,AT4G23310,AT2G18680,AT1G48260,AT5G24420,AT2G46400,AT1G43910,AT3G52400,AT5G10400,AT3G07520,AT1G66920,AT1G51270,AT1G65370,AT2G26560,AT5G03340,AT5G10380,AT1G43170,AT1G01390,AT1G79000,AT1G15790,AT1G21240,AT2G24160,AT4G00050,AT5G25120,AT1G21130,AT1G80840,AT1G66970,AT1G67970,AT4G14365,AT1G51890,AT5G28770,AT1G63350,AT1G78290,AT3G26220,AT5G51620,AT1G15010,AT5G46490,AT5G66400,AT1G54050,AT2G05540,AT3G51440,AT5G18670,AT1G76240,AT1G16260,AT5G52810,AT2G36130,AT1G19510,AT1G57770,AT2G13810,AT2G18690,AT1G10910,AT1G66520,AT3G26830,AT1G72240,AT1G15890,AT5G15980,AT2G41100,AT1G62430,AT5G50200,AT5G58310,AT1G21550,AT4G12720,AT1G58150,AT1G70000,AT1G69526,AT1G23020,AT5G11580,AT2G32800,AT1G58380,AT4G23260,AT1G69550,AT1G63090,AT2G43510,AT1G58420,AT4G37150,AT3G26230,AT1G59720,AT2G40400,AT1G77510,AT4G01720,AT3G16530,AT3G22060,AT1G72890,AT1G68620,AT5G42760,AT1G70690,AT5G55050,AT1G69840,AT4G27450,AT5G23240,AT4G29780,AT3G13950,AT1G20810,AT4G23810,AT5G44580,AT1G55960,AT5G02820,AT1G47270,AT1G03410,AT5G01610,AT1G73805,AT3G13790,AT3G02840,AT4G39030,AT1G45170,AT5G08565,AT3G52430,AT3G13610,AT4G23220,AT5G03160,AT5G19730,AT1G60730,AT4G22753,AT4G12470,AT1G74360,AT3G62960,AT4G26150,AT2G25000,AT1G28110,AT1G22400,AT1G05200,AT1G14360,AT5G38900,AT5G52740,AT4G36470,AT4G27280,AT4G00970,AT1G24240,AT1G26560,AT5G10620,AT5G24570,AT3G49160,AT1G65390,AT4G23140,AT1G34210,AT4G24190,AT1G59590,AT1G49630,AT1G30410,AT1G23710,AT4G38560,AT4G01590,AT1G30900,AT3G13100,AT5G16220,AT4G25110,AT5G67340,AT5G22510,AT5G50915,AT5G24850,AT3G60420,AT1G73540,AT1G62850,AT1G10150,AT1G73060,AT1G69530,AT1G20693,AT2G05160,AT2G02810,AT2G26400,AT1G65950,AT5G43910,AT5G45340,AT3G60540,AT5G10695,AT3G62600,AT1G69523,AT1G23830,AT2G43290,AT1G76530,AT1G64950,AT1G65400,AT1G56060,AT5G27270,AT1G66880,AT1G62510,AT1G63580,AT2G29350,AT1G02220,AT4G23610,AT1G20350,AT1G49650,AT3G18250,AT4G37610,AT1G19080,AT1G29610,AT5G50630,AT4G04540,AT1G04800,AT1G09080,AT3G45130,AT3G49780,AT5G44020,AT5G40780,AT5G02490,AT2G41640,AT4G10120,AT4G36030,AT4G32870,AT1G12020,AT1G06690,AT1G21050,AT2G27080,AT1G33560,AT3G25600,AT2G31880,AT1G21010,AT3G03990,AT3G08970,AT5G58150,AT1G09680,AT3G01960,AT5G64870,AT4G28390,AT1G04600,AT1G17190,AT5G53050,AT3G57460,AT3G26210,AT1G65690,AT1G56120,AT1G27770,AT1G23550 PESARESI_STN7-1PSAD1-1MUTANT/WS-2_DN Down-regulated in the stn7-1 psae1-3 mutant compared to WS-2. (Table S7 PubmedID:19706797) AT2G22900,AT5G07030,AT5G19090,AT1G68220,AT2G14890,AT3G19370,AT4G39210,AT3G46770,AT1G27210,AT1G55360,AT2G11810,AT3G54400,AT5G03720,AT1G65900,AT2G22970,AT4G34770,AT5G16990,AT5G05950,AT3G06035,AT2G31160,AT5G27220,AT1G19570,AT5G01180,AT1G36940,AT5G65810,AT4G08685,AT3G05020,AT5G20700,AT5G25390,AT5G14780,AT3G05690,AT3G48410,AT1G31335,AT1G75300,AT5G15780,AT5G51850,AT2G26690,AT5G11110,AT5G46690,AT5G57850,AT1G17460,AT2G14520,AT3G23470,AT1G13250,AT1G78790,AT1G76820,AT1G20440,AT1G48280,AT5G25140,AT1G52190,AT1G19690,AT1G74290,AT5G43460,AT2G34490,AT1G69420,AT1G07380,AT1G64390,AT2G47930,AT2G39920,AT1G71990,AT1G18710,AT1G72810,AT4G01480,AT1G18400,AT2G14900,AT5G04530,AT4G13560,AT1G50480,AT4G04630,AT1G07610,AT4G01410,AT5G01300,AT1G19640,AT1G64460,AT4G14680,AT1G44750,AT3G26960,AT1G20560,AT4G12880,AT2G41820,AT1G61370,AT4G24010,AT2G32990,AT3G13980,AT3G29590,AT1G74670,AT1G29410,AT4G11290,AT2G19810,AT3G14310,AT4G34590,AT1G62480,AT1G07430,AT5G42860,AT2G29730,AT1G55120,AT5G62920,AT5G28300,AT3G55310,AT1G78970,AT3G49680,AT5G26280,AT1G17700,AT5G07700,AT1G48100,AT4G04610,AT5G52310,AT2G07707,AT1G72790,AT2G40435,AT1G18590,AT4G22490,AT3G06590,AT5G12110,AT4G04750,AT3G16470,AT2G16750,AT3G16770,AT1G31230,AT3G19850,AT1G17745,AT1G78060,AT1G30510,AT4G23600,AT2G27130,AT1G34460,AT3G47590,AT3G52180,AT2G21590,AT1G20840,AT4G30650,AT2G46640,AT4G39940,AT3G46490,AT1G17250,AT1G77590,AT3G48550,AT2G33380,AT5G58390,AT5G02760,AT5G08260,AT1G01670,AT1G50280,AT3G28130,AT1G10970,AT1G76180,AT5G35480,AT4G13770,AT1G31690,AT2G28900,AT3G29035,AT1G23120,AT2G22170,AT5G13460,AT5G11930,AT4G38580,AT4G19120,AT4G33490,AT1G78820,AT5G19210,AT1G15000,AT1G62560,AT1G52410,AT1G29980,AT1G28570,AT5G08640,AT3G44990,AT1G26920,AT1G21110,AT3G17850,AT1G70430,AT1G78370,AT5G19600,AT5G18130,AT2G15960,AT5G23570,AT2G46650,AT5G44530,AT1G12080,AT3G22740,AT1G57590,AT3G12580,AT5G65010,AT3G50440,AT1G31180,AT4G35770,AT5G50335,AT5G07460,AT5G22460,AT5G63810,AT5G24310,AT1G31710,AT4G12030,AT5G39610,AT1G29050,AT3G45160,AT1G09350,AT3G23090,AT4G39510,AT2G43100,AT5G03230,AT1G11210,AT1G70830,AT3G12520,AT1G55200,AT3G58990,AT1G14070,AT5G15420,AT4G21650,AT1G13470,AT5G16380,AFFX-AThal-5SrRNA,AT1G21120,AT3G15650,AT1G34180,AT1G78490,AT1G66430,AT1G16410,AT1G62800,AT1G77960,AT5G13930,AT3G19710,AT5G64640,AT5G32460,AT5G65090,AT1G79460,AT1G31200,AT3G51240,AT5G43270,AT1G29395,AT1G56600,AT1G21440,AT1G60270,AT3G14450,AT4G09020,AT1G48750,AT1G54120,AT2G42610,AT1G78450,AT5G14920,AT4G04830,AT1G56650,AT5G59320,AT1G73260,AT1G11580,AT1G65860,AT1G50290,AT5G24240,AT5G54060,AT4G03060,AT1G16030,AT1G58025,AT4G38340,AT5G64080,AT3G08860,AT5G04950,AT3G03190,AT1G52400,AT5G05270,AT5G24780,AT5G48850,AT1G02300,AT1G52040,AT3G14210,AT4G15630,AT2G39330,AT1G28290,AT5G25110,AT1G63540,AT1G23850,AT1G60810,AT4G14090,AT1G75780,AT1G80130,AT1G52000,AT1G20490,AT5G15360,AT1G09420,AT1G62290,AT4G22870,AT5G17220,AT5G19470,AT3G49580,AT1G76720,AT4G15620,AT1G03495,AT1G27030,AT1G61800,AT5G42800,AT5G23020,AT1G54040,AT1G66690,AT1G73330,AT1G68830,AT4G28750 PESARESI_WS-2/COL-O_UP Up-differentially regulated in WS-2 compared to Col-O. (Table S9 PubmedID:19706797) psaC,AT1G66690,AT2G39920,AT1G54040,ndhD,ycf4,rps15,ndhG,accD,orf77.1,ndhE,petG,AT1G61800,ATpI,AT2G15560,AT1G76720,AT1G02300,rps14,psbG,AT1G09420,psaA,AT1G50290,ndhJ,ATpH,AT1G56300,AT5G63810,rpl20,ycf10_cemA,AT5G44420,AT5G04950,rpoB,AT3G60980,ATpF,AT3G49580,psbB,AT5G62000,AT5G23020,AT4G16146,AT1G77760,AT3G47160,AT2G47670,AT1G49720,psbD,AT4G04330,psbA,rpoC2,ndhH,AT1G01330,AT5G15360,AT4G38610,AT3G62550,AT1G63540,AT5G65010,AT1G21120,AT5G19470,AT1G73330,rps16,AT4G00640,AT3G46370,AT2G46350,AT2G13960,AT2G03020,AT4G09020,AT2G21210,petD,AT2G15890,ndhB.1,AT3G17850,AT1G01770,ATpA,psaI,AT1G60810,AT4G34890,AT2G16590,AT5G53460,AT5G23570,AT5G65090,ycf6,AT4G13560,AT2G21660,AT1G58025,AT1G70420,AT5G02860,AT5G16380,AT5G58310,AT1G22770,AT5G26340,AT4G34950,rps2,rps4.chloroplast,AT2G28900,AT1G31200,AT1G16030,AT1G69440,AT5G24240,AT2G27170,AT2G19120,AT2G43160,AT4G12280,AT1G69870,AT1G20490,AT1G61370,AT5G14920,AT5G64640,AT3G62150,AT1G17460,AT3G14330,AT1G34260,rpl14,AT4G33490,AT5G25110,AT2G28840,AT1G13470,AT5G02810,AT3G56720,AT1G72440,AT1G20010,AT1G24280,AT3G10490,AT1G78450,AT4G34830,AT4G38300,AT2G15040,AT1G21310,AT5G29000,AT1G23850,AT5G15780,psbT,psbH,AT3G60380,AT3G23910,AT3G51770,AT5G60410,AT5G47250,AT5G55570,AT2G42600,AT5G64860,AT5G53480,AT4G22280,AT4G38840,AT1G10970,AT2G45560,AT1G10760,AT1G14070,AT4G10930,AT3G08860,AT4G01300,AT1G34180,AT1G71210,AT3G03380,AT5G45840,AT5G27010,AT3G23470,AT2G16480,AT1G78600,orf107h,AT2G45510,AT2G45660,AT4G14230,AT5G45040,AT5G39760,AT5G15420,AT4G25500,AT2G21300,AT2G07370,AT1G50280,AT1G15510,AT2G26560,AT5G63430,AT3G18080,AT5G44180,AT3G12980,AT2G15620,rps18,AT4G25730,AT1G74290,AT2G40130,mATK,AT5G25140,AT3G12520,AT1G03740,AT3G19730,AT1G26920,AT1G08420,AT1G20070,AT2G40610,AT5G47430,AT1G54130,AT5G64510,AT4G02390,AT3G44990,AT3G50210,ycf2.1,AT3G05030,AT5G02760,AT3G06800,AT5G27240,AT2G39480,AT2G39190,AT5G67420,AT3G51660,AT4G00720,AT1G24120,AT2G47390,AT1G49230,AT2G40840,AT4G20820,AT4G02480,AT5G04570,AT3G47860,rpoC1,AT1G79460,AT1G48840,AT5G32460,rpl33,AT3G59290,AT3G21080,AT5G18130,AT5G57340,AT5G14720,AT3G59580,AT1G43620,AT5G17910,AT2G46240,AT5G27280,AT1G62290,AT1G80130,clpP,AT3G12610,AT1G34460,AT4G04740,AT4G15440,AT5G25070,AT3G04910,AT1G28570,AT5G42540,AT5G51850,AT1G17250,AT5G40480,AT4G30650,ycf5,AT1G79200,AT5G65240,AT3G05630,AT1G48330,AT1G18710,AT1G75190,AT4G38340,AT3G53800,AT4G05150,AT3G24870,AT4G00340,AT4G03510,AT2G27920,AT5G61910,AT4G04710,AT3G56060,AT1G73960,AT1G55200,AT4G26370,cox1,AT3G55450,AT3G21175,AT2G32880,AT1G27630,AT3G47890,AT5G19420,AT1G07610,AT1G73260,AT1G29440,AT1G48090,AT4G02460,AT1G10270,AT5G35480,AT4G02370,AT4G38850,AT1G31120,AT5G03730,AT1G69200,AT5G04110,AT5G11110,AT2G13370,AT4G10710,AT1G64460,AT2G25650,AT4G18440,AT1G10090,AT4G03390,AT4G03820,AT1G03160,AT5G45650,AT1G29510,AT1G77590,AT1G05460,AT2G39250,AT5G42620,AT5G19210,AT1G70810,AT3G44820,AT5G45460,AT2G42890,AT2G27200,AT4G12750,AT2G37850,AT1G72790,AT2G33390,AT5G16680,AT1G28420,AT3G01850,AT1G14340,AT3G05850,AT1G70430,AT5G05840,AT5G49900,AT3G63070,AT2G25490,AT3G55320,AT5G39590,AT2G26440,AT2G29670,AT3G46490,AT4G12760,AT1G67660,AT3G30180,AT4G19240,AT5G39790,AT4G32340,AT3G18060,AT2G07707,AT5G03470,AT5G54960,AT5G61040,AT1G49560,AT1G21110,AT5G64420,AT2G39670,AT3G03930,AT5G50200,AT5G16730,AT1G23390,AT2G25760,AT3G47730,AT3G61000,AT5G14950,AT2G29090,AT3G16785,AT3G63110,AT1G28210,AT4G25610,AT1G52200,AT2G17440,AT4G00790,AT4G19600,AT3G46970,AT1G52320,AT5G41260,AT1G51090,AT2G07722,AT2G17710,AT5G47580,AT3G62660,AT1G09990,AT3G01310,AT4G02260,AT3G20300,AT1G20190,AT2G22400,AT1G20980,AT3G18910,AT5G58040,AT3G48410,AT3G60400,AT1G20560,AT4G00450,AT1G08680,AT1G60960,AT4G36400,AT4G23540,AT1G21640,AT3G50500,AT1G29430,AT1G01320,AT2G15790,AT2G11810,AT3G54960,AT3G50370,AT5G48850,AT1G74940,AT4G30660,AT5G52630,rps8,AT1G15940,AT5G08570,AT2G24120,AT1G04300,AT4G03400,AT1G01670,AT3G48990,AT2G46060,AT3G57430,AT1G55020,AT4G03500,AT1G80020,AT5G27320,AT1G51610,AT3G08670,AT1G07280,AT3G27700,AT1G71710,AT5G10370,AT3G62630,AT5G56270,AT3G44200,AT5G17690,AT2G22840,AT1G67550,AT1G06980,AT2G46010,AT2G01400,AT1G23230,AT1G21750,AT3G05640,AT1G04990,AT1G79280,AT3G50740,AT1G54120,AT1G55920,AT1G34380,AT4G32350,AT5G05570,AT3G51120,AT4G09730,AT1G13270,AT5G13540,AT4G36630,AT5G40850,AT2G40750,AT5G67390,AT3G47090,AT2G43170,AT3G61130,AT1G64470,AT2G41560,AT1G51940,AT5G05710,AT2G15960,AT4G26780,AT2G42610,AT3G14860,AT2G21440,AT3G26020,AT5G26280,AT1G64900,AT5G24310,AT4G22540,AT5G63800,AT2G48110,AT3G15000,AT4G28450,AT1G80550,AT3G23280,AT2G16890,AT5G56240,AT5G64330,AT2G40870,AT1G63700,AT1G70820,AT3G26170,AT5G47010,AT4G34590,AT1G80480,AT2G28720,AT1G66980,AT2G36720,AT5G54100,AT4G16180,AT5G02230,AT1G20630,AT5G19010,AT5G47240,AT3G20130,AT5G63610,AT1G56350,AT2G14120,AT5G04460,AT1G50030,AT3G50700,AT1G19690,AT5G46330,ccb382,AT4G14270,AT5G41620,AT1G77460,AT3G46290,AT1G03060,AT4G37190,AT5G46270,AT2G29190,AT4G00630,AT3G55200,AT4G36870,AT2G32100,AT5G41410,AT2G01170,AT1G31230,AT5G56650,AT2G07698,AT1G54490,AT4G02990,AT4G33700,AT4G04830,AT5G64800,AT1G74850,AT3G19960,AT1G74670,AT4G30110,AT2G48160,AT3G13690,AT5G56250,AT1G15780,AT2G40650,AT1G80310,AT1G27320,AT1G23120,AT3G62860,AT5G12950,AT5G18750,AT1G68560,AT1G02890,AT5G13030,AT4G32570,AT3G22380,AT5G03240,AT5G57160,AT5G24160,AT1G70300,AT2G47410,AT1G08550,AT4G39450,AT5G45480,AT5G20730,AT1G68790,AT3G10630,AT2G22125,AT5G54250,AT5G40450,AT5G38150,AT1G71300,AT3G04740,AT5G06690,AT5G04580,AT2G16710,AT3G07610,AT4G02220,AT1G53260,AT3G53410,AT1G26620,AT4G32850,AT5G11610,AT5G20470,AT1G21580,AT1G80410,AT5G03180,AT1G03310,AT1G17440,AT1G53700,AT5G12050,AT2G04530,AT2G39900,AT1G17680,AT5G14960,AT5G65310,AT1G09230,AT5G18060,AT1G57590,AT1G63500,AT1G73710,AT4G35800,AT1G64890,AT5G43860,AT2G15900,AT3G20630,AT5G16820,AT4G35290,AT2G47890,AT1G20960,AT3G07810,AT5G01400,AT4G19170,AT2G43650,AT1G20840,AT2G43200,AT1G10170,AT2G15820,AT5G35570,AT5G63420,AT3G02260,AT2G39150,AT5G45160,AT1G32810,AT2G32850,AT4G34920,AT3G46770,AT3G15150,AT3G11450,AT5G07820,AT1G17455,AT4G38460,rpl36,AT5G28910,AT1G22540,AT4G25520,AT5G56950,AT2G20580,AT1G28610,AT5G45380,AT3G61900,AT2G15690,AT1G44910,AT1G59610,petA,AT5G53160,AT5G46480,AT4G38550,AT5G23880,AT5G51570,AT3G25905,AT3G06860,ndhF,AT3G52180,AT5G09930,AT3G01400,AT5G08440,AT1G67680,AT5G67570,AT2G47600,AT1G50150,AT2G21590,AT2G35690,AT3G10450,AT2G46920,AT2G42400,AT2G25730,AT4G29440,AT5G12190,AT1G21080,rpl23.1,AT3G07660,AT1G75780,AT3G62010,AT2G45910,AT4G30720,AT1G03080,AT1G63670,AT4G33960,AT2G42390,AT2G31360,rpl22,AT3G13290,AT3G54280,AT2G39795,AT5G01980,AT1G01960,AT4G36860,AT3G59040,AT5G64390,AT1G13980,AT2G35800,AT5G05090,AT5G16950,AT4G18240,AT3G01320,AT2G25625,AT1G08620,AT1G05960,AT5G01820,AT1G61040,AT2G38465,AT1G32800,AT5G45250,AT4G24270,AT1G33970,AT4G30060,AT5G58900,AT3G06810,AT1G74250,AT5G26780,AT1G44750,AT1G63940,AT4G12300,AT1G33060,AT3G52070,AT1G14330,AT5G06120,AT3G43670,AT3G55270,AT4G27440,AT3G08850,AT3G02170,AT3G19850,AT4G15090,AT5G59540,AT1G15910,AT3G51750,AT1G60210,AT2G17520,AT1G76660,AT1G01780,AT2G16250,AT4G17330,AT3G14450,AT3G53990,AT3G16010,AT5G46070,AT3G59940,AT2G31450,AT1G58220,AT3G61880,AT1G76270,AT2G38970,AT3G61690,AT1G77000,AT4G18670,AT1G04940,AT4G28080,AT5G59980,AT5G24710,AT5G18770,AT5G26830,AT2G42280,AT5G51300,AT2G18300,AT5G27930,AT1G70320,AT5G19670,AT3G27670,AT2G31230,AT4G31850,AT1G12780,AT1G30240,AT3G13330,AT4G15810,AT1G69360,AT5G02880,AT3G13682,AT1G60140,AT4G38050,AT5G04240,AT5G51350,AT4G19120,AT3G52140,AT5G27380,AT4G39090,AT4G02880,AT5G56150,AT4G38580,AT5G26570,AT1G70160,AT1G06160,AT5G14540,AT5G07290,AT1G22060,AT5G04360,AT1G76820,AT4G11360,AT5G62630,AT5G15680,AT2G30800,AT5G44290,AT1G04140,AT1G29500,AT5G41770,AT4G34040,AT1G55500,AT4G03190,AT5G17270,AT3G14230,AT2G42790,AT1G75420,AT1G09620,AT5G33280,AT4G17570,AT5G58575,AT3G07380,AT3G19770,AT4G32330,AT3G53000,AT2G27100,AT1G10080,AT3G52890,orf107c,AT4G25880,AT4G19390,AT3G48500,AT2G21540,AT1G75850,AT4G17080,AT1G50700,AT1G76320,AT3G55410,AT2G34350,AT4G36270,AT5G49760,AT5G41010,AT1G50500,AT1G07380,AT3G28550,AT4G21430,AT1G13110,AT4G16490,AT5G47480,AT1G13950,AT5G09510,AT5G15400,AT3G04580,AT5G03230,AT3G27170,AT1G75340,AT5G55200,AT5G14780,AT1G18810,AT1G19360,AT5G03720,AT2G21380,AT1G20780,AT3G49500,AT3G46960,AT5G41670,AT4G24800,AT5G62050,AT5G14270,AT2G20180,AT4G36190,AT3G52390,AT4G16590,AT5G65210,AT1G65280,AT1G24150,AT3G57410,AT2G41830,AT4G25970,AT5G48470,AT3G14067,AT1G34220,AT3G08840,AT4G30160,AT3G14620,AT2G02160,AT1G22070,AT1G54920,AT2G47250,AT3G23520,AT1G08650,AT1G64570,AT1G68490,AT3G19515,AT4G14920,AT4G30190,AT3G56050,AT4G37800,AT3G01780,AT1G26260,AT3G05660,AT1G78100,AT5G26860,AT3G19750,AT5G35980,AT4G29940,AT5G14530,AT1G79570,AT5G08120,AT5G61530,AT5G59680,AT1G47710,AT5G57630,AT1G74120,AT3G46930,AT2G41220,AT2G34200,AT2G18220,AT4G33240,AT5G55990,AT2G18510,AT5G55860,AT5G23110,AT1G07430,AT1G77510,AT5G12290,AT5G55140,AT4G02470,AT1G36160,AT5G20830,AT3G27300,AT1G15150,AT5G61780,AT3G05165,AT4G38600,AT1G09660,AT1G09530,AT1G76810,AT4G36680,AT2G19930,AT1G12930,AT3G61780,AT4G24290,AT1G48600,AT3G60190,AT5G02310,AT2G44760,AT2G24350,AT1G71410,AT5G50210,AT5G62350,AT1G54220,AT5G19440,AT4G31080,AT1G04860,AT4G18630,AT1G18160,AT1G10920,AT3G43510,AT3G02650,AT1G01440,AT1G67930,AT5G62920,AT3G59020,AT4G00800,AT3G11130,AT1G13000,AT5G61930,AT2G39140,AT5G09400,AT5G67480,AT2G28360,AT5G27210,AT1G54440,AT1G11660,AT1G05910,AT1G50620,AT5G63120,AT5G13950,AT1G71330,AT2G20000,AT2G46250,AT2G36480,AT3G44970,AT1G01010,AT4G16650,AT1G51440,AT4G03410,AT3G07260,AT3G12040,AT1G76460,AT4G23040,AT1G62310,AT1G45160,AT3G56080,AT5G08580,AT1G69420,AT3G07020,AT1G76390,AT3G09540,AT4G20020,AT1G26960,AT5G45820,AT5G18590,AT3G23310,AT2G26200,AT2G20960,AT1G71030,AT3G47320,AT2G20050,AT1G77300,orf275,AT1G50950,AT4G27070,AT5G03910,AT4G18520,AT2G18540,AT5G01210,AT3G56585,AT5G54650,AT1G30000,AT2G23890,AT2G01570,AT5G22760,AT4G32760,AT1G43850,AT5G11670,AT4G29510,AT3G48050,AT2G36145,AT1G34300 PESARESI_WS-2/COL-O_DN Down-differentially regulated in WS-2 compared to Col-O. (Table S9 PubmedID:19706797) AT5G65070,AT2G04080,AT5G35450,AT4G19530,AT5G51890,AT2G27720,AT3G29575,AT1G20850,AT3G25010,AT5G22940,AT1G75470,AT5G41080,AT1G65060,AT4G10955,AT2G34930,AT5G24560,AT5G55790,AT4G19510,AT5G48180,AT3G60160,AT1G79820,AT1G71100,AT3G29240,AT2G41380,AT4G30460,AT1G16390,AT3G54820,AT5G54350,AT4G23870,AT5G53050,AT1G69580,AT1G74890,AT3G47640,AT5G42050,AT3G46980,AT5G18430,AT3G27060,AT1G67340,AT3G54500,AT5G46510,AT5G11740,AT1G29330,AT1G59600,AT4G14690,AT5G38700,AT4G31530,AT3G29770,AT1G64150,AT4G16450,AT4G20470,AT3G60070,AT4G17390,AT1G08560,AT2G37970,AT1G66180,AT4G35900,AT3G49160,AT5G50240,AT1G27950,AT1G13340,AT1G64200,AT3G23240,AT5G13190,AT5G45770,AT5G41460,AT1G57943,AT3G10610,AT3G19940,AT2G44380,AT3G12170,AT1G34310,AT1G66370,AT1G12020,AT5G22540,AT3G26290,AT3G09800,AT2G24020,AT1G68230,AT4G23140,AT1G67865,AT3G19680,AT1G56150,AT2G32150,AT5G50130,AT5G01015,AT4G25810,AT2G37180,AT2G30150,AT1G29660,AT1G51270,AT2G44130,AT1G61250,AT1G57630,AT3G50900,AT5G26330,AT2G40010,AT2G31440,AT3G16150,AT3G16670,AT1G65560,AT5G42570,AT3G22160,AT2G31980,AT4G13900,AT3G10980,AT2G13610,AT4G34990,AT3G20120,AT4G13410,AT5G02450,AT5G50550,AT3G27610,AT3G21550,AT2G30670,AT3G49360,AT3G02040,AT3G17615,AT1G66620,AT1G35780,AT1G25450,AT2G30010,AT2G40900,AT4G27940,AT3G28210,AT2G31880,AT5G54980,AT2G15050,AT1G69510,AT2G06850,AT4G18890,AT4G35280,AT3G26200,AT3G50520,AT5G44030,AT4G31840,AT1G52910,AT2G16990,AT3G04920,AT5G26230,AT2G28210,AT1G52340,AT1G34210,AT4G30470,AT1G05340,AT4G20030,AT3G19970,AT3G02640,AT5G51630,AT1G04270,AT2G32765,AT1G73010,AT5G55180,AT3G20670,AT2G21510,AT1G72230,AT1G63530,AT4G01870,AT1G33811,AT1G72950,AT1G43910,AT1G78290,AT5G28060,AT5G44350,AT3G15650,AT1G02400,AT4G08410,AT3G54400,AT3G46040,AT1G24575,AT3G18960,AT1G26770,AT4G25620,AT1G66810,AT5G11160,AT2G37130,AT5G24850,AT2G47930,AT4G18100,AT5G52250,AT4G16380,AT4G01680,AT3G55840,AT2G05600,AT3G19240,AT2G13570,AT1G19080,AT1G32100,AT3G16050,AT4G12310,AT5G62570,AT1G69080,AT5G44050,AT2G44200,AT1G27820,AT1G62520,AT3G54200,AT2G45400,AT1G65950,AT5G46080,AT4G16850,AT2G26190,AT4G39330,AT3G53680,AT2G37590,AT4G28780,AT2G35710,AT5G47960,AT1G21050,AT5G26030,AT4G23880,AT2G04780,AT3G59080,AT4G04540,AT2G43800,AT1G33560,AT3G19100,AT1G63720,AT5G22460,AT1G47270,AT3G17420,AT2G05940,AT5G66070,AT1G70000,AT3G13520,AT4G28250,AT1G26800,AT4G23900,AT1G27770,AT1G63420,AT2G14560,AT1G65500,AT1G35560,AT2G18210,AT1G18250,AT1G07770,AT5G10480,AT3G28140,AT5G20270,AT5G07440,AT5G44060,AT5G50565,AT5G06630,AT5G50730,AT1G23830,AT2G32800,AT2G46590,AT5G58430,AT4G15210,AT2G44080,AT3G16530,AT3G23080,AT5G50630,AT2G41250,AT5G04760,AT4G33160,AT1G59550,AT4G03450,AT1G18540,AT1G58150,AT1G19770,AT1G44830,AT5G59740,AT2G47560,AT5G17330,AT5G16340,AT5G65000,AT5G50530,AT3G24520,AT2G35760,AT3G24500,AT4G21310,AT5G05270,AT3G14240,AT5G53150,AT1G09200,AT4G02380,AT4G25630,AT1G59860,AT2G23120,orf111b,AT4G39840,AT1G23550,AT1G62420,AT3G05600,AT2G34810,AT3G47480,AT5G47220,AT2G24850,AT1G14480,AT4G01440,AT1G62480,AT1G66230,AT2G24190,AT4G23220,AT4G16500,AT4G38950,AT1G05710,AT5G19240,AT5G47610,AT2G32210,AT1G64950,AT1G23020,AT3G23840,AT1G03410,AT4G31800,AT5G10620,AT1G10340,AT5G25040,AT3G44610,AT3G22880,AT5G41700,AT3G55710,AT1G46264,AT2G13790,AT2G14890,AT3G45730,AT3G44735,AT1G24070,AT1G24170,AT3G25290,AT2G30500,AT2G25060,AT1G78080,AT1G50590,AT5G53880,AT1G80080,AT3G47010,AT5G04660,AT4G30430,AT4G35350,AT5G48480,AT1G59900,AT5G47550,AT1G56580,AT1G10560,AT2G21080,AT3G46530,AT3G28540,AT5G46490,AT4G36500,AT2G02850,AT4G37450,AT4G39900,AT3G01960,AT5G46780,AT1G24240,AT1G53170,AT2G27260,AT3G48080,AT5G25260,AT5G37550,AT1G54010,AT1G07135,AT2G01180,AT1G09575,AT4G28040,AT5G17700,AT1G65490,AT5G18150,AT2G38810,AT4G31000,AT1G61890,AT1G72060,AT2G21860,AT2G36830,AT2G02010,AT5G58650,AT5G46710,AT3G54560,AT5G08350,AT3G53190,AT1G60590,AT1G59124,AT2G01850,AT3G14600,AT1G62710,AT4G14610,AT4G14365,AT4G33420,AT5G02180,AT1G51280,AT3G18560,AT3G27360,AT2G17880,AT4G36140,AT3G62260,AT1G67470,AT4G16710,AT1G42990,AT3G54000,AT5G47380,AT5G49520,AT2G07718,AT5G10430,AT1G64360,AT1G63840,AT2G23320,AT1G67880,AT4G37240,AT5G43270,AT3G20470,AT1G73500,AT1G06640,AT1G58380,AT3G45860,AT2G14880,AT1G69840,AT2G45680,AT3G03470,AT2G33580,AT5G63130,AT5G05750,AT3G28420,AT3G57530,AT3G44400,AT3G63330,AT5G24590,AT1G43790,AT1G32640,AT5G22500,AT4G02410,AT3G16240,AT1G01720,AT3G28270,AT3G16360,AT2G23290,AT4G32800,AT4G08110,AT2G21650,AT3G12110,AT4G18780,AT3G22840,AT1G27130,AT5G13490,AT5G67200,AT2G14660,AT4G37290,AT2G41410,AT3G18710,AT3G16470,AT1G75030,AT2G31730,AT1G21460,AT2G36570,AT3G14340,AT5G63020,AT1G06000,AT3G15210,AT4G24130,AT1G27290,AT5G66400,AT4G13100,AT5G22740,AT4G11000,AT5G13100,AT5G62020,AT5G52570,AT5G59870,AT1G17620,AT1G20823,AT4G13810,AT2G05810,AT3G15450,AT1G27100,AT4G33920,AT2G24100,AT5G44580,AT5G16250,AT3G53730,AT2G36130,AT1G02660,AT3G53980,AT1G80960,AT1G31600,AT3G10720,AT1G43170,AT1G13260,AT3G60450,AT1G21010,AT2G32030,AT4G08870,AT1G74440,AT4G35770,AT5G08000,AT1G23205,AT3G08720,AT3G62720,AT3G11650,AT4G08040,AT3G20590,AT4G29030,AT5G20790,AT5G24570,AT2G23590,AT3G14990,AT1G62540,AT4G18970,AT2G23130,AT2G39420,AT3G16770,AT1G67920,AT4G34150,AT5G18670,AT1G66080,AT5G17890,AT3G24890,AT2G27500,AT1G73530,AT3G10190,AT2G24550,AT1G68440,AT2G38530,AT3G12830,AT5G22880,AT5G47070,AT1G63090,AT3G16720,AT1G10640,AT1G27540,AT2G06050,AT5G22580,AT5G56910,AT2G38470,AT1G59590,AT5G22380,AT3G49780,AT5G50570,AT4G12720,AT2G33220,AT5G65360,AT1G51700,AT1G66540,AT3G44720,AT3G48520,AT2G18690,AT4G36520,AT5G49280,AT5G37540,AT1G62510,AT5G62210,AT5G05960,AT1G48260,AT5G11230,AT2G38110,AT3G15760,AT5G22630,AT5G12940,AT5G27420,AT3G06470,AT5G36930,orf262,AT5G56380,AT1G54260,AT1G12520,AT5G05060,AT3G05890,AT3G16430,AT3G29120,AT2G30360,AT2G25735,AT1G06350,AT1G09070,AT1G72900,AT5G43740,AT2G18050,AT1G24020,AT2G25250,AT3G46600,AT4G16870,AT2G32140,AT4G17500,AT2G42760,AT5G47500,AT5G06320,AT5G43760,AT5G67300,AT5G42250,AT1G11850,AT5G03210,AT5G52750,AT3G22060,AT5G15350,AT1G72970,AT2G40140,AT5G01350,AT4G12990,AT2G27310,AT1G23140,AT5G65390,AT3G28180,AT1G30135,AT5G28630,AT3G44890,AT4G34710,AT1G28480,AT3G19030,AT4G02330,AT5G58980,AT4G17030,AT1G21550,AT1G70090,AT3G26230,AT1G01620,AT2G41100,AT1G21910,AT3G06890,AT5G24150,AT2G35870,AT1G06080,AT2G15080,AT2G01890,AT3G28130,AT1G72240,AT3G47295,AT4G00050,AT3G47680,AT1G25400,AT5G16200,AT5G10695,AT5G19730,AT3G49530,AT1G68050,AT5G51620,AT5G19120,AT5G11070,AT1G19020,AT3G28290,AT1G66760,AT3G28220,AT5G47230,AT3G27200,AT3G23730,AT4G02540,AT1G18740,AT1G12010,AT3G54810,AT3G25780,AT4G03210,AT5G10770,AT4G37260,AT2G39650,AT5G62520,AT5G50915,AT1G53885,AT2G23810,AT2G02100,AT2G03710,AT3G19580,AT3G45970,AT2G41640,AT5G01740,AT3G61640,AT3G56880,AT2G26150,AT5G64870,AT1G60190,AT3G45930,AT3G55430,AT4G25490,AT3G25600,AT1G26560,AT3G51860,AT5G28500,AT2G43290,AT1G65190,AT5G26920,AT4G13890,AT2G17040,AT2G46400,AT1G19180,AT1G24140,AT2G26740,AT5G45630,AT2G41010,AT1G17380,AT3G52450,AT5G48490,AT4G39670,AT4G09030,AT2G22500,AT5G36910,AT2G26530,AT3G50930,AT5G56030,AT1G04800,AT4G20480,AT1G12400,AT4G01950,AT5G39670,AT1G72940,AT1G08830,AT1G28370,AT4G21760,AT2G32690,AT2G22880,AT4G25470,AT1G58842,AT4G16880,AT2G15090,AT3G52400,AT5G17880,AT4G24380,AT1G68840,AT5G52760,AT1G05575,AT3G28340,AT5G10400,AT3G46620,AT5G39030,AT4G01250,AT1G12610,AT4G19500,AT1G22890,AT5G59550,AT4G16890,AT2G35930,AT5G45670,AT3G08770,AT5G64260,AT1G56510,AT2G24600,AT1G11280,AT4G17490,AT1G35210,AT3G43740,AT1G63880,AT2G42840,AT2G35290,AT2G28190,AT2G30040,AT3G14210,AT5G20230,AT4G29020,AT1G22190,AT5G40950,AT3G55980,AT1G19210,AT4G11280,AT2G28400,AT1G74450,AT2G44840,AT5G04340,AT5G03350,AT1G58420,AT1G23710,AT5G66650,AT5G17350,AT1G66400,AT2G05380,AT1G57990,AT3G50770,AT3G09870,AT2G34600,AT3G04290,AT5G54490,AT3G47220,AT1G65370,AT3G01830,AT1G35140,AT5G42380,AT3G11010,AT1G72920,AT1G15010,AT4G16140,AT1G66160,AT2G33850,AT3G47340,AT3G04640,AT1G54050,AT1G66500,AT1G61340,AT1G76600,AT1G24996,AT1G23960,AT1G19380,AT3G30720,AT5G37770,AT5G61600,AT1G35612,AT3G46030,AT5G22250,AT3G57450,AT5G59820,AT3G15310,AT3G50060,AT3G21950,AT1G73490,AT2G30020,AT5G51190,AT5G65300,AT4G08950,AT4G16860,AT3G02840,AT3G44260,AT1G35710,AT4G27652,AT1G32920,AT5G24660,AT1G76960,AT1G24793,AT3G50480,AT5G64310,AT4G37610,AT4G27280,AT5G45340,AT2G27080,AT3G44630,AT1G73540,AT5G20630,AT3G48650,AT1G76650,AT1G80840,AT4G27657,AT4G29780,AT1G27730,AT3G61190,AT2G40000,AT1G74930,AT1G58270,AT1G66090,AT4G34410,AT2G32160,AT3G47250,AT4G27654,AT4G24570,AT3G10930,AT1G31580,AT5G57560,AT3G22240,AT1G66100 LORRAIN_PIF4PIF5_UP Up-regulated in pif4pif5-affected genes. FDR<0.05 (Table S1 PubmedID:19619162) AT3G56940,AT3G47650,AT4G14690,AT3G17040,AT4G39710,AT3G08940,AT5G13770,AT1G31330,AT5G64040,AT1G06680,AT2G30520,AT5G11070,AT2G01590,AT2G05070,AT5G13930,AT3G04290,AT3G01500,AT1G29910,AT1G76080,AT4G02530,AT1G53490,AT3G16250,AT3G54050,AT2G21330,AT1G28570,AT1G72610,AT4G01050,AT2G43560,AT2G34430,AT3G54890,AT3G27690,AT5G54270,AT1G15820,AT2G38540,AT3G08770,AT3G63140,AT5G19940,AT1G76100,AT4G27520,AT1G03130,AT4G28750,AT3G16140,AT1G52230,AT1G30380,AT1G08380,AT4G28660,AT4G21280,AT4G05180,AT3G21055,AT3G46780,AT2G42220,AT4G34290,AT2G28605,AT5G55620,AT2G36885,AT1G18060,AT4G37800,AT1G68520,AT4G12550,AT4G09010,AT4G09650,AT2G47450,AT1G75690,AT3G05730,AT1G29660,AT1G56050,AT3G59400,AT5G13630,AT3G14930,AT2G34620,AT1G24020,AT5G48490,AT3G50820,AT5G17230,AT2G03750,AT5G58250,AT1G21500,AT1G74730,AT5G23060,AT5G64940,AT1G58290,AT4G24780,AT2G41680,AT3G48720,AT5G47440,AT2G35260,AT3G01510,AT3G02730,AT1G78370,AT1G20020,AT3G26060,AT3G18890,AT1G33590,AT3G05600,AT4G25100,AT5G51100,AT3G29320,AT3G48730,AT3G49260,AT1G52100,AT5G11450,AT3G15520,AT1G17650,AT2G47590,AT1G03630,AT2G39470,AT3G02670,AT2G20260,AT4G27030,AT5G57345,AT5G16030,AT2G36145,AT2G04039,AT2G23670,AT3G13470,AT3G02380,AT3G45160,AT4G39510,AT3G19480,AT5G18660,AT5G02760,AT2G40020,AT2G41990,AT3G23410,AT4G15910,AT5G05290,AT2G32100,AT3G56980,AT5G24420,AT2G30540,AT3G06470,AT1G51805,AT5G49160,AT3G16000,AT1G74070,AT1G04110,AT2G43550,AT1G11850,AT1G29920,AT2G05100,AT2G34420,AT1G29930 LORRAIN_PIF4PIF5_DN Down-regulated in pif4pif5-affected genes. FDR<0.05 (Table S1 PubmedID:19619162) AT3G59370,AT3G29970,AT5G35940,AT1G62440,AT5G04120,AT3G05890,AT2G41070,AT5G02540,AT4G10150,AT1G77330,AT1G76390,AT1G02340,AT1G19510,AT5G57670,AT2G47270,AT5G02580,AT4G35720,AT5G26270,AT4G21120,AT5G25110,AT1G75450,AT1G67100,AT5G39580,AT1G67860,AT4G12290,AT1G17810,AT3G03470,AT5G14470,AT2G18050,AT1G32560,AT2G35300,AT5G42900,AT4G25580,AT1G21400,AT4G10020,AT1G64660,AT1G29395,AT2G41640,AT4G14130,AT3G59900,AT3G18530,AT4G12510,AT4G22590,AT4G29270,AT5G22500,AT1G06080,AT4G26320,AT5G66590,AT5G02620,AT5G37540,AT4G38400,AT1G02400,AT4G02290,AT4G16780,AT5G15150,AT1G53830,AT1G65310,AT4G38860,AT5G18060,AT4G36110,AT4G13790,AT4G11610,AT2G24300,AT5G17860,AT5G24580,AT2G19660,AT3G54510,AT4G14690,AT2G42870,AT3G15540,AT2G46990,AT4G25260,AT5G12940,AT1G78970,AT4G21850,AT2G28200,AT5G51210,AT2G19970,AT5G23870,AT2G26440,AT5G07030,AT5G64120,AT3G55940,AT1G64640,AT5G38710,AT1G78720,AT1G12070,AT3G54770,AT2G47780,AT5G63650,AT3G05150,AT5G07000,AT5G07010,AT4G30410,AT5G57780,AT1G01390,AT5G67390,AT1G76240,AT1G29195,AT3G55840,AT3G08030,AT5G16030,AT4G16670,AT4G16515,AT4G01250,AT3G01450,AT4G10160,AT4G12280,AT4G12520,AT4G22592,AT5G34780 LORRAIN_GO_PIF4PIF5_UP Up-regulated gene Ontology (GO) terms enriched in the pif4pif5-affected genes. (Table S2 PubmedID:19619162) AT1G03130,AT1G58290,AT1G06680,AT1G08380,AT4G09650,AT2G38540,AT3G50820,AT2G34420,AT5G13930,AT3G17040,AT4G14690,AT2G47450,AT1G03630,AT3G14930,AT1G17650,AT5G49160,AT3G59400,AT1G04110,AT1G15820,AT1G28570,AT1G29660,AT1G29910,AT1G30380,AT1G31330,AT1G52230,AT1G68520,AT1G75690,AT2G05070,AT2G21330,AT2G41680,AT2G43560,AT3G01500,AT3G04290,AT3G08940,AT3G16140,AT3G27690,AT3G46780,AT3G47650,AT3G54050,AT3G54890,AT3G56940,AT3G63140,AT4G05180,AT4G28660,AT4G37800,AT4G39710,AT5G13630,AT5G17230,AT5G54270,AT5G64040,AT1G78370,AT2G39470,AT2G47590,AT3G01510,AT3G13470,AT3G15520,AT3G18890,AT3G19480,AT3G48730,AT4G25100,AT4G27030,AT5G11450,AT5G18660,AT5G48490,AT4G12550,AT2G30520,AT3G02380,AT3G08770 LORRAIN_GO_PIF4PIF5_DN Down-regulated gene Ontology (GO) terms enriched in the pif4pif5-affected genes. (Table S2 PubmedID:19619162) AT1G02340,AT4G21120,AT1G75450,AT1G64660,AT1G29395,AT2G46990,AT1G02400,AT4G13790,AT5G64120,AT4G14690,AT1G53830,AT2G42870,AT3G15540,AT3G59060,AT4G16780,AT4G38400,AT5G18060,AT4G38860,AT4G36110,AT1G76390,AT2G26440 LEE_TF_GFP-MARKER_ROOT_UP Up-regulated genes of top expression level in analysis of transcription factor (TF) by using GFP marker in root microarray (Table S3 PubmedID:16581911) AT5G12870,AT1G71930,AT1G08930,AT4G27410,AT5G24800,AT3G05150,AT4G28140,AT4G36160,AT1G44830,AT1G69490,AT5G17800,AT1G07640,AT3G43430,AT1G71692,AT4G32880,AT2G18380,AT5G60690,AT5G14750,AT4G37940,AT2G22850,AT1G68640,AT3G20880,AT5G15150,AT1G52150,AT5G20240,AT1G36060,AT3G61850,AT5G60200,AT3G25710,AT4G05170,AT2G37590,AT5G40330,AT1G43700,AT2G28810,AT3G29035,AT2G46410,AT5G65790,AT4G32710,AT5G43040,AT4G00940,AT3G49760,AT2G34710,AT2G28550,AT5G61890,AT1G79840,AT4G21340,AT3G48100,AT1G77200,AT5G52170,AT1G80590,AT1G30650,AT2G37950,AT1G30490,AT4G28890,AT1G14580,AT1G74080,AT2G37260,AT4G36740,AT5G58010,AT1G68130,AT5G19790 DEVOS_M.PERSICAE-FEEDING_SALIVA-INFILTRATION_UP Induced by both M. persicae feeding (De Vos et al. 2005) and saliva infiltration (Table 1 PubmedID:19558622) AT2G02990,AT2G29350,AT4G35770,AT5G06720,AT3G26830,AT3G30775,AT3G57260,AT4G02380,AT3G25010,AT1G61100,AT1G20440,AT5G57560,AT4G23190,AT5G01810,AT2G26980,AT2G32800,AT1G70690,AT4G18170,AT5G43270,AT5G67300,AT2G38940,AT4G22470,AT3G23550,AT1G15670,AT5G25350,AT3G47340,AT5G54510,AT1G02850,AT4G10500,AT1G60140,AT1G10550,AT1G50040,AT5G52390,AT4G15610,AT4G27450,AT4G08950,AT1G68110,AT4G28085,AT1G28330,AT4G01870,AT2G17740,AT1G69360,AT1G43910,AT2G30930,AT2G07777,AT2G47440,AT1G05340,AT1G78410,AT5G22920,AT1G05575,AT1G72060,AT2G28630 DEVOS_M.PERSICAE-FEEDING_SALIVA-INFILTRATION_DN Suppressed by both M. persicae feeding (De Vos et al. 2005) and saliva infiltration (Table 2 PubmedID:19558622) AT3G42570,AT5G67280,AT3G17640,AT3G14720,AT3G04030,AT1G18330,AT1G60590,AT3G44990,AT1G56430,AT5G18660,AT2G22190,AT4G35250,AT3G48460,AT1G23205,AT5G01015,AT4G15830,AT1G49840,AT1G14345,AT3G01060 DEVOS_24H_M.PERSICAE-FEEDING_SALIVA-INFILTRATION_UP Up-regulated 24 hours after infiltration of M. persicae saliva and their expression frofile after M. persicae feeding. (Table S1 PubmedID:19558622) AT1G61800,AT3G54700,AT2G02990,AT2G29350,AT4G35770,AT1G50040,AT4G22470,AT3G47340,AT5G52390,AT1G80130,AT3G47420,AT4G15610,AT5G06720,AT4G27450,AT4G08950,AT4G18170,AT3G26830,AT3G30775,AT5G54510,AT1G02850,AT3G57260,AT1G15670,AT3G61990,AT1G62510,AT2G34490,AT1G68110,AT4G28085,AT2G38870,AT5G22460,AT3G15510,AT5G01810,AT4G10500,AT1G28330,AT4G02380,AT4G28390,AT2G33380,AT1G68550,AT2G26980,AT5G01520,AT4G01870,AT3G23550,AT2G32800,AT5G43270,AT3G25010,AT2G17740,AT1G69360,AT1G43910,AT2G30930,AT1G60140,AT5G67300,AT1G61100,AT5G07920,AT2G47440,ATMG01090,AT5G24870,AT1G17745,AT1G05340,AT5G25350,AT1G10550,AT1G21920,AT1G78410,AT5G22920,AT1G05575,AT4G39210,AT1G79270,AT5G16520,AT1G72060,AT1G20440,AT3G07360,AT4G20070,AT2G40435,AT5G57560,AT4G23190,AT3G13672,AT4G05590,AT1G70690,AT3G20250,AT2G28630 DEVOS_24H_M.PERSICAE-FEEDING_SALIVA-INFILTRATION_DN Down-regulated 24 hours after infiltration of M. persicae saliva and their expression profile after M. persicae feeding (Table S2 PubmedID:19558622) AT1G60590,AT1G63310,AT5G20630,AT1G06830,AT1G23205,AT3G05730,AT5G51890,AT1G33080,AT5G01015,AT2G47880,AT3G62020,AT5G67280,AT3G44990,AT5G25840,AT3G04030,AT5G20030,AT1G56430,AT4G15830,AT4G33270,AT1G33811,AT1G78580,AT3G17640,AT3G62820,AT2G01950,AT3G20570,AT4G12430,AT4G16447,AT1G18330,AT5G18660,AT1G68500,AT1G49840,AT2G22190,AT2G38080,AT5G24000,AT4G35250,AT2G28410,AT3G48460,AT2G40480,AT5G07900,AT3G42570,AT3G14720,AT1G14345,AT3G01060,AT4G33760,AT5G22340,AT4G15680,AT4G01460 QIN_4HPT/0.5HPT_UP Up-regulated in 4hPT v 0.5hPT (Table S11 PubmedID:19714218) ACA4,AT3G43550,AT3G19940,CHX9,AT2G31550,AT5G11820,AT5G39200,AT2G30310,EXPA16,AT4G26830,AT3G05770,AT5G35380,AT1G66220,AT3G26870,AT5G08480,SUC9,AT5G15560,IPT7,AT5G36720,AT5G09280,AT1G53010,AT4G08670,CIPK13,AOX1A,AT4G18070,BAG6,CHX26,AT4G21323,AT5G45650,BR6OX2,HSP17.6A,AT3G19690,AT1G60420,AT2G29500,AT2G07020,STP4,AT5G13200,AT3G24790,AT1G09720,BG5,HSP17.6II,BETAG4,AT5G26220,BGLU12,AT3G02125,AT1G59860,AT3G47800,PUB23,RABA1C,AT2G21430,ERD14,AT4G25040,HSP70B,AT3G15860,TET8,INT3,NIP4;1,TET16,HSP90.1,HSP81-2,AGP15,AT1G53540,CIPK18,AT2G30630,AT5G46780,AT1G54050,AT5G26100,AT5G20310,ROPGEF13,AGP1,AT1G29770,AT1G18280,RBK1,AT2G19440,PATL1,BGLU14,AT1G12320,AT2G37540,RBL7,AT1G02820,LSU2,AT4G02160,CXE12,PPCK2,AT1G52250,CEL3,PGP9,CHX12,AT5G02730,AT1G69840,SOUL-1,CHX3,UGE3,AT3G09540,AT4G12400,CHX4,CHX21,CXE18,UGE1,AT4G12980,AT5G51440,AT1G50740,AT5G46200,AT2G05160,BGLU15,AT5G03810,AT5G10695,AT3G56540,AT3G59460,AT4G34600,AT1G27620,AGD11,SPP2,AT2G38480,AT2G38920,AT3G10300,RHS17,HSP101,AT5G35320,ERD7,AT1G76640,AT5G02490,BPS1,AT2G01920,AT1G67670,PIPK10,WRKY34,PUP3,AT2G46600,AT1G04770,AT3G09440,AT1G42470,PROPEP3,AT1G32920,INT4,AT5G14470,CP1 QIN_4HPT/DRY_UP Up-regulated in 4hPT v Dry (Table S12 PubmedID:19714218) AT3G43550,ACA4,AT2G31550,AT3G26870,AT1G76640,BGLU12,AT3G19690,AT5G35380,PUB23,BGLU14,CHX9,AGD11,AT3G19940,BETAG4,CXE18,AT2G37540,AT2G29500,ROPGEF13,AT2G30310,BG5,PGP9,AT4G21323,AT4G12980,BAG6,AT5G11820,SUC9,AT5G39200,EXPA16,AT5G08480,AT4G26830,HSP17.6A,AT1G66220,AT1G09720,AT3G05770,AT5G36720,IPT7,AT1G74450,AT1G60420,AT4G18070,CHX26,AT5G15560,HSP90.1,AT3G24790,AT1G53010,AT2G07020,AT1G59860,AT5G09280,HSP17.6II,CHX21,AT5G10695,CIPK13,AT4G25040,AOX1A,NIP4;1,AGP15,AT3G02125,AT5G45650,AT5G26220,CEL3,AT1G29770,MBF1C,AT1G54050,AT4G08670,HSP70B,AT1G53540,AT2G21430,AT5G13200,AT3G56540,PMZ,HSP81-2,UGE3,AT4G02160,AT3G15860,AT5G02490,AT5G20310,HSP17.4,TET8,INT3,AT5G04760,AT1G67640,AGL49,BR6OX2,STP4,TET16,RABA1C,INT4,RBL7,AT5G46780,SOUL-1,CYP735A1,AT1G09575,AT1G73070,AT2G05160,AT3G47800,AT4G30490,AT3G59460,CP1,UGE1,CHX12,PATL1,CXE12,DREB2A,HSP101,AT4G12400,AT2G19440,BGLU15,AT4G34600,CIPK18,AT5G26100,AT1G32920,AT5G02730,AT1G02820,AT2G21510,PPCK2,AT5G51440,AT1G42470,AT1G27620,AT1G50740,CHX3,AT1G69840,NAC062,AGP1,PUB22,LSU2,DIC2,AT2G38480,SPP2,AT2G38920,CHX4,AT5G46200,ERD7,ERD14,AT2G30630,AT4G18950,MYB120,AT3G10300,AT3G09540,AT1G52250,AT1G12320,RBK1,AT4G33920,AT3G53230,AT2G23120,RHS17,HSP18.2,AT1G59910,AT1G18280,GATL10,AT3G46220,CT-BMY,CIPK15,AT5G61620,AT5G03810,SKIP2,AT5G41100,AT5G55400,TUB7,PERK1,TIL,PCAP1,ACS6,ELF4-L2,AT2G01920,AT1G67670,AT2G23970,AT5G26718,AT2G24460,RALFL12,AT2G46915,AT4G29780,AT1G04770,SYP122,AT2G46600,AT5G64870,FAO3,WRKY34,ABCG14,AT4G13760,PUP3,2-OCT,PIPK10,SAR1,ORP4C,AT2G37360,AT3G53650,MEE23 QIN_4HPT/DRY_DN Down-regulated in 4hPT v Dry (Table S12 PubmedID:19714218) AT1G55260,VSP1,NIT2,LTP3,AT1G13930,COR47,AT5G45950,RD20,MLP168,RD21,LP1 QIN_SIV-PT/DRY-POLLEN_UP Up-regulated in SIV PT v dry pollen (Table S13 PubmedID:19714218) ACA4,AT3G43550,AT2G31550,AT2G30310,AT1G09720,SUC9,BIP3,AT3G19940,AT5G36720,AT3G26870,AT3G27960,AT5G09280,AT1G29770,AT4G21323,BAG6,AT3G24790,PATL1,AT5G08480,CHX9,AT2G37540,AT5G39200,AT2G23970,AT4G26830,HSP90.1,AT5G49180,AT2G07020,AT4G02160,AT5G20310,CXE12,AT1G66220,AT5G15560,CXE18,IPT7,CHX3,AGP20,AT5G45650,AT4G25040,AT3G19690,PUB23,CIPK18,BGLU12,AT1G54050,AT2G29500,AT2G21430,AT4G13760,AT2G25070,AT1G63530,AT5G35380,AT1G23460,AT1G59860,HSP17.6II,STP4,AT5G11820,CYP96A10,AT4G12980,ATCHX7,AT4G18070,ROPGEF13,TET16,AT2G17000,HSP17.6A,AGP15,AT4G12400,CHX21,PGP9,CHX26,DIN2,BETAG4,HSP81-2,PDIL1-2,AT4G34600,AT3G11780,AT5G02730,AGD11,AT1G72760,AT3G05770,AT1G02820,AT5G26220,CIPK13,MBF1C,AT1G53540,AT2G19440,CHX4,AT5G38440,PHI-1,BGLU14,SKIP2,ANNAT3,RHS17,RBL7,AT1G71000,CNX1,SEC15B,AT4G08670,AT3G09540,EDA18,HSP70B,INT4,ZIP11,BR6OX2,RBK1,NIP4;1,NRAMP3,AT3G02125,AOX1A,AT5G03810,AT3G56540,AT2G24070,AT5G26718,ARR9,AT4G14290,AT3G60580,UGE3,APR2,CHX12,AT5G14470,AT3G59460,NAC062,TUB7,AT1G20650,AT1G60420,AT1G03010,WOL,TET8,AT1G18280,AT1G74990,PCAP1,AT5G66890,AT2G05160,CIPK15,AT2G45600,SUC7,AGP1,CEL3,FH4,SUC8,AT1G20550,UGE1,AT1G67670,SPP2,AT5G61140,AT5G09370,AT5G22400,PERK1,CP1,AT5G57760,AT3G46220,AT2G30500,HSP17.4,AT5G55400,AT2G25240,PPCK2,AT1G67520,RAB7B,ARL1,AT1G76640,AT2G37360,AT5G12060,AT5G26250,AT4G32350,RPL22,AT4G13800,CML37,AT2G38480,AT3G02250,AT5G62550,AT1G67640,AT2G14110,HSP101,AT1G42470,SYP122,NHX4,OBE1,HSP70,AT4G35710,CLPB3,AT2G30630,GGT1,AT3G58600,AT1G01450,BPS1,AT4G16660,AT1G59660,ERD7,AT1G04770,XPL1,AT5G13200,AT3G15860,ERO1,AT5G51440,AT1G54450,ABCG14,RPL32,PEX22,AT1G06650,SNAP33,AT3G24090,AT5G66650,AT2G01920,KCS9,AT1G56540,AT1G07860,AT1G43080,KT2,AT2G41640,MYB120,PATL2,AT1G53010,AT2G46600,AT1G62320,BGAL12,AT1G53690,AT1G27620,AT4G30500,INT3,RPS3.CHLOROPLAST,AT1G02550,PIPK10,AT5G46200,AT2G40310,XF1,DREB2A,AT1G30860,AT1G12320,AT1G18830,AT4G29520,PAPS1,AT2G21510,AT5G18500,AT4G33070,AT1G73070,GSTU23,CAD5,AT4G32070,AT1G26270,AT5G26100,RTFL8,ACS6,CRK18,BIP1,AT5G02490,AT1G70900,AT3G53650,PDIL1-1,SULTR1;2,AT4G07390,AT3G18215,CYP735A1,AT3G12920,AT2G03040,LINC2,SOUL-1,AT5G52590,AT1G30070,MYC2,CHX19,AT1G80870,ATSTE24,AT3G47320,AMY3,LSU2,RABA1C,ACLB-2,AT2G24460,MEE3,SGR2,HSFA2,AT5G35470,SDF2,BGLU15,AT1G12330,TIP,AT3G09590,SDRB,AT2G40500,WRKY34,AT1G63490,FES1A,AT4G27280,AT5G13350,ATG18C,AT4G18950,AT1G50740,AT2G24800,AT1G64380,ROF2,MTO3,AT3G06700,TCH2,AT4G34630,AT2G04230,AT5G28110,UXS3,AT3G53230,DRT101,XXT5,AT5G58620,SARA1A,AT1G48120,CYP81D8,NTMC2T2.1,AT2G45030,AT5G35370,AT5G23750,AT5G11970,PUB12,CYP704A2,UXS5,AT2G38340,CAD1,AT3G61380,AT1G20270,MATK,AT1G03220,SLAH3,AT1G23070,SRO5,LSU1,CRT1A,EXPA16,WAK3,PMZ,NLA,EXO70H1,NDHD,AT3G15430,AT5G49420,JAZ1,AT2G39900,AT3G19240,AT2G43630,AT5G10630,AT5G35735,AT2G28980,HEMG2,AT1G17430,PROT2,AT3G57070,AT1G24938,WRKY4,LAC8,CMPG1,AT1G09575,ACAT2,AT1G32920,AT5G11000,AT3G12050,AT2G26570,YCF1.1,SUVH4,AUL1,AT1G52560,AT2G05270,PROPEP3,ATBFRUCT1,AT1G35460,AT5G35320,PDIL2-3,AT2G20560,RALFL12,PSAJ,AT1G10150,AT5G08520,ALDH7B4,PAP27,LACS9,AT4G28290,AT3G24492,ROF1,AT2G25250,AT4G13130,AT1G67360,FAO3,AT1G69840,AT2G29610,NAP1;3,AT3G10300,AT1G26500,UBP5,HTA13,AT5G20300,AT5G26080,UBQ1,AT1G72800,AT4G31070,NAC102,PHS1,AT2G19970,AT4G10280,YSL7,2-OCT,ORF31,AT1G04130,ORP3B,TET7,MYB109,AT3G47800,SCAR4,AT3G09440,AT1G75610,HSI2,EXO70H4,PLP8,PGLP1,AT1G58050,ZIP12,AT2G38920,AT5G07840,HIR1,AT4G25210,AT2G03020,AT1G29060,AT1G74330,AT1G01940,AT3G60680,AT2G21385,NDHI,AT1G80670,AT3G06500,PSBI,PSBT,GAD4,AT1G28760,AT1G76700,RPS4.CHLOROPLAST,AT3G42850,HT1,AT1G26800,AT5G04760,CW14,AT3G26510,CCSA,AT5G52760,EXO70H7,AT5G23480,AT3G23750,AT3G52930,AT4G25680,AT5G41800,AT3G15980,SAR1,RAP2.12,SWN,DER1,AT1G60670,CRR21,CPK25,AT5G61620,AT3G05230,AT5G15870,AT4G23950,CRK1,ATSDI1,AT5G17680,AT5G01830,AT5G25450,PHT1;4,ATIPCS2,BG5,AT3G14075,PLAIIIA,AT4G25390,AT3G07600,AT3G24540,ARAC9,AT1G42697,ELI3-2,AT1G20800,AT4G09670,AT2G47440,AT5G66330,AT5G38160,AT4G33180,SHB1,TET4,KASI,AT4G17950,RPS8,ATATG18A,HSP81.4,AT5G53590,MPK19,AT1G30640,AT4G02920,AT5G48540,UGT74B1,AT4G29700,CNGC7,AT3G14180,GSL8,AT3G26930,AT3G60260,QC,AT1G26690,EXO70B1,PEPR1,GLCNA.1UT2,AT2G33845,COX19-2,MYB77,ATB'GAMMA,PLDP2,AT1G52250,SULTR1;3,AT2G25210,AT1G06840,AKR2,AT5G63905,AT3G26910,HSC70-1,PAP5,AT3G57880,AT4G01180,NDHE,AT1G34750,AGP22,TAP46,PPA4,AT4G33150,AT4G12010,AT1G50680,AT1G74870,SVB,AT4G13190,VATG3,SFP1,AT5G37970,AT1G63500,PEX3-1,MPB2C,AT5G11700,AT1G48860,AT2G44500,CYP71B7,AT5G51830,AT2G16040,NHL8,AT1G53460,NF-YC11,GRF8,G6PD6,AT2G17350,AT1G08050,AT4G26750,PEX14,NRPB5,TPS11,AT2G23120,AT5G07710,DPA,AT3G21650,AT5G13540,AT5G39390,EDA25,RPL20,AT5G41100,AT2G32050,AT5G49580,AT1G65760,AT5G16010,SCL8,AT1G10780,AT5G20580,SIS3,GSTU19,PDIL1-3,AT2G28820,CMPG2,TUA3,AT3G26880,AT3G48140,AGP21,AT2G44310,AGP12,MTO1,AT2G24970,RARE1,ACBP5,GSL10,AT3G23060,EIF4B2,PSBK,AT3G25600,DER2.1,AT3G22570,AT3G44050,AT1G13195,GRF2,ICK5,AT5G61810,AT5G62350,AT1G70780,NF-YB13,AMT1;4,EXO84B,AT5G19290,AT2G11480,AT5G10695,AT1G23220,AT2G32450,AT3G55940,AT1G59910,EER4,AT4G23050,RPS19,AT1G24140,PBS1,AT1G50890,AT1G53210,AT5G42150,ZIP4,BZIP19,MPK5,AT3G54770,MAP18,KEA2,PHE1,DGK1,AT4G08320,ATG8E,AT1G27610,AT1G04200,AT4G35690,TPS-CIN,JAZ12,AT4G30670,AT-HSFB2B,AT4G18300,PRT6,DIC2,AT3G09560,AT5G14970,AT5G46295,AT2G46915,DIS1,AT5G05210,AT2G32630,SIR,GSTU5,PUP3,AT5G40270,AT2G32150,ACT2,AT5G40880,AT4G13690,AT3G05220,ZIGA4,GATL10,AT1G74450,AGL91,PHB6,AT1G01100,AT4G38690,AT3G01590,PSAB,AT3G56200,HTA2,AGL94,AT1G72660,AT5G39990,APRL6,GEM,ZPR1,SAY1,AT2G40650,SHM7,AT1G17790,AT2G42760,EMB1441,AT5G26770,RABC2A,AT4G01090,AT5G64230,AT1G18470,HSFA1D,SNF7.1,AT2G39440,AT4G22820,CAM7,AT1G15860,AT3G21810,AT1G09160,UXS1,AT5G19310,SK19,GONST5,AT3G44700,AT4G27620,PUM12,AT3G50920,AT1G07820,SRC2,TPS9,AT2G20030,AT3G45800,AT5G41770,AT1G78070,CAT6,AT5G46780,AT5G59980,AT4G24830,MGT7,HSP60-3A,PSAI,AT4G33640,APX1,SMC6A,AT2G32210,AT3G01210,AT1G73430,AT3G49450,AT5G64170,PMSR1,AT3G01400,AT3G14200,AT3G46450,TIL,TPS8,SHM3,WIT1,AT5G37360,RPS7.1_CHLOROPLAST,AT5G61310,ERD2B,RPS18,AT4G31860,YCF9,KEA1,AT1G67540,BOB1,AT4G37900,AT5G04610,WRKY3,RPL16A,AT5G40690,CYCA2;1,AT1G70200,SCP2,AT1G77670,AT1G80630,AT1G50120,AT3G57490,AT3G56870,RPT1A,RABH1C,EMB2780,LTI30,AT1G04030,AT3G08020,AT3G05940,APA1,EXL4,AT2G03430,EMB1579,AT2G17972,MEMB12,AT3G27410,AT2G36300,AT5G18340,AT1G12030,AT4G31985,AT4G29780,AGC2-1,AT1G22930,SK14,RACK1B_AT,RPS12.2,AT5G44080,AT5G03080,FLA18,AT3G16010,AT1G01570,AT1G23710,RAB1C,PAP10,AT1G15300,LGT9,AT3G15180,AT1G03905,HDG3,MKK2,AT3G27570,ATPA,AT5G28380,AT2G28120,AT1G02330,DOR,RPL16.CHLOROPLAST,DRP3B,CM1,AT3G25160,AGD9,AT5G61330,AT5G27750,ALIS1,AT1G74340,AT3G60110,IRT3,CAM4,SAG18,CKX5,HSP23.6-MITO,PLDBETA1,AT4G13740,AT5G51180,AT3G47960,KCS11,AT3G25410,AT3G20510,PTR5,AT4G12790,PPC3,AT2G41830,AT5G01280,AT1G61080,AT2G27710,AT4G33080,AT1G18700,AT2G38370,LACS8,AT5G02170,AT2G31090,AT5G17190,IRE1-1,KP1,AT5G50110,AT1G05000,AT1G75920,AT3G21310,AT2G38870,AT4G22620,AT1G63100,OSB4,AT5G45550,AT1G19330,UNE5,LPD1,AT5G23540,PAP1,ATERDJ2B,CAB3,AT5G16380,AT1G13790,CYSA,AT1G28250,AT1G27830,IDH2,AT4G09340,AT1G26660,ACR5,ATPF,VFB2,AT5G63620,RPOC1,AT5G54100,AT3G51530,AT1G05150,AT3G56730,AT5G47480,MRP1,SMC5,FER3,MYB70,AT4G33920,AT3G02840,CRT1B,AT5G52790,AT3G01290,AT3G61360,AT3G57280,UGT73B5,FLS5,AT4G24900,AT3G20990,AT3G27270,AT4G10790,AT5G61220,AT1G62740,ATPH,AT1G65020,GSTL1,UTR3,LACS7,AT1G68340,AT1G10050,CKB1,FIM1,AT1G79700,PANK1,AT4G00920,AT1G03070,AT4G25670,AT5G44150,SDH1-1,AT3G07090,AT3G60380,AT4G09630,COP1,AT3G58540,VPS2.3,PGM,AT4G19140,AT2G36580,AT1G76270,AT1G06450,UGT73B2,AT3G49880,ARFD1B,AT5G15570,AT3G49490,AT3G07230,AT1G72820,AT3G13980,ATL5,SYTA,AT2G17660,C4H,AT5G63130,ATCHR12,PHB3,TKL,AT2G15860,HVT1,AT1G55460,AT2G46610,AT3G10330,ATSLY1,BRXL1,AT2G30120,AT1G68440,WRKY75,AT1G33230,AT2G32190,AT3G14800,PP2-A12,AT3G52060,MRP2,AT1G29200,AT4G29770,AT1G68410,AT5G47090,GCH,AGL49,AT4G30530,AT4G08230,GAE6,AT5G63520,AT4G37960,EEL,CLPB4,AT5G25520,HSP60,ECT8,AT1G30630,AT1G20380,AT5G64870,BZIP60,XPO1A,PLPB,AT4G17080,AT5G21100,CRK20,CCA1,AT4G28370,AT5G37440,HD2C,TOM20-3,COR27,ULP1D,AT4G30490,GBF4,AT2G40290,AT3G55960,AT1G29550,AT1G62950,HAT3.1,ARAC5,OVA9,MAPKKK6,AT2G21780,AT2G35710,AT5G25280,XLG2,PSBF,AT2G02570,AT1G69430,AT5G66980,AT1G11170,AT1G62130,AT4G03480,RPL23AA,ELF4-L2,AT5G38400,HCF164,DCL1,AT1G02305,NDHC,AT3G52660,AT1G32590,AT3G05190,TIM8,UVH1,AT5G15940,NDB4,AT4G39160,AT3G01430,JAZ10,RHL41,GPX5,AT1G16520,XTH11,ATKRS-1,SCPL29,NUDT12,AT5G10350,MTHSC70-2,AT3G02560,AT3G29170,HEXO1,ETFALPHA,AT5G39785,IPK2A,BAG4,HSP18.2,AT5G15510,CPN10,CFM3A,CKL2,AT5G54860,AT5G53820,MUR1,PKL,AT3G11880,PH1,AT4G15030,AT2G10950,AT5G11090,AT1G75860,AT5G66950,AT2G02290,UVH3,AT3G17800,CYCB1;5,AT3G14430,GGT2,UBA1,GSH1,AT5G02740,MNS3,NFS1,AT2G25740,AT3G09620,YCF10_CEMA,TOC120,AHP3,AT3G50790,AT5G51840,AT5G09995,AT5G15080,AT4G32620,AT2G26470,PETA,TPLATE,NAGS1,AT3G04640,RPA1A,HTA10,EMB93,TRFL4,AT5G25560,AT5G39570,IREG2,AT2G30000,CPK15,ATHSP22.0,GTE7,RBOHB,MYB97,AT1G65040,MKP1,NF-YB12,AT1G18610,MGT9,AT4G09150,AT2G46620,AT5G66120,TBL19,FRS10,TCH4,DGK3,AT2G43760,AT1G17340,AT3G04750,AT4G37110,LHY,SAR1B,GATA9,AT2G20140,APM1,AT4G35985,RPL2.1_CHLORO,AT1G60830,SRZ-22,AT1G10650,AT1G80450,ACHT4,AT3G11120,AT4G17360,PUB22,PMT1,AT4G35370,AT5G50310,BIM1,AT1G71840,AT4G30550,EMB1220,SUMO1,AT4G02370,AT2G39580,AT3G57990,AT4G31360,CDKB1;2,NRPB9A,OST1,RLI1,SAP10,SPPL4,MVD1,CLC-F,AK-LYS1,AT1G10320,P58IPK,AT3G13590,AT1G03910,AT3G57570,RCI3,EIF4E,AT5G19420,AT5G05090,AT5G43030,AT5G34930,AT1G03350,SHD,AT4G28670,TPX2,AT2G40250,AT1G62045,ULP1B,BS14A,AT1G26640,AT3G22220,AT1G06540,AT3G12320,AT1G03687,MEE18,AT1G80020,AT3G49080,AT2G46760,PLC9,AT4G37210,UTR2,AT1G68550,RAB7A,AT3G52640,ATS9,RABH1D,AT1G52380,EMB2271,AT1G78820,TDP1,AT1G15810,PMEI2,J2,AT3G05270,AT5G18350,GATA1,SBT3.12,ORC2,LON3,KUP10,ACLB-1,AT5G41140,DRP3A,AT5G57700,CASP,PRP39,AT4G30480,KU70,AT5G60610,AT5G64180,EMB1674,AT3G62890,AT1G06070,AT4G21730,AT1G57700,AT1G32360,BGAL4,AT2G41160,HSPRO2,AT5G55915,AT5G57850,AT1G15940,AT5G57610,AT4G00040,AT5G06420,ATG2,AT5G45620,BAP1,AT3G61770,AT5G40645,ACX2,BRCA1,AT5G53340,DEX1,AT5G11680,AT2G04480,AT4G01810,TGH QIN_SIV-PT/DRY-POLLEN_DN Down-regulated in SIV PT v dry pollen (Table S13 PubmedID:19714218) AT1G51340,AT5G58110,AT2G29790,AT2G46910,AT5G22480,EXPA8,AT4G19110,AT3G28790,WRKY45,EXO70H3,AT5G38390,AT1G04290,AT1G33050,AT4G18395,AT5G44520,UBQ3,CM3,AT1G79660,AT1G29120,AT4G35980,AT1G22730,AT2G37240,AT2G20440,ATCHX1,AT2G40620,AT4G31290,AT5G41780,AT4G09950,AT5G25340,PK1,AT1G20280,ACX4,AT5G40740,ARLA1B,AT2G07370,AT1G03960,AN,RBL1,AT3G60300,AT2G02970,AT4G20390,PPA3,AT2G01380,AT2G10630,AT3G19970,TAF8,AT1G18990,AT3G09320,SOS2,AT3G49310,AT2G45670,AT2G19000,AT2G47120,CWINV2,AT1G22800,AT5G01340,UNE17,AT3G11100,AT4G25780,AT4G17790,AFR,AT1G76570,AT1G33290,AT2G03390,AT3G50340,AT1G73530,AT4G03290,AT2G20830,DAG2,HEMA1,AT2G01480,AT1G55260,AT2G37840,AT1G50390,AT5G09820,AT5G47680,AT4G32590,CEG,JMT,LYC,PRS3,AT4G14930,AT1G03050,AT2G37480,AT2G14800,TPST,AT3G62640,AT3G23170,AT4G12430,SDIR1,AT3G27770,AT5G09510,AT5G40610,DRG1,AT5G66050,AT2G43160,AT3G16310,MHX,AT3G06780,AT3G17980,RD21,AT4G31340,AT3G56680,AT1G10610,AT4G22850,AT1G14670,AT2G46140,AT4G38480,ACS10,UAH,AT1G70420,QSOX1,AT1G37170,SRG3,AT1G32520,AT4G04980,MTN2,UTR5,AT4G02480,AIF1,SDP1-LIKE,AT4G29450,AT5G60260,MUB2,AT1G15350,AT3G59090,AT5G20460,AT1G71410,AT5G57040,STP6,AT1G76670,ELF5A-1,AT5G46140,GOS11,GAE4,AT4G20380,RPE,AT1G47980,AT3G51730,ROPGEF12,AT5G23340,AT5G65520,AT4G08240,ATRER1C1,AT3G46430,ALB3,MYB6,AT3G60040,NCED6,SS3,AT5G61360,SLP2,VDAC4,AT5G62750,AT5G15110,TIM23-1,TBL20,NAP12,AT4G00090,RPS17,AT4G33230,AT5G66290,ARF3,AT3G05165,AT5G02020,CHX27,AT5G10650,FAD3,AT5G52960,LCR72,AT1G70040,KAO2,AT4G14100,AT5G11450,AT4G20230,GPX4,AT3G24530,AT2G39570,QQS,UGP1,CYP86A8,AT1G06890,AT1G03210,AT3G05100,AT2G40475,AT1G74320,PPDK,AT1G22850,CSLC6,AT2G18030,AT3G52610,AT1G20540,AT5G20390,NRS/ER,AT1G55000,CHX14,AT1G13640,MSRB3,AT3G07870,LRRXI-23,AT4G30310,AT4G33850,AT4G27980,AT1G22650,INVH,WNK10,AT3G24120,AT3G11690,BXL1,COBL11,AT3G58670,NTRA,AT4G24630,AGL21,AT3G10100,AT5G47620,AT3G44430,AT2G48050,AT1G22200,BGAL13,ELF4-L4,AT4G16745,PDK,AT2G47020,AT4G36640,PC1,AMK2,QUA1,AT1G27930,AT4G19830,NUDT17,AT3G21570,AT2G36630,AT5G45950,ACA1,SUFE2,ATCSLA09,AT5G61710,AT1G16760,AT2G37450,FCLY,AT2G29020,AT3G09760,AT3G01620,AT4G23490,AT1G16560,AT4G12930,CSLC12,AT1G52680,AT4G14810,AT2G16980,UNE15,AT5G28010,BT2,AT1G32220,AT5G38760,AT4G33780,AT2G15240,AT2G15640,AT3G28840,AT2G26850,AT2G40400,GSTU16,HEXO3,EDA24,TDT,SHW1,TYRDC,AT5G48780,RR2,AT2G18180,AT4G08400,AT3G11740,AT1G72460,AT1G21070,AT5G57830,AT3G58510,AT3G01820,AT2G37730,LCR10,AT5G18140,LBD25,AT5G03690,AT3G20530,SIGC,AT4G30420,LCL1,PGPS2,BCAT-2,AT3G28780,AT1G22110,AT2G45610,ARRABA1H,AT4G30690,AT1G50290,AT1G72340,ACA2,AT2G28080,AT3G20200,CYP71B31,NAC105,AT3G28830,AT4G16040,AT1G68710,CXIP2,AT2G47340,AT1G51915,AT5G07420,AT2G10970,AT5G02720,MLP168,AT2G29360,TT10,BT5,VAMP726,AT2G30170,MS2,AT5G52450,AT1G54070,AT4G29735,AT4G15980,AT1G67290,AT1G12120,AT3G15630,AT3G06150,AT4G00350,AT5G39870,AT2G25790,AT3G29610,AGC1.7,AT5G43530,AT3G03080,AT2G45250,AT1G44000,AT3G06830,AT1G73630,CHX24,EXO70H5,J8,AT4G17690,AT3G28810,AT1G36105,AT3G28980,OFP18,AT5G27870,LCR17,PIRL6,AT5G27980,AT4G38330,AT2G19010,AT5G36250,AT3G10460,AT1G63060,EXPA24,AT3G28770,AT5G28470 QIN_SIV-PT/4HPT_UP Up-regulated in SIV PT v 4hPT (Table S14 PubmedID:19714218) BIP3,AT3G27960,AT1G23460,PDIL1-2,AT1G63530,CNX1,PHI-1,AT2G25070,AT2G23970,AT2G17000,AT1G03010,AT1G72760,DIN2,AGP20,AT5G49180,ATCHX7,AT1G67520,CYP96A10,WOL,SEC15B,ZIP11,PATL1,AT2G45600,AT2G25240,ARL1,AT3G60580,ANNAT3,AT1G74990,ARR9,AT2G24070,AT4G16660,SUC8,AT3G02250,CAD5,AT3G24090,RPL32,CML37,PDIL1-1,AT4G13760,AT5G26250,AT1G71000,AT1G29770,AT4G33070,AT4G29520,AT1G06650,AT2G03040,BGAL12,AT5G61140,AT5G18500,ERO1,CXE12,AT1G20650,AT3G11780,CHX3,BIP1,NRAMP3,AT3G47320,PSAJ,AT2G30310,RAB7B,AT4G32350,JAZ1,AT1G09720,AT1G18830,AT1G53690,SDF2,AT4G35710,AT5G66890,AT1G23070,SUC7,AT5G38440,PEX22,AT5G09280,AT5G36720,CRK18,MATK,AT2G05270,PROT2,SUC9,AT4G13800,AT1G43080,CIPK18,AUL1,AT4G30500,FH4,AT1G26270,SARA1A,MTO3,AT2G04230,AT5G20310,AT1G12330,AT5G23750,KCS9,AT3G57070,CRT1A,AT3G58600,RPS3.CHLOROPLAST,AT5G11970,APR2,ACLB-2,EXO70H1,LSU1,AT1G59660,AT1G54450,GGT1,AT3G24790,NHX4,AT1G20550,AT4G02160,PSBI,ATBFRUCT1,AT5G13350,AT4G27280,AT4G31070,AT3G18215,AT1G80870,RPL22,EDA18,ATSTE24,PAPS1,PEPR1,AT5G35370,ACA4,AT2G45030,AT3G06700,AT4G14290,AT5G11000,OBE1,SVB,AMY3,AT2G14110,ORF31,KT2,SKIP2,NAC102,PSAB,AT3G12920,AT5G26080,AT1G35460,PGLP1,AT2G40500,AT5G14470,WAK3,AT2G19970,AT4G32070,SDRB,AT1G62320,AT5G09370,AT1G02550,YSL7,AT2G29610,AT2G41640,AT5G57760,AT2G30500,AT1G29060,AT2G47440,RHS17,PATL2,CHX4,AT5G22400,HSP90.1,AT5G45650,XF1,ACAT2,EXO70B1,AT3G19940,AT1G01100,AT4G12400,AT1G20270,AT5G26718,AT1G56540,AT2G24800,BAG6,UBP5,AT2G28980,CAM4,AT5G02730,AT5G08480,CMPG1,AT2G07020,AT5G62350,AT3G09540,AT3G07600,AT1G07860,AT5G14970,AT4G34600,AT5G62550,AT4G21323,MYC2,SCAR4,SNAP33,AT2G32450,AT5G03810,AT5G38160,AT2G40310,GRF8,NLA,AT1G02820,MPB2C,BPS1,ZIP12,AT5G66650,AT1G70900,RBK1,HEMG2,AT5G12060,HSFA2,AT5G10630,TIP,DRT101,CRR21,AT3G61380,STP4,AT4G25040,AT5G61810,AT2G43630,AT5G28110,SULTR1;2,CLPB3,AT1G48120,AT4G34630,PLDP2,PSBK,PUB12,AT3G05220,AT1G30860,TUB7,AT4G26830,EXO70H4,AT5G39200,AT2G19440,AT5G37360,PDIL1-3,PDIL2-3,TET16,AT5G35735,AT2G21430,AT1G01450,AT1G03520,AT5G01830,SUVH4,RTFL8,AMT1;4,AT1G54050,AT5G17680,CYP704A2,SCL8,PCAP1,FES1A,PHS1,AT4G13130,KASI,RPS8,RPS4.CHLOROPLAST,AT3G15430,AT2G37360,AT5G15560,AT5G51830,SGR2,PLAIIIA,NAP1;3,AT1G67670,NTMC2T2.1,AT1G18280,NRPB5,CIPK15,AT1G26500,AT1G17430,HSP70,AT2G11480,AT2G21385,AT3G15980,QC,AT3G24492,PAP27,PERK1,AT4G12010,ATG18C,GSTU5,HSP60-3A,AT2G33845,MED8,CHX19,CRK1,AT4G17950,NDHD,DER2.1,PUM12,AT1G26690,AT1G58050,AT5G55400,SYP122,AT3G46220,AT3G23060,TET4,AT1G28250,AT4G29700,AT3G50920,RARE1,AT1G72800,AT5G20580,AT4G13690,AT4G31985,EXO70H7,AGP12,DER1,PFL,EMB1441,UNE5,AT4G13740,ACBP5,AT1G42697,AT4G25670,EEL,AT1G09160,IPT7,PEX3-1,NAC062,XPL1,AT3G24540,HSC70-1,AT1G07820,LINC2,GLCNA.1UT2,JAZ12,AT1G63490,AT3G25410,AT5G41800,AT1G66220,AT4G35690,AT3G05230,AT2G28820,LTP3,MPK5,AT3G13980,AT5G35470,SHM3,PAP5,AT1G28760,CRT1B,AT5G63905,KEA2,SHD,AT2G31550,AT1G60670,AT3G14180,AT1G08050,ATIPCS2,AT1G20800,NDHI,SWN,PMSR1,RPS19,RBL7,ROF1,AT1G76700,AT4G24830,SHB1,AT2G37540,AT1G04770,MRP2,SPP2,HSI2,AT2G42760,PMEI2,AGP1,ELI3-2,KCS11,AT1G03220,AT4G25210,AT5G13540,ABCG14,HSP81-2,UTR3,UGT74B1,GSTU23,AT4G23050,AT4G25390,AT4G25680,BZIP19,HCF164,AT5G61310,ATSDI1,AT3G54510,TCH2,AT2G20030,AT2G35710,HSP17.6II,MEE3,ATCHR12,TUA3,AT3G52930,EDA25,AT3G21810,HA9,AT1G80630,AT4G07390,AT4G30670,CHX12,AT4G37900,LTI30,AGP15,ULP1D,AT1G63100,MTO1,AT1G48860,AT5G52590,AT5G66330,AT2G26570,VATG3,AT3G60680,ICK5,AT3G54770,ARAC9,SULTR1;3,AT5G52760,DIS1,AT4G17080,GEM,AT3G06500,UXS5,AT3G59460,EXL4,PRT6,AT1G34750,NF-YC11,AT5G15570,AT5G21100,AT5G39390,HSP23.6-MITO,MKK2,AT3G57880,AT2G43760,AT5G03080,SIS3,INT4,APRL6,CAD1,BS14A,CHX9,AT3G01210,AT2G36580,AT5G07710,AT2G46600,AT5G48540,AT1G74870,AT3G06620,AT1G32590,AT5G64170,GCH,AT2G32190,AT5G08520,CLPB4,AT2G32210,AT5G39570,AT1G23220,AT3G56870,UXS3,AT5G15870,PIPK10,AT4G11030,BR6OX2,DRP3B,AT1G30070,AT5G23540,ALIS1,AT-HSFB2B,RPT1A,LP1,AT1G53540,AT4G19140,AT2G38480,AT1G68440,ZIP4,AT3G49880,DPA,AT3G26930,BIM1,AT1G22930,AT2G10950,AT4G18300,AT2G30630,AT2G01920,AT4G02920,IDH2,PHE1,PLPB,APM1,AT2G32050,AT1G52380,PH1,AT3G45030,AT1G18470,ZPR1,G6PD6,AT2G17880,AT1G16520,AT2G27710,YCF9,YCF1.1,AT3G25160,PPCK2,AT1G41880,AT2G32630,EER4,NDHC,ATPA,AT5G20300,AT1G77670,AT1G50680,PHT1;4,ATSLY1,MRP1,AT5G04610,AT2G36300,AT2G24970,AT5G26220,EMB2780,RAP2.12,AT1G73430,AT1G27830,SFP1,HSP81.4,ZIGA4,AT1G74340,ALDH7B4,AT3G26510,AT2G17350,RACK1B_AT,AT1G65760,ARAC5,AT3G48140,AKR2,AT4G28290,AT3G09590,AT5G25400,RPA1A,CKX5,CHX21,COP1,AT3G60110,AT5G27750,AT5G05210,MYB77,EXLA1,AT4G23950,AT2G31090,PPC3,AT3G27570,ACR5,AT1G67540,AT3G45800,UGE1,AT2G04480,AT5G61330,AT1G21900,AT5G53820,AT5G64230,AT5G16380,HTA2,LAC8,AT5G58620,AT1G76270,ERD7,RABC2A,AT3G53650,AT4G33150,XXT5,AT2G03020,AT1G75920,AT1G24938,AT2G20560,AT3G51990,UXS1,AT3G61340,TPS11,AT5G44150,SNF7.1,CYP71B7,CP1,AT5G49580,AT2G05160,WRKY3,RPOC1,AT1G42470,AT3G07230,AT3G22570,AT1G26800,AT3G43550,CIPK13,PEX14,EXO84B,AT3G61360,AT3G11120,AT1G80670,CKB1,AT3G21310,AT3G60380,LACS9,AT5G26770,DRP3A,CCSA,AT1G01940,NRPB9A,AT1G01630,AT4G31860,CCA1,HT1,AT5G49420,TPS8,AT2G38340,AT3G58540,CRK20,EIF4E,PLP8,AT3G05270,CPK25,GPX2,MYB120,VPS2.3,AT5G38400,AT1G74330,AT1G10150,MYB50,AT5G34930,GONST5,AT3G56200,AT3G46450,AT1G18610,AT1G71680,CYP81D8,JAZ6,AT1G19330,AT1G18700,SIR,CM1,IRT3,AGP22,AT5G37970,RPL16.CHLOROPLAST,AT1G74250,AT1G30630,AT1G70780,UGT73B5,AT2G39900,ACHT4,AT4G33640,AT1G64380,AT1G23710,DGK1,AT2G02060,PTB1,SK2,AT4G08670,AT2G46610,AT3G57490,TET7,TAP46,AT3G26870,AT1G76920,AT5G52790,ATERDJ2B,AT4G28370,AT1G05150,GSL8,FRS10,AT3G42850,AT3G23660,AT3G47960,ATG8E,PETG,HSP70B,AGL91,CAB3,AT1G04130,AT1G79700,RPS18,DOR,BRXL1,LGT9,AT1G05000,WRKY75,WEE1,PAC1,AT5G51180,SNX2A,ACS6,SKS17,AT2G44500,AT4G18070,HVT1,AT3G14430,SLAH3,AT4G02370,AT3G52640,AT3G49490,DS2,CXE18,AT2G39350,GSTU19,AT1G52560,AT1G33230,AT3G15180,ACT2,AT5G29000,TRFL4,AT1G80020,AT3G09560,AT5G47480,AT3G17800,MNS3,AT3G09180,AT3G01400,AT1G12320,TET8,AT1G11170,AK-LYS1,NDB4,SMC5,AT5G42050,PRORP2,NF-YB13,AT3G19240,FUS12,AT5G11700,APX1,AT3G01590,RHS15,AT1G61780,AT5G44320,RPL16.MITOCHONDRIA,ARFD1B,C4H,GSL10,AT1G03905,HEXO1,AT4G22620,AT5G39990,AT1G03350,AT3G56540,AT5G63620,AT5G01280,AT3G09620,AT4G14530,AT3G09680,AT1G62130,EDA36,HAT3.1,AT3G50780,AT2G40650,COX19-2,PRP40C,AT5G51440,AT3G04750,ATG2,AT4G01180,AT1G10780,PETA,RPL16A,CHX26,AT1G22410,AT1G67360,AT5G53590,ERD2B,MKK4,AT3G18740,AT1G04200,AT3G04605,AT4G08320,LOS4,AT5G46200,AT1G68410,BAP1,AT2G20140,LHY,AT5G09995,UPL7,RPL27AB,UGE3,PBS1,CAM7,AT3G23750,AT1G72960,AT5G64180,AT1G04030,CAT6,WRKY34,HDG3,UBP26,AT2G24460,WRKY4,AT1G62950,GRX4,SDH1-1,5PTASE13,AT3G22220,AT3G05940,XTH11,AT2G26630,RPL23AA,PMT1,AT5G15080,AT1G50120,CLC-F,AGP21,CNGC7,TKL,AT5G43030,AT3G61240,AT5G40880,AT1G06840,AT3G02125,AT3G05190,AT3G55960,AT4G17360,AT5G61920,PROPEP3,BZIP60,AT1G20380,AT5G01660,AT1G26280,AT2G21780,AT1G49740,AT1G65020,AT4G03480,AT1G12030,AT3G53890,AT2G02290,NIP4;1,PBRP,AT3G57570,YCF10_CEMA,AT1G03687,AT5G45550,AT1G70200,HA6,PSBM,AT3G14800,XPO1A,RAB1C,CYCA2;1,YSL2,ATB'GAMMA,RABH1C,AHP3,EMB2171,AT1G67930,AT2G43190,SAR1B,BOB1,ATATG18A,AT1G10320,AT2G25210,ATCHX13,LHT2,AT5G61170,AT1G55460,NAGS1,ERD15,AT4G01090,EMB93,AT4G10790,ETFALPHA,FIB,SAY1,AGL94,AOX1A,LACS8,PSP,AT2G25250,LON3,AT1G75610,AT1G26640,COX10,AT3G55940,AT2G30020,AT3G21650,AT4G31360,AT1G72820,CKL2,AT3G08630,MEE18,AT5G02170,FIM1,AT4G09340,AT5G19290,MAP18,MRH2,AT4G22960,AT4G08230,XLG2,AT5G66980,AT5G25450,MYB109,EMB2271,RHM1,AT4G01810,AT5G40690 QIN_SIV-PT/4HPT_DN Down-regulated in SIV PT v 4hPT (Table S14 PubmedID:19714218) LYC,AT4G20230,AT4G12430,RPE,AT3G07870,GOS11,AT4G19830,AT5G10650,GAE4,AT3G62640,EXO70G2,AT3G23170,AT2G46140,CWINV2,AT1G22800,AT4G22850,AT5G58110,AT2G47020,MTN2,AT2G02970,CYCA3;3,AT5G02020,AT1G24050,CHX27,AT2G15720,AT3G56680,AT5G25340,LBD25,AT1G35490,AT3G17980,DRG1,AT1G27930,AT4G25780,AT3G16310,WNK10,AT2G15640,CHX14,AT5G20460,UBQ3,UGP1,QQS,AT1G32520,NUDT17,VDAC4,ARLA1B,AT4G31290,AT2G48050,NTRA,MHX,AT4G33780,QSOX1,AT1G22850,AT1G55000,LRRXI-23,AT2G18030,ELF5A-1,AT1G13640,AT5G15110,AT3G21570,AT1G51915,AT4G04980,LCR72,AT3G52610,AT1G71410,AT2G36630,AT2G40400,AT4G20380,AT1G16760,PDK,AT1G20540,JMT,AT1G76670,TIM23-1,MUB2,INVH,GSTU16,MSRB3,AT2G15240,AT1G70040,AT5G61360,AT3G09760,AT3G24530,AT3G46430,AT2G16980,AT4G00090,AT5G66290,AT4G38480,AT2G29020,RPS17,AT4G16745,CSLC6,ELF4-L4,AGL21,AT3G11690,NRS/ER,NCED6,AT5G62750,AT4G24630,AN,AT1G16560,AT4G30310,AT3G01620,AT3G24120,STP6,AT4G27980,AT1G74320,AT4G33230,AT1G06890,PPDK,AT1G15350,AT3G44430,SS3,HEXO3,AT2G39570,AT5G65520,FAD3,AT5G57040,BGAL13,AT5G47620,AT3G58670,QUA1,RR2,AT2G45610,KAO2,AT1G22200,ATCSLA09,AT5G61710,SHW1,AT3G28780,PC1,AT4G23490,AT1G32220,AT3G28840,AT1G03210,PGPS2,COBL11,TYRDC,AT1G21070,AT5G48780,SIGC,AT1G50290,AMK2,BCAT-2,AT1G52680,ACA1,AT3G58510,AT5G20390,SUFE2,TDT,AT5G03690,AT2G37450,CSLC12,AT4G30420,AT5G28010,AT5G38760,EDA24,UNE15,AT2G18180,AT3G20530,FCLY,NAC105,AT3G29610,AT4G16040,AT1G72460,AT2G29360,BT5,AT2G26850,AT5G18140,AT5G57830,AT2G37730,AT1G68710,AT3G20200,LCL1,AT2G10970,AT1G22110,ACA2,AT3G11740,VAMP726,AT3G01820,LCR10,CXIP2,AT4G14810,AT2G28080,AT5G02720,ARRABA1H,AT4G36640,AT4G30690,AT4G08400,MS2,AT5G52450,AT3G28830,AT1G72340,AGC1.7,AT5G39870,AT2G30170,AT4G29735,AT4G15980,AT5G07420,AT2G45250,AT1G54070,BT2,TT10,AT2G47340,AT4G12930,AT4G00350,AT3G15630,AT4G17690,OFP18,AT3G03080,AT1G12120,EXO70H5,PIRL6,AT1G67290,CHX24,AT1G73630,AT3G06150,AT3G06830,AT2G25790,AT1G44000,AT4G38330,AT5G43530,AT3G28810,LCR17,AT5G36250,AT3G28980,J8,AT5G27980,AT1G36105,AT2G19010,AT5G27870,AT3G10460,AT3G28770,AT1G63060,EXPA24,AT5G28470 QIN_0.5HPT/DRY-POLLEN_UP Up-regulated in 0.5hPT v dry pollen (Table S10 PubmedID:19714218) AT1G76640,AT5G04760,AT1G74450,AGD11,CXE18,BGLU14,PUB22,AT4G30490,AT4G12980,AT2G37540,AGL49,PMZ,PGP9,ROPGEF13,BGLU12 QIN_0.5HPT/DRY-POLLEN_DN Down-regulated in 0.5hPT v dry pollen (Table S10 PubmedID:19714218) RD21,LP1,MLP168,AT5G45950,RD20,CYP71B31,VSP1,PIP2;8 DUVAL_6H_2muMTA-TREATMENT_UP Up-regulated at least 2-fold at 6 h of 2 ?M TA treatment (p-value < 0.05) (Table S2 PubmedID:19198845) AT2G41640,AT2G45400,AT2G47550,AT2G47520,AT3G29970,AT4G14130,AT4G15530,AT5G04340,AT1G73500,AT1G44130,AT1G35140,AT1G32170,AT1G58420,AT1G57990,AT5G13080,AT5G10695,AT5G20230,AT4G36670,AT4G36500,AT5G16830,AT1G50740,AT5G25930,AT5G66985,AT5G64870,AT5G62520,AT5G61900,AT5G61620,AT5G61600,AT5G59820,AT5G57560,AT5G57220,AT5G54490,AT5G53250,AT5G51190,AT5G49450,AT5G47910,AT5G47220,AT5G47230,AT5G47070,AT5G45340,AT5G45280,AT5G44350,AT5G43520,AT5G42650,AT5G42200,AT5G41800,AT5G39670,AT5G39580,AT5G39320,AT5G38700,AT5G24430,AT5G24590,AT5G19110,AT5G13200,AT5G13190,AT5G12030,AT5G10380,AT5G10430,AT5G10040,AT5G06720,AT5G06320,AT5G06730,AT5G03720,AT3G62260,AT3G61640,AT3G61190,AT3G60420,AT3G59350,AT3G57450,AT3G55980,AT3G55840,AT3G54810,AT3G53260,AT3G52800,AT3G52450,AT3G51680,AT3G50950,AT3G50930,AT3G49220,AT3G47780,AT3G46600,AT3G45960,AT3G45970,AT3G45640,AT3G44735,AT3G44720,AT3G44260,AT4G39840,AT4G39675,AT4G38410,AT4G38420,AT4G38400,AT4G37370,AT4G37450,AT4G36010,AT4G36040,AT4G35480,AT4G35770,AT4G35110,AT4G34050,AT4G34150,AT4G33560,AT4G31500,AT4G30290,AT4G30280,AT4G30430,AT4G29780,AT4G30270,AT4G28140,AT4G27652,AT4G27450,AT4G27280,AT4G26890,AT4G26200,AT4G25810,AT4G24570,AT4G24110,AT4G22470,AT4G22710,AT4G20860,AT4G18950,AT4G12720,AT4G11510,AT4G11280,AT4G08770,AT4G08040,AT4G02380,AT4G02330,AT4G02170,AT4G01010,AT4G01026,AT1G19940,AT1G19180,AT1G51620,AT1G51680,AT1G35910,AT1G76890,AT3G10980,AT1G66180,AT3G28210,AT3G28340,AT3G25600,AT3G16860,AT3G13790,AT3G19580,AT3G02800,AT3G25780,AT3G18690,AT3G23250,AT3G23170,AT3G25900,AT3G24500,AT3G26830,AT3G15370,AT3G15450,AT3G16720,AT3G08720,AT3G06420,AT3G10040,AT3G01290,AT1G13340,AT1G01480,AT1G20450,AT1G20520,AT1G77640,AT1G76650,AT1G30040,AT1G68840,AT1G52890,AT1G63840,AT1G72520,AT1G69840,AT1G69930,AT1G72430,AT1G19530,AT1G17620,AT1G15010,AT1G21910,AT1G17380,AT1G01360,AT1G32920,AT1G20070,AT1G18740,AT1G21100,AT1G28370,AT1G14480,AT1G71697,AT1G33055,AT1G27730,AT1G80840,AT1G80820,AT1G80920,AT1G64640,AT1G33760,AT1G56060,AT1G64160,AT1G72900,AT1G72940,AT1G31290,AT1G14870,AT1G59860,AT2G16060,AT1G30720,AT2G40140,AT2G31880,AT2G46400,AT2G24600,AT2G36220,AT2G35930,AT2G35860,AT2G22500,AT2G22470,AT1G61820,AT1G61890,AT1G70410,AT1G70370,AT1G05340,AT1G08930,AT1G61340,AT2G17850,AT1G76930,AT1G03870,AT2G43000,AT2G16660,AT2G46600,AT2G20145,AT2G27500,AT2G32210,AT2G32190,AT2G32030,AT2G01300,AT2G19620,AT2G05940,AT2G45080,AT2G38870,AT2G39110,AT2G47730,AT2G35290,AT2G19800,AT2G02930,AT2G22880,AT2G44790,AT2G34390,AT2G38470,AT2G38360,AT2G41100,AT2G30930,AT2G23120,AT2G23810,AT2G40000,AT2G44500,AT2G34930,AT2G30490,AT2G30500,AT2G39650 DUVAL_6H_100NM-IXB-TREATMENT_UP Up-regulated at least 1.5-fold at 6 h of 100 nM IXB treatment (p-value < 0.05) (Table S3 PubmedID:19198845) AT4G38420,AT4G30280,AT1G33760,AT4G27280,AT2G38470,AT5G53250,AT4G25810,AT2G47550,AT5G39580,AT2G41100,AT4G02330,AT2G22470,AT4G02380,AT4G37450,AT3G15370,AT5G57560,AT3G50930,AT2G32190,AT1G19940,AT4G02170,AT3G25780,AT1G35140,AT3G46230,AT1G21910,AT4G38400,AT5G45340,AT4G30430,AT3G61190,AT3G45960,AT5G10380,AT2G32030,AT1G14870,AT2G19800,AT2G29500,AT2G32210,AT4G27652,AT3G55980,AT5G59820,AT5G54490,AT2G30930,AT1G72430,AT2G39110,AT2G35290,AT4G11510,AT4G30290,AT1G77640,AT1G05340,AT2G27500,AT5G38700,AT1G66180,AT1G03870,AT3G45970,AT1G51680,AT3G23250,AT3G49220,AT1G53540,AT4G30270,AT4G22470,AT5G06730,AT1G17620,AT4G24570,AT4G36500,AT1G44130,AT5G12020,AT1G19610,AT2G01300,AT1G68840,AT1G61820,AT3G01290,AT5G06720,AT1G27730,AT5G13080,AT5G49450,AT5G20230,AT4G20860,AT1G21100,AT1G76690,AT2G46400,AT5G25930,AT4G29780,AT5G13190,AT2G20145,AT3G57450,AT3G29970,AT2G30500,AT3G54810,AT2G35860,AT2G05940,AT4G11280,AT3G08720,AT1G80820,AT2G23810,AT4G35110,AT3G25900,AT1G76650,AT1G20450,AT4G14130,AT1G20520,AT4G39675,AT1G30040,AT1G69840,AT1G32920,AT2G22880,AT1G01360,AT5G12030,AT3G26830,AT2G46600,AT4G15530,AT2G24600,AT5G47220,AT1G76890,AT3G44260,AT1G73500,AT1G32170,AT2G45080,AT2G45400,AT3G13790,AT3G44720,AT4G08040,AT1G61340,AT4G12720,AT1G08930,AT1G19180,AT3G50950,AT2G41640,AT3G28340,AT4G22710,AT2G34930,AT1G20070,AT2G35930,AT1G07135,AT3G60420,AT5G10430,AT3G25600,AT1G72520,AT5G06320,AT1G52890,AT1G24170,AT5G41800,AT4G08770,AT2G38360,AT1G61890,AT3G59350,AT5G45280,AT5G20250,AT2G44500,AT5G39670,AT5G37540,AT1G70410,AT1G35910,AT4G26890,AT3G55840,AT1G71697,AT3G52400,AT5G13180,AT1G44830,AT2G02930,AT3G17690,AT3G23170,AT4G39840,AT1G66160,AT1G61810,AT5G22250,AT1G69430,AT4G20830,AT4G26200,AT1G70140,AT1G31290,AT3G19680,AT4G19120,AT1G51270,AT4G24110,AT1G69930,AT1G57990,AT5G61620,AT5G47070,AT3G53260,AT3G44735,AT1G63840,AT3G16860,AT1G23030,AT3G02140,AT4G36670,AT3G47780,AT1G01480,AT2G19620,AT3G30775,AT5G59720,AT5G47910,AT2G29995,AT1G09390,AT5G24430,AT1G51620,AT5G44130,AT3G61640,AT1G70370,AT1G26730,AT5G47230,AT1G23480,AT5G03720,AT5G43520,AT5G55050,AT3G15450,AT5G56100,AT1G58420,AT5G64410,AT4G10920,AT5G61600,AT3G50060,AT2G27080,AT5G53370,AT1G76600,AT2G39650,AT4G37370,AT5G42200,AT2G12400,AT5G17650,AT2G40000,AT2G22500,AT3G55950,AT3G28180,AT4G01026,AT4G34150,AT4G33985,AT5G17350,AT5G04760,AT3G02800,AT4G11650,AT3G15353,AT1G14480,AT2G39210,AT3G11700,AT4G35480,AT4G32800,AT2G38870,AT2G39350,AT1G64640,AT3G23730,AT5G49520,AT5G48930,AT5G67210,AT5G10695,AT5G57220,AT1G50040,AT3G53150,AT1G13340,AT1G47655,AT4G24050,AT4G21390,AT1G68690,AT1G33260,AT3G15630,AT1G12240,AT3G19930,AT5G51190,AT5G61440,AT5G03520,AT2G39400,AT5G61900,AT2G32020,AT3G18830,AT5G15950,AT4G09570,AT5G38710,AT1G02310,AT5G08350,AT1G22190,AT5G04340,AT4G11360,AT5G37260,AT4G36010,AT3G04640 DUVAL_TA_NOT-IXB_UP Down-regulated at least 1.5-fold at 6 h of 100 nM IXB treatment (p-value < 0.05) (Table S3 PubmedID:19198845) AT5G17340,AT5G43810,AT5G12970,AT1G76790,AT2G04850 DUVAL_6H_100NM-IXB-TREATMENT_DN Specifically up-regulated by TA (at least 2-FC after 6 h, p-value < 0.05) but not by IXB. (Table S4 PubmedID:19198845) AT1G76930,AT5G39320,AT4G01010,AT4G18950,AT2G31880,AT3G18690,AT3G45640,AT3G62260,AT4G28140,AT2G47520,AT1G28370,AT3G24500,AT3G28210,AT3G46600,AT3G10040,AT2G40140,AT5G24590,AT1G80840,AT3G52800,AT3G19580,AT3G06420,AT1G72900,AT1G72940,AT1G64160,AT5G19110,AT2G47730,AT1G59860,AT2G16060,AT4G38410,AT5G62520,AT4G35770,AT3G10980,AT2G17850,AT3G52450,AT5G42650,AT4G34050,AT2G30490,AT4G31500,AT2G34390,AT5G16830,AT3G16720,AT4G36040,AT1G80920,AT5G44350,AT1G30720,AT5G13200,AT1G17380,AT2G16660,AT3G51680,AT2G44790,AT1G15010,AT1G18740,AT1G19530,AT1G33055,AT1G50740,AT1G56060,AT2G23120,AT2G36220,AT4G27450,AT4G33560,AT5G10040,AT5G64870,AT5G66985 DUVAL_IXB_NOT-TA_UP Specifically upregulated by IXB (at least 1.5-FC after 6 h, p-value< 0.05) but not by TA (Table S5 PubmedID:19198845) AT1G23480,AT3G28180,AT5G44130,AT3G11700,AT1G24170,AT1G02310,AT1G61810,AT5G53370,AT3G23730,AT3G17690,AT4G09570,AT1G33260,AT3G55950,AT4G21390,AT1G68690,AT1G22190,AT5G13180,AT5G22250,AT1G47655,AT4G32800,AT1G44830,AT5G04760,AT3G50060,AT5G37260,AT4G10920,AT5G49520,AT1G23030,AT5G37540,AT5G08350,AT5G03520,AT2G27080,AT3G46230,AT2G29500,AT1G53540,AT5G12020,AT5G59720,AT4G11650,AT1G19610,AT3G30775,AT5G38710,AT3G52400,AT5G61440,AT1G66160,AT5G15950,AT1G12240,AT1G76690,AT3G53150,AT2G39350,AT5G48930,AT5G64410,AT3G18830,AT3G19930,AT3G02140,AT5G20250,AT4G19120,AT1G26730,AT4G20830,AT2G32020,AT5G55050,AT1G09390,AT5G17650,AT1G07135,AT3G04640,AT5G56100,AT1G70140,AT2G39400,AT3G15353,AT2G39210,AT5G67210,AT4G11360,AT4G24050,AT1G51270,AT1G50040,AT1G69430,AT1G76600,AT2G12400,AT2G29995,AT3G15630,AT3G19680,AT4G33985,AT5G17350 DUVAL_IXB_NOT-TA_DN Downregulated by IXB (at least 1.5-FC after 6 h, p-value< 0.05) but not by TA (Table S5 PubmedID:19198845) AT1G76790,AT2G04850,AT5G12970,AT5G17340,AT5G43810 MARCHIVE_3H_PNP+P-WT+P_UP Up-regulated by pnp1-1 +P vs WT +P in three hours (Table S3 PubmedID:19710229) AT3G15720,rps16,AT1G77760,AT1G62480,AT2G47270,AT3G15620,AT1G47210,AT3G16620,AT4G39780,ycf9,AT1G18270,rpl20,AT5G59440,AT5G65010,psbC,AT5G52250,AT4G37490,AT5G40450,psbD,AT5G14180,AT3G53140,AT1G14210,AT4G21070,AT1G17960,AT3G57520,rps18,AT2G39570,AT2G32280,AT5G61910,petG,AT2G16780,AT5G14530,AT4G27590,AT5G24850,AT1G22500,AT1G09420,AT1G55810,AT1G35580,AT1G13300,AT4G35050,AT3G03060,AT3G49320,AT5G60040,AT5G27920,AT5G18840,AT5G58150,AT2G41340,AT1G13710,AT2G37690,AT5G05640,AT5G01040,AT1G15810,AT3G27640,AT2G03070,AT3G28500,AT5G59960,AT2G17440,AT3G03040,AT2G17740,AT1G10070,AT1G63350,AT1G09300,AT3G14180,AT2G26980,AT5G05680,AT1G77380,AT1G33790,AT1G65560,AT3G59930,AT5G56090,AT2G19800,rbcL,AT1G68440,AT5G53920,AT5G20520,AT3G30775,AT1G78050,AT3G21600,AT1G36180,AT5G63760,AT5G37500,AT5G38780,AT4G15230,AT4G08290,AT4G05110,AT1G21650,AT5G26860,AT5G41080,AT2G33050,AT5G11410,AT2G25590,AT5G58570,AT5G02100,AT3G19100,AT3G02140,AT1G15750,AT4G19380,AT5G23530,AT5G63600,AT1G07390,AT1G49240,AT5G26270,AT5G07830,AT3G16170,AT2G19970,AT1G19600,AT2G33210,AT4G29900,AT1G23010,AT1G03030,AT4G25710,AT4G36380,AT5G11260,ndhB.1,AT1G34180,AT4G15640,AT1G69210,AT1G62810,AT5G64060,AT5G37570,AT5G65110,AT3G24000,AT4G15910,AT1G15380,AT1G24260,AT3G48990,AT4G38210,AT3G61630,AT2G21640,AT5G01970,AT2G23560,petD,AT4G18300,AT3G27620,AT2G30360,AT5G11460,AT5G47560,AT5G61760,AT1G50400,AT1G24090,AT4G31810,AT3G52390,AT4G17070,AT4G15530,AT1G80460,AT4G29950,AT5G03730,AT1G07610,AT5G01340,AT1G75760,AT5G47810,AT2G26650,AT3G61530,AT2G03240,AT2G17290,AT3G55110,AT1G24180,AT5G26280,AT1G24530,AT3G57600,AT2G40940,AT5G59090,AT3G12770,AT2G47680,AT4G34860,AT1G33265,AT4G29140,AT5G25770,AT5G02480,AT3G22200,AT4G02380,AT3G53880,AT2G20800,AT5G66440,AT4G01720,AT1G62730,AT4G16110,AT1G05340,AT1G62660,AT5G17780,AT4G18170,AT3G14360,AT5G18400,AT3G14230,AT1G69310,AT2G26300,AT3G16460,AT5G62530,AT1G20390,AT3G02150,AT1G08630,AT5G65210,AT1G28580,AT5G54170,AT1G54340,AT1G76160,AT1G30270,AT3G52450,AT5G24430,AT2G16570,AT5G20230,AT4G30190,AT1G29980,AT5G64570,AT2G03760,AT1G13330,AT5G56350,AT4G11890,AT5G55200,AT3G06810,AT1G74030,AT4G33150,AT5G25440,AT1G67470,AT3G16390,AT4G23680,AT4G26910,AT2G45290,AT4G15260,AT2G37060,AT2G18600,AT4G03320,AT5G27610,AT5G13420,AT2G37130,AT5G07100,AT2G23330,AT2G36080,AT3G22460,AT1G19610,AT5G65750,AT1G35190,AT1G45616,AT1G52100,AT3G14610,AT1G50420,AT4G02390,AT5G43330,AT2G33710,AT1G23090,AT4G05390,AT5G24280,AT4G34710,AT3G19270,AT3G46930,AT1G33560,AT3G22120,AT2G39660,AT1G22360,AT3G51860,AT5G10300,AT5G07440,AT5G66650,AT5G60250,AT5G64260,AT5G14920,AT4G22960,AT3G50480,AT1G15040,AT5G48720,AT1G80160,AT5G19550,AT1G44800,AT3G17240,AT4G23480,AT4G11350,AT1G30160,AT1G26930,AT1G52760,AT3G16770,AT1G05710,AT4G12130,AT2G38530,AT3G17810,AT1G20350,AT3G02240,AT5G27520,AT3G16430,AT4G37530,AT1G27980,AT4G16250,AT4G16760,AT1G66160,AT3G15500,AT4G12490,AT1G04990,AT1G66620,AT2G36950,AT5G11520,AT3G20100,AT1G59960,AT2G34300,AT4G15093,AT5G14780,AT4G01410,AT1G07000,AT4G30270,AT1G15670,AT5G40760,AT4G17500,AT3G25730,AT3G50770,AT1G08940,AT3G49620,AT4G33420,AT5G58350,AT2G17720,AT3G23560,AT4G21120,AT4G20860,AT5G18310,AT1G22900,AT1G23550,AT4G28390,AT1G75170,AT1G32870,AT3G62150,AT2G24100,AT5G46330,AT3G14990,AT4G12480,AT3G15950,AT2G02390,AT5G27600,AT5G25900,AT5G39580,AT4G25640,AT1G72830,AT5G39520,AT5G20960,AT2G30490,AT5G63970,AT3G10450,AT4G15610,AT5G64110,AT5G13330,AT5G03700,AT5G03610,AT5G44810,AT1G72680,AT1G52200,AT1G51780,AT2G25000,AT1G66760,AT1G28390,AT1G01010,AT5G13110,AT1G62500,AT5G23850,AT5G09440,AT2G16060,AT5G40780,AT3G23550,AT1G29330,AT3G16450,AT2G45210,AT3G05360,AT3G26210,AT3G04070,AT2G31390,AT5G49520,AT2G34070,AT2G02930,AT5G17760,AT4G20110,AT4G33050,AT2G19570,AT5G09570,AT4G19810,AT5G43370,AT2G36970,AT3G12500,AT2G44450,AT4G11650,AT1G17860,AT4G34200,AT3G27190,AT4G25900,AT3G22850,AT1G74020,AT5G20400,AT4G12080,AT4G19880,AT4G23700,AT2G41380,AT5G06860,AT5G21105,AT4G16260,AT3G22160,AT3G05690,AT5G40690,AT5G39050,AT3G04720,AT3G44720,AT1G72070,AT1G55020,AT3G53480,AT3G51430,AT5G17330,AT1G72900,AT4G01700,AT3G27220,AT3G09270,AT4G10380,AT3G49120,AT2G23680,AT1G65690,AT3G16530,AT3G26690,AT4G01430,AT2G37040,AT1G69930,AT1G02930,AT5G36220,AT1G74790,AT2G18690,AT1G30700,AT2G38870,AT4G22530,AT1G05000,AT1G73260,AT5G49280,AT4G01870,AT2G30550,AT2G23150,AT5G38530,AT1G65610,AT3G21230,AT3G57760,AT2G30140,AT5G16970,AT3G21770,AT4G08770,AT5G67080,AT5G17380,AT2G41730,AT5G44380,AT2G36770,AT1G63720,AT3G46660,AT5G13490,AT1G09560,AT5G64120,AT5G12170,AT2G45220,AT1G26420,AT3G13790,AT4G24110,AT4G30280,AT1G60730,AT2G29460,AT5G19440,AT1G06180,AT3G61190,AT3G44320,AT3G04000,AT1G22400,AT1G57630,AT3G25610,AT3G11340,AT5G64100,AT2G04040,AT1G43910,AT5G37740,AT2G39710,AT1G69870,AT2G15490,AT5G46050,AT3G61990,AT3G16340,AT4G20460,AT5G42830,AT3G09260,AT1G07090,AT2G04050,AT1G12200,AT1G14870,AT1G32940,AT5G15120,AT5G43580,AT5G50760,AT2G28400,AT2G47000,AT4G32650,AT4G12470,AT1G17020,AT1G62300,AT5G25260,AT4G36990,AT2G22470,AT3G20660,AT4G13660,AT5G13080,AT1G33030,AT2G39350,AT2G22880,AT5G17860,AT3G26830,AT5G12160,AT1G23800,AT3G20370,AT3G01290,AT2G43510,AT3G23250,AT4G27970,AT3G18250,AT2G37750,AT4G35180,AT2G41230,AT1G76930,AT5G12420,AT1G62790,AT3G50930,AT3G54150,AT3G25780,AT2G31945,AT1G29195,AT3G63010,AT4G21680,AT5G39610,AT1G52890,AT1G02850,AT3G49210,AT1G60740,AT4G12500,AT3G29810,AT4G38540,AT1G61820,AT5G01740,AT4G37990,AT1G03850,AT2G47550,AT3G01970,AT3G47480,AT1G15045,AT1G51890,AT1G74000,AT5G49700,AT3G55970,AT3G63380,AT3G46280,AT4G22470,AT1G69880,AT4G21830,AT4G25810,AT2G44790,AT1G30135,AT3G48520,AT4G21850,AT4G27860 MARCHIVE_3H_PNP+P-WT+P_DN Down-regulated by pnp1-1 +P vs WT +P in three hours (Table S3 PubmedID:19710229) AT5G06480,AT2G32500,AT2G26710,AT2G47880,AT1G06830,AT1G34760,AT2G45660,AT5G50740,AT5G52100,AT5G05090,AT4G28180,AT2G39470,AT1G67865,AT5G44680,AT3G23470,AT4G39770,AT1G22590,AT4G39710,AT1G14150,AT5G03260,AT5G48460,AT1G29500,AT2G21880,AT1G49975,AT4G02850,AT5G22390,AT4G23290,AT3G46370,AT1G29510,AT1G75250,AT1G33340,AT5G18060,AT1G29450,AT1G29440,AT1G13650,AT1G29430,AT4G28150,AT4G39970,AT4G19830,AT5G58310,AT1G64355,AT5G63780,AT5G18240,AT3G45860,AT3G51150,AT4G01460,AT1G62250,AT1G50280,AT1G69360,AT1G52870,AT4G24670,AT3G15570,AT2G42200,AT3G62160,AT1G47410,AT1G03400,AT1G17970,AT5G16400,AT2G01760,AT3G62660,AT5G66400,AT3G10060,AT1G78995,AT1G69523,AT3G03710,AT5G44410,AT3G11750,AT3G56810,ycf5,AT3G26490,AT1G15550,ndhJ,AT1G65230,AT5G39860,AT4G14560,AT3G53100,AT5G66080,AT3G13690,AT1G32220,AT5G02160,ATpA,AT5G06710,AT1G31335,AT1G51080,AT4G18390,AT5G65890,AT5G16940,AT1G70760,AT5G26230,AT3G53800,AT4G26520,AT1G10900,AT1G21500,AT5G59350,AT4G32880,AT3G19480,AT3G21060,AT1G19150,AT4G16515,AT2G22830,AT1G68540,AT1G79790,AT1G73655,AT3G44020,AT3G17640,AT1G73470,AT3G60380,AT1G18730,AT5G03050,AT1G53885,AT4G32590,AT5G43750,AT1G79460,AT1G75460,AT1G49230,AT1G67870,AT5G47370,AT2G36490,AT2G29670,AT5G14970,AT5G61340,AT1G75820,AT3G06160,AT3G09160,AT4G17360,AT2G01590,AT5G19260,AT4G12980,AT3G15095,AT5G02540,AT3G03840,AT1G20640,AT5G46240,AT2G20500,AT1G32080,AT3G18890,AT2G35760,AT1G29390,AT4G03100,AT3G07310,AT2G39930,AT1G52510,AT2G43550,AT2G03710,AT5G60930,AT3G25670,AT3G18800,AT2G22610,AT2G22330,AT3G09050,AT5G58260,AT5G02550,AT1G22160,AT5G19310,AT2G04850,AT3G25710,AT3G01810,AT4G13830,AT3G16000,AT1G70820,AT3G62390,AT1G31690,AT3G08920,AT4G09910,AT2G01870,AT5G57040,AT3G20420,AT2G34060,AT2G05310,AT2G21370,AT2G20260,AT5G08070,AT3G50790,AT4G03060,AT3G01960,AT5G49660,AT1G67860,AT4G10000,AT1G03630,AT4G27390,AT5G44720,AT2G21380,AT3G59490,AT1G56505,AT2G27290,AT3G01750,AT5G63710,AT5G26330,AT1G69526,AT1G78020,AT1G32100,AT2G31040,AT5G13290,AT5G45650,AT1G66890,AT5G55520,AT4G37240,AT2G42220,AT3G18500,AT3G62630,AT5G40500,AT2G18890,AT1G01900,AT3G61970,AT2G42190,AT3G51500,AT3G19400,AT5G63060,AT3G18980,AT3G55660,AT4G27700,AT3G50660,AT3G10940,AT3G59680,AT5G04080,AT1G03055,AT2G03310,AT1G05630,AT1G68810,AT1G21065,AT2G02450,AT3G14570,AT4G18780,AT3G46780,AT1G68520,AT1G34570,AT5G54670,AT4G09890,AT2G07707,AT5G08410,AT5G56540,AT3G26310,AT1G18710,AT1G26150,AT5G36120,AT4G26790,AT3G51510,AT3G07360,AT4G04340,AT3G23080,AT5G03370,AT2G03550,AT5G62550,AT5G37360,AT4G09900,AT3G21550,AT3G20570,AT3G29670,AT1G29700,AT5G10180,AT1G49780,AT2G26180,AT2G32290,AT4G35270,AT5G18760,AT3G51750,AT1G51340,psbJ,AT1G04110,psbL,AT3G16140,AT1G33170,AT3G46490,AT1G26130,AT5G41140,AT5G08330,AT3G28080,AT3G21055,AT5G43990,AT2G17300,AT2G37380,AT1G43790,AT1G77090,AT2G39850,AT1G22710,AT1G12990,rpl32,AT3G15780,AT3G02730,AT5G01880,AT5G59000,AT3G05640,AT2G46100,AT2G35870,AT2G42380,AT1G49750,AT5G50130,AT2G34190,AT1G06100,AT5G37790,AT2G38300,AT5G66800,AT5G65140,AT5G59050,AT4G23890,AT1G62430,AT1G03130,AT1G26920,AT4G18640,AT4G28160,AT1G03310,AT1G22140,AT2G40435,AT1G70210,AT3G62750,AT3G62700,AT5G02560,AT1G15820,AT5G17520,AT2G02020,AT5G55400,AT3G60390,AT5G56720,AT3G29760,AT1G53870,AT4G02770,AT3G20450,AT4G09560,AT1G52230,AT1G76100,AT5G65840,AT1G31680,AT1G24625,AT5G61350,AT2G30790,AT1G74640,AT1G05540,AT1G24330,AT1G04240,AT1G04760,AT1G64370,AT3G20300,AT3G09540,AT2G32860,AT3G45230,AT5G27280,AT3G45600,AT3G28420,AT1G70985,AT5G07700,AT5G11840,AT1G26820,AT5G64770,AT1G51400,AT3G13980,AT1G70420,AT1G64360,AT1G12480,AT1G18010,AT1G71480,AT3G19680,AT1G26600,AT3G52900,AT1G56670,AT4G35320,AT1G19330,AT2G22550,AT5G25840,AT1G13090,AT3G15560,AT4G24540,psbE,AT5G19140,AT5G01520,AT3G50340,AT4G38950,AT2G01990,AT3G61950,AT5G28910,AT2G35260,AT2G28870,AT2G39250,AT3G11410,AT4G00880,AT1G24400,AT5G19220,AT5G60490,AT2G14860,AT3G55760,AT1G78680,AT5G23750,AT1G20030,AT2G44300,AT1G11410,AT1G29395,AT5G61660,AT1G22690,AT5G53500,AT1G76350,AT1G12320,AT3G46590,AT3G19620,AT4G39940,AT5G65480,AT1G66980,AT1G75880,AT4G27440,AT5G61810,AT5G07580,AT1G69970,AT3G19370,AT1G65790,AT3G53720,AT5G67180,AT4G14680,AT1G14250,AT5G50160,AT3G03870,AT1G76020,AT2G42390,AT1G01360,AT4G29070,AT2G21830,AT4G18440,AT1G18360,AT3G50910,AT4G35300,AT2G14750,AT5G03140,AT1G26210,AT2G07675,AT2G20570,AT4G18270,AT3G48970,AT1G61260,AT3G05030,AT5G48370,AT3G62690,AT2G21650,AT3G26960,AT2G32160,AT1G02200,AT1G65450,AT2G41090,AT2G46650,AT4G13800,AT2G46530,AT3G25560,AT1G51805,AT3G13650,AT4G12910,AT2G04032,AT4G28250,AT1G31550,AT3G52180,AT2G40460,AT5G07460,AT2G12400,AT5G42250,AT5G59130,AT2G22190,AT2G16990,AT3G28007,AT1G73700,AT5G10430,AT2G30540,AT1G74810,AT1G76960,AT1G70900,AT5G03350,AT1G18870,AT5G44400,AT1G71130,AT5G49630,AT1G68600,AT2G38740,AT3G18000,AT2G17280,AT5G26220,AT5G24660,AT4G15210,AT4G17030 MARCHIVE_3H_PNP-P-WT-P_UP Up-regulated by pnp1-1 -P vs WT -P in three hours (Table S3 PubmedID:19710229) petD,rbcL,AT1G30160,AT2G21640,psbC,AT1G17960,AT5G20960,AT5G09570,AT1G52100,AT2G04050,AT5G26280,AT5G60250,AT4G15910,AT5G24280,AT1G36180,ndhB.1,AT1G28580,rpl20,AT2G04040,AT3G16770,AT3G06810,ycf9,AT4G12080,AT4G12470,AT5G26270,AT3G16430,AT1G76930,AT4G11650,AT5G13420,psbD,AT1G09420,AT4G15260,AT5G13330,AT1G69880,AT5G07440,AT1G72830,AT2G20800,AT1G24090,AT3G16170,AT5G64120,AT5G11410,AT1G73260,AT4G16260,AT5G39610,AT3G21600,AT1G02930,AT5G17330,AT3G26690,AT5G46050,AT4G12480,AT3G04070,AT4G01430,AT3G53480,AT5G64060,AT4G37530,AT2G36080,AT1G07390,AT5G43370,AT5G36220,AT1G30270,AT4G23700,AT5G50760,AT5G19550,AT2G23560,AT4G33150,AT3G22850,AT5G43580,AT4G02390,AT4G32650,AT3G49210,AT1G62480,AT5G44380,AT4G20110,AT3G44720,AT3G12500,AT2G37060,AT5G37500,AT1G17020,AT3G04720,AT5G07100,AT3G16450,AT3G20370,AT4G12490,AT1G19600,AT3G16620,AT4G15093,AT4G10380,AT1G80460,AT5G06860,AT2G44790,AT3G49620,rps16,AT3G29810,AT1G05710,AT4G01700,AT5G65750,AT5G43330,AT4G22960,AT1G26930,AT2G02930,AT1G06180,AT1G21650,AT1G59960,AT3G09270,AT5G15120,AT1G20390,AT5G39520,AT1G80160,AT1G03030,AT3G16390,AT3G27620,AT1G27980,AT1G35190,AT4G22470,AT1G77380,AT4G03320,AT5G61760,AT2G37750,AT1G10070,AT1G15380,AT1G69310,AT5G63970,AT1G20350,AT2G18600,petG,AT4G29140,AT1G23010,AT3G09260,AT5G23530,AT2G25000,AT1G52890,AT3G10450,AT2G26650,AT3G16460,AT3G27190,AT4G12500,AT2G43510,AT2G47680,AT5G40760,AT1G66760,AT1G22500,AT1G32870,AT1G55810,AT3G18250,AT1G23800,AT1G54340,AT5G44810,AT1G44800,AT5G18840,AT3G15950,AT4G12130,AT1G43910,AT4G19380,AT4G34710,rps18,AT3G15720,AT5G58350,AT5G24850,AT4G15530,AT3G61630,AT3G57600,AT5G65210,AT5G63760,AT3G61190,AT4G16760,AT3G05690,AT5G14180,AT2G37130,AT2G38870,AT5G25770,AT3G21230,AT1G05340,AT1G34180,AT3G14360,AT1G62810,AT2G30490,AT1G60740,AT3G52390,AT3G17810,AT3G21770,AT1G05000,AT3G28500,AT3G27220,AT4G27860,AT4G36990,AT1G65690,AT4G01720,AT1G74020,AT1G24260,AT1G13300,AT2G25590,AT1G33790,AT5G47810,AT5G53920,AT2G47270,AT3G19100,AT1G72070,AT3G49120,AT3G01970,AT1G29330,AT3G19270,AT4G36380,AT2G30550,AT5G59960,AT2G32280,AT1G18270,AT3G59930,AT3G44320,AT5G27520,AT4G08290,AT1G19610,AT1G13330,AT1G62660,AT1G33265,AT5G23850,AT2G19970,AT5G10300,AT3G20100,AT4G21830,AT1G07610,AT1G22900,AT3G55970,AT5G38780,AT3G61990,AT5G59090,AT1G65560,AT3G16340,AT5G01970,AT5G11460,AT5G13080,AT5G40690,AT3G61530,AT1G55020,AT5G11260,AT3G24000,AT3G22460,AT4G23680,AT2G38530,AT4G38210,AT4G27590,AT4G13660,AT3G44970,AT3G19660,AT4G28040,AT3G02875,AT3G43270,AT1G54010,AT3G14700,AT3G13910,AT1G23120,AT5G63690,AT1G28130,AT2G22770,AT5G56870,AT1G71050,AT5G17650,AT2G02850,AT1G65480,AT5G57785,AT1G14120,AT1G56010,AT3G14060,AT2G16790,AT3G55120,AT5G18270,AT4G18360,AT5G03670,AT3G10190,AT5G60460,AT1G25275,AT5G44820,AT3G18510,AT2G39310,AT5G08260,ycf6,AT5G57240,AT2G18050,AT1G09740,AT5G18200,AT1G26690,AT2G22660,AT3G56170,AT3G48530,AT3G21240,AT1G62290,AT1G21460,AT1G17590,AT3G62270,AT1G11270,AT1G15790,AT2G47260,AT2G45510,AT4G21610,AT3G54990,AT2G43350,AT4G02050,AT2G16700,AT3G03270,AT1G54030,AT5G58375,AT3G57360,rps14,AT5G62680,psbN,AT5G16450,AT1G28260,AT1G65500,AT2G28820,AT3G20470,AT2G45050,AT2G01540,AT5G65020,AT3G47840,AT4G18910,AT5G57900,AT2G35820,AT5G26731,AT1G27300,AT3G61090,AT2G43780,AT4G39740,AT5G04910,AT1G32260,AT5G63030,AT2G21180,AT5G39730,AT3G51000,AT2G29995,AT4G12010,AT3G47590,AT3G19110,AT1G67760,AT1G13410,AT1G68300,AT1G14790,AT4G05370,AT5G01840,AT3G05750,AT5G53240,AT1G54120,AT1G12400,AT5G66040,AT1G78780,AT3G30460,AT1G53030,AT5G04750,AT5G65420,AT2G43540,AT4G16750 MARCHIVE_3H_PNP-P-WT-P_DN Down-regulated by pnp1-1 -P vs WT -P in three hours (Table S3 PubmedID:19710229) AT5G41740,AT4G24160,AT5G11510,AT1G27770,AT5G15870,AT3G11820,AT5G47800,AT5G39020,AT4G18880,AT1G28380,AT1G21250,AT2G48030,AT5G44070,AT5G62570,AT2G23770,AT4G23810,AT2G01180,AT1G19770,AT4G02410,AT1G76600,AT3G59080,AT3G62720,AT4G23270,AT1G29690,AT4G31000,AT5G57580,AT4G34150,AT5G63330,AT1G79710,AT3G23890,AT1G72670,AT4G28680,AT3G02800,AT3G53680,AT3G03680,AT1G23790,AT1G77390,AT1G50010,AT4G09160,AT3G05320,AT4G14330,AT2G15440,AT5G23350,AT3G45640,AT4G19020,AT1G21270,AT3G60200,AT2G28620,AT1G73590,AT1G29720,AT3G56880,AT1G15410,AT4G02200,AT2G41880,AT1G50110,AT5G60020,AT2G33560,AT1G54130,AT5G45340,AT4G31550,AT3G11650,psbF,AT5G01930,AT5G51600,AT2G35650,AT4G35350,AT2G47060,AT3G17990,AT4G19660,AT3G16920,AT2G38320,AT3G61820,AT1G49840,AT5G15510,AT2G19440,AT3G17330,AT5G07080,AT5G16190,AT1G30690,AT1G33811,AT4G00970,AT3G62020,AT1G11050,AT5G43500,AT1G10060,AT3G46290,AT5G44060,AT1G57990,AT1G17990,AT5G67270,AT1G66090,AT1G05540,AT3G03710,AT3G56810,AT1G74640,AT2G47880,AT5G06480,AT3G19620,psbJ,AT3G26490,AT3G17640,AT3G06160,AT2G07707,AT1G18710,AT5G14970,AT5G41140,AT1G67865,AT2G16990,psbE,AT5G48370,AT1G22160,AT3G23080,AT1G64360,AT2G02020,AT5G60490,AT1G04110,AT4G00880,AT3G46780,AT3G05030,psbL,AT1G29500,AT1G29510,AT3G50790,AT1G75820,AT3G11410,AT2G34060,AT5G05090,AT1G62430,AT2G32500,AT5G50160,AT5G08070,AT4G13800,AT5G61660,AT1G68810,AT1G32220,AT2G39250,AT2G39850,AT4G14560,AT5G03050,AT1G13650,AT4G38950,AT4G12980,AT4G03100,AT5G01520,AT5G10180,AT1G29440,AT1G65790,AT1G18360,AT1G73700,AT1G06830,AT4G18270,AT3G26960,ATpA,AT5G49630,AT4G28180,AT4G39970,AT3G62690,AT3G18500,AT1G19330,AT1G20640,AT2G22610,AT5G62550,AT2G36490,AT2G32160,AT2G02450,AT1G70420,AT5G59130,AT5G18760,AT5G53500,AT1G70210,AT1G68600,AT1G49230,AT2G17300,AT2G38300,AT4G12910,AT1G33170,AT3G25710,AT3G45230,AT3G20300,AT5G50130,AT4G28250,AT1G22710,AT2G32860,AT1G12990,AT5G63060,AT2G22190,AT5G03350,AT3G29760,AT2G42200,AT2G17280,AT1G03400,AT3G45860,AT5G50740,AT2G37380,AT4G37240,AT1G06100,AT3G50910,AT2G21880,AT4G32880,AT3G13980,AT2G26180,AT2G29670,AT3G62160,AT2G12400,AT5G19260,AT5G08330,AT2G41090,AT3G21550,AT3G18980,AT2G22830,AT5G60930,AT3G28420,AT1G24400,AT1G61260,AT4G18780,AT1G34760,AT3G55660,AT1G26210,AT1G18010,AT3G62630,AT2G40460,AT4G27440,AT4G24540,AT5G45650,AT5G48460,AT1G49780,AT1G03130,AT4G18640,AT1G51805,AT5G42250,AT4G14680,AT1G04760,AT5G54670,AT1G70985,AT2G20570,AT3G46490,AT5G02540,AT5G44400,AT3G21060,AT3G18000,AT5G66800,AT2G21650,AT5G55520,AT2G34190,AT2G34770,AT4G36550,AT3G04210,AT1G73600,AT4G04610,AT2G43290,AT2G46780,AT2G35710,AT1G07880,AT1G12030,AT1G70740,AT3G19380,AT3G56400,AT3G56710,AT2G16270,AT4G23180,AT3G12110 MARCHIVE_1W_PNP+P-WT+P_UP Up-regulated by pnp1-1 +P vs WT +P in one week (Table S4 PubmedID:19710229) petD,AT3G20370,AT5G09570,AT2G24850,AT2G02850,psbD,AT3G09940,AT5G51440,AT1G52100,AT5G26270,AT1G22440,AT2G32020,AT2G41730,AT2G47000,AT2G27690,AT4G39030,AT1G30135,AT4G21830,AT4G08770,AT1G54010,AT4G13660,AT4G21850,AT5G67080,rbcL,AT3G50930,AT5G05340,AT1G35230,AT3G44970,AT1G14120,AT5G62480,AT1G80820,rpl20,AT1G30160,AT4G36700,AT2G20800,AT4G27860,AT3G63380,AT3G16450,AT2G04050,AT4G23700,AT3G29250,AT5G26280,AT3G15950,AT1G17420,AT3G25180,AT3G09410,AT1G61120,AT4G16260,AT1G79680,AT5G26260,AT5G63600,AT1G29280,AT5G39890,AT3G09260,AT1G32870,AT2G14610,AT4G11650,rps14,AT1G64170,AT5G42830,AT1G51890,AT2G21640,AT1G20350,AT2G18660,AT4G19810,AT1G55020,AT3G25780,AT5G25260,AT2G42360,AT2G20720,ndhB.1,AT2G38940,AT1G01560,AT2G19970,AT4G29740,AT4G01700,AT4G12500,AT1G17960,AT2G32190,AT4G33070,AT3G13950,AT2G39310,AT5G18270,AT1G33960,AT5G16080,AT3G12500,AT3G44860,AT1G30700,AT5G60250,AT3G61630,AT1G73260,AT3G50760,AT3G16460,AT5G43370,AT5G11920,AT5G13220,AT1G54020,AT2G18690,AT5G64060,AT5G44380,AT4G39670,AT2G03760,AT4G22960,AT5G13080,AT1G43910,AT1G28370,AT3G10930,AT5G64100,AT1G24090,AT4G23210,AT3G54150,AT1G65690,AT5G66985,AT1G72520,AT1G30040,AT3G24954,AT1G36180,AT2G05510,AT5G49520,AT5G10760,AT5G03350,AT3G53480,AT1G63530,AT2G04070,AT4G36430,AT4G35180,AT5G44910,AT4G23680,psbC,AT1G76930,AT2G18600,AT1G17380,AT4G25110,AT3G01420,AT5G46050,AT5G40690,AT5G22250,AT1G26420,AT1G69930,AT1G79450,AT3G21500,AT4G24110,AT2G22880,AT3G16430,AT1G35910,AT3G09270,petG,AT3G46280,AT5G65020,AT2G39030,AT4G02330,AT3G55840,AT3G49210,AT5G64110,AT2G39650,AT3G09220,AT5G55450,AT5G38020,AT4G14365,AT2G32030,AT3G16390,AT3G21230,AT1G21310,AT5G55560,AT4G37370,AT1G17830,AT1G57630,AT1G32350,AT5G47960,AT3G01830,AT2G20145,AT1G73800,AT5G17330,AT2G36790,AT5G01040,AT1G03850,AT1G21520,AT3G44320,AT5G44820,AT3G20470,AT2G44010,AT3G13790,AT3G14700,AT2G16060,AT2G32210,AT1G14870,AT2G28190,AT3G25900,AT5G44390,AT1G28480,AT2G27660,AT5G15120,AT5G52760,AT4G11890,AT3G51450,AT1G66090,AT3G18250,AT5G48430,AT3G23250,AT2G39350,AT2G26560,AT1G10170,AT1G08830,AT5G57240,AT3G50260,AT2G23680,AT5G01540,AT5G24280,AT5G40780,AT3G22370,AT1G02360,AT5G25930,AT1G51790,AT3G04010,AT2G04100,AT1G36060,AT3G23150,AT1G27730,AT2G28820,AT2G38750,AT4G04490,AT2G15120,AT5G55050,AT5G43580,AT2G16570,AT4G30280,AT3G48580,AT2G26440,AT3G57260,AT1G78780,AT5G64120,AT4G21680,AT4G39320,AT1G08050,AT5G43170,AT4G32870,AT3G25640,AT4G10380,AT1G52890,AT2G04450,AT2G44790,AT2G02990,AT2G38860,AT1G22900,AT2G44380,AT1G14780,AT1G19180,AT5G44810,AT3G28210,AT4G22470,AT2G45080,AT5G01870,AT4G10390,AT1G15870,AT3G14680,AT1G19020,AT5G41740,AT4G12470,AT5G36220,AT1G30720,AT2G22500,AT4G19230,AT2G38530,AT4G32650,AT5G59820,AT4G37010,AT5G24290,AT2G29740,AT1G52200,AT3G16660,AT5G43450,AT3G27190,AT4G29780,AT1G51850,AT4G21120,AT5G23820,AT1G67520,AT4G04460,AT5G62150,AT3G20440,AT1G54030,AT3G26210,AT1G23140,AT4G24570,AT3G03270,AT3G25610,AT2G44370,AT1G23550,AT1G32690,AT1G61800,AT3G04720,AT3G02240,AT5G60730,AT1G02930,AT1G01480,AT5G17760,AT1G67100,AT5G20400,AT2G35930,AT5G38900,AT4G10270,AT5G12420,AT1G08940,AT5G39050,AT3G01970,AT3G28340,AT2G40330,AT3G50480,AT2G29995,AT1G75900,AT3G63010,AT2G41380,AT3G50900,AT4G17470,AT1G52410,AT3G61990,AT3G21770,AT1G33790,AT3G12700,AT5G52750,AT2G06050,AT5G20960,AT2G37750,AT1G76650,ycf9,AT2G27310,AT4G36990,AT4G20860,AT4G23190,AT5G54490,AT3G19010,AT4G15093,AT1G65500,AT2G02010,AT2G39210,AT3G50740,AT2G38250,AT3G49320,AT5G50760,AT1G17060,AT4G39830,AT4G25900,AT3G03060,AT2G39710,AT5G14930,AT3G52400,AT2G02930,AT2G43510,AT4G15910,AT5G23850,AT1G06620,AT5G10300,AT4G18360,AT3G25870,AT2G43530,AT2G17740,AT1G74010,AT3G02550,AT1G67330,AT4G12130,AT3G51440,AT4G18910,AT5G38030,AT3G46690,AT3G09010,AT2G26400,AT3G44720,AT2G24600,AT2G05910,AT4G36220,AT5G43330,AT4G36010,AT4G10960,AT2G04080,AT5G19550,AT1G13340,AT3G57450,AT2G19190,AT1G63720,AT5G25440,AT2G28400,AT1G23100,orf240a,AT3G11840,AT5G05600,AT1G23710,AT2G45510,AT5G60950,ycf6,AT1G71140,AT1G09560,AT2G43570,AT3G16470,AT5G45280,AT1G23120,AT1G19380,AT1G65400,AT1G27030,AT2G30840,AT1G59960,AT5G54100,AT2G45220,AT1G11580,AT1G74210,AT1G17860,AT4G14440,AT5G21105,AT1G21010,AT3G22160,AT1G19200,AT1G78210,AT1G68290,AT1G71400,AT2G36690,AT3G52450,AT1G61820,AT4G16240,AT2G30550,AT1G19670,AT1G07390,AT3G18830,AT5G49280,AT3G49120,AT4G12480,AT5G13330,AT3G04640,AT3G27280,AT1G66160,AT1G50400,AT1G42990,AT2G30500,AT4G23010,AT2G38760,AT1G52000,AT1G22360,AT2G15760,AT2G04040,AT4G39640,AT4G27270,AT4G39840,AT4G29140,AT1G67470,AT3G22850,AT2G31945,AT1G11670,AT5G09590,AT3G19930,AT1G77920,AT2G30140,AT3G45450,AT2G29420,AT3G44260,AT1G32940,AT4G08850,AT1G55920,AT1G34750,AT5G39610,AT2G16630,AT2G22170,AT5G24160,AT4G20830,AT3G26440,AT2G48090,AT3G55470,AT2G02810,AT1G66880,AT5G33290,AT1G69870,AT3G57760,AT4G34150,AT3G46110,AT2G44450,AT4G27480,AT4G12550,AT5G02220,AT2G33210,AT1G55210,AT3G19660,AT3G47540,AT2G31880,AT1G20510,AT1G74100,AT1G51780,AT1G33600,AFFX-AThal-GAPDH_5,AT4G05590,AT2G38870,AT3G02140,AT4G18950,AT4G20110,AT5G06550,AT5G06870,AT5G53750,AT5G55120,AT3G28500,AT1G22400,AT5G13200,AT5G56090,AT1G30900,AT2G36970,AT2G19570,AT5G63970,AT4G15230,AT1G35720,AT3G62150,AT2G36220,AT5G56350,AT5G47220,AT3G53280,AT3G26220,AT4G34230,AT4G22710,AT2G43535,AT1G71880,AT1G45145,AT3G52470,AT5G34940,AT5G42010,AT4G17500,AT4G12490,AT5G26030,AT1G77510,AT3G13910,AT5G56500,AT5G54860,AT3G61190,AT4G01750,AT2G35480,AT5G12010,AT5G62070,AT5G62680,AT5G06750,AT2G46400,AT1G74440,AT4G37910,AT4G24120,AT1G76390,AT3G16770,AT5G55200,AT1G14370,AT1G75040,AT5G37600,AT5G47910,AT3G26970,AT5G22630,AT1G09300,AT4G08470,AT5G64660,AT1G72940,AT1G44350,AT4G03960,AT3G28940,AT3G14620,rps18,AT2G30250,AT2G39660,AT1G63220,AT3G53810,AT1G51280,AT4G04960,AT4G21620,AT1G62840,AT3G26980,AT2G17630,AT4G27652,AT5G58120,AT3G04120,AT1G79530,AT1G74030,AFFX-r2-AT-GAPDH-5,AT3G25600,AT5G06860,cox1,AT3G23990,AT1G59970,AT1G66620,AT4G09570,AT5G46780,AT3G01290,AT4G18170,AT2G31060,AT4G38420,AFFX-r2-AT-GAPDH-3,AT1G74790,AT1G73500,AT4G27350,AT5G66070,AT5G18400,AT2G16700,AT1G17290,AT5G23810,AT5G06320,AT1G73680,AT1G30620,AT3G21240,AT4G12080,AT4G30530,AT5G20050,AT3G26840,AT4G01480,AT2G39420 MARCHIVE_1W_PNP+P-WT+P_DN Down-regulated by pnp1-1 +P vs WT +P in one week (Table S4 PubmedID:19710229) AT3G27260,AT4G38570,rpl23.1,AT2G30010,AT2G35880,AT5G03130,AT3G63140,AT1G27850,AT5G13410,AT4G14500,AT5G50210,AT1G74840,AT3G11490,AT2G03310,AT5G14970,AT3G07310,AT5G44060,AT5G17520,AT1G06760,AT1G14920,AT2G13540,AT2G41820,AT4G35470,AT5G54250,AT1G69040,AT5G26910,AT3G47010,AT5G44030,AT5G15020,AT2G32500,AT2G45850,AT1G22050,AT1G65230,AT5G20885,AT3G18270,AT2G45660,AT5G04940,AT2G39470,AT1G03300,AT3G28080,AT1G49890,AT3G10520,AT3G18370,psbJ,AT1G21790,AT1G15000,AT5G35790,AT1G80180,AT4G38430,AT3G06590,AT2G44440,AT4G09810,AT2G04240,AT5G15760,AT1G17970,AT5G45310,AT1G58220,AT1G73470,AT2G01420,AT5G11430,AT3G15780,AT4G33810,AT3G16920,AT3G16750,AT3G27020,AT3G01670,AT4G22540,AT4G31720,AT5G27290,AT5G52100,AT1G56430,AT4G03190,AT3G62660,AT5G16940,AT1G11280,AT2G28760,AT1G78580,AT1G60800,AT2G03550,AT4G01330,AT3G61260,AT1G23050,AT3G58690,AT3G45260,AT5G18130,AT1G19220,AT3G26490,AT1G15550,AT5G58260,AT3G17100,AT1G28440,AT4G18390,AT3G17640,AT5G18210,AT1G72250,AT1G29950,AT4G23750,AT2G34710,psbF,AT2G16090,AT1G71750,AT4G28260,AT4G10000,AT3G62020,AT1G65420,AT3G23470,AT5G06710,AT3G08600,AT4G24810,AT3G53960,AT3G56810,AT5G12900,AT2G37450,AT2G22980,AT5G41060,AT1G77490,AT5G02010,AT5G05160,AT3G51950,AT3G21760,AT3G61700,AT5G58950,AT2G40540,AT2G38330,AT4G39970,AT1G62050,AT5G37630,psbL,AT5G61660,AT1G20380,AT3G55630,AT1G67440,AT3G29370,AT5G48370,AT2G23760,AT1G76410,AT4G13830,AT4G12690,AT3G50780,AT1G03400,AT5G44410,AT1G67910,AT2G20680,AT2G30580,AT1G52550,AT1G12860,psbE,AT3G13690,AT2G01830,AT4G14560,AT1G68520,AT3G18050,AT3G14067,AT1G01740,AT1G72820,AT4G25170,AT1G32080,AT3G01660,AT5G39210,AT1G02640,AT4G34980,AT5G03180,AT1G24625,AT5G43500,AT3G51150,AT5G42750,AT4G39710,AT1G78020,AT3G01440,AT4G37220,AT1G64110,AT5G63530,AT2G29680,AT1G75460,AT3G28860,AT5G56590,AT5G43270,AT1G75820,AT5G59350,AT3G57680,AT2G28240,AT4G36550,AT1G79700,AT1G46768,AT1G70790,AT2G20500,AT1G56720,AT5G02160,AT2G44900,rps12.2,AT1G25230,AT1G14380,AT3G27200,AT5G02260,AT5G61340,AT1G01620,AT1G34110,AT1G33700,AT1G47410,AT1G62430,AT1G29390,AT4G11900,AT1G17430,AT3G53400,AT3G61210,AT4G02850,AT3G18980,AT5G58300,AT5G05690,AT4G29080,AT2G40670,AT4G32880,AT4G33580,AT3G44610,AT3G19620,AT4G04630,AT2G26710,AT1G03520,AT3G53100,rps7.1_chloroplast,AT1G50280,AT3G13510,AT1G18010,AT2G30890,AT4G28270,AT3G21060,AT1G27460,AT1G20850,AT5G10180,AT2G42900,AT5G57610,AT1G01240,AT4G20070,AT4G10910,AT2G07680,AT1G33340,AT1G01990,AT4G24050,AT4G28180,AT1G49840,AT1G67865,AT3G63210,AT3G15095,AT1G15410,AT4G09890,AT3G50910,AT2G46690,AT3G50660,AT4G35350,AT5G51890,AT2G38080,AT1G18620,AT3G23080,AT3G21550,AT5G16480,AT4G18270,AT5G12440,AT3G54790,AT4G39770,AT1G70080,AT5G64780,AT5G57100,AT5G13290,AT1G73120,AT2G20240,AT5G49640,AT5G03260,AT4G37080,AT4G34560,AT5G60020,AT5G48460,AT3G13730,AT5G16000,AT4G11080,AT2G32860,AT4G18780,AT5G47640,AT3G46590,AT5G60490,ycf5,AT3G62630,AT1G22590,AT5G55970,AT5G05890,AT5G56040,AT3G46370,AT3G05640,AT1G70830,AT4G36540,AT3G03710,AT3G62390,AT1G68400,AT1G32100,AT1G74890,AT5G44680,AT2G40480,AT4G04955,AT1G23080,AT1G68110,AT5G01520,AT3G55500,AT3G29670,AT5G05090,AT4G23060,AT2G20210,AT1G22335,AT2G38180,AT1G35612,AT3G54720,AT3G03870,AT1G14700,AT4G01460,AT1G49200,AT3G02020,AT4G34220,AT2G01760,AT5G01880,AT1G49975,AT3G29270,AT1G70900,AT1G29510,AT1G64360,AT5G05960,AT3G23880,AT3G04210,AT2G20570,AT3G13000,ATpA,AT1G22740,AT3G28007,AT5G61420,AT3G62930,AT1G52190,AT5G06480,AT1G52250,AT2G36490,AT3G13980,AT1G68190,AT3G15570,AT3G62950,AT5G02020,AT1G20190,AT2G30790,AT3G45160,AT5G03170,AT2G44740,AT2G03710,AT4G16000,AT1G06830,AT5G59320,AT2G42870,AT5G54190,AT5G66400,AT1G29395,AT2G37870,AT2G47880,AT1G34760,AT3G02480,AT5G59310 MARCHIVE_1W_PNP-P-WT-P_UP Up-regulated by pnp1-1 -P vs WT -P in one week (Table S4 PubmedID:19710229) petD,rps14,psbD,rpl20,AT2G32020,AT5G62480,rbcL,AT5G26270,AT1G17960,ndhB.1,AT1G52100,AT3G20370,AT1G33960,AT1G36180,AT2G18660,AT2G47000,AT2G20720,AT5G02780,psbC,AT2G41730,AT2G46750,AT5G22570,AT2G04070,AT2G21640,AT2G14610,AT4G35180,AT2G20800,psbA,ycf3,AT1G35230,AT5G57240,AT5G10760,AT5G26280,AT1G30160,AT2G04050,petG,AT1G32870,AT4G01700,AT5G60900,AT1G51890,AT1G54010,AT2G19970,AT1G74590,AT1G26410,AT4G18430,AT1G02360,AT3G15950,AT5G42830,AT3G61630,AT4G12500,AT1G24090,psaA,AT1G20350,AT3G09220,AT2G19190,AT4G18250,AT3G53150,AT4G25110,rps16,AT4G04490,AT2G18600,AT2G14620,ycf9,AT3G20440,AT3G16450,AT2G03760,ccb382,AT1G14120,AT5G50260,AT1G33790,AT1G32350,AT1G22900,AT1G57630,mATK,AT1G26420,AT3G16460,AT3G09260,AT5G25260,AT3G16660,AT3G21500,AT4G34360,AT2G17740,AT3G11050,AT1G35710,AT5G23820,AT3G13950,AT1G30900,AT5G67340,AT1G68450,AT5G64110,AT1G76930,AT4G39830,AT2G39310,AT3G25640,AT2G18690,AT1G55020,AT1G23100,AT1G02940,AT2G15760,AT1G08050,AT3G49320,AT5G44810,AT3G16430,ycf6,AT2G43570,AT1G10170,AT1G74440,AT5G38900,AT4G29740,AT3G50900,AT3G28500,AT1G28370,rps18,AT4G15910,AT5G65020,AT3G16390,AT1G65690,ORF31,AT1G65500,AT3G03270,cox1,AT1G59590,AT4G23130,AT1G80820,AT2G38250,AT2G26440,AT1G45145,AT4G29140,rpl33,AT3G11010,AT1G68795,AT5G23850,AT4G23150,rpl22,AT5G54100,AT2G02810,AT5G48470,AT4G22950,AT1G55210,AT5G10300,AT4G15093,AT2G35480,AT5G56090,AT1G54030,AT5G43330,AT3G47540,AT1G75450,AT5G20960,rps19,AT5G45490,AT2G30500,AT3G05410,AT2G36930,AT1G68765 MARCHIVE_1W_PNP-P-WT-P_DN Down-regulated by pnp1-1 -P vs WT -P in one week (Table S4 PubmedID:19710229) AT5G47550,AT5G14880,rpl23.1,AT2G22990,AT5G63410,AT2G02130,AT2G23150,AT2G39010,psbE,AT2G04240,AT1G68520,AT2G41820,AT5G55960,AT3G46590,AT2G43060,AT5G61660,AT1G23050,AT1G20440,AT5G18130,AT4G00880,AT3G23080,ATpA,AT1G70790,AT3G18980,AT1G50110,AT3G03870,AT1G01240,AT5G47640,AT3G07990,AT3G16360,AT1G15550,AT1G20450,AT3G19620,AT2G12400,AT3G62860,AT2G42610,AT5G55970,AT4G16000,AT2G36490,AT1G03020,AT1G73040,AT4G01390,AT5G60490,AT3G49580,AT3G15270,AT4G18270,AT2G21590,AT5G65390,AT3G50910,AT1G04240,AT3G15570,AT1G20190,AT1G64360,AT2G16990,AT1G22500,AT5G04950,AT1G68600,AT3G45160,AT2G03020,AT5G01520,AT1G73120,AT4G24890,AT1G70080,AT2G03710,AT5G48850,AT5G02020,AT4G17030,AT5G50800,AT1G56600,AT5G59310 MARCHIVE_1W_WT-P-WT+P_UP Up-regulated by WT-P vs WT+P in one week (Table S4 PubmedID:19710229) AT1G73010,AT5G20790,AT2G38940,AT2G11810,AT1G17710,AT1G08310,AT5G05340,AT2G45130,AT2G46880,AT3G03540,AT5G20150,AT5G20410,AT5G17340,AT5G09570,AT3G05630,AT3G02040,AT1G08650,AT3G43110,AT1G23140,AT2G04460,AT3G17790,AT5G02200,AT5G43370,AT4G36350,AT4G24890,AT1G26390,AT4G03960,AT3G47420,AT1G19200,AT1G13750,AT1G67600,AT3G44520,AT3G04530,AT4G17030,AT5G08030,AT4G19810,AT1G21310,AT1G56600,AT3G22600,AT5G09530,AT3G12500,AT4G23700,AT5G50800,AT3G44510,AT4G14630,AT1G26380,AT5G63130,AT5G67080,AT5G09470,AT3G23430,AT1G73220,AT1G52940,AT3G52820,AT5G39720,AT1G02310,AT2G29490,AT4G11650,AT1G67810,AT1G69930,AT2G32830,AT3G01420,AT1G68620,AT3G29250,AT2G15120,AT1G30700,AT2G36970,AT4G37290,AT1G74210,AT4G16260,AT1G61800,AT3G48850,AT1G74010,AT4G23000,AT2G38390,AT3G48580,AT1G17830,AT2G01890,AT2G43535,AT3G08720,AT4G15210,AT5G01220,AT2G14610,AT2G44450,AT2G45220,AT2G41380,AT3G21500,AT2G03020,AT5G48850,AT5G24660,AT3G49160,AT3G02980,AT2G32190,AT3G09270,AT4G33770,AT3G28740,AT3G49580,AT1G73260,AT1G32350,AT3G13950,AT1G22170,AT1G48370,AT1G65690,AT1G17180,AT3G19970,AT2G37890,AT3G59140,AT4G34135,AT3G27190,AT2G02990,AT1G17170,AT5G26220,AT1G17745,AT4G22530,AT4G39670,AT5G64000,AT1G73330,AT3G43190,AT1G55020,AT1G72070,AT3G17990,AT4G36430,AT2G29460,AT1G68740,AT4G33030,AT1G03020,AT3G52190,AT3G58550,AT4G11280,AT3G53480,AT1G79680,AT2G27190,AT2G17280,AT5G01600,AT1G74590,AT3G04720,AT2G26660,AT3G03790,AT4G01480,AT5G40690,AT3G50760,AT3G53620,AT1G05000,AT2G05510,AT2G30750,AT5G38900,AT5G54490,AT4G31240,AT4G01390,AT4G18360,AT3G18000,AT4G00500,AT3G56040,AT5G53420,AT2G39030,AT1G53310,AT4G10960,AT4G37010,AT2G29420,AT4G26200,AT5G44380,AT5G50760,AT1G76690,AT1G01560,AT1G28480,AT1G80820,AT1G68450,AT2G40300,AT5G17330,AT3G04010,AT3G56090,AT1G72890,AT2G22470,AT1G27730,AT3G10150,AT5G39050,AT1G05560,AT4G02050,AT1G67920,AT1G68600,AT5G51050,AT5G53870,AT1G62570,AT3G22620,AT1G57630,AT1G08920,AT2G15390,AT3G21560,AT3G09010,AT5G01540,AT2G18690,AT3G12700,AT1G14870,AT3G25290,AT5G20400,AT4G01870,AT4G13180,AT1G50110,AT5G10740,AT1G64710,AT5G13750,AT5G25930,AT2G47000,AT1G65500,AT4G30280,AT3G18250,AT1G75270,AT4G01700,AT1G17860,AT4G38320,AT2G46440,AT1G71130,AT1G35720,AT1G35230,AT3G20660,AT5G06860,AT4G17790,AT2G36790,AT3G16360,AT4G19880,AT5G60270,AT3G21240,AT1G79410,AT1G31120,AT3G05690,AT3G15270,AT3G14680,AT3G45060,AT3G09560,AT3G21230,AT1G26420,AT3G04640,AT3G59010,AT1G27760,AT4G24110,AT2G32210,AT5G46050,AT4G21470,AT1G21250,AT1G55920,AT3G57700,AT2G04160,AT1G52890,AT3G26840,AT5G44610,AT4G01430,AT3G15990,AT1G32940,AT4G24120,AT1G74020,AT2G22500,AT1G22400,AT1G72900,AT2G43570,AT1G70900,AT1G68650,AT1G70080,AT4G36990,AT1G72520,AT5G54840,AT1G28600,AT2G43510,AT2G04040,AT4G34200,AT2G28710,AT1G77450,AT5G43580,AT3G14620,AT3G13790,AT3G57760,AT4G38420,AT2G39710,AT4G10380,AT4G25900,AT4G05020,AT4G19960,AT3G16530,AT1G06180,AT5G21105,AT3G51450,AT3G21770,AT5G17860,AT4G17880,AT5G47910,AT5G64550,AT5G13200,AT5G57610,AT5G64120,AT5G50200,AT3G25870,AT1G30620,AT2G17500,AT5G62150,AT5G63790,AT1G09560,AT1G14130,AT1G60730,AT5G64230,AT3G02875,AT2G38870,AT4G01070,AT1G75040,AT5G49280,AT2G40710,AT4G18950,AT1G66480,AT4G12470,AT1G17380,AT3G61190,AT1G02930,AT4G12080,AT3G61990,AT4G28490,AT3G03310,AT5G54510,AT2G23150,AT5G36940,AT3G10320,AT3G14020,AT5G13490,AT1G19020,AT3G16340,AT5G38530,AT4G36010,AT5G61010,AT5G54860,AT5G19430,AT4G20830,AT3G49120,AT3G51430,AT1G69870,AT4G02940,AT4G15620,AT1G25370,AT4G02330,AT1G30500,AT3G03250,AT1G77920,AT4G22470,AT4G12500,AT5G46080,AT5G36220,AT3G22160,AT2G45510,AT2G30140,AT1G45145,AT2G19880,AT4G39730,AT5G47220,AT4G08390,AT1G76930,AT3G04000,AT5G61510,AT3G44720,AT3G59300,AT3G06420,AT5G17380,AT1G02850,AT2G31945,AT5G59820,AT5G39610,AT1G76520,AT2G22560,AT2G02130,AT3G13910,AT1G28370,AT5G19440,AT1G06640,AT4G34230,AT5G26030,AT3G13110,AT1G11840,AT1G74790,AT4G18700,AT5G67600,AT4G04040,AT1G22070,AT5G63680,AT3G22850,AT2G43620,AT5G44240,AT1G22410,AT1G78860,AT5G16970,AT3G18830,AT3G46110,AT5G01720,AT2G30550,AT4G22710,AT1G31550,AT5G39090,AT1G29330,AT2G19570,AT1G07750,AT1G55210,AT1G01720,AT5G34940,AT4G27652,AT5G39730,AT4G35750,AT3G21710,AT4G34180,AT1G10410,AT1G54570,AT2G36885,AT4G26620,AT4G30490,AT4G34310,AT4G15490,AT5G22270 MARCHIVE_1W_WT-P-WT+P_DN Down-regulated by WT-P vs WT+P in one week (Table S4 PubmedID:19710229) AT3G56360,AT1G47400,AT5G05250,AT4G16370,AT3G19550,AT1G48300,AT4G37610,AT3G52070,AT5G51390,AT2G45660,AT5G08350,AT5G13740,AT1G67910,AT2G22980,AT5G18600,AT2G32880,AT3G62950,AT2G40670,AT3G15720,AT5G45310,AT1G23020,AT4G15660,AT4G31850,AT2G36145,AT4G15690,AT2G29680,AT5G38290,AT3G05410,AT5G27290,AT5G64240,AT4G15700,AT3G18290,AT2G40420,AT4G15680,AT5G64410,AT1G64355,AT1G76410,AT3G61210,AT1G06830,AT1G02640,AT2G02500,AT4G01330,AT4G12690,AT3G20680,AT5G16715,AT5G66520,rps12.1,AT1G79700,AT1G68110,AT2G20240,AT5G64780,AT1G49200,AT2G42900,AT3G62930,AT3G23470,AT5G39210,AT1G77490,AT1G17650,AT4G39770,AT5G02260,AT5G42670,AT1G03520,AT5G15760,AT1G11280,AT2G42870,AT4G10910,AT4G28180,AT1G50280,AT5G06480,AT2G40690,AT2G01400,AT1G35612,AT1G72250,AT5G52100,AT4G02850,AT2G37450,AT2G32500,AT3G01980,AT3G56810,AT5G13730,AT1G22335,AT2G44740,psaC,AT1G78580,AT3G51150,AT2G01860,AT3G14330,AT4G16000,AT5G36910,AT2G17880,AT1G65420,AT1G12860,AT1G33340,AT5G05890,AT5G60020,AT4G23750,AT1G74890,AT3G46370,AT4G37220 MARCHIVE_1W_PNP-P-PNP+P_UP Up-regulated by pnp1-1 -P vs pnp1-1 +P in one week (Table S4 PubmedID:19710229) AT1G73010,AT5G20790,AT1G17710,AT2G11810,AT1G08310,AT2G45130,AT3G22600,AT3G03540,AT2G04460,AT2G46880,AT3G05630,AT1G26390,AT4G31970,AT3G02040,AT2G38940,AT5G20410,AT5G20150,AT1G08650,AT5G02780,AT5G09530,AT3G43110,AT5G17340,AT5G05340,AT1G68620,AT1G67600,AT2G40750,AT3G17790,AT5G63130,AT4G34210,AT3G48850,AT1G13750,AT5G02200,AT1G74590,AT4G03960,AT2G46750,AT2G29470,AT4G37290,AT3G52820,AT1G23140,AT5G13320,AT1G02310,AT3G44510,AT1G26380,AT5G39720,AT4G14630,AT1G21310,AT1G68450,AT5G64000,AT3G04210,AT1G19200,AT4G18430,AT1G22170,AT2G35980,AT3G49160,AT5G43370,AT5G01220,AT5G60900,AT2G14610,AT5G50260,AT1G26410,AT3G01420,AT1G32350,AT5G01600,AT4G00500,AT2G45220,AT2G30750,AT2G17280,AT2G15120,AT2G32830,AT3G18000,AT1G70900,AT2G37890,AT2G14620,AT1G17745,AT1G72890,AT3G21500,AT5G22570,AT1G17180,AT3G56040,AT1G05000,AT1G69930,AT4G19810,AT3G12500,AT4G17615,AT2G26660,AT2G43535,AT3G03790,AT1G68740,AT2G36970,AT4G23000,AT1G74210,AT5G38900,AT3G11050,AT1G74010,AT2G04160,AT2G27190,AT4G33030,AT2G17500,AT3G52190,AT3G09270,AT1G53310,AT4G31240,AT4G18250,AT5G67340,AT3G20660,AT3G09010,AT1G21250,AT4G34200,AT2G26290,AT4G02050,AT2G43570,AT4G38320,AT3G56090,AT5G57610,AT3G08720,AT5G09570,AT2G42690,AT1G71130,AT2G40300,AT1G65500,AT3G13950,AT4G17790,AT5G03610,AT1G66480,AT3G07390,AT2G40710,AT3G59300,AT3G21560,AT4G28490,AT1G65690,AT1G27760,AT5G41040,AT5G51050,AT2G46440,AT3G03310,AT5G48370,AT5G44610,AT1G32940,AT1G68765,AT1G02360,AT3G53620,AT1G68650,AT1G08920,AT1G45145,AT2G19880,AT5G10740,AT4G02940,AT1G30500,AT1G68795,AT4G21470,AT5G44240,AT5G54510,AT3G57630,AT4G01480,AT1G77450,AT1G02850,AT3G14020,AT1G11330,AT5G17060,AT5G19430,AT5G67600,AT3G26690,AT5G53420,AT3G09560,AT1G74020,AT5G36940,AT4G22950,AT5G61510,AT4G28260,AT1G22410,AT4G18700,AT5G06860,AT1G02940,AT5G63680 MARCHIVE_1W_PNP-P-PNP+P_DN Down-regulated by pnp1-1 -P vs pnp1-1 +P in one week (Table S4 PubmedID:19710229) AT2G25200,AT1G20440,AT4G29780,AT2G38760,AT3G52070,AT4G37610,AT1G73680,AT1G15550,AT3G28220,AT1G65400,AT4G29740,AT5G47330,AT1G08830,AT2G36690,AT1G67330,AT1G12520,AT1G53870,AT2G29740,AT4G16370,AT5G04230,AT1G48300,AT3G55840,AT3G19550,AT5G11920,AT2G02850,AT3G56360,AT5G04950,AT1G22440,AT2G28190,AT1G22500,AT5G48430,AT4G36700,AT5G05250,AT1G73600,AT1G47400 RIDER_PKL_UP Up-regulated on exhibit PKL-dependent transcription based on the criteria (Pkl vs. Wt p < 0.05 ?? Upkl vs. Uwt p < 0.05) and for which the corresponding transcript level is elevated two-fold or more in pkl seeds in both the absence and presence of uniconazole-P. (Table S1a PubmedID:12834400) AT3G54180,AT4G23690,AT3G16430,AT4G33560,AT2G43480,AT2G05520,AT5G12030,AT1G75750,AT1G09460,AT4G16480,AT1G10370,AT2G43150,AT1G62480,AT3G16410,AT2G25450,AT3G46230,AT5G64120,AT1G13930,AT4G08685,AT2G37040,AT4G25900,AT1G65340,AT4G24130,AT2G39900,AT1G23750,AT4G15480,AT4G27140,AT2G29500,AT1G55020,AT4G17260,AT2G15830,AT3G16420,AT1G10970,AT4G31550,AT2G35810,AT2G04780,AT2G17320,AT2G30870,AT5G01600,AT1G26830,AT2G22080,AT2G22770,AT4G19810,AT1G62500,AT4G23420,AT2G35880,AT2G30520,AT3G23000,AT5G11260,AT1G03420,AT1G10550,AT2G16060,AT5G13930 RIDER_PKL_DN Down-regulated on exhibit PKL-dependent transcription based on the criteria (Pkl vs. Wt p < 0.05 ?? Upkl vs. Uwt p < 0.05) and for which the corresponding transcript level is not elevated two-fold or ore in pkl seeds in both the absence and presence of uniconazole-P. (Table S1b PubmedID:12834400) AT2G47650,AT1G54410,AT4G30270,AT2G07711,AT3G54420,AT1G74470,AT4G20860,AT1G42970,AT2G30570,AT5G51810,AT4G17190,AT1G09750,AT2G19590,AT4G37410,AT5G64100,AT2G47730,AT2G17720,AT5G02380,AT1G78570,AT1G18250,AT4G22010,AT2G46740,AT2G03750,AT5G57090,AT4G17670,AT3G55800,AT5G54740,AT2G39700,AT2G32560,AT1G30490,AT5G08640,AT1G78660,AT1G70710,AT1G48480,AT4G12880,AT2G25980,AT4G40060,AT4G14690,AT4G15160,AT1G14210,AT3G26650,AT3G27660,AT4G26130,AT1G05510,AT4G30996,AT2G33620,AT1G07890,AT2G38530,AT1G54010,AT1G75480,AT1G20620,AT4G12720,AT4G03190,AT2G22470,AT1G73190,AT2G42840,AT2G23910,AT4G38970,AT4G34590,AT4G37470,AT2G28200,AT5G64620,AT4G23710,AT4G16500,AT3G51670,AT3G16770,AT5G66400,AT1G53840,AT1G47670,AT2G06850,AT1G70370,AT2G25810,AT4G28750,AT4G31340,AT2G07000,AT5G13630,AT1G27680,AT3G13790,AT5G65360,AT4G21960,AT5G07440,AT4G27170,AT2G28790,AT1G04520,AT2G31360,AT1G78830,AT3G53610,AT2G45180,AT2G20930,AT4G37550,AT4G26650,AT2G31380,AT4G26910,AT2G29340,AT2G40300,AT3G52470,AT3G52500,AT2G20760,AT1G32200,AT1G54000,AT2G43590,AT1G55670,AT2G24290,AT4G23850,AT2G34470,AT5G44340,AT2G36290,AT2G27860,AT4G13930,AT4G19410,AT2G21620,AT2G26250,AT1G10180,AT5G08620,AT1G23860,AT3G57610,AT1G79530,AT5G07340,AT5G52470,AT4G37910,AT2G34750,AT2G37270,AT1G16270,AT4G02680,AT2G37490,AT1G15140,AT3G54110,AT2G15090,AT4G38580,AT4G16390,AT4G32300,AT4G02940,AT1G60140,AT4G02930,AT4G28520,AT1G75830,AT4G10450,AT4G32520,AT2G14880,AT3G58610,AT4G11240,AT4G21810,AT4G34740,AT1G23820,AT4G11840,AT1G21000,AT5G45350,AT5G11770,AT2G37690,AT1G49510,AT1G17020,AT4G13830,AT2G15690,AT1G49850,AT1G04550,AT1G15440,AT1G43170,AT3G01120,AT2G34930,AT3G47420,AT2G27050,AT4G33510,AT2G35040,AT4G04940,AT1G14920,AT2G47990,AT2G45240,AT4G13910,AT2G02810,AT2G32070,AT4G25620,AT1G78080,AT2G17760,AT4G22720,AT2G16570,AT1G20910,AT2G39020,AT4G27680,AT4G01410,AT4G14680,AT4G08950,AT1G62570,AT1G62180,AT4G25470,AT5G07360,AT3G25585,AT4G15390,AT4G25170,AT4G14130,AT1G22710,AT1G12110,AT4G33960,AT1G60190,AT5G59430,AT4G37580,AT5G16990,AT5G24150,AT4G04830,AT4G16370,AT2G15010,AT1G15110,AT4G08290,AT2G28420,AT1G54730,AT3G48130,AT1G27020,AT2G41260,AT2G15050,AT2G36970,AT1G64780,AT1G22690,AT4G11880,AT1G64900,AT1G32210,AT2G45490,AT2G31100,AT4G35030,AT4G01480,AT1G32060 RIDER_UNIUNICONAZOLE-P_DN Up-regulated on exhibit uniconazole-P-dependent based on the criteria (Pkl vs. Wt p < 0.05 ?? Upkl vs. Uwt p < 0.05) and for which the corresponding transcript level is elevated two-fold or more (Table S2 PubmedID:12834400) AT1G23130,AT2G31540,AT1G50420,AT2G37060,AT5G51810,AT4G25420,AT4G18690,AT5G07200,AT1G20890,AT4G35390 RIDER_UNIUNICONAZOLE-P_UP Down-regulated on exhibit uniconazole-P-dependent based on the criteria (Pkl vs. Wt p < 0.05 ?? Upkl vs. Uwt p < 0.05) and for which the corresponding transcript level is not elevated two-fold or more (Table S2 PubmedID:12834400) AT1G62500,AT1G15550,AT3G26570,AT3G51810,AT2G47770,AT1G48130,AT4G21960,AT1G11580,AT2G25980,AT5G40760,AT2G29660,AT2G36640,AT5G35630,AT1G54000,AT2G15400,AT1G28330,AT1G70370,AT3G17520,AT4G03280,AT4G33100,AT2G39730,AT2G14260,AT3G25860,AT2G47730,AT4G30950,AT2G38120,AT5G39580,AT2G14750,AT5G66040,AT5G15230,AT4G36880,AT3G08730,AT1G69530,AT3G52470,AT1G27150,AT4G01450,AT2G46650,AT2G17280,AT4G21560,AT5G17990,AT1G01580,AT4G34810,AT1G03870,AT1G23080,AT4G26790,AT2G44080,AT1G20440,AT1G65310,AT2G44220,AT3G02885,AT2G40000,AT4G02860,AT2G28830,AT3G57730,AT2G31100,AT4G35030,AT2G01840,AT2G04810 RIDER_UNIUNICONAZOLE-P_PKL_UP Up-regulated on exhibit uniconazole-P-dependent and PKL-dependent transcription based on the criteria Wt vs. Upkl p < 0.05 ?? Pkl vs. Upkl p < 0.05 ?? Uwt vs. Upkl p < 0.05) and for which the corresponding transcript level is elevated two-fold or more. (Table S3 PubmedID:12834400) AT1G64900,AT1G50420,AT4G36700,AT5G51810,AT4G25420,AT2G10010,AT2G19900,AT1G48130,AT3G51810,AT1G08630,AT4G18690,AT2G34700,AT1G62500,AT2G28490,AT5G51210,AT4G28520,AT1G67330,AT1G44575 RIDER_UNIUNICONAZOLE-P_PKL_DN Down-regulated on exhibit uniconazole-P-dependent and PKL-dependent transcription based on the criteria Wt vs. Upkl p < 0.05 ?? Pkl vs. Upkl p < 0.05 ?? Uwt vs. Upkl p < 0.05) and for which the corresponding transcript level is not elevated two-fold or more. (Table S3 PubmedID:12834400) AT4G15160,AT5G35630,AT2G03750,AT1G61800,AT1G73190,AT1G02920,AT5G20960,AT1G05510,AT4G21960,AT1G20620,AT3G27660,AT3G16460,AT2G28790,AT1G76090,AT2G35860,AT1G09750,AT5G64620,AT4G37550,AT5G40760,AT1G80340,AT1G28330,AT5G40420,AT1G62510,AT2G26640,AT4G26130,AT3G52500,AT4G37560,AT5G25900,AT2G17720,AT2G47730,AT2G29750,AT2G25980,AT1G01580,AT1G09460,AT1G74470,AT4G27140,AT1G54860,AT1G53840,AT2G45180,AT4G38430,AT5G11720,AT1G54000,AT5G66400,AT3G61440,AT1G70710,AT1G70370,AT1G78830,AT1G55670,AT2G21620,AT2G31380,AT2G26250,AT3G54110,AT2G37270,AT5G63980,AT1G21720,AT2G25110,AT2G01570,AT2G38120,AT4G36930,AT2G46230,AT3G05200,AT1G75830,AT4G34630,AT2G15090,AT1G69530,AT2G32040,AT4G08950 SCHMID_0-7D_COL_UP Induced genes overlap between top 500 genes ranked by change between day 0 and 7 in Col (Table S4 PubmedID:14573523) AT1G53160,AT1G69120,AT2G33810,AT5G44630,AT5G60910,AT4G14130,AT5G37300,AT3G54340,AT3G28500,AT4G19430,AT3G15270,AT5G44620,AT5G20240,AT5G47600,AT3G02310,AT5G61850,AT5G24860,AT4G31910,AT5G15800,AT3G20100,AT1G02190,AT5G65730,AT1G69180,AT2G45660,AT4G00870,AT2G03710,AT4G24150,AT4G34400,AT1G54020,AT3G14990,AT2G17280,AT5G15150,AT4G39480,AT1G03170,AT5G09300,AT1G35290,AT3G30775,AT1G24260,AT5G59220,AT1G01140,AT1G69600,AT2G01520,AT3G06160,AT1G26960,AT3G26590,AT4G25830,AT5G37260,AT4G14695,AT4G31610,AT1G72260,AT4G15480,AT5G35670,AT3G57920,AT3G02170,AT5G62165,AT2G31980,AT1G26310,AT1G01720,AT1G03710,AT2G16210,AT3G53310,AT4G23680,AT1G08630,AT4G18960,AT5G56300,AT1G69870,AT5G10300,AT2G43520,AT1G75170,AT5G22430,AT5G24780,AT5G15580,AT4G21590,AT5G37540,AT1G17745,AT2G34810,AT1G30950,AT2G42800,AT2G19800,AT1G55850,AT2G40100,AT2G35820,AT5G24910,AT1G01120,AT3G19180,AT1G07260,AT5G08640,AT1G22160,AT3G16150,AT3G12460,AT3G58770,AT2G03550,AT3G06220,AT2G20870,AT4G07670,AT5G64990,AT4G11310,AT5G43270,AT4G33790,AT2G39330,AT4G16690 SCHMID_0-7D_COL_DN Repressed genes overlap between top 500 genes ranked by change between day 0 and 7 in Col (Table S4 PubmedID:14573523) AT3G19710,AT5G23010,AT1G49320,AT3G45160,AT3G58990,AT1G56300,AT3G25190,AT4G12030,AT5G59330,AT3G22740,AT5G07690,AT2G43100,AT4G13770,AT5G64110,AT1G11080,AT1G65860,AT3G23430,AT3G09260,AT3G03190,AT5G09220,AT4G01430,AT1G44800,AT1G62560,AT1G76800,AT3G49620,AT1G49470,AT2G14580,AT2G28780,AT1G47400,AT1G62800,AT1G74090,AT1G16410,AT5G60780,AT3G01500,AT5G61660,AT1G07610,AT3G05730,AT5G62150,AT4G08290,AT2G18570,AT5G43180,AT1G01070,AT3G54420,AT3G25760,AT5G05960,AT1G80830,AT1G59740,AT1G18880,AT4G37970,AT1G02400,AT1G47485,AT3G56240,AT1G80760,AT3G46130,AT2G37460,AT4G08300,AT3G05640,AT1G21140,AT1G01470,AT5G14740,AT1G13930,AT4G34950,AT5G43580,AT1G33440,AT5G49630,AT4G01720,AT5G38320,AT1G20070,AT2G42540,AT5G40780,AT2G34700,AT3G06490,AT1G73600,AT2G18300,AT5G05250,AT3G26960,AT4G39940,AT4G31330,AT2G38940,AT2G47180,AT1G06120,AT1G49310,AT1G18590,AT2G02010,AT2G30080,AT5G61420,AT5G50200,AT2G13360,AT5G07460,AT2G37180,AT2G32860,AT3G13790,AT3G14560,AT2G46650,AT5G04950,AT4G30140,AT2G39310,AT2G40900,AT5G38930,AT4G00880,AT5G14940,AT1G70410,AT2G46690,AT3G11280,AT3G16460,AT3G22231,AT1G56430,AT5G10180,AT4G32650,AT2G38600,AT2G46790,AT3G10120,AT5G05790,AT1G05300,AT2G33830,AT2G30540,AT1G20850,AT4G30650,AT1G67870,AT1G29660,AT1G24575,AT1G19960,AT5G20820,AT3G30340,AT3G26770,AT3G15840,AT5G26340,AT3G61380,AT1G06830,AT1G71030,AT5G59780,AT5G44480,AT1G62290,AT4G25100,AT3G57260,AT1G37130,AT4G10500,AT4G17090,AT4G04830,AT5G63850,AT4G23010,AT1G28710,AT1G29280,AT5G50120,AT3G47510,AT3G60520,AT5G10030,AT3G30530,AT2G39350,AT5G20960,AT4G09890,AT5G53320,AT4G18280,AT3G29590,AT4G26150,AT5G01870,AT4G00780,AT1G73630,AT1G73260,AT1G31180,AT4G33550,AT3G63160,AT2G23840,AT1G35190,AT4G22950,AT4G20460,AT4G14040,AT2G31790,AT3G27200,AT2G38530,AT4G19810,AT2G14750,AT3G01840,AT5G65210,AT3G52720,AT3G19270,AT5G17220,AT4G31730,AT2G30670,AT1G61660,AT1G15960,AT4G04610,AT5G19875,AT2G38870,AT2G39850,AT2G24762,AT5G54060,AT1G44100,AT3G11660,AT1G20440,AT1G70810,AT5G38780,AT5G24660,AT3G08040,AT4G19840,AT3G53100,AT5G38710,AT1G09155,AT5G44400,AT3G61880,AT3G62740,AT1G69530,AT2G43010,AT1G23800,AT1G65500,AT3G43430,AT5G27350,AT4G18640,AT5G42650,AT2G28550,AT5G57350,AT1G03495,AT3G62040,AT1G14700,AT2G29670,AT3G29030,AT1G62570,AT3G12890,AT1G68150,AT1G67865,AT1G04040,AT3G01350,AT4G39770,AT3G21270,AT3G20370,AT1G29395,AT5G22270,AT4G27830,AT5G63180,AT2G14610,AT2G21890 LUKOWITZ_WT_YDA-2_UP Up-regulated gene Expression in Wild-type and yda-2 (Table S2 PubmedID:14718171) AT2G37770,AT5G57550,AT1G30700,AT3G27660,AT2G37760,AT1G24260,AT4G11650,AT2G43570,AT4G37520,AT4G15760,AT4G24040,AT2G45220 LUKOWITZ_WT_YDA-2_DN Down-regulated gene Expression in Wild-type and yda-2 (Table S2 PubmedID:14718171) AT5G13930,AT1G12080 BROUN_35S-WIN1/CONTROL_UP Up-regulated relative expression of genes involved in lipid metabolism in 35S:WIN1 and control lines (Table 2 PubmedID:15070782) AT1G02205,AT2G41540,AT2G04570,AT2G38110,AT4G24510,AT1G01120,AT4G14440 BROUN_35S-WIN1/CONTROL_DN Down-regulated relative expression of genes involved in lipid metabolism in 35S:WIN1 and control lines (Table 2 PubmedID:15070782) AT2G15090 TAI_TSA_UP Up-regulated by TSA (Table 2 PubmedID:16307366) AT5G52300,AT5G66400,AT3G17520,AT3G51810,AT1G52690,AT3G15670,AT2G47770,AT3G50970,AT1G73190,AT5G06760,AT1G05340,AT4G28520,AT3G50980,AT3G12580,AT2G31980,AT2G40610,AT2G19900,AT4G02280,AT2G33830,AT4G08950,AT4G25170,AT2G17230,AT2G39980,AT4G36040,AT4G20070,AT1G54100,AT4G21680,AT4G18210,AT4G36010,AT1G61890,AT2G47180,AT4G37430,AT3G51860,AT2G28470,AT4G39400,AT4G22920,AT1G09970,AT4G34590,AT1G22710,AT5G57050,AT4G13830,AT4G39090 TAI_TSA_DN Down-regulated by TSA (Table 3 PubmedID:16307366) AT1G52070,AT2G20520,AT4G12480,AT1G30870,AT5G64100,AT4G00680,AT2G16060,AT5G44110,AT2G17850,AT4G22080,AT4G22090,AT2G46860,AT2G19590,AT4G33560,AT4G01480,AT4G25790,AT5G19790,AT5G19780,AT1G62440,AT1G75750,AT2G25060,AT2G41970,AT4G25220,AT1G59960,AT3G01390,AT2G34080,AT2G23630,AT1G55020,AT2G46490 RONEMUS_AGO1-9_21D_1.5X_UP Up-regulated by ago1-9 21d 1.5X (ANOVA 0.01) (Table S4 PubmedID:16798886) AT2G14610,AT1G30760,AT4G24000,AT4G16260,AT1G72830,AT1G78960,AT4G15390,AT5G02200,AT4G33720,AT1G27370,AT3G21510,AT5G19890,AT3G12500,AT4G36430,AT3G04720,AT1G19140,AT2G29350,AT4G11650,AT2G43510,AT3G28930,AT3G57260,AT3G21770,AT5G25890,AT3G49120,AT2G38870,AT1G02810,AT1G02930,AT5G17330,AT4G04830,AT3G48100,AT4G39090,AT5G67300,AT5G43780,AT4G23690,AT2G18150,AT2G30870,AT2G38860,AT4G37870,AT2G38390,AT1G51760,AT5G15500,AT5G08640,AT2G14560,AT3G54640,AT4G26060,AT5G22310,AT5G47910,AT2G22840,AT4G24350,AT3G32980,AT2G31390,AT2G38380,AT2G43530,AT1G14950,AT4G01610,AT3G50970,AT5G63850,AT2G02120,AT4G34200,AT5G13930,AT5G39950,AT3G48230,AT5G58670,AT5G43270,AT4G35620,AT1G35720,AT4G34230,AT3G27300,AT1G11670,AT1G55020,AT2G40100,AT4G12280,AT5G12140,AT3G48750,AT5G01600,AT5G47220,AT4G11830,AT3G16410,AT5G40760,AT1G78570,AT4G38530,AT3G51240,AT4G00600,AT2G47470,AT5G66760,AT4G34050,AT4G39980,AT2G47650,AT2G32520,AT3G02780,AT1G43160,AT2G06050,AT2G03120,AT1G21750,AT2G22250,AT4G18930,AT1G66410,AT4G19640,AT5G61210,AT3G62830,AT5G15650,AT2G44350,AT2G39780,AT4G24920,AT4G37410,AT1G56340,AT2G41100,AT1G09780,AT1G72910,AT3G47520,AT1G78660,AT2G33470,AT4G02620,AT2G05840,AT1G50480,AT1G11840,AT1G20050,AT1G48030,AT2G31570,AT1G09330,AT3G09390,AT1G12920,AT4G30960,AT5G08300,AT1G70310,AT2G36530,AT2G41410,AT2G38800,AT4G11010,AT3G61440,AT4G00860,AT2G44060,AT5G28540,AT1G04750,AT2G24940,AT4G04470,AT2G04900,AT2G36580,AT1G10590,AT5G50850,AT5G05000,AT1G13000,AT4G24430,AT2G23080,AT2G42790,AT5G56010,AT4G23630,AT2G21250,AT1G75330,AT4G15790,AT2G27730,AT4G19200,AT2G04410,AT1G53910,AT2G31670,AT5G65670,AT4G33090,AT5G61790,AT4G32210,AT4G34720,AT1G50430,AT4G20150,AT1G72330,AT4G32470,AT4G30010,AT1G54580,AT2G33110,AT1G79020,AT1G68560,AT2G05710,AT2G37560,AT2G20820,AT3G44110,AT2G41530,AT2G23600,AT1G29310,AT2G20420,AT5G42980,AT2G16600,AT5G54810,AT4G26080 RONEMUS_AGO1-9_21D_1.5X_DN Down-regulated by ago1-9 21d 1.5X (ANOVA 0.01) (Table S4 PubmedID:16798886) AT2G33420,AT3G04550,AT4G32260,AT3G47380,AT5G20630,AT4G12800,AT2G21330,AT1G22610,AT2G06520,AT1G56410,AT1G76100,AT1G10960,AT2G06850,AT4G37990,AT3G11630,AT2G37220,AT4G24250,AT4G27440,AT3G26520,AT2G02130,AT1G61520,AT4G10340,AT1G50250,AT5G35630,AT1G42970,AT1G12410,AT5G58950,AT1G79860,AT2G43020,AT4G31560,AT1G20700,AT2G20860,AT1G67740,AT3G61470,AT2G20920,AT1G07320,AT3G29670,AT2G43560,AT4G01150,AT1G30380,AT1G54040,AT1G24260,AT4G03280,AT4G28750,AT2G26080,AT4G32940,AT1G71695,AT3G50820,AT1G52230,AT4G17600,AT2G30570,AT1G06680,AT4G24770,AT2G39010,AT1G70410,AT1G21000,AT1G50260,AT1G70940,AT5G01530,AT2G47930,AT5G55850,AT5G05690,AT3G57130,AT1G72610,AT1G48410,AT2G13360,AT3G61580,AT3G02730,AT3G16140,AT1G64720,AT2G43540,AT2G21620,AT4G37760,AT1G74470,AT4G17090,AT1G20010,AT5G13630,AT5G16400,AT3G54890,AT4G14860,AT4G38970,AT4G22890,AT1G51400,AT5G59030,AT2G46820,AT4G01040,AT1G15820,AT2G38210,AT1G49470,AT5G14740,AT5G09660,AT2G05100,AT3G27925,AT1G19150,AT4G02770,AT5G35100,AT4G23400,AT4G32340,AT5G57530,AT3G21620,AT2G20260,AT1G22690,AT5G54270,AT4G27600,AT4G21280,AT3G56940,AT2G42840,AT5G60580,AT1G23080,AT1G68010,AT5G64040,AT4G37300,AT2G01110,AT4G27520,AT4G35250,AT5G37770,AT3G48360,AT1G09750,AT5G15850,AT1G75750,AT3G46780,AT1G03140,AT5G09220,AT1G69530,AT2G32100,AT4G15760,AT2G45470,AT3G16370,AT2G36800,AT3G45780,AT2G21140,AT4G29020,AT4G19170,AT4G18970,AT2G40610,AT3G27690,AT1G71030,AT2G43010,AT2G20870,AT2G44120 RONEMUS_DCL1-9_1.5X_21D_UP Up-regulated dcl1-9 1.5X 21d (ANOVA 0.01) (Table S4 PubmedID:16798886) AT4G33720,AT5G64100,AT4G12550,AT1G66270,AT4G14630,AT5G63850,AT1G54000,AT1G62670,AT2G44790,AT3G22880,AT4G30170,AT4G15390,AT5G43350,AT1G12530,AT3G16430,AT3G12500,AT5G42650,AT5G19890,AT2G28190,AT3G21510,AT4G04830,AT4G39090,AT1G03230,AT2G22840,AT5G08640,AT1G11670,AT3G51240,AT5G13930,AT3G21770,AT1G78850,AT3G49120,AT5G48880,AT4G27560,AT2G33850,AT1G55020,AT4G14430,AT3G55120,AT4G31730,AT4G11320,AT4G21910,AT4G12510,AT2G47180,AT2G40330,AT3G50970,AT4G27280,AT1G14950,AT3G48100,AT2G04780,AT1G78860,AT5G17330,AT2G34710,AT4G37410,AT2G38530,AT3G16470,AT5G01600,AT5G43190,AT4G12280,AT3G16410,AT2G45290,AT1G79530,AT3G21490,AT4G25630,AT3G13790,AT5G51890,AT4G33220,AT5G26030,AT1G78820,AT3G32980,AT5G43780,AT4G36990,AT1G19140,AT2G24550,AT2G31390,AT1G09740,AT1G78830,AT4G20380,AT1G10370,AT1G11840,AT3G16050,AT1G65360,AT2G01140,AT2G47890,AT5G40760,AT1G56410,AT1G19670,AT4G36250,AT2G33860,AT5G25610,AT5G20830,AT5G65980,AT3G23990,AT4G27440,AT4G35300,AT2G42530,AT1G78570,AT4G37870,AT5G54160,AT1G03220,AT2G36290,AT2G03760,AT4G39330,AT4G16500,AT1G02500,AT5G52510,AT3G48230,AT4G23630,AT4G15910,AT2G23290,AT4G01480,AT5G49600,AT1G62180,AT4G02500,AT3G54820,AT4G39730,AT4G21960,AT5G39950,AT4G24190,AT1G35720,AT2G44310,AT2G32520,AT5G66760,AT1G10940,AT2G47730,AT1G22360,AT2G47650,AT1G53910,AT2G43020,AT1G68560,AT5G65670,AT3G27300,AT4G39980,AT1G78920,AT1G79020,AT3G45590,AT2G27510,AT1G43160 RONEMUS_DCL1-9_1.5X_21D_DN Down-regulated dcl1-9 1.5X 21d (ANOVA 0.01) (Table S4 PubmedID:16798886) AT1G11260,AT5G35100,AT4G17560,AT2G25080,AT1G11530,AT5G19220,AT4G17090,AT3G15450,AT2G21620,AT4G35250,AT1G03140,AT2G47930,AT4G19160,AT1G01620,AT1G54520,AT5G16400,AT4G36530,AT2G20670,AT3G28930,AT1G54740,AT4G13830,AT4G27030,AT2G39570,AT4G27450,AT2G18700,AT1G62510,AT3G47340,AT1G65480 RONEMUS_AGO1_9-D_MPSS_UP Up-regulated in ago1 at 9 d with Matches in the MPSS Database (Table 1 PubmedID:16798886) AT1G72830,AT2G02850,AT4G15440,AT1G62670,AT4G13930,AT4G10890,AT1G26880,AT4G36360,AT4G18730,AT4G26230,AT2G44050,AT3G52500,AT4G24770,AT2G13820,AT1G54040,AT3G48720,AT1G11860,AT4G34670,AT3G58610,AT1G20840,AT4G02500,AT3G62980,AT1G48410,AT1G76100 MITSUDA_35S-NST1_UP Up-regulated genes in 35S:NST1 plants and overlapped with gene groups listed in Table 1 (Table S2 PubmedID:16214898) AT2G46680,AT1G29395,AT1G75750,AT1G76180,AT1G76930,AT2G05520,AT2G33380,AT2G39800,AT4G23600,AT5G25610,AT5G52300,AT5G59310,AT5G59320,AT4G39090,AT1G19660,AT2G24850,AT2G38870,AT3G21240,AT5G14780,AT5G20230,AT5G50200,AT1G27730,AT2G17840,AT5G58670,AT5G15970,AT5G43170,AT3G05880,AT4G02380,AT1G68850,AT1G75280,AT2G37130,AT3G49120,AT4G11600,AT4G33420,AT4G37520,AT4G37530,AT5G05340,AT5G17000,AT5G39580,AT5G42180,AT5G64120,AT4G18780,AT5G17420,AT5G44030,AT1G09500,AT1G72680,AT4G34230,AT5G54160,AT2G44745,AT4G28500,AT1G17950,AT3G46130,AT5G12870,AT1G03920,AT1G08340,AT1G19300,AT1G21140,AT1G27380,AT1G27440,AT1G33800,AT1G49470,AT2G03200,AT2G04850,AT2G27690,AT2G28760,AT2G30750,AT2G36120,AT2G38080,AT2G39210,AT2G43510,AT2G45220,AT3G05640,AT3G10340,AT3G15050,AT3G16920,AT3G18660,AT3G50220,AT3G54420,AT3G62020,AT4G01430,AT4G01700,AT4G17220,AT4G21620,AT4G24120,AT4G35110,AT4G35770,AT4G39670,AT5G03170,AT5G03260,AT5G06930,AT5G07460,AT5G15630,AT5G25930,AT5G44580,AT5G52390,AT5G54690,AT5G58350,AT5G59290,AT5G62680,AT1G02220,AT1G69490,AT2G43000,AT5G67300,AT1G73800,AT1G05710,AT3G07340,AT5G48560,AT1G21910,AT4G17500,AT5G25190,AT5G47220,AT5G51190,AT1G07610,AT1G10550,AT1G17380,AT1G21390,AT1G32170,AT1G35230,AT1G43910,AT1G52200,AT1G52560,AT1G55910,AT1G58420,AT1G65860,AT1G67360,AT1G68690,AT1G72900,AT1G76690,AT2G20145,AT2G24550,AT2G27080,AT2G28400,AT2G31880,AT2G39660,AT2G43570,AT2G44500,AT3G05200,AT3G07700,AT3G19010,AT3G26210,AT3G28270,AT3G50930,AT3G57240,AT4G04610,AT4G08290,AT4G08300,AT4G10390,AT4G15530,AT4G17340,AT4G17840,AT4G20110,AT4G20860,AT4G21760,AT4G23150,AT4G24380,AT4G25810,AT4G30270,AT4G33050,AT5G18470,AT5G26340,AT5G35735,AT5G37540,AT5G38900,AT5G39670,AT5G44390,AT5G50800,AT5G52760,AT5G53030,AT5G53370,AT5G58570,AT2G01850,AT2G28110,AT3G03650,AT4G30280,AT4G33330,AT5G33290,AT5G48070,AT5G57550,AT1G20510,AT1G80830,AT3G21230,AT3G48990,AT4G26220,AT4G34050,AT1G02850,AT1G61810,AT1G72990,AT2G27500,AT2G43620,AT3G12500,AT3G13790,AT3G57260,AT4G15210,AT4G16260,AT4G39000,AT5G07830,AT5G20250,AT5G49360,AT5G56870,AT5G63800,AT4G36430,AT5G61370 MITSUDA_NST1-1-NST3-1/WT_DN Down-regulated in an nst1-1 nst3-1 plant, compared to a wild-type control (Table S1 PubmedID:16214898) AT2G27740,AT4G10840,AT5G52780,AT1G52140,AT4G35480,AT5G57800,AT1G23310,AT1G30280,AT1G76100,AT3G15630,AT3G54050,AT5G20580,AT2G40120,AT3G29360,AT5G39760,AT2G22850,AT3G10060,AT4G24110,AT4G33010,AT5G04140,AT5G11410,AT5G20630,AT1G72180,AT2G26500,AT2G36320,AT1G10960,AT3G54890,AT4G28270,AT5G11960,AT1G20020,AT1G63310,AT3G23050,AT4G32260,AT1G19835,AT1G49130,AT2G18160,AT2G37750,AT4G36000,AT5G49460,AT1G16880,AT1G25230,AT1G56010,AT2G29310,AT2G37460,AT2G38230,AT3G53800,AT4G39980,AT1G54740,AT3G15220,AT4G29950,AT4G33480,AT5G26000,AT5G49720,AT1G10360,AT1G50010,AT5G13090,AT3G02470,AT1G03920,AT1G07280,AT1G75090,AT1G74410,AT2G40400,AT1G27370,AT1G75750,AT2G22250,AT2G39850,AT3G14420,AT2G41770,AT3G56740,AT5G23580,AT1G12900,AT1G51400,AT1G67870,AT3G49840,AT3G49940,AT5G64040,AT1G06680,AT3G30530,AT1G08790,AT4G01070,AT5G50360,AT1G79130,AT5G60500,AT1G33811,AT1G64720,AT1G75380,AT1G76410,AT3G14760,AT3G55800,AT4G09650,AT4G18740,AT4G35350,AT1G19150,AT2G13360,AT2G43050,AT3G19550,AT5G12250,AT4G21445,AT4G39610,AT5G19220,AT4G14550,AT1G79110,AT1G48320,AT2G32720,AT5G01830,AT2G37170,AT3G30775,AT3G63140,AT4G30993,AT3G53420,AT4G30270,AT5G04330,AT4G37730,AT1G76080,AT2G28470,AT3G06350,AT3G46130,AT5G13730,AT5G56870,AT1G55670,AT1G68670,AT4G34610,AT4G37930,AT5G65070,AT1G70300,AT3G61880,AT1G30380,AT1G76560,AT2G20780,AT3G44720,AT1G33430,AT1G60950,AT3G43960,AT4G36540,AT5G54585,AT3G14780,AT1G68360,AT1G74890,AT3G03773,AT4G28080,AT5G57655,AT1G23190,AT1G70430,AT3G02040,AT4G14760,AT5G13820,AT5G67230,AT1G20340,AT2G46710,AT3G56130,AT3G59970,AT1G54780,AT4G18550,AT4G33450,AT1G23760,AT1G48850,AT2G38360,AT1G20070,AT3G26650,AT5G65210,AT5G03670,AT5G42530,AT1G32060,AT1G75460,AT3G61160,AT3G63160,AT1G70820,AT1G78090,AT1G24120,AT1G68440,AT5G11590,AT3G59690,AT1G17090,AT3G48550,AT3G52370,AT5G54570,AT2G21180,AT1G11860,AT1G13700,AT5G15490,AT3G29200,AT1G05170,AT1G42970,AT5G03300,AT5G23920,AT5G02160,AT2G35060,AT5G11950,AT5G14880,AT5G49360,AT2G17450,AT1G15800,AT5G53460,AT1G32080,AT4G21280,AT5G66330,AT1G63180,AT4G01430,AT5G49730,AT2G40470,AT3G62410,AT1G63120,AT5G60490,AT1G32930,AT3G56240,AT2G42540,AT3G51080,AT1G17710,AT2G04850,AT3G55910,AT4G13940,AT4G17220,AT1G67050,AT5G15740,AT1G68200,AT4G30490,AT3G03650,AT5G20250,AT3G57420,AT1G14150,AT5G27350,AT5G62180,AT5G06930,AT4G34470,AT1G09340,AT3G03210,AT2G03450,AT2G22990,AT3G01810,AT5G67210,AT5G47870,AT1G62540,AT2G28780,AT2G02130,AT2G26690,AT3G12960,AT1G19940,AT1G52910,AT1G69760,AT3G61760,AT1G08630,AT4G04460,AT1G64060,AT3G58600,AT1G12780,AT3G48420,AT2G04032,AT3G11930,AT3G16250,AT2G43340,AT5G14470,AT1G73410,AT3G06500,AT3G44220,AT3G49930,AT5G61340,AT2G23760,AT1G75690,AT3G46780,AT5G24800,AT3G63280,AT5G45970,AT1G72990,AT2G31560,AT2G38400,AT5G42760,AT5G22630,AT5G25160,AT1G53660,AT3G53620,AT5G05390,AT1G60810,AT2G31390,AT2G47750,AT4G26540,AT5G45290,AT1G26450,AT5G43070,AT1G27210,AT4G23690,AT2G35860,AT1G53100,AT3G10320,AT5G39785,AT1G79420,AT1G43800,AT1G50590,AT3G55890,AT5G37260,AT3G14720,AT1G32100,AT1G54790,AT2G38170,AT5G38430,AT1G67590,AT1G19050,AT5G45100,AT5G24760,AT4G37240,AT1G17620,AT1G62990,AT3G62020,AT4G32010,AT4G12430,AT5G50080,AT3G45870,AT2G22980,AT1G26810,AT4G08930,AT4G25620,AT2G30550,AT3G21190,AT1G24030,AT1G15690,AT5G50370,AT2G45750,AT5G62580,AT1G01430,AT2G39730,AT1G23390,AT3G15040,AT1G29500,AT1G33800,AT5G13180,AT1G19530,AT5G62920,AT3G23090,AT1G80120,AT3G42950,AT3G19450,AT4G36010,AT1G76690,AT2G23540,AT3G61910,AT3G51300,AT1G22410,AT1G55810,AT1G16510,AT1G32450,AT3G29630,AT4G26320,AT1G76250,AT1G32740,AT1G19170,AT3G11030,AT2G21650,AT3G50820,AT2G26800,AT3G51860,AT1G32170,AT2G20680,AT5G38900,AT3G55990,AT1G80730,AT1G69790,AT1G70420,AT4G13930,AT4G16563,AT3G21240,AT1G02640,AT5G22940,AT5G59670,AT5G60020,AT4G34230,AT2G28315,AT4G03175,AT5G59290,AT1G35250,AT4G03180,AT5G62150,AT3G50220,AT1G79410,AT4G33330,AT2G42760,AT4G22680,AT1G30900,AT3G10910,AT1G72220,AT3G03150,AT1G66230,AT1G11740,AT5G22200,AT1G68725,AT1G32770,AT2G45220,AT5G47340,AT5G54240,AT1G79620,AT5G35740,AT1G76620,AT4G34540,AT1G21890,AT3G48100,AT5G38420,AT3G06420,AT5G46340,AT5G03760,AT5G48930,AT3G11980,AT3G53260,AT3G11180,AT1G72610,AT5G58580,AT2G28755,AT5G03260,AT3G45730,AT5G12870,AT2G18300,AT3G28270,AT2G28760,AT1G19540,AT1G27380,AT2G39110,AT5G15630,AT1G72200,AT1G67070,AT5G14740,AT1G27920,AT1G19300,AT1G51680,AT1G57750,AT2G34150,AT2G40890,AT3G49260,AT3G54040,AT1G35910,AT3G27960,AT1G29200,AT5G55970,AT1G66810,AT1G16490,AT3G56170,AT1G09440,AT1G17960,AT5G47330,AT2G40320,AT1G28470,AT5G58910,AT1G27440,AT4G36220,AT2G03200,AT2G28110,AT1G79180,AT2G38080,AT4G26580,AT1G56720,AT5G54690,AT1G08340,AT3G21230,AT3G18660,AT3G23810,AT1G53480,AT4G28500,AT3G10340,AT1G09610,AT1G63910,AT3G56230,AT1G17950,AT4G18780,AT4G26530,AT3G62730,AT3G15050,AT5G17420,AT3G01500 WALLEY_5MIN_WOUNDING_UP Up-regulated Genes by 5 min wounding (Table S1 PubmedID:17953483) AT1G74930,AT4G25470,AT1G27730,AT5G59820,AT1G76650,AT3G44260,AT1G73540,AT5G17350,AT3G61190,AT1G18300,AT5G22250,AT3G04640,AT5G54490,AT2G44840,AT5G62360,AT4G25480,AT1G32920,AT3G46620,AT4G27280,AT1G56300,AT2G15890,AT3G56880,AT1G76600,AT1G35210,AT2G33830,AT3G62550,AT5G61600,AT1G74440,AT3G50800,AT5G47230,AT1G29920,AT1G29910,AT3G47160,AT5G45340,AT2G40000,AT1G15010,AT5G63130,AT1G15820,AT4G29780,AT1G72920,AT1G28370,AT1G22250,AT4G17500,AT1G79040,AT4G27440,AT4G24570,AT1G73500,AT4G04330,AT1G19380,AT3G56710,AT2G22500,AT4G11280,AT5G10695,AT1G23710,AT5G47240,AT5G06690,AT2G30020,AT4G30650,AT4G25490,AT2G39920,AT2G31360,AT4G30660,AT3G61060,AT3G52400,AT1G75380,AT1G30380,AT1G72910,AT2G41430,AT3G09870,AT1G74450,AT5G20230,AT3G15210,AT1G22070,AT1G12610,AT2G15090,AT2G15960,AT3G26740,AT2G27830,AT3G50500,AT2G42530,AT4G11090,AT2G41100,AT1G33970,AT5G04340,AT5G06320,AT1G19310,AT5G35735,AT5G67480,AT1G58420,AT4G14270,AT3G15630,AT4G16146,AT5G66880,AT2G34420,AT4G26670,AT5G45750,AT3G01310,AT4G37920,AT3G45640,AT4G01130,AT2G28900,AT2G42040,AT2G27080,AT3G53990,AT3G46970,AT1G06080,AT3G57450,AT1G62430,AT1G72940,AT1G70420,AT1G30210,AT1G29670,AT1G21130,AT1G68840,AT4G18200,AT5G43170,AT2G28400,AT3G23910,AT3G16720,AT1G01240,AT5G22920,AT5G12940,AT1G66090,AT1G52200,AT5G42050,AT3G19580,AT4G35770,AT5G28630,AT3G23170,AT1G19020,AT2G39900,AT3G27140,AT1G52890,AT5G62350,AT5G65390,AT3G57530,AT5G27380,AT3G29320,AT1G25560,AT5G25210,AT2G23010,AT5G51190,AT1G19180,AT1G11210,AT5G47220,AT3G54190,AT2G30990,AT3G27210,AT1G33760,NP162702,AT5G20960,AT1G53350,AT1G26660,AT5G46680,AT1G80840,AT5G40270,AT2G28290,AT3G26020,AT3G10930,AT5G21960,AT1G74280,AT4G01360 WALLEY_5MIN_WOUNDING_DN Down-regulated Genes by 5 min wounding (Table S1 PubmedID:17953483) AT2G27395,AT2G27420,AT4G14690,AT1G02820,AT1G64780,AT1G32900,AT1G01060,AT5G13930,AT1G64500,AT2G47440,AT3G08730,AT3G51240,AT2G37180,AT3G17609,AT4G37320,AT3G16910,AT3G13570,AT1G17100,AT5G14760,AT4G35090,AT2G47180,AT3G48460,AT5G54120,AT1G06000,AT4G38430,AT3G56290,AT5G53370,AT5G63530,AT5G17300,AT5G08640,AT5G54130,AT3G21150,AT1G07010,AT5G26742,AT4G32770,AT3G52370,AT3G27170,AT3G22550,AT3G22890,AT4G01080,AT5G54060,AT5G13170,AT5G24990 KONDOU_COL.-0_RGE1-1_12DAF_DN Down-regulated in silique of Col.-0 and rge1-1 at 12 DAF (Table S1 PubmedID:18567831) AT3G06890,AT4G38000,AT1G71250,AT3G52970,AT5G03820,AT4G33600 YOUICHI_6T_HIGH-ACCUMULATION-PIGMENT_UP Increased expression levels in 6 transformants with high accumulation of pigments (Table S1 PubmedID:18980645) AT5G42800,AT5G54060,AT5G17220,AT2G46830,AT4G22870,AT1G10070,AT3G12320,AT5G13930,AT1G32900,AT5G17050,AT1G80130,AT5G06980,AT1G67360,AT5G43150 FAUTEUX_SILICON_INFECTED-ERYSIPHE-CICHORACEARUM_UP Up-regulated (1.5-fold change, p = 0.01) by silicon supply in Arabidopsis plants infected with Erysiphe cichoracearum (Table S1 PubmedID:17082308) AT5G38420,AT5G38430,AT5G54270,AT5G26000,AT4G21280,AT1G15820,AT3G05730,AT1G12900,AT3G27690,AT5G38410,AT4G26530,AT5G21430,AT1G72610,AT1G11860,AT3G01500,AT1G09340,AT3G63140,AT3G48420,AT3G16250,AT1G44575,AT4G18480,AT2G40100,AT5G05250,AT5G05580,AT5G22380,AT5G14740,AT3G56980,AT3G46780,AT5G49730,AT5G67370,AT1G42970,AT3G54050,AT1G32470,AT1G23740,AT4G28660,AT3G10720,AT4G37930,AT3G11630,AT4G39710,AT4G09010,AT4G01150,AT2G36145,AT1G33811,AT3G54890,AT5G06290,AT1G62190,AT5G23120,AT4G38970,AT3G47470,AT1G74470,AT1G68010,AT5G54190,AT4G10340,AT3G48280,AT4G28750,AT5G42070,AT1G58520,AT5G35630,AT1G68570,AT1G32080,AT4G25050,AT1G29920,AT3G15570,AT2G39730,AT1G05190,AT1G17710,AT1G73600,AT3G50685,AT1G76100,AT1G55370,AT1G64680,AT2G35370,AT3G18000,AT2G35260,AT5G19940,AT1G35420,AT2G29290,AT4G33010,AT2G34420,AT5G65220,AT1G16080,AT1G61520,AT5G50250,AT3G14415,AT2G27680,AT1G06680,AT3G61080,AT5G17670,AT1G78510,AT2G21330,AT4G13670 FAUTEUX_SILICON_INFECTED-ERYSIPHE-CICHORACEARUM_DN Down-regulated (1.5-fold change, p = 0.01) by silicon supply in Arabidopsis plants infected with Erysiphe cichoracearum (Table S1 PubmedID:17082308) AT1G80510,AT1G49230,AT1G77960,AT3G09220,AT5G01150,AT3G52520,AT4G05430,AT1G60730,BP586197,AV803469,AT3G18250,AT4G10860,AT1G61820,AT1G33960,ATMG00580,AT5G13830,AV815492,AT1G24807,AT3G55790,BP617335,AT4G29100,AT5G41890,AT5G09640,AT5G38550,AV545082,AT3G14770,AT2G07751,AT2G02515,AT5G16770,AT2G07671,AT2G17705,AT5G61730,TC262278 GOERES_5FC_TDT-1MUTANT_UP Increased RNA level genes with at least a 5-fold in tdt-1 mutants (Table S1 PubmedID:17513503) AT5G50600,AT3G49160,AT1G28030,AT1G20120,AT5G11920,AT4G15210,AT1G22210,AT1G56600,AT2G47180,AT3G19270,AT5G04380,AT3G05640,AT1G21550,AT2G31082,AT5G59220,AT5G24080,AT4G10250,AT2G33380,AT1G12010,AT2G42540,AT5G14920,AT2G22860,AT3G09640,AT5G58400,AT1G68850,AT4G23170,AT5G66400,AT5G13580,AT3G55090,AT5G59310,AT2G37870,AT4G33550,AT5G01870,AT2G41260,AT1G52690,AT2G42560,AT1G04560,AT4G36600,AT5G06760,AT5G44310,AT2G40340,AT3G63350,AT2G24740,AT4G25530,AT3G24500,AT3G01600,AT2G2615,AT1G71000,AT5G48570,AT5G12030,AT2G32120,AT1G52560,AT1G53540,AT1G54050,AT1G59860,AT3G46230,AT4G25200,AT4G27670,AT5G12020,AT5G51440,AT5G59720,AT1G07400,AT2G29500,AT1G65340,AT3G26280,AT5G02900,AT4G39500,AT1G20160,AT5G08260,AT5G24820,AT5G50260,AT3G60020,AT3G22700,AT2G17690,AT3G17400,AT3G60010,AT1G63950,AT5G09980,AT1G71770,AT3G19350,AT2G18720,AT4G23600,AT1G24520,AT3G28570,AT5G15250,AT5G54190,AT5G53680,AT3G03240,AT2G18260,AT1G53080,AT2G28490,AT3G43880,AT4G09500,AT2G37770,AT4G17470,AT4G18900,AT4G22390,AT5G41830,AT4G14365,AT1G19610,AT1G65150,AT5G40000,AT1G72660,AT3G28580,AT1G30660,AT1G68350,AT2G40680,AT2G28570,AT3G62990,AT4G05370,AT4G01985,AT1G20070,AT1G24380,AT1G48720,AT1G59920,AT1G61255,AT1G65090,AT1G66060,AT1G70440,AT1G53480,AT2G04600,AT2G23110,AT2G45840,AT3G10750,AT3G13130,AT3G13229,AT3G15310,AT3G29790,AT3G42725,AT3G61090,AT4G13680,AT4G16460,AT5G05220,AT5G07330,AT5G40800,AT5G53710,AT5G60350,AT5G63350,AT5G66780,AT3G56220,AT1G19530,AT5G02210 GOERES_5FC_TDT-1MUTANT_DN Reduced RNA level genes with at least a 5-fold in tdt-1 mutants (Table S1 PubmedID:17513503) AT4G33790,AT2G32860,AT3G21560,AT5G14200,AT5G25980,AT3G19710,AT3G62040,AT5G23020,AT5G23010,AT3G02020,AT1G06360,AT1G05700,AT1G74670,AT3G03190,AT5G64110,AT5G20970,AT5G55250,AT1G71692,AT1G68880,AT2G28160,AT5G45105,AT1G01580,AT1G32450,AT4G19690,AT4G12030,AT5G23980,AT3G58810,AT5G63850,AT5G09220,AT1G06830,AT1G13710,AT1G70850,AT2G40330,AT3G54600,AT2G32100,AT2G33790,AT3G18200,AT1G67870,AT4G29030,AT2G17880,AT4G00780,AT5G02780,AT4G12545,AT2G40610,AT4G12550,AT5G45070,AT3G54500,AT5G19120,AT2G28780,AT3G06070,AT3G16670,AT2G20670 CARTAGENA_SDG4-MUTANT_FLOWER_UP Up-regulated in sdg4 mutant flowers (Table 2 PubmedID:18252252) AT1G59860,AT3G12580,AT2G32120,AT2G26150,AT1G12610,AT1G26945,AT4G34410,AT5G12110,AT4G30850,AT3G01830,AT2G19070,AT4G16590,AT2G44840,AT3G02840,AT1G70130,AT1G52690,AT3G51590,AT5G07420,AT3G48520,AT5G52400,AT5G59820,AT3G63060,AT1G67990,AT3G54020,AT3G14440,AT1G66120,AT2G46240,AT4G27657,AT1G20310,AT2G34600,AT5G02580,AT1G30135,AT5G10695,AT5G03210,AT1G07400,AT2G20560,AT3G14200,AT3G24500,AT1G80840,AT3G51910,AT1G14200,AT2G39200,AT5G38130,AT3G25780,AT2G46370,AT4G25010,AT1G15520,AT3G17130,AT5G63450,AT1G69500,AT5G45950,AT2G24600,AT1G02400,AT5G26220,AT2G22880,AT1G56660,AT1G19180,AT3G06890,AT2G19310,AT4G01360,AT5G50360,AT1G74310,AT5G52640,AT3G16050,AT4G23810,AT3G61890,AT4G30860,AT1G78070,AT1G28480,AT1G66090,AT2G06050,AT1G70720,AT5G42650,AT2G27690,AT2G24210,AT4G11280,AT1G07350,AT5G48570,AT4G27654,AT1G66080,AT4G24380,BX824487,AT1G52565,AT5G50335,AT4G29780,AT2G29500,AT1G54050,AT4G12400,AT1G19210,AT5G21960,AT1G74930,AT5G05410,AT5G42380,AT2G29450,AT3G22840,AT4G30280,AT3G25180,AT5G16960,AT4G14020,AT1G20510,AT3G09350,AT1G72520,AT5G62520,AT3G07090,AT1G17380,AT2G17660,AT4G16515,AT5G19230,AT5G13220 CARTAGENA_SDG4-MUTANT_FLOWER_DN Down-regulated in sdg4 mutant flowers (Table 1 PubmedID:18252252) AT2G45220,AT4G02130,AT5G61590,AT5G41040,AT4G35770,AT5G24470,AT1G16390,AT1G70680,AT4G01575,AT4G21870,AT1G66850,AT2G37130,AT1G68050,AT4G14040,AT3G01345,CHR3:0138,AT2G33830,AT2G40330,AT2G05540,AT4G14130,AT3G46640,AT5G20250,AT1G29930,AT1G06260,AT1G53480,1301-01388,AT5G09530,AT1G80440,AT3G01290,AT3G25050,AT3G60140,AT5G07530,AT5G50260,AT2G20670,AT1G04540,AT5G45880,AT4G37540,AT4G28040 LILDBALLE_GO_SALT-STRESS_HMGB1_DN Down-regulated genes of the GO category response-to-salt-stress in hmgb1 (Table S1 PubmedID:18822296) AT5G52300,AT4G30660,AT1G54100,AT4G23600,AT2G39800,AT5G52310,AT4G30650,AT5G25610,AT4G39090,AT5G24770,AT1G56650,AT3G05880,AT5G62530,AT1G05260,AT2G36270,AT5G50720,AT3G50500,AT1G18710,AT2G24040,AT2G17840,AT3G61890,AT5G46180 LILDBALLE_HMGB1/COL-0-MICROARRAYA_UP Up-regulated of fold expression in hmgb1 versus Col-0 microarraya (Table 2 PubmedID:18822296) AT4G12550,AT2G27395,AT5G66750,AT5G44635,AT4G35570 LILDBALLE_HMGB1/COL-0-MICROARRAYA_DN Down-regulated of fold expression in hmgb1 versus Col-0 microarraya (Table 2 PubmedID:18822296) AT4G10250,AT1G52690,AT2G18050,AT1G56650,AT4G30650,AT2G30620,AT1G49240 LILDBALLE_H1/COL-0-QPCRB_UP Up-regulated of fold expression in hmgb1 versus Col-0 qPCRb (Table 2 PubmedID:18822296) AT4G12550,AT2G27395,AT5G66750,AT5G44635,AT4G35570,AT1G49240 LILDBALLE_H1/COL-0-QPCRB_DN Down-regulated of fold expression in hmgb1 versus Col-0 qPCRb (Table 2 PubmedID:18822296) AT4G10250,AT1G52690,AT2G18050,AT1G56650,AT4G30650,AT2G30620 SHIN_COL-0(R)/COL-0(D)_PIFQ(D)/COL-0(D)_UP Up-regulated of shared DEGs between Col-0(R)/Col-0(D) and pifQ(D)/Col-0(D) (Table S1 PubmedID:19380720) AT1G29920,AT2G05070,AT2G34430,AT3G54890,AT3G45140,AT5G54270,AT3G27690,AT2G05100,AT1G29910,AT2G34420,AT3G47470,AT1G31330,AT5G38430,AT5G64040,AT1G15820,AT5G48490,AT4G28750,AT3G25770,AT4G04840,AT1G76080,AT4G10340,AT5G64770,AT1G61520,AT1G70820,AT1G55670,AT1G30380,AT1G31580,AT1G08380,AT5G01530,AT1G79040,AT3G21055,AT2G30570,AT4G02770,AT4G28780,AT1G60950,AT1G29930,AT1G72610,AT4G05180,AT1G03130,AT2G06520,AT1G21500,AT2G31380,AT5G54770,AT2G39730,AT3G14210,AT1G06680,AT1G74670,AT5G35480,AT1G20340,AT4G38840,AT3G61470,AT1G52230,AT1G22690,AT2G30520,AT4G25050,AT2G01890,AT3G50820,AT1G59030,AT3G05730,AT5G38410,AT1G44446,AT4G09650,AT3G50270,AT1G76100,AT4G12800,AT4G39510,AT1G54040,AT1G12900,AT5G20630,AT2G43550,AT5G66570,AT4G38970,AT2G10940,AT3G01500,AT1G29660,AT5G16030,AT2G42220,AT1G67090,AT2G34620,AT5G02160,AT2G27402,AT1G54820,AT3G08940,AT3G48720,AT4G04640,AT3G27830,AT2G03750,AT5G44190,AT4G04850,AT1G41880,AT3G14760,AT5G60390,AT1G51805,AT4G18480,AT4G34610,AT1G23130,AT5G46690,AT3G47250,AT3G26650,AT3G16660,AT2G21330,AT5G39530,AT5G07240,AT2G37660,AT4G09010,AT3G16670,AT3G10520,AT4G27520,AT3G17170,AT4G11460,AT3G15850,AT1G15980,AT3G62030,AT1G24020,AT1G14700,AT3G46490,AT3G53460,AT3G04290,AT3G06880,AT2G41120,AT3G52150,AT3G48350,AT3G54900,AT4G02800,AT1G66970,AT5G16250,AT4G23670,AT5G45700,AT1G78490,AT3G26520,AT1G58290,AT3G25920,AT2G48070,AT3G05590,AT2G38540,AT5G65010,AT4G17470,AT1G13440,AT5G09650,AT1G78630,AT4G34950,AT5G45930,AT1G21460,AT5G08280,AT4G05320,AT3G53250,AT5G14320,AT1G13270,AT4G23680,AT1G77940,AT1G33600,AT3G63490,AT3G04840,AT2G31400,AT1G55490,AT5G38990,AT3G54090,AT3G45050,AT1G19550,AT1G37130,AT5G26280,AT5G23820,AT1G07890,AT5G28010,AT1G54010,AT4G37410,AT1G76190,AT5G57810,AT5G03160,AT1G29490,AT3G56040,AT3G20370,AT1G33590,AT5G55220 SHIN_COL-0(R)/COL-0(D)_PIFQ(D)/COL-0(D)_DN Down-regulated of shared DEGs between Col-0(R)/Col-0(D) and pifQ(D)/Col-0(D) (Table S1 PubmedID:19380720) AT1G26945,AT1G17430,AT5G24580,AT3G05920,AT1G60610,AT3G55940,AT5G09370,AT2G04240,AT3G17580,AT1G35710,AT2G43060,AT1G77330,AT5G48900,AT5G66590,AT2G41010,AT1G69490,AT5G18000,AT5G05965,AT2G40250,AT1G16850,AT3G59690,AT5G42690,AT5G39240,AT3G28340,AT2G40970,AT1G70270,AT5G51670,AT4G16442,AT2G35760,AT1G77200,AT2G43610,AT4G27310,AT2G28780,AT1G64660,AT3G62090,AT4G11050,AT2G47160,AT4G35070,AT2G01770,AT1G10140,AT1G02340,AT4G14465,AT4G28410,AT1G75450,AT3G60650,AT2G31980,AT2G37670,AT4G10020,AT1G03170,AT4G22460,AT1G72200,AT4G26460,AT4G12500,AT1G70710,AT4G37740,AT2G25130,AT4G35190,AT4G12470,AT2G37280,AT3G51400,AT5G10770,AT4G31380,AT1G76240,AT3G54510,AT2G32990,AT1G34630,AT4G32280,AT1G34110,AT5G02260,AT3G21330,AT4G12410,AT1G70260,AT2G19660,AT1G02205,AT4G06744,AT1G64110,AT4G11290,AT4G27460,AT1G20790,AT3G44550,AT1G01600,AT2G42610,AT1G58410,AT1G48820,AT1G53690,AT3G20180,AT3G10290,AT4G34770,AT1G75780,AT4G32500,AT1G15760,AT2G39980,AT4G25260,AT1G19510,AT1G60450,AT1G62510,AT5G07030,AT3G48260,AT4G16670,AT4G12520,AT3G49970,AT4G12480,AT3G28857,AT3G21090,AT4G30180,AT3G43270,AT5G66650,AT3G54830,AT3G51895,AT4G02290,AT4G16780,AT4G13210,AT4G13790,AT3G50330,AT3G29410,AT4G34530,AT5G02580,AT3G25730,AT3G61830,AT2G28630,AT5G14360,AT5G06570,AT4G26390,AT1G49570,AT2G41480,AT4G36430,AT5G01330,AT1G60060,AT1G06080,AT5G07010,AT4G37580,AT1G02800,AT5G60660,AT5G15720,AT2G39855,AT5G57760,AT1G15620,AT2G44570,AT5G19890,AT5G53980,AT2G43050,AT5G59040,AT5G51210,AT5G65800,AT5G63650,AT2G33380,AT4G09530,AT3G44560,AT4G35720,AT5G53660,AT4G11610,AT5G02540,AT3G12820,AT2G46970,AT5G04120,AT2G21910,AT1G72290,AT4G10240 SHIN_PHOTOSYNTHETIC_COL-0(R)/COL-0(D)_UP Up-regulated expressions of photosynthetic genes in Col-0(R)/Col-0(D) (Table S3 PubmedID:19380720) AT2G05070,AT2G34430,AT3G54890,AT5G54270,AT3G27690,AT1G29910,AT3G47470,AT1G31330,AT5G64040,AT1G15820,AT4G28750,AT4G10340,AT1G61520,AT1G55670,AT1G30380,AT1G08380,AT5G01530,AT1G79040,AT3G21055,AT2G30570,AT4G02770,AT4G05180,AT1G03130,AT2G06520,AT3G61470,AT1G52230,AT3G50820,AT1G67740,AT4G12800,AT1G44575,AT3G08940,AT2G20260,AT3G16140,AT4G28660,AT1G19150,AT1G45474,AT2G30790,AT1G08550,AT2G40100 SHIN_PHOTOSYNTHETIC_PIFQ(D)/COL-0(D)_UP Up-regulated expressions of photosynthetic genes in pifQ(D)/Col-0(D) (Table S3 PubmedID:19380720) AT2G05070,AT2G34430,AT3G54890,AT5G54270,AT3G27690,AT1G29910,AT3G47470,AT1G31330,AT5G64040,AT1G15820,AT4G28750,AT4G10340,AT1G61520,AT1G55670,AT1G30380,AT1G08380,AT5G01530,AT1G79040,AT3G21055,AT2G30570,AT4G02770,AT4G05180,AT1G03130,AT2G06520,AT3G61470,AT1G52230,AT3G50820,AT1G67740,AT4G12800,AT1G44575,AT3G08940,AT2G20260,AT3G16140,AT4G28660,AT1G19150,AT1G45474,AT1G08550 SHIN_PHOTOSYNTHETIC_PIFQ(D)/COL-0(D)_DN Down-regulated expressions of photosynthetic genes in pifQ(D)/Col-0(D) (Table S3 PubmedID:19380720) AT2G30790,AT2G40100 SHIN_CHLOROPHYLL_COL-0(R)/COL-0(D)_UP Up-regulated expressions of chlorophyll biosynthetic genes in Col-0(R)/Col-0(D) (Table S4 PubmedID:19380720) AT1G44446,AT5G13630,AT3G56940,AT3G14930,AT1G58290,AT1G03630,AT2G40490,AT5G45930,AT4G25080,AT5G08280,AT4G01690,AT3G48730,AT1G08520,AT1G44318,AT2G26550,AT5G63290,AT2G30390,AT3G09150,AT1G69740,AT5G63570,AT1G58300,AT4G27440,AT3G51820,AT2G31250,AT2G26670,AT5G14220,AT1G69720,AT5G26030 SHIN_CHLOROPHYLL_COL-0(R)/COL-0(D)_DN Down-regulated expressions of chlorophyll biosynthetic genes in Col-0(R)/Col-0(D) (Table S4 PubmedID:19380720) AT1G09940,AT5G40850,AT5G54190 SHIN_CHLOROPHYLL_PIFQ(D)/COL-0(D)_UP Up-regulated expressions of chlorophyll biosynthetic genes in pifQ(D)/Col-0(D) (Table S4 PubmedID:19380720) AT1G44446,AT5G13630,AT3G56940,AT1G58290,AT3G14930,AT5G08280,AT5G45930,AT1G03630,AT5G40850,AT2G40490,AT4G27440,AT4G25080,AT4G01690,AT3G48730,AT3G09150,AT2G26550,AT5G63570,AT1G69740,AT1G08520,AT3G51820,AT2G30390,AT5G63290,AT1G58300,AT5G14220,AT1G09940,AT2G31250 SHIN_CHLOROPHYLL_PIFQ(D)/COL-0(D)_DN Down-regulated expressions of chlorophyll biosynthetic genes in pifQ(D)/Col-0(D) (Table S4 PubmedID:19380720) AT1G44318,AT1G69720,AT5G26030,AT2G26670,AT5G54190 HOSHI_AUXIN_TENGU-TRANSGENIC_DN Down-regulated and auxin-related genes in tengu-transgenic plants as identified by microarray analysis (Table 1 PubmedID:19329488) AT4G32280,AT3G53250,AT1G75590,AT5G18080,AT5G18030,AT5G18050,AT5G03310,AT1G29450,AT1G29510,AT4G27260,AT5G19140,AT1G28330,AT1G23080,AT3G23050,AT4G38850,AT5G18010,AT5G18060,AT1G29460,AT5G18020,AT1G29500,AT1G29440,AT3G03850,AT2G33830,AT5G01990 SCHAFFER_DARK_UP Induced in dark (DarkInduced S PubmedID:11158533) 90M3XP,40B12XP,106P1T7,185J6T7,34B5T7,F6D5T7,G10B10T7,103O20T7,116N6T7,105F22T7,113O7T7,119B15T7,142F3T7,181A5T7,198N9T7,190N22T7,220E4T7,205P8T7,F4C1T7,G8D10T7,81D1T7,114O8T7,123N7T7,126G7T7,158J17T7,171I23XP,212B8T7,8G5T7P,H7A6T7,H8H11T7,94E10XP,E2E7T7,67F4T7,131D23T7,167A24XP,172H5T7,176C22T7,193C17T7,205M3T7,247P1T7,G5B4T7,E11B1T7,158D14T7,214B11T7,F4F2T7,G2D4T7,G3F9T7,93M23T7,103P15T7,158K21XP,175C1T7,166M21XP,179N4XP,204G21T7,230I1T7,231K20T7,215M14T7,246E13T7,316B12T7,6E9T7P,F2D3T7,G5D1T7,H2E2T7,90A14T7,70H12T7,146I10T7,165N5T7,194K8T7,227O11T7,K3H11TP,92K19XP,90D12T7,105C14T7,157P3XP,130N23T7,161E21XP,134P22XP,144C13T7,175C19T7,172P2T7,187D3T7,201F12T7,202L7T7,205O21T7,212O21T7,223E13T7,310B11T7,H10G6T7,K4B4TP,lhy,cca1,ccr2,Gi,105L5XP,113P5T7,151A23T7,165J6T7,170C10T7,158A11T7,171F23T7,41D12T7,107F4XP,125K8T7,148C13T7,152L3T7,135E2XP,163H18T7,173D15XP,183H4T7,210N16T7,215C17T7,F2B9T7,E11A4T7,E11G8T7,122A16T7,143K6T7,E2F6T7,36E7XP,F2E12T7,92H17XP,88L10XP,116O5XP,125N5T7,174L7T7,165H20T7,175O18T7,168G8T7,182A11T7,185A20T7,203G6XP,242E22T7,G8F4T7,E10A7T7,117E18T7,113M19T7,122P6XP,162F23T7,179L10T7,191O11XP,247N12T7,E5F2T7,92D13XP,E2D4T7,115H10T7,147H21XP,162I3XP,172E4T7,196M10T7,185M19T7,211B6T7,231P23T7,215B3T7,251K2T7,312D10T7,G2A8T7,32D8T7,90C11T7,91D20T7,123A19T7,131G7XP,133D24T7,134I11T7,136N9XP,160A16T7,158F22T7,6D2T7P,E2A12T7,71D2T7,98N15XP,121J17T7,107C16XP,124M14T7,141N23XP,175C23T7,176B5T7,188G2T7,201K8T7,211D16T7,221N24T7,251K22T7,312F2T7,H8B11T7,G2C3T7,89D24T7,95M24XP,122H3T7,141H8XP,174A1T7,185E10T7,34H4TT,H2E12T7,E2F8T7,E5C12T7,129B11T7,133N3XP,154G4T7,174O23T7,176L7T7,177H22T7,201N13T7,205J9T7,211N1T7,206C21T7,310F10T7,303A9T7,140D19T7,172F2T7,187A11T7,E4A10T7,H4D5T7,G11B12T7,73F9T7,122I20XP,120B13T7,132H11XP,135G7XP,162M13T7,214F11T7,217P4T7,292H1T7,303C8T7,308C11T7,108J22T7,249H9T7,G11C5T7,G4C12T7,93F9T7,81E10XP,137L9T7,138K15XP,156I11T7,182E11T7,187F3XP,200H18T7,185D14T7,202D17T7,203B8T7,206G8T7,241C7T7,310C6T7,E12C12T7,E2H9T7,104J17T7,113I3T7,117P14XP,161H8T7,197F16T7,87E5T7,63E2T7,113H3XP,113K9XP,114O16XP,124N17T7,115N4T7,172M14T7,173I23XP,199E15T7,189L18T7,197H10T7,212L20T7,221C16T7,229C15T7,242K5T7,314D1T7,303H9T7,281D3T7,G10A11T7,92G17T7,106D14T7,281E2T7,F3C3T7,E6A3T7,123O1T7,108G19XP,119J14XP,120L23XP,138E14T7,145L1XP,165I19T7,169O4T7,181H24T7,193O8T7,191K3T7,186G23T7,221F23T7,222B3T7,217P1T7,303B5T7,317E10T7,31B8T7,E8D12T7,G1D8T7,49A2T7,34G4T7,103D24XP,150E20T7,200F4T7,247A5T7,G10A5T7,86F8XP,117F9XP,125D18T7,141C1T7,164H19T7,175H23T7,177K9T7,47F10T7,89J14T7,93P2T7,83A1T7,85H10XP,174N3T7,180O16T7,220P10T7,35G4T7,61C7T7,E2H3T7,122F2T7,149C14T7,162K16T7,175K11T7,173I15T7,189J17T7,282F9T7,G4C2T7,93G12XP,76D8T7,116I7T7,154I23T7,173O24T7,175J3T7,213O6T7,E11C5T7,G3F2T7,E3E1T7,80F3T7,103F11XP,111E1XP,113K17XP,125G21XP,109K9XP,129H6T7,168A18T7,200K24T7,229E4T7,214I21T7,K3A4T7,E10F10T7,E1D5T7,72D11T7,104K21T7,96L19T7,99O3T7,113I2T7,121M24T7,185O10XP,168L21T7,210O7T7,219D15T7,248J11T7,221K22T7,245H16T7,F3A10T7,E7F9T7,K3A5RP,H10D1T7,157F22T7,33D5T7,114F16T7,118C2T7,155L16T7,128K22T7,160P15T7,172B21T7,185J24T7,183C22T7,196E22T7,185M2T7,90P18T7,93M24T7,110F3T7,99O13T7,127F13T7,134J14T7,119J1XP,124J24T7,245J10T7,K3B9RP,181D23T7,36C1T7,170O22T7,173E15T7,194D3T7,5B10T7P,91I9T7,64H11T7,92G13T7,116O10T7,130J3T7,159F22T7,160J24T7,161A22T7,149M14T7,162B21T7,167C1T7,200F11T7,212O24T7,226H12T7,F1B10T7,E6E4T7,H4D1T7,G12E10T7,111K22T7,141I9T7,144G22T7,168C20T7,176J22T7,177E22T7,187G5T7,178G21T7,179A23T7,90F16T7,184I21T7,91B13T7,75F6T7,89M13T7,104A7T7,107I23T7,120G20T7,125N3T7,159H9T7,158I5XP,188I11T7,197G12T7,249K17T7,240C22T7,295G12T7,F10G8T7,G7G2T7,106E17T7,122C15T7,240F11T7,139A7T7,63A8T7,96K15T7,111C8T7,34H9T7,85C7T7,90C21T7,123B4T7,149B19T7,187N1T7,190G12T7,178O5T7,210H21T7,223L16T7,25s,rRNA,34E10T7,99O7T7,126N15T7,135O8T7,137K18T7,132E19XP,143B14T7,150A24T7,162D22T7,158K2T7,168M4T7,181D3T7,202K21T7,213J5T7,247G1T7,F1A8T7,214A8T7,157P15T7,177N23T7,3A4T7P,158E17T7,170N19T7,173I7T7,177I16T7,181G24T7,193J9T7,216H23T7,206B21T7,220N18T7,210A12T7,88G22T7,45B4T7,103O15T7,95L14T7,110N17T7,123H15XP,129F10T7,135P5T7,132J7T7,157C1T7,158G19T7,165D17T7,170D9T7,248K11T7,223F12T7,E6E1T7,147D21T7,161M1XP,93C1T7,168I24T7,162J11T7,173K2T7,181F10T7,182K17T7,203J15T7,218O8T7,206F17T7,222J11T7,183K2T7,185M6XP,104K7T7,128O24XP,140H17T7,161B14M4,165F17T7,201L3T7,195H5T7,201C14T7,224O21T7,226J3T7,246F7T7,F4H9T7,H4D7T7,306C8T7,75B10T7,96J7T7,91A18T7,121C14T7,136F22T7,185F24T7,188I7T7,178O2T7,111P16T7,116M13XP,137I21T7,161C5XP,171J16T7,172H17T7,E4A6T7,E6B5T7,G4A8T7,301F2T7,E11C1T7,H6G3T7,206O3T7,106F1XP,122G14T7,111D3T7,114C12T7,108P8T7,130H4T7,172E2T7,185J2T7,181G14T7,174J13T7,178F3T7,201K3T7,39H9T7,41H3T7,88O11T7,76C12T7,90L24XP,94L12T7,99D19T7,131J16T7,126H12T7,146B11T7,202D4T7,194D1T7,244L8T7,221P11T7A,F2C7T7,G11D12T7,145G11T7,133M21T7,36C11T7,115N21T7,119I20T7,94D19T7,123N22T7,172F23T7,173L24T7,175B7T7,185C8T7,218P8T7,196K24T7,207M21T7,86G11T7,105C23XP,128F10T7,146E13T7,167N18T7,169K4T7,170M8T7,201N20T7,E5E12T7,F6F6T7,317D5T7,C4,144C20T7,23D11T7,38E2T7,110D15T7,124C13T7,162D11T7,171J24T7,208A24T7,230I2T7,89B9T7,36H2XP,92C2XP,92F24T7,88K5T7,109O6T7,107E11T7,117I18T7,131D24T7,151F23T7,171J21T7,207M24T7,223N20T7,E8B4T7,122H23T7,151I19T7,177N14T7,175N17T7,204A13T7,90J2T7,94D2T7,104B10T7,109P7T7,114D23T7,166C8T7,187G12T7,212M10T7,E11D5T7,E12D8T7,H1G8T7,135H7T7,43C6T7,187C23T7,183N22T7,91A13T7,91D10T7,37H5XP,92E13T7,94L14T7,109N5T7,119A7T7,154N20T7,160B3T7,149C22T7,156F16XP,158A10T7,174J16T7,202L15T7,222A6T7,222F13T7,232F19T7,246K5T7,229H22T7,134B20T7,185A17T7,49B1T7,126G20T7,135M15T7,163H1T7,181N22T7,182C20T7,174M12T7,183I7T7,183O20T7,175K15T7,185C15T7,194M10T7,204H2T7,219B5T7,207P23T7,229N15T7,183M7XP,40D7T7,86G12T7,88I22T7,104E18T7,113H15T7,114J10T7,119A13T7,127P22T7,130B24T7,122H6T7,142K11T7,156G7T7,186J6T7,183C13XP,201O1T7,196K11T7,227F21T7,221D24T7,223N13T7,F4C11T7A,38B5T7,38E3T7,92D11T7,108G20T7,128A10T7,159M13T7,169L7T7,173A20T7,174D8T7,212A4T7,182K9T7,86D8T7,92G6T7,69G10T7,88K11T7,103A13T7,118F19XP,135B11T7,155A2T7,158P16T7,166C7T7,187F24XP,192K6T7,199O20T7,212I9T7,214N6T7,F2B5T7,G3G3T7,289H10T7,E6G10T7,K4F7TP,157J7XP,220I16T7,190I22T7,31G2T7,166B9T7,172M22T7,176P13T7,180K19T7,179M1T7,221J17T7,91M10T7,91F11XP,105A21T7,116E2T7,107G3T7,121D14T7,147C20XP,155E7XP,166D4T7,177I22T7,200A22T7,212B17T7,227O2T7,231O19T7,283C8T7,181D10T7,H10F8T7,H3G3T7,135L24T7,113E5T7,91H2T7,107J19T7,156N23T7,166H2T7,159I6T7,148G2T7,170D2T7,171H11T7,185B17T7,200K16T7,88F22T7 SCHAFFER_LIGHT_UP Induced in light (LightInduced S PubmedID:11158533) 89M16T7,G7C1T7,G8G4T7,139N5XP,132I17T7,315E3T7,H10C1T7,SC,E6E8T7,H10D6T7,197N13T7,BT,167H1T7,189P16T7,162H21T7,146I10T7,227O11T7,G2H7T7,cca1,115B7T7,196E14T7,E8B5T7,108A20XP,G5F4T7,92H17XP,106J2T7,E6C1T7,164E1T7,162I3XP,179N7T7,F4A9T7,121L4XP,113N21T7,133D24T7,147N16XP,141N23XP,185N8T7,G2C3T7,158J22T7,H4C3T7,G12G3T7,118E14T7,138A21T7,203M12T7,205J9T7,307C9T7,48C3XP,G11B12T7,E5E2T7,245D8T7,242C2T7,195N8T7,203B8T7,E1B5T7,203P21T7,197D8T7,193C4T7,E1A12T7,E3F12T7,193P24T7,249C24T7,104I1T7,109K9XP,160D14T7,190I21T7,198D19T7,214I21T7,85C8T7,44G6T7,96L19T7,197H11T7,201B12T7,F1A1T7,G12G2T7,199I6T7,44B1T7,93M24T7,118I1T7,121G14T7,285B12T7,162B21T7,201L2T7,311D12T7,K3B11T7,144G22T7,188I11T7,201C15T7,111C8T7,ccr2,126N15T7,130G14T7,168H4T7,279E1T7,177I16T7,171F14T7,173N1T7,276G3T7,206F17T7,222J11T7,92H8T7,111P16T7,141N21T7,G4A8T7,158L18M4,92F2T7,141M23T7,119A21T7,178M17T7,89D12XP,104B10T7,178P4T7,G4G9T7,207F6T7,222A6T7,40D7T7,291H6T7,305C5T7,103A13T7,192K6T7,K4F7TP,43C4T7,132I20T7,103B6T7,G5D4T7,170D2T7 GOLDSTEIN_PK12LAMMER-KINASE_UP Upregulated Transcripts in the PK12 LAMMER Kinase Overexpression Line (Table 1 PubmedID:12671088) AT4G24190,AT3G09440,AT5G28540,AT5G19180,AT2G26990,AT5G10760,AT1G74710,AT1G72930,AT1G72910,AT1G31580,AT1G02920,AT1G02930,AT1G07600,AT1G21310,AT1G34750,AT3G51240,AT2G45300 GOLDSTEIN_PK12LAMMER-KINASE_DN Downregulated Transcripts in the PK12 LAMMER Kinase Overexpression Line (Table 1 PubmedID:12671088) AT1G44575,AT1G29930,AT1G31330,AT4G12800,AT3G61470,AT4G10340,AT5G38410,AT1G32060,AT5G46800,AT3G61580,AT5G49360,AT3G47340,AT4G35770,AT5G21170,AT5G19770,AT1G36060 EKMAN_SAGE-TAG_TNT_UP Induced by SAGE tags at least 10-fold by exposure to TNT (Table 1 PubmedID:14551330) AT2G18915,AT1G17170,AT3G44300,AT3G27740,AT5G13750,AT1G60940,AT5G03630,AT5G08790,AT4G01870,AT3G41950,AT3G28740,AT4G19880,AT3G45270,AT3G21720,AT2G29490,AT1G78080,AT1G01550,AT1G05680,AT2G28570,AT1G75270,AT1G76680 EKMAN_CYTOCHROME-P450_TNT_UP Induced Cytochrome P450 genes by exposure to TNT (Table 2 PubmedID:14551330) AT3G28740,AT2G30750,AT4G22690,AT4G22710,AT2G30490,AT1G64900,AT1G64940,AT1G64950 EKMAN_SAGE-TAG_POTENTIAL-DETOXIFICATION_TNT_UP TNT-induced SAGE tags representing potential detoxification pathway components (Table 3 PubmedID:14551330) AT5G54500,AT1G78340,AT3G09390,AT4G19880,AT2G18160,AT3G28480,AT4G03430,AT2G16680,AT5G48930,AT3G44300,AT1G76930,AT5G20830,AT1G07890,AT3G58500,AT3G53480,AT5G07460,AT4G11600,AT3G24170,AT2G44350,AT3G44320,AT1G51680,AT4G30170 EKMAN_SAGE-TAG_TNT_DN Repressed by SAGE tags at least 14-fold by exposure to TNT (Table 4 PubmedID:14551330) AT4G12550,AT2G01520,AT1G70850,AT4G12545,AT2G36830,AT1G09690,AT4G22212,AT1G01620,AT5G23710,AT3G54580,AT5G19510,AT4G38740,AT1G14960,AT5G56540,AT4G17340,AT4G12520,AT1G21100,AT5G04750,AT1G04820,AT5G26260,AT5G14200,AT4G14960 PUFKY_20MIN_AUXIN_TREND207_UP Upregulated genes by 20min_Fold Change in auxin_trend207 (Table S2 PubmedID:14648238) AT2G14960,AT5G47370,AT1G78100,AT3G45420,AT2G23170,AT4G14560,AT5G66580,AT2G32870,AT2G42430,AT4G27190,AT3G58190,AT5G44810,AT5G58340,AT1G29500,AT1G68360,AT5G54490,AT1G52830,AT4G37390,AT1G68610,AT3G23030,AT3G50800,AT4G17460,AT4G13790,AT5G44260,AT1G29440,AT3G14370,AT4G37410,AT5G52900,AT5G54560,AT1G29460,AT2G39370,AT1G29450,AT3G03820,AT2G34650,AT4G37770,AT3G05720,AT1G04240,AT1G29510,AT4G25420,AT4G37890,AT1G09350,AT1G29630,AT4G09890,AT3G20830,AT1G51170,AT1G56600,AT4G22780,AT4G27260,AT3G51410,AT5G54510,AT1G30100,AT2G25150,AT1G03820,AT2G28290,AT4G21200,AT1G59500,AT1G63580,AT4G34760,AT4G38850,AT2G18050,AT2G37430,AT1G05740,AT1G18400,AT5G44580,AT1G26360,AT5G02760,AT1G05820,AT4G25490,AT5G09530,AT5G49490,AT1G21510,AT2G28490,AT1G10650,AT2G28800,AT3G11430,AT5G39860,AT1G23300,AT2G23060,AT3G20150,AT1G14500,AT2G38160,AT2G45420,AT4G20260,AT4G38860,AT1G29430,AT1G33100,AT1G63550,AT3G48760,AT4G15310,AT5G57520,AT5G61260,AT1G34570,AT5G51990,AT1G08440,AT1G76180,AT4G21240,AT4G33800,AT4G35010,AT5G20470,AT5G55230,AT1G29610,AT4G04450,AT5G04120,AT5G37030,AT5G39370,AT4G29770,AT5G01900,AT5G07050,AT1G09310,AT5G12030,AT5G62210,AT2G34990,AT3G19850,AT2G32580,AT1G62480,AT3G55310 PUFKY_20MIN_AUXIN_TREND207_DN Downregulated genes by 20min_Fold Change in auxin_trend207 (Table S2 PubmedID:14648238) AT5G11050,AT2G11120,AT1G50310,AT3G44790,AT1G15660,AT1G30060,AT1G30480,AT3G61510,AT5G47210,AT1G08550,AT1G20750,AT1G63490,AT2G01500,AT2G17430,AT2G26040,AT4G27030,AT3G51240,AT4G04840,AT1G23940,AT1G65060,AT3G22770,AT3G57020,AT3G58300,AT1G52110,AT1G03770,AT1G33240,AT1G36110,AT2G21490,AT5G08640,AT5G40450,AT1G14460,AT3G10040,AT5G48880,AT1G05670,AT4G28520,AT1G14390,AT3G22840,AT5G58160,AT1G62560,AT1G29580,AT2G16060,AT1G05880,AT1G43800,AT1G50390,AT1G63410,AT3G21720,AT4G39260,AT5G04400,AT1G48400,AT5G28510,AT5G37460,AT1G05650,AT1G33220,AT1G55420,AT1G35440,AT1G29680,AT1G48530,AT1G51490,AT1G77120,AT5G37430,AT5G09340,AT1G66360,AT1G63350,AT1G66320,AT1G69720,AT5G19360,AT1G14420 PUFKY_40MIN_AUXIN_TREND207_UP Upregulated genes by 40min_Fold Change in auxin_trend207 (Table S2 PubmedID:14648238) AT4G37390,AT5G58160,AT2G14960,AT1G21510,AT5G52900,AT2G23170,AT3G61510,AT5G47370,AT3G58190,AT5G66580,AT4G38850,AT2G42430,AT1G59500,AT1G14390,AT4G37770,AT1G78100,AT1G26360,AT4G17460,AT1G20750,AT1G29430,AT5G01900,AT4G04450,AT3G05720,AT1G43800,AT1G30100,AT5G11050,AT5G07050,AT3G22840,AT5G54490,AT5G49490,AT1G29500,AT1G29440,AT1G14420,AT3G14370,AT1G29510,AT5G48880,AT3G03820,AT1G68360,AT1G14460,AT5G37460,AT4G25420,AT4G13790,AT1G50310,AT2G39370,AT1G63490,AT5G20470,AT4G38860,AT1G63580,AT1G29460,AT4G37890,AT1G05820,AT5G08640,AT2G16060,AT1G29580,AT1G29450,AT1G05670,AT1G03770,AT3G57020,AT3G23030,AT1G51490,AT1G29680,AT3G51240,AT1G05740,AT4G34760,AT3G51410,AT3G22770,AT5G61260,AT5G37430,AT1G63350,AT1G33220,AT4G22780,AT2G37430,AT1G33240,AT1G29630,AT1G63550,AT1G33100,AT1G14500,AT1G09350,AT3G19850,AT2G38160,AT2G26040,AT2G11120,AT1G65060,AT1G34570,AT1G05650,AT4G33800,AT2G01500,AT1G69720,AT1G52110,AT1G05880,AT5G62210,AT5G19360,AT4G15310,AT4G04840,AT2G17430,AT1G63410,AT1G50390,AT4G27030,AT3G20830,AT2G34990,AT2G21490,AT1G29610,AT5G39370,AT5G04400,AT1G77120,AT1G56600,AT5G02760,AT3G21720,AT1G66320,AT1G51170,AT1G03820,AT5G39860,AT4G14560,AT1G66360,AT1G52830,AT1G23940,AT1G18400,AT4G09890,AT5G37030,AT1G04240,AT3G50800,AT2G45420,AT2G34650,AT1G68610,AT4G27260,AT3G20150,AT4G21200,AT1G55420,AT2G28490,AT2G23060,AT5G54510,AT5G57520,AT2G32870,AT1G23300,AT5G58340,AT1G62560,AT4G39260,AT1G36110,AT1G35440,AT5G28510,AT5G09340,AT3G58300,AT1G08440,AT1G48400,AT1G30060 PUFKY_40MIN_AUXIN_TREND207_DN Downregulated genes by 40min_Fold Change in auxin_trend207 (Table S2 PubmedID:14648238) AT3G44790,AT4G35010,AT5G12030,AT3G45420,AT1G48530,AT4G27190,AT2G32580,AT4G37410,AT5G54560,AT3G10040,AT4G29770,AT4G21240,AT5G44810,AT5G44260,AT5G55230,AT5G51990,AT5G47210,AT5G40450,AT4G20260,AT3G55310,AT2G28800,AT2G18050,AT1G76180,AT3G48760,AT1G09310,AT1G10650,AT5G44580,AT2G25150,AT4G28520,AT2G28290,AT4G25490,AT5G04120,AT3G11430,AT1G30480,AT5G09530,AT1G15660,AT1G62480,AT1G08550 PUFKY_60MIN_AUXIN_TREND207_UP Upregulated genes by 60min_Fold Change in auxin_trend207 (Table S2 PubmedID:14648238) AT4G37390,AT2G23170,AT2G14960,AT1G59500,AT3G58190,AT2G42430,AT5G47370,AT4G37770,AT5G52900,AT1G09350,AT4G37890,AT4G27260,AT1G29500,AT1G52830,AT5G54490,AT5G66580,AT1G56600,AT2G39370,AT1G78100,AT4G21240,AT4G17460,AT1G29460,AT4G38850,AT1G29440,AT1G51170,AT5G39860,AT3G14370,AT4G13790,AT3G58300,AT4G25420,AT5G12030,AT1G62560,AT3G03820,AT1G66360,AT3G44790,AT5G54510,AT3G20830,AT1G29450,AT4G34760,AT1G08440,AT1G23300,AT2G45420,AT3G51410,AT4G09890,AT4G21200,AT1G29510,AT4G35010,AT5G39370,AT1G03820,AT1G18400,AT3G23030,AT4G22780,AT1G14500,AT1G36110,AT1G68360,AT4G29770,AT5G37030,AT1G30060,AT2G23060,AT5G02760,AT5G57520,AT1G04240,AT1G23940,AT1G30100,AT2G28490,AT3G21720,AT4G14560,AT1G48530,AT1G29430,AT1G63410,AT2G34650,AT1G29610,AT1G08550,AT2G11120,AT2G28290,AT3G55310,AT4G28520,AT1G05740,AT1G29630,AT1G34570,AT4G38860,AT1G05880,AT3G19850,AT3G50800,AT1G33100,AT2G01500,AT2G38160,AT1G15660,AT1G26360,AT2G34990,AT1G55420,AT1G14420,AT1G48400,AT4G25490,AT5G28510,AT5G44260,AT1G50310,AT2G18050,AT5G55230,AT1G33220,AT1G51490,AT1G05820,AT1G69720,AT1G77120,AT3G22840,AT3G51240,AT3G61510,AT5G37460,AT1G30480,AT1G35440,AT1G65060,AT2G32870,AT4G15310,AT1G52110,AT1G63350,AT1G66320,AT2G16060,AT2G21490,AT3G05720,AT3G11430,AT5G08640,AT5G48880,AT1G43800,AT1G63550,AT1G63580,AT1G68610,AT2G25150,AT3G22770,AT5G04400,AT5G19360,AT5G44580,AT5G51990,AT4G27030,AT4G33800,AT1G05670,AT3G57020,AT4G37410,AT5G62210,AT5G11050,AT1G21510,AT1G29580 PUFKY_60MIN_AUXIN_TREND207_DN Downregulated genes by 60min_Fold Change in auxin_trend207 (Table S2 PubmedID:14648238) AT1G29680,AT5G09340,AT4G27190,AT1G63490,AT1G14390,AT5G37430,AT1G05650,AT1G33240,AT4G39260,AT5G04120,AT5G09530,AT5G20470,AT2G37430,AT4G20260,AT5G49490,AT1G20750,AT5G07050,AT1G03770,AT3G45420,AT2G26040,AT3G48760,AT5G58340,AT5G61260,AT1G14460,AT1G50390,AT5G01900,AT5G40450,AT1G10650,AT4G04840,AT5G47210,AT1G09310,AT4G04450,AT1G76180,AT5G44810,AT5G58160,AT2G28800,AT1G62480,AT5G54560,AT2G17430,AT3G10040,AT2G32580,AT3G20150 MATSUI_4FC_UP Singificance_Up&>4.0FC (S 02 PubmedID:15668208) AT1G12840,AT1G13440,AT1G07920,AT1G30380,AT1G25275,AT1G08380,AT1G58684,AT1G26880,AT1G20010,AT1G20020,AT1G20620,AT1G61520,AT1G04750,AT1G34030,AT1G79010,AT1G43170,AT1G05850,AT1G22840,AT1G18080,AT1G75350,AT1G24020,AT1G75690,AT2G47400,AT2G41840,AT2G30860,AT2G25210,AT2G25450,AT2G25510,AT2G26900,AT2G43780,AT2G32690,AT2G38540,AT2G39460,AT2G10940,AT2G28000,AT2G28190,AT2G18020,AT3G53730,AT3G54210,AT3G26520,AT3G19820,AT3G55440,AT3G61110,AT3G61470,AT3G15353,AT3G15360,AT3G22120,AT3G50820,AT3G11940,AT3G06700,AT3G07230,AT3G24830,AT3G47833,AT3G13520,AT4G38840,AT4G03210,AT4G29350,AT4G39730,AT4G13510,AT4G35100,AT4G35450,AT4G14320,AT4G31030,AT4G05180,AT4G21280,AT5G12860,AT5G65220,AT5G19140,AT5G02450,AT5G02500,AT5G54770,AT5G66052,AT5G66570,AT5G15970,AT5G35160,AT5G51720,AT5G51970,AT5G24165,AT5G24490,AT5G11740,AT5G64040,AT5G64400,AT5G47700,AT1G11860,AT1G15930,AT2G33340,AT3G08940,AT3G54890,psbA,psbK,psbI,psbD,psaB,psaI,petA,psbJ,psbF,psaJ,rpl33,petB,rps3,rps12,ycf2 MATSUI_35S-ATMYB23SRDX-TRANSGENIC-PLANT_UP Upregulated Genes that might be related to cell elongation and whose expression was enhanced in 35S:: atMYB23SRDX transgenic plants (Table2 PubmedID:15668208) AT3G19820,AT4G38840,AT4G35100,AT5G11740,AT1G12840,AT4G03210 MA_COTYLEDON_LIGHT_UP Light up-regulated in Cot (TableS6 PubmedID:15888681) AT2G35070,AT4G25290,AT5G07460,AT5G01870,AT1G23130,AT1G54960,AT1G31250,AT4G21780,AT4G01900,AT5G47840,AT3G19800,AT5G36920,AT1G74730,AT1G31230,AT1G51000,AT1G34000,AT1G70610,AT2G37040,AT3G12145,AT3G14740,AT3G16860,AT4G10000,AT4G28031,AT5G13700,AT5G54180,AT5G66230,AT5G13800,AT1G62540,AT4G17090,AT1G77090,AT2G32480,AT1G13650,AT2G02810,AT1G65870,AT1G47980,AT5G26930,AT5G48470,AT3G55840,AT5G52690,AT5G27360,AT1G29700,AT1G06460,AT1G34420,AT3G47250,AT4G18810,AT1G18250,AT2G35210,AT3G50820,AT3G62530,AT3G50950,AT4G37930,AT4G27910,AT4G34190,AT4G21860,AT5G59120,AT2G46820,AT5G23820,AT4G19840,AT1G03630,AT1G32070,AT3G63410,AT3G25600,AT4G14040,AT5G53450,AT1G73060,AT1G03680,AT1G07610,AT1G66090,AT1G35560,AT1G72640,AT2G36250,AT2G42760,AT3G04030,AT4G23070,AT4G34590,AT4G17240,AT4G36700,AT5G67370,AT4G21210,AT4G19530,AT1G54780,AT1G03990,AT2G37240,AT3G01500,AT5G15160,AT5G48930,AT1G80450,AT2G30360,AT3G25530,AT4G04980,AT4G18740,AT5G43420,AT3G25870,AT5G22890,AT2G23300,AT2G14290,AT2G40460,AT3G19170,AT4G20760,AT4G10300,AT4G30530,AT5G35735,AT5G58120,AT4G03520,AT1G75040,AT1G26210,AT1G23740,AT1G23180,AT1G17290,AT2G34120,AT3G23840,AT3G06730,AT3G63140,AT4G27570,AT5G23010,AT5G61810,AT5G35630,AT5G36790,AT1G26690,AT1G67865,AT2G33850,AT3G02830,AT5G59070,AT5G47220,AT3G53190,AT5G44720,AT1G23020,AT2G03530,AT1G22500,AT3G57520,AT5G17990,AT5G48300,AT5G24290,AT2G39730,AT2G09980,AT1G23270,AT1G48030,AT1G15870,AT1G32990,AT2G23600,AT3G21580,AT3G14060,AT5G12860,AT2G32190,AT1G76620,AT2G43100,AT4G17300,AT5G24210,AT5G16010,AT1G65890,AT1G24140,AT1G20340,AT1G01790,AT1G56300,AT1G78620,AT3G58940,AT4G24720,AT4G37760,AT4G38460,AT1G75280,AT1G56500,AT3G48520,AT4G33510,AT4G05110,AT4G05330,AT4G09480,AT1G14250,AT3G49680,AT1G32480,AT2G35940,AT4G12030,AT5G59250,AT4G31840,AT1G16080,AT2G02500,AT1G14030,AT1G62320,AT5G23850,AT1G74430,AT1G56190,AT1G79050,AT1G77490,AT2G30390,AT4G11570,AT4G25130,AT4G03050,AT3G59340,AT5G46510,AT5G38510,AT1G14830,AT1G59960,AT1G08560,AT2G20920,AT2G32880,AT2G02320,AT3G61170,AT3G58010,AT5G54770,AT5G15450,AT1G29040,AT1G65900,AT4G16870,AT1G56510,AT1G76080,AT2G27290,AT2G23670,AT2G17660,AT3G18560,AT3G55330,AT3G58990,AT3G44970,AT4G39540,AT4G17250,AT4G14460,AT4G02530,AT5G65870,AT5G13120,AT5G08640,AT1G16410,AT4G26530,AT1G18060,AT1G21350,AT1G71290,AT1G02465,AT2G25890,AT3G54640,AT3G63160,AT5G64460,AT5G35475,AT5G65810,AT3G12580,AT1G04350,AT1G01140,AT4G28660,AT4G13770,AT3G58920,AT1G07370,AT2G31040,AT2G37770,AT3G16280,AT5G51000,AT2G42560,AT1G32500,AT4G31480,AT4G13490,AT2G19970,AT2G43530,AT4G15790,AT4G36530,AT5G64040,AT5G41240,AT4G20860,AT2G34490,AT3G44840,AT1G66080,AT1G31580,AT1G31170,AT1G14920,AT3G43990,AT3G15110,AT4G03060,AT1G63970,AT4G26520,AT3G14520,AT3G14420,AT1G15980,AT1G14280,AT2G20270,AT2G46100,AT4G33010,AT5G07020,AT5G47500,AT1G52030,AT3G15790,AT4G28750,AT5G02160,AT5G52810,AT5G13490,AT3G47960,AT5G40370,AT3G28520,AT2G35840,AT5G27350,AT1G58340,AT1G24020,AT3G01830,AT3G57640,AT3G23670,AT4G36830,AT5G50670,AT1G22990,AT3G27925,AT1G14520,AT4G23190,AT2G46650,AT2G15290,AT3G05730,AT4G00050,AT1G33970,AT3G60690,AT3G26290,AT1G30530,AT1G09340,AT2G05440,AT2G36970,AT3G45140,AT5G55280,AT4G27560,AT1G24330,AT1G52400,AT2G40520,AT3G29030,AT3G21750,AT4G29400,AT5G02940,AT5G45820,AT5G50101,AT2G20870,AT1G70820,AT4G24780,AT1G23840,AT4G04610,AT2G20880,AT4G37980,AT5G17521,AT5G56810,AT5G58770,AT3G06050,AT1G72115,AT2G14750,AT4G04790,AT3G15520,AT5G25980,AT5G41900,AT5G02950,AT1G78290,AT4G25210,AT1G12900,AT1G68010,AT1G68430,AT1G55480,AT1G52510,AT1G51115,AT1G66200,AT2G39030,AT2G02270,AT3G27110,AT4G09910,AT4G28590,AT4G21440,AT4G24380,AT4G01990,AT1G74440,AT5G06870,AT3G26060,AT2G33530,AT2G30820,AT1G06680,AT4G17340,AT1G31190,AT1G32440,AT4G00320,AT1G20030,AT2G04700,AT4G24930,AT4G03280,AT4G36240,AT5G06590,AT5G22440,AT3G02730,AT1G09490,AT3G28510,AT5G66190,AT3G44480,AT1G43670,AT2G43560,AT2G05950,AT3G50675,AT3G55880,AT3G54050,AT3G14210,AT4G15490,AT4G00670,AT4G29210,AT5G11590,AT5G64080,AT4G21170,AT1G23310,AT3G48320,AT1G80380,AT1G28380,AT1G78915,AT3G28270,AT3G44630,AT3G06880,AT4G36510,AT5G45850,AT3G28070,AT5G24060,AT5G11880,AT1G57820,AT1G42970,AT1G73210,AT5G14740,AT3G46490,AT3G50910,AT3G52750,AT3G03890,AT4G28780,AT4G22780,AT5G51820,AT5G60130,AT5G52970,AT4G37200,AT4G17050,AT1G03310,AT1G11960,AT1G21060,AT1G13610,AT4G30993,AT5G35170,AT4G09650,AT1G60590,AT3G57020,AT3G25570,AT4G29670,AT4G14950,AT4G33680,AT5G64850,AT5G50740,AT5G48880,AT5G51020,AT1G61190,AT1G77670,AT1G78140,AT1G23550,AT3G07720,AT3G21260,AT3G57610,AT5G10170,AT3G54020,AT1G62560,AT4G02630,AT1G72940,AT1G59790,AT1G34560,AT1G63610,AT1G18210,AT2G34810,AT3G03580,AT4G27070,AT5G08760,AT5G40170,AT5G01260,AT5G01730,AT5G63700,AT2G30810,AT1G12250,AT4G21940,AT1G17380,AT1G01570,AT1G73325,AT1G54040,AT4G15920,AT1G17950,AT5G42650,AT3G25760,AT4G22890,AT5G63980,AT2G33740,AT5G03170,AT3G18330,AT1G09795,AT2G04400,AT2G30950,AT4G28025,AT4G33260,AT5G22190,AT5G50890,AT5G61420,AT5G52410,AT5G19370,AT5G52580,AT5G20900,AT2G45660,AT1G66970,AT1G78370,AT1G76130,AT3G23990,AT4G01700,AT4G05180,AT5G58260,AT5G22620,AT5G20230,AT2G25080 MA_HYPOCOTYL_LIGHT_UP Light up-regulated in Hyp (TableS6 PubmedID:15888681) AT5G46430,AT1G65230,AT1G71200,AT1G16720,AT1G15440,AT5G38980,AT2G27660,AT3G13110,AT3G58790,AT3G26840,AT3G04290,AT3G06500,AT4G19020,AT4G01360,AT4G12480,AT4G01250,AT4G21870,AT5G50730,AT5G07460,AT5G14370,AT5G01870,AT5G05270,AT5G09220,AT5G09980,AT5G44950,AT5G01530,AT4G30330,AT5G52320,AT1G63360,AT1G51820,AT5G49080,AT1G14780,AT1G78210,AT1G53890,AT5G30480,AT1G20815,AT3G09440,AT4G01900,AT5G17630,AT5G52050,AT5G65990,AT3G13610,AT4G27720,AT1G10960,AT4G24130,AT4G29430,AT4G21280,AT3G59250,AT4G18010,AT1G78000,AT1G28327,AT1G51840,AT1G49410,AT1G50900,AT1G01470,AT1G74730,AT1G18590,AT1G34000,AT1G76450,AT1G59950,AT2G39250,AT2G37040,AT3G62230,AT3G44590,AT3G04840,AT3G20390,AT3G12145,AT3G16860,AT4G37410,AT5G13700,AT5G35890,AT4G24960,AT5G22630,AT4G17090,AT5G07090,AT3G06700,AT4G29410,AT4G13930,AT2G27550,AT2G45220,AT3G25830,AT4G01050,AT1G80340,AT1G42650,AT1G56340,AT1G63650,AT1G03210,AT1G23220,AT1G51680,AT2G26530,AT2G41680,AT2G30570,AT3G19550,AT3G19830,AT3G60120,AT5G08040,AT5G05420,AT5G08030,AT2G41880,AT4G22610,AT2G28790,AT5G06530,AT2G20260,AT2G05310,AT2G20450,AT5G16130,AT5G34990,AT4G27300,AT1G42300,AT5G06110,AT3G50820,AT1G54560,AT1G44930,AT1G70600,AT1G20310,AT1G69840,AT4G37930,AT4G34190,AT4G22710,AT5G51750,AT5G02450,AT5G53880,AT5G44580,AT2G46820,AT5G23820,AT3G24270,AT1G03630,AT1G61890,AT5G20290,AT2G34420,AT2G23120,AT2G22470,AT2G32990,AT4G14040,AT5G46730,AT5G53450,AT5G44780,AT4G34870,AT1G18710,AT1G03680,AT5G24380,AT2G35930,AT1G07610,AT3G23390,AT2G37180,AT1G66090,AT1G14410,AT1G77760,AT1G19410,AT2G21280,AT2G42760,AT3G27850,AT3G21240,AT4G12800,AT5G53750,AT5G67370,AT5G11740,AT2G39460,AT3G42650,AT1G26880,AT2G27710,AT2G32530,AT1G17420,AT1G78490,AT1G28290,AT1G75350,AT1G77450,AT1G73480,AT2G32220,AT3G01280,AT3G01500,AT4G04640,AT5G40540,AT5G49480,AT5G48930,AT3G46970,AT1G78630,AT5G24770,AT1G35310,AT3G26650,AT2G25210,AT1G28570,AT3G09630,AT1G14120,AT3G51820,AT2G26900,AT2G01180,AT3G20370,AT3G24830,AT3G02000,AT4G07780,AT5G56330,AT5G02240,AT1G54020,AT2G04390,AT2G47090,AT2G35290,AT1G72280,AT1G62975,AT1G07600,AT1G31330,AT1G13930,AT2G47590,AT3G19970,AT4G10300,AT4G30530,AT4G29030,AT5G35735,AT5G58120,AT1G53240,AT5G38940,AT3G49630,AT1G14040,AT2G23170,AT3G61220,AT2G26740,AT5G40110,AT1G11460,AT1G19570,AT1G74980,AT5G27380,AT3G55120,AT3G15530,AT3G55980,AT4G22520,AT4G27570,AT5G23010,AT5G11070,AT5G12890,AT5G14060,AT5G35630,AT5G36790,AT1G48630,AT1G04420,AT1G30700,AT1G43160,AT2G38540,AT2G21330,AT2G32130,AT2G22330,AT3G02830,AT3G53140,AT4G21990,AT4G34290,AT5G23530,AT5G62630,AT5G47220,AT1G49750,AT2G23910,AT1G23020,AT5G54270,AT5G36860,AT1G33840,AT1G08920,AT2G34430,AT2G46150,AT3G23250,AT3G54890,AT4G22990,AT4G17000,AT5G17990,AT5G17870,AT5G48300,AT2G39730,AT3G14600,AT3G52590,AT4G16950,AT1G06830,AT1G33350,AT1G48390,AT2G43570,AT2G01290,AT2G01250,AT4G30490,AT4G19980,AT5G45060,AT5G23510,AT5G01210,AT5G62390,AT5G17350,AT5G12860,AT4G36220,AT1G11840,AT2G32190,AT5G14200,AT5G01040,AT1G68510,AT1G37200,AT1G64680,AT1G79550,AT5G19220,AT2G43100,AT3G21230,AT3G18890,AT3G15810,AT1G58602,AT5G43690,AT2G19730,AT2G21170,AT1G65890,AT1G78970,AT1G15290,AT1G20340,AT1G52000,AT1G56300,AT5G33320,AT3G26830,AT3G10595,AT3G22550,AT5G27190,AT4G36710,AT4G10340,AT5G24780,AT5G45340,AT3G09500,AT1G31090,AT3G51450,AT1G26420,AT1G21500,AT1G56500,AT1G74360,AT1G08380,AT2G31790,AT2G47950,AT3G04400,AT3G19330,AT3G26570,AT4G27870,AT5G41070,AT5G13630,AT2G39800,AT2G38750,AT5G56670,AT3G55040,AT5G53050,AT3G15840,AT5G30584,AT3G44860,AT3G49680,AT1G42310,AT1G08290,AT1G11140,AT3G49430,AT2G25980,AT2G22880,AT3G21890,AT4G11990,AT4G37910,AT4G12030,AT5G49630,AT5G44870,AT5G59250,AT5G67080,AT5G59480,AT5G59520,AT1G54090,AT1G43560,AT1G51090,AT1G59124,AT1G68840,AT1G74430,AT1G65260,AT1G77490,AT3G45160,AT3G25780,AT1G41870,AT3G23830,AT4G20710,AT3G18290,AT3G17110,AT4G17600,AT4G25130,AT4G13430,AT5G09660,AT5G17760,AT3G22850,AT4G37800,AT1G32550,AT5G42530,AT5G36090,AT5G02610,AT4G14660,AT1G75860,AT1G12240,AT1G30580,AT1G59960,AT1G03360,AT1G41700,AT1G68945,AT2G42220,AT3G47980,AT3G21560,AT4G22240,AT5G64530,AT5G54770,AT5G13930,AT5G48360,AT4G13170,AT4G19810,AT1G26970,AT4G16870,AT3G52180,AT1G76080,AT1G77430,AT2G23670,AT2G35260,AT3G18620,AT3G58990,AT3G25250,AT3G20260,AT3G07770,AT3G55800,AT4G17250,AT5G26000,AT5G04140,AT5G13220,AT5G08640,AT1G50660,AT1G26930,AT1G51850,AT1G78280,AT1G62460,AT4G22020,AT1G10370,AT1G18060,AT1G02465,AT2G14860,AT2G24820,AT3G28930,AT4G30660,AT4G14630,AT4G29070,AT5G52870,AT5G51040,AT5G35475,AT1G09760,AT4G08030,AT4G24920,AT2G47060,AT3G59760,AT1G02560,AT2G01110,AT3G55605,AT3G43600,AT3G56290,AT3G61870,AT3G42990,AT4G28660,AT4G22490,AT4G26780,AT5G13510,AT5G02790,AT5G23310,AT5G14910,AT5G24420,AT4G25050,AT1G21440,AT3G57050,AT3G49910,AT2G45870,AT4G31795,AT1G60270,AT1G67020,AT2G23320,AT2G37770,AT4G35630,AT4G28080,AT5G61130,AT4G34710,AT2G36160,AT3G44750,AT1G67700,AT4G10500,AT3G13470,AT1G77990,AT1G60260,AT1G28390,AT1G21880,AT1G72520,AT5G09590,AT2G37030,AT2G22210,AT2G46340,AT3G32400,AT3G26080,AT3G22790,AT4G02280,AT5G64040,AT5G59550,AT2G20570,AT1G77060,AT1G13710,AT1G52230,AT2G22250,AT3G53890,AT3G23400,AT4G38420,AT5G23060,AT5G54710,AT5G58810,AT3G03630,AT4G29690,AT5G05590,AT3G14420,AT1G11925,AT1G15980,AT1G19180,AT1G63880,AT1G80110,AT1G76790,AT1G56600,AT2G21340,AT3G22310,AT3G23580,AT4G02230,AT4G39200,AT5G07020,AT5G47500,AT5G13200,AT3G08940,AT5G34835,AT4G23220,AT1G25250,AT1G09850,AT2G04370,AT2G24850,AT3G50970,AT3G15790,AT4G28750,AT5G13650,AT5G22460,AT5G13490,AT4G02940,AT2G17220,AT1G76160,AT1G76930,AT5G35120,AT2G38230,AT2G37880,AT3G01830,AT5G54170,AT4G28250,AT1G69530,AT2G35090,AT5G15090,AT2G05620,AT2G46650,AT3G56910,AT3G16050,AT4G22212,AT4G35480,AT4G31985,AT5G14150,AT4G08170,AT2G46420,AT5G62300,AT4G09900,AT5G15080,AT3G43560,AT1G24967,AT1G32900,AT1G09340,AT1G34050,AT1G70410,AT1G09780,AT2G02740,AT4G38410,AT4G38970,AT5G59320,AT5G17460,AT5G24160,AT1G29670,AT4G07640,AT1G65860,AT2G30770,AT2G29340,AT1G68590,AT5G28520,AT2G06520,AT2G37270,AT2G16900,AT2G25460,AT2G31470,AT3G49570,AT3G21750,AT4G13800,AT5G52310,AT5G02940,AT5G28510,AT4G04610,AT2G38390,AT5G62700,AT1G15140,AT5G49910,AT1G61520,AT3G22830,AT3G58660,AT5G29060,AT5G65010,AT5G64940,AT5G17521,AT5G40060,AT5G47930,AT5G57040,AT5G22530,AT1G35290,AT3G50760,AT5G42980,AT1G69700,AT3G55750,AT1G17100,AT1G72115,AT1G62180,AT1G23850,AT4G31780,AT5G38710,AT5G10130,AT1G06430,AT1G06650,AT1G59720,AT1G31650,AT1G61340,AT1G32060,AT1G30360,AT1G22150,AT1G27350,AT1G55670,AT3G54880,AT2G16660,AT2G28000,AT2G43620,AT3G54390,AT5G34800,AT3G59060,AT3G18080,AT4G31820,AT4G29780,AT4G36670,AT5G39790,AT5G09530,AT3G26060,AT4G04830,AT1G06680,AT1G76680,AT1G19670,AT1G03840,AT1G74890,AT1G17750,AT2G33270,AT2G18550,AT3G56940,AT3G19710,AT4G03280,AT5G23070,AT5G46110,AT5G12990,AT5G22440,AT3G02730,AT1G21310,AT2G16430,AT5G66190,AT5G23020,AT1G68830,AT1G69480,AT1G79770,AT1G52720,AT1G01610,AT1G44575,AT3G02020,AT3G54050,AT2G34860,AT2G30860,AT1G05010,AT1G18540,AT1G23310,AT1G63940,AT1G55020,AT1G77590,AT1G65400,AT1G08660,AT2G33580,AT2G43030,AT3G16080,AT3G23295,AT4G25730,AT5G16540,AT5G23740,AT1G54000,AT4G26290,AT5G43030,AT1G56250,AT5G61780,AT1G80270,AT1G32140,AT1G79850,AT2G43510,AT2G39980,AT2G38140,AT3G50910,AT3G18830,AT3G28220,AT3G05060,AT3G08740,AT3G14200,AT4G28280,AT5G54390,AT5G17830,AT5G38020,AT4G39950,AT3G62250,AT3G15350,AT2G44120,AT2G43020,AT1G47760,AT1G35680,AT1G66160,AT1G37130,AT1G23470,AT1G79480,AT3G25500,AT3G21470,AT3G04210,AT3G28500,AT5G35170,AT5G42800,AT2G21580,AT4G09650,AT4G01850,AT1G29660,AT1G01120,AT1G58270,AT1G78020,AT1G70700,AT2G26840,AT3G63380,AT3G53260,AT4G29670,AT4G33680,AT5G55050,AT5G64850,AT5G50740,AT5G04590,AT5G40950,AT5G48880,AT5G13750,AT5G15530,AT4G34950,AT5G47700,AT2G32060,AT4G31970,AT4G23180,AT1G33590,AT1G01980,AT1G30820,AT1G77670,AT1G43330,AT2G37190,AT3G02840,AT3G50930,AT4G39840,AT4G05100,AT5G13190,AT5G17670,AT3G54020,AT4G09590,AT1G51950,AT1G80530,AT5G26340,AT5G05600,AT1G78070,AT1G75460,AT1G18020,AT1G05800,AT1G44350,AT1G76420,AT1G80300,AT1G18210,AT2G23930,AT4G02770,AT4G14260,AT4G38740,AT4G39940,AT5G51440,AT5G45110,AT3G09390,AT4G08380,AT1G65560,AT1G48920,AT1G17380,AT1G79140,AT2G41100,AT5G28450,AT5G28670,AT5G22800,AT5G66570,AT5G42650,AT5G06320,AT5G12340,AT1G16400,AT4G24770,AT3G07110,AT5G48480,AT5G47910,AT5G48760,AT2G36580,AT1G35647,AT1G56580,AT2G44580,AT2G30490,AT2G41710,AT3G56340,AT3G58550,AT3G45960,AT4G22890,AT5G45775,AT4G38810,AT5G41970,AT5G09650,AT5G63450,AT5G63980,AT3G61640,AT5G34862,AT2G30040,AT2G16280,AT4G31550,AT4G12310,AT1G70130,AT1G11580,AT5G27520,AT2G04400,AT2G30950,AT3G57450,AT3G15990,AT5G61420,AT5G08050,AT5G55840,AT5G35540,AT4G26230,AT4G18100,AT4G22590,AT5G23960,AT1G24520,AT1G78370,AT1G58420,AT1G66580,AT1G32080,AT4G09820,AT2G21130,AT2G22420,AT2G41840,AT2G02750,AT3G55510,AT3G48500,AT3G04710,AT3G52960,AT4G27520,AT4G05180,AT5G55120,AT5G46450,AT5G58390,AT5G58960,AT5G54510,AT5G20230,AT2G37600,AT5G15650,AT2G10650,AT4G15320 MA_ROOT_LIGHT_UP Light up-regulated in Root (TableS6 PubmedID:15888681) AT4G20220,AT4G13010,AT5G48850,AT1G20815,AT1G19950,AT1G69230,AT2G25920,AT4G24830,AT5G60670,AT4G29080,AT4G27720,AT5G23370,AT4G29430,AT5G43620,AT1G49410,AT1G16630,AT2G29530,AT3G44590,AT4G37410,AT5G66230,AT5G37990,AT5G10260,AT3G06700,AT5G61110,AT2G17170,AT5G39550,AT1G54240,AT1G49290,AT5G28590,AT3G25830,AT4G26930,AT4G01050,AT5G20070,AT5G56940,AT5G12110,AT3G28900,AT4G12520,AT2G16740,AT1G04270,AT4G14320,AT1G27730,AT2G40840,AT4G33550,AT1G18250,AT4G11190,AT2G20450,AT3G16410,AT5G58670,AT5G02050,AT5G23820,AT2G39310,AT1G68740,AT1G23750,AT1G61890,AT1G23330,AT1G49940,AT1G65700,AT2G23120,AT3G25555,AT3G49160,AT3G05720,AT5G57440,AT5G09480,AT2G35930,AT3G23390,AT4G23680,AT1G75780,AT1G31510,AT1G10600,AT2G18210,AT2G42710,AT2G42760,AT4G25890,AT4G28940,AT5G37800,AT1G59860,AT2G27710,AT1G15460,AT1G11690,AT3G62760,AT5G24770,AT1G64650,AT1G73330,AT2G22170,AT2G43480,AT2G39510,AT2G15970,AT3G24830,AT5G05960,AT5G43420,AT5G63660,AT3G44870,AT1G04430,AT1G62975,AT1G20440,AT1G53300,AT1G13930,AT1G13970,AT1G65060,AT1G63720,AT5G16250,AT2G05990,AT4G20760,AT5G56760,AT5G04120,AT1G53240,AT1G16000,AT1G19570,AT1G23740,AT3G49960,AT2G34850,AT3G54960,AT3G15530,AT3G55980,AT4G13420,AT5G61790,AT1G63000,AT1G09160,AT1G32220,AT1G18300,AT1G17190,AT3G46230,AT2G22330,AT4G24140,AT5G40390,AT5G05410,AT5G47980,AT5G52280,AT5G55560,AT1G61930,AT4G15000,AT3G23530,AT1G08920,AT2G23630,AT2G27970,AT3G57520,AT3G54250,AT3G51740,AT3G50060,AT4G28840,AT4G35950,AT5G65280,AT5G17870,AT5G48300,AT5G22310,AT3G06030,AT5G15970,AT4G32330,AT3G52590,AT1G31710,AT1G03780,AT4G08685,AT5G37020,AT1G60770,AT2G19250,AT2G19310,AT2G01250,AT2G23050,AT3G47930,AT3G52390,AT4G34410,AT4G30220,AT4G29680,AT4G24340,AT4G11710,AT3G48930,AT1G29470,AT3G21800,AT2G43100,AT2G33620,AT4G01660,AT5G42860,AT5G22020,AT5G38000,AT2G36170,AT5G43690,AT1G10030,AT1G16960,AT1G04490,AT1G64170,AT3G24500,AT3G08990,AT4G36710,AT5G07030,AT5G24780,AT4G37760,AT2G44940,AT4G38460,AT4G14640,AT5G44350,AT3G51450,AT1G14060,AT2G48090,AT2G47950,AT2G38360,AT3G10930,AT3G19330,AT5G35490,AT5G51100,AT5G13840,AT5G36200,AT5G65360,AT3G10710,AT5G36140,AT1G79310,AT1G53760,AT1G11140,AT1G72450,AT1G04330,AT1G08400,AT1G11670,AT1G14200,AT1G48350,AT3G22690,AT3G10470,AT3G07750,AT3G49180,AT4G11990,AT4G38400,AT4G12030,AT5G37550,AT5G59480,AT4G31840,AT4G30280,AT3G50800,AT5G48010,AT1G68840,AT1G20680,AT1G70480,AT5G26800,AT2G33570,AT3G45160,AT3G29320,AT3G25780,AT3G23830,AT5G48000,AT1G67360,AT4G30810,AT5G02610,AT5G10380,AT5G48910,AT1G74500,AT1G64590,AT2G40080,AT3G18130,AT3G27540,AT5G13930,AT5G62220,AT5G56260,AT2G35860,AT1G77430,AT1G79470,AT3G03800,AT4G30650,AT4G11320,AT4G11280,AT5G58070,AT5G62350,AT5G13220,AT2G35240,AT1G70950,AT2G07720,AT2G27080,AT3G61100,AT3G27640,AT3G09940,AT4G20430,AT4G37700,AT4G23620,AT5G51040,AT5G53650,AT3G12580,AT4G37470,AT4G13550,AT2G35790,AT5G28570,AT4G11780,AT5G12950,AT1G42480,AT1G56670,AT1G12370,AT2G35450,AT3G55605,AT4G10620,AT5G04000,AT5G14580,AT5G52020,AT4G13770,AT4G25050,AT4G31795,AT3G32090,AT1G67740,AT1G07370,AT2G21960,AT3G57540,AT5G61130,AT5G22740,AT3G44750,AT1G21880,AT5G09590,AT2G46240,AT2G47890,AT2G46340,AT5G60890,AT1G55210,AT3G03780,AT2G41800,AT2G34050,AT3G23400,AT3G27650,AT4G19360,AT5G37770,AT5G40200,AT5G60960,AT3G12370,AT4G25340,AT4G29690,AT3G03060,AT1G76790,AT1G10455,AT5G47230,AT2G19740,AT2G22760,AT3G22310,AT3G50300,AT4G13290,AT5G17000,AT4G00370,AT5G64330,AT5G08020,AT2G35120,AT1G05210,AT3G01830,AT3G47540,AT5G63560,AT3G18940,AT4G28250,AT2G46650,AT2G42110,AT3G52740,AT2G10060,AT2G47110,AT3G26330,AT1G07135,AT1G66760,AT1G22880,AT4G26210,AT5G54470,AT5G17780,AT5G17460,AT5G63380,AT1G65860,AT2G22930,AT1G80820,AT1G79040,AT1G53840,AT2G33200,AT2G16005,AT2G18410,AT2G43550,AT4G32605,AT4G14420,AT4G22460,AT4G02500,AT3G55750,AT1G17100,AT1G59725,AT2G31340,AT1G42375,AT4G31780,AT4G12600,AT1G06430,AT1G07070,AT5G38010,AT5G44840,AT5G26260,AT1G30360,AT1G22150,AT2G19000,AT2G34610,AT2G18370,AT2G16660,AT2G15440,AT2G28000,AT3G19370,AT3G23170,AT3G02350,AT3G49090,AT4G29780,AT4G24380,AT5G05770,AT3G26060,AT5G20240,AT4G04830,AT2G33530,AT2G45750,AT1G18870,AT1G68120,AT4G17615,AT2G27840,AT4G34260,AT5G43150,AT5G23020,AT2G16350,AT2G32730,AT3G54810,AT2G29500,AT5G39320,AT1G55020,AT2G33580,AT2G46860,AT3G16080,AT5G64670,AT1G35250,AT1G30120,AT1G28480,AT4G07733,AT3G05060,AT5G52650,AT5G66460,AT5G38020,AT2G44120,AT2G26150,AT2G22970,AT1G64880,AT3G17270,AT3G33025,AT4G00810,AT5G26250,AT2G20470,AT1G70700,AT4G29670,AT5G58778,AT2G32060,AT3G16400,AT5G37700,AT3G54020,AT5G14110,AT1G61580,AT1G44350,AT1G58440,AT1G74310,AT2G18400,AT3G09200,AT3G58140,AT3G61820,AT4G38740,AT4G26510,AT5G59850,AT5G65470,AT5G02270,AT5G40480,AT3G16780,AT2G22500,AT2G01150,AT1G05550,AT1G32430,AT1G31700,AT1G17380,AT4G24110,AT5G66570,AT5G62360,AT5G42650,AT1G48750,AT2G02130,AT4G09990,AT3G30640,AT1G32450,AT3G58550,AT3G25190,AT3G61640,AT2G30040,AT4G14140,AT1G56660,AT1G49620,AT3G57450,AT5G52140,AT4G11210,AT1G78370,AT1G35720,AT1G78560,AT1G18140,AT4G09820,AT4G29700,AT4G33560,AT5G62670,AT5G44110,AT1G01100,AT5G15520 MA_COTYLEDON_LIGHT_DN Light down-regulated in Cot (TableS7 PubmedID:15888681) AT1G19540,AT1G23830,AT1G08830,AT2G45620,AT3G60140,AT3G07130,AT3G22570,AT3G08670,AT4G04220,AT5G03960,AT5G61730,AT3G13710,AT3G24020,AT2G14020,AT1G32700,AT1G70990,AT5G54190,AT2G02570,AT3G55770,AT3G56170,AT3G21330,AT3G19820,AT5G04810,AT5G52990,AT1G61170,AT1G17430,AT1G49600,AT3G20390,AT5G04470,AT2G16350,AT4G37070,AT4G14950,AT1G21910,AT1G36480,AT1G53035,AT2G40300,AT3G61260,AT4G11620,AT5G49100,AT5G04770,AT4G12520,AT2G18280,AT2G40940,AT1G17700,AT1G67910,AT2G39820,AT2G21655,AT5G38810,AT5G66030,AT5G15120,AT5G11420,AT4G22610,AT3G43660,AT4G11190,AT4G23400,AT2G25370,AT1G52190,AT2G21910,AT1G02840,AT1G37000,AT5G45470,AT4G16670,AT3G60200,AT3G03270,AT3G43760,AT3G49160,AT3G49300,AT3G26520,AT4G38860,AT1G19870,AT2G18210,AT3G55560,AT4G31250,AT4G23830,AT5G57240,AT5G65310,AT5G03860,AT5G44340,AT5G49800,AT1G30080,AT1G78160,AT1G79130,AT5G04370,AT2G42870,AT2G47930,AT2G39210,AT3G11760,AT3G57170,AT5G17010,AT5G03150,AT5G57480,AT5G10140,AT4G27240,AT4G37790,AT2G22900,AT1G10660,AT1G33050,AT4G37610,AT4G38470,AT5G12440,AT5G42410,AT1G78970,AT1G21820,AT1G29780,AT3G22240,AT5G54200,AT5G14740,AT2G37130,AT4G36880,AT5G20150,AT5G47780,AT2G41380,AT4G33070,AT1G72600,AT1G51200,AT1G29760,AT1G17190,AT1G03180,AT1G29400,AT1G11260,AT1G09415,AT2G43830,AT5G27890,AT3G13980,AT4G30410,AT5G14920,AT5G23530,AT5G67430,AT5G43290,AT1G10210,AT3G02040,AT1G30230,AT1G75240,AT1G05770,AT1G70220,AT2G23070,AT2G23460,AT5G54530,AT5G46900,AT1G76930,AT1G65670,AT2G13130,AT5G18490,AT5G58900,AT5G37170,AT3G48360,AT1G77210,AT1G60140,AT2G27860,AT2G42840,AT2G17460,AT3G63470,AT3G04730,AT4G13540,AT4G17080,AT5G59010,AT5G42860,AT5G06930,AT5G40590,AT5G03530,AT1G75580,AT2G46330,AT5G01330,AT3G46700,AT1G13590,AT3G24720,AT3G11580,AT3G57550,AT4G01290,AT5G07030,AT5G11280,AT3G23560,AT4G14640,AT5G56040,AT1G52660,AT5G12250,AT5G43060,AT1G79060,AT1G10120,AT1G71020,AT2G17500,AT3G12950,AT4G36930,AT5G49720,AT5G64570,AT5G26780,AT5G20630,AT4G16100,AT1G13640,AT4G30280,AT4G34770,AT3G22120,AT1G09460,AT1G32170,AT1G72870,AT5G10770,AT5G17330,AT1G77330,AT3G50330,AT5G65700,AT1G17230,AT1G10200,AT1G75180,AT1G48620,AT1G20520,AT1G26290,AT1G62310,AT1G41700,AT2G21140,AT3G45780,AT3G12310,AT3G46190,AT4G31370,AT5G49665,AT5G13990,AT3G50500,AT2G34770,AT4G33750,AT3G27050,AT3G17040,AT3G17820,AT1G63760,AT1G54910,AT1G42300,AT1G69500,AT3G22960,AT4G30370,AT4G14010,AT5G61590,AT5G02540,AT5G10430,AT4G11290,AT5G16590,AT1G01390,AT1G73120,AT1G70950,AT2G26650,AT3G59900,AT4G19140,AT5G22690,AT5G21060,AT4G05350,AT4G08030,AT2G05510,AT5G49080,AT1G09750,AT1G63690,AT1G29370,AT3G61700,AT3G16460,AT4G21840,AT4G14620,AT5G15230,AT4G38440,AT3G18780,AT1G67480,AT1G62045,AT1G60060,AT1G64670,AT2G45050,AT3G60030,AT2G35820,AT2G25260,AT1G18330,AT1G08500,AT5G10450,AT2G22680,AT5G41260,AT5G41080,AT5G60660,AT3G56480,AT1G05850,AT1G32230,AT5G32560,AT1G20900,AT1G15670,AT2G28670,AT2G40070,AT3G02800,AT3G60650,AT3G52250,AT4G17220,AT5G57655,AT5G19510,AT4G29690,AT5G05890,AT5G02360,AT1G78910,AT1G32240,AT1G14400,AT4G26940,AT4G14130,AT3G07340,AT5G38200,AT5G23450,AT1G74660,AT1G13960,AT3G02110,AT5G34835,AT5G23800,AT2G26390,AT5G07440,AT1G45130,AT1G02340,AT1G54680,AT3G10690,AT2G44740,AT2G01340,AT3G30180,AT4G23870,AT5G64330,AT5G57110,AT5G62260,AT5G43220,AT5G57660,AT4G23690,AT5G56540,AT4G33740,AT1G76760,AT1G01400,AT1G62480,AT1G44940,AT1G30330,AT5G05450,AT4G31380,AT4G16515,AT5G21020,AT1G26850,AT1G72070,AT5G25460,AT2G02680,AT3G13460,AT4G27310,AT5G67470,AT5G55010,AT5G11210,AT2G10890,AT2G21540,AT1G18290,AT1G12500,AT2G06200,AT3G18200,AT3G20710,AT3G13445,AT5G54470,AT5G23730,AT3G49860,AT5G62700,AT1G31920,AT1G31825,AT1G52110,AT2G14090,AT2G27190,AT3G10120,AT3G49930,AT3G53250,AT4G02090,AT4G38800,AT5G16560,AT5G64590,AT4G40080,AT4G36850,AT3G42520,AT1G05830,AT3G16640,AT4G01680,AT5G48430,AT5G26740,AT5G44440,AT1G64640,AT2G35750,AT2G36410,AT5G05190,AT1G17860,AT4G13660,AT1G60610,AT5G26260,AT1G61460,AT1G51940,AT2G25050,AT3G44240,AT3G42060,AT4G30190,AT5G52830,AT5G44660,AT5G14840,AT5G52250,AT3G21720,AT1G11000,AT3G21870,AT1G13260,AT1G53830,AT5G45180,AT1G04300,AT2G29980,AT2G30930,AT4G11050,AT4G17730,AT4G37330,AT4G16690,AT5G16370,AT5G55410,AT1G04680,AT3G25290,AT4G37870,AT1G04710,AT1G10910,AT1G01280,AT1G54420,AT1G61900,AT1G78440,AT1G64460,AT1G67590,AT1G22550,AT2G46130,AT3G29180,AT3G11550,AT4G35190,AT5G22500,AT5G23210,AT5G17550,AT5G53250,AT5G19520,AT3G52520,AT3G60070,AT4G12730,AT5G03545,AT1G76880,AT4G28470,AT4G10020,AT4G07530,AT1G55290,AT1G35250,AT1G21060,AT2G46310,AT2G31945,AT3G23930,AT4G31590,AT1G22330,AT2G14900,AT3G59690,AT3G53240,AT5G20650,AT1G06070,AT5G27210,AT5G47990,AT1G10460,AT1G47530,AT1G80830,AT1G33280,AT2G40570,AT2G36320,AT2G16060,AT4G08950,AT5G23860,AT1G62770,AT4G18210,AT1G77820,AT2G47000,AT1G64390,AT4G09160,AT4G31240,AT5G64410,AT1G15500,AT1G33170,AT3G43670,AT1G02640,AT1G09390,AT1G68670,AT1G28000,AT2G31900,AT3G60520,AT4G25580,AT5G44630,AT4G22810,AT1G02610,AT3G02170,AT3G08030,AT4G32460,AT5G60740,AT5G40890,AT1G12780,AT1G04380,AT1G74790,AT2G01480,AT2G38070,AT3G47420,AT4G14690,AT5G67060,AT5G02580,AT5G02480,AT5G66330,AT1G06360,AT1G15110,AT1G10140,AT1G09920,AT5G19260,AT2G31280,AT4G02470,AT4G28720,AT5G39080,AT1G36700,AT3G16180,AT3G10450,AT3G51900,AT1G62360,AT1G78720,AT1G14440,AT1G70430,AT5G53300,AT2G26660,AT2G21060,AT4G12880,AT4G27450,AT5G49700,AT1G10070,AT4G30290,AT3G28860 MA_HYPOCOTYL_LIGHT_DN Light down-regulated in Hyp (TableS7 PubmedID:15888681) AT1G27200,AT1G17970,AT2G31350,AT2G17350,AT2G45620,AT3G05990,AT3G60140,AT3G06170,AT4G04220,AT4G25140,AT4G29380,AT5G63180,AT5G35660,AT5G03230,AT5G03960,AT5G61730,AT4G40060,AT3G13710,AT3G24020,AT1G11530,AT1G56010,AT1G70990,AT1G48260,AT5G54190,AT2G45370,AT3G55770,AT3G19190,AT3G56170,AT4G05150,AT4G08290,AT4G02780,AT5G49710,AT5G39970,AT5G24730,AT5G65390,AT3G61000,AT3G48530,AT3G59260,AT5G09670,AT5G22900,AT1G57980,AT1G03230,AT1G74650,AT1G76410,AT1G26980,AT2G02370,AT2G33830,AT3G20390,AT3G05920,AT4G18965,AT4G32150,AT5G35200,AT5G60020,AT5G40690,AT1G74410,AT1G71030,AT1G58032,AT4G37070,AT1G53700,AT1G53035,AT2G17440,AT3G04530,AT3G15450,AT4G25710,AT4G35100,AT4G11620,AT4G04955,AT5G65040,AT5G04770,AT4G12520,AT2G18280,AT2G37750,AT1G44160,AT1G04400,AT1G67910,AT2G34730,AT3G49790,AT3G20250,AT3G48100,AT4G12690,AT4G38690,AT5G49450,AT5G15120,AT5G63800,AT4G23400,AT4G26740,AT1G28080,AT1G41750,AT1G23060,AT1G55810,AT5G47635,AT1G33055,AT2G22180,AT2G47600,AT2G18700,AT3G57720,AT3G02390,AT3G01770,AT3G51400,AT3G56820,AT3G20015,AT5G10610,AT5G59960,AT4G21130,AT2G15010,AT1G29280,AT2G45510,AT3G03270,AT1G12090,AT1G12440,AT1G22110,AT1G76220,AT1G03380,AT1G75130,AT1G17810,AT3G46130,AT3G10250,AT3G10040,AT3G26520,AT3G02550,AT4G19160,AT4G15610,AT4G32290,AT5G64180,AT5G50700,AT5G03180,AT1G03880,AT1G16170,AT5G66040,AT5G55770,AT2G11940,AT3G17540,AT4G20840,AT2G15890,AT4G31250,AT4G20110,AT4G30360,AT5G46040,AT5G57240,AT5G43520,AT4G10230,AT3G51840,AT1G65600,AT1G20380,AT1G64660,AT5G57330,AT2G30230,AT2G45210,AT3G16240,AT4G22250,AT4G01330,AT4G37890,AT4G38060,AT5G60420,AT4G01430,AT1G76990,AT1G72290,AT1G18470,AT2G14620,AT2G01850,AT2G38400,AT3G43960,AT4G37610,AT4G38470,AT5G48560,AT3G06850,AT1G66190,AT1G29520,AT1G20440,AT1G54870,AT1G13430,AT1G53165,AT1G63800,AT1G06980,AT1G75540,AT5G15650,AT2G02360,AT3G03870,AT3G07990,AT4G32480,AT5G12200,AT5G53660,AT5G66160,AT5G14740,AT5G04120,AT1G44800,AT1G27030,AT1G42470,AT2G17710,AT5G63190,AT1G36380,AT1G72830,AT4G28520,AT5G66590,AT5G57670,AT4G39090,AT1G10920,AT1G77125,AT4G02075,AT4G11300,AT2G39940,AT3G18150,AT1G78840,AT1G62510,AT1G72820,AT2G25590,AT2G28110,AT3G03470,AT3G15070,AT3G11930,AT5G19740,AT5G52430,AT5G16600,AT5G08350,AT5G54530,AT5G66052,AT5G46900,AT5G20620,AT4G27150,AT4G28460,AT4G17880,AT1G68710,AT5G20250,AT2G42040,AT3G27770,AT3G46610,AT5G14190,AT1G03210,AT1G04250,AT3G47340,AT1G23720,AT2G03590,AT1G32100,AT1G15740,AT1G73260,AT1G60140,AT2G21850,AT3G51720,AT3G27810,AT3G48810,AT4G19420,AT4G29270,AT5G12870,AT5G46050,AT3G45080,AT1G69140,AT1G68725,AT1G79380,AT1G28100,AT2G15810,AT2G39440,AT2G39570,AT2G16530,AT3G58940,AT4G20270,AT5G17420,AT5G01350,AT4G33150,AT4G26320,AT3G48020,AT1G10375,AT1G73660,AT5G25870,AT2G02080,AT2G17500,AT2G28160,AT3G22640,AT4G35750,AT5G49720,AT5G64570,AT4G29260,AT1G77690,AT3G30390,AT5G23230,AT1G25230,AT3G28050,AT1G03090,AT1G45015,AT1G31175,AT1G44770,AT5G19860,AT1G75500,AT1G80280,AT2G01660,AT2G43380,AT3G56310,AT3G04060,AT3G53410,AT4G00355,AT4G20140,AT4G05070,AT5G48670,AT5G49360,AT5G51520,AT4G30280,AT1G35410,AT1G34040,AT3G53420,AT3G32980,AT1G32170,AT4G30170,AT5G27320,AT2G33990,AT2G27430,AT2G04410,AT3G19430,AT3G27660,AT4G32860,AT5G65480,AT5G10770,AT5G51670,AT3G42220,AT1G20520,AT2G16750,AT2G21140,AT3G01930,AT5G19890,AT3G27050,AT3G28540,AT1G30760,AT1G25420,AT2G37090,AT2G19110,AT2G21460,AT2G25150,AT3G07870,AT3G60550,AT4G20990,AT4G36890,AT5G02540,AT5G10430,AT1G68250,AT5G16590,AT1G69490,AT1G67030,AT1G62440,AT2G20080,AT2G02710,AT2G22970,AT3G52480,AT3G23800,AT4G37700,AT5G07360,AT5G05460,AT5G07820,AT5G13130,AT5G52710,AT3G52490,AT3G54770,AT2G26640,AT4G40070,AT1G35950,AT5G28020,AT4G20250,AT5G23100,AT3G10020,AT4G21890,AT3G46000,AT1G47630,AT1G78110,AT1G62045,AT1G64670,AT2G26220,AT3G60030,AT4G07820,AT4G31750,AT4G28240,AT4G25780,AT1G19530,AT1G54100,AT1G49660,AT3G17420,AT3G61780,AT1G08500,AT1G05840,AT1G10550,AT1G76090,AT2G26240,AT3G16920,AT3G22190,AT3G26890,AT4G38770,AT4G12530,AT5G05750,AT5G41260,AT5G42590,AT5G60660,AT5G44120,AT5G66290,AT4G32940,AT5G56140,AT1G03110,AT3G44820,AT3G10580,AT3G05150,AT3G27270,AT4G32450,AT4G17220,AT4G13580,AT5G01250,AT5G01880,AT5G19120,AT5G59880,AT1G60010,AT3G61430,AT1G62980,AT3G07490,AT3G49210,AT1G05810,AT1G10020,AT1G07655,AT1G49500,AT1G68300,AT2G28490,AT3G19900,AT3G17790,AT4G35970,AT5G53190,AT1G13960,AT2G05540,AT1G27150,AT1G66780,AT2G46550,AT1G30770,AT2G44130,AT2G02560,AT2G02970,AT2G05580,AT2G31980,AT4G19950,AT4G23870,AT5G62260,AT5G56540,AT3G01670,AT3G24580,AT4G30270,AT1G21400,AT1G73220,AT1G01240,AT1G36980,AT1G26670,AT1G01180,AT5G26660,AT5G22050,AT2G37950,AT2G32300,AT2G24580,AT3G24740,AT3G26510,AT3G01110,AT4G02290,AT5G04460,AT5G47720,AT5G20490,AT2G39100,AT1G75830,AT1G61330,AT5G42030,AT4G34030,AT1G08890,AT1G72070,AT1G21780,AT1G70330,AT1G15350,AT2G23510,AT2G33790,AT2G40900,AT2G04800,AT2G03730,AT2G42400,AT3G07740,AT3G05250,AT3G51500,AT3G18260,AT4G30420,AT5G41330,AT5G47560,AT3G01400,AT3G45730,AT2G01530,AT2G21540,AT1G70830,AT1G10430,AT1G24560,AT1G22490,AT1G08590,AT2G48040,AT2G18050,AT2G37150,AT3G52060,AT3G13445,AT4G21810,AT4G13570,AT4G00150,AT5G42750,AT5G06690,AT5G23660,AT5G55860,AT5G21940,AT5G56100,AT5G23730,AT5G44250,AT4G19700,AT4G34680,AT1G47860,AT1G52880,AT1G28330,AT2G39400,AT3G16770,AT3G15890,AT4G02090,AT5G25160,AT5G51150,AT5G48720,AT5G54730,AT2G13770,AT4G08300,AT1G52750,AT1G74940,AT1G67190,AT2G21030,AT5G51810,AT3G50560,AT3G23880,AT3G55060,AT4G01680,AT4G09610,AT5G16250,AT5G14180,AT5G04750,AT4G25260,AT5G30545,AT5G43540,AT5G63590,AT5G26740,AT5G44440,AT5G23600,AT5G47450,AT1G18270,AT1G47960,AT2G22660,AT2G36410,AT5G35030,AT3G47300,AT3G02810,AT3G01220,AT3G58910,AT3G15510,AT4G10910,AT4G24630,AT4G13030,AT4G00840,AT5G60100,AT5G13655,AT5G25810,AT5G57970,AT5G44680,AT5G67140,AT5G48280,AT4G26060,AT2G01890,AT1G78290,AT4G13660,AT5G18080,AT3G47130,AT1G08630,AT1G80440,AT1G20620,AT2G26690,AT3G57840,AT3G42060,AT4G27390,AT4G23820,AT5G11920,AT5G02090,AT5G57740,AT5G62900,AT5G58500,AT1G72150,AT1G51170,AT3G51830,AT2G20670,AT2G04690,AT3G63210,AT3G48740,AT3G19553,AT3G18035,AT3G01230,AT4G39070,AT4G28040,AT4G35060,AT5G57400,AT5G05110,AT5G11720,AT1G04780,AT3G25290,AT4G21350,AT1G27230,AT1G33240,AT1G61900,AT1G18920,AT1G14890,AT1G64460,AT1G68360,AT1G68230,AT2G27140,AT3G55420,AT3G49020,AT3G52920,AT4G24100,AT5G22920,AT5G62280,AT5G23210,AT5G17550,AT5G53250,AT5G63760,AT3G13450,AT4G32780,AT1G70840,AT3G19410,AT5G08460,AT4G31910,AT1G01780,AT1G67940,AT1G80380,AT1G77120,AT1G70300,AT2G35680,AT2G25900,AT3G01690,AT3G52520,AT3G15580,AT4G12730,AT4G16190,AT4G28770,AT4G03570,AT4G34330,AT5G09440,AT5G58520,AT5G47370,AT5G55850,AT5G03545,AT2G23290,AT5G60850,AT1G20190,AT5G48160,AT5G04700,AT2G27360,AT5G07010,AT1G53910,AT1G10480,AT1G35612,AT1G08990,AT1G32450,AT4G20260,AT2G47160,AT2G01680,AT2G42890,AT2G15580,AT2G23410,AT2G45170,AT2G31945,AT3G60700,AT3G16690,AT4G09580,AT4G27470,AT5G16110,AT5G07080,AT5G54740,AT5G44130,AT5G22860,AT3G03000,AT5G67190,AT2G27920,AT3G59690,AT4G12570,AT4G21980,AT5G17290,AT5G52120,AT1G21680,AT3G62650,AT5G47990,AT1G01620,AT2G14870,AT2G36320,AT2G16060,AT3G15115,AT4G15650,AT5G57685,AT5G42560,AT5G53110,AT5G37790,AT4G29100,AT1G62770,AT3G26440,AT1G04310,AT2G23790,AT1G77820,AT1G50420,AT1G24440,AT1G36060,AT1G30370,AT1G15800,AT1G70690,AT1G14350,AT2G43050,AT2G24460,AT3G22750,AT3G62460,AT3G07800,AT3G18120,AT4G09830,AT4G10170,AT4G24220,AT4G34530,AT4G31240,AT4G24040,AT5G57510,AT5G07110,AT5G64410,AT1G15045,AT5G06200,AT3G42970,AT1G64330,AT4G20820,AT3G43670,AT1G13245,AT2G38800,AT2G31900,AT2G25000,AT2G03390,AT2G25930,AT3G48390,AT3G01520,AT3G42110,AT3G50620,AT3G26720,AT5G14780,AT5G46250,AT5G05690,AT5G59780,AT3G53990,AT4G35780,AT1G74840,AT1G70260,AT1G76460,AT3G54680,AT3G43230,AT3G58120,AT3G56350,AT3G02291,AT4G23880,AT4G36280,AT5G59090,AT5G12390,AT1G21360,AT2G24260,AT4G12470,AT5G56870,AT1G12780,AT1G79270,AT1G56720,AT1G22530,AT1G07648,AT3G54370,AT2G01480,AT2G15960,AT2G47860,AT3G20570,AT3G55230,AT3G16850,AT3G05157,AT3G49040,AT4G24230,AT5G02580,AT1G04040,AT1G10140,AT1G11910,AT3G55610,AT5G46860,AT4G16520,AT4G25570,AT4G36900,AT5G42870,AT4G35720,AT1G49130,AT3G26300,AT1G46768,AT1G47310,AT1G05570,AT4G33560,AT4G27450,AT4G24590,AT5G11000,AT5G14120,AT5G06980,AT5G57620,AT4G18780,AT4G19670 MA_ROOT_LIGHT_DN Light down-regulated in Root (TableS7 PubmedID:15888681) AT1G64740,AT1G12520,AT5G02650,AT1G09310,AT1G32350,AT3G60140,AT3G53480,AT5G35660,AT5G03230,AT3G13710,AT5G32430,AT1G80330,AT1G56010,AT5G16880,AT3G15910,AT5G65980,AT3G13610,AT3G03670,AT3G48530,AT5G39580,AT1G76410,AT2G33830,AT2G44370,AT3G46900,AT3G05690,AT3G53160,AT5G45490,AT2G44790,AT1G13600,AT1G02200,AT4G14360,AT3G61390,AT1G63750,AT3G14680,AT1G01580,AT1G18860,AT5G33360,AT2G21020,AT3G60420,AT4G24180,AT2G37750,AT1G51420,AT1G31290,AT1G42650,AT1G03790,AT1G02580,AT1G31880,AT2G32960,AT3G43280,AT3G47250,AT3G42140,AT3G29340,AT5G11370,AT5G49450,AT5G35690,AT5G15120,AT4G27300,AT1G21270,AT2G14510,AT1G69900,AT1G71140,AT2G13930,AT3G50950,AT4G17660,AT5G45470,AT2G15010,AT4G19840,AT1G29100,AT4G15610,AT4G13470,AT5G42830,AT1G03880,AT5G59080,AT1G61820,AT1G61590,AT1G30750,AT4G20110,AT5G24530,AT5G03860,AT5G43520,AT1G31100,AT1G53620,AT1G64660,AT1G27060,AT5G20740,AT5G04370,AT4G09110,AT5G45070,AT5G64750,AT5G49480,AT5G43770,AT5G39190,AT5G42150,AT5G49780,AT1G68100,AT1G66140,AT1G23870,AT2G38400,AT3G23130,AT4G16260,AT5G42010,AT5G27070,AT1G27170,AT1G52130,AT2G32690,AT4G01600,AT4G38390,AT4G36060,AT5G14740,AT2G17710,AT5G43780,AT5G35020,AT2G43610,AT1G52200,AT1G61120,AT1G51790,AT4G24510,AT4G30960,AT5G14670,AT3G44300,AT1G26990,AT1G30720,AT2G28110,AT1G67980,AT4G27150,AT4G05130,AT2G43570,AT1G15380,AT1G36640,AT1G67810,AT2G26400,AT5G24210,AT1G55790,AT1G74460,AT1G28100,AT2G26320,AT3G28910,AT5G61250,AT5G63160,AT4G19690,AT3G48020,AT1G68880,AT1G01560,AT2G44380,AT2G38830,AT2G29600,AT3G56400,AT4G05070,AT5G41090,AT4G25170,AT1G09460,AT2G22860,AT1G59870,AT4G14660,AT4G10510,AT4G13310,AT1G69560,AT1G41700,AT4G37530,AT2G43820,AT3G46190,AT4G31370,AT5G45500,AT5G09280,AT4G16150,AT4G19390,AT4G27260,AT1G26970,AT1G30760,AT2G43590,AT2G28780,AT4G29550,AT5G03060,AT1G17840,AT1G61230,AT1G13520,AT1G05080,AT1G49030,AT5G52720,AT5G07350,AT5G55020,AT5G55890,AT3G10985,AT5G65210,AT4G10420,AT4G40070,AT1G55780,AT1G67150,AT1G01140,AT3G54940,AT4G12290,AT5G57220,AT1G73800,AT1G65840,AT5G02020,AT2G38290,AT4G02520,AT4G07820,AT4G04700,AT4G28240,AT5G07490,AT5G38100,AT5G24230,AT5G51160,AT5G61010,AT1G19530,AT1G66600,AT4G10500,AT4G02240,AT1G17240,AT1G19400,AT1G43700,AT1G72200,AT5G10450,AT4G10850,AT4G30140,AT5G43550,AT2G28690,AT4G38420,AT3G59480,AT5G57655,AT5G59680,AT1G60110,AT1G47910,AT1G80110,AT3G22800,AT4G33020,AT5G38200,AT5G39670,AT5G24640,AT5G07770,AT1G25250,AT1G30770,AT2G18300,AT2G05580,AT2G30400,AT1G68530,AT2G32240,AT2G28960,AT1G07120,AT1G16260,AT2G26560,AT3G44170,AT4G25110,AT5G47580,AT5G55010,AT5G47560,AT3G23190,AT4G34300,AT4G09900,AT1G67110,AT1G34050,AT2G28570,AT2G45420,AT2G45180,AT5G23660,AT5G56100,AT1G18970,AT1G29670,AT1G41790,AT1G01725,AT1G13110,AT1G33430,AT2G39400,AT3G24503,AT3G16770,AT4G38540,AT5G04720,AT5G14380,AT5G48430,AT5G43370,AT1G18270,AT2G23270,AT3G26800,AT4G37390,AT1G02530,AT4G16920,AT1G63560,AT1G66200,AT3G42060,AT5G45180,AT1G51170,AT1G51620,AT2G47050,AT3G48740,AT3G51160,AT4G28040,AT5G47670,AT5G43210,AT5G24090,AT5G59700,AT3G24300,AT2G28890,AT3G11340,AT4G11650,AT4G35190,AT5G39610,AT5G44310,AT5G13320,AT5G36230,AT3G19410,AT1G05060,AT1G07170,AT4G25090,AT1G32450,AT1G51440,AT1G13480,AT2G40330,AT2G45170,AT5G16110,AT5G46090,AT5G43580,AT3G54040,AT3G24540,AT1G34180,AT5G29075,AT2G17820,AT4G17740,AT5G55170,AT5G51550,AT4G13950,AT1G21680,AT2G35280,AT3G18740,AT5G48410,AT4G23560,AT1G80830,AT2G36320,AT3G63380,AT4G33050,AT5G63020,AT5G05250,AT3G06990,AT4G31970,AT1G01640,AT2G35300,AT2G43050,AT3G07720,AT3G07600,AT5G60760,AT4G12550,AT1G15045,AT1G62290,AT4G27850,AT1G03890,AT3G47480,AT4G15270,AT5G38850,AT3G01290,AT2G29330,AT4G08380,AT1G56220,AT1G21970,AT1G70260,AT1G26790,AT2G05520,AT2G39380,AT2G28970,AT2G41100,AT3G46270,AT3G56060,AT4G23880,AT5G40780,AT5G40450,AT5G59090,AT5G11360,AT4G12470,AT1G09050,AT2G01360,AT1G12780,AT1G49160,AT1G62380,AT1G08050,AT2G38530,AT2G15960,AT3G50170,AT5G24270,AT2G47910,AT3G02620,AT3G14800,AT4G16370,AT5G22830,AT5G54620,AT1G49130,AT1G62415,AT3G57380,AT3G12700,AT4G27450,AT5G08380,AT5G06980,AT1G23120 MA_COTYLEDON_WL/D_UP Up-regulated in Cotyledon WL Vs. D (TableS8 PubmedID:15888681) AT3G45140,AT4G09480,AT1G52400,AT1G72115,AT4G13770,AT1G31580,AT1G16410,AT2G43100,AT5G24770,AT5G23010,AT1G70820,AT5G05250,AT5G54770,AT2G39030,AT1G23130,AT3G28270,AT5G24210,AT4G27570,AT5G24780,AT1G65860,AT4G27560,AT5G08760,AT5G38980,AT3G25760,AT1G67020,AT1G78370,AT5G67370,AT1G17420,AT2G43550,AT5G14200,AT3G01500,AT5G42650,AT2G34810,AT1G54020,AT3G58990,AT5G05600,AT1G76080,AT4G12030,AT3G14210,AT3G51450,AT4G37980,AT5G50101,AT5G01730,AT4G20990,AT5G42530,AT5G58770,AT2G37770,AT3G04210,AT4G21440,AT3G12145,AT5G24160,AT1G66090,AT3G57020,AT1G17380,AT5G12340,AT5G62360,AT4G20860,AT2G07720,AT5G52050,AT5G17000,AT5G25980,AT4G28780,AT5G42800,AT5G03170,AT1G66970,AT5G45850,AT5G59680,AT3G24540,AT4G36700,AT1G19670,AT3G05730,AT4G17090,AT1G74430,AT3G58940,AT5G63450,AT4G22520,AT3G02020,AT4G37800,AT3G46900,AT3G44970,AT2G46650,AT2G33850,AT3G48520,AT1G09340,AT3G48320,AT1G70700,AT1G23470,AT1G51090,AT1G54040,AT1G04350,AT3G57520,AT1G05800,AT2G43530,AT5G65010,AT1G32220,AT2G20880,AT2G37180,AT2G31790,AT4G34590,AT5G54710,AT1G18710,AT5G53450,AT1G19570,AT5G59320,AT5G56810,AT2G26150,AT3G02730,AT1G72450,AT1G51115,AT4G37930,AT4G24380,AT5G61420,AT1G32480,AT4G13490,AT5G16010,AT1G78020,AT1G24020,AT1G18060,AT5G58120,AT4G19530,AT4G15490,AT5G06870,AT1G43160,AT2G23600,AT1G56510,AT4G22890,AT1G72940,AT5G46510,AT3G60420,AT4G39940,AT3G44860,AT2G34490,AT1G62560,AT1G65400,AT5G45820,AT1G72520,AT2G46100,AT4G31480,AT2G42760,AT4G26530,AT1G14520,AT2G21330,AT1G29700,AT4G09910,AT5G13200,AT5G17521,AT1G23020,AT4G15920,AT2G05950,AT4G16370,AT4G05100,AT4G26520,AT2G37240,AT5G09220,AT5G24380,AT1G18590,AT3G26060,AT3G23840,AT5G10170,AT5G02940,AT1G52030,AT1G52000,AT5G17990,AT5G36790,AT4G16870,AT3G44840,AT4G29030,AT3G26290,AT3G25570,AT1G13650,AT5G35735,AT4G01900,AT1G21440,AT1G15980,AT4G17000,AT5G59250,AT4G09820,AT3G50820,AT1G11840,AT3G47960,AT5G05270,AT1G62510,AT3G63140,AT2G32730,AT4G30530,AT3G28930,AT5G27350,AT5G52320,AT2G43620,AT3G55040,AT5G64750,AT1G76130,AT3G02830,AT2G14750,AT5G20230,AT5G66190,AT1G63970,AT5G54170,AT5G24420,AT3G16860,AT4G04610,AT4G14950,AT4G21940,AT5G44580,AT4G21210,AT1G61190,AT1G55480,AT5G48300,AT1G62540,AT1G32900,AT2G30860,AT4G21780,AT5G41240,AT4G12480,AT4G10300,AT4G10000,AT4G02530,AT5G52810,AT2G39730,AT3G46970,AT5G15160,AT1G14250,AT5G09650,AT5G61010,AT1G03680,AT1G60260,AT3G28070,AT3G15840,AT2G39800,AT2G40840,AT2G38540,AT4G22250,AT1G11960,AT1G42970,AT5G47500,AT1G14830,AT4G34950,AT1G23310,AT2G46820,AT5G09480,AT2G27080,AT1G75280,AT2G15290,AT1G03310,AT3G14420,AT5G48850,AT3G16410,AT3G01290,AT4G36530,AT4G14040,AT5G55770,AT2G27290,AT3G54050,AT4G28250,AT1G22150,AT5G13220,AT5G55050,AT5G35170,AT1G13710,AT5G48880,AT1G65870,AT1G03630,AT1G23740,AT4G28280,AT3G61220,AT5G53050,AT3G54640,AT3G06880,AT2G43020,AT1G74730,AT5G57040,AT2G02270,AT1G74360,AT5G58390,AT5G50740,AT1G60590,AT1G65230,AT4G22710,AT2G31040,AT1G62320,AT1G29660,AT4G27520,AT4G37200,AT3G23400,AT3G03890,AT4G29670,AT5G43420,AT3G13110,AT3G28050,AT3G42140,AT3G52750,AT2G04400,AT2G25460,AT3G50950,AT4G38740,AT4G03280,AT5G14740,AT2G33620,AT4G30140,AT5G52120,AT4G21280,AT4G27300,AT5G52020,AT1G56190,AT1G56300,AT5G36920,AT4G17240,AT4G34190,AT1G14280,AT4G28840,AT3G22550,AT4G08170,AT4G36830,AT4G01360,AT5G63980,AT4G33680,AT4G18740,AT1G75460,AT4G21170,AT4G30650,AT1G52510,AT5G48930,AT1G24330,AT1G68010,AT1G80380,AT2G47590,AT3G44630,AT4G38460,AT1G70610,AT3G15110,AT2G41100,AT5G23820,AT1G78620,AT3G15520,AT2G42560,AT3G23670,AT4G03050,AT1G68740,AT2G02500,AT3G15530,AT4G36510,AT4G34410,AT5G65810,AT1G56500,AT5G35630,AT3G18290,AT1G65890,AT3G01830,AT5G64850,AT4G18810,AT1G03990,AT5G64040,AT1G60270,AT1G59960,AT1G05080,AT2G03530,AT1G09490,AT3G58010,AT5G38940,AT2G14290,AT4G03520,AT1G80820,AT5G13320,AT5G06590,AT4G17250,AT3G01230,AT4G19840,AT1G68830,AT1G32440,AT1G52880,AT3G53260,AT3G26840,AT5G39790,AT3G21890,AT2G22330,AT4G05180,AT3G23250,AT1G69840,AT1G78290,AT5G48470,AT4G02630,AT5G57330,AT4G33010,AT2G27660,AT1G44350,AT5G13190,AT1G08380,AT5G59070,AT5G12110,AT3G17540,AT1G09795,AT2G19310,AT5G51440,AT2G36970,AT5G17760,AT1G80450,AT1G32500,AT5G15450,AT4G13800,AT5G07460,AT1G01790,AT4G09590,AT1G14920,AT5G44310,AT5G10380,AT1G59790,AT3G25780,AT3G19710,AT4G33260,AT3G18890,AT5G61810,AT5G49780,AT2G21280,AT5G07020,AT3G14740,AT5G55280,AT3G16050,AT4G33510,AT3G24500,AT1G01570,AT1G34000,AT4G05110,AT4G31780,AT5G23510,AT5G22890,AT3G60690,AT5G34862,AT3G52960,AT2G21340,AT3G52180,AT1G61340,AT2G17660,AT1G73325,AT2G22500,AT4G28660,AT1G24140,AT3G52740,AT3G16280,AT3G14200,AT5G17670,AT4G09650,AT5G52580,AT1G34560,AT2G35070,AT5G22460,AT4G11320,AT1G54780,AT3G55120,AT4G25290,AT2G30360,AT5G41900,AT2G25080,AT2G33530,AT1G21500,AT3G14060,AT1G16080,AT1G02465,AT1G31230,AT2G10060,AT3G20370,AT5G38020,AT5G64080,AT1G68430,AT2G43560,AT1G75040,AT1G32990,AT2G40520,AT3G21230,AT1G15140,AT5G38710,AT1G33970,AT3G21260,AT2G32130,AT5G58260,AT1G21060,AT3G55800,AT2G32530,AT4G28025,AT1G54960,AT2G04700,AT1G77090,AT2G34420,AT4G03060,AT2G30570,AT5G13800,AT5G44870,AT2G09980,AT3G54020,AT1G65900,AT1G71290,AT1G21350,AT4G04640,AT2G36250,AT3G54890,AT3G54880,AT5G47840,AT1G30530,AT5G24060,AT4G29430,AT2G20570,AT3G03780,AT1G51820,AT2G23300,AT1G32450,AT5G35475,AT3G49680,AT4G17340,AT5G22620,AT5G13120,AT3G55330,AT3G07720,AT4G39540,AT3G18330,AT5G52970,AT5G44720,AT1G77490,AT3G44870,AT4G28590,AT4G01990,AT1G10370,AT4G31840,AT5G60890,AT1G78280,AT4G24830,AT5G14060,AT4G39950,AT3G54390,AT3G47250,AT2G16660,AT5G54180,AT4G27910,AT3G18560,AT3G43990,AT5G11880,AT1G59860,AT4G16920,AT1G58340,AT1G14410,AT4G38810,AT3G62530,AT4G24130,AT2G24820,AT4G17880,AT2G40460,AT2G47950,AT1G06680,AT5G49910,AT2G02810,AT4G04830,AT3G02840,AT1G13610,AT3G47480,AT4G36240,AT4G15790,AT5G01870,AT3G63160,AT3G06500,AT1G43670,AT3G14520,AT1G43560,AT1G07610,AT3G25600,AT5G35540,AT4G24720,AT2G19970,AT1G48030,AT3G21750,AT1G77990,AT5G35890,AT4G30810,AT2G26530,AT5G65280,AT4G14360,AT5G43150,AT5G01260,AT1G63750,AT2G30810,AT2G32190,AT1G11140,AT5G19370,AT4G24960,AT3G25870,AT1G12250,AT3G29030,AT2G32880,AT2G22880,AT2G33740,AT2G38290,AT5G52410,AT3G15790,AT3G19170,AT3G26570,AT1G22990,AT5G64460,AT5G38510,AT5G54390,AT1G69480,AT3G61870,AT4G25130,AT1G22500,AT1G08560,AT1G18250,AT3G56290,AT2G20920,AT1G57820,AT1G58420,AT2G30950,AT5G50890,AT1G74310,AT5G11590,AT2G37040,AT4G35630,AT2G05440,AT4G30993,AT5G44950,AT5G22800,AT1G27730,AT5G66230,AT1G23270,AT3G28510,AT5G47910,AT5G23850,AT5G12860,AT2G45660,AT1G07370,AT1G23840,AT1G14030,AT1G29040,AT3G29320,AT1G31170,AT1G28380,AT3G20390,AT5G65870,AT1G78140,AT3G56060,AT4G15320,AT5G51020,AT5G16250,AT5G22190,AT4G00320,AT2G30820,AT5G52690,AT4G23070,AT3G59260,AT5G13490,AT5G26930,AT5G40370,AT4G22780,AT3G25530,AT5G08640,AT3G03580,AT3G63380,AT3G24270,AT1G32070,AT2G48090,AT1G77430,AT1G76790,AT2G39250,AT1G06460,AT1G76620,AT5G40950,AT3G61390,AT2G34050,AT1G73060,AT4G09900,AT4G33050,AT4G22590,AT3G27925,AT1G20340,AT5G17870,AT1G06430,AT2G23670,AT5G22630,AT3G63410,AT1G20030,AT4G04980,AT1G66200,AT5G23020,AT4G24930,AT4G28031,AT1G73210,AT1G77670,AT1G17750,AT4G00670,AT1G17290,AT1G77590,AT3G57610,AT3G28540,AT4G02780,AT4G05330,AT1G18210,AT5G13700,AT1G12900,AT4G12800,AT1G26210,AT3G55880,AT4G11570,AT2G25890,AT4G24780,AT3G28520,AT1G78560,AT1G32080,AT1G47980,AT5G47220,AT1G23180,AT5G40170,AT1G15870,AT3G01670,AT4G04790,AT3G53190,AT2G35210,AT1G78915,AT4G14460,AT5G27520,AT2G39980,AT3G58920,AT5G50670,AT4G21860,AT5G24290,AT1G07600,AT4G16950,AT2G35940,AT1G31250,AT3G12580,AT4G01700,AT2G34120,AT1G74440,AT3G50910,AT5G39550,AT5G27360,AT5G02160,AT2G20270,AT1G66080,AT3G61170,AT3G19800,AT3G55840,AT4G37760,AT2G35840,AT1G51000,AT1G34420,AT3G03630,AT5G40540,AT3G19830,AT1G31190,AT3G07870,AT4G20760,AT1G79050,AT3G06050,AT3G27110,AT3G46490,AT1G26690,AT2G02320,AT5G59120,AT4G17300,AT1G67865,AT3G23990,AT3G15350,AT4G00050,AT1G01140,AT3G50675,AT3G59340,AT1G17950,AT5G22440,AT5G51000,AT3G21580,AT5G20900,AT3G57640,AT2G30390,AT5G02950,AT3G06730,AT5G40060,AT1G72640,AT2G32480,AT3G47540,AT4G23190,AT4G22990,AT2G42710,AT4G29210,AT4G27070,AT4G25210,AT1G65060,AT5G28450,AT4G17050,AT3G43280,AT1G23550,AT3G04030,AT5G60130,AT5G51820,AT1G35560,AT2G29600,AT2G35290,AT2G30770,AT3G44480,AT2G20870,AT1G64680,AT3G09440,AT4G28750,AT1G63610,AT4G29400,AT3G13470,AT5G63700,AT3G44750,AT1G13930,AT3G57450,AT2G05310,AT1G56340,AT2G22180,AT5G27380,AT3G51740,AT3G50060,AT1G19950,AT1G16400,AT5G46110,AT1G08050,AT1G44575,AT5G46730,AT5G42980,AT3G21470,AT1G73800,AT5G17630,AT1G03780,AT4G02770,AT4G23880,AT2G21130,AT3G23580,AT2G15580,AT2G46150,AT1G01560,AT3G50930,AT1G61890,AT5G17830,AT5G23060,AT1G76450,AT1G66160,AT5G63800,AT1G30120,AT5G41970,AT4G36220,AT4G07733,AT2G24580,AT4G38970,AT1G69230,AT1G23750,AT1G77450,AT3G06030,AT5G55120,AT1G62415,AT1G51440,AT5G17350,AT5G07770,AT1G27350,AT3G52390,AT5G26000,AT1G31700,AT1G50900,AT5G01530,AT1G52130,AT1G16720,AT4G32780,AT5G13750,AT1G28480,AT1G22880,AT1G14060,AT3G23830,AT1G63720,AT5G11070,AT2G26900,AT3G12700,AT1G53890,AT1G65560,AT2G47060,AT5G15080,AT5G08380,AT1G67360,AT3G25500,AT1G18870,AT2G41710,AT1G32550,AT5G51100,AT1G56250,AT5G64530,AT5G02790,AT5G66570,AT1G61520,AT5G06530,AT3G21800,AT1G56600,AT5G28570,AT5G58778,AT1G62180,AT1G10960,AT2G33580,AT1G33590,AT3G18080,AT3G53160,AT1G79480,AT4G30660,AT5G45060,AT4G13550,AT1G49750,AT3G45160,AT1G56660,AT1G78490,AT2G26640,AT3G27540,AT3G08990,AT5G62630,AT5G37550,AT5G01040,AT2G26840,AT3G49630,AT1G49410,AT1G04420,AT4G32605,AT1G35680,AT1G16630,AT1G01580,AT3G58910,AT5G53880,AT2G39100,AT4G22240,AT1G75350,AT5G47670,AT2G23270,AT4G37910,AT5G09660,AT2G20260,AT1G52720,AT3G18620,AT5G24090,AT1G31710,AT2G28790,AT2G06520,AT2G41680,AT2G34860,AT1G31330,AT5G13930,AT4G36710,AT1G68590,AT3G07800,AT5G22050,AT1G69700,AT4G30490,AT5G39670,AT2G14620,AT2G29340,AT1G47960,AT5G35490,AT2G27970,AT3G04710,AT2G42110,AT4G34290,AT3G27640,AT5G64670,AT2G23910,AT3G05720,AT4G18010,AT5G65360,AT1G72280,AT5G23660,AT5G65990,AT1G59950,AT2G21460,AT4G13010,AT5G49480,AT1G55670,AT3G17270,AT2G35450,AT5G59780,AT4G13170,AT5G44780,AT1G52230,AT2G21850,AT5G12890,AT2G23170,AT5G42010,AT4G02520,AT1G20815,AT1G79380,AT2G22250,AT1G61580,AT2G47600,AT5G65470,AT3G23295,AT1G65700,AT5G09590,AT2G46240,AT5G63560,AT4G24140,AT4G30220,AT2G20450,AT3G07490,AT1G02560,AT5G07080,AT1G17100,AT2G01110,AT3G55060,AT2G17220,AT2G46860,AT1G23330,AT5G08050,AT5G06320,AT3G06700,AT2G35240,AT1G77060,AT5G07090,AT3G58140,AT2G44580,AT1G18540,AT5G56940,AT3G18940,AT4G21130,AT1G51680,AT3G46230,AT5G15090,AT5G04140,AT1G20310,AT1G80110,AT5G59480,AT3G18120,AT4G24180,AT1G63880,AT4G23220,AT1G78070,AT5G46450,AT3G13610,AT4G11280,AT4G23180,AT2G38140,AT1G15460,AT4G12290,AT3G14680,AT1G06650,AT3G27650,AT4G13430,AT3G22690,AT1G26970,AT1G51620,AT3G51160,AT5G67140,AT1G76680,AT3G25250,AT2G33790,AT4G19420,AT4G29410,AT3G16080,AT2G16750,AT2G47890,AT5G48360,AT1G80530,AT4G02240,AT5G22530,AT2G05620,AT3G44590,AT4G35480,AT2G43510,AT2G01850,AT4G17615,AT2G22760,AT2G19250,AT3G16770,AT3G26330,AT2G02360,AT5G15650,AT2G04800,AT2G32240,AT5G23370,AT2G02740,AT1G21880,AT5G15520,AT4G31550,AT2G26740,AT4G19810,AT1G71140,AT1G42470,AT2G43590,AT3G32090,AT5G23310,AT5G43540,AT4G37470,AT1G70260,AT1G48750,AT5G02240,AT3G05060,AT4G12310,AT3G25190,AT4G30420,AT1G11580,AT2G43570,AT2G21030,AT1G53240,AT3G58790,AT1G80330,AT2G29500,AT5G28520,AT3G08740,AT3G16920,AT5G51040,AT4G19980,AT1G58602,AT1G08290,AT2G27920,AT1G69900,AT5G45775,AT4G24920,AT3G56910,AT2G27710,AT4G01050,AT3G58550,AT1G69140,AT3G04400,AT5G04720,AT5G58670,AT2G36170,AT5G28510,AT5G19220,AT5G23070,AT4G14320,AT3G18130,AT3G59060,AT2G21170,AT1G59725,AT5G36200,AT3G33025,AT1G66600,AT3G51820,AT4G19020,AT3G56340,AT4G37410,AT4G31820,AT1G61930,AT3G59760,AT5G53750,AT3G01280,AT1G35410,AT4G12600,AT3G55750,AT5G62220,AT4G16260,AT4G29700,AT2G43030,AT1G22490,AT5G02610,AT1G14780,AT5G14580,AT3G56940,AT2G23120,AT4G13420,AT4G25340,AT3G10710,AT1G29100,AT1G79470,AT1G49620,AT3G55980,AT2G23930,AT1G05010,AT5G08020,AT3G49570,AT5G14910,AT3G57840,AT5G23100,AT5G51160,AT4G40070,AT4G29070,AT4G34330,AT1G13970,AT1G30750,AT5G61790,AT1G27030,AT3G52590,AT5G35030,AT5G48720,AT2G47050,AT5G14150,AT1G04270,AT2G16900,AT1G64880,AT3G49180,AT3G50620,AT1G26880,AT5G22860,AT1G54090,AT1G23220,AT5G04700,AT5G48480,AT1G08660,AT5G02050,AT5G13840,AT3G03800,AT5G56670,AT3G57720,AT5G57440,AT2G29530,AT2G13770,AT3G49960,AT3G58660,AT3G62760,AT2G30490,AT5G22830,AT2G47090,AT3G48740,AT2G24850,AT1G07135,AT5G04000,AT2G22420,AT1G70480,AT5G54270,AT3G03670,AT1G14040,AT1G78210,AT5G20240,AT5G47930,AT5G11740,AT3G16690,AT3G22750,AT1G62980,AT4G14420,AT3G26080,AT1G73480,AT1G27200,AT5G44350,AT3G03060,AT3G61820,AT5G40480,AT3G19900,AT3G48500,AT5G38000,AT3G17110,AT1G18970,AT2G01250,AT4G17660,AT2G05990,AT4G00810,AT3G48930,AT5G55560,AT4G11710,AT5G04590,AT5G52650,AT2G39380,AT2G33200,AT2G01180,AT3G55510,AT2G47910,AT4G08290,AT5G59850,AT1G01100,AT2G43380,AT1G67110,AT5G25870,AT2G35930,AT5G08460,AT5G08350,AT2G18400,AT1G06830,AT1G74940,AT5G28590,AT4G26780,AT1G79850,AT3G28500,AT1G09850,AT2G32960,AT2G15960,AT3G23190,AT3G12370,AT1G35310,AT3G07110,AT2G23510,AT3G26830,AT2G32060,AT2G16280,AT1G67940,AT1G31510,AT5G37700,AT5G33320,AT1G42375,AT5G07350,AT3G61640,AT5G58520,AT5G43030,AT2G37030,AT1G22110,AT3G04840,AT1G01180,AT4G31750,AT3G07750,AT5G55840,AT2G35090,AT3G50760,AT2G21960,AT3G18740,AT5G22900,AT5G34800,AT5G56260,AT4G20430,AT3G61100,AT5G03060,AT4G27150,AT2G22470,AT4G24220,AT5G48670,AT2G05520,AT2G27550,AT1G68250,AT1G16960,AT1G01240,AT5G64940,AT3G02810,AT3G10595,AT3G23390,AT1G51950,AT4G13570,AT5G26800,AT1G68725,AT1G48630,AT1G72830,AT1G11670,AT3G16780,AT5G58500,AT1G17970,AT4G26230,AT4G35970,AT5G08040,AT1G64170,AT1G01470,AT4G24770,AT1G31090,AT3G25555,AT3G09200,AT1G07070,AT3G54810,AT1G30720,AT4G35950,AT5G10260,AT2G04390,AT4G40060,AT1G12240,AT5G47700,AT1G31650,AT1G54240,AT1G76420,AT5G06110,AT1G78630,AT1G14200,AT4G17740,AT3G18260,AT5G01250,AT1G19180,AT2G25210,AT1G13520,AT4G27390,AT1G04330,AT1G09050,AT2G36580,AT1G30370,AT3G47300,AT1G66760,AT4G15650,AT2G27430,AT1G67700,AT1G18020,AT3G15810,AT5G10130,AT4G23620,AT3G24300,AT2G31340,AT3G07600,AT2G25920,AT1G03110,AT2G32690,AT1G35290,AT1G74410,AT1G61820,AT2G35120,AT4G28940,AT4G31985,AT1G28390,AT2G01680,AT5G54510,AT3G27660,AT4G26210,AT4G01250,AT3G62460,AT1G10600,AT2G22210,AT5G66052,AT5G58960,AT1G42480,AT1G51850,AT1G11690,AT1G09760,AT1G05840,AT5G56760,AT5G48760,AT1G62380,AT3G19410,AT5G16600,AT1G79040,AT3G56400,AT4G28460,AT5G50730,AT2G45750,AT3G49090,AT1G65840,AT2G04370,AT4G36900,AT1G51170,AT1G53760,AT3G42220,AT1G53300,AT2G27140,AT5G17290,AT1G50660,AT2G45870,AT1G79550,AT1G23120,AT5G24640,AT1G67740,AT5G13650,AT5G05770,AT1G17240,AT4G10340,AT4G11990,AT4G32290,AT3G26650,AT3G51720,AT5G15970,AT2G28690,AT1G31175,AT5G11360,AT2G30040,AT2G35790,AT3G50560,AT5G62390,AT5G43620,AT3G43600,AT5G24230,AT5G55860,AT5G28670,AT3G47930,AT2G37600,AT5G52870,AT2G41800,AT2G31470,AT3G07770,AT2G37270,AT5G28020,AT1G48920,AT3G22800,AT2G18410,AT3G19370,AT3G59250,AT3G53890,AT2G16530,AT3G19330,AT1G10920,AT2G39460,AT2G17820,AT4G30330,AT5G44840,AT2G25590,AT5G38100,AT3G62230,AT1G09160,AT1G33350,AT4G38410,AT3G09390,AT5G22020,AT1G48350,AT3G15580,AT4G33020,AT1G79270,AT3G20570,AT2G21580,AT5G58810,AT1G28080,AT2G23410,AT5G60850,AT1G15380,AT3G06170,AT4G20220,AT1G66580,AT2G18550,AT4G26060,AT2G43480,AT4G32480,AT1G09780,AT1G70600,AT1G70130,AT4G29780,AT1G80280,AT4G25890,AT1G42300,AT5G63160,AT1G68945,AT1G04780,AT5G48280,AT5G42030,AT3G50170,AT1G15440,AT4G18100,AT2G01290,AT5G23960,AT4G20270,AT5G55170,AT1G51420,AT4G25050,AT5G23740,AT1G74980,AT1G16000,AT3G15890,AT1G42310,AT5G59700,AT2G26240,AT1G32060,AT1G23720,AT5G23600,AT4G37700,AT4G12550,AT4G21990,AT2G45220,AT1G30360,AT1G08400,AT1G26420,AT2G44120,AT4G26740,AT5G13655,AT1G63650,AT3G49430,AT2G26400,AT3G46270,AT1G41870,AT3G28900,AT5G02090,AT1G03230,AT2G17350,AT5G61780,AT3G57050,AT2G37190,AT5G65480,AT5G43690,AT1G80270,AT5G14120,AT3G26720,AT3G22850,AT3G24830,AT5G57400,AT3G57540,AT4G29680,AT4G24630,AT3G48810,AT1G57980,AT5G44680,AT3G15990,AT5G51810,AT3G51830,AT3G18830,AT2G38830 MA_COTYLEDON_WL/D_DN Down-regulated in Cotyledon WL Vs. D (TableS8 PubmedID:15888681) AT5G44130,AT5G17420,AT2G38360,AT1G01120,AT1G80300,AT1G32450,AT1G01610,AT5G45110,AT1G71200,AT4G10500,AT4G36280,AT1G30580,AT1G68880,AT5G52280,AT4G29080,AT5G59960,AT2G27840,AT5G14110,AT1G11460,AT4G29550,AT1G78000,AT3G19970,AT1G02580,AT5G60020,AT3G43230,AT4G15000,AT4G27470,AT5G05110,AT4G01660,AT2G37090,AT4G11780,AT1G13110,AT1G37130,AT1G44930,AT4G18780,AT5G47635,AT4G25110,AT5G05590,AT1G18470,AT1G58440,AT4G03570,AT2G39510,AT3G16400,AT1G10030,AT4G37390,AT5G13510,AT1G55020,AT1G05210,AT3G03470,AT1G04490,AT1G73220,AT5G41330,AT3G13450,AT1G53165,AT1G44800,AT4G14660,AT5G65980,AT1G56580,AT3G44170,AT5G13630,AT5G48910,AT4G11650,AT5G42590,AT2G39310,AT2G34850,AT4G17600,AT5G16130,AT5G14380,AT3G10930,AT1G21310,AT2G36160,AT3G42970,AT1G10455,AT3G07740,AT2G29330,AT3G22310,AT5G37770,AT4G05130,AT1G48390,AT4G00840,AT2G15440,AT1G64740,AT4G24110,AT1G68530,AT4G00370,AT3G63210,AT2G01150,AT2G23630,AT3G62250,AT1G33240,AT2G28960,AT1G68230,AT3G05250,AT3G14600,AT1G68300,AT4G20250,AT4G38420,AT2G28000,AT5G07360,AT2G26560,AT5G45490,AT1G13245,AT2G19740,AT5G09530,AT3G53410,AT2G44370,AT5G15530,AT2G28110,AT1G49160,AT5G52430,AT1G75860,AT5G55850,AT4G08685,AT5G39580,AT5G16540,AT2G38230,AT1G47760,AT2G01660,AT1G76220,AT4G30360,AT2G19730,AT2G21020,AT3G24740,AT3G10470,AT2G02370,AT5G52720,AT2G39440,AT3G09500,AT3G25830,AT2G25150,AT2G35680,AT2G42220,AT3G11930,AT2G37950,AT5G65040,AT1G76160,AT5G02450,AT1G68710,AT1G75130,AT1G69560,AT5G09670,AT3G45080,AT1G65260,AT1G36380,AT4G19700,AT4G02280,AT5G63380,AT4G31970,AT2G37880,AT5G59520,AT5G43780,AT1G25420,AT5G36140,AT1G79140,AT5G20290,AT5G51550,AT3G54680,AT1G53840,AT2G18370,AT5G12950,AT4G21870,AT3G24503,AT1G68100,AT4G14630,AT2G34730,AT1G32430,AT5G24530,AT3G59480,AT2G28160,AT2G40900,AT5G49710,AT4G24340,AT5G54730,AT2G41880,AT1G10020,AT5G67080,AT5G47720,AT2G14860,AT5G27320,AT4G21890,AT5G02020,AT5G05410,AT2G37750,AT4G01600,AT2G33990,AT1G63360,AT3G03000,AT3G21240,AT3G52920,AT5G01880,AT3G54040,AT4G23680,AT3G10580,AT1G49030,AT1G70690,AT5G38850,AT1G14120,AT5G04460,AT3G19430,AT1G68120,AT4G13470,AT1G54000,AT2G35300,AT1G10375,AT2G47110,AT1G70330,AT2G16430,AT4G10170,AT3G51400,AT2G03390,AT4G27720,AT3G46130,AT1G54100,AT4G10620,AT4G12530,AT5G57740,AT5G60960,AT3G60700,AT1G18300,AT5G40200,AT4G10510,AT3G61000,AT2G42400,AT4G20840,AT4G26510,AT5G20740,AT1G53620,AT1G20440,AT1G44770,AT2G45420,AT4G36890,AT1G58270,AT5G12870,AT4G31910,AT1G35647,AT3G20260,AT2G46340,AT1G26930,AT2G39570,AT5G17780,AT5G52140,AT4G00355,AT4G13930,AT3G15910,AT3G56820,AT2G32220,AT2G15970,AT1G55790,AT5G67190,AT5G20490,AT3G04290,AT5G45070,AT5G06690,AT2G28490,AT1G73330,AT2G34610,AT5G62300,AT2G35860,AT3G53990,AT5G10610,AT2G01530,AT4G38060,AT2G43610,AT1G20380,AT3G54250,AT2G22970,AT2G02710,AT4G16150,AT3G01930,AT5G12390,AT1G34040,AT3G28220,AT5G66040,AT2G35260,AT5G37990,AT1G60770,AT4G29260,AT4G24590,AT5G20070,AT3G48100,AT3G27810,AT3G22190,AT4G14260,AT2G23790,AT4G19670,AT5G43370,AT4G19690,AT1G45015,AT4G28770,AT5G17460,AT1G64590,AT5G65210,AT1G28570,AT2G14510,AT2G39940,AT5G57220,AT1G66190,AT4G25090,AT1G18270,AT5G46430,AT1G63560,AT2G38800,AT1G61330,AT2G28890,AT1G23850,AT5G11720,AT1G27150,AT3G32400,AT4G02230,AT1G08920,AT1G26670,AT4G19360,AT5G12200,AT5G24270,AT5G40780,AT3G05690,AT3G09630,AT2G43820,AT5G60670,AT5G09280,AT1G60110,AT4G39200,AT2G22860,AT2G13930,AT1G67190,AT3G19553,AT1G15045,AT1G21780,AT5G16880,AT5G35690,AT4G35780,AT2G48040,AT4G34870,AT1G54870,AT2G17710,AT3G02291,AT4G25730,AT2G02750,AT5G61110,AT1G62290,AT3G01110,AT4G39840,AT1G76990,AT4G04700,AT5G46860,AT4G05150,AT5G47560,AT5G53110,AT4G20820,AT1G29520,AT3G14800,AT3G56310,AT4G02500,AT4G31795,AT2G20470,AT1G11925,AT1G31100,AT4G34260,AT5G51750,AT1G47310,AT1G49940,AT2G39400,AT5G19860,AT3G27270,AT3G26890,AT5G61130,AT4G10910,AT5G30584,AT5G40390,AT1G59124,AT1G49500,AT3G19190,AT5G42150,AT3G01400,AT1G30760,AT1G13480,AT4G30960,AT1G32100,AT5G02650,AT3G02000,AT5G66290,AT1G05060,AT1G18920,AT5G56140,AT4G25170,AT2G03730,AT5G56330,AT1G15740,AT5G63590,AT1G55780,AT1G03380,AT2G40080,AT3G04530,AT4G20710,AT1G13600,AT5G05750,AT5G26250,AT1G51840,AT1G18860,AT3G22640,AT3G02350,AT3G30390,AT1G64650,AT5G63180,AT4G09580,AT1G59870,AT4G29100,AT1G27060,AT1G03880,AT2G30230,AT1G35612,AT3G51500,AT1G10430,AT1G21970,AT4G25570,AT2G37150,AT4G15270,AT3G62650,AT1G67150,AT4G09110,AT3G50300,AT3G27850,AT1G28290,AT4G21350,AT1G69530,AT4G08300,AT1G01725,AT4G34680,AT4G21980,AT1G63940,AT4G19390,AT5G04750,AT1G63000,AT3G44820,AT1G21680,AT1G43330,AT1G78840,AT4G26930,AT4G27850,AT5G36090,AT2G28780,AT3G22790,AT2G44940,AT5G66160,AT1G28100,AT1G34180,AT5G52310,AT3G20015,AT5G63020,AT5G59080,AT1G74890,AT1G51790,AT1G12370,AT2G45510,AT5G46090,AT4G07820,AT3G10250,AT5G42560,AT2G45370,AT1G70840,AT3G55420,AT5G60100,AT2G02970,AT3G03870,AT2G47860,AT5G45340,AT1G55210,AT2G19000,AT3G54960,AT5G34990,AT1G27170,AT3G30640,AT4G05070,AT4G02940,AT1G77125,AT2G02560,AT5G61250,AT4G38690,AT1G19410,AT2G23320,AT1G16260,AT5G40110,AT4G36060,AT3G19550,AT3G61430,AT2G31350,AT3G05157,AT5G47580,AT3G55605,AT4G09990,AT3G53420,AT4G37530,AT5G58070,AT1G56670,AT2G02130,AT4G10420,AT5G55020,AT1G49290,AT1G72200,AT5G40690,AT1G24967,AT1G54560,AT4G12570,AT3G50800,AT2G04410,AT5G46250,AT1G29470,AT4G38540,AT2G38390,AT5G42830,AT4G13310,AT4G25710,AT5G48560,AT5G37800,AT5G30480,AT1G31880,AT5G03230,AT1G36640,AT2G23290,AT1G70410,AT3G45960,AT1G32350,AT3G06850,AT4G07640,AT1G03210,AT1G29670,AT5G11000,AT1G34050,AT2G20080,AT5G35660,AT4G38390,AT3G22830,AT1G47910,AT1G05570,AT4G21810,AT1G76930,AT2G46420,AT1G63800,AT1G73660,AT4G09610,AT3G46000,AT5G40450,AT3G49020,AT1G17840,AT2G24460,AT2G33570,AT1G14350,AT2G17440,AT4G02075,AT1G03360,AT2G10650,AT1G33430,AT5G14370,AT5G42870,AT1G41790,AT3G42110,AT4G13950,AT2G41840,AT4G32150,AT4G29380,AT2G15810,AT5G62350,AT1G04430,AT2G30400,AT2G22660,AT5G43580,AT1G68360,AT5G37020,AT1G09310,AT1G29280,AT1G42650,AT3G18150,AT5G62900,AT1G65600,AT5G47370,AT4G14140,AT1G18140,AT1G37200,AT3G61780,AT5G35200,AT5G64180,AT1G64330,AT5G46040,AT5G45500,AT5G54620,AT4G32940,AT5G49630,AT5G62670,AT1G53910,AT1G07648,AT1G12440,AT1G35720,AT1G11910,AT5G19890,AT5G62700,AT3G52490,AT1G74460,AT1G79310,AT3G57380,AT1G73260,AT1G24520,AT4G20110,AT3G48020,AT4G16190,AT1G03840,AT5G57970,AT2G34430,AT1G62460,AT2G15010,AT5G26660,AT5G29060,AT4G34300,AT1G72820,AT3G54940,AT2G38400,AT5G41070,AT5G27190,AT3G42990,AT4G16520,AT1G77760,AT5G63760,AT1G01620,AT4G33550,AT2G28570,AT5G57510,AT4G24040,AT4G32450,AT1G16170,AT2G22930,AT3G48530,AT4G01850,AT1G24440,AT4G22020,AT2G17170,AT1G80340,AT5G32430,AT1G36980,AT1G11530,AT5G43210,AT3G16850,AT1G75500,AT5G09980,AT1G56720,AT4G24100,AT5G57685,AT4G28080,AT4G23560,AT1G41750,AT3G43560,AT5G07820,AT4G01330,AT1G19400,AT3G56350,AT2G38750,AT3G44300,AT1G52200,AT3G04060,AT5G14190,AT1G59720,AT3G15070,AT5G60420,AT3G01690,AT3G05990,AT1G61230,AT5G53190,AT5G20250,AT1G70300,AT3G47980,AT1G66140,AT5G14780,AT2G40330,AT4G32330,AT2G01890,AT5G26340,AT2G45210,AT2G16005,AT2G19110,AT2G42890,AT4G38400,AT4G10230,AT2G32990,AT1G50420,AT3G08940,AT2G16740,AT4G27870,AT3G20250,AT1G24560,AT1G53700,AT2G24260,AT5G41090,AT1G01640,AT3G26440,AT5G05460,AT5G43520,AT5G36860,AT1G56010,AT3G45730,AT3G19820,AT5G35020,AT4G17220,AT1G10910,AT4G13290,AT5G44630,AT3G53140,AT4G34710,AT1G15290,AT3G23170,AT3G49910,AT1G71030,AT5G32560,AT3G46610,AT2G23070,AT5G02360,AT1G32230,AT5G66030,AT5G26740,AT3G52250,AT3G53240,AT1G48620,AT2G27860,AT5G14180,AT5G23450,AT5G48010,AT1G47530,AT2G17460,AT1G04300,AT4G08030,AT1G14440,AT2G25000,AT1G47630,AT3G51900,AT4G19950,AT2G13130,AT3G46700,AT4G07530,AT5G57110,AT5G62260,AT3G17040,AT1G07120,AT1G77210,AT1G77820,AT2G46330,AT5G67470,AT5G16560,AT1G74840,AT1G76760,AT2G34770,AT1G62975,AT5G41260,AT3G60200,AT3G26800,AT2G40570,AT4G26940,AT5G11280,AT4G38800,AT2G14090,AT3G55560,AT5G29075,AT5G57480,AT4G14950,AT5G35120,AT2G23460,AT5G66460,AT2G02570,AT5G23860,AT1G75830,AT4G25140,AT5G47230,AT1G26990,AT2G28970,AT3G51840,AT4G01290,AT4G40080,AT2G18700,AT2G27190,AT3G61260,AT3G23130,AT3G46190,AT5G20630,AT2G03590,AT5G02480,AT1G52110,AT5G54530,AT1G29760,AT2G26690,AT4G27240,AT5G13130,AT1G41700,AT5G55890,AT5G10140,AT2G41380,AT5G49080,AT5G10450,AT3G43960,AT1G74650,AT1G32240,AT1G04400,AT1G10460,AT4G24510,AT4G20140,AT3G18035,AT1G05850,AT2G40070,AT1G25250,AT4G14620,AT3G17820,AT5G44660,AT1G17230,AT5G43220,AT1G14400,AT2G10890,AT5G42750,AT1G51200,AT3G42650,AT1G31920,AT1G63760,AT1G64460,AT5G39320,AT1G68510,AT4G09160,AT1G10660,AT5G14670,AT5G40890,AT1G80830,AT5G45470,AT4G31590,AT4G08380,AT2G26220,AT5G27210,AT1G76460,AT4G23830,AT1G68670,AT3G54370,AT1G70430,AT5G23530,AT1G15800,AT4G02470,AT5G33360,AT1G06070,AT4G11300,AT1G78110,AT2G45180,AT5G60740,AT1G63690,AT4G24230,AT1G17860,AT1G43700,AT5G11210,AT1G78910,AT3G60030,AT1G19870,AT1G44940,AT2G05510,AT1G12090,AT1G42300,AT2G21060,AT1G30820,AT1G07655,AT2G25980,AT2G22900,AT5G13990,AT1G29400,AT5G39610,AT3G22570,AT1G61460,AT5G07110,AT4G39090,AT3G50500,AT3G01770,AT1G03180,AT2G26660,AT1G26850,AT5G21060,AT2G22170,AT3G43760,AT5G38010,AT5G63660,AT5G16590,AT3G60550,AT1G67590,AT5G03180,AT1G53035,AT1G76880,AT3G02800,AT1G72870,AT1G70990,AT1G70950,AT2G26650,AT4G37790,AT3G56170,AT3G22960,AT1G61170,AT5G47780,AT5G11920,AT1G48260,AT3G23560,AT1G69500,AT5G04810,AT5G52990,AT5G64590,AT1G54420,AT3G52480,AT4G01430,AT1G10200,AT4G34030,AT3G49860,AT5G20650,AT3G22240,AT3G48390,AT2G25050,AT3G13460,AT5G39190,AT3G13445,AT1G79060,AT5G51150,AT3G56480,AT3G13980,AT5G06980,AT5G05190,AT1G54680,AT4G12470,AT1G09415,AT5G23210,AT1G13960,AT5G23800,AT3G22120,AT1G30770,AT5G54200,AT2G36410,AT3G04730,AT4G22212,AT5G44250,AT5G19510,AT2G46550,AT3G07340,AT1G71020,AT1G12520,AT1G75580,AT2G31280,AT2G47930,AT1G04040,AT1G35250,AT3G26300,AT1G37000,AT5G58900,AT1G55290,AT1G02840,AT3G57550,AT1G09750,AT1G15110,AT5G22920,AT2G05580,AT5G55410,AT5G43290,AT1G70220,AT1G33050,AT1G61900,AT3G03270,AT3G07990,AT4G38770,AT4G16515,AT3G15115,AT1G19540,AT1G15500,AT5G53300,AT5G34835,AT5G65700,AT3G42060,AT3G08670,AT4G30370,AT3G47130,AT1G32140,AT5G03530,AT4G35060,AT1G47860,AT5G25160,AT2G45620,AT4G05350,AT4G25780,AT3G11340,AT3G18200,AT3G49930,AT2G45170,AT2G29980,AT1G04380,AT5G12440,AT1G60010,AT2G31945,AT1G04680,AT2G27360,AT3G10985,AT3G16460,AT1G26290,AT1G23870,AT3G10450,AT1G74790,AT4G19140,AT2G16350,AT4G37610,AT1G23830,AT1G13640,AT1G20680,AT5G05690,AT5G48160,AT5G66330,AT5G43550,AT2G40940,AT4G22610,AT3G55610,AT1G28000,AT5G01350,AT1G03090,AT2G23050,AT1G72150,AT5G64570,AT3G10020,AT5G11370,AT5G46050,AT1G30080,AT1G17430,AT1G01280,AT4G12690,AT1G10120,AT3G12950,AT5G14840,AT3G28860,AT5G16370,AT4G31370,AT1G78160,AT3G08030,AT3G27770,AT1G08830,AT1G21270,AT5G55010,AT4G17080,AT2G47160,AT3G06990,AT5G41080,AT4G13030,AT1G36480,AT1G30700,AT5G12250,AT3G01520,AT1G33170,AT1G30230,AT4G38470,AT1G79130,AT5G05890,AT4G16670,AT5G44340,AT2G35750,AT1G78970,AT1G29370,AT3G12310,AT1G49600,AT1G31290,AT3G49160,AT1G66780,AT1G64390,AT3G42520,AT5G24730,AT5G48000,AT1G58032,AT1G21400,AT4G32860,AT2G17500,AT5G17550,AT3G13710,AT1G22330,AT4G00150,AT1G21060,AT1G28327,AT1G26980,AT5G64410,AT3G53250,AT1G52750,AT1G08990,AT4G22490,AT3G50970,AT3G23530,AT1G67030,AT3G02390,AT2G11940,AT1G35950,AT4G38440,AT2G18300,AT3G49300,AT4G23870,AT2G43830,AT3G44240,AT3G60520,AT5G63190,AT1G74500,AT4G28470,AT4G09830,AT4G07780,AT5G05420,AT5G39970,AT4G34530,AT3G57170,AT5G06200,AT5G49100,AT1G04250,AT5G49720,AT3G17420,AT3G47420,AT4G14010,AT4G38860,AT1G07170,AT2G35820,AT2G44380,AT5G50700,AT4G12880,AT1G15350,AT1G74660,AT3G16240,AT1G08500,AT5G02270,AT1G03890,AT2G25930,AT5G36230,AT2G26320,AT1G78720,AT4G28040,AT1G08890,AT4G28240,AT2G15890,AT1G68840,AT1G51940,AT5G57670,AT2G02680,AT4G36670,AT3G15510,AT5G47980,AT5G61590,AT1G02530,AT1G79770,AT1G23060,AT3G21870,AT2G06200,AT1G62360,AT1G10210,AT4G33150,AT2G33270,AT5G56870,AT5G66590,AT5G61730,AT5G07440,AT5G37170,AT5G08030,AT1G12780,AT3G61700,AT5G56100,AT1G29780,AT2G46310,AT4G33070,AT1G55810,AT5G16110,AT5G19260,AT3G10040,AT4G33740,AT2G01340,AT1G49660,AT5G53650,AT4G30270,AT3G07130,AT3G29180,AT3G20710,AT2G25260,AT5G48410,AT5G56040,AT1G60610,AT4G23400,AT2G42040,AT4G20260,AT4G19160,AT1G09390,AT5G59010,AT5G49700,AT3G09940,AT5G11420,AT1G04310,AT4G18210,AT1G12500,AT5G47450,AT1G13260,AT1G62045,AT1G62440,AT4G37330,AT1G01980,AT5G43770,AT1G53830,AT3G26520,AT3G55770,AT5G25810,AT5G09440,AT4G15610,AT5G07010,AT3G23800,AT4G22810,AT3G18780,AT1G20520,AT1G30330,AT1G05550,AT5G26260,AT4G35100,AT2G02080,AT4G16690,AT4G13540,AT4G33750,AT1G32700,AT3G11760,AT2G39210,AT3G48360,AT4G12730,AT1G64640,AT3G02110,AT1G02610,AT1G76410,AT3G49790,AT1G06980,AT5G59550,AT1G64670,AT5G52830,AT3G28910,AT5G26780,AT4G04955,AT2G39820,AT5G22740,AT5G40590,AT4G14640,AT1G13430,AT1G62310,AT1G22550,AT5G05960,AT1G06360,AT2G40300,AT5G27070,AT1G75180,AT2G26390,AT4G31240,AT4G02090,AT4G27260,AT1G72290,AT5G04120,AT5G03960,AT5G49800,AT1G21820,AT2G21540,AT4G34770,AT3G52060,AT1G26790,AT5G60760,AT5G64330,AT1G67980,AT3G27050,AT3G21330,AT5G37790,AT1G75240,AT1G17700,AT5G44120,AT3G21560,AT1G78440,AT2G18280,AT5G23230,AT2G38070,AT5G65310,AT1G72600,AT1G76090,AT3G24720,AT4G10850,AT3G60120,AT3G30180,AT4G11050,AT5G06930,AT1G20900,AT3G24580,AT1G11000,AT5G10770,AT2G46130,AT5G54470,AT5G43060,AT1G60140,AT1G61590,AT5G12990,AT4G11210,AT3G11580,AT1G01400,AT1G04710,AT5G27890,AT2G04690,AT1G22530,AT5G17010,AT5G19520,AT4G26290,AT3G17790,AT5G18490,AT5G14920,AT5G39080,AT4G37070,AT5G18080,AT1G05830,AT4G35750,AT3G29340,AT1G02200,AT4G18965,AT2G18210,AT4G25260,AT4G23820,AT5G56540,AT1G17190,AT2G01480,AT4G28520,AT3G63470,AT1G77120,AT5G48430,AT5G14740,AT4G13580,AT3G49210,AT1G21360,AT3G60650,AT3G10690,AT5G51520,AT2G25900,AT1G25230,AT3G45780,AT5G45180,AT2G42840,AT1G21910,AT5G21940,AT5G22310,AT3G25290,AT1G18330,AT4G36850,AT1G56220,AT2G30930,AT1G67480,AT5G42860,AT1G15670,AT1G08630,AT5G07030,AT1G70830,AT4G17730,AT3G59690,AT3G02170,AT2G33830,AT3G54770,AT5G57655,AT3G43670,AT5G05450,AT4G30190,AT3G16640,AT1G11260,AT2G31900,AT2G36320,AT1G09920,AT1G54910,AT1G46768,AT4G36880,AT1G05810,AT4G31250,AT4G10020,AT5G07490,AT3G10120,AT2G01360,AT3G53480,AT3G01220,AT4G16100,AT5G42410,AT1G09460,AT1G08590,AT5G02540,AT5G21020,AT1G10480,AT5G49360,AT2G44130,AT5G04470,AT3G58120,AT4G30290,AT1G75780,AT5G51670,AT4G01680,AT4G08950,AT1G33280,AT1G64660,AT2G35280,AT3G32980,AT3G02550,AT1G33840,AT4G33560,AT1G49130,AT1G01780,AT3G23880,AT3G11550,AT1G31825,AT4G35190,AT5G22690,AT1G52660,AT5G44110,AT1G36700,AT4G02290,AT5G57660,AT2G16060,AT1G61120,AT5G49665,AT3G24020,AT1G18290,AT1G20620,AT5G49450,AT1G10140,AT2G14870,AT5G67060,AT5G01330,AT2G45050,AT2G21910,AT5G04370,AT1G69490,AT4G22460,AT1G45130,AT3G02620,AT1G67810,AT1G17810,AT5G52250,AT1G62480,AT2G21140,AT4G13660,AT2G22680,AT3G15450,AT4G21840,AT5G03150,AT3G52520,AT2G20670,AT3G49040,AT5G52710,AT5G19120,AT5G54740,AT4G29690,AT5G30545,AT1G44160,AT5G20620,AT1G32170,AT5G59090,AT4G28720,AT5G04770,AT4G30410,AT5G17330,AT1G05770,AT5G19740,AT5G01210,AT1G75540,AT3G26510,AT4G23690,AT5G57620,AT3G23930,AT1G33055,AT4G27310,AT2G44740,AT5G02580,AT1G01390,AT5G25460,AT3G16180,AT1G10550,AT1G52190,AT5G47990,AT3G20390,AT4G29270,AT1G27230,AT5G67430,AT1G14890,AT1G20190,AT2G14900,AT2G14020,AT4G37890,AT4G36930,AT5G03860,AT4G37870,AT5G20150,AT2G42870,AT3G60070,AT5G23730,AT5G03545,AT5G65390,AT3G02040,AT3G05920,AT1G36060,AT3G47340,AT3G60140,AT2G05540,AT2G47000,AT2G18050,AT2G21655,AT4G30170,AT5G15120,AT4G11190,AT4G30280,AT4G14690,AT1G80440,AT5G60660,AT1G65670,AT2G44790,AT2G28670,AT1G03790,AT1G02640,AT3G55230,AT5G38200,AT4G35720,AT5G59880,AT4G31380,AT1G77330,AT3G59900,AT5G38810,AT1G73120,AT2G25370,AT4G04220,AT1G72070,AT4G26320,AT2G38530,AT4G39070,AT2G43050,AT2G31980,AT1G28330,AT5G57240,AT5G53660,AT3G43660,AT4G32460,AT1G60060,AT1G67910,AT5G22500,AT5G62280,AT5G15230,AT1G13590,AT4G11290,AT1G02340,AT1G77690,AT4G25580,AT3G05150,AT5G46900,AT2G32300,AT1G19530,AT3G50330,AT2G37130,AT5G10430,AT4G27450,AT4G11620,AT5G53250,AT1G10070,AT1G62770,AT4G14130,AT3G21720,AT4G12520,AT5G44440,AT5G54190 MA_HYPOCOTYL_WL/D_UP Up-regulated in Hypocotyl WL Vs. D (TableS8 PubmedID:15888681) AT4G13770,AT4G09480,AT5G54770,AT5G23010,AT1G52400,AT3G44970,AT2G43100,AT5G14200,AT3G02020,AT4G27570,AT1G31580,AT1G17420,AT1G78370,AT1G65860,AT5G24770,AT1G56510,AT2G34420,AT1G16410,AT1G19670,AT5G10170,AT4G12030,AT1G74430,AT3G44860,AT2G39030,AT5G12340,AT5G62360,AT3G12145,AT3G58990,AT5G42530,AT5G15970,AT3G25760,AT4G22520,AT4G27560,AT1G65400,AT1G32480,AT2G24850,AT4G27520,AT5G63450,AT2G31790,AT3G51450,AT1G62560,AT2G39730,AT5G64750,AT1G21440,AT1G17380,AT5G44580,AT1G08380,AT1G53890,AT1G22150,AT4G29030,AT1G54020,AT5G24160,AT1G76080,AT5G52050,AT1G72115,AT5G04140,AT2G43530,AT2G46650,AT1G70700,AT2G34430,AT1G55020,AT1G79040,AT3G25780,AT3G54890,AT1G25250,AT1G43160,AT4G04610,AT5G52020,AT5G23020,AT5G05270,AT5G42800,AT1G68010,AT5G05600,AT1G72520,AT3G63140,AT5G12990,AT4G17250,AT5G16010,AT1G16400,AT4G28750,AT1G56600,AT4G37930,AT5G54710,AT3G50820,AT5G24420,AT5G06870,AT5G54270,AT1G14830,AT1G55670,AT5G13220,AT3G45160,AT2G16660,AT3G47960,AT2G21330,AT5G01730,AT1G59124,AT1G10370,AT5G01870,AT1G32900,AT1G61520,AT5G46450,AT1G65890,AT4G10340,AT5G13930,AT1G78490,AT5G58390,AT4G12800,AT4G25050,AT4G38970,AT5G28450,AT1G23310,AT5G20230,AT3G50970,AT1G20340,AT4G05180,AT1G18590,AT3G03780,AT5G54170,AT4G39940,AT3G44870,AT5G65280,AT1G74500,AT1G06680,AT1G67740,AT3G12580,AT5G38020,AT1G66970,AT3G14420,AT2G30570,AT3G19710,AT4G29670,AT1G35647,AT5G46110,AT1G60270,AT5G36920,AT2G22330,AT5G36790,AT5G42650,AT5G35630,AT3G25830,AT4G18010,AT1G66760,AT2G14020,AT5G61420,AT5G65010,AT1G13710,AT1G54560,AT5G52310,AT5G66570,AT4G03280,AT4G30530,AT3G21230,AT1G44575,AT3G09940,AT4G09900,AT4G24380,AT1G42970,AT5G24380,AT2G43550,AT1G52030,AT3G23250,AT1G31330,AT2G38540,AT4G39950,AT4G04640,AT1G17750,AT1G18710,AT1G35290,AT4G22610,AT1G29660,AT1G08920,AT4G14040,AT1G77760,AT4G09650,AT1G52230,AT1G18060,AT4G28780,AT4G14660,AT1G55790,AT1G52000,AT1G19570,AT1G42300,AT3G21470,AT3G56290,AT4G34710,AT3G28220,AT1G77450,AT4G38740,AT5G26000,AT1G78720,AT4G21840,AT2G28790,AT1G28290,AT4G03050,AT1G09920,AT5G59480,AT1G74890,AT2G26320,AT5G25980,AT3G01830,AT1G33840,AT1G41700,AT4G33010,AT1G47760,AT5G13630,AT5G48300,AT4G08030,AT1G37130,AT4G26290,AT4G36830,AT1G09340,AT5G15080,AT2G25980,AT1G70130,AT1G61190,AT3G30640,AT3G26570,AT1G20310,AT4G22890,AT5G55120,AT5G08030,AT1G80820,AT1G70220,AT4G08170,AT1G15290,AT3G26650,AT3G56940,AT1G06460,AT2G29600,AT1G54000,AT5G35475,AT4G31780,AT5G64040,AT3G53260,AT2G23670,AT3G21800,AT2G14750,AT2G39980,AT2G33270,AT5G53750,AT3G57020,AT4G14260,AT1G31090,AT5G62350,AT5G66190,AT2G35290,AT4G22590,AT4G27070,AT1G35310,AT2G27550,AT1G76680,AT1G18020,AT1G67020,AT2G30860,AT5G01530,AT5G09660,AT5G59320,AT5G10130,AT1G72450,AT1G07600,AT4G02770,AT3G21750,AT5G34835,AT1G33590,AT5G53450,AT3G04290,AT1G78280,AT4G01250,AT4G16950,AT1G62975,AT3G26060,AT4G28660,AT5G54390,AT5G53050,AT3G55605,AT2G21130,AT1G13930,AT4G23560,AT1G01980,AT3G55120,AT5G30480,AT3G47540,AT5G44780,AT5G43220,AT2G42220,AT3G45140,AT2G24820,AT3G55800,AT4G21440,AT4G08380,AT4G13490,AT3G49630,AT5G07460,AT2G43510,AT3G15530,AT1G60260,AT1G65870,AT3G04210,AT3G44170,AT3G49680,AT1G08290,AT5G63980,AT5G08640,AT1G73480,AT5G36090,AT5G23060,AT5G50101,AT3G13470,AT5G58670,AT3G61220,AT5G67370,AT2G33850,AT4G38410,AT4G21870,AT2G38230,AT3G09440,AT5G50740,AT3G01500,AT4G02530,AT1G56580,AT1G68120,AT1G31230,AT2G18370,AT1G12240,AT2G26740,AT1G58420,AT2G26900,AT2G28000,AT4G22240,AT1G63880,AT2G10890,AT3G54640,AT3G26840,AT1G78000,AT3G43660,AT5G50670,AT5G32430,AT3G17110,AT5G55020,AT5G48880,AT4G20860,AT3G44630,AT1G51115,AT1G78210,AT5G58120,AT3G26830,AT3G52740,AT3G19550,AT5G47910,AT5G17460,AT5G37990,AT1G07610,AT5G28520,AT1G75460,AT3G09390,AT2G04400,AT1G53840,AT2G43620,AT5G35020,AT1G36700,AT4G13800,AT2G30950,AT5G55010,AT1G61340,AT3G28930,AT3G16860,AT3G42650,AT1G56250,AT2G21960,AT1G34000,AT1G12370,AT5G43420,AT3G63410,AT1G80300,AT5G01040,AT2G20260,AT5G49630,AT3G32090,AT1G51620,AT4G01990,AT4G30650,AT4G35630,AT5G67080,AT2G34810,AT3G15840,AT1G79480,AT4G21280,AT1G54780,AT4G37410,AT3G61870,AT5G22440,AT2G35260,AT1G10960,AT1G21270,AT5G48360,AT3G23400,AT1G74730,AT1G23740,AT3G50910,AT3G13110,AT1G54090,AT3G51820,AT3G58550,AT4G01360,AT3G29320,AT5G48930,AT1G11925,AT5G59250,AT1G58270,AT2G22210,AT3G08940,AT2G46820,AT5G22630,AT4G13430,AT4G28250,AT1G32060,AT5G17990,AT5G06530,AT1G14120,AT5G35170,AT4G12310,AT4G15000,AT2G30770,AT2G35930,AT2G39800,AT5G08050,AT4G35480,AT1G02560,AT1G21310,AT1G78020,AT1G35250,AT1G44350,AT3G49570,AT4G17090,AT1G76790,AT5G13700,AT3G28520,AT2G46420,AT3G54880,AT3G23830,AT2G29340,AT5G35890,AT1G24330,AT5G64850,AT3G57640,AT5G32560,AT2G41880,AT5G28510,AT1G23850,AT5G37550,AT1G07170,AT1G30700,AT3G25250,AT1G52720,AT4G19020,AT3G15990,AT3G02840,AT2G30040,AT2G38390,AT1G15980,AT5G50730,AT5G12860,AT1G32140,AT3G23295,AT3G50930,AT5G09480,AT3G53140,AT4G37760,AT4G29690,AT1G20815,AT4G22710,AT1G77670,AT3G02830,AT1G51820,AT5G14670,AT4G16870,AT4G31985,AT2G23050,AT1G17100,AT4G31795,AT2G23320,AT5G43210,AT2G31470,AT1G05800,AT3G02730,AT3G43560,AT1G56300,AT3G54050,AT5G40390,AT1G58602,AT2G37270,AT4G18740,AT3G16080,AT4G01050,AT3G17040,AT1G24020,AT3G26330,AT5G23820,AT3G28500,AT5G55050,AT1G58340,AT5G13200,AT2G41100,AT4G24830,AT5G35735,AT4G22990,AT1G69230,AT1G73325,AT4G00670,AT5G09220,AT1G74360,AT5G02940,AT3G48520,AT5G64080,AT1G11460,AT5G43690,AT5G37170,AT1G16720,AT5G23960,AT5G13490,AT4G19810,AT1G76930,AT3G56340,AT1G59720,AT1G55780,AT2G23120,AT1G78630,AT5G40950,AT1G51090,AT5G11070,AT2G47110,AT3G18290,AT1G28390,AT5G17870,AT5G29075,AT3G55750,AT5G16540,AT5G38980,AT5G47670,AT2G02750,AT1G48630,AT2G37180,AT3G19830,AT3G23580,AT4G31820,AT2G42760,AT3G48930,AT5G36860,AT5G09980,AT1G69530,AT2G22760,AT5G47500,AT4G18810,AT5G38710,AT5G62630,AT3G18130,AT5G54510,AT5G52650,AT2G47590,AT4G17000,AT2G19730,AT1G59860,AT4G19980,AT1G03630,AT5G15160,AT5G29060,AT1G68590,AT4G27300,AT2G04390,AT5G36140,AT5G39790,AT4G24960,AT4G34190,AT2G36160,AT1G80110,AT3G44750,AT4G01700,AT2G14860,AT2G46150,AT2G40840,AT3G46970,AT1G21500,AT2G25210,AT5G02160,AT5G45775,AT1G47980,AT1G62310,AT3G59060,AT1G30120,AT2G37770,AT5G13650,AT3G04840,AT1G70820,AT5G40110,AT1G52510,AT4G29400,AT4G36670,AT2G10650,AT5G38810,AT2G37040,AT3G43600,AT3G52960,AT4G04830,AT3G57450,AT1G13610,AT5G44950,AT2G39250,AT1G09795,AT1G50900,AT5G60890,AT4G10500,AT3G18890,AT5G09590,AT3G26290,AT2G27080,AT5G11590,AT5G51440,AT5G61780,AT5G22460,AT1G01470,AT3G62250,AT1G66160,AT4G28080,AT5G47930,AT2G38140,AT2G01180,AT5G62700,AT5G19220,AT5G11360,AT5G44870,AT5G42980,AT2G34120,AT5G52320,AT4G22212,AT1G30530,AT2G27710,AT4G14950,AT3G26080,AT5G15450,AT1G04420,AT5G02790,AT1G24520,AT1G18540,AT1G06830,AT1G65670,AT5G13510,AT1G70600,AT1G28480,AT2G01250,AT5G49080,AT1G19410,AT2G26840,AT5G23310,AT4G39840,AT2G33580,AT1G71200,AT2G19740,AT1G20030,AT2G22500,AT1G28327,AT3G61640,AT5G49910,AT3G59760,AT5G17670,AT1G11140,AT2G38750,AT1G28570,AT1G24140,AT4G10300,AT1G80450,AT3G43760,AT3G10595,AT2G37880,AT2G05310,AT1G43330,AT1G23020,AT2G47050,AT1G32080,AT1G19180,AT3G54810,AT4G05350,AT4G38420,AT4G29700,AT4G24770,AT1G03310,AT1G11670,AT5G40370,AT4G20710,AT1G34050,AT5G55890,AT5G27380,AT2G21580,AT1G08660,AT3G23670,AT2G26150,AT2G21280,AT1G01120,AT5G35540,AT3G46900,AT2G43570,AT4G28280,AT3G16050,AT1G03210,AT5G02240,AT4G01850,AT1G51790,AT2G22250,AT4G31970,AT2G16900,AT3G54020,AT1G51680,AT5G15650,AT3G09200,AT5G06110,AT1G14040,AT4G34410,AT5G51750,AT3G52180,AT3G08740,AT1G77430,AT3G46490,AT3G44590,AT5G26340,AT1G63650,AT1G59950,AT4G21210,AT5G45060,AT2G44580,AT5G51040,AT3G07770,AT1G09780,AT4G11990,AT2G48090,AT5G40060,AT2G27660,AT5G15090,AT4G30660,AT2G17220,AT1G65230,AT4G16370,AT2G05620,AT1G77490,AT3G53890,AT5G09650,AT5G05590,AT1G43560,AT3G56060,AT5G15530,AT5G64940,AT3G22850,AT1G03360,AT3G05060,AT4G29780,AT4G24140,AT4G24130,AT1G35680,AT2G35750,AT4G02940,AT4G36220,AT2G16280,AT3G20390,AT4G34950,AT3G15790,AT3G24830,AT1G67360,AT1G75860,AT5G14370,AT3G23390,AT5G59850,AT3G16780,AT2G37030,AT1G68840,AT4G13950,AT4G02230,AT3G14600,AT1G44930,AT5G22800,AT1G55210,AT1G59960,AT2G46340,AT4G21990,AT4G14690,AT2G45870,AT1G04270,AT2G18550,AT1G68510,AT1G48920,AT3G14800,AT1G37200,AT5G59520,AT1G42310,AT1G62360,AT3G50760,AT4G14630,AT1G51840,AT3G10450,AT5G14150,AT5G34862,AT3G22790,AT2G16740,AT1G52130,AT1G61890,AT1G62460,AT3G63380,AT5G17521,AT1G18210,AT2G22880,AT2G39460,AT3G62530,AT5G58960,AT1G80530,AT1G11580,AT3G49300,AT5G09530,AT3G49430,AT5G38510,AT1G32990,AT1G06650,AT3G55980,AT3G23990,AT5G46730,AT3G21240,AT4G11280,AT4G07780,AT5G48480,AT4G05100,AT2G41710,AT1G02465,AT1G26880,AT4G23180,AT4G28940,AT2G23170,AT1G18140,AT1G66090,AT5G59550,AT2G22420,AT5G04590,AT2G20570,AT4G33680,AT5G58778,AT1G18870,AT5G16130,AT5G61130,AT4G29410,AT1G41870,AT1G66580,AT5G02610,AT5G02450,AT1G67700,AT5G38940,AT5G47980,AT3G52590,AT4G39200,AT5G20240,AT5G46430,AT4G00810,AT3G18080,AT5G11740,AT1G53240,AT4G22020,AT1G62180,AT4G17615,AT2G32990,AT1G77990,AT5G45110,AT1G23470,AT5G62300,AT5G48760,AT4G13170,AT5G05250,AT1G63720,AT1G79550,AT1G56340,AT2G40330,AT4G29430,AT5G10380,AT4G27720,AT2G35070,AT1G61930,AT5G20290,AT2G16430,AT2G14090,AT5G06320,AT5G55840,AT1G15140,AT1G75350,AT2G40520,AT3G19970,AT5G27520,AT4G15320,AT2G37600,AT2G44120,AT1G66080,AT5G64530,AT3G20370,AT5G62220,AT1G61820,AT3G19330,AT3G48500,AT4G30330,AT3G21560,AT3G04400,AT3G06500,AT3G32400,AT1G51850,AT4G03060,AT5G08040,AT4G13470,AT2G39510,AT4G25130,AT4G18100,AT1G01610,AT1G44940,AT5G43030,AT1G11960,AT5G27190,AT5G52870,AT2G04370,AT2G32480,AT1G56500,AT2G23910,AT1G64680,AT1G03680,AT1G01790,AT2G37190,AT4G36710,AT2G17660,AT1G14780,AT1G55480,AT5G30584,AT2G01290,AT5G07020,AT5G37700,AT5G12890,AT5G65990,AT4G22490,AT2G47950,AT1G21970,AT1G76160,AT5G56330,AT2G34860,AT1G76450,AT5G14910,AT1G78070,AT1G26970,AT5G05420,AT4G07640,AT1G69700,AT1G50660,AT2G26650,AT1G31650,AT5G13750,AT5G01210,AT3G14200,AT4G23220,AT4G09590,AT1G26420,AT3G56910,AT1G79850,AT2G41840,AT2G02740,AT1G49750,AT4G12480,AT5G45340,AT5G17760,AT2G21340,AT2G23630,AT5G23740,AT3G20260,AT5G34800,AT3G57050,AT4G34290,AT5G28670,AT3G49910,AT4G13930,AT5G63560,AT4G29070,AT1G80270,AT2G26530,AT5G47700,AT5G23510,AT1G70410,AT2G01110,AT3G18830,AT4G34590,AT2G20450,AT5G40540,AT1G01580,AT2G32060,AT3G09630,AT4G24920,AT3G27850,AT2G30490,AT2G43030,AT3G09500,AT1G47910,AT3G22550,AT5G35120,AT4G09820,AT4G37910,AT1G61230,AT1G51950,AT2G41680,AT3G58790,AT3G07110,AT3G22310,AT3G55040,AT2G23930,AT3G50950,AT1G42650,AT1G78160,AT1G11840,AT5G58810,AT5G51820,AT1G76620,AT3G06700,AT4G25210,AT1G79770,AT2G06520,AT3G45960,AT5G24780,AT5G07490,AT3G47980,AT1G79130,AT1G03840,AT2G32190,AT3G21890,AT1G76420,AT5G44720,AT2G35450,AT3G15350,AT5G49480,AT4G26230,AT2G32960,AT2G47090,AT1G56660,AT5G04000,AT1G63360,AT3G24270,AT3G55510,AT1G72280,AT5G22530,AT5G61810,AT5G13190,AT3G02000,AT1G68945,AT3G55840,AT3G59250,AT5G34990,AT2G45220,AT3G27540,AT5G56670,AT1G29670,AT2G32130,AT1G78970,AT1G65060,AT1G21880,AT1G65560,AT2G43020,AT1G15440,AT3G03630,AT2G05990,AT4G31550,AT1G30360,AT3G19170,AT1G77590,AT1G63940,AT3G25500,AT3G60420,AT1G32550,AT2G47060,AT2G21170,AT4G05110,AT3G18330,AT1G30580,AT4G17600,AT1G24967,AT1G14410,AT3G54390,AT1G30820,AT2G14290,AT3G18620,AT3G60120,AT4G01900,AT1G49410,AT5G33320,AT3G15810,AT5G23070,AT4G25730,AT2G22470,AT4G26780,AT3G58660,AT1G48390,AT2G32220,AT1G65260,AT4G37800,AT4G24930,AT1G09760,AT1G74980,AT5G62390,AT1G09850,AT5G08760,AT3G42990,AT1G26930,AT2G33530,AT4G28590,AT3G22830,AT1G77060,AT2G40080,AT1G32220,AT5G53880,AT4G04700,AT5G57040,AT5G23530,AT1G06430,AT3G62230,AT4G38810,AT1G23220,AT1G29700,AT5G17000,AT1G33350,AT5G14060,AT2G32530,AT1G31710,AT5G41970,AT3G01280,AT2G25460,AT3G04710,AT5G41070,AT4G30490,AT1G79140,AT1G69840,AT5G17350,AT1G59725,AT2G35090,AT4G27870,AT1G68830,AT2G36170,AT4G34870,AT5G35490,AT1G05010,AT2G36580,AT5G47220,AT1G27350,AT1G69480,AT1G80340,AT4G02280,AT3G13610,AT1G76130,AT5G17830,AT5G17630,AT5G07090,AT4G36240,AT5G55280,AT3G16410,AT4G07530,AT4G24780,AT3G25570,AT2G41380,AT5G52970,AT2G33200,AT2G27840,AT5G02050,AT1G04350,AT2G43560,AT1G53300,AT5G60670,AT4G25290,AT1G34420,AT1G62290,AT1G72940,AT4G21940,AT4G35950,AT5G17780,AT4G25340,AT5G23850,AT2G23600,AT2G22860,AT5G05450,AT2G41800,AT3G06730,AT1G73060,AT4G00050,AT1G13650,AT3G28900,AT3G10930,AT4G12600,AT4G14320,AT5G55560,AT1G28380,AT5G58900,AT1G18250,AT4G19690,AT1G07135,AT5G60960,AT5G66460,AT2G38360,AT5G58070,AT5G49780,AT3G19800,AT1G64880,AT1G74310,AT4G00370,AT5G48470,AT4G15490,AT2G43590,AT1G14060,AT1G17290,AT1G64590,AT4G10420,AT5G46510,AT1G01100,AT1G01280,AT1G30330,AT4G39540,AT4G27850,AT5G63660,AT5G51100,AT2G36250,AT3G08990,AT5G19370,AT1G49620,AT5G58260,AT1G22500,AT4G21860,AT5G52410,AT3G55330,AT3G57610,AT2G40460,AT5G14580,AT1G57820,AT3G52750,AT4G34300,AT1G63970,AT1G59790,AT1G78560,AT2G01150,AT2G16350,AT2G35240,AT3G27925,AT1G70610,AT1G63560,AT2G19310,AT1G18300,AT5G03860,AT3G15110,AT2G37240,AT2G10060,AT1G59870,AT5G65810,AT1G61120,AT5G42010,AT1G03180,AT2G01360,AT1G48030,AT2G15290,AT3G18740,AT4G31840,AT3G06030,AT1G07070,AT1G74440,AT3G06880,AT3G10120,AT1G35560,AT1G67810,AT4G37470,AT4G30220,AT1G79310,AT1G56190,AT5G07350,AT1G48750,AT3G07750,AT4G33510,AT5G43580,AT1G33280,AT5G20070,AT3G42140,AT2G42840,AT2G18400,AT1G78440,AT1G21350,AT2G01340,AT1G31250,AT1G69900,AT5G46090,AT1G75580,AT5G22830,AT3G22960,AT1G07120,AT2G20880,AT1G77090,AT4G17740,AT1G48350,AT1G15500,AT5G26800,AT5G20630,AT5G56940,AT5G45180,AT5G24290,AT5G06590,AT4G23190,AT1G42480,AT5G65700,AT2G22930,AT1G12900,AT4G33260,AT4G03520,AT5G64670,AT3G28510,AT1G18860,AT4G13010,AT2G42560,AT5G02270,AT1G31880,AT5G48000,AT4G19390,AT1G05210,AT1G34560,AT3G23530,AT3G50300,AT1G31290,AT4G26510,AT4G33050,AT5G39190,AT1G66200,AT5G54180,AT5G37800,AT2G29500,AT4G23620,AT1G27060,AT5G07030,AT1G16960,AT3G18560,AT3G25530,AT5G65470,AT1G29040,AT5G22620,AT4G37390,AT5G61790,AT1G29780,AT4G24510,AT2G02810,AT4G37200,AT3G53190,AT1G73330,AT2G42710,AT3G25190,AT2G35280,AT1G32500,AT2G17170,AT5G19510,AT1G32240,AT3G02350,AT4G14420,AT1G31825,AT3G61820,AT2G46860,AT3G62760,AT4G11050,AT5G50890,AT3G50170,AT5G52280,AT3G44480,AT5G59700,AT1G17700,AT4G21780,AT1G70480,AT5G15520,AT3G02110,AT1G33430,AT4G10620,AT4G36530,AT2G29530,AT1G20680,AT4G01660,AT2G43480,AT1G64170,AT4G11570,AT1G16000,AT4G16150,AT1G23750,AT5G39550,AT4G04790,AT1G72640,AT2G35790,AT2G43830,AT3G61100,AT1G29470,AT1G42375,AT5G52810,AT1G31700,AT1G62540,AT5G22690,AT4G27240,AT5G37020,AT4G26530,AT5G27070,AT5G48850,AT1G23180,AT1G27730,AT3G12370,AT2G35120,AT1G73800,AT3G46230,AT5G55410,AT4G13550,AT5G56760,AT5G33360,AT3G58140,AT2G47890,AT5G13800,AT3G23130,AT4G24110,AT5G13320,AT3G28270,AT5G45070,AT3G18940,AT5G28590,AT5G41090,AT3G08030,AT5G43150,AT5G64590,AT5G47840,AT4G15920,AT4G29680,AT3G54040,AT2G38290,AT4G10000,AT3G03580,AT4G09160,AT2G29980,AT3G53480,AT5G61010,AT1G17230,AT4G37530,AT5G44840,AT3G16400,AT1G04430,AT1G49290,AT5G63700,AT1G63750,AT1G16080,AT1G75040,AT4G33020,AT1G63610,AT1G09160,AT2G05440,AT5G08380,AT5G22890,AT1G49600,AT5G27210,AT1G31920,AT1G55290,AT5G11880,AT1G18970,AT1G78140,AT5G44630,AT5G05410,AT3G57520,AT5G20900,AT3G22240,AT1G13520,AT2G27290,AT5G45850,AT4G33550,AT2G20270,AT3G53160,AT3G14520,AT5G53650,AT5G40170,AT4G26210,AT1G70430,AT5G17330,AT5G59120,AT1G10030,AT5G57440,AT5G16880,AT4G20220,AT5G59070,AT5G04720,AT4G08950,AT5G52140,AT2G02500,AT1G79470,AT1G08050,AT4G16260,AT3G54250,AT5G13990,AT5G52580,AT4G16690,AT2G31040,AT1G79050,AT1G17860,AT4G30810,AT5G13120,AT1G61580,AT4G30960,AT5G02950,AT2G06200,AT5G11210,AT3G23840,AT4G14360,AT2G18410,AT3G49090,AT3G07600,AT2G46240,AT5G51160,AT2G33620,AT1G19950,AT2G13930,AT4G11780,AT5G65870,AT3G22800,AT1G68430,AT5G24270,AT3G50675,AT1G77210,AT5G57110,AT4G11650,AT1G16260,AT3G05730,AT1G04380,AT2G20870,AT4G14140,AT2G39820,AT1G60770,AT2G30360,AT1G32440,AT1G03990,AT2G15440,AT5G41240,AT3G10710,AT5G03060,AT1G08560,AT2G34770,AT1G51000,AT5G61110,AT1G01140,AT1G36480,AT4G17300,AT5G41080,AT4G02500,AT1G78915,AT1G26790,AT4G17240,AT5G12110,AT5G20740,AT4G38460,AT4G09110,AT1G30750,AT2G35840,AT3G53240,AT3G48320,AT2G35210,AT5G63160,AT1G09415,AT4G25890,AT1G60110,AT1G80830,AT3G49180,AT3G57550,AT1G63000,AT1G28000,AT1G64650,AT4G37870,AT1G21060,AT4G34260,AT3G03890,AT4G13420,AT1G14250,AT1G08400,AT3G14060,AT5G22190,AT1G65700,AT1G54040,AT3G24500,AT5G65980,AT1G61460,AT3G51740,AT3G17820,AT1G54680,AT4G02520,AT2G05950,AT5G65310,AT1G01400,AT3G06050,AT2G46100,AT1G71290,AT1G26850,AT4G17050,AT5G08020,AT5G40480,AT1G17190,AT5G48430,AT1G68880,AT5G48910,AT3G61700,AT1G75240,AT2G25370,AT4G36700,AT5G22740,AT5G16560,AT3G19820,AT4G15790,AT4G20760,AT1G67150,AT3G43280,AT1G75280,AT3G11340,AT3G29340,AT1G32350,AT1G29370,AT2G25920,AT3G20710,AT4G29080,AT5G20650,AT3G63160,AT1G07370,AT5G44110,AT5G62670,AT5G27360,AT1G34180,AT3G04030,AT5G01260,AT4G38540,AT3G28860,AT5G05770,AT5G36230,AT4G22780,AT2G27860,AT5G37770,AT3G58920,AT5G57220,AT2G04700,AT1G17240,AT4G09990,AT4G28031,AT3G47930,AT1G26990,AT4G29210,AT5G64460,AT4G16920,AT5G44660,AT4G08685,AT4G19530,AT2G32730,AT5G04810,AT1G15870,AT3G27640,AT2G47910,AT4G09910,AT3G11580,AT3G01290,AT5G67430,AT3G27650,AT5G14920,AT3G59340,AT1G30230,AT1G54420,AT1G14440,AT5G39670,AT3G14210,AT1G35720,AT2G15970,AT1G13110,AT1G13970,AT1G30720,AT5G65360,AT1G19540,AT3G54960,AT2G13130,AT1G49940,AT3G25870,AT1G43670,AT3G04730,AT3G59480,AT2G05510,AT2G33570,AT4G27260,AT3G46190,AT3G24540,AT5G57480,AT4G19840,AT5G24230,AT5G26260,AT5G42410,AT5G07440,AT3G44300,AT1G67480,AT3G47480,AT4G30190,AT5G24060,AT5G51020,AT5G04370,AT3G03670,AT3G47250,AT1G52200,AT5G23800,AT1G67590,AT3G16180,AT1G51440,AT2G28970,AT4G01290,AT5G49700,AT5G05960,AT2G34850 MA_HYPOCOTYL_WL/D_DN Down-regulated in Hypocotyl WL Vs. D (TableS8 PubmedID:15888681) AT2G03530,AT4G20430,AT1G53620,AT5G45470,AT3G21330,AT2G16005,AT3G51900,AT5G38200,AT4G17660,AT4G18210,AT5G54620,AT4G14640,AT5G36200,AT1G47530,AT5G43370,AT4G02240,AT3G23930,AT2G30820,AT1G02840,AT2G42110,AT5G40200,AT2G20470,AT4G38400,AT4G25090,AT1G05770,AT2G22900,AT4G07733,AT3G26800,AT1G78620,AT3G55880,AT2G18210,AT4G28025,AT5G51550,AT4G28470,AT1G60590,AT1G72870,AT3G21580,AT4G37980,AT2G46330,AT1G09310,AT4G32605,AT3G59900,AT3G08670,AT1G69560,AT3G23190,AT5G39320,AT2G23300,AT4G11710,AT1G13480,AT5G44350,AT5G64330,AT2G30400,AT4G24720,AT5G63380,AT2G30390,AT2G02270,AT3G07340,AT1G65900,AT3G22690,AT3G03060,AT1G52110,AT3G28910,AT5G60130,AT5G51000,AT5G14740,AT2G34050,AT4G12290,AT1G01570,AT5G53300,AT5G12440,AT4G36880,AT1G79060,AT2G14510,AT5G22020,AT4G14460,AT1G26290,AT3G49960,AT1G09490,AT2G20920,AT4G26520,AT5G03170,AT4G38440,AT2G21655,AT1G65840,AT1G67865,AT2G32240,AT5G05890,AT1G26690,AT5G44310,AT5G52250,AT5G21060,AT5G45500,AT4G25170,AT3G14680,AT2G28780,AT2G25890,AT3G55560,AT1G54240,AT5G41900,AT1G17840,AT1G23330,AT3G54940,AT2G09980,AT3G16640,AT3G52390,AT3G16280,AT1G68100,AT3G24300,AT2G31340,AT5G19260,AT4G24340,AT1G23270,AT1G63690,AT2G43820,AT3G15910,AT1G74790,AT3G12700,AT1G15460,AT5G40780,AT5G39580,AT2G39380,AT1G32070,AT5G14110,AT5G56260,AT5G09280,AT1G53760,AT4G00320,AT1G14520,AT1G11000,AT1G23120,AT3G24503,AT1G14030,AT1G06070,AT3G50060,AT1G05060,AT1G31100,AT3G46270,AT4G14010,AT5G11420,AT2G25050,AT3G17270,AT1G10600,AT4G05130,AT1G04490,AT2G02320,AT4G13290,AT5G24640,AT1G74460,AT1G01560,AT5G38000,AT5G11280,AT2G44370,AT1G13260,AT1G68740,AT2G32880,AT1G58440,AT3G57170,AT3G23560,AT5G67060,AT1G31510,AT3G23170,AT5G67470,AT2G23070,AT2G36970,AT2G32690,AT5G05190,AT3G02620,AT1G04680,AT1G23830,AT3G51160,AT5G14380,AT5G43770,AT1G14920,AT2G19970,AT4G31590,AT3G28070,AT3G14740,AT5G17010,AT2G47000,AT5G43290,AT5G23450,AT3G61390,AT1G54910,AT1G15670,AT3G07720,AT2G44940,AT5G02020,AT2G28960,AT2G40070,AT1G62320,AT3G60520,AT2G35820,AT5G13840,AT3G03800,AT3G13460,AT5G39080,AT3G50500,AT3G29180,AT4G04980,AT5G49800,AT3G02170,AT3G27110,AT2G45660,AT1G80330,AT1G02640,AT1G22990,AT2G33740,AT4G38800,AT4G10850,AT4G36930,AT4G29550,AT1G64740,AT5G02480,AT3G21720,AT3G53250,AT3G49160,AT2G44740,AT2G17460,AT3G10985,AT5G47230,AT5G45490,AT1G27170,AT5G44340,AT1G48620,AT3G25555,AT1G23550,AT5G23370,AT2G34490,AT1G16630,AT2G30810,AT2G44380,AT4G25110,AT1G32430,AT2G35940,AT3G10690,AT2G35300,AT3G52250,AT5G58770,AT5G10260,AT4G01600,AT2G02130,AT1G73210,AT3G29030,AT1G52660,AT5G42830,AT1G61170,AT1G69500,AT4G15270,AT4G26940,AT2G21060,AT4G36510,AT3G05720,AT4G37790,AT5G45820,AT4G05330,AT5G47780,AT5G60760,AT1G04330,AT5G48410,AT3G10470,AT4G16670,AT1G20900,AT2G28890,AT1G17950,AT4G30993,AT2G23460,AT1G64390,AT1G17430,AT2G44790,AT3G05690,AT4G37330,AT3G06990,AT5G59010,AT4G11210,AT5G12250,AT4G14620,AT1G23840,AT1G12250,AT2G42870,AT1G41790,AT5G12950,AT5G42150,AT5G25460,AT4G10510,AT2G40570,AT1G06360,AT1G66600,AT1G05080,AT5G43060,AT5G38010,AT5G52830,AT3G22120,AT4G23830,AT3G60650,AT5G49100,AT2G26560,AT1G54960,AT3G15520,AT5G43620,AT3G56400,AT5G21020,AT1G15110,AT1G02530,AT1G63760,AT1G09390,AT2G23270,AT3G58010,AT1G10910,AT5G26930,AT1G31190,AT5G63020,AT1G11690,AT5G03150,AT4G19140,AT3G61170,AT3G16460,AT5G49665,AT5G22310,AT5G06930,AT2G02680,AT2G07720,AT2G22170,AT5G43550,AT3G57540,AT5G27890,AT1G31170,AT2G40300,AT3G44840,AT3G60200,AT3G25600,AT3G45780,AT1G70950,AT5G47580,AT5G56040,AT1G73120,AT1G14200,AT5G03530,AT5G26250,AT5G38850,AT1G21910,AT2G46130,AT2G35860,AT5G24090,AT3G49930,AT1G75180,AT5G66230,AT1G32230,AT4G28720,AT3G22570,AT1G43700,AT1G68670,AT5G54200,AT1G68530,AT3G47420,AT1G26210,AT4G02630,AT1G23130,AT2G26660,AT5G07770,AT1G02580,AT2G29330,AT4G36060,AT4G30370,AT1G10120,AT2G19000,AT1G60610,AT5G48010,AT2G21020,AT2G47930,AT2G26390,AT2G45420,AT2G02570,AT4G26930,AT1G14400,AT2G18300,AT2G25080,AT2G26400,AT1G21820,AT5G66330,AT2G28690,AT1G76880,AT5G56810,AT1G10200,AT2G05520,AT3G11760,AT2G38830,AT1G33170,AT5G40890,AT1G04300,AT4G23690,AT5G42860,AT4G12880,AT1G49160,AT1G03780,AT1G10455,AT1G76760,AT2G21910,AT4G23680,AT1G09750,AT1G71140,AT1G51940,AT4G16100,AT4G24180,AT2G22680,AT4G16515,AT5G66030,AT1G22880,AT1G72600,AT1G10660,AT3G46700,AT2G28570,AT4G38390,AT4G02470,AT5G19520,AT5G35690,AT2G39210,AT4G38860,AT5G26780,AT2G25260,AT1G01725,AT1G30080,AT2G31280,AT1G13640,AT5G27350,AT2G40940,AT1G19870,AT3G12950,AT1G22550,AT1G62415,AT3G13980,AT2G27190,AT5G59680,AT1G51420,AT5G52990,AT5G14840,AT4G35190,AT1G56670,AT5G20150,AT2G27970,AT1G67980,AT1G12520,AT4G32330,AT3G49860,AT5G39610,AT3G42520,AT5G16370,AT4G36850,AT1G08830,AT5G54470,AT1G10460,AT5G11370,AT1G33970,AT5G10450,AT5G63590,AT1G51200,AT2G15810,AT2G37150,AT4G10020,AT2G39100,AT3G02390,AT5G55850,AT1G18920,AT1G07655,AT1G09050,AT2G19110,AT5G41330,AT1G31175,AT3G16690,AT4G32460,AT4G36890,AT5G61250,AT3G01230,AT5G24530,AT5G54730,AT5G01350,AT2G39440,AT2G42890,AT1G64670,AT2G25590,AT2G33790,AT1G62440,AT4G30140,AT1G68710,AT3G54680,AT4G34330,AT4G27310,AT5G13655,AT2G26240,AT3G55770,AT3G28540,AT3G02810,AT2G17820,AT5G22050,AT4G23820,AT4G12530,AT5G05460,AT2G42400,AT5G51810,AT2G11940,AT3G48100,AT5G23600,AT1G25420,AT1G70330,AT5G04460,AT1G75130,AT2G39940,AT1G67190,AT1G61330,AT4G17880,AT5G66160,AT2G15580,AT4G13570,AT5G08350,AT3G43990,AT4G30360,AT5G22920,AT3G10580,AT3G21260,AT3G07870,AT3G42110,AT4G36900,AT5G16250,AT3G10250,AT5G42560,AT3G43960,AT3G19430,AT4G21170,AT4G23070,AT1G05850,AT1G36640,AT3G53410,AT1G35410,AT1G45130,AT3G57380,AT3G01930,AT2G03590,AT1G56720,AT5G39970,AT2G34730,AT3G42220,AT5G63180,AT5G24210,AT1G42470,AT2G02970,AT3G01770,AT3G01690,AT4G32450,AT1G19400,AT3G43230,AT5G11720,AT1G37000,AT5G12390,AT1G18330,AT5G11000,AT1G23720,AT4G31750,AT5G64180,AT2G02370,AT1G20440,AT4G24220,AT4G29100,AT4G25580,AT4G31370,AT4G20990,AT1G67940,AT1G36980,AT5G26740,AT3G26890,AT2G27430,AT1G78910,AT4G40070,AT1G29280,AT5G10610,AT4G28770,AT2G26220,AT5G02650,AT2G14620,AT1G03890,AT1G64460,AT1G71020,AT1G45015,AT1G77330,AT4G32290,AT4G09830,AT3G57720,AT3G24740,AT1G78840,AT5G46860,AT5G04700,AT2G17350,AT5G41260,AT2G28160,AT1G47630,AT1G03230,AT3G56820,AT1G77820,AT5G07360,AT3G03270,AT3G62650,AT3G50620,AT2G26640,AT4G02780,AT3G49210,AT3G45080,AT3G25290,AT2G25930,AT1G04780,AT5G35030,AT1G27200,AT5G14120,AT3G22750,AT5G30545,AT2G45050,AT5G01880,AT5G60850,AT1G32100,AT1G36380,AT2G45370,AT4G11190,AT3G05990,AT3G07800,AT2G26690,AT1G21060,AT5G60100,AT1G44800,AT1G29760,AT1G29100,AT2G27140,AT5G12870,AT4G35970,AT5G62260,AT5G27320,AT3G53990,AT2G02080,AT3G55420,AT3G61780,AT3G60030,AT1G61900,AT5G66290,AT1G11530,AT4G15650,AT5G17420,AT1G64660,AT4G26060,AT3G51830,AT5G57970,AT1G04400,AT5G23100,AT3G02800,AT3G61000,AT4G19360,AT2G23510,AT5G47370,AT2G01850,AT1G62980,AT1G10920,AT5G59080,AT1G76990,AT2G34610,AT4G21130,AT5G61730,AT5G42030,AT4G31910,AT1G12500,AT3G27050,AT5G42870,AT5G13130,AT5G58520,AT4G12730,AT4G29380,AT3G19190,AT3G46610,AT2G21850,AT1G60060,AT3G60070,AT5G47635,AT5G25810,AT2G42040,AT5G10140,AT3G01670,AT5G15230,AT2G13770,AT1G47310,AT1G68725,AT2G37090,AT5G49720,AT4G25710,AT1G67110,AT3G10040,AT2G24580,AT3G06170,AT3G51500,AT4G38770,AT1G04040,AT2G04410,AT5G22860,AT3G07130,AT5G63190,AT5G17290,AT5G57660,AT5G51150,AT2G18700,AT5G23860,AT1G49660,AT3G18150,AT1G03210,AT4G28840,AT1G10375,AT4G21890,AT2G33990,AT4G18780,AT1G13430,AT5G51520,AT3G19553,AT5G07110,AT3G13450,AT4G39070,AT1G74410,AT3G48390,AT3G07740,AT1G75500,AT1G79380,AT4G24100,AT5G61590,AT5G07010,AT1G28080,AT2G16750,AT5G44680,AT2G47860,AT2G39310,AT1G80380,AT1G13960,AT5G35200,AT5G03960,AT4G17730,AT5G18080,AT1G68300,AT3G15115,AT1G27150,AT3G62460,AT4G34680,AT1G66190,AT5G59880,AT3G26440,AT3G60690,AT1G14280,AT4G00840,AT5G56140,AT5G03180,AT1G29520,AT1G70990,AT2G31350,AT3G55610,AT3G24720,AT4G30290,AT5G01250,AT3G46000,AT1G54100,AT3G27810,AT4G01430,AT5G19120,AT4G28240,AT4G03570,AT1G70690,AT4G00355,AT1G10430,AT5G16600,AT3G44240,AT2G27360,AT5G55860,AT1G73660,AT4G09580,AT4G32150,AT2G02360,AT1G75830,AT3G18260,AT3G56480,AT4G08290,AT2G40900,AT1G79270,AT5G63760,AT5G53110,AT1G21780,AT1G52880,AT1G26670,AT3G56170,AT1G47960,AT2G23410,AT2G38530,AT5G26660,AT4G10170,AT2G16530,AT3G45730,AT4G34770,AT1G22110,AT2G36410,AT5G17550,AT5G66040,AT2G22970,AT3G05250,AT4G10910,AT3G60700,AT2G27920,AT5G07080,AT1G30760,AT3G15070,AT3G18035,AT5G22900,AT1G05570,AT4G12570,AT4G20270,AT4G13310,AT2G03390,AT4G21980,AT1G49130,AT3G18780,AT3G49020,AT5G38100,AT1G69140,AT3G07490,AT4G22810,AT1G68230,AT5G48670,AT1G80280,AT4G28460,AT5G12200,AT4G19950,AT1G53910,AT1G10480,AT1G64330,AT5G59960,AT1G04310,AT5G57330,AT4G21350,AT1G05830,AT5G46040,AT1G76090,AT4G13540,AT2G22180,AT3G51720,AT5G23210,AT1G14890,AT1G24560,AT3G63470,AT1G16170,AT4G22250,AT4G05070,AT5G02360,AT5G58500,AT3G18120,AT4G07820,AT5G09670,AT1G77125,AT1G02610,AT3G12310,AT3G44820,AT3G15580,AT1G32450,AT1G53165,AT3G02040,AT5G46250,AT5G19860,AT5G52690,AT1G05810,AT4G35100,AT3G59260,AT3G50800,AT5G57400,AT5G48280,AT1G13245,AT3G15890,AT3G20570,AT3G02291,AT1G72830,AT3G50560,AT3G07990,AT1G30370,AT2G35680,AT4G36280,AT1G33240,AT1G66140,AT4G31480,AT1G72820,AT4G29260,AT5G05750,AT1G12440,AT2G30230,AT3G58940,AT4G10230,AT3G13710,AT2G01680,AT3G47300,AT3G52920,AT2G39400,AT4G17080,AT5G65390,AT4G24040,AT2G45750,AT3G16240,AT5G52720,AT3G55060,AT1G15380,AT5G48560,AT5G20490,AT2G31980,AT1G01240,AT1G41750,AT5G44250,AT1G05550,AT1G20380,AT4G34530,AT3G19900,AT3G52490,AT2G46310,AT2G15010,AT1G66780,AT1G52190,AT4G02290,AT2G43380,AT5G04750,AT5G16590,AT2G21460,AT3G50330,AT3G17540,AT4G24630,AT5G40450,AT3G47130,AT1G78110,AT3G48810,AT2G15960,AT4G38690,AT1G17970,AT3G27270,AT4G27390,AT3G20250,AT2G38070,AT5G48160,AT3G20390,AT1G23060,AT4G24590,AT3G49040,AT5G05690,AT3G17420,AT4G16190,AT5G55170,AT3G03870,AT1G70300,AT4G40060,AT1G29400,AT2G37950,AT5G43780,AT5G52120,AT4G31240,AT4G40080,AT1G01780,AT4G38470,AT1G08890,AT3G22190,AT1G18470,AT2G48040,AT4G35720,AT4G04220,AT5G54530,AT5G47720,AT1G77690,AT2G21030,AT1G18290,AT1G08630,AT4G37610,AT5G52430,AT1G57980,AT2G23790,AT1G30770,AT3G02550,AT5G48720,AT2G31900,AT5G65210,AT1G72070,AT1G74650,AT1G08500,AT1G64640,AT1G72290,AT2G19250,AT5G42750,AT5G49450,AT5G03230,AT1G32700,AT2G30930,AT2G45170,AT3G04530,AT1G27230,AT5G57510,AT4G27910,AT5G57740,AT3G18200,AT2G45620,AT4G11300,AT5G21940,AT4G25570,AT4G25140,AT3G48360,AT5G67140,AT4G32480,AT1G44160,AT4G11290,AT4G12550,AT2G18280,AT3G27660,AT5G57620,AT2G22660,AT3G48530,AT4G35780,AT1G62480,AT4G33750,AT1G11910,AT1G22490,AT3G28050,AT1G74660,AT1G56220,AT5G28570,AT4G17340,AT1G47860,AT1G11260,AT1G54870,AT2G23290,AT1G51170,AT1G13600,AT4G31250,AT3G57840,AT1G24440,AT2G43610,AT1G75780,AT5G19740,AT5G07820,AT1G21400,AT1G23870,AT1G22330,AT4G19700,AT5G03545,AT3G47340,AT1G35612,AT5G15120,AT4G01330,AT4G23880,AT3G23880,AT1G03380,AT5G06980,AT3G56310,AT3G23800,AT5G65040,AT4G15610,AT2G01480,AT5G06690,AT4G33740,AT2G47160,AT2G25000,AT1G01640,AT1G07648,AT2G38800,AT4G21810,AT1G53035,AT2G28490,AT3G10020,AT1G65600,AT1G14350,AT5G22500,AT4G00150,AT3G30180,AT5G01330,AT4G32860,AT1G13590,AT3G27770,AT1G60140,AT2G01660,AT2G31945,AT1G01390,AT2G03730,AT4G29270,AT1G33050,AT2G24260,AT1G67910,AT4G20140,AT5G15650,AT3G01220,AT4G39090,AT5G18490,AT3G03000,AT3G05157,AT1G18270,AT1G15800,AT3G33025,AT5G47990,AT1G05840,AT1G15350,AT3G54370,AT5G64410,AT1G60010,AT1G04250,AT3G16920,AT5G05110,AT1G20190,AT3G26300,AT3G51840,AT1G10210,AT5G66052,AT4G20250,AT4G02090,AT3G01110,AT4G30410,AT5G57670,AT3G58120,AT5G60420,AT4G12690,AT5G51670,AT2G14900,AT2G17500,AT2G16060,AT4G13660,AT5G52710,AT4G35060,AT4G19670,AT4G34030,AT1G21680,AT2G02560,AT5G04770,AT1G70260,AT3G54770,AT4G01680,AT1G03090,AT3G52520,AT1G20620,AT5G47560,AT2G45510,AT1G49030,AT1G49500,AT5G60020,AT1G75540,AT1G44770,AT1G22530,AT2G47600,AT1G03790,AT2G04800,AT5G49710,AT1G62380,AT2G46550,AT1G63800,AT2G21540,AT5G14190,AT1G55810,AT3G16850,AT5G11920,AT5G23230,AT4G33560,AT1G17810,AT1G15740,AT1G50420,AT4G25260,AT3G52480,AT5G02540,AT1G34040,AT3G19370,AT2G01890,AT5G42590,AT3G51400,AT5G66590,AT3G21870,AT5G37790,AT1G62045,AT4G33070,AT1G76410,AT1G10020,AT5G56540,AT3G30390,AT5G16110,AT1G01620,AT1G12780,AT4G20820,AT3G61260,AT1G77120,AT4G17220,AT2G45180,AT1G08990,AT1G09460,AT1G15045,AT4G37890,AT5G53660,AT4G32780,AT2G17440,AT5G06200,AT4G05150,AT4G27470,AT1G73260,AT4G04955,AT5G20620,AT2G01530,AT1G04710,AT1G68360,AT4G37700,AT2G36320,AT1G20520,AT3G06850,AT4G33150,AT3G46130,AT4G38060,AT4G20840,AT1G80440,AT4G26740,AT3G20015,AT4G19420,AT1G10550,AT3G56350,AT4G19160,AT5G57240,AT3G32980,AT3G13445,AT2G44130,AT5G25160,AT4G31380,AT3G05150,AT4G25780,AT1G53700,AT2G04690,AT3G01520,AT4G24230,AT3G01400,AT3G04060,AT2G02710,AT5G62900,AT1G68250,AT1G36060,AT3G17790,AT3G61430,AT5G55770,AT4G18965,AT1G32170,AT1G74840,AT5G14180,AT5G67190,AT5G28020,AT3G42970,AT5G35660,AT4G16520,AT2G14870,AT4G32940,AT2G45210,AT1G21360,AT5G24730,AT4G02075,AT1G67030,AT4G26320,AT2G39570,AT5G59090,AT1G06980,AT2G25900,AT5G46050,AT3G49790,AT2G15890,AT4G23870,AT1G26980,AT3G59690,AT1G02200,AT5G43520,AT1G58032,AT1G70840,AT1G10140,AT1G76460,AT1G52750,AT5G02090,AT2G38400,AT1G61590,AT3G24580,AT3G63210,AT2G17710,AT4G30270,AT3G60550,AT5G10430,AT1G62770,AT3G26720,AT3G43670,AT1G62510,AT3G55230,AT1G74940,AT1G03110,AT5G23660,AT1G70830,AT1G78290,AT1G28100,AT1G35950,AT1G27030,AT2G24460,AT5G59780,AT4G13580,AT1G46768,AT4G13030,AT1G08590,AT2G32300,AT4G20110,AT1G72150,AT3G24020,AT2G25150,AT5G20250,AT5G40690,AT5G02580,AT4G11620,AT5G40590,AT4G37070,AT3G48020,AT5G44130,AT2G28670,AT2G05580,AT5G57655,AT5G53190,AT4G30420,AT1G76220,AT5G50700,AT3G53420,AT5G09440,AT4G14130,AT4G12470,AT5G63800,AT5G60740,AT5G57685,AT3G58910,AT4G22460,AT3G60140,AT5G04470,AT4G11320,AT4G20260,AT3G42060,AT1G56010,AT4G30170,AT2G28110,AT3G26510,AT4G08300,AT5G43540,AT5G56870,AT1G01180,AT2G18050,AT5G44120,AT5G62280,AT4G30280,AT5G08460,AT3G16770,AT3G11550,AT1G53830,AT1G25230,AT3G26520,AT1G12090,AT1G69490,AT1G28330,AT1G03880,AT5G65480,AT4G35750,AT3G11930,AT5G23730,AT5G25870,AT1G72200,AT3G22640,AT5G14780,AT3G15510,AT1G48260,AT1G73220,AT3G03470,AT2G37750,AT1G10070,AT3G52060,AT5G10770,AT5G04120,AT5G19890,AT5G64570,AT5G56100,AT4G27150,AT4G28040,AT2G20080,AT4G23400,AT1G71030,AT5G53250,AT1G33055,AT4G28520,AT2G37130,AT4G27450,AT5G54740,AT3G05920,AT3G15450,AT2G20670,AT4G09610,AT5G44440,AT2G33830,AT2G05540,AT5G49360,AT1G19530,AT2G21140,AT1G02340,AT5G60660,AT5G54190,AT3G48740,AT5G46900,AT5G47450,AT4G12520,AT3G19410,AT2G43050 MA_ROOT_WL/D_UP Up-regulated in Root WL Vs. D (TableS8 PubmedID:15888681) AT5G13930,AT3G49630,AT3G55120,AT3G45160,AT4G34950,AT1G13930,AT5G15970,AT5G52020,AT3G57020,AT3G25830,AT2G22760,AT5G44110,AT4G28250,AT1G70430,AT5G14740,AT5G08640,AT1G14120,AT3G44860,AT5G05270,AT5G37990,AT1G18870,AT4G34410,AT3G52740,AT5G63450,AT4G37410,AT1G54040,AT4G13290,AT2G34810,AT1G10960,AT2G24850,AT2G02270,AT3G32090,AT5G61110,AT3G17270,AT5G16010,AT5G64940,AT4G24380,AT1G12370,AT1G65060,AT4G21130,AT2G44940,AT1G62975,AT3G02810,AT1G17380,AT1G79040,AT1G17420,AT1G73330,AT2G34420,AT5G02270,AT5G13220,AT5G24780,AT1G35250,AT5G05410,AT2G42760,AT5G38000,AT5G13630,AT1G59860,AT4G29780,AT4G27570,AT3G58140,AT4G28940,AT5G38020,AT3G21560,AT1G34000,AT4G22460,AT3G33025,AT5G52050,AT4G37470,AT5G24770,AT1G70700,AT2G18210,AT4G17250,AT3G44870,AT1G64590,AT4G30650,AT2G40080,AT5G07030,AT4G27520,AT5G36200,AT5G25810,AT2G26150,AT5G59250,AT3G56290,AT5G48300,AT5G11070,AT3G51820,AT1G06680,AT5G52250,AT3G61220,AT5G23010,AT5G04120,AT5G37550,AT2G32530,AT2G26900,AT1G61520,AT2G20880,AT1G61340,AT4G09820,AT3G23530,AT3G23840,AT5G65280,AT4G13770,AT3G23170,AT3G58550,AT5G62360,AT5G17780,AT2G43100,AT2G15970,AT5G22020,AT2G46420,AT5G47980,AT2G16660,AT2G22970,AT4G27560,AT2G16005,AT1G43160,AT3G55980,AT1G19570,AT4G17615,AT4G23220,AT1G10370,AT5G16250,AT3G12580,AT3G26330,AT2G36250,AT2G41800,AT3G26290,AT3G62760,AT2G22170,AT1G26980,AT5G48880,AT3G61820,AT3G01830,AT2G14290,AT1G31330,AT1G04330,AT2G40460,AT3G45960,AT5G60890,AT5G58778,AT3G02830,AT5G43690,AT1G67360,AT1G35720,AT1G18300,AT3G23400,AT2G38750,AT1G76790,AT2G23630,AT3G50060,AT5G10170,AT4G10910,AT1G22150,AT1G22880,AT5G62350,AT5G40390,AT4G11280,AT4G11320,AT1G61890,AT4G23680,AT5G66570,AT5G37700,AT2G33580,AT2G23050,AT1G08380,AT4G11780,AT4G25140,AT2G23120,AT4G21890,AT4G12600,AT5G23020,AT2G02130,AT1G76080,AT1G68430,AT5G12110,AT4G11710,AT2G33530,AT1G65860,AT2G34850,AT1G79470,AT2G39730,AT5G59480,AT3G48520,AT1G20520,AT1G80340,AT1G78370,AT5G24160,AT1G11140,AT5G20240,AT3G55605,AT1G07135,AT1G48630,AT4G04830,AT5G08760,AT5G64330,AT1G61580,AT2G32990,AT5G10130,AT1G20815,AT4G02780,AT2G46340,AT4G33560,AT5G61420,AT2G42710,AT3G44590,AT4G30660,AT2G35930,AT5G43420,AT5G37770,AT3G47540,AT2G40300,AT4G24340,AT1G11670,AT5G13700,AT2G31790,AT3G21800,AT3G13470,AT1G42375,AT1G55020,AT2G01150,AT1G17190,AT5G63560,AT2G33200,AT4G09480,AT1G68740,AT5G14200,AT1G70610,AT2G25980,AT5G28590,AT2G17660,AT2G23910,AT2G11940,AT3G45080,AT5G09670,AT4G28840,AT5G58770,AT3G15840,AT2G26690,AT3G50300,AT5G48010,AT5G04000,AT5G20070,AT1G16000,AT3G05730,AT5G44130,AT3G14200,AT1G79310,AT2G30040,AT4G32330,AT4G13010,AT1G78630,AT1G05550,AT4G29690,AT3G25780,AT1G74310,AT2G47950,AT5G17350,AT1G30360,AT3G27650,AT4G12310,AT1G20440,AT1G72450,AT3G49090,AT3G54020,AT3G24500,AT4G25890,AT5G09980,AT1G01470,AT1G27730,AT3G18130,AT4G37700,AT2G33620,AT3G06030,AT2G46240,AT1G18140,AT2G16740,AT1G56670,AT3G51450,AT1G66760,AT4G26780,AT2G21460,AT2G22330,AT4G11210,AT1G55210,AT5G51040,AT4G26210,AT2G22930,AT5G14580,AT2G07720,AT1G20030,AT1G74430,AT3G20260,AT2G39510,AT1G28480,AT1G74500,AT5G10260,AT1G06430,AT4G30280,AT4G08170,AT4G19360,AT5G44840,AT3G23990,AT2G18370,AT3G44750,AT3G23830,AT3G16780,AT5G23370,AT4G28660,AT4G29670,AT5G42650,AT5G36140,AT2G46860,AT5G58070,AT4G01660,AT1G16960,AT1G11840,AT1G20680,AT1G78915,AT1G78070,AT3G15530,AT3G09940,AT1G58270,AT5G52140,AT1G17100,AT3G54390,AT1G31700,AT1G48750,AT4G27720,AT5G62220,AT2G27710,AT2G19310,AT2G43480,AT1G69230,AT4G38400,AT3G46230,AT1G20310,AT3G28900,AT3G43960,AT5G26260,AT2G27080,AT4G29700,AT2G47110,AT2G31340,AT2G35860,AT1G72520,AT3G05060,AT5G66590,AT4G31795,AT3G49160,AT4G01050,AT1G68120,AT4G02770,AT4G23620,AT2G19000,AT4G20430,AT5G01040,AT1G14060,AT4G30810,AT3G52390,AT3G16080,AT5G22740,AT3G50800,AT1G63000,AT1G21440,AT2G29530,AT1G09795,AT1G05210,AT3G03780,AT4G38740,AT2G27840,AT1G55480,AT3G52590,AT2G34430,AT1G49410,AT5G38010,AT3G29320,AT1G03630,AT3G47130,AT1G19180,AT1G59725,AT4G35950,AT1G61930,AT1G77430,AT1G54240,AT4G00370,AT1G31710,AT4G08685,AT4G36710,AT5G65360,AT3G03060,AT1G51090,AT3G16410,AT4G30220,AT1G49940,AT1G32450,AT5G65470,AT1G04270,AT5G28570,AT4G37910,AT3G57540,AT4G26930,AT1G10455,AT2G30570,AT2G44120,AT4G13420,AT1G32220,AT2G24820,AT1G65900,AT4G13550,AT3G25555,AT2G22880,AT1G53300,AT5G05770,AT1G68840,AT3G02020,AT1G60770,AT1G14520,AT4G14640,AT1G64390,AT3G54960,AT4G25340,AT5G59550,AT4G09910,AT5G63590,AT1G10030,AT1G15460,AT3G61100,AT3G51740,AT5G15530,AT5G28510,AT5G47700,AT2G33570,AT3G16050,AT4G14420,AT5G09590,AT4G31780,AT4G12880,AT1G03780,AT1G70950,AT5G56670,AT2G39980,AT1G04430,AT4G03060,AT4G19980,AT4G07733,AT5G48850,AT1G49620,AT4G18010,AT2G45750,AT2G43550,AT5G02790,AT2G36170,AT5G02050,AT3G47960,AT1G16630,AT4G29680,AT2G30390,AT3G23390,AT2G17170,AT1G09160,AT4G24140,AT5G58670,AT4G12030,AT2G21960,AT5G57440,AT5G48000,AT4G09160,AT4G20220,AT5G55280,AT1G22550,AT5G12950,AT1G12240,AT3G27540,AT5G43620,AT2G05990,AT2G47890,AT4G11990,AT4G00810,AT4G15000,AT5G63380,AT3G19370,AT3G25190,AT2G18400,AT2G27970,AT3G19800,AT5G23740,AT1G48350,AT4G24110,AT2G10060,AT1G20380,AT4G29080,AT1G42970,AT4G33550,AT3G15350,AT5G14150,AT5G56940,AT1G03840,AT1G33170,AT1G56660,AT3G61870,AT3G03800,AT5G52280,AT3G19330,AT5G08040,AT1G64650,AT4G38460,AT1G53840,AT3G16400,AT4G02500,AT4G25050,AT5G39320,AT5G26800,AT2G35790,AT5G02610,AT2G42110,AT2G22500,AT4G29430,AT5G17460,AT4G14320,AT5G22900,AT1G26880,AT2G46650,AT5G35490,AT3G10710,AT2G25920,AT1G44350,AT1G07370,AT5G37800,AT2G28000,AT3G49960,AT3G28070,AT4G12730,AT5G14110,AT5G13840,AT3G22690,AT5G09480,AT2G18410,AT3G55750,AT3G45140,AT5G53650,AT3G54810,AT3G22310,AT1G49290,AT5G50101,AT1G78560,AT1G32430,AT4G11190,AT1G31175,AT1G16400,AT2G01290,AT4G24830,AT5G43150,AT5G26250,AT1G23750,AT2G37270,AT5G05960,AT5G01330,AT2G20450,AT3G19170,AT1G16720,AT5G64850,AT3G46700,AT1G07070,AT2G01250,AT1G64880,AT5G17670,AT2G35290,AT1G70480,AT3G18940,AT2G35450,AT1G21500,AT2G48090,AT1G23740,AT5G51100,AT5G08020,AT2G25150,AT1G53240,AT2G32730,AT3G30640,AT1G23330,AT5G45775,AT5G48910,AT5G16590,AT3G22830,AT3G54050,AT2G38360,AT5G47930,AT2G39310,AT4G26510,AT5G17870,AT1G42480,AT5G54470,AT3G21890,AT5G40200,AT2G15440,AT4G32605,AT1G21880,AT1G64170,AT1G11460,AT5G17000,AT5G06870,AT5G08050,AT4G20820,AT4G20760,AT2G16350,AT2G35120,AT4G16100,AT3G06700,AT3G61640,AT3G56340,AT3G07750,AT2G32060,AT2G20470,AT3G26060,AT1G19950,AT4G34260,AT1G08920,AT5G23820,AT5G61790,AT4G09990,AT3G21750,AT5G67080,AT2G19740,AT1G58440,AT5G60670,AT1G32900,AT5G55560,AT1G13970,AT3G47930,AT3G09200,AT2G34490,AT4G37760,AT5G64670,AT1G31510,AT2G34610,AT5G59850,AT5G15520,AT3G57640,AT1G09760,AT1G78280,AT2G30950,AT1G08400,AT3G15810,AT3G02350,AT1G11690,AT3G03630,AT3G48930,AT1G72640,AT4G18100,AT3G24830,AT1G14200,AT5G61130,AT3G18080,AT5G37020,AT3G57520,AT5G52650,AT5G10380,AT5G44350,AT5G46450,AT4G05180,AT2G29500,AT3G05720,AT2G34050,AT4G10620,AT1G63720,AT1G65700,AT1G01100,AT5G22310,AT3G14420,AT3G10470,AT4G31840,AT3G12370,AT2G35240,AT3G27640,AT1G53760,AT1G04490,AT4G19810,AT5G56760,AT5G66230,AT3G04400,AT2G40840,AT5G42860,AT1G75780,AT5G39550,AT2G19250,AT5G60960,AT1G67740,AT4G01360,AT5G62670,AT1G29470,AT4G01900,AT3G10930,AT1G16410,AT4G31985,AT3G54250,AT5G40480,AT1G80820,AT3G49180,AT5G56260,AT5G35475,AT3G08990,AT4G14140,AT1G18250,AT5G47230,AT3G23670,AT3G57450,AT1G10600,AT5G63660,AT1G15870,AT1G30120,AT5G66460,AT4G12520,AT2G23600,AT2G14750,AT5G22440,AT5G03545,AT5G53750,AT5G47990,AT2G39460,AT4G10300,AT5G07090,AT2G29980,AT5G38980,AT1G22490,AT1G56340,AT4G29400,AT4G05100,AT4G39840,AT2G21130,AT5G01730,AT5G24380,AT3G63470,AT3G20370,AT5G52580,AT2G02740,AT2G32220,AT1G63650,AT5G53050,AT5G15090,AT3G52960,AT3G25250,AT3G19970,AT2G25460,AT4G00670,AT2G41840,AT5G16130,AT5G61780,AT4G17880,AT3G50820,AT4G07780,AT2G37190,AT3G61170,AT2G37600,AT5G63700,AT2G25210,AT3G49570,AT4G13930,AT5G13190,AT2G43530,AT1G18540,AT5G50670,AT5G05590,AT5G20290,AT5G06930,AT1G15980,AT4G34190,AT1G68590,AT4G19530,AT4G39940,AT4G01850,AT4G26320,AT5G01210,AT4G09650,AT5G05890,AT4G37200,AT1G14830,AT5G54510,AT2G19730,AT4G21840,AT5G24290,AT1G77590,AT3G20390,AT3G14740,AT1G35950,AT1G62560,AT3G18200,AT3G18830,AT2G26530,AT1G67190,AT5G65310,AT4G15320,AT2G43560,AT2G26740,AT5G15650,AT1G09850,AT1G08290,AT5G53250,AT5G54770,AT1G50900,AT2G45870,AT4G22212,AT4G12800,AT3G25530,AT3G44240,AT1G68725,AT3G07770,AT2G23670,AT4G33260,AT1G70600,AT3G24270,AT1G32440,AT2G03530,AT4G29410,AT1G27030,AT3G23250,AT3G08740,AT5G35735,AT5G04770,AT1G67590,AT5G05600,AT5G66190,AT3G02840,AT5G56540,AT3G50675,AT5G06530,AT2G43380,AT1G76450,AT4G34710,AT3G09500,AT5G36920,AT3G56910,AT1G12090,AT1G23850,AT3G04840,AT1G56300,AT2G36160,AT2G16430,AT3G27810,AT1G80270,AT2G46100,AT1G53890,AT3G55510,AT1G04040,AT2G21030,AT3G58790,AT4G36510,AT1G75280,AT1G32990,AT5G52310,AT3G17110,AT1G34040,AT4G17000,AT3G49910,AT1G56600,AT1G08500,AT2G47060,AT1G08990,AT4G14950,AT1G57820,AT3G54770,AT2G04390,AT3G56940,AT2G35210,AT4G04610,AT1G55670,AT3G47420,AT4G10340,AT4G36830,AT5G22050,AT1G08560,AT1G27350,AT4G02530,AT1G71030,AT5G52430,AT3G16690,AT4G13800,AT3G22790,AT2G34770,AT2G45050,AT5G48360,AT1G77670,AT5G45110,AT4G33680,AT3G07110,AT5G38710,AT3G08940,AT2G27190,AT5G65810,AT5G14370,AT5G11420,AT2G21850,AT5G65010,AT5G26780,AT3G50760,AT5G06110,AT5G64040,AT3G58990,AT3G17420,AT5G12870,AT5G19260,AT5G23800,AT2G21170,AT5G49910,AT4G15790,AT1G56500,AT1G76090,AT1G74730,AT3G58660,AT3G12145,AT3G63410,AT1G55290,AT1G04420,AT3G06730,AT4G26230,AT1G69700,AT5G07020,AT4G21940,AT2G22900,AT3G53190,AT2G31900,AT1G26850,AT5G11740,AT1G62440,AT5G23310,AT2G32880,AT4G29270,AT1G04710,AT1G12250,AT1G23550,AT4G01990,AT3G62530,AT4G38410,AT2G17500,AT1G09415,AT5G14910,AT3G18260,AT2G15580,AT4G00320,AT3G62250,AT4G30530,AT3G14600,AT5G49100,AT2G30820,AT4G24960,AT1G79140,AT3G59760,AT5G57110,AT3G07800,AT1G23270,AT4G17300,AT5G50740,AT5G27520,AT5G13120,AT2G21580,AT1G70130,AT1G15140,AT5G17630,AT5G63980,AT4G05330,AT5G22690,AT1G09390,AT3G52520,AT4G01680,AT1G78140,AT1G15500,AT5G22860,AT1G49600,AT3G58920,AT1G77990,AT2G38140,AT2G35260,AT5G37790,AT1G20340,AT3G26650,AT2G05440,AT4G39200,AT1G68830,AT4G34870,AT4G36530,AT1G52000,AT5G07110,AT1G36060,AT5G48470,AT5G02450,AT1G03990,AT5G42590,AT5G01260,AT2G47090,AT4G29070,AT5G13990,AT1G49660,AT1G12900,AT1G61330,AT4G37930,AT5G39790,AT1G67865,AT3G15790,AT5G28520,AT5G64570,AT5G42030,AT5G11880,AT5G23530,AT3G50970,AT2G43510,AT1G12500,AT4G00150,AT4G19020,AT5G48760,AT2G35840,AT1G79850,AT5G17521,AT5G65700,AT2G15290,AT1G17750,AT2G30360,AT4G34290,AT2G39030,AT5G44780,AT5G26740,AT5G13490,AT2G06200,AT1G35560,AT5G02160,AT1G76880,AT2G06520,AT1G22500,AT1G78210,AT5G52320,AT5G22630,AT5G49800,AT5G64080,AT2G28790,AT3G57610,AT4G04790,AT4G19140,AT2G47590,AT3G57050,AT3G16240,AT3G17790,AT3G01220,AT5G54270,AT2G33850,AT1G68010,AT5G51440,AT3G19830,AT3G23295,AT2G20270,AT5G13200,AT2G20080,AT4G31590,AT4G10000,AT5G14060,AT1G31090,AT1G18710,AT5G59120,AT5G67470,AT4G25260,AT5G38510,AT5G59320,AT3G60550,AT4G34330,AT3G53890,AT5G27890,AT1G41870,AT5G55120,AT1G11960,AT4G17240,AT3G07490,AT3G59340,AT1G65870,AT1G32080,AT1G05850,AT1G09780,AT5G19510,AT3G09630,AT1G02640,AT5G12250,AT3G07740,AT1G52750,AT5G13510,AT1G76220,AT3G26570,AT4G25580,AT2G21340,AT1G52110,AT1G76160,AT5G60420,AT4G04640,AT5G07820,AT1G64640,AT1G66160,AT2G01890,AT5G22620,AT5G60130,AT1G47530,AT1G10375,AT5G47220,AT3G19820,AT5G09650,AT3G18560,AT3G42650,AT1G65400,AT2G22180,AT1G24330,AT5G62300,AT5G03170,AT3G16280,AT1G28570,AT5G57740,AT1G32550,AT4G03050,AT2G37130,AT5G22190,AT5G64410,AT3G49680,AT3G01280,AT3G43670,AT1G26930,AT1G21910,AT1G73325,AT3G25500,AT2G01530,AT1G79550,AT1G31230,AT1G23180,AT4G34590,AT5G51000,AT4G25290,AT1G60270,AT2G41710,AT2G02810,AT3G63160,AT1G18590,AT5G19370,AT4G24920,AT5G59070,AT4G30993,AT4G24780,AT4G08290,AT1G54960,AT3G27925,AT3G61260,AT2G44130,AT2G47600,AT5G41070,AT2G30860,AT5G52410,AT5G64460,AT1G63610,AT5G46430,AT4G35060,AT1G70990,AT1G73210,AT1G29040,AT1G10120,AT4G13170,AT1G74980,AT3G04710,AT1G76420,AT3G01670,AT3G17040,AT1G04250,AT2G24580,AT5G59010,AT2G46150,AT4G35970,AT4G17600,AT3G25290,AT1G18060,AT5G04140,AT4G39070,AT5G54200,AT4G23190,AT4G11050,AT1G51000,AT4G25780,AT2G43620,AT3G49040,AT1G53830,AT2G09980,AT3G59260,AT5G47370,AT4G22590,AT1G56580,AT1G60590,AT5G35540,AT1G63880,AT5G65870,AT4G14130,AT2G27430,AT1G28290,AT3G50930,AT5G54180,AT2G32480,AT3G46970,AT1G30330,AT5G20150,AT3G55040,AT3G52750,AT2G23930,AT4G11620,AT1G17970,AT5G54390,AT1G34420,AT5G40950,AT1G21350,AT5G52970,AT3G28220,AT4G22610,AT1G35612,AT5G33320,AT5G17830,AT3G21870,AT5G14840,AT2G42040,AT1G48920,AT4G26940,AT5G04700,AT3G55420,AT1G65260,AT5G10770,AT3G18620,AT1G15440,AT1G59960,AT1G62320,AT5G65990,AT1G62510,AT3G16860,AT1G31825,AT1G45130,AT3G28860,AT4G36220,AT3G20710,AT4G21990,AT5G58500,AT4G25130,AT4G37980,AT1G08890,AT1G28390,AT2G32130,AT1G63970,AT5G11280,AT5G47910,AT4G30290,AT1G59790,AT1G79060,AT1G71020,AT1G66080,AT1G23020,AT1G11580,AT1G14410,AT3G28540,AT3G27850,AT5G15080,AT2G41380,AT5G43030,AT3G56480,AT4G36240,AT3G54880,AT4G13430,AT4G12530,AT2G30230,AT5G62700,AT2G27360,AT5G02540,AT5G47780,AT5G13800,AT1G42310,AT4G28720,AT4G33010,AT5G62630,AT4G36900,AT5G50890,AT1G32240,AT2G14620,AT1G21820,AT2G02320,AT1G54020,AT1G54000,AT4G25730,AT4G15920,AT4G29260,AT4G27310,AT2G45220,AT2G20260,AT5G27360,AT1G09340,AT4G30420,AT5G19220,AT1G53700,AT4G24130,AT4G21870,AT2G14900,AT4G03280,AT1G67020,AT5G45060,AT3G13110,AT1G72280,AT1G04680,AT1G30580,AT3G19710,AT5G06200,AT2G32190,AT5G34800,AT5G56040,AT5G19120,AT2G27140,AT2G42870,AT1G59124,AT1G76680,AT1G51940,AT2G02500,AT1G67700,AT3G53990,AT3G25600,AT1G80300,AT3G18890,AT5G24420,AT3G55880,AT4G27910,AT5G48930,AT1G05770,AT2G39440,AT4G19420,AT3G43600,AT3G53260,AT5G23960,AT5G49630,AT3G49430,AT2G17460,AT1G09750,AT3G07990,AT1G73060,AT2G01110,AT4G22240,AT1G48030,AT2G01180,AT3G02000,AT1G77090,AT3G23580,AT2G38230,AT3G58010,AT5G11000,AT1G09490,AT3G01930,AT3G58120,AT5G21060,AT3G08030,AT1G17290,AT3G28270,AT3G24720,AT1G33240,AT4G28780,AT3G62650,AT1G58420,AT5G44720,AT2G37090,AT1G10140,AT4G02290,AT3G42990,AT5G09530,AT5G30584,AT3G62230,AT2G41880,AT3G22570,AT4G37610,AT3G03580,AT1G01610,AT5G62280,AT4G30490,AT3G22550,AT2G13130,AT2G37180,AT2G23460,AT2G35940,AT3G22960,AT3G55330,AT5G02950,AT5G63800,AT5G13130,AT1G35680,AT4G17090,AT1G66780,AT1G31190,AT1G68670,AT1G13710,AT5G44660,AT1G18210,AT2G22470,AT4G17050,AT5G58900,AT5G46730,AT2G31040,AT4G31750,AT1G02560,AT1G61170,AT1G75860,AT2G30810,AT3G18120,AT5G03530,AT3G07340,AT1G47630,AT1G05810,AT4G24930,AT5G44340,AT2G34120,AT5G10430,AT4G30360,AT1G15110,AT1G43330,AT4G27070,AT2G33990,AT1G34560,AT2G40070,AT5G47500,AT5G55840,AT5G40110,AT5G04590,AT4G20840,AT1G02465,AT4G14040,AT4G37800,AT1G69840,AT5G58960,AT5G51670,AT3G25760,AT2G03590,AT2G20670,AT3G26080,AT3G51720,AT1G78620,AT5G23850,AT1G62045,AT5G50730,AT5G51810,AT4G21860,AT1G72820,AT4G20860,AT2G16750,AT1G70820,AT4G23180,AT1G18330,AT1G71290,AT4G36280,AT2G26660,AT2G47930,AT3G21230,AT4G11290,AT2G27550,AT5G19520,AT5G16600,AT5G02240,AT1G79270,AT4G01700,AT4G28590,AT3G08670,AT3G42220,AT5G51820,AT1G54420,AT2G41680,AT3G21470,AT5G57400,AT1G29520,AT2G23290,AT1G25230,AT1G75580,AT5G16540,AT1G18290,AT3G05920,AT1G01570,AT1G77060,AT4G02090,AT5G53880,AT1G77330,AT2G01660,AT5G65390,AT1G14250,AT1G44930,AT1G70330,AT5G23100,AT5G23210,AT3G22850,AT3G15890,AT1G06980,AT5G11590,AT3G02040,AT1G26290,AT3G28510,AT1G52660,AT1G11000,AT1G26690,AT4G35100,AT3G03000,AT3G44820,AT1G01790,AT1G03110,AT5G47840,AT4G27390,AT3G44970,AT1G29700,AT5G52710,AT1G68360,AT5G52120,AT5G48560,AT4G02075,AT5G28020,AT3G07130,AT5G62390,AT3G17820,AT3G15520,AT4G38690,AT4G13580,AT5G46110,AT5G23860,AT4G21440,AT4G38440,AT1G75240,AT2G25050,AT3G15070,AT3G16460,AT2G40520,AT3G59900,AT4G39950,AT5G53190,AT5G12200,AT3G24580,AT5G12860,AT1G11530,AT4G01250,AT3G50910,AT4G22990,AT1G04350,AT2G21330,AT1G10430,AT1G78970,AT1G63940,AT2G23410,AT1G64680,AT2G22210,AT3G02170,AT3G48500,AT4G24770,AT5G01870,AT1G67910,AT5G61810,AT5G02360,AT3G22240,AT1G63800,AT3G02730,AT5G41970,AT1G47860,AT4G20270,AT1G56190,AT3G16180,AT4G02230,AT1G54090,AT4G23400,AT1G23830,AT1G14440,AT4G28770,AT2G43030,AT4G04955,AT1G77490,AT3G12950,AT4G21280,AT3G03270,AT3G27110,AT5G04810,AT1G74660,AT1G16080,AT3G04210,AT5G15230,AT5G42980,AT4G02630,AT2G37030,AT1G24520,AT1G50660,AT4G02940,AT1G52510,AT4G16950,AT1G27200,AT2G43020,AT3G55060,AT1G62180,AT2G22660,AT5G27380,AT1G64460,AT3G10120,AT5G43060,AT3G10690,AT5G17420,AT1G06830,AT3G10595,AT1G45015,AT4G25570,AT3G57720,AT1G65560,AT3G16920,AT5G66290,AT5G57970,AT4G29210,AT1G52720,AT1G10200,AT5G51750,AT4G27870,AT2G37770,AT2G25930,AT1G75040,AT4G13660,AT4G10230,AT4G23820,AT1G05800,AT1G64330,AT5G54170,AT2G14020,AT3G09390,AT1G23310,AT1G73660,AT1G20190,AT1G74890,AT2G21280,AT1G76930,AT4G25710,AT1G03180,AT2G23510,AT1G77820,AT4G24220,AT2G34860,AT1G35410,AT5G40890,AT2G04800,AT5G09440,AT5G66330,AT1G01620,AT2G21060,AT3G55840,AT5G49080,AT1G65600,AT2G35070,AT5G35890,AT1G26210,AT2G35750,AT4G26520,AT1G23840,AT1G19870,AT4G16870,AT1G03210,AT3G20015,AT1G29780,AT1G10550,AT1G63360,AT1G73220,AT1G08590,AT2G04700,AT3G05250,AT5G40540,AT4G20990 MA_ROOT_WL/D_DN Down-regulated in Root WL Vs. D (TableS8 PubmedID:15888681) AT4G20140,AT4G36890,AT3G49860,AT2G48040,AT1G28380,AT5G17760,AT1G22330,AT1G78020,AT1G22530,AT4G35630,AT5G35630,AT1G31170,AT4G14690,AT2G40900,AT2G14860,AT1G35290,AT5G04460,AT5G39970,AT5G22920,AT5G47635,AT1G21060,AT3G60070,AT4G21810,AT4G16670,AT1G10660,AT2G40940,AT1G51820,AT3G62460,AT2G10650,AT3G50560,AT1G32500,AT5G20490,AT5G19740,AT1G49500,AT2G25590,AT1G03360,AT2G26220,AT5G41080,AT1G32100,AT4G36850,AT1G62360,AT4G35750,AT1G76620,AT3G11550,AT1G68300,AT1G03680,AT3G19430,AT4G18780,AT3G42110,AT5G03180,AT2G44740,AT3G52180,AT5G46900,AT5G06690,AT3G20570,AT1G53910,AT2G05310,AT3G11580,AT1G24020,AT1G15290,AT5G55770,AT1G75500,AT2G27920,AT1G29760,AT1G30080,AT1G79770,AT1G68945,AT2G16280,AT4G31820,AT2G27860,AT1G30820,AT2G42220,AT3G25870,AT3G06050,AT2G26640,AT5G44680,AT5G51020,AT4G11570,AT5G49080,AT1G49750,AT5G25460,AT4G31480,AT3G49930,AT3G14520,AT5G49720,AT5G48280,AT1G65890,AT5G26660,AT3G56170,AT5G08350,AT2G05950,AT3G53250,AT4G18810,AT5G18490,AT5G64180,AT5G59520,AT2G01850,AT3G26840,AT1G24967,AT1G20900,AT5G57040,AT5G58520,AT1G02840,AT2G39940,AT3G47340,AT2G02360,AT5G67370,AT2G02970,AT5G56870,AT4G30410,AT1G62980,AT2G22680,AT1G61900,AT1G77125,AT5G15450,AT1G74440,AT2G39570,AT5G52990,AT1G06650,AT5G08460,AT1G32480,AT1G75130,AT3G51830,AT1G23060,AT1G52400,AT5G45340,AT1G66090,AT5G41900,AT3G45780,AT1G14350,AT1G78110,AT3G51500,AT3G48100,AT4G22780,AT2G38070,AT5G16560,AT4G07640,AT5G41330,AT1G78910,AT4G13490,AT4G23870,AT1G35310,AT1G66190,AT5G20900,AT5G19860,AT1G30370,AT5G44950,AT1G74940,AT1G13650,AT3G53410,AT1G36380,AT1G06460,AT3G15110,AT1G13610,AT3G24020,AT2G36580,AT4G22490,AT2G05620,AT1G70410,AT5G23070,AT5G55050,AT1G01780,AT1G75540,AT1G14040,AT1G37200,AT3G47300,AT1G72115,AT4G10170,AT3G60520,AT4G20710,AT5G44870,AT3G05150,AT1G68710,AT2G27290,AT5G15160,AT3G57550,AT1G16170,AT3G18150,AT3G50620,AT2G17440,AT5G52690,AT1G44940,AT3G54890,AT1G77760,AT1G76130,AT3G13445,AT2G01680,AT2G22250,AT5G53300,AT3G02390,AT3G60650,AT1G33280,AT4G22020,AT1G31650,AT1G75460,AT2G10890,AT5G13650,AT2G21540,AT1G79050,AT2G39250,AT1G17430,AT2G22420,AT2G46820,AT2G40570,AT2G04400,AT5G44630,AT3G52920,AT4G09590,AT1G23470,AT5G45850,AT4G13540,AT1G77690,AT1G47960,AT2G32300,AT1G01120,AT1G32070,AT1G24560,AT4G17220,AT3G15115,AT5G26340,AT1G15350,AT3G14060,AT5G55860,AT1G56510,AT3G26520,AT5G67140,AT1G56250,AT2G42400,AT5G05460,AT4G35780,AT5G26930,AT4G18210,AT3G18330,AT2G45660,AT1G18020,AT3G47980,AT5G01250,AT3G10020,AT4G39090,AT1G47980,AT3G19900,AT1G60060,AT4G14010,AT1G73480,AT2G46330,AT1G72870,AT1G21310,AT3G57840,AT3G13980,AT4G17080,AT1G29370,AT1G69480,AT1G23130,AT3G32980,AT5G60020,AT2G37240,AT5G05450,AT1G72290,AT1G47310,AT3G55610,AT4G27470,AT5G45820,AT1G13260,AT1G23220,AT4G31910,AT4G33070,AT1G74650,AT1G53035,AT2G38540,AT3G48810,AT3G57170,AT3G24740,AT3G21240,AT2G02080,AT5G40370,AT3G03890,AT5G23600,AT4G22890,AT1G10910,AT3G51400,AT3G25570,AT3G09440,AT5G03960,AT2G16530,AT3G19553,AT5G52870,AT5G41240,AT5G44440,AT3G04530,AT1G52230,AT2G02570,AT4G29100,AT2G37040,AT1G63760,AT1G10460,AT1G01280,AT1G11910,AT4G37070,AT1G78440,AT3G04030,AT5G53660,AT4G34530,AT2G33740,AT1G30230,AT4G00355,AT5G60660,AT3G56820,AT4G11300,AT4G32290,AT3G49020,AT1G33350,AT3G15580,AT1G63690,AT5G30480,AT2G25890,AT1G66580,AT2G36410,AT3G48390,AT1G30530,AT4G19670,AT3G26720,AT5G46860,AT1G02610,AT5G58120,AT5G60740,AT2G02370,AT5G64530,AT4G28470,AT1G66970,AT1G13430,AT4G38800,AT4G00840,AT2G02680,AT2G29340,AT5G01530,AT3G60690,AT4G08950,AT1G44575,AT1G78490,AT5G40060,AT5G57620,AT1G75350,AT3G26440,AT5G25980,AT5G57670,AT3G28500,AT4G09580,AT1G43670,AT4G20260,AT1G28080,AT5G39080,AT2G30930,AT5G27350,AT5G06320,AT5G66160,AT1G80280,AT1G13640,AT2G37950,AT4G29030,AT1G22990,AT5G42560,AT2G35680,AT1G29660,AT2G46130,AT5G41260,AT1G43560,AT3G60700,AT1G51950,AT4G12480,AT4G32460,AT2G31470,AT4G03570,AT3G60120,AT1G44770,AT5G57660,AT3G50500,AT3G44840,AT4G13570,AT5G55850,AT5G07440,AT4G28280,AT1G68230,AT4G30370,AT1G52880,AT1G74790,AT2G15810,AT1G67940,AT2G18050,AT4G33150,AT3G06500,AT4G21210,AT3G49790,AT3G10040,AT4G30170,AT1G70690,AT4G38810,AT5G48670,AT2G38390,AT1G68510,AT2G04410,AT3G21330,AT5G12390,AT3G19550,AT4G16190,AT3G01110,AT5G22500,AT3G01400,AT1G72600,AT2G39100,AT5G40170,AT4G20250,AT1G01390,AT5G35170,AT3G05157,AT4G22250,AT2G18550,AT5G66030,AT1G72150,AT1G10210,AT1G26670,AT5G60850,AT3G46000,AT1G76760,AT5G23230,AT1G64670,AT1G80530,AT4G09830,AT4G02470,AT5G02480,AT1G52190,AT4G17730,AT2G25000,AT1G74360,AT1G04310,AT3G04060,AT4G33510,AT3G06170,AT1G69530,AT5G51150,AT5G05690,AT4G03520,AT1G58602,AT1G62480,AT3G06880,AT1G19670,AT3G46490,AT2G44580,AT1G13590,AT1G55810,AT5G58810,AT4G22810,AT1G70300,AT2G35090,AT3G29180,AT2G02750,AT5G04750,AT1G14030,AT2G23790,AT5G11720,AT3G44480,AT5G66040,AT3G16850,AT4G32780,AT5G63190,AT2G39800,AT1G61190,AT1G07648,AT1G58032,AT4G07530,AT5G57685,AT5G48480,AT1G75180,AT3G59250,AT1G58340,AT3G27770,AT1G78970,AT5G56810,AT2G17350,AT3G10250,AT1G51680,AT1G06070,AT1G04780,AT1G04300,AT1G79480,AT5G01350,AT1G57980,AT4G32450,AT5G21940,AT1G21780,AT3G11760,AT5G51520,AT4G12690,AT5G47720,AT2G04690,AT5G57480,AT2G23300,AT5G59960,AT2G01480,AT3G18035,AT4G27240,AT4G05110,AT2G31945,AT3G26300,AT5G12890,AT1G33590,AT3G01520,AT1G07600,AT1G60610,AT2G46550,AT2G37150,AT5G48160,AT4G39540,AT1G14400,AT2G46310,AT1G29280,AT3G02291,AT5G04470,AT3G26890,AT4G24630,AT5G58390,AT5G44250,AT4G30330,AT5G17010,AT5G42410,AT4G14950,AT3G22190,AT5G27210,AT5G35200,AT4G05350,AT1G31250,AT4G33740,AT2G16900,AT1G51115,AT4G24590,AT5G36090,AT5G65480,AT1G23720,AT1G18470,AT1G69500,AT3G42970,AT3G04730,AT3G28050,AT1G59950,AT1G42470,AT1G53165,AT5G27190,AT2G42890,AT1G77450,AT1G15800,AT4G34770,AT4G21780,AT3G55770,AT4G40080,AT1G07655,AT4G16690,AT4G21350,AT5G56330,AT1G62540,AT2G47860,AT1G03380,AT3G26830,AT4G21980,AT5G66052,AT1G24440,AT4G38970,AT5G07460,AT3G60030,AT5G03150,AT5G54710,AT4G26060,AT2G25260,AT5G55410,AT3G63210,AT5G27320,AT1G01180,AT1G76990,AT2G24460,AT3G30180,AT4G28025,AT1G73120,AT5G20630,AT1G65230,AT1G67030,AT1G01240,AT3G59690,AT2G26240,AT4G34680,AT4G14620,AT2G23070,AT4G01330,AT1G04400,AT4G34030,AT5G02940,AT2G05510,AT3G53420,AT2G26650,AT1G78720,AT1G17860,AT3G52060,AT3G12310,AT1G74410,AT5G17990,AT1G76460,AT5G05190,AT4G36930,AT2G23320,AT4G33750,AT1G15670,AT4G16515,AT3G49210,AT1G60140,AT1G48620,AT1G70840,AT5G02580,AT5G62260,AT3G21580,AT5G06590,AT3G32400,AT5G35120,AT1G10020,AT4G24720,AT1G33970,AT1G05830,AT1G36980,AT4G17340,AT5G48720,AT1G03310,AT2G31280,AT2G35820,AT5G42870,AT3G18780,AT5G57510,AT3G13450,AT3G52490,AT5G63760,AT1G32140,AT4G19950,AT3G55800,AT1G03230,AT3G23880,AT2G47000,AT5G12440,AT5G09660,AT4G01290,AT2G30490,AT5G61590,AT1G78840,AT5G62900,AT3G13460,AT2G38800,AT2G20570,AT2G02560,AT1G22110,AT1G51840,AT3G48320,AT1G54560,AT3G30390,AT2G26390,AT5G20250,AT1G03090,AT5G56140,AT5G44580,AT1G32170,AT3G50330,AT5G23450,AT1G48260,AT5G05110,AT1G17230,AT3G23930,AT4G14260,AT5G24060,AT3G55230,AT5G30545,AT3G54680,AT1G13960,AT1G26420,AT3G51840,AT2G21655,AT4G28750,AT2G03390,AT3G14210,AT5G17330,AT3G22750,AT5G10610,AT4G32860,AT2G20920,AT2G13770,AT1G75830,AT3G02110,AT1G60010,AT3G52250,AT4G31250,AT5G42750,AT4G32480,AT3G59060,AT3G01500,AT5G52830,AT3G28520,AT1G31580,AT3G63140,AT1G05570,AT2G31350,AT4G24230,AT3G56310,AT5G42800,AT5G53450,AT3G29030,AT4G31240,AT2G14090,AT4G29380,AT3G60200,AT1G76930,AT5G60100,AT5G49665,AT4G22710,AT5G40690,AT1G12440,AT3G61000,AT3G03470,AT4G24100,AT4G22520,AT4G16520,AT4G40060,AT5G17290,AT1G77120,AT5G26000,AT3G02550,AT1G54100,AT3G21260,AT4G35720,AT5G13655,AT1G56720,AT1G51850,AT5G29060,AT2G03730,AT2G26840,AT5G07360,AT4G32150,AT4G36670,AT1G33840,AT2G02710,AT2G17220,AT1G17950,AT3G27050,AT3G52480,AT4G38470,AT4G19160,AT3G54640,AT3G58940,AT5G36860,AT2G15890,AT1G14780,AT1G07610,AT4G35480,AT1G30700,AT2G42840,AT5G32560,AT2G16060,AT3G55560,AT4G02280,AT5G17550,AT5G63180,AT4G24040,AT4G28031,AT1G69140,AT3G61780,AT4G23830,AT2G37880,AT5G54190,AT1G79380,AT5G20620,AT3G20250,AT2G45510,AT5G09220,AT5G23510,AT5G22890,AT2G18700,AT5G49710,AT1G11260,AT2G18280,AT4G37330,AT3G23560,AT3G43230,AT1G78000,AT5G35030,AT1G51200,AT1G17810,AT4G32940,AT5G14180,AT1G27150,AT5G54730,AT3G19190,AT4G37870,AT3G51900,AT4G37890,AT2G39820,AT5G47450,AT3G15990,AT2G33790,AT5G49360,AT5G37170,AT4G21170,AT2G45370,AT5G08030,AT2G28670,AT3G01770,AT1G54680,AT1G52030,AT1G80450,AT2G45620,AT3G05990,AT1G37130,AT4G04980,AT4G23690,AT3G02800,AT3G10580,AT1G05840,AT5G59880,AT3G16640,AT5G05750,AT5G25160,AT4G14460,AT3G58910,AT1G32230,AT5G14190,AT1G33050,AT1G14920,AT2G28160,AT1G74840,AT5G67190,AT3G01690,AT3G03870,AT4G30190,AT3G54370,AT3G15450,AT4G13030,AT3G28930,AT3G27270,AT3G48360,AT1G18920,AT1G10480,AT1G44800,AT4G00050,AT5G22460,AT4G26530,AT5G49700,AT4G18740,AT1G29400,AT1G28327,AT4G23070,AT3G06850,AT5G46250,AT1G47760,AT4G19700,AT4G05150,AT3G61430,AT4G36880,AT5G02090,AT1G14890,AT2G30770,AT1G15740,AT4G30270,AT1G54780,AT4G36700,AT5G54530,AT5G61730,AT1G72070,AT5G42530,AT4G38860,AT1G67480,AT5G28450,AT5G34862,AT1G08660,AT3G53240,AT5G46050,AT4G12570,AT4G28080,AT3G49300,AT4G15650,AT1G32700,AT1G54910,AT1G17700,AT5G14120,AT1G62770,AT1G72830,AT1G42300,AT2G34730,AT5G11210,AT2G19970,AT1G08830,AT2G39210,AT5G46510,AT2G25080,AT1G04380,AT2G01340,AT1G80440,AT1G61460,AT1G06360,AT5G24730,AT5G22530,AT4G08300,AT4G17740,AT1G21360,AT1G21970,AT1G50420,AT1G46768,AT4G14360,AT3G07870,AT3G42060,AT1G36700,AT1G72200,AT1G80110,AT4G24180,AT5G24530,AT5G35690,AT1G01725,AT2G32960,AT2G13930,AT5G43370,AT5G44310,AT3G14800,AT1G41790,AT2G44380,AT5G03230,AT1G26990,AT1G19400,AT4G23560,AT4G15490,AT1G13110,AT5G49480,AT1G31100,AT1G59870,AT1G49130,AT5G07010,AT3G53480,AT2G28890,AT4G01600,AT1G02340,AT5G04720,AT4G38390,AT1G23870,AT1G59720,AT2G45170,AT5G23730,AT1G31290,AT3G45730,AT5G57330,AT5G53110,AT1G30750,AT1G61590,AT4G28460,AT1G41700,AT3G50950,AT3G43560,AT1G67810,AT4G30960,AT1G78290,AT5G12340,AT5G64590,AT1G48390,AT2G37750,AT4G37790,AT5G61250,AT3G48020,AT1G51420,AT4G36060,AT5G14920,AT3G12700,AT5G16110,AT1G56220,AT1G77210,AT3G42520,AT1G23120,AT1G05010,AT2G40330,AT3G47250,AT4G40070,AT3G42140,AT5G32430,AT4G12550,AT4G05130,AT5G55010,AT2G41100,AT5G10450,AT2G29600,AT4G13470,AT3G46270,AT4G31550,AT3G10985,AT1G18270,AT4G25090,AT5G34990,AT2G17710,AT4G27850,AT5G28670,AT5G47580,AT2G45420,AT5G67430,AT5G18080,AT5G20230,AT4G28240,AT2G32240,AT2G33270,AT3G43280,AT4G19840,AT2G45210,AT5G13750,AT3G17540,AT5G43220,AT1G12520,AT5G02020,AT3G18740,AT3G54940,AT1G47910,AT3G13710,AT1G73260,AT1G18860,AT2G05580,AT3G24503,AT5G51160,AT5G57655,AT4G16370,AT3G56060,AT4G14660,AT5G43540,AT1G61230,AT4G10020,AT2G38830,AT4G38060,AT5G16880,AT1G80330,AT5G11370,AT3G18290,AT1G07170,AT1G80380,AT2G44370,AT1G67150,AT5G01880,AT3G50170,AT5G41090,AT1G19540,AT4G25210,AT4G02240,AT1G51440,AT2G28110,AT5G38850,AT1G52130,AT1G61820,AT3G01290,AT5G46040,AT1G72940,AT2G47050,AT1G56010,AT4G05070,AT4G20110,AT1G64740,AT1G68100,AT1G28330,AT2G43610,AT3G15510,AT4G15610,AT5G67060,AT3G11930,AT5G36790,AT1G19410,AT5G14380,AT5G42010,AT1G69900,AT5G05250,AT1G71200,AT5G16370,AT1G33430,AT5G20650,AT3G06990,AT4G19390,AT1G01640,AT1G51170,AT5G39670,AT2G14510,AT5G46090,AT5G21020,AT1G13520,AT2G36320,AT3G43760,AT5G33360,AT4G16260,AT2G14870,AT4G16150,AT1G44160,AT2G27660,AT2G26320,AT5G57220,AT1G21270,AT3G48530,AT4G16920,AT1G16260,AT5G20740,AT3G28910,AT5G47560,AT3G51160,AT1G26790,AT4G11650,AT3G24540,AT5G45470,AT4G25170,AT5G59090,AT3G57380,AT3G46900,AT2G44790,AT3G61700,AT1G31920,AT2G42560,AT4G34300,AT5G24230,AT5G43580,AT5G64750,AT1G13245,AT2G35280,AT5G55170,AT3G07600,AT2G30400,AT5G65210,AT1G01140,AT1G17840,AT2G43830,AT5G07080,AT5G40590,AT1G01580,AT3G02620,AT2G33830,AT1G51790,AT5G39610,AT5G24270,AT2G28690,AT1G02530,AT1G43700,AT2G21910,AT4G28040,AT2G20870,AT4G23880,AT1G30720,AT4G10420,AT1G51620,AT3G22800,AT5G48410,AT1G02200,AT5G08380,AT1G33055,AT1G73800,AT1G63750,AT2G21020,AT2G19110,AT5G49450,AT5G13320,AT5G34835,AT5G45490,AT1G24140,AT5G23060,AT5G29075,AT1G15045,AT4G04700,AT1G66600,AT5G38200,AT2G45180,AT1G02580,AT1G29670,AT1G01560,AT1G62415,AT1G54870,AT1G13480,AT1G64660,AT1G27060,AT5G63020,AT1G65840,AT5G19890,AT1G62290,AT1G66200,AT2G39400,AT5G54620,AT5G14780,AT1G80830,AT4G38540,AT5G45500,AT5G39190,AT1G67110,AT5G47670,AT3G61390,AT3G23800,AT4G29550,AT2G28570,AT5G43770,AT3G27660,AT5G65980,AT5G43210,AT2G29330,AT1G08630,AT4G27260,AT1G13600,AT5G24090,AT3G43990,AT4G09610,AT4G08380,AT3G11340,AT1G26970,AT1G35647,AT1G05080,AT3G05690,AT1G32350,AT3G15910,AT5G09280,AT2G31980,AT1G21680,AT1G01400,AT1G49030,AT5G07770,AT1G28000,AT5G03860,AT4G08030,AT5G60760,AT3G01230,AT4G33050,AT5G02650,AT1G53620,AT3G26800,AT1G52200,AT4G37530,AT5G61010,AT2G47910,AT4G02520,AT1G41750,AT4G33020,AT5G59700,AT3G56400,AT1G49160,AT1G42650,AT5G58260,AT3G23190,AT2G28970,AT4G26740,AT1G68880,AT5G22830,AT1G32060,AT1G32450,AT4G27300,AT1G25420,AT5G43550,AT4G10500,AT1G09460,AT1G14280,AT5G12990,AT4G15270,AT5G06980,AT1G71140,AT2G36970,AT1G11925,AT4G31970,AT5G27070,AT5G51550,AT4G25110,AT5G42830,AT1G27230,AT3G14680,AT2G15960,AT1G37000,AT2G38400,AT3G63380,AT1G66140,AT2G43050,AT1G69560,AT1G62310,AT1G03210,AT5G65040,AT5G40780,AT3G53140,AT1G17240,AT5G39580,AT1G62460,AT1G03880,AT2G39380,AT4G38420,AT1G60260,AT5G52810,AT1G55790,AT4G13950,AT3G46610,AT1G20620,AT1G01980,AT2G43570,AT2G15010,AT5G35020,AT4G09110,AT5G03060,AT3G54040,AT4G27450,AT5G43290,AT5G22800,AT4G14630,AT5G43780,AT5G55020,AT5G50700,AT2G32690,AT5G59780,AT1G07120,AT3G13610,AT3G59480,AT1G03890,AT5G57240,AT5G05420,AT1G69490,AT4G12290,AT2G28960,AT5G36230,AT5G04370,AT1G12780,AT2G38290,AT1G05060,AT3G24300,AT2G17820,AT5G45070,AT5G42150,AT1G36640,AT4G10510,AT2G22860,AT1G60110,AT5G55890,AT2G35300,AT3G23130,AT1G09050,AT1G79130,AT2G43820,AT1G68250,AT3G47480,AT1G28100,AT1G67980,AT2G23270,AT1G74460,AT1G34180,AT5G63160,AT5G35660,AT2G47160,AT3G53160,AT4G01430,AT4G19690,AT2G05520,AT4G38770,AT1G31880,AT3G48740,AT1G27170,AT5G49780,AT5G38940,AT5G24640,AT5G07350,AT3G16770,AT3G46130,AT5G40450,AT1G03790,AT1G08050,AT3G07720,AT3G19410,AT2G01360,AT5G11920,AT3G22640,AT5G11360,AT3G44170,AT4G31380,AT1G18970,AT4G13310,AT3G22120,AT5G48430,AT5G43520,AT5G25870,AT1G09920,AT5G59080,AT3G04290,AT4G17660,AT1G21400,AT2G18300,AT1G10070,AT5G15120,AT2G04370,AT5G59680,AT4G04220,AT3G29340,AT4G27150,AT2G43590,AT5G24210,AT1G10920,AT4G26290,AT2G26560,AT5G23660,AT3G26510,AT3G44300,AT2G24260,AT1G30760,AT3G03670,AT3G10450,AT1G62380,AT1G70220,AT3G43660,AT1G15380,AT1G36480,AT2G26400,AT1G78160,AT5G38100,AT1G76410,AT4G31370,AT2G25370,AT1G63560,AT5G38810,AT4G24510,AT1G34050,AT5G52720,AT3G60420,AT1G25250,AT2G21140,AT2G23170,AT1G30770,AT1G55780,AT4G10850,AT3G44630,AT4G37390,AT5G56100,AT5G10140,AT4G35190,AT5G14670,AT1G68530,AT5G45180,AT3G46190,AT5G07490,AT3G60140,AT2G28780,AT2G28490,AT1G61120,AT4G12470,AT4G07820,AT3G56350,AT2G05540,AT1G29100,AT4G09900,AT4G30140,AT2G38530,AT1G70830,AT3G21720,AT1G19530,AT5G14740,AT4G18965,AT1G70260,AT5G44120,AT4G28520,AT1G65670,AT1G09310,AT2G25900,AT5G54740 CHANG_AZA-DC_UP Aza-dC upregulated (TableS1 PubmedID:15516340) AT3G18250,AT1G32940,AT4G22470,AT2G48120,AT1G61810,AT1G05680,AT2G29290,AT1G60730,AT4G09750,AT1G67750,AT1G26410,AT5G44380,AT5G13170,AT5G38530,AT5G06860,AT4G18210,AT4G28520,AT1G25275,AT5G17380,AT4G23550,AT1G23800,AT3G48890,AT3G54640,AT1G67980,AT5G44120,AT2G03760,AT2G46750,AT2G02390,AT2G43820,AT1G03220,AT5G20960,AT3G06800,AT4G01870,AT3G44320,AT3G27060,AT4G36220,AT1G65970,AT2G45570,AT2G26560,AT1G09560,AT4G37370,AT5G07440,AT3G14210,AT5G19440,AT3G14060,AT1G74020,AT1G04290,AT5G48540,AT5G61820,AT3G54330,AT1G62300,AT2G38860,AT3G26440,AT2G31570,AT2G29490,AT3G58740,AT5G12930,AT5G13740,AT5G53450,AT1G75830,AT4G14630,AT3G18830,AT5G13330,AT5G17650,AT5G43280,AT3G19660,AT4G12470,AT1G54010,AT3G54500,AT5G26340,AT4G03320,AT4G18930,AT3G24170 CHANG_AZA-DC_DN Aza-dC downregulated (TableS1 PubmedID:15516340) AT5G03540,AT4G29780,AT2G17840,AT3G23430,AT4G11320,AT1G30870,AT1G61890,AT1G70850,AT3G63160,AT1G05250,AT5G11070,AT2G40000,AT3G44260,AT5G48000,AT1G30360,AT1G20450,AT3G12710,AT2G48140,AT5G15970,AT3G22231,AT5G17820,AT5G52310,AT3G15210,AT5G15960,AT5G41080,AT5G01220,AT4G40090,AT4G27280,AT4G18280,AT4G14060,AT1G11960,AT5G42380,AT3G62550,AT1G27730,AT3G62040,AT5G65280,AT1G32640,AT3G01190,AT3G47070,AT5G20630,AT4G22610,AT5G61600,AT1G28330,AT1G78020,AT2G40140,AT4G25100,AT3G01500,AT5G23240,AT3G62680,AT5G43370,AT1G68840,AT1G29670 CHANG_TSA_UP TSA upregulated (TableS1 PubmedID:15516340) AT3G47340,AT2G47580,AT2G05540 CHANG_TSA_DN TSA downregulated (TableS1 PubmedID:15516340) AT4G34410,AT2G34600,AT4G29780,AT1G35140,AT3G48520,AT2G27690,AT1G61890,AT5G62520,AT1G66160,AT5G13930,AT5G56980,AT5G26030,AT2G06050,AT4G15210,AT3G16860,AT4G10340,AT3G26980,AT4G23180,AT4G17490,AT4G27652,AT3G19240,AT1G73080,AT1G17380,AT5G19470,AT1G19180,AT5G42380,AT2G17840,AT2G39650,AT1G55450,AT4G34150,AT4G29670,AT5G66210,AT3G44750,AT3G52400 CHANG_AZA-DC+TSA_UP Aza-dC+TSA upregulated (TableS1 PubmedID:15516340) AT2G18700,AT3G06850,AT1G19530,AT4G27260,AT2G47190,AT2G26560,AT5G49450,AT2G28110,AT3G30775,AT1G73260,AT5G56100,AT2G38400,AT5G56870,AT1G10070,AT1G06560,AT5G64190,AT2G05540,AT3G57520,AT4G22470,AT4G13250,AT4G33150,AT4G36040,AT3G45300,AT5G54080,AT2G30600,AT3G62790,AT5G47590,AT5G49360,AT3G54500,AT4G15610,AT5G57655,AT5G48160,AT1G23120,AT4G32570,AT1G54100,AT3G51730,AT1G80160,AT4G34030,AT1G55810,AT1G58025,AT3G61060,AT1G64660,AT5G54300,AT1G05340,AT2G26790,AT4G28040,AT1G65970,AT3G45730,AT3G09350,AT4G22920,AT4G35770,AT1G62300,AT3G30390,AT3G61890,AT5G58650,AT2G20670,AT5G20230,AT5G57910,AT5G20250,AT4G23550,AT1G04290,AT2G39710,AT1G69700,AT5G13330,AT3G29035,AT5G66400,AT5G07440,AT4G01030,AT2G45300,AT1G02340,AT2G14170,AT5G40780,AT5G02810,AT5G04040 CHANG_AZA-DC+TSA_DN Aza-dC+TSA downregulated (TableS1 PubmedID:15516340) AT5G26260,AT3G01500,AT5G24770,AT5G48000,AT1G09310,AT4G36360,AT4G12550,AT2G38540,AT5G53980,AT1G28400,AT4G11320,AT1G28290,AT1G37130,AT2G29980,AT1G48600,AT1G55360,AT2G15820,AT5G65640,AT3G16400,AT1G42970,AT4G16620,AT3G16370,AT1G09640,AT5G20630,AT3G18080,AT1G75500,AT3G23050,AT1G49980,AT3G55800,AT1G70850,AT1G21310,AT5G48300,AT5G09530,AT3G63160,AT4G37930,AT1G04800,AT2G30070,AT3G28860,AT1G35720,AT1G29670,AT2G40610,AT5G28150,AT2G22125,AT4G27900,AT2G43150,AT3G26060,AT3G46780,AT3G12780,AT5G51820,AT2G22670,AT5G48100,AT1G73330,AT3G51895,AT2G45470,AT5G19470,AT4G18030,AT3G63140,AT4G01150,AT3G19710,AT5G23060,AT3G22231,AT1G04820,AT2G38380,AT3G62040,AT3G12710,AT1G54010,AT1G72610,AT1G29660,AT3G49220,AT3G16470,AT1G33290,AT5G23820,AT3G08030,AT3G09820,AT1G75680,AT2G47240,AT1G01430,AT5G17520,AT1G19350,AT1G53310,AT1G20010,AT3G12120,AT4G32460,AT3G19820,AT3G15950,AT1G19670,AT1G28440,AT1G71695,AT1G08500,AT4G29510,AT3G19340,AT5G43700,AT4G39800,AT4G14960,AT1G49750,AT2G42570,AT5G12140,AT4G38080,AT1G69870,AT3G01190,AT5G62890,AT1G15280,AT4G01450,AT3G46970,AT5G28500,AT1G68560,AT3G54050,AT5G57180,AT3G09210,AT3G24503,AT1G50010,AT1G45332,AT2G40770,AT3G47070,AT1G17190,AT5G43750,AT1G32060,AT1G29150,AT4G33070,AT4G13840,AT1G67870,AT5G66190,AT4G23820,AT1G10670,AT5G44020,AT4G22610,AT5G01830,AT3G47860,AT5G56630,AT2G27680,AT5G48560,AT1G02850,AT3G10340,AT1G30360,AT5G02230,AT1G12000,AT1G53240,AT3G06150,AT5G25460,AT3G25920,AT2G33800,AT4G10060,AT5G24780,AT1G19120,AT5G23010,AT5G07580,AT2G05920,AT5G16030,AT5G25890,AT1G19570,AT3G15095,AT5G38980,AT5G14420,AT2G39010,AT1G68590,AT1G65960,AT1G67340 JURGEN_CAT2_LATE_STEM_UP Cat 1 (late up) in stem expression cluster (Arabidopsis) (TableS4 PubmedID:15918878) AT1G14510 JURGEN_CAT2_EARLY_STEM_DN Cat 2 (early down) in stem expression cluster (Arabidopsis) (TableS4 PubmedID:15918878) AT5G08750,AT1G77200,AT5G07040,AT3G06380,AT1G30330,AT5G37020,AT2G25180,AT4G32800,AT3G61950,AT2G42380,AT3G45310,AT2G01430,AT2G03710,AT5G62165,AT5G11510,AT5G54230,AT1G65910,AT4G17980,AT5G50570,AT2G31070,AT4G33970,AT4G13620,AT4G30980,AT1G66560 JURGEN_CAT3_EARLY_STEM_DN Cat 3 (early down) in stem expression cluster (Arabidopsis) (TableS4 PubmedID:15918878) AT5G09750,AT5G51990,AT5G06960,AT4G36590,AT3G19020 JURGEN_CAT4_EARLY_STEM_UP Cat 4 (early up) in stem expression cluster (Arabidopsis) (TableS4 PubmedID:15918878) AT1G79180,AT5G16600,AT5G07580,AT5G24800,AT5G42200,AT1G62990,AT4G34990,AT1G43700,AT1G13300,AT2G46680,AT1G05805,AT1G78080,AT3G15210,AT1G77920,AT1G21450,AT5G65210,AT2G23340,AT1G67030,AT5G66070,AT1G18470,AT4G16190,AT5G45710,AT5G18830,AT1G53170,AT4G16780,AT2G26150,AT4G26580,AT1G04370,AT1G71520,AT5G60830,AT1G72010,AT5G59780,AT4G32010,AT3G61970,AT3G14230,AT3G16280,AT3G23240,AT5G61590,AT5G60450,AT4G16110,AT2G18300,AT2G28160,AT1G68640,AT2G40620,AT3G19290,AT4G02640,AT2G25990,AT1G27730,AT3G13810,AT5G57520,AT1G26800,AT1G74410,AT3G02340,AT5G38895,AT5G47640,AT1G68670,AT3G46640,AT4G28610,AT2G01570,AT1G55580,AT5G53660,AT2G22800,AT3G24520,AT1G67970,AT2G42830,AT3G58780,AT3G50060,AT1G25340,AT4G13480,AT5G47390,AT2G24430,AT2G33480,AT1G54060,AT1G29860,AT5G56270 JURGEN_CAT5_STEM_UP Cat 5 (linear up) in stem expression cluster (Arabidopsis) (TableS4 PubmedID:15918878) AT4G29100,AT1G29950,AT2G36080,AT3G19860,AT5G60850,AT5G47370,AT2G24260,AT4G05170,AT2G28350,AT5G57660,AT1G50600,AT4G36900,AT5G07100,AT4G40060,AT4G39780,AT4G14410,AT1G22070,AT5G10030,AT4G37180,AT3G01470,AT3G29035,AT3G50700,AT5G51910,AT2G40340,AT4G27950,AT2G46970,AT1G25440,AT1G28310,AT5G40310,AT4G10160,AT5G43250,AT1G60880,AT5G27090,AT5G39750,AT1G35515,AT4G01120,AT2G46830,AT3G47500,AT4G01250,AT5G49620,AT1G17950,AT1G13260,AT4G21550,AT3G42790,AT5G26210,AT4G36920,AT5G61600,AT3G57600,AT4G31060,AT5G65130,AT3G61830,AT5G62000,AT3G16857,AT1G69010,AT1G09530,AT1G02340,AT5G46760,AT1G03970,AT1G75390,AT5G06950,AT5G49450,AT1G68520,AT3G02380,AT4G15250,AT3G55370,AT5G65590,AT4G24470,AT1G10480,AT1G34370,AT1G66140,AT5G19430,AT1G11020,AT2G04240,AT3G19910,AT5G48655,AT1G17590,AT1G30500,AT2G34720,AT5G12840,AT3G12480,AT2G01060,AT2G20400,AT3G03450,AT3G50650,AT5G06710,AT2G22540,AT1G77080,AT3G18650,AT5G23260,AT1G68320,AT3G01530,AT5G06100,AT5G58850,AT1G19000,AT1G74840,AT3G10490,AT5G66300,AT3G60030,AT1G35560,AT1G13450,AT3G25990,AT2G47900,AT1G13960,AT1G66550,AT2G03340 JURGEN_CAT6_STEM_DN Cat 6 (linear down) in stem expression cluster (Arabidopsis) (TableS4 PubmedID:15918878) AT1G10120,AT3G58120,AT1G44830,AT3G48100,AT2G45050,AT4G22250,AT5G39820,AT2G24570,AT5G65310,AT2G44940,AT5G08330,AT4G11320,AT3G57800,AT4G30370,AT5G05830,AT5G08139,AT2G43910,AT2G35700,AT2G40220,AT5G07310,AT2G33860,AT2G01760,AT5G50010,AT3G62420,AT1G08000,AT4G00180,AT3G02830,AT2G41940,AT5G44160,AT4G18020,AT5G05090,AT2G06200,AT1G31640,AT3G02310,AT3G09370,AT3G27920,AT3G28910,AT3G53200,AT4G37780,AT5G07690,AT5G15310,AT2G18060,AT5G43270,AT2G33810,AT5G03680,AT1G49490,AT2G15880 JURGEN_CAT7_TRANSIENT_STEM_DN Cat 7 (transient down) in stem expression cluster (Arabidopsis) (TableS4 PubmedID:15918878) AT1G63100,AT2G36010,AT1G26310 JURGEN_CAT8_TRANSIENT_STEM_UP Cat 8 (transient up) in stem expression cluster (Arabidopsis) (TableS4 PubmedID:15918878) AT1G66230,AT5G24930,AT3G10500,AT4G23750,AT1G33760,AT3G12250,AT2G20570,AT4G35580,AT5G18270,AT5G22380 JURGEN_LED1_STELE_ROOT_UP LED 1 (up, stele only) in root tissue cluster (Arabidopsis) (TableS4 PubmedID:15918878) AT1G79180,AT5G16600,AT5G07580,AT5G24800,AT5G42200,AT1G62990,AT1G71692,AT2G28810,AT1G30490,AT4G02590,AT2G34710,AT1G52150,AT4G32880,AT1G61660,AT4G35350,AT4G28140,AT5G19790,AT1G68810,AT3G05800,AT3G06590,AT3G25710,AT3G49760,AT2G22850,AT4G24060,AT1G64620,AT2G46590,AT3G21270,AT3G61850,AT5G60200,AT3G43430,AT1G69580,AT4G36740,AT5G60690,AT5G12870,AT4G27410,AT1G71930,AT4G36160,AT5G13180,AT5G46590,AT3G47620,AT1G12040,AT1G76890,AT2G04880 JURGEN_LED3_STELE-ENDO-CORTEX_ROOT_UP LED 3 (up; stele, endo, cortex) in root tissue cluster (Arabidopsis) (TableS4 PubmedID:15918878) AT1G43700,AT1G13300,AT2G46680,AT2G47520,AT1G03040,AT4G21340,AT2G37950,AT4G28890,AT2G47810,AT4G36990,AT4G01680,AT2G36890,AT3G23250,AT4G05100,AT5G14340,AT5G16770,AT5G57620,AT4G32710 JURGEN_LED5_ROOT-CAP_ROOT_DN LED 5 (down; root cap only) in root tissue cluster (Arabidopsis) (TableS4 PubmedID:15918878) AT1G05805,AT1G22190,AT3G16770,AT4G18450,AT1G19850,AT4G30080,AT1G63650,AT1G66470,AT4G00480,AT2G36270,AT1G28050,AT5G16560,AT4G00730,AT5G10140,AT1G75250,AT1G26870,AT1G79580,AT3G15500,AT4G10350,AT5G15130 JURGEN_LED6_ROOT-CAP_ROOT_UP LED 6 (up; root cap only) in root tissue cluster (Arabidopsis) (TableS4 PubmedID:15918878) AT1G78080,AT3G15210,AT1G77920,AT1G21450,AT2G22430,AT2G47190,AT2G47890,AT5G47230,AT3G07340,AT3G21890,AT4G39070,AT1G51700,AT2G34140,AT3G52800,AT1G08930,AT2G32930,AT5G03510,AT5G01960,AT4G17230,AT4G18880,AT1G18570,AT1G68690,AT5G01380,AT2G38470,AT2G23320,AT1G30650,AT2G30250,AT1G29280,AT1G62300,AT1G69810,AT3G01970,AT5G24110 JURGEN_LED7_ALL-TISSUE_ROOT_UP LED 7 (up; all tissues) in root tissue cluster (Arabidopsis) (TableS4 PubmedID:15918878) AT5G65210,AT2G23340,AT1G67030,AT5G66070,AT1G18470,AT4G16190,AT5G45710,AT5G18830,AT1G09540,AT1G76900,AT1G15100,AT2G46270,AT1G43160,AT3G61630,AT4G25490,AT5G13330,AT5G25810,AT5G48560,AT1G27740,AT1G51140,AT5G57150,AT1G42990,AT3G54620,AT4G35040,AT5G62430,AT1G04990,AT1G24625,AT5G59820,AT4G13100,AT5G20910,AT5G59450,AT5G52510,AT4G32040,AT4G37790,AT1G57560,AT5G67300,AT2G16720,AT1G32870,AT1G01010,AT1G77450,AT3G04070,AT1G70460,AT2G18280,AT4G01720 JURGEN_LED7_ALL-TISSUE_ROOT_DN LED 8 (down; all tissues) in root tissue cluster (Arabidopsis) (TableS4 PubmedID:15918878) AT1G53170,AT4G16780,AT2G26150,AT1G06180,AT3G25890,AT1G68550,AT5G44210,AT5G53290,AT4G36930,AT5G65640,AT2G41070,AT3G16870,AT3G50870,AT4G36620,AT5G66320,AT5G39550,AT1G03840,AT1G55110,AT1G56170,AT5G42630,AT1G14920,AT3G52910,AT4G37740,AT1G46264,AT4G37940,AT1G69490,AT3G57150,AT1G52890,AT4G37490,AT3G14180,AT1G47270,AT1G16070,AT4G30930,AT4G27380 WILSON_SOME-MUTANTS-COMPARISON_DIFF Non-redundant genes found to be differentially expressed in more than one mutant comparison (Table2 PubmedID:15908439) AT1G04370,AT1G11260,AT1G19530,AT1G28330,AT1G52400,AT1G74920,AT1G75280,AT1G75830,AT1G80920,AT2G02990,AT2G14610,AT2G18193,AT2G18660,AT2G26010,AT2G33830,AT2G34655,AT2G37040,AT2G39740,AT2G43590,AT3G13080,AT3G13590,AT3G15450,AT3G32240,AT4G00620,AT4G07425,AT4G08870,AT4G12470,AT4G12480,AT4G15210,AT4G24000,AT4G25000,AT4G33720,AT4G34190,AT5G03545,AT5G10140,AT5G20150,AT5G24770,AT5G24780,AT5G44420 WILSON_FLOWERING-MUTANT/ISOGENIC-CONTROL_UP Positive expression of list of non-redundant genes that were differentially expressed comparing flowering mutants to their near isogenic controls (TableS2 PubmedID:15908439) AT1G02930,AT1G04370,AT1G08830,AT1G28135,AT1G52400,AT1G66340,AT1G69870,AT1G72930,AT1G75280,AT1G75750,AT1G75830,AT2G02990,AT2G14610,AT2G16590,AT2G17200,AT2G18193,AT2G18660,AT2G26010,AT2G34655,AT2G37040,AT2G41110,AT2G41230,AT2G43590,AT2G44300,AT3G04120,AT3G06860,AT3G08580,AT3G11480,AT3G13080,AT3G21720,AT3G30775,AT3G32240,AT3G45140,AT3G57260,AT4G08870,AT4G12470,AT4G12480,AT4G13940,AT4G15210,AT4G15440,AT4G24000,AT4G25000,AT4G25530,AT4G37870,AT5G06870,AT5G09660,AT5G10140,AT5G13420,AT5G16910,AT5G24770,AT5G24780,AT5G34970,AT5G42050,AT5G44420,AT5G50790,AT5G59320 WILSON_FLOWERING-MUTANT/ISOGENIC-CONTROL_DN Negative expression of list of non-redundant genes that were differentially expressed comparing flowering mutants to their near isogenic controls (TableS2 PubmedID:15908439) AT3G56490,AT1G28330,AT1G80920,AT3G15450,AT1G11650,AT1G32450,AT1G73330,AT2G15890,AT2G33790,AT3G16240,AT3G62410,AT4G02270,AT4G13470,AT4G26010,AT4G40090,AT5G19140,AT5G24490,AT5G40710,AT5G40730,AT5G44610,AT5G47450,AT5G53490,AT5G56870,AT5G57625,AT1G11260,AT1G15690,AT1G77990,AT2G39800,AT4G33010,AT5G13630,AT5G17920,AT1G74940,AT3G47070,AT4G25100,AT4G39675,AT5G01600,AT5G10040,AT5G51300,AT2G32150,AT5G14740,AT3G13590,AT1G19530,AT5G10140,AT1G04400,AT5G20150,AT2G28190,AT1G74920,AT2G43590,AT5G44420,AT5G03545,AT4G27440,AT2G39740,AT4G07425,AT2G33830,AT4G34190,AT1G75830,AT4G27450,AT1G56220,AT1G79040,AT2G05540,AT3G49580,AT4G08510,AT5G48850,AT5G66170,AT4G00620,AT2G26010,AT4G33720,AT1G35680,AT1G52400,AT3G11170,AT5G24770,AT5G24780,AT1G04370,AT2G32780 DELESSERT_35S-ATAF2-1C4NWP_UP Induced representative genes differentially expressed in 35S:atAF2-1C4NWP (Table1 PubmedID:16115070) AT4G34590,AT3G04070,AT1G02205,AT4G22530,AT5G67480,AT1G27030,AT2G26690,AT5G19440,AT3G44320,AT3G16240,AT3G62550,AT2G02100,AT5G02380,AT5G13370,AT3G05880 DELESSERT_35S-ATAF2-1C4NWP_DN Repressed representative genes differentially expressed in 35S:atAF2-1C4NWP (Table1 PubmedID:16115070) AT3G52380,AT5G58060,AT2G37710,AT4G12040,AT3G57260,AT1G75040,AT5G10760,AT3G56400,AT1G75830,AT5G44420,AT2G02930,AT2G18660,AT2G37040,AT2G14610,AT3G16530 DELESSERT_ATAF2-IN-SALK_015750/WT-COL-0_UP Induced- expressed in the atAF2 insertion line (SALK_015750) when compared to the wild-type Col-0. (TableS1 PubmedID:16115070) V00618,AT5G44420,AT1G75830,AT2G14610,AT2G27530,AT3G44190,AT3G47500,AT1G02930,AT5G48540 DELESSERT_C24WP_1C4NWP_UP Induced in C24WP and 1C4NWP (TableS2 PubmedID:16115070) AT4G22530,AT1G17745,AT4G34590,AT5G19440,AT3G04070,AT2G17500,AT3G05880,AT5G15880,AT1G02205,AT3G44320 DELESSERT_C24WP-UP_1C4NWP-DN Induced in C24WP and repressed in 1C4NWP (TableS2 PubmedID:16115070) AT4G12480,AT5G61820,AT5G58060,AT2G29420,AT5G48540,AT1G02930,AT4G13180,AT2G37040,AT3G41950,AT1G29690,AT4G07420,AT1G19020,AT3G28740,AT3G56400,AT5G45380,AT4G12470,AT5G25250,AT3G16530,AT2G37710,AT5G20230,AT2G38470 DELESSERT_C24WP_1C4NWP_DN Repressed in C24WP and repressed in 1C4NWP (TableS2 PubmedID:16115070) AT5G55460,AT1G75040,AT5G67300 DELESSERT_1C4NWP_UP Induced in 1C4NWP (TableS3 PubmedID:16115070) V00618,AT5G67480,AT1G27030,AT2G26690,AT4G06744,AT3G16240,AT3G62550,AT2G02100,AT5G02380,AT5G13370 DELESSERT_1C4NWP_DN Repressed in 1C4NWP (TableS3 PubmedID:16115070) AT3G22231,AT4G39950,AT5G26920,AT4G38550,AT3G04720,AT3G04717,AT5G24530,AT2G40750,AT1G23650,AT1G52400,AT2G16590,AT2G26560,AT1G23850,AT4G14400,AT2G38860,AT5G42530,AT2G47130,AT5G05750,AT3G52380,AT2G05520,AT4G12040,AT3G57260,AT3G16530,AT4G02520,AT5G10760,AT1G75830,AT5G44420,AT2G02930,AT2G27530,AT2G18660,AT2G14610 DELESSERT_1C4WP/C24WP_UP Induced in 1C4WPvsC24WP (TableS4 PubmedID:16115070) V00618,AT2G41230,AT2G04040,AT2G33800,AT5G02380,AT2G25080,AT5G01600,AT3G62550,AT3G12880,AT3G10520,AT4G37870,AT4G18670,AT2G47190,AT1G54410,AT1G27030 DELESSERT_1C4WP/C24WP_DN Repressed in 1C4WPvsC24WP (TableS4 PubmedID:16115070) AT2G35930,AT1G55450,AT5G63790,AT4G08470,AT5G35735,AT3G09940,AT5G42740,AT2G17220,AT3G25250,AT1G59870,AT1G17420,AT1G35720,AT5G05730,AT1G10070,AT5G19250,AT1G54100,AT1G52780,AT4G15440,AT2G41730,AT2G29430,AT4G08770,AT2G39210,AT1G02920,AT2G38470,AT1G32350,AT1G49050,AT2G29420,AT1G52400,AT2G47130,AT5G25610,AT4G02520,AT5G20230,AT1G76790,AT1G23850,AT1G11260,AT5G58060,AT5G52310,AT1G49760,AT1G02930,AT5G10760,AT5G26920,AT2G37710,AT3G50930,AT2G30770,AT2G40750,AT4G12040,AT2G05520,AT5G25250,AT5G45380,AT5G59310,AT1G21270,AT2G02930,AT3G52380,AT5G24530,AT5G05750,AT5G54610,AT1G75040,AT5G42530,AT2G37040,AT5G59320,AT4G14400,AT2G14610,AT3G57260,AT2G18660,AT3G56400 DELESSERT_C24WP_UP Induced in C24 WP (TableS5 PubmedID:16115070) AT2G38240,AT3G09440,AT5G16010,AT1G78380,AT5G55050,AT2G34810,AT5G52050,AT2G02990,AT4G01870,AT5G17000,AT2G16630,AT5G52310,AT4G20970,AT5G24780,AT5G56010,IW02a07,IW01e05,AT2G47730,IW01f12,AT4G34230,AT5G59310,AT2G43510,AT1G36580,AT5G56000,AT1G69870,AT4G20830,AT3G09350,AT4G34200,AT5G63790,AT2G36800,AT4G34710,AT1G05680,AT1G05560,AT4G24020,AT3G11340,AT5G15970,AT3G57390,AT5G20000,AT5G59320,AT3G02230,AT2G38250,AT4G15610,AT3G13520,AT3G18720,AT3G07390,AT4G21120,IW02G10,AT5G35735,AT5G24770,IW01f06,IW01G01,AT5G17380,AT4G29900,AT3G54420,AT5G65760,AT1G43160,IW01h01,AT4G22470,AT5G11740,AT5G47930,AT2G29410,AT5G02050,AT1G17170,AT4G37370,AT4G02030,m6kp73f11f1,IW01f10,AT5G26340,AT5G58070,AT5G20830,AT5G07010,AT1G74540,AT5G47120,AT1G74020,AT2G22500,AT4G28860,AT5G24030,AT4G34240,AT2G21620,AT5G42020,IW01G04,AT5G40710,AT3G28210,IW03f01,AT5G51070,AT5G15650,AT2G36630,AT3G13230,AT4G05130,AT1G23800,AT1G17180,AT1G09310,AT5G45950,AT1G56580,AT1G66580,W43885,AT3G23920,AT2G43120,m6kp10G12f1,AT4G23630,W43196,AT1G07920,IW01G05,AT5G51830,AT2G47190,AT5G01340,AT1G14360,AT4G24380,AT1G07140,AT5G61790,AT3G03990,AT5G03630,AT3G11480,AT2G29430,IW02a04,IW02e02,AT4G23060,AT5G59080,AT3G23820,AT2G24500,AT4G30530,AT4G37910,AT2G27310,AT3G22660,AT1G01470,AT1G19180,m6kp8a05f1,AT4G16760,AT3G46890,AT3G20860,IW01h12,AT3G18830,AT5G15750,AT4G25670,IW03e02,AT4G28840,IW02a06,AT1G01780,AT5G56030,AT1G02920,AT1G72900,AT2G29500,AT3G19580,AT3G21540,IW04d12,F15K20.6,AT3G13080,AT2G36310,AT1G09070,m6kp43b04f1,T76110,m6kp17f10f1,AT5G48930,AT4G24160,AT5G42050,AT3G22310,AT4G34480,AT1G68570,IW01f07,AT3G17810,AT5G10630,AT3G21720,AT1G21310,IW02h08,AT2G29450,AT5G02500,AT3G51600,AT4G34110,AT3G15810,AT5G64230,AT5G57280,AT2G27690,AT2G22470,AT1G37130,AT3G52470,AT1G56070,m6kp17f03f1,AT4G33540,W43449,AT3G08580,AT3G13790,AT5G24080,AT4G11590,AT3G13940,m6kp44G04f1,AT3G24170,AT5G54650,AT5G50200,AT3G57010,CA04b06,AT1G22840,AT5G08180,m6kp59a10f1,AT5G53590,T20627,AT5G14760,AT1G76520,IW01G03,AT3G27750,AT4G39670,AT1G77840,AT4G31860,AT4G13940,IW03f04,AT5G18400,AT2G41540,AT3G06860,AT5G52020,AT5G41800,AT2G23810,AT2G44350,AT2G37180,AT4G26910,AT3G51800,AT2G32240,AT5G46710,AT1G23090,AT2G25000,AT3G13150,IW05a06,AT5G16910,AT5G11240,AT5G11970,AT5G54970,AT3G55430,AT3G55360,AT4G17530,AT2G31750,AT2G44430,T21344,AT2G41470,AT4G11890,AT1G23290,AT4G15000,AT4G39850,AT5G51220,IW05a02,AT4G05320,AT5G24570,AT5G57510,AT5G09330,m6kp11d03f1,AT2G04570,AT1G20693,AT5G22060,AT1G30630,AT2G03760,AT4G16500,AT4G23470,AA042651,AT3G53870,AT5G50720,AT5G28830,AT2G46370,AA042459,AT1G10060,AT3G59630,AT1G06650,AT3G05360,AT1G72910,AT5G53450,AT5G09840,AT2G31880,AT4G27830,AT4G11600,AT5G14570,AT5G42150,T27K22.4,AT4G20860,IW02a09,AT3G14060,F20M17.1,AT4G22640,AT1G06640,IW02f09,AT3G46640,AT2G37110,AT1G80600,AT2G23120,AT1G49740,AT4G11980,AT1G07930,AT2G32120,AT5G04310,AT3G13310,AT2G41110,AT3G13910,AT4G30190,AT5G61570,CA08f10,CA08f11,AT3G53260,AT1G74260,CA04c04,AT4G36990,AT4G15450,AT1G54050,AT2G39210,AT2G30870,AT4G13580,AT5G10820,AT3G63210,AT5G54310,IW02G12,AT4G21570,AT5G66790,AT3G22200,AT4G05390,AT1G50420,AT2G38540,AT1G09780,CA04f11,AT2G32780,AT1G02200,AT5G22650,AT3G09840,N37257,AT5G56350,AT2G02860,AT2G28140,AT3G23990,AT4G22920,AT1G07350,AT2G34250,AT3G44340,AT2G38360,AT2G04160,AT1G13440,AT2G37700,AT4G05440,AT2G20630,AT5G09470,AT3G14680,AT1G48920,AT5G46430,AT5G04340,AT5G06320,AT5G60790,AT5G47730,AT4G39270,AT5G14700,AT5G59850,AT4G32460,AT5G03700,AT1G07600,T44314,AT1G50010,AT3G52930,AT2G18050,AT4G35260,AT5G52470,AT3G03050,m6kp69e07f1,AT5G09510,AT2G36580,AT3G10380,AT3G62870,AT3G13110,AT3G02470,AT3G09390,IW05f04,m6kpmixedd06f1,AT5G65660,CA04b10,AT5G20160,AT2G37040,AT3G48990,IW03a01,AT4G13440,AT5G67540,AT1G75350,IW02a03,AT1G17840,AT5G10410,AT3G21290,AT1G28350,AT3G18600,AT5G53330,CA04b05,IW01f09,IW04f05,AT1G27730,AT2G01640,AT5G41520,AT1G77140,AT1G59740,AT2G28500,AT4G29040,AT2G36410,AT5G40580,AT1G55920,AT2G41100,AT3G14650,AT2G21390,IW02f10,AT3G22845,AT4G20840,AT2G46450,AT5G09270,AT1G31817,N96202,AT4G21840,AT3G22600,AT5G17920,AT2G26530,AT1G52890,AT5G42380,AT3G62600,CA04G01,AT4G19220,AT5G27700,AT3G07050,AT4G22970,AT1G62870 DELESSERT_C24WP_DN Repressed in C24 WP (TableS5 PubmedID:16115070) AT5G62280,AT5G64380,AT1G44446,AT4G32480,AT3G13690,AT2G17230,AT3G14930,AT2G01110,AT1G29910,AT2G15880,AT3G57050,AT4G37300,AT5G15230,AT5G67250,AT3G14420,AT3G47470,AT5G01600,AT1G70490,AT3G61110,AT1G25530,AT5G21430,AT1G67590,AT3G03320,AT4G09050,AT1G03675,T9J22.3,AT3G14100,AT2G33830,AT5G57340,IW03G01,AT2G36420,m6kpmixedc08f1,AT5G55660,AT1G18710,AT2G39800,AT3G04110,CA05h09,AT1G79850,CA04G05,AT5G11610,AT2G38270,AT5G15580,AT5G16000,AT1G80920,AT4G02510,AT1G63220,AT4G16780,AT4G35470,AT1G22630,IW02b11,AT2G07000,W43577,AT5G26820,IW05c07,AT4G37560,AT2G34430,AT5G06290,AT2G40170,AT2G19310,AT3G18290,AT1G78370,AT5G24930,AT5G48470,AT2G47450,AT3G16130,AT1G57750,AT1G50360,T43943,m6kp51h12f1,AT5G36220,N96743,IW05G11,AT3G56950,AT4G01050,AT3G63140,AT5G38520,AT3G47620,m6kp50a10f1,AT3G63410,m6kp16f01f1,AT3G26680,AT2G47400,AT2G36390,AT2G42870,AT5G25630,AT5G64040,IW05f08,AT5G62840,T76618,AT5G18970,IW01c07,AT1G18730,AT1G12090,AT4G16980,IW04b11,AT5G20630,CA04b03,AT4G27450,AT3G13120,AT3G45780,AT5G13730,AT3G56940,IW01b04,AT3G51950,AT4G28240,AT5G19140,AT3G25920,AT3G54050,AT3G17000,AT4G15545,AT3G61830,AT1G64640,CA05G08,AT2G04240,IW01h05,AT1G18620,AT5G18100,AT5G05690,IW01h11,AT1G26270,AT4G25570,AT3G22640,AT1G14140,CA07f12,AT3G22960,AT4G38690,AT5G49360,AT3G61260,AT1G15740,AT5G01590,AT4G32260,IW04e05,AT4G16830,AT5G52190,AT1G22640,AT1G16170,AT1G68590,AT1G72790,CA04a05,AT1G54780,AT2G18890,AT3G63490,T42661,IW02h05,AT3G44260,AT5G48120,AT1G72450,AT5G45070,AT5G08100,AT1G68720,AT3G08940,AT4G21650,AT2G28060,AT5G63160,AT5G37830,AT5G51390,AT2G06520,AT3G01690,AT2G40100,AT5G54190,AT5G46860,AT3G60480,AT1G06460,AT5G58500,F22D22.16,AT1G04970,AT3G07590,IW02d09,AT4G29190,AT3G29330,AT2G36400,AT2G37480,AT1G73880,CA05G10,AT1G25275,AT4G12730,CA05h07,AT5G39210,AT5G01020,m6kpmixede03f1,AT5G22210,CA05f12,AA042746,AT3G58470,AT1G14150,AT2G32870,AT4G21280,AT3G10940,m6kp21a03f1,AT3G07350,IW03G04,AT2G15890,AT5G61590,AT5G43700,196D3T7,AT3G62660,m6kp50f12f1,AT4G21790,IW03a05,AT1G74910,AT5G13510,N96596,AT5G50450,AT2G35800,AT4G16410,AT5G44900,CA05G04,AT2G22540,AT4G10340,AT5G11550,IW05c04,AT2G22910,AT1G48650,AT5G13710,CA04b08,IW03b06,AT3G30845,AT5G53500,m6kp11h06f1,AT2G46220,AT4G30020,AT3G47070,AT4G26555,AT1G20560,AT2G15830,AT2G41200,AT5G43750,AT4G23820,AT2G30600,AT3G61470,AT4G24800,AT5G53490,AT1G11260,AT5G12440,AT1G75800,m6kp4G10f1,AT5G20060,AT5G22390,AT3G55800,AT3G15450,AT1G07320,AT3G09860,AT1G72740,AT4G00780,AT4G34190,AT3G15560,AT5G44260,AT5G45150,AT4G36850,T5M7.11,AT1G50290,CA05e05,AT3G54980,AT3G60810,AT1G15110,AT1G11860,AT1G61520,AT3G46780,AT4G19530,AT5G13140,AT5G13630,AT1G17200,AT3G21055,T43686,AA042634,AT3G16400,AT2G41940,AT2G38120,AT2G46710,AT5G15780,AT2G32150,AT4G39920,AT3G61580,AT1G11650,AT2G31810,AT1G74880,AT5G06690,AT5G23010,AT3G27690,CA05G06,AT5G57930,AT5G63780,CA05G05,m6kp8d10f1,AT1G03130,AT3G12710,AT1G04240,AT5G26605,CA05f07,m6kp50e09f1,AT1G64990,AT1G60000,AT1G15820,m6kp59a03f1,AT5G21020,AT5G02590,AT3G03150,CA04e06,CA04a10,IW04d05,AT2G42040,AT5G64770,AT2G17120,AT1G12080,AT5G18170,AT1G78270,AT1G74470,AT5G03230,AT2G32090,AT2G34620,AT5G10180,CA04G09,AT3G54890,AT1G64720,IW04b12,AT1G32060,AT5G02160,AT1G51400,AT2G33810,AT5G22920,m6kp38e05f1,AT5G16030,AT5G66590,AT3G06030,AT5G50730,AT4G27440,AT5G54270,AT1G54100,AT3G62410,AT3G62840,AT5G24490,AT1G28330,AT3G63160,AT3G43110,AT2G45180,AT5G14920,AT1G70890,AT4G19170,IW05b12,IW05b09,CA04b09,AT5G22940,AT2G20670,AT4G21960,AT2G06850,AT5G32450,IW05f05,AT4G35160,AT5G48490,AT3G55130 BONARDI_PHOTOSYNTHETIC_STN7-DEPENDENT_STN8-MUTANT_DIFF Differential expression Photosynthetic genes with STN7-dependent in the stn8 mutant. (TableS3 PubmedID:16237446) AT1G29920,AT1G29910,AT2G34430,AT2G34420,AT2G05100,AT2G05070,AT3G08940,AT5G54270,AT4G10340,AT1G15820,psaA,AT4G02770,AT1G03130,AT4G28750,AT2G20260,AT1G55670,AT3G16140,AT1G52230,AT1G06680,AT2G30790,AT3G50820,AT1G79040,AT3G21055,AT5G23120,AT4G37200,AT1G76100,AT1G20340,AT4G17600,AT3G22840,AT3G61470,AT4G15510,AT1G76450,rbcL LU_INFLORESCENCE/SEEDLING_1_UP Upregulated-tissue specific small RNA by Inflorescence/Seedling_1 (File 2 PubmedID:16141074) AT5G22860,AT3G42160,AT3G42550,AT4G34690,AT1G77100,AT4G03740,AT5G28450,AT2G28056,AT4G21370,AT3G28490,AT3G09510,AT2G40440,AT3G61470,AT1G20400,AT2G15470,AT2G42340,AT2G15450,AT4G21366,AT5G07210,AT1G11370,AT4G10890,AT2G07734,AT2G41830,AT2G05060,AT4G20620,AT2G19410,AT1G69940,AT1G66570,AT4G16765,AT5G38450,AT3G57720,AT1G11590,AT3G28680,AT4G08874,AT3G18820,AT2G15340,AT1G31163,AT5G40870,AT2G04060,AT1G25180,AT1G25112,AT1G25025,AT2G41920,AT1G24851,AT3G06435,AT3G27190,AT5G28910,AT5G15420,AT3G45910,AT2G34290,AT2G38220,AT5G28810,AT1G70650,AT4G18000,AT1G34490,AT4G15096,AT2G40955,AT1G35180,AT5G35338,AT4G26350,AT5G22960,AT4G21380,AT3G29785,AT2G02380,AT5G42635,AT1G60730,AT5G06670,AT4G22420,AT3G60310,AT3G60300,AT1G80590,AT1G18010,AT1G18000,AT2G14870,AT1G44085,AT1G35710,AT5G42420,AT4G08093,AT3G17400,AT1G19890,AT3G32280,AT5G62660,AT3G06350,AT2G13450,AT1G47875,AT5G46370,AT1G65960,AT5G24360,AT5G18990,AT4G04490,AT3G51860,AT3G27990,AT2G16490,AT2G13980,AT2G13150,AT1G54990,AT1G54640,AT1G48280,AT5G54700,AT1G38630,AT3G29080,AT5G27870,AT2G15460,AT5G39620,AT5G25200,AT5G23380,AT3G23310,AT2G13900,AT2G13720,AT1G70210,AT1G54580,AT1G53500,AT1G37000,AT5G18636,AT1G43320,AT5G50480,AT4G04730,AT4G22770,AT5G13200,AT3G61320,AT3G59730,AT1G21940,AT5G39230,AT4G15396,AT3G49430,AT3G27980,AT2G29810,AT1G53640,AT3G50400,AT5G48560,AT1G31740,AT2G16020,AT5G35300,AT1G35614,AT1G11270,AT5G35920,AT3G51430,AT4G36460,AT2G02835,AT1G60720,AT5G28720,AT3G47675,AT1G43100,AT1G59835,AT5G41500,AT4G37840,AT4G12330,AT4G04500,AT3G49070,AT3G45140,AT2G44550,AT2G18930,AT1G59930,AT2G45380,AT5G06170,AT5G19200,AT4G30710,AT1G24490,AT5G45920,AT3G29110,AT2G32150,AT2G05100,AT5G28010,AT1G69800,AT2G31215,AT4G02075,AT3G30520,AT3G25727,AT1G35820,AT5G64440,AT5G48860,AT5G39470,AT5G39110,AT2G11015,AT1G43640,AT1G33450,AT1G08770,AT5G03400,AT1G32010,AT4G39955,AT1G21930,AT5G58660,AT5G17550,AT3G28560,AT1G32220,AT2G05752,AT1G67130,AT5G29624,AT5G24220,AT4G05250,AT2G10965,AT2G16030,AT4G24960,AT1G49190,AT3G43420,AT4G26730,AT1G32180,AT3G42060,AT2G02080,AT2G01990,AT3G26100,AT5G41765,AT5G36820,AT5G36730,AT1G50050,AT5G64790,AT5G60950,AT5G57580,AT5G39100,AT5G35610,AT5G35470,AT5G28150,AT5G06800,AT5G02980,AT4G37630,AT4G08990,AT3G31900,AT3G28810,AT3G11300,AT3G02540,AT2G39630,AT2G37810,AT2G33780,AT2G10550,AT1G72900,AT1G50350,AT1G33850,AT5G02330,AT4G08560,AT5G57740,AT2G06555,AT5G02340,AT1G58025,AT4G24720,AT3G10340,AT2G07120,AT5G47970,AT2G07760,AT1G51840,AT4G11370,AT2G47020,AT5G28550,AT5G10330,AT4G04650,AT2G04845,AT2G04070,AT1G43090,AT1G43080,AT1G15670,AT1G29960,AT1G14580,AT4G11700,AT3G46380,AT3G16530,AT1G52970,AT1G60095,AT5G36900,AT3G18340,AT2G24870,AT2G18610,AT1G80070,AT1G47370,AT5G42430,AT3G21870,AT5G24900,AT5G05130,AT4G09660,AT4G09270,AT4G09220,AT4G02000,AT2G16587,AT1G28000,AT1G23670,AT3G26870,AT2G06904,AT5G54820,AT1G58480,AT1G01650,AT4G26870,AT5G50710,AT5G50610,AT5G09970,AT4G04510,AT5G53200,AT5G50290,AT4G16215,AT5G32590,AT3G47350,AT2G19850,AT2G13410,AT5G48190,AT5G44640,AT5G41990,AT5G41610,AT5G37160,AT5G37020,AT5G35830,AT5G35730,AT5G28295,AT5G18830,AT5G03090,AT4G23410,AT4G18150,AT4G09740,AT4G09700,AT4G00416,AT3G58610,AT3G47470,AT3G46860,AT3G43970,AT3G43550,AT3G43500,AT3G32160,AT2G46460,AT2G45780,AT2G27320,AT2G24780,AT2G22890,AT2G20320,AT2G18660,AT2G14670,AT2G10970,AT1G75980,AT1G72150,AT1G66580,AT1G58602,AT1G53480,AT1G19090,AT1G18250,AT1G04140,AT2G04675,AT4G14540,AT1G33860,AT4G13885,AT3G27680,AT1G47783,AT1G36180,AT3G32180,AT2G04870,AT4G02910,AT1G36100,AT5G27140,AT4G20710,AT3G30350,AT3G01345,AT2G12280,AT1G16630,AT2G07777,AT5G38550,AT4G34070,AT4G03060,AT2G38185,AT2G25260,AT2G39680,AT5G51090,AT3G20160,AT1G10400,AT1G73177,AT3G20030,AT4G14500,AT4G14140,AT1G35500,AT2G39440,AT2G34655,AT4G19270,AT3G45170,AT1G62670,AT5G55010,AT3G43150,AT2G02550,AT1G09245,AT1G31290,AT1G31280,AT5G24450,AT5G28660,AT5G26290,AT5G24480,AT1G42980,AT1G23050,AT3G29763,AT2G45160,AT1G33010,AT3G54730,AT5G38280,AT4G05360,AT5G23660,AT1G51320,AT3G60630,AT4G12545,AT4G16230,AT1G32290,AT3G49020,AT1G03010,AT3G46460,AT1G38790,AT1G35420,AT5G20480,AT5G35290,AT4G00150,AT5G51100,AT5G44990,AT5G28020,AT4G29200,AT4G13470,AT3G32904,AT2G46810,AT2G34790,AT1G69650,AT1G44542,AT1G62920,AT4G33300,AT2G13430,AT5G54720,AT4G20920,AT3G50810,AT2G07698,AT2G25470,AT1G27870,AT5G24990,AT2G20950,AT4G04030,AT3G57230,AT5G50820,AT1G34410,AT3G28870,AT1G49680,AT1G34310,AT4G40100,AT1G77970,AT1G29920,AT5G66040,AT3G44610,AT1G48050,AT2G01540,AT5G57730,AT2G22190,AT4G02180,AT3G13662,AT2G21100,AT1G36675,AT5G22500,AT1G35240,AT2G13630,AT3G45460,AT3G25855,AT2G08986,AT5G62110,AT5G47030,AT5G46660,AT5G44870,AT5G36280,AT5G35737,AT5G32613,AT5G28920,AT5G27730,AT5G24670,AT5G23840,AT5G14580,AT5G05100,AT4G32990,AT4G13760,AT4G11450,AT4G05523,AT4G05130,AT4G03823,AT3G48690,AT3G47860,AT3G45770,AT3G45480,AT3G42680,AT3G25720,AT3G16970,AT3G14670,AT2G44140,AT2G32140,AT2G28600,AT2G27350,AT2G18500,AT2G10608,AT2G03840,AT2G01900,AT2G01430,AT1G63150,AT1G62590,AT1G55120,AT1G51055,AT1G34430,AT1G34390,AT1G34315,AT1G30760,AT1G03060,AT2G44580 LU_INFLORESCENCE/SEEDLING_1_DN Downregulated-tissue specific small RNA by Inflorescence/Seedling_1 (File 2 PubmedID:16141074) AT3G47170,AT1G26240,AT3G43160,AT1G43950,AT2G07981,AT1G35520,AT4G07965,AT3G45490,AT4G20095,AT1G54040,AT5G38190,AT5G20850,AT4G21590,AT2G06210,AT4G00120,AT2G01950,AT4G03930,AT3G44310,AT1G72930,AT5G38920,AT2G02850,AT1G47480,AT2G23250,AT1G35430,AT1G47765,AT1G48260,AT5G09710,AT4G28950,AT3G05725,AT1G44000,AT4G11900,AT4G11890,AT4G26320,AT1G45150,AT2G10920,AT1G42470,AT1G07025,AT3G48840,AT5G43020,AT1G35540,AT4G36030,AT4G05140,AT3G27470,AT1G78480,AT5G43610,AT5G27340,AT4G35390,AT5G07410,AT5G56530,AT5G50150,AT4G24770,AT2G44220,AT1G10750,AT3G42850,AT5G67120,AT5G24440,AT5G08185,AT2G24570,AT3G63430,AT3G07380,AT2G40310,AT2G10090,AT5G15660,AT1G43330,AT2G03250,AT1G05010,AT4G28920,AT4G01400,AT5G52080,AT3G17185,AT5G44270,AT4G09360,AT3G45560,AT1G49700,AT2G41380,AT2G02250,AT5G36220,AT5G49260,AT2G14846,AT3G28956,AT1G16670,AT4G28570,AT5G14550,AT5G58960,AT5G55565,AT5G29070,AT5G11700,AT4G34890,AT4G31710,AT4G24020,AT4G03950,AT4G01525,AT3G53750,AT3G47130,AT3G07160,AT2G46190,AT2G37620,AT2G28640,AT2G25590,AT2G07671,AT1G63330,AT5G27330,AT2G25780,AT2G17880,AT1G07980,AT3G63370,AT5G61430,AT5G07680,AT2G05350,AT1G52180,AT1G43760,AT4G21000,AT2G18480,AT5G55250,AT1G32000,AT4G34900,AT1G03150,AT5G66310,AT1G12820,AT4G08870,AT5G44050,AT2G14100,AT3G26740,AT5G22180,AT5G30490,AT4G18110,AT3G26810,AT5G34883,AT4G28870,AT5G01210,AT2G17470,AT2G13350,AT2G03980,AT1G66490,AT1G62910,AT4G18990,AT1G44980,AT4G04745,AT2G26800,AT3G46390,AT1G23130,AT3G62980,AT1G24090,AT3G20950,AT1G04630,AT5G56970,AT5G45310,AT5G46780,AT3G25650,AT1G29910,AT5G39830,AT5G07970,AT5G04810,AT3G60990,AT3G43290,AT2G26130,AT2G17305,AT2G11623,AT2G11620,AT1G79590,AT1G76910,AT1G69620,AT1G66790,AT1G62890,AT1G56080,AT1G52905,AT1G49100,AT1G26880,AT1G07920,AT1G07260,AT4G02420,AT4G23730,AT1G51420,AT5G24655,AT1G63130,AT1G63320,AT2G15320,AT5G50140,AT2G12935,AT2G35250,AT2G34420,AT3G23380,AT2G28605,AT3G59570,AT1G62540,AT5G53410,AT5G57100,AT1G56415,AT1G28270,AT5G36140,AT3G55930,AT1G63070,AT1G53680,AT1G63400,AT3G32330,AT3G13275,AT1G03200,AT1G18060,AT2G17420,AT1G69050,AT1G26410,AT5G61470,AT4G20170,AT4G05631,AT2G22710,AT2G05830,AT1G62930,AT1G12300,AT3G23690,AT5G48000,AT4G08670,AT1G76710,AT1G12770,AT1G48510,AT5G62165,AT5G52090,AT3G50250,AT4G39180,AT2G30010,AT4G01900,AT5G18430,AT2G10930,AT1G55540,AT2G05540,AT1G67000,AT1G47625,AT5G27150,AT5G42955,AT5G42957,AT5G07570,AT5G61130,AT1G78340,AT5G25970,AT1G03240,AT3G44235,AT5G64010,AT5G41505,AT5G28950,AT5G21125,AT5G20700,AT4G00390,AT3G32090,AT3G26520,AT3G23970,AT2G29170,AT2G07280,AT2G06845,AT2G06090,AT2G04090,AT1G78630,AT1G74230,AT1G44960,AT1G43722,AT1G12620,AT5G43270,AT1G63080,AT3G56210,AT3G44230,AT2G27540,AT4G01010,AT2G11005,AT1G64580,AT3G59180,AT2G25370,AT1G55280,AT5G11190,AT1G14530,AT5G54760,AT5G34887,AT4G01980,AT1G78850,AT3G02610,AT5G26890,AT5G35604,AT5G18065,AT5G18040,AT1G56070,AT1G51910,AT5G39690,AT3G26330,AT5G26970,AT3G50480,AT5G34885,AT2G28900,AT1G54540,AT1G62860,AT3G30770,AT2G21770,AT1G35143,AT1G35030,AT5G49780,AT5G42260,AT5G33251,AT5G23120,AT5G16640,AT4G09775,AT4G08593,AT3G28950,AT3G18770,AT2G46770,AT2G37170,AT2G23830,AT1G76190,AT1G62720,AT1G60960,AT1G34910,AT1G14620,AT1G05135,AT1G04790,AT2G05140,AT1G32710,AT5G34881,AT2G44540,AT3G46620,AT5G11620,AT4G09070,AT5G15790,AT4G05080,AT2G36710,AT5G34905,AT1G03420,AT5G65610,AT2G34110,AT2G31140,AT2G07785,AT5G24510,AT4G02870,AT1G03230,AT2G14160,AT4G02970,AT4G15970,AT2G16100,AT1G36340,AT4G12770,AT1G72940,AT1G72920,AT5G37170,AT5G15210,AT4G39080,AT4G09500,AT3G26140,AT2G38210,AT1G72830,AT1G54160,AT1G54150,AT1G22710,AT1G11655,AT3G20820,AT4G34730,AT1G63420,AT5G65630,AT5G33370,AT4G05095,AT3G19160,AT1G17590,AT2G28350,AT5G36720,AT4G16640,AT4G10340,AT3G43490,AT3G33494,AT2G26040,AT1G48410,AT2G31590,AT3G26220,AT4G15240,AT1G53430,AT4G02630,AT3G02130,AT1G32350,AT1G16060,AT1G77815,AT4G29710,AT4G09950,AT3G14067,AT5G40900,AT5G35160,AT2G13100,AT1G29930,AT5G09730,AT2G06645,AT1G23320,AT5G54360,AT2G23530,AT2G17150,AT2G27110,AT4G11770,AT1G36150,AT1G09815,AT1G03340,AT2G24340,AT4G31080,AT2G01650,AT5G38850,AT4G10610,AT3G50320,AT4G18670,AT4G31877,AT3G50300,AT4G21640,AT4G30080,AT5G67380,AT5G67350,AT5G66570,AT5G65580,AT5G65010,AT5G65000,AT5G64120,AT5G64100,AT5G64040,AT5G64000,AT5G63070,AT5G62890,AT5G62000,AT5G61730,AT5G61540,AT5G61070,AT5G60440,AT5G60390,AT5G59930,AT5G59880,AT5G59613,AT5G58520,AT5G58410,AT5G57700,AT5G57020,AT5G56460,AT5G56100,AT5G55310,AT5G55070,AT5G55000,AT5G54960,AT5G54900,AT5G54600,AT5G54280,AT5G54270,AT5G53970,AT5G53550,AT5G53500,AT5G53110,AT5G52470,AT5G52400,AT5G51670,AT5G51195,AT5G51060,AT5G50670,AT5G50570,AT5G50450,AT5G49910,AT5G49215,AT5G48940,AT5G48360,AT5G48280,AT5G47770,AT5G47390,AT5G47250,AT5G47240,AT5G47110,AT5G47020,AT5G46915,AT5G46910,AT5G46490,AT5G44590,AT5G44160,AT5G44090,AT5G44030,AT5G43350,AT5G43330,AT5G42730,AT5G42720,AT5G42110,AT5G41000,AT5G39290,AT5G38630,AT5G38430,AT5G38410,AT5G38390,AT5G38386,AT5G38080,AT5G38020,AT5G37750,AT5G37500,AT5G37280,AT5G37010,AT5G36210,AT5G35735,AT5G35695,AT5G35630,AT5G31412,AT5G30510,AT5G28820,AT5G28500,AT5G28463,AT5G28030,AT5G27640,AT5G27580,AT5G27490,AT5G27060,AT5G26320,AT5G25880,AT5G25780,AT5G25757,AT5G25754,AT5G25590,AT5G25460,AT5G25240,AT5G25120,AT5G25110,AT5G24660,AT5G24620,AT5G23830,AT5G23280,AT5G23110,AT5G21100,AT5G20630,AT5G19820,AT5G19610,AT5G19170,AT5G19150,AT5G18860,AT5G18520,AT5G18260,AT5G17920,AT5G16760,AT5G16610,AT5G16110,AT5G15560,AT5G15150,AT5G14880,AT5G14330,AT5G14170,AT5G14120,AT5G13840,AT5G13830,AT5G13810,AT5G13060,AT5G12860,AT5G11670,AT5G10890,AT5G10470,AT5G10280,AT5G09900,AT5G09540,AT5G08130,AT5G07530,AT5G07000,AT5G06790,AT5G06570,AT5G06360,AT5G05670,AT5G05590,AT5G05580,AT5G05490,AT5G05360,AT5G04930,AT5G04590,AT5G04045,AT5G03650,AT5G02500,AT5G02490,AT5G02440,AT5G01630,AT5G01530,AT5G01075,AT4G39980,AT4G39760,AT4G39190,AT4G39090,AT4G38750,AT4G38740,AT4G38730,AT4G38710,AT4G38190,AT4G38050,AT4G38000,AT4G37640,AT4G36590,AT4G36360,AT4G36140,AT4G36000,AT4G35950,AT4G35770,AT4G35490,AT4G35300,AT4G35100,AT4G34710,AT4G34670,AT4G33010,AT4G32800,AT4G32290,AT4G32020,AT4G31980,AT4G30970,AT4G30960,AT4G29010,AT4G28700,AT4G27520,AT4G26910,AT4G26830,AT4G24820,AT4G24810,AT4G24780,AT4G24530,AT4G23420,AT4G22970,AT4G22960,AT4G22930,AT4G22570,AT4G22530,AT4G22520,AT4G22470,AT4G22110,AT4G21310,AT4G21300,AT4G21190,AT4G21180,AT4G20860,AT4G20370,AT4G20300,AT4G20260,AT4G19010,AT4G18900,AT4G18730,AT4G17570,AT4G17340,AT4G16980,AT4G16295,AT4G16260,AT4G16100,AT4G15545,AT4G15490,AT4G15470,AT4G15460,AT4G15380,AT4G15070,AT4G15000,AT4G14040,AT4G13940,AT4G13930,AT4G13570,AT4G13510,AT4G13340,AT4G13310,AT4G12140,AT4G12110,AT4G11830,AT4G11610,AT4G10840,AT4G10590,AT4G10570,AT4G10430,AT4G10030,AT4G09780,AT4G08895,AT4G08370,AT4G08190,AT4G07380,AT4G06536,AT4G05490,AT4G05320,AT4G05040,AT4G04925,AT4G04870,AT4G04860,AT4G03280,AT4G03156,AT4G02770,AT4G02500,AT4G02080,AT4G01995,AT4G00970,AT4G00570,AT4G00370,AT4G00360,AT4G00240,AT4G00060,AT3G63500,AT3G63410,AT3G63380,AT3G62250,AT3G61810,AT3G61370,AT3G60970,AT3G60750,AT3G60730,AT3G60160,AT3G59950,AT3G59940,AT3G59450,AT3G59360,AT3G58870,AT3G58210,AT3G57680,AT3G57580,AT3G57430,AT3G57140,AT3G56490,AT3G56310,AT3G56275,AT3G56200,AT3G55850,AT3G55740,AT3G55440,AT3G55360,AT3G55260,AT3G55210,AT3G54950,AT3G54400,AT3G53640,AT3G53480,AT3G53460,AT3G53180,AT3G52930,AT3G52500,AT3G52240,AT3G52160,AT3G51895,AT3G51780,AT3G51600,AT3G51450,AT3G51440,AT3G50870,AT3G50820,AT3G50710,AT3G50590,AT3G49790,AT3G49670,AT3G49340,AT3G49100,AT3G48950,AT3G48780,AT3G47760,AT3G47400,AT3G46970,AT3G46260,AT3G46240,AT3G45750,AT3G45500,AT3G45390,AT3G45230,AT3G45030,AT3G44910,AT3G44900,AT3G44530,AT3G44430,AT3G44050,AT3G43170,AT3G42150,AT3G32930,AT3G29638,AT3G29630,AT3G28900,AT3G28590,AT3G27690,AT3G27390,AT3G27160,AT3G26720,AT3G25520,AT3G25470,AT3G24420,AT3G24315,AT3G23920,AT3G22890,AT3G22660,AT3G22650,AT3G22380,AT3G22190,AT3G22120,AT3G21760,AT3G21465,AT3G20490,AT3G20000,AT3G19180,AT3G19140,AT3G19070,AT3G18980,AT3G18780,AT3G18540,AT3G18520,AT3G16460,AT3G15740,AT3G15730,AT3G15605,AT3G14860,AT3G14050,AT3G14020,AT3G13120,AT3G13070,AT3G12780,AT3G12775,AT3G12740,AT3G12700,AT3G12590,AT3G12580,AT3G12145,AT3G10650,AT3G10380,AT3G10350,AT3G10300,AT3G10240,AT3G10050,AT3G10020,AT3G09840,AT3G09390,AT3G08780,AT3G08720,AT3G08580,AT3G07100,AT3G06760,AT3G06050,AT3G05410,AT3G04930,AT3G04570,AT3G04210,AT3G04120,AT3G03990,AT3G03780,AT3G03300,AT3G03260,AT3G03050,AT3G02570,AT3G02170,AT3G01560,AT3G01120,AT2G47120,AT2G45540,AT2G45530,AT2G45220,AT2G44680,AT2G44240,AT2G44130,AT2G44050,AT2G43470,AT2G43070,AT2G42600,AT2G42590,AT2G42460,AT2G42350,AT2G41720,AT2G41220,AT2G41100,AT2G40490,AT2G39730,AT2G38240,AT2G38230,AT2G37700,AT2G37640,AT2G37380,AT2G36800,AT2G36790,AT2G36770,AT2G36320,AT2G35720,AT2G34940,AT2G34430,AT2G34230,AT2G33770,AT2G32120,AT2G31890,AT2G31880,AT2G31400,AT2G30760,AT2G28670,AT2G28410,AT2G28340,AT2G28160,AT2G27880,AT2G27700,AT2G27230,AT2G27100,AT2G27020,AT2G26120,AT2G25840,AT2G25600,AT2G25490,AT2G25100,AT2G24990,AT2G24650,AT2G24130,AT2G23920,AT2G23810,AT2G23670,AT2G23380,AT2G23300,AT2G23230,AT2G23140,AT2G22680,AT2G21610,AT2G21430,AT2G21330,AT2G20805,AT2G19450,AT2G18620,AT2G18160,AT2G17750,AT2G17590,AT2G16880,AT2G16660,AT2G16430,AT2G15430,AT2G15050,AT2G15010,AT2G14890,AT2G14810,AT2G14740,AT2G14720,AT2G14500,AT2G12905,AT2G10940,AT2G07750,AT2G07360,AT2G07190,AT2G05900,AT2G05520,AT2G05290,AT2G05220,AT2G05070,AT2G04390,AT2G04280,AT2G04270,AT2G04230,AT2G04025,AT2G03240,AT2G03070,AT2G01730,AT2G01590,AT1G80740,AT1G80660,AT1G79510,AT1G79150,AT1G78420,AT1G78130,AT1G77940,AT1G77790,AT1G77760,AT1G77380,AT1G76825,AT1G76810,AT1G76720,AT1G76460,AT1G76100,AT1G75950,AT1G75750,AT1G75540,AT1G74440,AT1G74430,AT1G74320,AT1G73460,AT1G73450,AT1G72970,AT1G72910,AT1G72610,AT1G72430,AT1G72160,AT1G71880,AT1G71130,AT1G70910,AT1G70780,AT1G70030,AT1G69450,AT1G69080,AT1G68540,AT1G68460,AT1G68440,AT1G68390,AT1G67930,AT1G67590,AT1G67390,AT1G67090,AT1G66900,AT1G66890,AT1G66660,AT1G66650,AT1G66600,AT1G66560,AT1G66530,AT1G66150,AT1G65780,AT1G64840,AT1G64500,AT1G64380,AT1G63340,AT1G63030,AT1G62750,AT1G62740,AT1G61520,AT1G59870,AT1G59218,AT1G58420,AT1G58310,AT1G56650,AT1G56540,AT1G56520,AT1G56510,AT1G56450,AT1G56270,AT1G55890,AT1G55670,AT1G55660,AT1G55360,AT1G54930,AT1G54780,AT1G54630,AT1G53930,AT1G53920,AT1G53230,AT1G53210,AT1G52070,AT1G51470,AT1G51260,AT1G51200,AT1G51130,AT1G49975,AT1G49770,AT1G49340,AT1G49030,AT1G48920,AT1G48310,AT1G48300,AT1G47790,AT1G47560,AT1G47450,AT1G47240,AT1G47230,AT1G44750,AT1G43730,AT1G43680,AT1G43190,AT1G42700,AT1G36980,AT1G36580,AT1G36320,AT1G35860,AT1G35850,AT1G35513,AT1G34650,AT1G34290,AT1G34280,AT1G34050,AT1G33700,AT1G33680,AT1G33660,AT1G33590,AT1G31885,AT1G31810,AT1G31450,AT1G31330,AT1G31320,AT1G30210,AT1G30020,AT1G30010,AT1G29940,AT1G29730,AT1G29410,AT1G28290,AT1G28170,AT1G27520,AT1G27210,AT1G26150,AT1G24560,AT1G24440,AT1G24100,AT1G23690,AT1G23310,AT1G23030,AT1G22440,AT1G22430,AT1G22000,AT1G21430,AT1G21065,AT1G21060,AT1G20840,AT1G20440,AT1G20380,AT1G20340,AT1G20300,AT1G19950,AT1G19660,AT1G19170,AT1G18210,AT1G17550,AT1G16300,AT1G16070,AT1G15820,AT1G15290,AT1G14400,AT1G14020,AT1G13360,AT1G13350,AT1G13320,AT1G13230,AT1G13130,AT1G13030,AT1G12810,AT1G12760,AT1G12110,AT1G12030,AT1G11860,AT1G11630,AT1G11480,AT1G10220,AT1G10140,AT1G09730,AT1G09070,AT1G08800,AT1G08710,AT1G08480,AT1G08380,AT1G07940,AT1G07930,AT1G07890,AT1G07780,AT1G07500,AT1G07250,AT1G06650,AT1G06640,AT1G06580,AT1G06070,AT1G06000,AT1G05615,AT1G05570,AT1G05560,AT1G05420,AT1G05220,AT1G05210,AT1G05120,AT1G04780,AT1G04420,AT1G04330,AT1G04310,AT1G04250,AT1G04170,AT1G04150,AT1G01920,AT1G01720 ZIMMERLI_SAM_HOST/UNTREATED-8HPI_UP Upregulated genes for clones selected by SAM analysis-Host/Untreated-8 hpi (TableS3 PubmedID:15546348) AT3G28940,AT3G45640,AT5G42050,AT4G36990,AT1G78100,AT5G54810,AT5G13030,AT3G04720,AT3G17710,AT4G14400,AT5G06320,AT5G44420,AT1G75830,AT3G22440,AT2G22690,AT1G72910,AT5G61790,AT1G15670,AT1G80040,AT1G27350,AT2G33120,AT1G45145,AT1G25390 ZIMMERLI_SAM_HOST/UNTREATED-8HPI_DN Downregulated genes for clones selected by SAM analysis-Host/Untreated-8 hpi (TableS3 PubmedID:15546348) AT5G21090,AT2G25260,AT3G46970,AT3G44890,AT3G51730,AT4G08950,AT4G16630,AT2G26080,AT1G68010,AT1G19120,AT4G12420,AT5G01820,AT4G33960,AT5G64310,AT1G32330,AT4G31500,AT1G58100,AT4G09650,AT5G23060,AT5G62350,AT5G48790,AT5G19940,AT1G31330,AT1G49740,AT3G16240,AT5G65720,AT4G05180,AT2G33800,AT5G65950,AT1G09340,AT4G17340,AT3G01500,AT5G28540,AT1G04820,AT1G61770,ATCG01300,AT1G20010,AT3G57820,AT1G69295,AT1G05850,AT2G37220,AT4G29060,AT2G17120,AT5G61410,AT1G20340,AT5G47110,AT3G47650,AT4G29510,AT2G25080,AT1G43670,AT2G06520,AT2G40490,AT5G28840,AT5G14970,AT1G74970,AT1G67870,AT2G05070,AT3G54500,AT2G38120,AT2G28900,AT2G36240,AT4G39330,AT3G54050,AT1G60950,AT5G28750,AT1G80380,AT5G42100,AT1G54780,AT2G29630,AT3G52180,AT5G15530,AT3G26060,AT1G58290,AT4G29905,AT5G05740,AT1G77510,AT4G16620 ZIMMERLI_SAM_HOST/UNTREATED-18HPI_UP Upregulated genes for clones selected by SAM analysis-Host/Untreated-18 hpi (TableS3 PubmedID:15546348) AT1G77510,AT3G28940,AT4G14400,AT1G78100,AT5G42100,AT5G28540,AT1G45145,AT1G27350,AT5G61790,AT3G04720,AT3G45640,AT2G33120,AT1G72910,AT3G17710,AT2G17120,AT5G21090,AT5G42050,AT5G06320,AT3G51730,AT2G25260,AT5G13030,AT5G54810,AT5G44420,AT3G22440,AT1G75830,AT4G31500,AT4G36990,AT5G01820,AT1G80040,AT2G22690,AT4G29060,AT1G15670,ATCG01300,AT3G46970 ZIMMERLI_SAM_HOST/UNTREATED-18HPI_DN Downregulated genes for clones selected by SAM analysis-Host/Untreated-18 hpi (TableS3 PubmedID:15546348) AT2G29630,AT1G68010,AT4G33960,AT5G48790,AT2G33800,AT1G25390,AT1G61770,AT5G28840,AT5G47110,AT2G36240,AT2G25080,AT2G40490,AT5G23060,AT5G15530,AT1G54780,AT1G20010,AT1G69295,AT1G43670,AT5G14970,AT2G05070,AT5G61410,AT4G08950,AT2G06520,AT5G62350,AT3G57820,AT3G16240,AT5G64310,AT1G31330,AT5G28750,AT2G28900,AT3G52180,AT4G16630,AT1G67870,AT3G44890,AT4G29510,AT1G58290,AT4G12420,AT3G26060,AT2G26080,AT5G05740,AT1G49740,AT1G32330,AT3G47650,AT1G19120,AT4G05180,AT2G37220,AT1G58100,AT1G20340,AT4G39330,AT1G09340,AT3G54050,AT1G04820,AT1G05850,AT2G38120,AT3G54500,AT5G19940,AT1G60950,AT5G65950,AT5G65720,AT3G01500,AT1G80380,AT1G74970,AT4G17340,AT4G09650,AT4G29905,AT4G16620 ZIMMERLI_SAM_HOST/UNTREATED-24HPI_UP Upregulated genes for clones selected by SAM analysis-Host/Untreated-24 hpi (TableS3 PubmedID:15546348) AT5G42100,AT1G78100,AT5G21090,AT3G28940,AT1G77510,AT1G45145,AT3G17710,AT5G28540,AT5G42050,AT1G27350,AT5G61790,AT4G31500,AT5G01820,AT3G45640,AT2G17120,AT2G33120,AT1G72910,AT5G15530,AT4G36990,AT5G13030,AT4G14400,AT3G04720,AT5G54810,AT5G06320,AT2G22690,AT3G51730,AT1G15670,AT5G44420,AT1G80040 ZIMMERLI_SAM_HOST/UNTREATED-24HPI_DN Downregulated genes for clones selected by SAM analysis-Host/Untreated-24 hpi (TableS3 PubmedID:15546348) AT1G75830,AT1G32330,AT1G43670,AT1G58290,AT1G20010,ATCG01300,AT2G29630,AT3G22440,AT1G31330,AT4G12420,AT1G54780,AT3G54500,AT2G06520,AT2G26080,AT5G28840,AT1G04820,AT1G69295,AT2G33800,AT2G36240,AT4G16630,AT2G40490,AT5G64310,AT5G61410,AT2G25260,AT3G46970,AT4G29510,AT4G29060,AT1G68010,AT5G23060,AT5G28750,AT1G19120,AT1G67870,AT2G05070,AT4G33960,AT5G05740,AT1G09340,AT1G25390,AT1G61770,AT5G48790,AT5G65950,AT1G20340,AT4G05180,AT4G08950,AT1G05850,AT3G57820,AT3G44890,AT1G80380,AT2G38120,AT5G14970,AT3G26060,AT3G16240,AT5G62350,AT5G19940,AT2G37220,AT1G58100,AT1G74970,AT2G25080,AT3G52180,AT5G47110,AT4G17340,AT5G65720,AT1G49740,AT4G39330,AT1G60950,AT2G28900,AT3G47650,AT3G01500,AT3G54050,AT4G09650,AT4G29905,AT4G16620 ZIMMERLI_SAM_NONHOST/UNTREATED-8HPI_UP Upregulated genes for clones selected by SAM analysis-Nonhost/Untreated-8 hpi (TableS3 PubmedID:15546348) AT3G28940,AT4G31500,AT4G14400,AT3G04720,AT5G21090,AT1G15670,AT5G01820,AT5G65720,AT5G13030,AT3G17710,AT1G78100,AT4G36990,AT5G44420,AT2G22690,AT5G42050,AT5G06320,AT3G51730,AT3G45640,AT5G54810,AT2G17120,AT1G43670,AT1G19120,AT4G05180,AT1G27350,AT2G36240,AT1G75830,AT1G80040,AT1G45145,AT1G77510,AT5G64310,AT4G08950,AT3G47650,AT1G68010,AT1G58100,AT2G28900,AT3G57820,AT1G31330,AT1G72910,AT2G40490,AT1G20010,AT5G62350,AT2G33120,AT1G05850,AT5G48790,AT1G32330,AT5G47110,AT1G60950,AT5G61410 ZIMMERLI_SAM_NONHOST/UNTREATED-8HPI_DN Downregulated genes for clones selected by SAM analysis-Nonhost/Untreated-8 hpi (TableS3 PubmedID:15546348) AT3G54500,AT1G20340,AT1G58290,AT4G12420,AT5G61790,AT3G26060,AT5G15530,AT5G19940,AT1G04820,AT5G28750,ATCG01300,AT5G14970,AT2G33800,AT1G61770,AT3G46970,AT3G54050,AT1G80380,AT4G17340,AT3G16240,AT5G23060,AT3G44890,AT4G16630,AT1G09340,AT3G22440,AT1G25390,AT5G28540,AT3G52180,AT5G05740,AT3G01500,AT2G38120,AT2G25260,AT1G67870,AT2G06520,AT4G29510,AT2G26080,AT1G54780,AT4G29060,AT5G42100,AT1G74970,AT2G37220,AT2G25080,AT4G33960,AT2G29630,AT1G49740,AT5G28840,AT4G29905,AT4G09650,AT1G69295,AT5G65950,AT4G39330,AT2G05070,AT4G16620 ZIMMERLI_SAM_NONHOST/UNTREATED-18HPI_UP Upregulated genes for clones selected by SAM analysis-Nonhost/Untreated-18 hpi (TableS3 PubmedID:15546348) AT3G28940,AT3G04720,AT2G17120,AT1G75830,AT5G44420,AT1G45145,AT1G77510,AT5G61790,AT5G21090,AT1G78100,AT5G42050,AT4G36990,AT2G33120,AT3G45640,AT3G17710,AT5G06320,AT1G27350,AT5G13030,AT1G72910,AT5G54810,AT5G42100,AT5G28540,AT4G31500,AT4G14400,AT3G51730,AT3G22440,AT5G01820,AT1G15670,AT1G68010,AT2G22690,AT3G46970,AT5G28840,AT5G15530 ZIMMERLI_SAM_NONHOST/UNTREATED-18HPI_DN Downregulated genes for clones selected by SAM analysis-Nonhost/Untreated-18 hpi (TableS3 PubmedID:15546348) AT1G80040,AT4G33960,AT2G28900,AT2G05070,AT3G52180,AT5G05740,AT1G54780,AT2G29630,ATCG01300,AT1G20010,AT1G69295,AT2G36240,AT1G43670,AT1G67870,AT5G28750,AT5G62350,AT4G29510,AT2G33800,AT5G48790,AT2G25260,AT5G14970,AT3G26060,AT5G64310,AT2G40490,AT5G65950,AT4G08950,AT3G57820,AT2G38120,AT3G54500,AT2G25080,AT1G05850,AT1G58290,AT1G58100,AT5G61410,AT1G61770,AT4G16630,AT3G44890,AT5G47110,AT4G29060,AT1G25390,AT3G47650,AT3G16240,AT5G23060,AT1G80380,AT1G49740,AT1G32330,AT2G06520,AT1G04820,AT4G05180,AT4G39330,AT5G65720,AT2G37220,AT4G17340,AT4G12420,AT4G09650,AT1G31330,AT5G19940,AT1G20340,AT2G26080,AT1G09340,AT4G29905,AT1G19120,AT1G60950,AT1G74970,AT3G54050,AT3G01500,AT4G16620 ZIMMERLI_SAM_NONHOST/UNTREATED-24HPI_UP Upregulated genes for clones selected by SAM analysis-Nonhost/Untreated-24 hpi (TableS3 PubmedID:15546348) AT1G75830,AT5G44420,AT1G45145,AT3G28940,AT4G31500,AT5G21090,AT3G04720,AT5G42050,AT4G36990,AT1G77510,AT5G61790,AT1G15670,AT1G27350,AT5G42100,AT1G72910,AT3G51730,AT1G78100,AT5G06320,AT4G14400,AT3G45640,AT5G28540,AT1G80040,AT5G54810,AT3G22440,AT3G17710,AT2G22690,AT2G33120,AT5G13030,AT5G01820,AT2G17120 ZIMMERLI_SAM_NONHOST/UNTREATED-24HPI_DN Downregulated genes for clones selected by SAM analysis-Nonhost/Untreated-24 hpi (TableS3 PubmedID:15546348) AT3G16240,AT4G12420,AT3G57820,AT2G25260,AT1G25390,AT5G23060,AT3G54500,AT4G29060,AT1G61770,AT5G64310,AT2G26080,AT5G65720,AT1G49740,AT1G04820,AT1G69295,AT1G20340,AT1G80380,AT5G15530,AT1G05850,AT1G43670,AT4G09650,AT2G36240,AT2G06520,AT1G32330,AT1G67870,AT1G68010,AT4G16630,ATCG01300,AT4G17340,AT3G46970,AT1G19120,AT4G33960,AT4G08950,AT2G29630,AT1G31330,AT5G61410,AT1G54780,AT5G65950,AT5G48790,AT5G28840,AT4G05180,AT5G19940,AT5G47110,AT4G39330,AT1G58100,AT2G33800,AT5G62350,AT3G44890,AT1G20010,AT2G40490,AT4G29510,AT1G09340,AT3G47650,AT3G26060,AT5G28750,AT2G25080,AT2G38120,AT5G14970,AT5G05740,AT1G58290,AT2G37220,AT1G74970,AT1G60950,AT3G52180,AT2G05070,AT3G54050,AT3G01500,AT4G29905,AT2G28900,AT4G16620 GUTIERREZ_UNSTABLE-ATGUTS_DIFF Arabidopsis thaliana genes with unsTable transcripts (atGUTs) (TableS2 PubmedID:12167669) AT2G40000,AT4G18010,AT5G05440,AT3G19680,AT3G54810,AT3G45970,AT5G03430,AT1G17420,AT5G63790,AT3G44260,AT4G02380,AT1G09070,AT2G22430,AT3G23030,AT5G67480,AT1G66160,AT3G15210,AT4G24570,AT3G15450,AT2G32150,AT5G20880,AT1G57990,AT4G17500,AT1G32920,AT1G35140,AT5G64260,AT3G52400,AT1G32130,AT1G37130,AT2G40140,AT1G25550,AT3G45640,AT1G13260,AT1G75900,AT3G56880,AT3G56360,AT4G32020,AT2G19800,AT1G78080,AT1G01550,AT3G47960,AT2G41640,AT2G26190,AT5G04340,AT4G31550,AT1G69890,AT1G19180,AT2G24570,AT4G19230,AT3G11410,AT4G29950,AT1G47210,AT3G48360,AT4G30440,AT4G15760,AT5G61590,AT2G23810,AT3G62550,AT5G07580,AT1G21130,AT5G18120,AT3G55240,AT4G34150,AT4G01870,AT5G41080,AT5G56190,AT3G02550,AT4G12040,AT5G62570,AT3G12630,AT4G31500,AT1G74950,AT3G26740,AT2G35260,AT1G49500,AT4G17230,AT1G75800,AT5G37770,AT1G72450,AT2G29450,AT1G32640,AT2G41410,AT2G39730,AT3G57520,AT4G27280,AT5G25350,AT1G80920,AT3G16720,AT4G02200,AT5G19190,AT5G59550,AT5G61600,AT1G21100,AT4G32060,AT1G18300 PASSARINHO_DEX+CHX-TREATED-35S-BBM:GR/DEX+CHX-TREATED-WT-SEEDLING_UP Up-regulated in CandiDate BABY BOOM target genes in DEX + CHX-treated 35S::BBM:GR seedlings as compared to DEX + CHX-treated wild-type seedlings (Table2 PubmedID:18663586) AT5G17430,AT5G39820,AT1G16070,AT1G65300,AT5G46640,AT3G60580,AT1G51140,AT5G10960,AT5G45780,AT2G34020,AT4G11320,AT1G61610,AT5G59100,AT5G48130,AT3G54780,AT5G48510,AT4G38140,AT3G19380,AT4G35070,AT3G15680,AT5G47440,AT5G03260,AT4G03210,AT5G48900,AT5G01870,AT1G76790,AT4G02290,AT4G27520,AT5G48140,AT3G26200,AT2G03830,AT4G34970,AT5G11890,AT4G14690,AT5G62490,AT1G64590,AT5G02550,AT4G02360,AT5G44560,AT3G18800,AT2G41800,AT3G02960,AT3G60150 PASSARINHO_BBM_UP Upregulated BBM target genes identified as significantly in all three statistical analyses (ANOVA, SAM, t-test) (TableS2 PubmedID:18663586) AT5G17430,AT5G48130,AT3G26200,AT5G39820,AT2G03830,AT1G16070,AT4G34970,AT3G54780,AT5G45780,AT2G34020,AT5G47440,AT5G03260,AT4G11320,AT5G11890,AT4G03210,AT5G48510,AT4G14690,AT4G38140,AT1G65300,AT5G48900,AT5G62490,AT5G46640,AT3G60580,AT1G64590,AT3G19380,AT4G35070,AT5G02550,AT5G01870,AT4G02360,AT5G44560,AT1G76790,AT4G02290,AT1G61610,AT4G27520,AT3G18800,AT5G48140,AT1G51140,AT2G41800,AT5G10960,AT3G15680,AT5G59100,AT3G02960,AT3G60150,AT5G53290,AT5G08260,AT5G47550,AT2G02100,AT3G07130,AT4G20140,AT1G09570,AT4G27950,AT5G17630,AT1G64170,AT2G38400,AT4G10270,AT1G17190,AT5G07610,AT5G44440,AT4G15100,AT2G40170,AT2G42840,AT3G23410,AT5G67360,AT1G20620,AT5G60110,AT1G77830,AT2G43530,AT3G60140,AT3G16430,AT5G23820,AT1G04380,AT5G56080,AT1G79940,AT2G38080,AT3G47800,AT3G45710,AT2G01420,AT2G42460,AT2G25220,AT3G09280,AT5G67090,AT5G47050,AT5G58750,AT2G44770,AT3G12160,AT1G12090,AT5G20630,AT5G14230,AT4G04890,AT2G41780,AT1G68560,AT1G28330,AT1G14720,AT5G14450,AT2G27360,AT2G25520,AT3G54400,AT1G03230,AT4G36620,AT5G64260,AT3G50410,AT3G11720,AT3G45690,AT3G14220,AT3G22120,AT4G36220,AT3G16420,AT5G01670,AT3G19820,AT5G51750,AT2G05520,AT5G02260,AT3G20370,AT4G15530,AT2G31390,AT2G28900,AT3G05260,AT1G02810,AT3G12145,AT1G55360,AT1G69610,AT2G39310,AT2G45190,AT4G33810,AT3G32047,AT5G22310,AT1G12860,AT5G18220,AT1G77840,AT1G67910,AT4G00110,AT1G21920,AT5G66870,AT2G03240,AT3G04290,AT2G45470,AT5G60470 HORVATH_HYBRIDIZED_CDNAS_SHOOT-APICE_UP Upregulated Genes that hybridized preferentially to labeled cDNAs derived from shoot apices from the designated species (Table1 PubmedID:12662315) AT1G26910,AT1G70600,AT5G10390,AT5G65360,AT5G10520,AT2G21790,AT1G04820,AT1G20010,AT5G23860,AT2G18850,AT1G63690,AT3G58460 HORVATH_HYBRIDIZED_CDNAS_LEAVES_UP Upregulated Genes that hybridized preferentially to labeled cDNAs derived from mature leaves from the designated species (Table1 PubmedID:12662315) AT2G39730,AT3G26710,AT4G32900,AT4G37930,AT4G38970,AT5G26780,AT5G45170,AT5G60680,AT1G61770,AT2G13360,AT5G45510 HORVATH_POPLAR_UP Upregulated genes by average expression ratio of Poplar (signal from leaf divided by the signal from shoot apices) after normalization by loess regression. (TableS1 PubmedID:12662315) AT5G60680,AT4G32900,AT4G38970,AT5G26780,AT4G37930,AT3G26710,AT2G39730,AT4G31390,AT5G66570,AT1G18030,AT2G26080,AT1G53250,AT4G08950,AT1G15020,AT5G65470,AT3G49590,AT2G28450,AT1G61770,AT5G61410,AT1G09340,AT5G45170,AT2G41180,AT4G14330,AT1G49980,AT1G11700,AT3G43160,AT3G63520,AT2G27020,AT5G41410,AT3G60750,AT3G60150,AT1G01080,AT3G12780,AT5G53340,AT4G04770,AT5G45300,AT1G32060,AT1G11670,AT5G36790,AT2G26990,AT2G40770,AT3G01210,AT5G67100,AT2G13360,AT5G43850,AT5G55130,AT2G05620,AT4G01050,AT1G19120,AT1G20630,AT5G51040,AT5G43370,AT2G28810,AT1G51500,AT5G37790,AT1G05180,AT4G35090,AT2G29630,AT1G35680,AT4G10340,AT5G28150,AT1G08250,AT5G46800,AT5G35990,AT3G01500,AT1G50250,AT2G20730,AT1G15110,AT5G37600,AT1G56190,AT1G04430,AT2G03240,AT1G68010,AT2G34930,AT5G64040,AT1G20620,AT2G41220,AT3G26400,AT3G48870,AT1G23310,AT4G19410,AT1G14280,AT1G62870,AT5G16210,AT3G06580,AT1G07040,AT2G38230,AT5G38420,AT4G30690,AT5G16470,AT3G54050,AT4G00220,AT3G62330,AT1G14720,AT4G16620,AT4G38350,AT1G11740,AT4G03030,AT1G64680,AT2G30210,AT1G67090,AT3G17510,AT3G56290,AT5G66470,AT5G66190,AT1G23740,AT5G15880,AT3G61470,AT1G70820,AT1G42960,AT2G04700,AT2G18960,AT1G49970,AT3G16980,AT5G09660,AT1G03130,AT5G38430,AT5G32450,AT1G27510,AT1G14610,AT2G20400,AT3G46200,AT3G25690,AT3G63490,AT1G22700,AT2G43460,AT1G52230,AT4G05320,AT1G77590,AT4G30190,AT3G19950,AT5G20300,AT4G08790,AT5G01950,AT3G63250,AT2G36170,AT5G19180,AT2G21210,AT5G01830,AT3G59630,AT4G38090,AT1G20050,AT5G13650,AT3G46970,AT5G49830,AT3G14420,AT3G52260,AT3G09210,AT1G60610,AT3G55440,AT5G47090,AT3G03940,AT1G15950,AT2G27110,AT1G61700,AT1G55810,AT4G17090,AT5G28740,AT3G56250,AT2G11260,AT3G14240,AT1G57620,AT1G43670,AT5G58260,AT5G02910,AT1G11860,AT4G27470,AT5G60360,AT4G34740,AT3G47960,AT5G20620,AT3G18760,AT3G46210,AT4G16170,AT1G62180,AT2G47390,AT5G50460,AT5G04070,AT4G23430,cab,AT1G18730,AT3G52470,AT3G47450,AT1G64660,AT1G44000,AT3G50820,AT1G74910,AT5G10540,AT4G07820,AT5G43100,AT4G35160,AT1G19740,AT4G25390,AT1G04170,AT4G18060,AT5G64310,AT1G61520,AT3G58640,AT1G04140,AT4G04640,AT5G62790,AT5G23750,AT3G11810,AT3G09390,AT4G04970,AT1G19660,AT3G22600,AT5G04610,AT5G60790,AT4G01150,AT5G51970,AT4G31080,AT3G52850,AT5G61790,AT4G34680,AT3G17240,AT1G56700,AT5G15710,AT2G05710,AT4G02890,AT2G18110,AT5G46030,AT1G79900,AT4G38770,AT3G02470,AT1G28520,AT3G19450,AT3G19960,AT1G80420,AT2G21390,AT1G21660,AT1G20020,AT5G17310,AT5G58330,AT1G54000,AT5G49910,AT1G06360,AT1G15270,AT5G18190,AT1G35560,AT5G66040,AT2G05070,AT1G80870,AT3G55470,AT1G31910,AT5G42030,AT2G40490,AT2G24270,AT3G59850,AT5G60920,AT1G69830,AT5G54900,AT3G49070,AT5G03240,AT3G13440,AT3G26650,AT1G06680,AT2G02130,AT1G35580,AT3G04240,AT1G56580,AT1G50480,AT2G38120,AT3G45310,AT1G21360,AT3G58610,AT2G18230,AT5G28080,CI0012,AT2G32570,AT5G47540,AT2G18440,AT5G48810,AT1G23800,AT1G09230,AT3G16090,AT1G75750,AT2G39770,AT4G24520,AT5G45670,AT3G59910,AT2G23340,AT2G01450,AT4G27800,AT4G19840,AT2G17760,AT2G37240,AT1G68570,AT1G66200,AT2G35210,AT3G08840,AT4G36860,AT1G12360,AT1G17840,AT3G46010,AT3G25530,AT3G43690,AT2G45140,AT4G01620,AT2G29080,AT4G31330,AT3G52180,AT2G16990,AT4G32940,AT3G61600,AT5G09920,AT5G10750,AT1G27950,AT3G57870,AT5G43750,AT5G50850,AT1G56600,L4,AT1G04970,AT3G26370,AT5G37720,AT4G26670,AT1G53670,AT5G43150,AT5G40510,AT2G22680,AT5G04280,AT3G62680,AT1G58250,AT5G05110,AT1G58100,AT3G23090,AT1G75460,AT2G35940,AT4G02270,AT3G52090,AT1G56070,AT5G16270,AT5G56350,AT5G15950,AT3G17770,AT4G13770,AT5G38410,AT1G51090,AT5G17520,AT1G25280,AT3G17800,AT1G07310,AT2G31980,AT5G51490,AT5G64570,AT5G11170,AT3G12260,AT2G35370,AT4G20380,AT4G12800,AT1G08550,AT3G63260,AT5G44110,AT5G11490,AT5G55730,AT3G56940,AT1G13300,AT1G70330,ATPLP,AT4G27960,AT1G08730,AT1G15750,AT1G07940,AT1G03030,AT5G42050,AT4G23820,AT1G28250,AT5G66240,AT4G17300,AT2G23120,AT1G19440,AT4G09500,AT5G04770,AT2G21140,AT5G40650,AT2G16640,AT1G01280,AT5G05470,AT4G27990,AT1G65960,AT2G40970,AT3G02750,AT5G13760,AT2G46820,AT2G43060,AT4G27870,AT1G73030,AT1G03040,AT2G46260,AT4G22720,AT5G19290,AT3G05410,AT1G70410,AT5G50920,AT2G21330,AT5G09410,AT1G17420,AT1G79040,AT4G29910,AT4G19070,AT1G10950,AT3G04790,AT2G21170,AT3G15850,AT1G03250,AT1G18170,AT1G23960,AT4G34000,AT4G30240,AT1G55490,AT4G09010,AT5G20660,AT4G16780,AT3G46960,AT3G53830,AT1G20330,AT2G45460,AT4G38520,AT5G28900,AT5G03170,AT2G42500,AT4G36940,AT3G20300,AT1G04120,AT2G32080,AT1G29190,AT4G14020,AT1G03930,AT5G51840,AT3G23820,AT4G11970,AT4G34480,AT1G48450,AT4G36710,AT2G06520,AT4G31530,AT2G25960,AT4G18710,AT4G05050,AT3G11600,AT4G32280,AT3G03270,AT1G63600,AT4G21280,AT1G30360,AT3G50350,AT5G03260,AT4G01850,AT1G55670,AT2G40830,AT1G67340,AT3G17780,AT4G13780,AT1G14650,AT5G13630,AT5G61030,AT5G03900,AT2G46390,AT2G01060,AT1G65600,AT1G04950,AT4G26850,AT2G45920,AT1G76670,AT5G01710,AT1G51590,AT1G48300,AT5G15730,AT5G03460,AT3G16140,AT1G68660,AT3G11130,AT2G04940,AT4G16410,AT1G77090,AT3G60410,AT5G07020,AT4G03280,AT5G52900,AT4G40040,AT2G37620,AT5G02380,AT2G31260,AT3G63420,AT3G10340,AT3G02050,AT5G62190,AT5G23550,AT2G26800,AT4G26910,AT2G22300,AT3G48990,AT1G64470,AT1G19350,AT1G17220,AT2G39280,AT1G68370,AT5G64100,AT1G64350,AT5G06120,AT4G38530,AT5G59150,SCB10P,AT5G49890,AT5G51110,AT3G12360,AT1G13120,AT2G01620,AT2G38130,AT3G60080,AT4G36420,AT5G58100,AT1G14830,AT3G13530,AT1G74940,AT2G20420,AT3G07740,AT1G02640,AT3G61440,AT1G12930,AT1G21060,AT5G04510,AT1G21680,AT5G51170,AT1G78240,AT3G45870,AT1G69840,AT4G38920,AT3G52340,AT1G28280,AT3G18940,AT3G43960,AT3G10060,AT5G12200,AT2G16530,AT3G46780,AT2G15430,AT1G64890,AT5G60200,AT1G64110,AT3G12940,AT5G16050,AT1G79230,AT4G16900,AT2G43130,AT3G01310,AT1G68140,AT5G17330,AT3G02520,AT4G33300,AT1G25520,AT1G12680,AT5G49350,AT4G21960,AT5G12860,AT3G13580,AT5G22640,AT5G65110,AT4G24290,AT5G42650,AT1G80460,AT3G26500,AT5G25220,AT1G53500,AT2G35470,AT2G35650,AT5G64300,AT5G01790,AT1G48550,AT2G45670,AT2G19450,AT2G20240,AT3G48170,AT4G21490,AT2G29070,AT1G72390,AT5G14120,AT2G13370,AT2G43160,AT1G65270,AT1G67740,AT5G28840,AT1G05010,AT1G14870,AT5G37370,AT4G22290,AT3G55360,AT1G06040,AT1G36060,AT2G31130,AT1G49740,AT2G30070,AT1G20440,AT1G13440,AT1G48440,AT5G22920,AT2G20890,AT5G39990,AT2G37450,AT2G25260,AT2G16470,AT1G74470,AT4G35830,AT5G54760,AT5G53300,AT4G14080,AT5G02800,AT1G70760,AT5G47990,AT3G27750,AT4G15930,AT1G25230,AT5G01650,AT1G60650,AT3G16120,AT2G28840,AT3G52250,AT2G17020,AT1G07010,AT1G68620,AT5G02850,AT5G16310,AT3G14830,AT2G32480,AT5G18970,AT1G24510,AT3G61620,AT4G11420,AT5G19980,AT2G27510,AT1G73080,AT5G13100,AT4G20410,AT5G09810,AT1G74310,AT2G20900,AT1G76060,AT1G30400,AT3G10020,AT4G18390,AT4G11150,AT3G61580,AT1G30870,AT5G57360,AT5G17650,AT3G52590,AT5G09900,AT5G19340,AT3G44880,CI0002,AT1G17280,AT1G68490,AT3G01120,AT5G53170,AT1G62380,AT2G01100,AT2G43100,AT1G04240,AT3G19340,AT1G80410,AT5G15180,AT5G10780,AT3G23740,AT1G42970,AT1G58290,AT3G27925,AT4G01950,AT1G18070,AT3G13750,AT3G56050,AT5G01920,AT2G23430,AT4G33410,AT2G23910,AT5G59220,G11D9T7,AT4G14880,AT5G23060,AT1G63010,AT2G01690,AT1G47240,AT1G27090,AT2G41710,AT5G10550,AT3G06080,AT2G31440,AT1G07930,AT4G30440,AT1G71980,AT3G03190,AT1G64360,AT5G05170,AT5G09620,AT2G14910,AT5G37260,AT3G58730,AT2G34430,AT5G58270,AT2G03400,AT4G14000,AT5G10020,AT1G53910,AT5G27380,AT5G54470,AT3G24510,AT3G48530,AT1G71020,AT4G27900,AT1G11210,AT1G56230,AT3G22310,CI0001,AT3G19110,AT5G50250,AT1G10940,AT2G48130,AT4G24690,AT1G22850,AT1G06090,AT1G08380,AT3G60300,AT5G02120,AT4G35740,AT3G16180,AT1G17370,AT5G13740,AT3G62410,AT2G27280,CI0003,AT3G06330,AT5G17280,AT3G05970,AT1G19020,AT2G46500,AT3G06510,AT1G74320,AT4G16360,AT5G13640,AT2G42780,AT2G41470,AT4G37470,AT1G04310,AT1G15820,AT3G52230,AT1G21270,ATIMPX,AT1G56300,AT2G25080,AT1G25440,AT3G51500,AT5G51570,AT1G55800,AT2G47450,AT3G54500,AT2G45030,AT2G27680,AT4G28240,AT1G06070,AT4G30660,AT1G36050,AT5G23050,AT1G10140,AT4G12590,AT1G10760,AT5G16300,AT5G57580,AT1G79830,AT4G16340,AT5G42560,AT2G36410,AT4G01880,AT5G14420,AT4G09580,AT3G11660,AT5G26570,AT2G36360,AT1G04000,AT4G20150,AT2G38020,AT4G32660,AT1G64230,AT5G41600,AT3G13350,AT5G14260,AT3G22480,AT4G21540,AT1G09830,AT1G18870,AT5G43060,AT1G25550,AT3G01790,AT4G24160,AT2G27860,AT5G58570,AT1G65260,AT2G01190,AT1G21830,AT1G26150,AT5G37510,AT2G04800,AT2G43330,AT1G05320,AT4G12360,AT3G01290,AT2G47350,AT3G45300,AT5G55810,AT5G66790,AT4G00660,AT3G48560,AT5G14430,AT2G35450,AT2G36820,AT4G17830,AT2G03350,AT4G08180,AT3G10420,AT4G35910,AT1G49240,AT3G50690,AT3G13790,AT5G25100,AT1G69410,AT3G51520,AT5G55120,AT1G34000,AT5G07580,AT4G37160,AT2G39140,AT4G25520,AT3G08940,AT1G18420,AT4G13500,AT1G73260,AT1G60730,AT4G13250,AT3G52880,AT2G31730,AT1G07230,AT5G35690,AT4G28890,AT4G15940,AT3G47600,AT1G34200,AT4G00550,AT5G07920,AT3G11910,AT2G42490,AT3G16840,AT1G76030,AT1G14910,AT3G62120,AT5G42730,AT4G00730,AT4G30290,AT1G22660,AT5G01530,AT2G01750,AT3G03250,AT5G18210,AT3G62020,AT4G02600,AT2G41940,AT1G76910,AT2G45510,AT2G30140,AT3G29760,P1504,AT5G61060,AT3G10640,AT3G20820,AT3G19670,AT1G09310,AT4G13430,AT3G18920,AT5G45620,AT5G52030,AT3G05380,AT1G53050,AT5G53370,AT3G53350,AT3G57340,AT4G37870,AT1G79930,AT3G10230,AT4G02440,AT3G26090,AT3G60190,AT4G26160,AT3G15260,AT5G16780,AT1G44170,AT5G23575,AT5G24320,AT3G55910,AT3G23890,AT3G60250,AT1G54770,AT3G48780,AT5G05690,AT1G31780,AT1G07260,AT1G02840,AT2G37550,AT3G13080,AT4G01310,AT3G29240,AT1G04100,AT5G26750,AT3G54190,AT1G07920,AT4G24620,AT1G71840,AT1G12440,AT3G08590,AT1G14150,AT1G12810,AT3G06290,AT1G17470,AT5G18100,AT5G22760,AT4G20390,AT1G50360,AT2G37080,AT3G57170,AT1G43690,AT5G58730,AT2G33740,AT4G19050,AT4G09330,AT4G12850,AT5G41670,AT1G65460,AT1G72710,AT2G35440,AT1G51370,AT5G46860,AT5G35630,AT1G50630,AT2G47620,AT3G03090,AT2G35040,AT2G41410,AT3G22460,AT5G63550,AT1G64720,AT5G61720,AT1G22500,AT3G16560,AT3G15290,AT1G11580,AT3G09190,AT2G46800,AT1G77630,AT2G36400,L2,AT1G64330,AT3G22970,AT5G40780,AT1G32760,AT1G16590,AT2G43680,AT5G16010,AT3G03330,AT1G16320,AT5G24700,AT4G17870,AT2G33150,AT4G08350,AT1G07890,AT3G15370,AT3G05880,AT3G46630,AT1G22990,AT1G06270,AT5G20630,AT3G19170,AT3G57650,AT1G27910,AT5G60900,AT2G02390,AT1G62390,AT5G13980,AT5G25350,AT1G16870,AT1G51250,AT4G34130,AT4G39560,AT1G79850,AT1G30470,AT5G05980,AT4G36440,AT1G64630,AT1G76880,AT1G52100,AT2G23320,AT2G41900,AT1G26930,AT2G15320,AT3G11450,AT3G05080,AT5G48300,AT5G53460,AT5G0441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60,AT1G52220,AT1G30510,AT3G23590,AT1G16040,AT5G11280,AT1G11200,AT5G13020,AT1G78150,AT3G27270,AT5G54770,AT1G24050,AT1G66870,AT2G27190,AT5G02260,AT5G53350,AT4G19210,AT3G27770,AT4G18010,AT3G29270,AT3G02450,AT1G16080,AT1G53590,AT1G31330,SCH1P,AT3G47700,AT3G54140,AT1G07990,AT3G27390,AT4G19350,AT2G46370,AT5G10940,AT1G27930,AT1G02500,AT5G44340,AT1G43800,AT3G29360,AT4G39950,AT2G29590,AT1G23330,AT2G32260,AT5G10350,AT5G12120,AT3G12020,AT1G57720,AT1G43650,AT2G02950,ES13,AT1G74370,AT5G46110,AT3G04470,AT3G03380,AT3G49970,AT3G05200,AT5G42990,AT2G20990,AT4G03560,AT1G48960,AT5G01250,AT4G36900,AT5G20230,AT3G19540,AT1G55480,AT1G07480,AT3G60620,AT5G20490,AT5G64090,AT5G60820,AT3G07160,AT1G18140,AT5G54100,AT5G59400,AT4G37900,AT4G26750,AT4G38080,AT5G06300,AT5G46790,AT5G11090,AT3G63410,AT1G10180,AT2G01340,AT5G23190,AT5G11500,AT5G11200,AT4G17390,AT3G47510,AT5G01390,AT3G24590,AT2G19070,AT3G51410,AT3G02070,AT5G06140,AT5G54430,AT2G32520,AT3G63170,AT1G54130,AT5G19990,AT1G08710,AT5G55620,AT5G61510,AT3G57050,AT3G10410,AT5G02040,AT3G51910,AT1G16010,AT1G64970,AT3G51460,AT4G23010,AT3G46100,AT4G27880,AT4G02340,AT4G27260,AT3G43220,AT1G70810,AT5G64410,AT5G66200,AT5G21170,AT2G33340,AT5G12980,AT2G29330,AT2G36240,AT1G25220,AT3G60480,AT5G01090,AT1G18680,CI0019,AT1G25390,AT1G32470,AT4G34920,AT3G04610,AT1G21640,AT3G46510,P1127,AT4G29060,AT1G35230,AT5G37740,AT3G17450,AT2G14260,AT4G05130,AT4G16850,AT2G42320,PATFT,AT1G72840,AT1G33250,AT5G64460,AT5G42540,AT2G40170,AT1G74160,AT5G67420,AT2G18700,AT5G55190,AT5G06700,AT2G05910,AT1G24260,AT1G03310,AT1G75840,AT3G07020,AT5G56540,AT1G73460,AT1G18720,AT4G25500,AT4G22770,AT1G12080,AT1G69460,AT4G21210,AT5G42590,AT2G18970,AT3G24500,AT3G60720,AT1G01090,AT3G49890,AT2G29450,AT1G77370,AT2G16740,AT5G55310,AT2G01630,AT2G33310,AT5G08590,AT1G55900,AT4G16590,AT1G63120,AT3G13930,AT4G18810,AT2G21960,AT3G17390,AT3G25070,AT3G49870,AT3G18030,AT2G28200,AT1G06570,AT3G06590,AT1G30120,AT1G07250,AT3G26900,AT2G22720,AT3G61050,AT3G61480,AT1G29800,AT5G58500,AT1G05850,AT3G02420,AT1G69700,AT1G33490,AT3G52610,AT3G15970,AT1G01230,AT5G48210,AT5G62280,AT5G64200,AT1G33480,AT1G18690,AT3G52920,AT2G48140,AT1G50740,AT1G26110,AT4G24680,AT3G02390,AT5G19760,AT3G56060,AT5G42470,AT2G30930,AT1G27000,AT5G25770,AT1G15780,AT5G67480,AT5G54680,AT4G32570,AT2G13820,AT5G60390,AT1G14370,ccr2,AT2G38980,AT3G53500,AT1G27770,AT5G46020,AT5G61910,AT4G13340,AT2G39340,AT5G02810,AT5G51820,AT1G35420,AT1G47640,AT4G33120,AT2G15620,AT5G57000,AT4G30760,AT2G18710,AT5G38990,AT5G18580,AT4G03430,AT3G19260,AT1G49820,AT4G24550,AT2G39050,AT4G33530,AT3G26780,AT5G47010,cca1,AT5G16730,AT3G13800,AT5G44080,AT5G39320,AT2G37430,AT3G27260,AT3G15730,AT5G47390,AT4G35480,AT5G42200,AT2G33250,AT2G39870,AT1G21400,AT5G52810,AT4G33610,AT2G38170,AT1G54990,AT2G20180,AT5G45130,AT1G64090,AT2G37090,AT1G49040,AT3G04120,AT2G43400,AT1G43900,AT4G15920,AT4G21810,AT3G08770,AT1G79430,AT3G20970,AT1G62790,AT5G17920,AT2G27150,AT2G39110,AT3G23050,AT3G46660,AT2G35840,AT2G47110,AT2G28630,AT5G64130,AT1G64710,AT2G01140,AT2G36930,AT3G17000,AT2G22660,AT5G13030,AT2G45200,AT2G43820,AT5G03520,AT2G45380,AT3G04880,AT4G28990,AT4G32410,AT2G42070,P1675,AT5G10760,AT1G52320,AT2G30400,AT1G59900,AT3G53970,AT1G65220,AT3G24450,AT5G02750,AT5G36940,AT2G43940,AT3G17650,AT5G54380,AT1G70160,AT5G48230,AT3G12490,AT5G16940,AT5G17530,AT1G18480,AT5G05740,AT3G27325,AT3G24050,AT4G39680,AT5G48380,AT5G06640,AT3G32980,AT1G08320,AT1G78570,AT5G64430,AT3G46980,AT4G03150,AT5G13430,AT2G22620,AT1G53510,AT1G67140,AT5G63220,AT5G51010,AT1G20340,AT2G44860,AT3G09220,AT5G54910,AT3G25230,AT1G53310,AT5G05310,AT2G42570,AT5G46500,AT1G54290,AT3G04560,AT3G52990,AT1G06950,AT2G45620,AT1G35320,AT1G02450,AT1G79090,AT5G05540,AT4G32070,AT5G01210,AT2G43170,AT5G04930,AT2G37200,AT1G20560,AT5G22830,AT2G44010,AT1G78780,AT5G65540,AT1G64750,AT3G17250,AT5G61240,AT2G43710,AT5G26860,AT2G10900,AT1G11840,ATIMPalpha,AT2G24550,AT1G20370,AT3G07910,AT5G43560,AT3G46450,AT5G60160,AT3G03870,AT1G80550,AT3G26520,AT4G27000,AT5G62880,AT5G57220,AT1G23040,AT3G49220,AT3G04550,AT5G22800,AT3G14940,AT4G30090,AT3G15820,AT5G64900,AT5G27150,AT5G65170,AT1G75500,AT3G47250,AT2G40760,AT5G52100,AT5G10920,AT3G12740,AT4G25450,AT3G01470,AT2G47510,AT4G25220,AT4G17880,AT5G06860,AT3G13445,AT5G02890,AT3G05000,AT4G20850,AT5G66490,AT1G76950,AT5G47050,AT3G28300,AT2G13540,AT1G64390,AT2G01830,AT2G38050,AT3G54230,AT3G27100,AT5G48800,AT1G73650,AT2G20960,AT3G07090,AT4G33080,AT2G06990,AT3G05710,AT1G53030,AT5G57800,AT2G06850,AT2G27580,AT1G05890,AT1G18020,AT1G54080,AT4G11190,AT1G73600,AT3G21390,AT4G11740,AT2G47330,AT1G10210,AT1G11430,AT1G12740,AT3G52400,AT3G16480,SED5,AT4G25680,AT1G49200,AT2G34560,AT1G34380,AT3G50370,AT3G08930,AT3G55800,AT3G22520,AT3G47070,AT1G19080,AT1G74120,AT2G33610,AT2G33790,AT5G42100,AT5G52230,AT1G79970,AT2G15820,AT2G44720,AT1G61310,AT4G09650,AT1G69080,AT3G13310,AT3G62860,AT1G18470,AT3G59940,AT1G56330,AT4G29950,AT2G26680,AT1G71270,ES5,AT5G20530,AT4G13670,AT1G23480,AT4G38540,AT1G75080,AT3G14280,AT5G40540,AT1G44820,AT4G12730,AT1G09570,AT5G26830,AT3G28100,AT1G16890,AT3G21540,AT1G29920,AT5G41870,AT1G80570,AT2G40890,AT2G01600,AT3G26970,AT5G27670,AT2G29980,AT3G28710,AT2G47470,AT1G48750,AT4G38630,AT1G54520,AT3G16370,AT5G27320,AT2G47850,AT4G09150,AT5G48250,AT5G55390,AT1G79810,AT5G40520,AT4G09050,AT2G01930,AT1G48520,AT1G30130,AT4G21650,AT1G62300,AT3G04450,AT1G50940,AT5G11800,AT1G27880,AT4G12880,AT1G71220,AT5G52430,AT5G15780,AT3G01560,AT3G50790,AT5G54740,AT1G51570,AT4G35330,AT3G44870,AT1G79010,AT1G03210,AT3G58840,AT1G07830,AT2G06210,AT5G56550,AT3G46430,AT2G27950,ATSEC12,AT5G64400,AT5G42290,AT3G20210,AT4G26300,AT5G45390,AT5G43430,AT4G19920,AT1G72700,AT1G32810,AT5G57040,AT1G66880,AT3G23730,AT3G21630,AT1G78360,AT2G32730,AT3G29170,AT3G56040,AT3G15610,AT3G48720,AT2G31150,AT1G17290,AT1G14710,AT2G44730,AT5G40980,AT1G23410,AT3G30720,AT5G62570,AT4G22690,AT2G43050,AT1G08410,AT4G15090,AT3G01540,AT1G26960,AT4G37980,AT3G12120,AT2G34690,AT3G51870,AT2G47710,AT1G76520,AT5G52200,AT2G05380,AT1G18740,AT1G53430,AT5G55210,AT4G24280,AT1G29400,AT4G24510,AT3G29780,AT2G27310,AT2G39960,AT4G15490,AT5G06710,AT4G35720,AT5G01750,AT5G24170,AT2G42880,AT1G29090,AT1G79750,AT4G29840,AT4G31340,AT1G54780,AT1G50900,AT2G37350,AT3G15660,AT2G37040,AT1G02200,AT2G01490,AT1G73930,AT5G59170,AT1G72610,AT1G54210,AT5G59890,AT3G46110,AT4G35490,AT5G66230,AT1G08540,AT1G21570,AT5G53090,AT5G59440,AT1G68300,AT2G17390,AT1G71310,AT5G44190,AT3G59950,AT1G08370,AT2G21650,AT4G16840,AT5G41960,AT2G24360,AT4G14440,AT2G20370,AT2G36830,AT2G36810,AT1G13080,AT1G19770,AT4G32050,AT5G19950,AT2G41530,AT1G68830,AT4G19190,AT5G40150,AT5G07470,AT3G17960,AT1G27850,AT1G76680,AT3G54510,AT3G01570,AT1G27310,AT4G05200,AT4G39570,AT3G06350,AT2G34470,AT3G50920,AT1G70230,AT5G35740,AT5G65140,AT2G01270,AT3G62270,AT5G01020,AT2G33120,AT4G15410,AT1G19720,AT1G09670,AT4G15530,AT1G49750,AT2G22500,AT5G28770,AT1G16740,AT5G27280,AT4G13020,AT3G23320,AT2G29400,AT4G39670,AT5G12210,AT5G67360,AT3G50380,AT3G02200,AT5G18460,AT1G77120,AT5G46410,AT3G17040,AT2G24100,AT1G58160,AT1G28320,AT5G27730,AT1G36990,AT3G21870,AT3G27300,AT3G03390,AT5G47110,AT2G35380,AT1G19920,AT3G46460,AT1G20380,AT3G19820,AT3G01040,AT3G61130,AT5G66120,AT5G01270,AT3G10130,AT1G06640,AT4G08330,AT4G18200,AT1G50500,AT4G37910,AT2G35810,AT3G14720,AT5G03120,AT2G21470,AT3G09250,AT5G11150,AT2G46020,AT5G24800,AT1G17530,AT1G59820,AT1G04940,AT1G25490,AT5G63000,AT4G00780,AT1G80600,AT3G62600,AT1G26440,AT4G15570,AT5G23080,AT4G32740,ES15,AT3G14100,AT4G15110,AT2G25900,AT1G73490,AT1G25500,AT3G52290,AT5G40230,AT1G71070,AT4G16260,AT4G37250,AT3G49140,AT2G05120,AT5G65750,AT5G41520,AT4G16190,AT1G10690,AT1G51360,AT2G29660,AT1G20110,AT2G15690,AT2G31120,AT1G11680,AT5G42220,AT3G54210,AT1G47380,AT4G17790,AT1G30970,AT3G47620,AT5G06060,AT5G23020,AT5G23240,p919#5,AT3G48210,AT1G33690,AT4G24240,AT5G47480,AT1G55520,AT1G61870,AT5G04040,AT5G38480,AT3G28050,AT2G18030,AT1G52980,AT4G31170,AT1G13380,AT1G78900,AT5G59080,AT5G01970,AT1G61030,AT1G44960,AT3G01800,AT5G17290,AT4G36760,AT4G23480,AT1G76150,AT3G24740,AT4G01560,AT4G39240,AT1G59760,AT2G36390,AT3G07870,AT5G61500,AT1G33230,AT1G64860,AT1G21750,AT3G20380,AT2G40080,AT1G77220,AT1G51710,AT2G37970,AT5G08160,AT1G70510,AT5G53850,AT1G55280,AT3G54580,AT5G24760,AT4G27720,CI0005,P1941,AT4G39090,AT2G28790,AT3G08680,AT2G30260,AT2G34170,AT2G27500,AT4G28640,AT4G23990,AT1G25530,AT3G49360,AT1G14580,AT5G08170,AT5G17170,AT2G02180,AT5G05190,AT2G36790,AT5G16880,AT3G57000,AT1G29660,AT3G25585,AT4G34950,AT3G02720,AT2G03730,AT1G76400,AT4G20280,AT5G66280,AT2G27080,AT5G14250,AT5G15390,AT5G44120,AT5G22350,AT1G42550,AT2G13970,AT4G20330,AT1G19110,AT3G07660,AT4G34050,AT2G39800,AT1G72450,AT4G26320,AT1G76080,AT4G36780,AT4G16070,AT5G01480,AT4G26180,AT1G53380,AT2G39650,AT4G21660,AT4G39080,AT4G19390,AT2G16780,AT3G61240,AT2G19570,AT4G11820,AT4G36830,AT3G01910,AT1G21130,AT4G02930,AT5G35100,AT1G77990,AT5G65630,AT2G45910,AT1G15380,AT1G73990,AT1G06670,AT5G10430,AT1G62800,AT3G59320,AT3G06430,AT5G13410,AT1G16510,AT3G47060,AT5G51430,AT1G23280,AT1G32050,AT1G30720,AT3G13460,AT5G21070,AT4G34030,AT1G20900,AT3G10800,AT3G25540,AT1G15500,AT1G53400,AT1G67480,AT4G12070,AT1G74260,AT2G26300,AT3G18190,AT1G13990,AT4G22670,AT5G66760,AT5G65280,AT1G29150,AT1G79560,AT3G26060,AT5G57660,AT5G01280,AT5G65180,AT1G58180,AT1G12330,AT1G65580,AT4G30170,AT4G15080,AT1G10020,AT1G80560,AT2G40730,AT1G54050,AT5G40200,AT3G07560,AT2G43760,AT1G28140,AT4G38680,AT5G54730,AT5G63840,AT1G03680,AT5G11670,AT4G34630,AT1G11260,AT4G15610,AT1G74680,AT1G54040,AT4G33420,AT1G31430,AT3G01400,AT4G13830,AT4G30060,AT1G10450,AT1G27640,AT5G47660,AT1G28260,AT4G07950,AT5G53970,AT3G54890,AT2G18890,AT5G26340,AT4G26450,AT2G05940,AT2G45010,AT5G42180,AT3G55220,AT3G27610,AT2G33700,AT2G18170,AT5G43310,AT1G78020,AT4G15440,AT5G42000,AT1G51640,AT3G55460,AT5G57625,AT3G15810,AT3G18390,AT2G05510,AT3G06180,AT4G29690,AT4G05150,AT3G57790,AT2G41560,AT1G47870,AT3G57410,AT4G38340,AT5G41350,AT3G14090,AT1G30580,AT1G13110,AT5G15530,AT3G46560,AT1G12270,AT5G27210,AT5G10860,AT1G14140,AT1G71040,AT3G09610,AT4G39860,AT3G01410,AT1G64950,AT3G44110,AT5G59980,AT5G18410,AT3G62220,AT4G37520,AT4G17530,AT5G45160,AT1G74060,AT3G58750,AT2G39970,AT3G60600,AT1G49140,AT3G12150,AT4G28360,AT2G17560,AT4G30350,AT2G31670,AT4G29790,AT3G51390,AT4G18130,AT5G16890,AT3G05920,AT1G49850,AT5G23220,AT4G26130,AT4G01100,AT4G00400,AT4G01960,AT4G35060,AT4G23620,AT5G39660,AT5G55920,AT4G38060,AT3G13410,AT3G25710,AT2G44430,AT4G10070,AT3G28344,AT1G07630,AT3G03120,AT2G24870,AT4G38690,AT5G53530,AT2G17540,AT5G43880,AT4G18030,AT3G47880,AT4G33960,AT5G01600,AT4G27150,AT2G20120,AT5G54960,AT1G48350,AT5G06870,AT2G30860,AT1G05680,AT1G06050,AT4G25830,AT2G45810,AT3G45640,AT5G13330,AT5G53250,AT1G67820,AT5G51120,AT2G02960,AT1G12780,AT4G39400,AT5G65950,AT1G08190,AT5G66400,AT3G29810,AT3G28040,AT5G54580,AT1G78630,AT3G20800,AT5G43580,AT2G01170,AT1G10740,AT3G48070,AT3G13300,AT3G27060,AT3G60130,AT3G13120,AT4G20070,AT5G55990,AT4G36380,AT5G07070,AT4G32690,AT5G39220,AT1G13420,AT5G04130,AT2G31380,AT4G02080,AT2G37410,AT3G12950,AT5G58640,AT2G47940,AT4G26060,AT2G46420,AT4G35040,AT5G22370,AT1G47490,AT1G12550,AT2G47170,AT4G14870,AT4G28260,AT1G02880,AT5G57870,AT3G23800,AT5G49940,AT5G45430,AT1G13580,AT3G55740,AT3G13200,AT5G11730,AT3G54680,AT3G59220,AT1G27200,AT4G36640,AT4G05420,AT2G34780,AT4G18260,AT2G29200,AT3G16850,AT1G50040,AT2G36290,AT1G31850,TLG2A,AT3G43670,AT1G18840,AT4G27580,AT2G39570,AT5G38530,AT1G51630,AT2G45170,AT4G26810,AT4G08920,AT4G15800,AT1G23190,AT2G23350,AT2G37790,AT1G22940,AT1G51310,AT5G61530,AT1G22630,AT2G27450,AT1G67800,AT2G24400,AT1G08470,AT5G40170,AT3G15470,AT5G27640,AT1G02000,AT2G34460,AT3G02360,AT4G17050,AT2G29180,AT3G06470,AT3G23400,AT5G26740,AT1G16170,AT1G51070,AT3G19680,AT1G22710,AT4G27350,AT1G20260,AT5G51890,AT3G13490,AT5G35480,AT3G61070,AT3G12080,AT5G22410,AT1G26630,AT1G15690,AT3G15840,AT3G49680,AT3G47550,AT3G04480,AT5G44580,AT5G05130,AT1G47900,AT2G01880,AT2G14720,AT1G09120,AT4G18930,AT3G07680,AT3G48890,AT1G80300,AT2G36010,AT1G55450,AT4G34180,AT2G23550,AT1G76660,AT1G79160,AT2G18240,AT5G51620,AT3G17600,AT1G72010,AT1G56220,AT1G65180,AT1G52870,AT4G02380,AT5G40450,AT1G19360,AT4G11600,AT2G45800,AT5G65760,AT2G21270,AT5G50740,AT1G33590 SCHEIBLE_TXR1M-MUTANT/WT-REPRESSED_UP Induced expression profiles of genes that are significantly induced (arithmetic mean value >1) or repressed (arithmetic mean value <1) in txr1 mutants compared to wild type plants (TableS1 PubmedID:12897252) AT2G21640,AT2G03760,AT5G54100,AT3G01600,AT2G03130,AT4G27585,AT5G55200,AT3G29185,AT5G43450,AT5G50160,AT3G27780,AT5G56350,AT3G45730,AT4G15760,AT1G17580,AT5G19550,AT4G27210,AT2G36790,AT1G05680,AT5G42060,AT2G15750,AT5G36230,AT3G27770,AT1G70310,AT1G69370,AT1G70560,AT1G80130,AT2G36530,AT5G49560,AT1G52600 SCHEIBLE_TXR1M-MUTANT/WT-REPRESSED_DN Repressed expression profiles of genes that are significantly induced (arithmetic mean value >1) or repressed (arithmetic mean value <1) in txr1 mutants compared to wild type plants (TableS1 PubmedID:12897252) AT2G47480,AT1G22530,AT4G15940,AT5G64570,AT5G49360,AT3G16240,AT1G53750,AT4G19420,AT5G24770,AT2G36620,AT5G14120,AT5G59310,AT4G15210,AT2G43550,AT5G61440,AT1G75750,AT2G02990,AT2G38770,AT5G24240 CARTIEAUX_RHIZOBACTERIA-TREATED/AXENIC_UP Upregulated genes that are differentially expressed in rhizobacteria-treated versus axenic plants (Table1 PubmedID:14535883) AT5G64120,AT2G33830,AT5G56870,AT4G02520,AT5G66720,AT4G30270,AT2G21100,AT5G20230,AT5G38870,AT4G39090,AT1G59870,AT4G02380,AT1G28330,AT5G10860,AT5G20250,AT1G21310,AT1G11260,AT2G39530,AT1G72150,AT5G19530,AT3G10980,AT3G50740,AT1G21110,AT5G06320,AT3G62550,AT5G24490,AT4G12470,AT5G19120,AT5G19230,AT3G56490,AT5G42050,AT5G42530,AT1G02360,AT2G25610,AT4G36730,AT3G01290,AT2G25900,AT2G43680,AT5G06690,AT2G03510 CARTIEAUX_RHIZOBACTERIA-TREATED/AXENIC_DN Downregulated genes that are differentially expressed in rhizobacteria-treated versus axenic plants (Table1 PubmedID:14535883) AT3G28780,AT4G39430,AT3G12300,AT4G39030,AT4G26850,AT5G67030,AT5G49790,AT3G30727,AT4G32440,AT1G77220,AT3G32940,AT5G41340,AT1G45904,AT2G07731,AT3G32990,AT4G38940,AT3G51260,AT3G01500,AT3G47070,AT4G11175,AT4G02110,AT5G48570,AT3G06810,AT3G05890,AT2G39370,AT5G39510,AT1G45261,AT1G03200,AT1G79870,AT1G25390 DITT_48H_INOCULATION-WITH-TUMEFACIENS_UP Arabidopsis genes upregulated 48 h after inoculation with Agrobacterium tumefaciens (Table2 PubmedID:16776300) AT4G34050,AT2G30490,AT5G36925,AT5G64120,AT1G22410,AT5G24760,AT2G43120,AT5G36920,AT1G14870,AT3G03780,AT5G40780,AT1G48850,AT5G39580,AT4G15610,AT4G26220,AT3G13790,AT3G01290,AT1G78380,AT1G02920,AT2G28340,AT1G32100,AT3G21240,AT2G44370,AT4G08410,AT4G30270,AT2G43510,AT3G54580,AT3G58890,AT3G03960,AT5G13420,AT1G52200,AT3G29970,AT3G44780,AT1G78860,AT5G19440,AT5G42350,AT2G22880,AT1G61660,AT3G43190,AT1G51810,AT2G36380,AT5G20960,AT4G18670,AT3G54590,AT1G60730,AT4G30190,AT5G06320,AT4G33870,AT3G46270,AT1G48640,AT1G11820,AT2G42140,AT1G69850,AT5G01210,AT4G11650,AT3G44320,AT3G50590,AT4G38540,AT2G16720,AT2G21490,AT1G65295,AT2G26560,AT1G79180,AT1G78780,AT4G38980,AT5G38900,AT3G01570,AT1G34510,AT1G44940,AT2G22890,AT2G17220,AT1G56250,AT5G12970,AT5G65110,AT5G62070,AT5G59616,AT2G22850,AT2G31570,AT5G59230,AT4G30210,AT4G19360,AT3G21070,AT1G69410,AT1G60680,AT2G01905,AT1G33720,AT5G18900,AT1G06310,AT3G17810,AT3G48000,AT3G58740,AT5G20230,AT3G51430,AT2G17950,AT1G06920,AT2G27190,AT1G69570,AT1G62800,AT4G26690,AT1G06030,AT1G13990,AT4G38220,AT4G11600,AT3G61950,AT2G31865,AT4G01680,AT4G15390,AT1G02205,AT1G55450,AT3G30821,AT5G38130,AT2G32820,AT3G02210,AT4G02760,AT2G32250 DITT_48H_INOCULATION-WITH-TUMEFACIENS_DN Arabidopsis genes downregulated 48 h after inoculation with Agrobacterium tumefaciens (Table3 PubmedID:16776300) AT3G04110,AT1G71170,AT3G03250,AT5G57610,AT1G61410,AT4G38240,AT1G05640,AT5G01620,AT1G30880,AT2G45100,AT1G06770,AT2G47610,AT5G56510,AT1G56070,AT5G26850,AT2G02480,AT3G46520,AT5G23740,AT4G30480,AT5G49530,AT3G56490,AT5G43680,AT1G53210,AT2G14160,AT1G63660,AT2G37500,AT5G16390,AT3G05590,AT5G16130,AT2G36170,AT1G77670,AT3G61110,AT5G67220,AT2G37620,AT3G24020,AT3G02960,AT3G62920,AT2G19730,AT3G53750,AT4G26300,AT4G27600,AT1G76880,AT1G06750,AT3G17730,AT4G17950,AT4G11080,AT4G19390,AT3G15750,AT2G47110,AT1G80410,AT1G10417,AT4G12390,AT5G62300,AT3G45030,AT3G53730,AT3G15000,AT5G57090,AT5G62700,AT4G10450,AT1G48830,AT1G22090,AT1G34030,AT4G18730,AT5G17090,AT5G35360,AT1G31812,AT3G22440,AT5G09500,AT2G27330,AT5G47930,AT5G07090,AT3G49250,AT4G15790,AT3G12030,AT1G08360,AT2G36200,AT1G26740,AT3G02560,AT3G09500,AT1G15370,AT3G12060,AT1G34210,AT3G25140,AT5G65010,AT2G15400,AT2G42740,AT2G20880,AT1G79870,AT2G33370,AT1G43170,AT1G34430,AT3G19080,AT1G26480,AT1G15420,AT3G46560,AT4G28440,AT4G36130,AT1G72370,AT1G04270,AT5G12840,AT3G55630,AT2G22870,AT5G13630,AT1G31350,AT5G10360,AT3G62250,AT3G25600,AT4G29360,AT3G54260,AT5G27770,AT1G35780,AT3G56340,AT5G47530,AT3G43600,AT2G05220,AT5G13850,AT1G51060,AT1G36240,AT1G18540,AT4G07960,AT1G50010,AT4G03170,AT5G61170,AT5G09810,AT5G41685,AT2G37190,AT2G23930,AT2G20890,AT3G27080,AT4G00430,AT2G21860,AT3G53940,AT1G20580,AT1G13380,AT2G29440,AT5G61130,AT4G33865,AT3G44010,AT4G13170,AT1G41830,AT3G11250,AT4G24960,AT5G46430,AT5G45775,AT5G42060,AT5G02960,AT3G04400,AT5G64140,AT2G16600,AT5G59850,AT4G02800,AT4G14320,AT5G28060,AT3G07590,AT3G23390,AT4G23000,AT2G42570,AT4G34870,AT4G15802,AT5G45300,AT1G60030,AT2G27970,AT4G30330,AT4G38660,AT5G48300,AT1G24280,AT5G59870,AT2G25210,AT3G16780,AT2G16830,AT2G44830,AT3G59540,AT5G27120,AT3G21190,AT2G23120,AT1G22880,AT1G41880,AT5G56670,AT2G46890,AT3G21770,AT1G13300,AT3G14310,AT5G01600,AT3G16240,AT4G08685,AT3G08030,AT2G02100,AT2G06850 DITT_AGROBACTERIUM_UP Upregulated by comparison of Agrobacterium (Agro)-regulated genes at 48 h with available Datasets from biotic, abiotic, and hormonal treatments on Arabidopsis (Table4 PubmedID:16776300) AT4G34050,AT2G30490,AT5G64120,AT5G39580,AT1G14870,AT5G40780,AT1G48850,AT4G15610,AT3G13790,AT3G01290,AT1G78380,AT1G02920,AT3G21240,AT2G44370,AT4G30270,AT2G43510,AT1G52200,AT1G78860,AT1G61660,AT5G20960,AT1G11820,AT1G69850,AT5G01210,AT4G11650,AT3G44320,AT4G38540,AT1G78780,AT2G22890,AT2G17220,AT5G12970,AT5G65110,AT2G31570,AT4G30210,AT3G17810,AT5G20230,AT2G27190,AT4G26690,AT1G13990,AT4G11600,AT3G61950,AT2G31865,AT1G02205,AT1G55450,AT2G32250 DITT_AGROBACTERIUM_DN Downregulated by comparison of Agrobacterium (Agro)-regulated genes at 48 h with available Datasets from biotic, abiotic, and hormonal treatments on Arabidopsis (Table4 PubmedID:16776300) AT1G30880,AT3G46520,AT5G16390,AT3G61110,AT4G26300,AT4G27600,AT4G17950,AT4G19390,AT4G12390,AT3G53730,AT5G35360,AT2G27330,AT1G34210,AT2G20880,AT5G13630,AT3G54260,AT1G51060,AT4G07960,AT2G23930,AT2G20890,AT4G00430,AT2G21860,AT2G29440,AT5G61130,AT4G24960,AT2G42570,AT2G27970,AT4G38660,AT5G48300,AT5G59870,AT2G16830,AT2G23120,AT1G22880,AT1G13300,AT3G14310,AT5G01600,AT3G16240,AT2G02100,AT2G06850,AT4G35000 WELLMER_ORGAN_DIFF All organ-expressed genes described in the study (Table S1 PubmedID:15100403) AT3G57690,AT5G14380,AT1G02790,AT3G07820,AT5G26696,AT2G47050,AT1G49490,AT5G59370,AT5G20230,AT4G26260,AT2G46860,AT1G54070,AT1G55560,AT2G45800,AT2G47040,AT2G46210,AT3G07850,AT4G36490,AT1G55570,AT4G25780,AT4G39110,AT4G35010,AT4G02380,AT2G02720,AT2G13350,AT2G02140,AT1G14420,AT2G33420,AT2G05850,AT5G23270,AT4G02250,AT4G34750,AT2G19770,AT4G25590,AT2G23900,AT2G31500,AT2G43230,AT2G26850,AT4G39670,AT2G33100,AT4G03290,AT1G30710,AT2G18470,AT4G29340,AT1G03050,AT2G20320,AT1G01460,AT3G47440,AT2G16730,AT2G38400,AT3G52600,AT4G07960,AT1G15350,AT4G30850,AT2G36660,AT2G35210,AT1G24620,AT2G40990,AT2G39420,AT4G12430,AT2G24370,AT2G07040,AT2G41860,AT1G04700,AT1G49270,AT2G28180,AT1G60240,AT4G39180,AT2G13570,AT2G33270,AT4G33970,AT2G17890,AT2G03410,AT1G12070,AT4G38190,AT1G22730,AT4G15980,AT2G19050,AT4G34440,AT4G10010,AT3G16380,AT1G03920,AT3G09390,AT4G33230,AT2G22860,AT4G38230,AT4G16745,AT4G13240,AT1G51260,AT1G43630,AT4G27110,AT2G41970,AT2G19010,AT4G17690,AT4G18790,AT2G41210,AT4G20160,AT2G13675,AT5G26150,AT1G15380,AT1G23540,AT4G01470,AT1G70430,AT2G33870,AT1G70170,AT4G20780,AT1G04600,AT4G24580,AT2G45610,AT2G37010,AT4G31220,AT4G14780,AT1G79450,AT2G33670,AT5G65110,AT2G25630,AT5G35390,AT2G40180,AT2G30690,AT4G35380,AT1G79250,AT3G10410,AT1G13950,AT4G26470,AT3G28210,AT2G29790,AT4G36640,AT1G08730,AT1G48900,AT2G29040,AT2G47770,AT2G30290,AT1G04500,AT3G48010,AT2G20470,AT1G24400,AT1G23800,AT4G02660,AT2G21540,AT2G03980,AT4G12960,AT4G12890,AT4G20890,AT5G44340,AT2G36880,AT1G64740,AT3G02470,AT3G30775,AT3G52000,AT1G67480,AT1G04470,AT3G08580,AT4G26400,AT1G04540,AT2G39700,AT2G34770,AT2G37620,AT4G27960,AT4G17790,AT2G46260,AT3G08730,AT5G44790,AT3G51300,AT5G02380,AT2G46500,AT2G17500,AT2G01450,AT4G20870,AT4G20380,AT1G51200,AT2G18180,AT4G18700,AT3G12110,AT2G07180,AT5G07440,AT4G27070,AT4G37280,AT2G36320,AT2G46170,AT1G75950,AT3G12120,AT1G61860,AT5G58950,AT4G25150,AT2G18280,AT4G27350,AT2G46490,AT2G39770,AT4G27880,AT5G59030,AT4G18640,AT2G02970,AT4G34720,AT2G02810,AT4G17170,AT2G29050,AT1G07600,AT3G20770,AT4G22590,AT2G14750,AT1G11770,AT4G01480,AT2G40710,AT1G66580,AT2G39780,AT4G19120,AT2G38360,AT4G31340,AT4G21810,AT2G34250,AT3G51030,AT4G19200,AT4G39080,AT3G50000,AT3G11900,AT4G25900,AT2G40620,AT2G25880,AT1G12780,AT4G37930,AT1G54290,AT1G23490,AT2G44970,AT4G03110,AT2G47730,AT1G10740,AT2G41110,AT2G16500,AT2G45070,AT3G46520,AT2G37110,AT4G37830,AT2G31350,AT4G02470,AT4G24630,AT1G03610,AT4G26710,AT4G27500,AT3G59920,AT4G26650,AT2G39570,AT1G61770,AT1G54280,AT1G61290,AT1G75630,AT3G48560,AT4G02620,AT2G20860,AT4G23630,AT2G02960,AT5G55850,AT4G31290,AT4G22220,AT4G02570,AT2G41630,AT2G46140,AT2G43790,AT1G56280,AT2G28910,AT4G37760,AT2G02180,AT4G38800,AT1G64980,AT1G49240,AT1G15470,AT2G34690,AT5G56760,AT4G00720,AT2G04410,AT5G58720,AT5G61790,AT4G33440,AT4G35950,AT4G32530,AT4G24920,AT4G01960,AT4G38920,AT2G37980,AT2G19800,AT4G32470,AT2G47490,AT1G09070,AT5G51460,AT2G31830,AT2G28080,AT1G54410,AT3G52560,AT1G76490,AT2G13620,AT5G11770,AT4G17940,AT3G25585,AT5G64920,AT2G31800,AT4G33390,AT2G03120,AT4G10040,AT2G17370,AT1G11890,AT2G17530,AT2G25600,AT5G49890,AT1G55530,AT3G51770,AT5G13490,AT1G03457,AT4G21160,AT1G14320,AT4G30860,AT4G19110,AT4G39090,AT5G41700,AT1G12240,AT2G26800,AT1G24110,AT2G27860,AT1G78940,AT4G30010,AT1G09080,AT5G45350,AT2G16510,AT2G42780,AT4G31420,AT4G27470,AT2G42500,AT1G09180,AT4G17550,AT2G02760,AT4G11150,AT1G60780,AT1G32170,AT2G43170,AT4G27130,AT4G10810,AT3G55380,AT2G01670,AT2G17800,AT5G67490,AT2G24100,AT3G25800,AT1G16240,AT1G04300,AT4G14500,AT4G35890,AT4G38250,AT4G28000,AT5G27150,AT2G19480,AT1G11910,AT4G22330,AT2G23090,AT4G04610,AT5G51400,AT2G23310,AT1G27290,AT2G44090,AT1G08600,AT5G07470,AT2G36900,AT2G43020,AT2G36390,AT2G40420,AT1G23750,AT4G13010,AT2G33470,AT3G51840,AT2G02400,AT4G33140,AT2G01600,AT1G34260,AT3G18780,AT5G44860,AT5G26734,AT2G42680,AT2G45740,AT1G08770,AT1G65430,AT2G23340,AT2G20820,AT1G24180,AT3G47800,AT3G11410,AT4G32060,AT2G21480,AT2G28640,AT4G25230,AT4G03030,AT1G29750,AT1G05020,AT2G28320,AT4G27840,AT1G05380,AT2G25490,AT4G11050,AT2G24765,AT4G26850,AT2G37490,AT4G35500,AT1G54320,AT4G19640,AT2G03470,AT4G26930,AT3G01120,AT4G24160,AT4G26970,AT2G46800,AT5G01600,AT2G20440,AT2G28840,AT1G04160,AT4G27600,AT4G23710,AT1G08510,AT4G20150,AT4G28770,AT1G49340,AT5G25880,AT1G09330,AT2G14910,AT4G17640,AT2G43040,AT4G35940,AT3G44110,AT2G44350,AT4G28480,AT1G70330,AT4G00110,AT4G00860,AT1G21660,AT4G21326,AT1G08190,AT2G27050,AT4G10360,AT2G43900,AT1G04140,AT2G35630,AT4G23490,AT2G25610,AT2G25110,AT2G45820,AT5G18620,AT1G77180,AT1G11990,AT4G35090,AT4G38510,AT1G67350,AT3G01540,AT2G23660,AT3G46060,AT4G00810,AT5G59300,AT4G34100,AT2G38270,AT4G04910,AT4G09720,AT4G12040,AT1G45145,AT2G20840,AT1G54740,AT2G21860,AT2G03060,AT4G26570,AT3G05530,AT2G34440,AT2G20670,AT1G24350,AT4G00300,AT1G55520,AT2G29980,AT5G12140,AT2G37760,AT2G35190,AT2G21600,AT1G05630,AT2G22010,AT5G56290,AT2G38410,AT5G50850,AT4G32940,AT2G44450,AT3G26690,AT1G61780,AT1G11650,AT4G29130,AT1G59820,AT4G28540,AT1G24330,AT1G04290,AT2G46540,AT1G70420,AT2G28590,AT1G70160,AT2G03270,AT2G47600,AT5G19280,AT1G10080,AT2G33320,AT1G60610,AT3G23610,AT4G22780,AT1G15310,AT5G20620,AT5G37780,AT4G20070,AT3G02830,AT1G02140,AT2G30360,AT4G26410,AT4G27370,AT3G48140,AT1G10590,AT1G21630,AT3G13920,AT4G09830,AT3G28730,AT2G19400,AT2G05630,AT2G44620,AT2G22500,AT4G29950,AT2G39130,AT2G20930,AT2G17440,AT4G36690,AT1G17880,AT2G37410,AT2G07360,AT1G54710,AT1G61140,AT2G22560,AT1G03140,AT4G14430,AT4G26100,AT5G42980,AT2G29410,AT1G17470,AT3G54110,AT4G14410,AT4G32760,AT1G08830,AT2G47960,AT2G46505,AT2G20830,AT1G30810,AT1G34190,AT1G21750,AT4G03260,AT3G52720,AT2G02510,AT1G05360,AT4G34630,AT1G49300,AT2G04520,AT4G02900,AT1G03060,AT2G15240,AT1G09940,AT2G02090,AT1G54830,AT2G47650,AT3G58160,AT1G35670,AT1G26850,AT4G34640,AT2G36630,AT2G30410,AT5G60390,AT4G14230,AT1G77250,AT5G18830,AT4G35830,AT4G16500,AT2G22690,AT1G06750,AT2G41980,AT4G34450,AT1G61620,AT2G28370,AT4G33010,AT2G41740,AT5G26820,AT4G22750,AT5G42940,AT4G08590,AT5G26940,AT4G24220,AT2G39650,AT2G45490,AT5G66850,AT1G12370,AT1G10170,AT2G46390,AT2G44660,AT4G36210,AT2G01330,AT2G33040,AT2G04900,AT1G09140,AT2G21870,AT1G79340,AT3G19760,AT3G09840,AT4G31080,AT4G10590,AT1G62660,AT1G10410,AT4G25030,AT2G22740,AT2G23120,AT5G65890,AT2G17990,AT2G30050,AT4G11220,AT4G02730,AT2G21160,AT1G22750,AT2G37480,AT4G17650,AT1G15490,AT2G47330,AT2G35680,AT2G42210,AT3G24800,AT2G31440,AT2G02050,AT4G02580,AT4G02880,AT4G01290,AT4G31430,AT2G42380,AT1G55510,AT3G52220,AT1G10070,AT5G13820,AT2G21430,AT2G32040,AT5G54280,AT5G43320,AT1G21760,AT4G33410,AT3G51990,AT1G45050,AT2G47700,AT4G36800,AT1G68370,AT1G25490,AT4G24740,AT2G38910,AT2G20730,AT4G35450,AT2G44610,AT1G16210,AT1G54270,AT2G13290,AT3G54850,AT2G20760,AT2G22720,AT1G22650,AT4G01850,AT3G08720,AT3G15410,AT1G03550,AT4G22310,AT4G11380,AT4G36630,AT1G03930,AT2G04630,AT1G22840,AT2G32090,AT1G15370,AT1G54130,AT2G30530,AT2G29890,AT3G51870,AT1G59890,AT4G25650,AT5G42970,AT2G21130,AT1G72770,AT1G50640,AT2G28540,AT1G55680,AT3G02040,AT4G39230,AT2G42080,AT3G51820,AT1G07890,AT4G21790,AT3G48070,AT4G38600,AT4G30060,AT1G79850,AT1G68000,AT4G38570,AT3G55400,AT2G42520,AT1G54460,AT1G65220,AT5G08160,AT5G65930,AT5G66760,AT2G37970,AT4G36440,AT2G31490,AT3G43810,AT1G77300,AT2G33390,AT4G37180,AT2G39990,AT4G16480,AT2G23320,AT2G41440,AT4G10140,AT4G22360,AT4G39240,AT4G27000,AT2G30970,AT1G47500,AT5G13280,AT2G18840,AT1G02080,AT1G14020,AT2G06530,AT1G54115,AT1G05120,AT3G46820,AT4G38470,AT2G33150,AT4G01660,AT1G11660,AT2G17360,AT1G78920,AT2G42880,AT1G71840,AT2G24240,AT2G03480,AT2G42030,AT3G54930,AT1G78900,AT3G05840,AT3G51630,AT2G28430,AT1G03250,AT4G39680,AT1G10230,AT2G32910,AT2G35510,AT2G19540,AT4G32130,AT2G44525,AT3G53610,AT1G47420,AT4G22850,AT2G16430,AT1G10950,AT5G64070,AT3G51880,AT1G09850,AT4G26080,AT3G10660,AT2G03820,AT2G01970,AT4G30940,AT1G29330,AT2G32970,AT2G36530,AT4G14110,AT2G21520,AT1G59830,AT4G31750,AT2G18730,AT4G38940,AT2G25730,AT2G20360,AT2G01620,AT4G04320,AT2G41050,AT2G24420,AT1G15270,AT5G44800,AT4G39860,AT4G32600,AT2G38460,AT2G21390,AT2G20920,AT2G41840,AT2G20420,AT1G26830,AT4G13980,AT4G35650,AT5G26030,AT1G13980,AT4G09570,AT2G44870,AT2G14490,AT2G17290,AT2G13940,AT5G03470,AT2G02230,AT4G28990,AT3G52030,AT1G10720,AT1G30620,AT1G09270,AT1G61700,AT2G29020,AT2G13370,AT3G02520,AT2G18160,AT1G79350,AT1G79520,AT1G03960,AT2G36590,AT2G30320,AT4G12990,AT4G35800,AT4G02080,AT2G38670,AT2G42010,AT4G34230,AT1G03210,AT4G12230,AT2G27720,AT2G39820,AT4G22910,AT2G01490,AT2G41960,AT4G34150,AT4G28050,AT4G33630,AT2G47580,AT2G18680,AT1G08130,AT4G28020,AT2G18440,AT1G16330,AT2G45330,AT5G27840,AT4G30210,AT4G13190,AT4G18990,AT1G62020,AT2G26140,AT2G20530,AT2G31670,AT2G27580,AT4G11720,AT3G46930,AT4G01070,AT1G11840,AT1G19090,AT2G24940,AT2G37250,AT2G15290,AT4G22820,AT3G19930,AT4G12030,AT4G09320,AT2G35650,AT3G51895,AT3G55610,AT4G37870,AT1G14200,AT1G21700,AT2G41160,AT4G38240,AT2G47760,AT2G40730,AT4G26270,AT2G22290,AT2G37540,AT2G47690,AT3G26900,AT4G33680,AT5G39950,AT2G36310,AT2G18790,AT1G71380,AT5G53350,AT3G56190,AT1G13450,AT1G31070,AT2G27350,AT4G00550,AT2G25790,AT2G32670,AT5G59430,AT1G04430,AT2G27260,AT1G16310,AT4G37410,AT1G62200,AT2G04550,AT4G14310,AT2G36290,AT1G58290,AT2G01290,AT2G44750,AT2G25670,AT4G25890,AT4G17530,AT1G50430,AT5G10360,AT2G01220,AT2G46830,AT2G36170,AT2G19760,AT4G35560,AT4G26330,AT2G27710,AT2G26920,AT1G15140,AT1G15500,AT2G30800,AT1G17745,AT4G10440,AT2G32260,AT2G43150,AT1G04610,AT2G27030,AT2G37840,AT1G03750,AT2G36400,AT2G33700,AT5G06910,AT1G80830,AT2G40880,AT2G29180,AT2G18260,AT1G09920,AT4G25210,AT1G49380,AT2G16460,AT2G28740,AT4G21350,AT3G22460,AT2G28980,AT4G21720,AT2G25940,AT1G65170,AT4G33420,AT4G19440 WELLMER_ORGAN_FLOWER-CDNA_DIFF The organ-expressed genes identified with the flower-specific cDNA array are listed (Table S7 PubmedID:15100403) AT1G01280,AT1G01780,AT1G02790,AT1G05480,AT1G06260,AT1G11190,AT1G14420,AT1G15380,AT1G16290,AT1G18280,AT1G20130,AT1G23240,AT1G24520,AT1G24620,AT1G28375,AT1G29140,AT1G30350,AT1G30795,AT1G33430,AT1G35310,AT1G44970,AT1G47980,AT1G52680,AT1G54070,AT1G54860,AT1G55020,AT1G55560,AT1G55570,AT1G61563,AT1G62940,AT1G63180,AT1G64660,AT1G66850,AT1G67290,AT1G67990,AT1G69180,AT1G69940,AT1G70720,AT1G71770,AT1G75870,AT1G75910,AT1G75920,AT1G78460,AT1G78780,AT1G79910,AT1G80660,AT2G02850,AT2G03200,AT2G03740,AT2G03850,AT2G05850,AT2G07040,AT2G17950,AT2G19110,AT2G19770,AT2G20320,AT2G21140,AT2G23170,AT2G24450,AT2G26850,AT2G27180,AT2G31980,AT2G34870,AT2G36190,AT2G38080,AT2G38530,AT2G41800,AT2G42830,AT2G43230,AT2G45800,AT2G47030,AT2G47040,AT2G47050,AT3G01240,AT3G01250,AT3G01270,AT3G01700,AT3G03430,AT3G05610,AT3G07820,AT3G07850,AT3G11980,AT3G13390,AT3G13400,AT3G15400,AT3G15540,AT3G15900,AT3G17980,AT3G19020,AT3G20210,AT3G23130,AT3G23840,AT3G26125,AT3G26860,AT3G28750,AT3G28780,AT3G28820,AT3G28840,AT3G45010,AT3G47340,AT3G47870,AT3G48690,AT3G50570,AT3G51590,AT3G52160,AT3G56180,AT3G57390,AT3G57620,AT3G57690,AT3G58780,AT3G59530,AT3G62230,AT3G62710,AT4G04460,AT4G09960,AT4G12890,AT4G13560,AT4G14080,AT4G14130,AT4G16745,AT4G20050,AT4G20420,AT4G23690,AT4G24380,AT4G25040,AT4G25780,AT4G26260,AT4G27580,AT4G28395,AT4G30140,AT4G35010,AT4G37900,AT5G04180,AT5G07230,AT5G07410,AT5G07430,AT5G07510,AT5G07530,AT5G07540,AT5G07550,AT5G07560,AT5G07600,AT5G08540,AT5G09550,AT5G09730,AT5G12000,AT5G12950,AT5G13380,AT5G14380,AT5G15140,AT5G16920,AT5G16960,AT5G19580,AT5G20710,AT5G26696,AT5G35794,AT5G38760,AT5G39400,AT5G39880,AT5G40260,AT5G43300,AT5G44400,AT5G44540,AT5G45880,AT5G47000,AT5G48140,AT5G48210,AT5G53190,AT5G53820,AT5G61430,AT5G62080,AT5G62750,AT5G65110,AT5G65870,AT1G35666,AT1G44254,AT1G60740,AT1G61110,AT1G61566,AT1G68875,AT1G75930,AT2G28355,AT3G14040,AT3G20865,AT3G26110,AT3G61160,AT5G18910,AT5G20790,AT5G26729,AT5G40730,AT5G45775,AT5G51230,AT1G02930,AT1G03170,AT1G07750,AT1G12570,AT1G23570,AT1G25230,AT1G28270,AT1G41880,AT1G48750,AT1G48900,AT1G57750,AT1G65970,AT1G75940,AT1G78490,AT2G02780,AT2G20340,AT2G33330,AT3G09390,AT3G15500,AT3G20580,AT3G21390,AT3G25050,AT3G26140,AT3G27420,AT3G28790,AT3G28980,AT3G49540,AT3G57340,AT3G61070,AT3G62170,AT3G62700,AT4G02650,AT4G05420,AT4G08670,AT4G12700,AT4G12960,AT4G15530,AT4G20370,AT4G22990,AT4G30270,AT4G33150,AT4G34580,AT5G06860,AT5G14780,AT5G15960,AT5G20250,AT5G23550,AT5G45950,AT5G53120,AT5G59120,AT5G59310,AT5G59320,AT5G59370,AT5G60910,AT5G61720,AT3G23860 WELLMER_ORGAN_OLIGONUCLEOTIDE_DIFF The organ-expressed genes identified with the oligonucleotide array are listed (Table S7 PubmedID:15100403) AT1G01120,AT1G02400,AT1G02530,AT1G04250,AT1G05450,AT1G05480,AT1G06080,AT1G06520,AT1G06920,AT1G09510,AT1G10550,AT1G11540,AT1G12670,AT1G12890,AT1G14460,AT1G20350,AT1G23420,AT1G23760,AT1G24540,AT1G25330,AT1G28710,AT1G30795,AT1G30840,AT1G33170,AT1G34180,AT1G35730,AT1G35860,AT1G36340,AT1G44970,AT1G45226,AT1G47480,AT1G47510,AT1G52660,AT1G53130,AT1G53470,AT1G55020,AT1G56710,AT1G62280,AT1G63210,AT1G64340,AT1G65500,AT1G69180,AT1G71691,AT1G72110,AT1G72200,AT1G72290,AT1G73830,AT1G75040,AT1G75050,AT1G75890,AT1G76750,AT1G78780,AT2G02010,AT2G02490,AT2G02850,AT2G03290,AT2G03980,AT2G06090,AT2G12480,AT2G14900,AT2G17000,AT2G21450,AT2G21540,AT2G21650,AT2G21655,AT2G23010,AT2G24620,AT2G25540,AT2G26440,AT2G27880,AT2G29350,AT2G29995,AT2G30090,AT2G33750,AT2G33850,AT2G34870,AT2G35250,AT2G35310,AT2G36890,AT2G37210,AT2G38530,AT2G39350,AT2G41700,AT2G41800,AT2G42410,AT2G42830,AT2G42930,AT2G44080,AT2G44470,AT2G46150,AT2G46960,AT3G02940,AT3G03670,AT3G04540,AT3G09950,AT3G10560,AT3G10720,AT3G10780,AT3G11600,AT3G11990,AT3G12000,AT3G13380,AT3G14520,AT3G14530,AT3G16650,AT3G17010,AT3G17080,AT3G17150,AT3G17225,AT3G18610,AT3G20210,AT3G20470,AT3G20520,AT3G21040,AT3G21500,AT3G22240,AT3G23130,AT3G24510,AT3G43960,AT3G46080,AT3G46770,AT3G48180,AT3G48690,AT3G49270,AT3G51860,AT3G53040,AT3G55640,AT3G56610,AT3G58780,AT3G59030,AT3G59220,AT3G59850,AT3G60160,AT3G61840,AT4G00910,AT4G00920,AT4G02810,AT4G04220,AT4G09960,AT4G10640,AT4G11290,AT4G12870,AT4G12890,AT4G13261,AT4G14130,AT4G14560,AT4G15160,AT4G17505,AT4G18170,AT4G18540,AT4G19690,AT4G19810,AT4G21480,AT4G21630,AT4G21850,AT4G22470,AT4G22490,AT4G22540,AT4G23010,AT4G23690,AT4G24040,AT4G26150,AT4G26280,AT4G26590,AT4G30280,AT4G30590,AT4G32170,AT4G34138,AT4G34250,AT4G35720,AT4G36110,AT4G36380,AT4G36670,AT4G36770,AT4G37050,AT4G37250,AT4G37400,AT4G38000,AT4G38850,AT5G01040,AT5G02540,AT5G07120,AT5G07280,AT5G09730,AT5G11360,AT5G11400,AT5G11950,AT5G14000,AT5G14180,AT5G14190,AT5G15720,AT5G17820,AT5G18090,AT5G20330,AT5G20340,AT5G22460,AT5G22960,AT5G22970,AT5G23260,AT5G25970,AT5G26220,AT5G37300,AT5G38900,AT5G39090,AT5G42230,AT5G42280,AT5G44480,AT5G44635,AT5G44690,AT5G45910,AT5G47150,AT5G47590,AT5G47740,AT5G49180,AT5G50200,AT5G51480,AT5G51810,AT5G52320,AT5G53110,AT5G53320,AT5G53710,AT5G53720,AT5G54850,AT5G56490,AT5G56510,AT5G57240,AT5G57500,AT5G57780,AT5G58400,AT5G58660,AT5G58780,AT5G58782,AT5G59090,AT5G59810,AT5G59820,AT5G60000,AT5G60140,AT5G60380,AT5G61710,AT5G61740,AT5G62150,AT5G62970,AT5G64110,AT5G64870,AT5G65300,AT5G67110,AT5G67340,AT1G35310,AT1G57990,AT1G59406,AT1G61680,AT1G70720,AT1G80240,AT2G23620,AT2G34340,AT3G23470,AT3G48390,AT3G53300,AT4G10240,AT4G37800,AT5G02580,AT5G11420,AT1G22370,AT1G64370,AT1G69120,AT1G74340,AT1G74670,AT1G75750,AT2G20870,AT3G48360,AT4G15620,AT4G15660,AT5G13620,AT5G58770,AT1G01280,AT1G01310,AT1G01460,AT1G01750,AT1G01780,AT1G01980,AT1G02000,AT1G02010,AT1G02510,AT1G02790,AT1G02900,AT1G03050,AT1G03070,AT1G03620,AT1G03850,AT1G03920,AT1G04450,AT1G04500,AT1G04600,AT1G04700,AT1G04880,AT1G04890,AT1G04920,AT1G05290,AT1G05577,AT1G05580,AT1G06170,AT1G06250,AT1G06260,AT1G06280,AT1G06970,AT1G06990,AT1G07330,AT1G07476,AT1G07540,AT1G07725,AT1G08150,AT1G08670,AT1G08730,AT1G09030,AT1G09610,AT1G10385,AT1G10680,AT1G11170,AT1G11190,AT1G11250,AT1G12070,AT1G12600,AT1G13130,AT1G13140,AT1G13150,AT1G13670,AT1G13890,AT1G13950,AT1G13970,AT1G13990,AT1G14420,AT1G14860,AT1G15350,AT1G15380,AT1G15415,AT1G15460,AT1G16110,AT1G16290,AT1G16760,AT1G17540,AT1G17710,AT1G17950,AT1G18280,AT1G18520,AT1G18530,AT1G18960,AT1G18990,AT1G19230,AT1G19780,AT1G20080,AT1G20120,AT1G20130,AT1G20150,AT1G20440,AT1G20925,AT1G21740,AT1G22100,AT1G22110,AT1G22130,AT1G22150,AT1G22730,AT1G22760,AT1G23200,AT1G23240,AT1G23350,AT1G23520,AT1G23540,AT1G23610,AT1G23660,AT1G23690,AT1G23730,AT1G23800,AT1G23840,AT1G24400,AT1G24520,AT1G24600,AT1G24620,AT1G24650,AT1G25240,AT1G26320,AT1G26610,AT1G26710,AT1G26820,AT1G27260,AT1G27710,AT1G28130,AT1G28375,AT1G28430,AT1G28470,AT1G28550,AT1G28700,AT1G29010,AT1G29140,AT1G29860,AT1G30020,AT1G30050,AT1G30350,AT1G30710,AT1G31210,AT1G31740,AT1G31750,AT1G32120,AT1G32250,AT1G32450,AT1G33430,AT1G33700,AT1G35490,AT1G36600,AT1G37058,AT1G42560,AT1G43630,AT1G44120,AT1G44160,AT1G44350,AT1G44478,AT1G44542,AT1G44800,AT1G47600,AT1G47980,AT1G48020,AT1G48470,AT1G48530,AT1G48590,AT1G48940,AT1G49160,AT1G49270,AT1G49290,AT1G49330,AT1G49490,AT1G50310,AT1G50610,AT1G50690,AT1G50820,AT1G50990,AT1G51210,AT1G51240,AT1G51250,AT1G51260,AT1G51410,AT1G51420,AT1G51480,AT1G51490,AT1G52240,AT1G52570,AT1G52680,AT1G52830,AT1G52890,AT1G53270,AT1G53720,AT1G54070,AT1G54240,AT1G54560,AT1G54620,AT1G54860,AT1G54870,AT1G54940,AT1G55560,AT1G55570,AT1G56360,AT1G56440,AT1G56630,AT1G57550,AT1G58120,AT1G58210,AT1G60240,AT1G60250,AT1G60410,AT1G60570,AT1G60760,AT1G61080,AT1G61563,AT1G61590,AT1G61630,AT1G62270,AT1G62370,AT1G62450,AT1G62940,AT1G63060,AT1G63180,AT1G63930,AT1G64110,AT1G64300,AT1G64320,AT1G64480,AT1G64660,AT1G64670,AT1G65160,AT1G66210,AT1G66850,AT1G67160,AT1G67290,AT1G67540,AT1G67550,AT1G67623,AT1G67810,AT1G67920,AT1G67980,AT1G67990,AT1G68090,AT1G68110,AT1G68610,AT1G68750,AT1G69030,AT1G69350,AT1G69500,AT1G69540,AT1G69940,AT1G70170,AT1G70430,AT1G70540,AT1G70630,AT1G70640,AT1G70980,AT1G71680,AT1G71770,AT1G71880,AT1G72230,AT1G72280,AT1G72330,AT1G72460,AT1G72850,AT1G72960,AT1G73630,AT1G73890,AT1G74000,AT1G74020,AT1G74130,AT1G74540,AT1G74550,AT1G74870,AT1G75030,AT1G75160,AT1G75450,AT1G75790,AT1G75870,AT1G75910,AT1G75920,AT1G77730,AT1G77980,AT1G78000,AT1G78140,AT1G78160,AT1G78460,AT1G79180,AT1G79250,AT1G79400,AT1G79450,AT1G79640,AT1G79800,AT1G79860,AT1G79910,AT1G80470,AT1G80660,AT1G80850,AT2G02140,AT2G02720,AT2G02990,AT2G03170,AT2G03200,AT2G03250,AT2G03410,AT2G03740,AT2G03830,AT2G04020,AT2G04220,AT2G04460,AT2G05850,AT2G07040,AT2G07560,AT2G10970,AT2G11480,AT2G13350,AT2G13570,AT2G13675,AT2G16030,AT2G16450,AT2G16730,AT2G16750,AT2G16910,AT2G16980,AT2G17890,AT2G17950,AT2G18080,AT2G18130,AT2G18340,AT2G18420,AT2G18460,AT2G18470,AT2G18480,AT2G19000,AT2G19010,AT2G19040,AT2G19050,AT2G19070,AT2G19110,AT2G19500,AT2G19770,AT2G20320,AT2G20430,AT2G20470,AT2G21490,AT2G21720,AT2G21990,AT2G22180,AT2G22860,AT2G22950,AT2G23170,AT2G23800,AT2G23900,AT2G23970,AT2G24370,AT2G24450,AT2G25460,AT2G25630,AT2G25890,AT2G26410,AT2G26450,AT2G26490,AT2G26850,AT2G27000,AT2G27180,AT2G27670,AT2G28110,AT2G28180,AT2G28680,AT2G29040,AT2G29460,AT2G29600,AT2G29790,AT2G29800,AT2G29940,AT2G30080,AT2G30290,AT2G30630,AT2G30690,AT2G31210,AT2G31470,AT2G31500,AT2G31620,AT2G31760,AT2G32150,AT2G32360,AT2G32460,AT2G32890,AT2G33100,AT2G33190,AT2G33270,AT2G33420,AT2G33460,AT2G33670,AT2G33690,AT2G33870,AT2G34600,AT2G35090,AT2G35210,AT2G35300,AT2G35420,AT2G36020,AT2G36180,AT2G36190,AT2G36660,AT2G37010,AT2G37280,AT2G37360,AT2G37370,AT2G37750,AT2G38010,AT2G38080,AT2G38240,AT2G38500,AT2G38920,AT2G38940,AT2G39420,AT2G40180,AT2G40460,AT2G40670,AT2G40680,AT2G40850,AT2G40990,AT2G41040,AT2G41210,AT2G41850,AT2G41860,AT2G41970,AT2G42140,AT2G43220,AT2G43230,AT2G43620,AT2G44560,AT2G45040,AT2G45130,AT2G45610,AT2G45750,AT2G45800,AT2G46210,AT2G46360,AT2G46370,AT2G46860,AT2G46880,AT2G46950,AT2G47030,AT2G47040,AT2G47050,AT2G47340,AT2G47770,AT3G01020,AT3G01230,AT3G01240,AT3G01250,AT3G01270,AT3G01620,AT3G01630,AT3G01700,AT3G02030,AT3G02480,AT3G02810,AT3G03080,AT3G03410,AT3G03430,AT3G03510,AT3G03540,AT3G03650,AT3G03760,AT3G03800,AT3G03900,AT3G03910,AT3G04360,AT3G04620,AT3G04690,AT3G04700,AT3G05140,AT3G05150,AT3G05610,AT3G05820,AT3G05930,AT3G05960,AT3G06100,AT3G06260,AT3G06420,AT3G06490,AT3G06830,AT3G07070,AT3G07120,AT3G07450,AT3G07620,AT3G07700,AT3G07820,AT3G07830,AT3G07840,AT3G07850,AT3G07920,AT3G07960,AT3G08560,AT3G09530,AT3G09550,AT3G09590,AT3G09930,AT3G10100,AT3G10410,AT3G10460,AT3G10470,AT3G10580,AT3G10590,AT3G10890,AT3G11430,AT3G11690,AT3G11740,AT3G11930,AT3G11980,AT3G12685,AT3G12860,AT3G13220,AT3G13227,AT3G13229,AT3G13390,AT3G13400,AT3G13600,AT3G13610,AT3G13890,AT3G13900,AT3G15280,AT3G15400,AT3G15510,AT3G15540,AT3G15740,AT3G15830,AT3G15900,AT3G16040,AT3G16380,AT3G16580,AT3G16920,AT3G17060,AT3G17630,AT3G17660,AT3G17720,AT3G17760,AT3G17980,AT3G18350,AT3G18360,AT3G18660,AT3G18810,AT3G19020,AT3G19090,AT3G19310,AT3G19580,AT3G20070,AT3G20190,AT3G20220,AT3G20450,AT3G20530,AT3G20990,AT3G21170,AT3G21180,AT3G21320,AT3G21570,AT3G21700,AT3G21940,AT3G21970,AT3G21980,AT3G22020,AT3G22360,AT3G22740,AT3G22750,AT3G23060,AT3G23270,AT3G23310,AT3G23380,AT3G23770,AT3G23840,AT3G24600,AT3G24620,AT3G24720,AT3G25165,AT3G25260,AT3G25930,AT3G26125,AT3G26790,AT3G26860,AT3G26870,AT3G26880,AT3G26930,AT3G28150,AT3G28630,AT3G28750,AT3G28780,AT3G28810,AT3G28820,AT3G28830,AT3G28840,AT3G29050,AT3G29060,AT3G29070,AT3G30280,AT3G32896,AT3G42110,AT3G42640,AT3G42850,AT3G42880,AT3G42950,AT3G42960,AT3G43120,AT3G43630,AT3G43660,AT3G43860,AT3G44040,AT3G45010,AT3G45070,AT3G45080,AT3G45280,AT3G45480,AT3G46720,AT3G46750,AT3G47340,AT3G47440,AT3G47660,AT3G47870,AT3G48010,AT3G48130,AT3G48960,AT3G50220,AT3G50510,AT3G50570,AT3G50580,AT3G50970,AT3G51000,AT3G51070,AT3G51190,AT3G51490,AT3G51590,AT3G51690,AT3G52010,AT3G52080,AT3G52130,AT3G52160,AT3G52460,AT3G52600,AT3G52620,AT3G53070,AT3G53080,AT3G53480,AT3G53510,AT3G53600,AT3G53720,AT3G54700,AT3G54800,AT3G55100,AT3G55180,AT3G55190,AT3G55570,AT3G55780,AT3G55890,AT3G56180,AT3G56230,AT3G57140,AT3G57390,AT3G57620,AT3G57690,AT3G58240,AT3G58260,AT3G58290,AT3G58310,AT3G58360,AT3G58370,AT3G58480,AT3G58960,AT3G59480,AT3G59510,AT3G59530,AT3G60330,AT3G60570,AT3G60710,AT3G60780,AT3G60920,AT3G61170,AT3G61230,AT3G61270,AT3G61340,AT3G61760,AT3G62230,AT3G62290,AT3G62640,AT3G62710,AT4G01140,AT4G01230,AT4G01470,AT4G02140,AT4G02250,AT4G02280,AT4G02380,AT4G02660,AT4G03220,AT4G03290,AT4G03320,AT4G03620,AT4G03730,AT4G04030,AT4G04250,AT4G04460,AT4G04930,AT4G04980,AT4G05120,AT4G05230,AT4G05540,AT4G05570,AT4G07320,AT4G07960,AT4G08290,AT4G08550,AT4G08630,AT4G09090,AT4G09950,AT4G10010,AT4G10230,AT4G10260,AT4G10850,AT4G11030,AT4G11760,AT4G11810,AT4G12430,AT4G12860,AT4G13240,AT4G13450,AT4G13560,AT4G13960,AT4G14080,AT4G14290,AT4G14780,AT4G15250,AT4G15480,AT4G15980,AT4G16160,AT4G16745,AT4G17690,AT4G18190,AT4G18790,AT4G18920,AT4G19620,AT4G19960,AT4G20050,AT4G20160,AT4G20420,AT4G20450,AT4G20460,AT4G20680,AT4G20780,AT4G21120,AT4G21490,AT4G21900,AT4G22080,AT4G22640,AT4G22680,AT4G22790,AT4G22960,AT4G23660,AT4G23900,AT4G24380,AT4G24430,AT4G24580,AT4G24640,AT4G24890,AT4G25010,AT4G25040,AT4G25590,AT4G25780,AT4G25950,AT4G26260,AT4G26390,AT4G26440,AT4G26470,AT4G26730,AT4G26830,AT4G27110,AT4G27580,AT4G28090,AT4G28395,AT4G28500,AT4G28700,AT4G29250,AT4G29340,AT4G29460,AT4G29470,AT4G29550,AT4G29880,AT4G29980,AT4G30140,AT4G30170,AT4G30290,AT4G30770,AT4G30850,AT4G31220,AT4G31330,AT4G31370,AT4G32510,AT4G33230,AT4G33340,AT4G33970,AT4G34135,AT4G34210,AT4G34380,AT4G34440,AT4G34510,AT4G34750,AT4G35010,AT4G35180,AT4G35380,AT4G35420,AT4G35640,AT4G35670,AT4G36350,AT4G36490,AT4G36600,AT4G36640,AT4G36880,AT4G37420,AT4G37840,AT4G37900,AT4G38190,AT4G38230,AT4G38310,AT4G38390,AT4G38590,AT4G39110,AT4G39130,AT4G39180,AT4G39610,AT4G39670,AT4G40020,AT5G01060,AT5G02150,AT5G02570,AT5G03210,AT5G03250,AT5G03590,AT5G03620,AT5G03690,AT5G03810,AT5G03820,AT5G03960,AT5G04160,AT5G04180,AT5G05070,AT5G05720,AT5G06330,AT5G06840,AT5G07010,AT5G07230,AT5G07410,AT5G07420,AT5G07430,AT5G07510,AT5G07520,AT5G07540,AT5G07550,AT5G07560,AT5G07600,AT5G08030,AT5G08480,AT5G08540,AT5G09430,AT5G09480,AT5G09500,AT5G09550,AT5G09570,AT5G09910,AT5G10140,AT5G10260,AT5G10650,AT5G11440,AT5G12000,AT5G12180,AT5G12950,AT5G12960,AT5G13150,AT5G13350,AT5G13380,AT5G13580,AT5G13600,AT5G13700,AT5G13940,AT5G13990,AT5G14380,AT5G14480,AT5G14670,AT5G14870,AT5G14890,AT5G15040,AT5G15110,AT5G15140,AT5G15190,AT5G15430,AT5G15600,AT5G16090,AT5G16440,AT5G16460,AT5G16770,AT5G16920,AT5G16960,AT5G17480,AT5G17500,AT5G17590,AT5G19580,AT5G19600,AT5G20230,AT5G20410,AT5G20710,AT5G23030,AT5G23160,AT5G23270,AT5G23960,AT5G24090,AT5G24790,AT5G26060,AT5G26150,AT5G26320,AT5G26696,AT5G35090,AT5G35110,AT5G35390,AT5G35794,AT5G36150,AT5G36260,AT5G37060,AT5G37810,AT5G38070,AT5G38090,AT5G38440,AT5G38450,AT5G38710,AT5G38760,AT5G39310,AT5G39400,AT5G39420,AT5G39820,AT5G39870,AT5G39880,AT5G39910,AT5G40260,AT5G40620,AT5G40645,AT5G40720,AT5G40860,AT5G41090,AT5G41130,AT5G41390,AT5G41780,AT5G41890,AT5G42170,AT5G42260,AT5G42340,AT5G42490,AT5G43300,AT5G43330,AT5G43340,AT5G43580,AT5G44300,AT5G44330,AT5G44400,AT5G44540,AT5G44550,AT5G44700,AT5G44980,AT5G45810,AT5G45820,AT5G45840,AT5G45880,AT5G46050,AT5G46200,AT5G46230,AT5G46240,AT5G46650,AT5G46770,AT5G46940,AT5G46970,AT5G46980,AT5G47000,AT5G47530,AT5G48140,AT5G48210,AT5G48400,AT5G49070,AT5G49260,AT5G49270,AT5G49420,AT5G49680,AT5G49920,AT5G50060,AT5G50780,AT5G50800,AT5G50830,AT5G51030,AT5G51950,AT5G52290,AT5G52330,AT5G52340,AT5G52360,AT5G53190,AT5G53250,AT5G53510,AT5G53820,AT5G54010,AT5G54030,AT5G54060,AT5G54080,AT5G54240,AT5G54570,AT5G55490,AT5G55590,AT5G55890,AT5G55930,AT5G55970,AT5G55980,AT5G56570,AT5G56750,AT5G57200,AT5G57320,AT5G57380,AT5G57690,AT5G57810,AT5G58050,AT5G58160,AT5G58170,AT5G58460,AT5G58880,AT5G59040,AT5G59845,AT5G60010,AT5G60080,AT5G60500,AT5G60510,AT5G60660,AT5G60740,AT5G61110,AT5G61260,AT5G61320,AT5G61430,AT5G61610,AT5G61620,AT5G61630,AT5G61690,AT5G62060,AT5G62240,AT5G62310,AT5G62320,AT5G62750,AT5G62850,AT5G63070,AT5G64510,AT5G64690,AT5G64790,AT5G64820,AT5G65110,AT5G65205,AT5G65690,AT5G65790,AT5G66020,AT5G66150,AT5G66170,AT5G66690,AT5G66740,AT5G66830,AT5G67550,AT1G07610,AT1G08920,AT1G09380,AT1G17380,AT1G19200,AT1G60320,AT1G61070,AT1G66400,AT1G71160,AT2G03850,AT2G21140,AT2G25625,AT2G30650,AT2G31980,AT2G34790,AT2G38250,AT2G38400,AT2G38490,AT2G42890,AT2G44010,AT2G44260,AT3G14280,AT3G14560,AT3G15440,AT3G26010,AT3G26940,AT3G27710,AT3G28007,AT3G28210,AT3G52780,AT3G52810,AT3G54530,AT3G56360,AT3G57010,AT3G57510,AT4G01430,AT4G10960,AT4G16640,AT4G18550,AT4G19080,AT4G30490,AT4G34320,AT4G36740,AT4G39700,AT5G04250,AT5G05340,AT5G07530,AT5G14860,AT5G16360,AT5G22200,AT5G23190,AT5G24270,AT5G37170,AT5G39610,AT5G41040,AT5G47340,AT5G62080,AT5G65870 WELLMER_CPPEL_AG_FLOWER-CDNA_DN Down-regulated carpel-expressed genes that were used to enhance the prediction of carpel-specific transcripts by ag in the predictions of array elements of the flower-specific cDNA array representing floral organ-expressed transcripts are summarized. (Table S11 PubmedID:15100403) AT2G31430,AT2G45660,AT3G57390,AT4G09960,AT1G20450,AT1G02930,AT5G05410,AT3G23130,AT3G58780,AT1G69180,AT5G60910,AT4G12960,AT5G59310,AT4G14130,AT1G52030,AT2G02850,AT1G62210,AT5G59320,AT2G42830,AT1G23420,AT2G41230,AT4G12890,AT3G20210,AT1G70830,AT1G55020,AT4G23690,AT5G24780,AT5G65660,AT1G30795,AT3G12145,AT5G59120,AT5G06870,AT1G78780,AT4G18960,AT5G09730,AT5G06190,AT1G73220,AT1G17030,AT2G34870,AT1G57750,AT2G23790,AT1G44970,AT5G06860,AT5G24420,AT5G44630,AT3G16470,AT5G20830,AT5G53120,AT5G15650,AT5G42850,AT4G34580,AT2G38530,AT1G56580,AT3G02230,AT1G27400,AT3G48690,AT2G38610,AT5G07560,AT1G48750,AT1G29510,AT1G78490,AT3G26140,AT2G41800,AT1G05480,AT5G48180 WELLMER_CPPEL_AP1_FLOWER-CDNA_UP Up-regulated carpel-expressed genes that were used to enhance the prediction of carpel-specific transcripts by ap1 in the predictions of array elements of the flower-specific cDNA array representing floral organ-expressed transcripts are summarized. (Table S11 PubmedID:15100403) AT1G27400,AT2G38610,AT3G16470,AT5G06870,AT5G24780,AT5G42850 WELLMER_CPPEL_AP2_FLOWER-CDNA_UP Up-regulated carpel-expressed genes that were used to enhance the prediction of carpel-specific transcripts by ap2 in the predictions of array elements of the flower-specific cDNA array representing floral organ-expressed transcripts are summarized. (Table S11 PubmedID:15100403) AT2G02850,AT2G41800,AT3G20210,AT5G24780,AT1G27400,AT3G16470,AT5G42850 WELLMER_CPPEL_AP3_FLOWER-CDNA_UP Up-regulated carpel-expressed genes that were used to enhance the prediction of carpel-specific transcripts by ap3 in the predictions of array elements of the flower-specific cDNA array representing floral organ-expressed transcripts are summarized. (Table S11 PubmedID:15100403) AT2G41800 WELLMER_CPPEL_PI_CDNA_UP Up-regulated carpel-expressed genes that were used to enhance the prediction of carpel-specific transcripts by pi in the predictions of array elements of the flower-specific cDNA array representing floral organ-expressed transcripts are summarized. (Table S11 PubmedID:15100403) AT2G02850,AT2G41800,AT4G23690 WELLMER_CPPEL_AG_OLIGONUCLEOTIDE_DN Down-regulated carpel-expressed genes that were used to enhance the prediction of carpel-specific transcripts by ag in the predictions of array elements of the oligonucleotide array representing floral organ-expressed transcripts are summarized. (Table S12 PubmedID:15100403) AT1G72110,AT2G29995,AT2G44470,AT5G39090,AT5G57020,AT1G20450,AT2G34010,AT3G13850,AT3G60020,AT4G15610,AT5G01040,AT5G36130,AT5G54730,AT5G55950,AT5G61710,AT3G43960,AT3G58000,AT2G30250,AT3G50940,AT3G53060,AT5G23820,AT1G64060,AT2G36950,AT3G24790,AT3G46080,AT4G21850,AT5G17860,AT2G37760,AT3G49770,AT4G36380,AT5G59530,AT3G27330,AT4G22540,AT5G20830,AT1G65500,AT1G80600,AT2G03000,AT2G22560,AT2G45290,AT3G10720,AT3G25080,AT3G55640,AT4G04080,AT5G08090,AT5G54690,AT1G35730,AT4G34138,AT5G60000,AT1G02530,AT2G47550,AT3G17010,AT4G15490,AT4G16190,AT5G14990,AT1G42470,AT1G47480,AT1G52030,AT2G42410,AT3G21040,AT4G02810,AT1G34180,AT1G71697,AT3G20470,AT4G30590,AT5G52320,AT5G53970,AT1G53580,AT1G70680,AT2G14900,AT4G18170,AT1G16390,AT3G11600,AT3G17150,AT3G25730,AT5G16370,AT1G15310,AT3G51860,AT3G53370,AT4G37250,AT5G53320,AT3G21230,AT5G22460,AT5G52300,AT5G64110,AT4G16480,AT1G09510,AT1G53470,AT3G04530,AT3G25580,AT4G05590,AT4G32110,AT2G24580,AT2G33380,AT4G37400,AT1G03940,AT4G14930,AT1G73480,AT1G35860,AT2G19800,AT4G39000,AT5G58780,AT1G01120,AT3G22240,AT4G20860,AT4G23010,AT1G54100,AT1G66060,AT2G41380,AT3G14530,AT3G60160,AT4G28150,AT5G58660,AT1G14460,AT1G69850,AT4G38850,AT5G07740,AT1G29460,AT2G46150,AT5G17820,AT2G21770,AT2G32190,AT4G34250,AT5G63130,AT1G63210,AT1G75890,AT5G59820,AT2G37770,AT5G65300,AT2G35310,AT2G37210,AT4G36430,AT5G02730,AT5G64870,AT1G45226,AT5G51480,AT3G44560,AT4G29290,AT5G47740,AT5G64570,AT4G26350,AT5G11360,AT5G54850,AT2G42930,AT1G23420,AT3G16650,AT5G14180,AT2G33750,AT5G67110,AT3G19230,AT5G18090,AT5G42280,AT2G06090,AT3G23130,AT2G39350,AT4G15160,AT5G51500,AT1G65240,AT1G74490,AT3G56610,AT5G02700,AT5G09490,AT5G61120,AT1G54450,AT4G23690,AT2G36110,AT3G05440,AT4G18580,AT1G22650,AT1G62280,AT5G20340,AT5G56490,AT3G48690,AT3G52820,AT1G05450,AT5G50480,AT1G67070,AT3G59030,AT4G19230,AT5G45910,AT5G14000,AT3G21500,AT4G24040,AT4G36110,AT4G36770,AT5G07280,AT5G26220,AT5G61740,AT1G71691,AT2G34870,AT2G39540,AT3G13380,AT5G04340,AT3G20520,AT5G47590,AT5G63730,AT2G23790,AT4G30280,AT5G25970,AT5G60610,AT2G23010,AT4G35370,AT5G05410,AT5G43690,AT5G67340,AT1G61290,AT2G03210,AT4G22470,AT4G35720,AT5G51810,AT1G55020,AT3G02940,AT3G18610,AT5G66870,AT1G12890,AT2G29350,AT3G61840,AT4G14560,AT5G11950,AT1G76750,AT5G06720,AT1G11540,AT1G36340,AT1G64340,AT1G33170,AT1G69180,AT1G04250,AT1G14870,AT1G71890,AT2G36890,AT2G43510,AT3G24510,AT3G03670,AT4G11290,AT5G08600,AT5G38130,AT1G06920,AT3G19930,AT2G03290,AT4G14130,AT2G41780,AT3G48180,AT1G20350,AT5G58400,AT2G02490,AT4G00910,AT5G14190,AT3G56350,AT3G59220,AT5G22420,AT4G36670,AT4G21480,AT2G30090,AT5G62970,AT1G20790,AT5G15720,AT3G53040,AT1G17260,AT5G18130,AT4G22490,AT5G25950,AT4G15530,AT4G04220,AT3G28560,AT4G38000,AT1G20680,AT2G16720,AT2G35930,AT1G12670,AT2G15780,AT1G68620,AT4G10640,AT2G44080,AT4G18540,AT5G23260,AT1G52660,AT3G04540,AT4G26150,AT4G18960,AT5G37300,AT2G21540,AT2G25540,AT2G17000,AT2G44480,AT2G24620,AT4G19690,AT5G53710,AT4G17505,AT5G50200,AT2G41700,AT5G05640,AT5G26340,AT4G22590,AT1G05480,AT3G10780,AT1G56710,AT2G32210,AT2G35250,AT5G11400,AT5G44635,AT4G26590,AT5G07680,AT2G26440,AT2G38340,AT5G59810,AT2G41800,AT5G53110,AT1G73830,AT2G20070,AT5G42230,AT5G57240,AT1G75040,AT2G03980,AT3G17225,AT1G06080,AT2G17660,AT5G44690,AT4G32170,AT1G06520,AT5G63350,AT1G02520,AT1G10550,AT5G22970,AT4G19810,AT1G02400,AT5G57500,AT4G27860,AT1G30840,AT2G21655,AT5G62150,AT1G23760,AT3G28570,AT1G22240,AT3G10560,AT5G43230,AT5G54560,AT4G26280,AT5G57780,AT4G37050,AT1G30795,AT3G17080,AT1G23510,AT2G13620,AT5G09730,AT1G78780,AT3G48580,AT2G21650,AT2G21450,AT3G59850,AT2G02010,AT5G44630,AT4G00920,AT5G38900,AT5G56510,AT2G38530,AT5G47150,AT4G21630,AT2G46960,AT2G34700,AT1G24540,AT3G46770,AT5G20330,AT5G60380,AT5G11120,AT1G47510,AT1G72200,AT5G46960,AT4G09740,AT5G02540,AT3G05460,AT5G58782,AT3G58780,AT5G12060,AT5G22960,AT2G27880,AT5G44480,AT3G61930,AT1G75050,AT3G11990,AT4G13261,AT1G17030,AT1G28710,AT4G23350,AT3G20210,AT2G12480,AT2G02850,AT5G59090,AT2G42830,AT5G60140,AT3G12000,AT5G53720,AT2G33850,AT3G14520,AT3G09950,AT1G72290,AT5G49180,AT5G07120,AT4G12870,AT1G44970,AT4G12890,AT3G49270,AT1G25330,AT1G53130,AT4G09960 WELLMER_CPPEL_AP1_OLIGONUCLEOTIDE_UP Up-regulated carpel-expressed genes that were used to enhance the prediction of carpel-specific transcripts by ap1 in the predictions of array elements of the oligonucleotide array representing floral organ-expressed transcripts are summarized. (Table S12 PubmedID:15100403) AT4G36430,AT1G56710,AT3G11990,AT2G33850,AT5G07740,AT1G75040,AT5G26220,AT4G00910,AT4G13261,AT1G45226,AT3G28560,AT3G12000,AT4G22490,AT2G21655,AT3G61840,AT4G11290,AT5G11400,AT1G12890,AT1G75890,AT3G17080,AT5G37300,AT1G72110,AT2G37210,AT1G72290,AT3G28570,AT4G35720,AT4G26150,AT5G15720,AT5G45910,AT1G06080,AT3G56610,AT5G23820,AT5G38900,AT5G60000,AT5G20330,AT5G44690,AT5G53710,AT4G37050,AT5G22960,AT5G47740,AT5G52320,AT2G17000,AT2G41800,AT3G03670,AT1G52030,AT4G12890,AT5G38130,AT1G36340,AT2G02490,AT3G44560,AT4G12870,AT1G02520,AT2G24620,AT5G53110,AT1G25330,AT2G26440,AT5G22970,AT5G47150,AT3G21040,AT4G26590,AT5G52300,AT5G53720,AT1G23760,AT2G34700,AT3G59220,AT5G58400,AT2G12480,AT2G30090,AT3G17010,AT3G60160,AT1G76750,AT4G26280,AT4G34250,AT5G25950,AT2G42930,AT4G18960,AT4G23690,AT1G01120,AT1G05450,AT1G44970,AT1G73830,AT5G07280,AT2G43510,AT5G57240,AT5G62970,AT1G02530,AT3G20210,AT3G23130,AT4G27860,AT5G09730,AT1G53130,AT1G65500,AT2G35310,AT4G21850,AT5G57500,AT5G64870,AT1G05480,AT2G13620,AT3G46770,AT4G15160,AT5G11950,AT5G54690,AT2G35250,AT3G48690,AT3G58780,AT4G22540,AT4G37400,AT4G38000,AT5G01040,AT5G20340,AT1G28710,AT1G52660,AT3G10720,AT3G25730,AT4G00920,AT5G65300,AT3G43960,AT4G30590,AT5G07120,AT2G15780,AT2G36890,AT3G46080,AT3G59850,AT4G10640,AT4G18540,AT5G62150,AT2G16720,AT2G38530,AT2G42410,AT3G21230,AT1G12670,AT1G47480,AT2G36110,AT3G60020,AT5G59530,AT5G59810,AT1G03940,AT2G21450,AT2G27880,AT2G34010,AT3G10780,AT4G19230,AT4G21630,AT5G51810,AT2G44470,AT5G14000,AT5G17820,AT1G30795,AT3G10560,AT3G52820,AT4G04220,AT4G14560,AT4G19690,AT5G36130,AT5G56490,AT1G72200,AT2G03980,AT2G23010,AT2G41700,AT3G04540,AT1G11540,AT1G20350,AT1G30840,AT1G75050,AT2G21650,AT2G42830,AT3G17225,AT4G36110,AT5G02540,AT5G56510,AT5G67110,AT3G20470,AT4G20860,AT4G36770,AT4G39000,AT5G42230,AT5G50200,AT5G51500,AT5G67340,AT1G24540,AT3G14530,AT3G20520,AT5G22460,AT1G06520,AT3G58000,AT4G09960,AT4G23010,AT5G11120,AT5G18090,AT1G33170,AT2G20070,AT3G18610,AT4G15490,AT5G39090,AT5G49180,AT5G63350,AT2G29995,AT2G34870,AT2G47550,AT1G14870,AT1G42470,AT1G64060,AT3G09950,AT3G11600,AT5G44630,AT5G57020,AT5G59820,AT4G38850,AT5G44635,AT5G47590,AT5G55950,AT1G14460,AT1G15310,AT2G46150,AT4G32170,AT1G04250,AT1G20790,AT1G63210,AT2G23790,AT2G44080,AT4G09740,AT4G17505,AT4G21480,AT5G60140,AT1G35730,AT2G35930,AT2G41780,AT3G16650,AT3G50940,AT5G25970,AT5G58780,AT5G63130,AT1G68620,AT3G19930,AT5G08090,AT2G02850,AT3G14520 WELLMER_CPPEL_AP1_OLIGONUCLEOTIDE_DN Down-regulated carpel-expressed genes that were used to enhance the prediction of carpel-specific transcripts by ap1 in the predictions of array elements of the oligonucleotide array representing floral organ-expressed transcripts are summarized. (Table S12 PubmedID:15100403) AT2G02850,AT3G14520,AT4G26350,AT5G05640,AT5G12060,AT5G59090,AT1G06920,AT1G10550,AT2G03290,AT4G29290,AT1G55020,AT2G17660,AT3G17150,AT3G49270,AT4G16190,AT5G17860,AT5G44480,AT5G61120,AT1G64340,AT2G45290,AT4G28150,AT5G61740,AT5G23260,AT5G42280,AT1G02400,AT4G36670,AT4G37250,AT5G02700,AT1G35860,AT1G69850,AT2G22560,AT3G48580,AT5G05410,AT5G60380,AT2G39350,AT3G49770,AT5G14190,AT5G50480,AT5G58782,AT1G20680,AT1G74490,AT2G30250,AT2G37760,AT1G34180,AT1G62280,AT1G65240,AT2G03210,AT4G14930,AT4G22590,AT5G26340,AT1G23420,AT1G71890,AT2G14900,AT2G25540,AT3G04530,AT4G34138,AT5G51480,AT1G23510,AT3G48180,AT5G43690,AT3G22240,AT4G16480,AT5G04340,AT5G14180,AT5G61710,AT2G21540,AT3G13380,AT4G36380,AT5G09490,AT5G46960,AT5G66870,AT1G17030,AT2G06090,AT2G33750,AT3G27330,AT1G16390,AT1G22240,AT1G53470,AT3G25080,AT1G54450,AT1G71697,AT4G14130,AT5G08600,AT5G22420,AT3G61930,AT4G04080,AT5G18130,AT5G57780,AT1G20450,AT3G13850,AT3G53370,AT5G14990,AT5G60610,AT1G29460,AT3G05440,AT3G53060,AT5G07680,AT1G67070,AT2G29350,AT3G19230,AT3G59030,AT4G02810,AT5G11360,AT5G43230,AT5G63730,AT1G53580,AT1G61290,AT2G02010,AT3G55640,AT1G54100,AT4G05590,AT1G09510,AT3G21500,AT4G22470,AT5G53970,AT2G19800,AT4G32110,AT1G73480,AT2G33380,AT2G24580,AT3G24790,AT2G03000,AT1G78780,AT1G80600,AT3G25580,AT3G53040,AT2G38340,AT1G69180,AT2G32190,AT2G44480,AT4G18170,AT4G30280,AT2G21770,AT5G53320,AT5G54730,AT5G54850,AT3G05460,AT5G64570,AT3G02940,AT3G51860,AT1G66060,AT4G35370,AT5G58660,AT4G18580,AT4G15530,AT5G54560,AT2G32210,AT3G24510,AT1G47510,AT1G71691,AT1G70680,AT5G64110,AT1G22650,AT5G16370,AT3G56350,AT4G24040,AT5G20830,AT2G36950,AT2G39540,AT2G46960,AT4G19810,AT4G15610,AT2G41380,AT5G02730,AT2G37770,AT4G23350,AT5G06720,AT1G17260 WELLMER_CPPEL_AP2_OLIGONUCLEOTIDE_UP Up-regulated carpel-expressed genes that were used to enhance the prediction of carpel-specific transcripts by ap2 in the predictions of array elements of the oligonucleotide array representing floral organ-expressed transcripts are summarized. (Table S12 PubmedID:15100403) AT3G03670,AT2G17000,AT3G09950,AT5G53710,AT2G38530,AT3G20210,AT4G21630,AT4G04220,AT4G21480,AT1G55020,AT2G02850,AT4G00910,AT1G25330,AT1G53470,AT1G02400,AT2G41700,AT3G53040,AT4G12890,AT5G58400,AT1G73830,AT2G25540,AT4G23690,AT5G44480,AT2G41800,AT5G11400,AT4G37050,AT5G22960,AT1G17260,AT2G24620,AT3G20470,AT3G59220,AT4G10640,AT1G01120,AT2G46960,AT5G53110,AT5G67340,AT2G30090,AT3G48180,AT5G47150,AT2G21450,AT3G12000,AT4G19810,AT5G49180,AT5G57240,AT5G60140,AT3G58780,AT1G63210,AT2G39350,AT3G02940,AT4G26150,AT1G05450,AT1G12890,AT5G59810,AT1G02530,AT4G18540,AT4G35720,AT5G14000,AT4G09960,AT5G07120,AT5G23260,AT5G57500,AT3G59030,AT5G37300,AT5G67110,AT1G20350,AT2G03980,AT3G46770,AT4G36430,AT2G33750,AT1G30795,AT2G42830,AT2G46150,AT3G18610,AT4G19690,AT5G38900,AT5G44690,AT1G35860,AT1G75890,AT2G35250,AT5G11360,AT1G05480,AT1G24540,AT1G62280,AT3G10560,AT1G20680,AT4G36380,AT2G21650,AT3G10780,AT3G48580,AT3G59850,AT4G38000,AT5G61740,AT5G65300,AT3G43960,AT4G00920,AT5G22460,AT5G43230,AT1G04250,AT1G68620,AT1G71691,AT2G12480,AT4G36670,AT5G59820,AT1G56710,AT2G29350,AT3G60160,AT4G19230,AT5G25970,AT5G39090,AT3G61840,AT4G22470,AT5G62150,AT1G72290,AT2G02010,AT3G11600,AT3G52820,AT4G34250,AT1G06920,AT1G34180,AT1G47510,AT1G73480,AT2G21655,AT5G02540,AT5G18090,AT5G57780,AT2G44480,AT5G17820,AT1G47480,AT2G26440,AT2G33380,AT4G15160,AT4G15610,AT4G37250,AT5G53320,AT5G56490,AT1G64340,AT2G23010,AT3G21040,AT3G46080,AT4G14930,AT4G17505,AT4G30590,AT4G38850,AT5G44635,AT1G06080,AT1G28710,AT2G32190,AT2G32210,AT4G11290,AT4G13261,AT4G14130,AT4G34138,AT4G39000,AT5G05410,AT1G70680,AT1G75050,AT3G23130,AT4G22540,AT5G07280,AT5G60610,AT1G09510,AT1G30840,AT1G53130,AT2G02490,AT2G19800,AT3G55640,AT4G26590,AT5G09730,AT2G38340,AT4G14560,AT5G51810,AT5G53720,AT1G72110,AT2G20070,AT2G35310,AT2G42930,AT3G10720,AT3G17225,AT3G48690,AT3G56610,AT4G30280,AT5G42230,AT1G78780,AT3G49270,AT3G22240,AT4G18960,AT5G51500,AT1G12670,AT2G14900,AT4G23010,AT2G23790,AT3G27330,AT5G14180,AT2G33850,AT2G43510,AT3G11990,AT3G17010,AT5G17860,AT5G58660,AT1G17030,AT2G44080,AT3G56350,AT4G09740,AT4G22490,AT5G26220,AT5G62970,AT1G10550,AT1G15310,AT4G18170,AT4G37400,AT1G52030,AT1G76750,AT3G04540,AT3G17150,AT3G61930,AT5G07740,AT1G14460,AT2G34870,AT4G29290,AT5G09490,AT5G20330,AT5G22970,AT5G50200,AT5G51480,AT5G54850,AT1G20450,AT2G47550,AT3G20520,AT3G21230,AT4G26280,AT4G35370,AT5G12060,AT5G15720,AT5G63130,AT2G29995,AT3G17080,AT4G36110,AT5G58780,AT2G34010,AT2G44470,AT4G02810,AT5G16370,AT5G56510,AT1G67070,AT2G06090,AT2G22560,AT5G14190,AT1G69180,AT4G24040,AT4G27860,AT1G44970,AT2G27880,AT3G13380,AT3G14520,AT5G58782,AT5G64570,AT5G64870,AT1G36340,AT2G37760,AT5G60380,AT5G01040,AT5G44630,AT5G47590,AT3G51860,AT4G12870,AT4G15490,AT5G04340,AT5G06720,AT5G11950,AT1G11540,AT5G18130,AT5G36130,AT5G42280,AT3G05460,AT3G16650,AT4G18580,AT1G45226,AT2G42410,AT3G49770,AT5G22420,AT5G43690,AT2G16720,AT4G32170,AT5G26340,AT5G47740,AT1G80600,AT1G72200,AT2G30250,AT2G36950,AT3G04530,AT1G52660,AT3G50940,AT5G20830 WELLMER_CPPEL_AP2_OLIGONUCLEOTIDE_DN Down-regulated carpel-expressed genes that were used to enhance the prediction of carpel-specific transcripts by ap2 in the predictions of array elements of the oligonucleotide array representing floral organ-expressed transcripts are summarized. (Table S12 PubmedID:15100403) AT1G06520,AT1G35730,AT4G32110,AT5G46960,AT5G61710,AT1G14870,AT2G17660,AT4G04080,AT4G22590,AT4G36770,AT5G05640,AT5G54730,AT5G59090,AT1G03940,AT1G23760,AT1G66060,AT4G23350,AT5G64110,AT1G54100,AT2G21770,AT2G36890,AT5G38130,AT5G50480,AT3G25730,AT5G53970,AT2G21540,AT2G39540,AT1G02520,AT1G33170,AT3G13850,AT5G08090,AT5G60000,AT2G03000,AT5G52320,AT3G24790,AT5G45910,AT5G59530,AT1G75040,AT2G03210,AT2G37210,AT2G24580,AT3G24510,AT4G20860,AT5G02730,AT1G71890,AT5G63730,AT2G03290,AT4G16190,AT4G28150,AT5G08600,AT1G53580,AT3G19230,AT5G54560,AT3G14530,AT3G25580,AT5G61120,AT1G69850,AT5G66870,AT1G65500,AT5G20340,AT5G54690,AT1G23420,AT1G64060,AT4G21850,AT3G21500,AT2G36110,AT1G42470,AT3G19930,AT5G63350,AT4G26350,AT5G23820,AT2G13620,AT5G52300,AT3G53060,AT2G35930,AT3G53370,AT1G54450,AT2G34700,AT2G45290,AT5G55950,AT1G22240,AT2G15780,AT2G37770,AT3G05440,AT3G25080,AT5G25950,AT1G61290,AT5G07680,AT4G15530,AT3G58000,AT3G44560,AT4G05590,AT4G16480,AT1G29460,AT1G65240,AT1G20790,AT1G23510,AT3G28560,AT5G57020,AT1G22650,AT1G71697,AT5G11120,AT1G16390,AT2G41780,AT1G74490,AT5G14990,AT2G41380,AT5G02700,AT3G28570,AT3G60020 WELLMER_CPPEL_AP3_OLIGONUCLEOTIDE_UP Up-regulated carpel-expressed genes that were used to enhance the prediction of carpel-specific transcripts by ap3 in the predictions of array elements of the oligonucleotide array representing floral organ-expressed transcripts are summarized. (Table S12 PubmedID:15100403) AT2G17000,AT2G33850,AT4G00910,AT5G11400,AT3G12000,AT3G03670,AT1G45226,AT3G53040,AT1G75040,AT3G11990,AT5G38900,AT2G15780,AT5G44690,AT5G53710,AT4G00920,AT4G35720,AT4G11290,AT4G13261,AT5G67340,AT1G53130,AT1G72290,AT2G21655,AT5G17820,AT5G22960,AT1G25330,AT2G41800,AT4G37050,AT5G60000,AT2G24620,AT3G61840,AT5G22970,AT5G57500,AT1G75890,AT4G18540,AT5G53720,AT5G45910,AT2G02850,AT3G02940,AT1G73830,AT1G05450,AT4G04220,AT5G25970,AT1G76750,AT1G35860,AT2G29995,AT2G38530,AT2G13620,AT5G53110,AT2G03980,AT4G34250,AT1G28710,AT1G30795,AT3G10560,AT5G11360,AT4G23690,AT4G36770,AT1G12890,AT3G17080,AT3G56610,AT3G60160,AT5G20330,AT5G20340,AT3G59850,AT4G19810,AT4G38000,AT2G02490,AT4G19690,AT1G11540,AT2G12480,AT2G26440,AT4G26280,AT1G55020,AT1G56710,AT4G14560,AT5G50200,AT1G06080,AT2G41700,AT3G59220,AT2G21450,AT5G47150,AT4G26150,AT5G09730,AT5G59810,AT1G04250,AT1G53470,AT1G62280,AT2G21650,AT3G48180,AT5G14000,AT5G59820,AT3G58780,AT3G43960,AT2G35310,AT3G10720,AT4G23010,AT1G06520,AT3G14530,AT3G49270,AT5G60140,AT1G02400,AT4G37400,AT5G58780,AT5G67110,AT2G42410,AT2G42830,AT4G14130,AT4G15160,AT5G15720,AT3G22240,AT3G28560,AT5G57240,AT1G24540,AT1G44970,AT1G47510,AT3G28570,AT5G60380,AT3G23130,AT5G44480,AT3G17225,AT3G46080,AT3G48690,AT4G37250,AT5G47740,AT3G20210,AT4G21630,AT1G10550,AT4G38850,AT5G42230,AT5G65300,AT1G72110,AT4G09960,AT1G20350,AT1G47480,AT1G78780,AT2G39350,AT2G46960,AT2G02010,AT2G34870,AT3G10780,AT5G07120,AT1G05480,AT1G14460,AT1G64340,AT4G10640,AT4G26590,AT2G27880,AT2G46150,AT3G09950,AT3G46770,AT4G17505,AT5G37300,AT5G52320,AT5G23260,AT5G56490,AT2G30090,AT2G37210,AT2G44080,AT3G59030,AT5G64870,AT3G14520,AT3G17150,AT4G36380,AT3G16650,AT4G36670,AT5G58660,AT5G58782,AT1G23420,AT2G34700,AT3G51860,AT5G18090,AT1G72200,AT4G34138,AT5G01040,AT3G04540,AT4G12890,AT4G30590,AT5G22460,AT3G20520,AT1G36340,AT2G44480,AT4G12870,AT4G36110,AT1G06920,AT4G21850,AT5G61740,AT1G02530,AT1G34180,AT1G12670,AT1G63210,AT2G23010,AT3G17010,AT5G25950,AT2G35250,AT3G24510,AT4G21480,AT5G07280,AT5G58400,AT5G62970,AT4G22540,AT5G57780 WELLMER_CPPEL_AP3_OLIGONUCLEOTIDE_DN Dwon-regulated carpel-expressed genes that were used to enhance the prediction of carpel-specific transcripts by ap3 in the predictions of array elements of the oligonucleotide array representing floral organ-expressed transcripts are summarized. (Table S12 PubmedID:15100403) AT2G36110,AT2G25540,AT3G20470,AT5G54850,AT5G51810,AT3G11600,AT1G23760,AT1G33170,AT2G21540,AT4G22470,AT3G13380,AT1G75050,AT2G44470,AT4G30280,AT5G26220,AT3G21230,AT4G32170,AT5G44635,AT1G35730,AT5G49180,AT5G62150,AT1G09510,AT2G06090,AT2G29350,AT3G55640,AT5G02540,AT1G01120,AT1G52660,AT2G42930,AT3G21040,AT5G39090,AT5G56510,AT4G09740,AT5G59090,AT2G03290,AT5G11120,AT5G51480,AT5G61710,AT1G17030,AT2G14900,AT2G33750,AT5G64110,AT1G71691,AT2G36890,AT3G18610,AT4G22490,AT5G11950,AT1G65500,AT3G21500,AT5G14190,AT1G30840,AT4G24040,AT5G14180,AT5G42280,AT5G47590,AT5G52300,AT5G53320,AT3G44560,AT4G18170,AT5G22420,AT1G69180,AT3G56350,AT4G02810,AT4G16190,AT2G37770,AT5G26340,AT3G52820,AT5G63730,AT2G45290,AT3G05440,AT3G25580,AT4G22590,AT4G36430,AT3G25080,AT1G14870,AT5G02700,AT5G43690,AT5G12060,AT2G03000,AT2G19800,AT2G34010,AT4G29290,AT2G33380,AT5G54560,AT1G15310,AT1G80600,AT2G21770,AT1G20680,AT5G44630,AT1G20450,AT5G60610,AT1G17260,AT1G23510,AT5G57020,AT4G23350,AT5G50480,AT2G20070,AT5G07680,AT5G43230,AT4G35370,AT5G05640,AT3G25730,AT3G49770,AT3G53370,AT4G32110,AT3G05460,AT4G15610,AT3G27330,AT5G16370,AT2G47550,AT5G23820,AT5G54690,AT1G02520,AT1G16390,AT2G35930,AT3G50940,AT4G39000,AT5G02730,AT5G07740,AT5G54730,AT1G70680,AT4G14930,AT5G61120,AT1G74490,AT5G17860,AT2G37760,AT2G41780,AT2G43510,AT3G24790,AT3G19930,AT2G41380,AT4G27860,AT5G08090,AT5G66870,AT2G17660,AT3G53060,AT4G20860,AT5G08600,AT3G61930,AT1G65240,AT4G16480,AT1G03940,AT5G53970,AT5G09490,AT5G63350,AT1G53580,AT2G36950,AT4G18580,AT5G06720,AT2G16720,AT2G38340,AT3G13850,AT3G19230,AT1G52030,AT4G04080,AT5G04340,AT5G14990,AT5G59530,AT2G32190,AT4G15530,AT5G36130,AT5G38130,AT1G61290,AT1G71697,AT2G32210,AT4G18960,AT4G28150,AT1G54100,AT2G30250,AT2G39540,AT5G46960,AT2G03210,AT3G48580,AT1G73480,AT2G23790,AT1G22240,AT1G42470,AT5G51500,AT1G71890,AT5G18130,AT5G05410,AT1G64060,AT1G67070,AT1G69850,AT2G24580,AT5G20830,AT4G15490,AT4G19230,AT5G55950,AT5G63130,AT4G26350,AT1G22650,AT1G68620,AT3G58000,AT1G66060,AT2G22560,AT3G60020,AT4G05590,AT1G20790,AT1G54450,AT3G04530,AT5G64570,AT1G29460 WELLMER_CPPEL_PI_OLIGONUCLEOTIDE_UP Up-regulated carpel-expressed genes that were used to enhance the prediction of carpel-specific transcripts by pi in the predictions of array elements of the oligonucleotide array representing floral organ-expressed transcripts are summarized. (Table S12 PubmedID:15100403) AT2G15780,AT4G00910,AT2G17000,AT2G33850,AT3G11990,AT5G11400,AT1G45226,AT1G72290,AT2G21655,AT3G03670,AT1G75040,AT3G12000,AT4G11290,AT5G38900,AT4G00920,AT1G53130,AT4G37050,AT5G45910,AT5G53710,AT2G24620,AT5G57500,AT4G13261,AT4G35720,AT2G41800,AT5G44690,AT1G25330,AT5G60000,AT1G36340,AT5G22960,AT5G53720,AT4G38000,AT3G46080,AT5G22970,AT2G29995,AT4G12890,AT3G10560,AT4G18540,AT5G67340,AT3G61840,AT1G75890,AT2G02850,AT2G41700,AT4G04220,AT1G73830,AT1G12890,AT2G21450,AT3G56610,AT2G26440,AT4G21630,AT5G07120,AT5G17820,AT5G20330,AT1G05450,AT3G53040,AT4G23690,AT1G76750,AT3G59220,AT4G26280,AT1G35860,AT5G25970,AT2G13620,AT1G56710,AT4G34250,AT5G47150,AT2G38530,AT3G20210,AT5G14000,AT1G30795,AT2G21650,AT2G35310,AT2G42830,AT1G28710,AT5G11360,AT1G12670,AT2G03980,AT3G10780,AT4G12870,AT4G14130,AT5G53110,AT5G60140,AT3G28570,AT3G58780,AT5G67110,AT2G12480,AT3G10720,AT1G04250,AT2G02490,AT3G17225,AT3G59850,AT4G36770,AT3G60160,AT4G19690,AT5G42230,AT3G49270,AT4G37400,AT5G58780,AT5G61740,AT2G42410,AT1G53470,AT3G04540,AT4G19810,AT4G38850,AT1G24540,AT3G02940,AT4G26150,AT1G06080,AT3G28560,AT4G10640,AT4G14560,AT5G65300,AT5G23260,AT1G05480,AT2G20070,AT2G46150,AT3G43960,AT4G23010,AT4G30590,AT5G49180,AT5G58782,AT5G60380,AT1G02530,AT1G72110,AT2G46960,AT3G21040,AT3G59030,AT1G14460,AT3G17080,AT2G02010,AT5G18090,AT1G11540,AT3G21500,AT4G26590,AT1G02400,AT2G37210,AT3G24510,AT4G09960,AT3G23130,AT5G22460,AT5G50200,AT5G51810,AT1G47510,AT2G42930,AT3G48180,AT4G21480,AT4G36670,AT5G09730,AT5G47740,AT5G58400,AT5G59820,AT3G14530,AT3G17150,AT3G48690,AT4G15160,AT4G17505,AT2G34870,AT3G20470,AT2G23010,AT3G20520,AT4G29290,AT5G59810,AT1G06920,AT2G27880,AT4G32170,AT5G20340,AT2G39350,AT3G46770,AT2G33750,AT5G54850,AT5G56490,AT1G06520,AT1G55020,AT3G11600,AT4G02810,AT5G57780,AT5G62970,AT1G62280,AT1G64340,AT5G15720,AT5G37300,AT3G22240,AT5G57240,AT2G35250,AT1G71691,AT2G06090,AT2G30090,AT5G26220,AT1G35730,AT1G78780,AT3G14520,AT5G07280,AT5G12060,AT3G55640,AT1G44970,AT2G44470,AT5G52320,AT1G20350,AT2G25540,AT4G21850,AT5G39090,AT1G52660,AT4G36380,AT1G01120,AT1G65500,AT2G03290,AT3G09950,AT5G07740,AT3G51860,AT4G37250,AT5G01040,AT4G34138 WELLMER_CPPEL_PI_OLIGONUCLEOTIDE_DN Down-regulated carpel-expressed genes that were used to enhance the prediction of carpel-specific transcripts by pi in the predictions of array elements of the oligonucleotide array representing floral organ-expressed transcripts are summarized. (Table S12 PubmedID:15100403) AT2G44080,AT3G48580,AT4G22490,AT5G58660,AT5G64110,AT1G72200,AT5G42280,AT5G43690,AT2G14900,AT2G34700,AT3G52820,AT1G33170,AT1G63210,AT4G22470,AT2G29350,AT4G22540,AT4G35370,AT5G11950,AT5G14180,AT1G10550,AT3G17010,AT3G61930,AT3G16650,AT4G36110,AT3G05460,AT5G47590,AT1G80600,AT5G02540,AT5G44635,AT2G30250,AT1G47480,AT1G52030,AT5G05640,AT1G23420,AT1G23760,AT1G30840,AT5G46960,AT1G75050,AT2G21540,AT4G20860,AT4G23350,AT4G27860,AT4G39000,AT5G02730,AT5G44480,AT5G52300,AT3G24790,AT1G34180,AT5G54560,AT3G05440,AT3G44560,AT4G24040,AT5G11120,AT5G60610,AT1G15310,AT4G30280,AT5G23820,AT5G53320,AT4G32110,AT5G16370,AT2G34010,AT1G68620,AT5G59090,AT5G64870,AT2G36950,AT3G18610,AT5G14190,AT5G38130,AT1G09510,AT5G50480,AT2G36890,AT2G37770,AT3G25580,AT4G18170,AT1G69180,AT5G62150,AT4G14930,AT1G29460,AT1G17260,AT5G44630,AT5G51480,AT2G03000,AT2G45290,AT3G27330,AT5G56510,AT3G13380,AT3G53370,AT4G36430,AT2G43510,AT1G66060,AT5G54730,AT5G53970,AT5G61710,AT2G32190,AT5G17860,AT3G21230,AT3G58000,AT1G14870,AT1G73480,AT1G65240,AT2G24580,AT2G44480,AT4G04080,AT5G25950,AT5G26340,AT1G61290,AT2G17660,AT4G16480,AT4G18580,AT5G57020,AT2G32210,AT5G43230,AT5G61120,AT2G39540,AT2G47550,AT3G49770,AT4G09740,AT2G19800,AT5G08090,AT1G22650,AT1G70680,AT2G03210,AT2G35930,AT2G37760,AT3G25730,AT5G20830,AT2G33380,AT5G02700,AT2G38340,AT2G41780,AT3G56350,AT4G15610,AT5G05410,AT5G66870,AT5G04340,AT1G17030,AT5G54690,AT2G21770,AT3G25080,AT2G41380,AT3G19930,AT3G53060,AT5G07680,AT1G03940,AT1G71697,AT4G15490,AT5G22420,AT3G60020,AT4G28150,AT1G53580,AT1G20790,AT1G67070,AT1G71890,AT4G16190,AT2G23790,AT5G36130,AT1G54100,AT5G06720,AT1G74490,AT5G08600,AT1G20680,AT1G22240,AT3G13850,AT4G26350,AT1G16390,AT3G04530,AT4G19230,AT5G59530,AT1G20450,AT5G55950,AT2G36110,AT4G22590,AT1G54450,AT3G19230,AT5G09490,AT1G42470,AT1G64060,AT4G05590,AT4G18960,AT5G64570,AT5G14990,AT1G23510,AT5G63130,AT5G63350,AT2G16720,AT4G15530,AT1G02520,AT1G69850,AT2G22560,AT3G50940,AT5G51500,AT5G18130,AT5G63730 WELLMER_RATIOS-R1_UP Up-regulated genes Inferred from Ratios r1 (Table S2 PubmedID:16789830) AT1G21460,AT1G80730,AT3G54340,AT5G22430,AT2G37210,AT3G51660,AT2G42885,AT1G47610,AT5G57720,AT1G78440,AT5G10970,AT4G18960,AT4G32980,AT4G32990,AT1G02610,AT3G17010,AT3G28345,AT1G24260,AT2G39010,AT2G11260,AT1G13600,AT4G25990,AT1G73190,AT3G57720,AT3G14060,AT1G13400,AT1G62690,AT5G06070,AT3G49260,AT1G43000,AT2G06025,AT1G30100,AT3G22160,AT4G37400,AT3G49760,AT1G60060,AT1G52030,AT5G38540,AT2G26150,AT5G16030,AT4G16270,AT3G21670,AT1G05480,AT4G34970,AT4G02670,AT5G13330,AT5G61850,AT5G55430,AT2G01430,AT5G01520,AT3G03450,AT5G53200,AT4G27980,AT4G36920,AT5G01200,AT1G47485,AT1G78860,AT1G64625,AT2G46720,AT1G06520,AT5G51760,AT1G30840,AT1G68480,AT4G21480,AT3G01490,AT1G30950,AT4G28160,AT3G26500,AT4G01060,AT5G20240,AT4G30270,AT1G71870,AT3G26210,AT5G23210,AT1G68320,AT5G51630,AT1G69560,AT1G02190,AT1G24590,AT1G30650,AT5G11160,AT5G26220,AT3G30180,AT3G05160,AT1G64060,AT3G53140,AT4G01480,AT5G51800,AT4G34800,AT1G55330,AT4G32950,AT3G56360,AT3G17640,AT4G24130,AT4G08950,AT3G11000,AT5G16600,AT1G13230,AT1G15360,AT2G46950,AT5G11070,AT4G05240,AT4G15250,AT4G31380,AT4G30410,AT2G03505,AT1G11710,AT5G41050,AT4G36540,AT2G33530,AT3G15720,AT2G20870,AT1G09570,AT1G80080,AT2G37640,AT2G34340,AT4G05380,AT1G72100,AT2G41510,AT1G75430,AT1G04240,AT2G40475,AT2G42410,AT1G06420,AT1G75440,AT5G04880,AT4G01170,AT2G41290,AT1G80580,AT1G35280,AT3G55290,AT5G53390,AT5G39530,AT2G19310,AT5G09570,AT4G37800,AT5G28020,AT4G21590,AT5G44580,AT5G39630,AT1G34245,AT3G15170,AT3G25130,AT4G24700,AT4G20040,AT3G46670,AT2G24210,AT2G42280,AT4G27280,AT5G15210,AT5G05810,AT3G48460,AT3G22370,AT3G60670,AT1G74430,AT1G76090,AT4G39170,AT1G19690,AT4G02630,AT4G20260,AT5G39220,AT3G15300,AT3G57810,AT3G29690,AT5G39760,AT3G13480,AT5G06530,AT3G48640,AT2G17950,AT3G23130,AT1G22910,AT1G23080,AT1G11210,AT4G08850,AT2G43840,AT4G16160,AT1G14030,AT1G57560,AT4G37685,AT1G61260,AT5G48900,AT4G15765,AT4G26120,AT4G37740,AT5G20410,AT3G11090,AT4G38400,AT2G41950,AT3G19990,AT4G36925,AT5G58260,AT4G33000,AT1G80460,AT5G43870,AT5G07240,AT4G32540,AT2G42960,AT2G42830,AT2G44450,AT3G09922,AT2G37470,AT4G21560,AT5G64350,AT4G25170,AT3G13010,AT5G60880,AT4G38860,AT3G04140,AT3G50800,AT4G23050,AT4G09030,AT4G16550,AT1G31290,AT5G62230,AT4G22950,AT1G07500,AT1G73590,AT5G01610,AT5G20830,AT5G47740,AT5G20630,AT4G24150,AT4G34790,AT1G20160,AT1G63420,AT1G70720,AT5G09470,AT3G20180,AT2G25810,AT5G20460,AT2G18120,AT1G49230,AT5G24670,AT5G25470,AT1G28590,AT5G42200,AT1G08180,AT5G22940,AT1G74040,AT3G60890,AT1G22710,AT5G32475,AT2G27250,AT1G24575,AT5G66800,AT3G11230,AT2G25790,AT4G16780,AT5G65170,AT3G09440,AT1G13080,AT4G33010,AT5G23260,AT4G25100,AT5G20810,AT4G05120,AT3G12610,AT4G12850,AT1G15350,AT2G38870,AT1G67600,AT4G34810,AT5G40942,AT5G57270,AT3G61970,AT1G23140,AT5G08150,AT5G51070,AT1G64680,AT5G49330,AT4G34760,AT5G53430,AT1G68710,AT3G24225,AT1G07430,AT1G26945,AT2G03710,AT1G20020,AT3G43110,AT3G24140,AT1G11000,AT2G32610,AT2G28605,AT1G70790,AT2G37880,AT5G47240,AT1G68640,AT1G71230,AT4G00500,AT5G48080,AT3G59690,AT1G75140,AT4G30110,AT3G54960,AT1G77855,AT2G40670,AT4G16265,AT1G05540,AT3G15210,AT3G21890,AT3G26960,AT3G06270,AT2G43670,AT1G30360,AT1G16705,AT2G33205,AT4G33710,AT5G55720,AT5G15430,AT3G63450,AT5G24330,AT4G23400,AT2G02080,AT4G38770,AT3G51895,AT1G30260,AT1G14920,AT1G76790,AT2G01520,AT3G29970,AT1G27540,AT2G31730,AT3G61150,AT2G38430,AT5G20110,AT1G55110,AT3G17430,AT1G77110,AT1G80100,AT4G25620,AT3G17580,AT1G10540,AT2G38340,AT5G19340,AT1G80200,AT2G02795,AT1G36940,AT1G65730,AT5G51890,AT5G05830,AT4G15440,AT5G50130,AT1G42990,AT5G57887,AT3G60930,AT5G44790,AT1G47860,AT2G03810,AT5G15500,AT1G26960,AT2G23760,AT4G05136,AT2G03620,AT2G45920,AT5G15802,AT1G27300,AT3G14370,AT5G15080,AT5G47500,AT3G21175,AT4G37240,AT2G45770,AT1G33811,AT3G44320,AT2G28610,AT1G53110,AT5G59350,AT1G53230,AT4G21490,AT1G76880,AT3G13310,AT5G56490,AT5G47250,AT1G18320,AT2G40250,AT4G09550,AT4G24140,AT3G10190,AT2G21780,AT5G37030,AT4G37520,AT5G62100,AT2G46010,AT1G18040,AT3G22530,AT2G30890,AT3G17070,AT3G09350,AT5G22700,AT5G63130,AT3G59530,AT4G17770,AT3G14760,AT2G23430,AT1G12280,AT1G28230,AT5G16230,AT1G04920,AT3G44770,AT1G26180,AT3G15530,AT1G75520,AT1G33080,AT4G21690,AT2G04570,AT1G03650,AT5G63430,AT3G29810,AT3G57600,AT1G34580,AT2G47940,AT4G04130,AT3G44960,AT1G50060,AT3G07330,AT4G36990,AT5G09390,AT2G23560,AT2G14500,AT3G62050,AT3G26800,AT1G27420,AT2G01950,AT3G07010,AT2G16090,AT1G67900,AT5G66350,AT2G39290,AT2G38120,AT5G63460,AT5G43160,AT4G31620,AT2G31070,AT3G52410,AT2G35585,AT3G23410,AT1G73010,AT2G08986,AT5G67300,AT4G33430,AT1G28210,AT1G47760,AT4G37570,AT5G01075,AT2G44170,AT1G69180,AT5G50740,AT5G16570,AT3G44800,AT1G55380,AT1G22370,AT2G01150,AT1G08310,AT4G07650,AT1G77870,AT5G36010,AT2G22610,AT3G08860,AT5G11460,AT1G27760,AT3G21430,AT5G37790,AT1G11850,AT5G15530,AT1G10610,AT1G14450,AT5G33370,AT1G73670,AT3G19010,AT2G28410,AT3G63140,AT3G55660,AT3G53950,AT1G56170,AT1G01030,AT1G09340,AT3G16380,AT2G36000,AT4G29390,AT2G26870,AT5G04020,AT3G10405,AT1G62270,AT1G19640,AT3G14190,AT1G70710,AT1G31210,AT2G26010,AT4G23000,AT2G28070,AT2G45190,AT3G15650,AT1G67920,AT5G08070,AT3G17930,AT2G25750,AT5G65040,AT3G12760,AT4G22753,AT3G26744,AT1G52620,AT1G52910,AT1G04650,AT5G23490,AT3G56260,AT5G62920,AT5G37460,AT1G53560,AT1G01430,AT5G35860,AT3G44510,AT3G06060,AT2G14660,AT5G05580,AT2G20890,AT4G27890,AT3G57200,AT3G59200,AT5G56730,AT4G23810,AT1G69523,AT2G39730,AT5G14010,AT5G42870,AT5G03455,AT4G00490,AT1G08650,AT4G30350,AT3G32917,AT4G03400,AT1G16960,AT1G26600,AT5G01600,AT1G71696,AT5G35930,AT5G20360,AT1G03040,AT1G74200,AT3G44500,AT3G23605,AT3G43810,AT3G15820,AT3G17100,AT2G36660,AT4G15160,AT1G25580,AT4G15093,AT1G69600,AT4G29270,AT3G50630,AT1G65295,AT2G42990,AT2G01420,AT1G10060,AT1G58310,AT4G32000,AT1G15210,AT3G50930,AT3G16750,AT5G01040,AT3G45010,AT1G25340,AT3G25240,AT2G19950,AT3G12590,AT1G80510,AT1G12860,AT5G38530,AT1G03180,AT5G25980,AT4G03175,AT4G20270,AT2G36430,AT1G71970,AT4G19420,AT2G30490,AT4G22230,AT5G01220,AT2G47760,AT5G56550,AT3G05000,AT5G26000,AT5G24150,AT5G31770,AT2G30540,AT5G13730,AT5G61120,AT3G56300,AT5G49890,AT2G43490,AT3G53760,AT5G57670,AT1G51270,AT5G01400,AT2G23200,AT4G14650,AT4G36150,AT4G10260,AT2G33640,AT4G20720,AT3G04290,AT1G72430,AT1G06390,AT1G35660,AT4G00180,AT3G05380,AT3G08800,AT2G26520,AT2G23010,AT3G23480,AT5G44680,AT1G21950,AT5G02620,AT5G66580,AT5G01840,AT1G26410,AT1G45150,AT1G20140,AT2G22980,AT3G15360,AT5G57090,AT1G28600,AT2G17450,AT1G01720,AT5G02940,AT1G75240,AT5G10420,AT3G46740,AT4G32520,AT1G30170,AT4G34230,AT1G07750,AT1G14180,AT1G70510,AT3G54210,AT4G31805,AT1G42680,AT3G49210,AT5G06300,AT5G19430,AT5G58520,AT5G02890,AT1G07270,AT1G65490,AT2G35500,AT4G12980,AT5G62600,AT5G60970,AT5G28380,AT2G16700,AT4G30490,AT1G10450,AT4G36640,AT2G11000,AT4G33320,AT5G55180,AT3G59210,AT1G69040,AT3G05700,AT5G18860 WELLMER_RATIOS-R1_DN Down-regulated genes Inferred from Ratios r1 (Table S2 PubmedID:16789830) AT4G27330,AT3G60640,AT4G30650,AT4G38200,AT4G32920,AT4G03320,AT4G02990,AT4G37330,AT2G18500,AT5G17250,AT4G23180,AT5G05190,AT3G23560,AT5G15930,AT3G12040,AT3G09600,AT3G27560,AT4G00040,AT3G59080,AT1G58360,AT3G19130,AT1G80360,AT5G62280,AT1G36390,AT3G29030,AT1G04010,AT3G32240,AT2G38740,AT2G39280,AT2G38620,AT4G16050,AT5G42980,AT5G23970,AT1G72930,AT1G17190,AT4G14120,AT4G09140,AT5G04100,AT1G48410,AT2G45890,AT5G10890,AT4G19430,AT3G06120,AT3G15750,AT4G34110,AT1G20530,AT3G26840,AT1G70320,AT3G25760,AT3G04550,AT3G43800,AT4G31610,AT1G04900,AT4G22540,AT3G10960,AT1G55805,AT4G18120,AT3G08680,AT1G65500,AT3G15030,AT5G24570,AT3G19750,AT3G16730,AT1G17970,AT4G18425,AT1G09415,AT2G46680,AT1G08410,AT2G28320,AT1G29320,AT1G10960,AT3G01500,AT1G20650,AT1G80640,AT5G26030,AT5G66940,AT1G04110,AT3G48620,AT4G02420,AT3G26510,AT3G46770,AT5G24460,AT1G16750,AT1G29560,AT5G59370,AT1G54060,AT5G10080,AT3G29300,AT5G65205,AT5G09970,AT3G06840,AT1G08960,AT4G37980,AT4G20130,AT3G11260,AT3G60160,AT5G66300,AT3G54780,AT2G14800,AT1G58050,AT3G19180,AT1G32800,AT5G07190,AT4G21270,AT3G62700,AT5G52520,AT1G48120,AT4G25970,AT4G15630,AT3G05980,AT1G48960,AT3G60960,AT4G18720,AT4G00340,AT5G09400,AT2G44070,AT2G20875,AT5G44620,AT3G43960,AT4G32690,AT3G57170,AT2G01310,AT2G39350,AT4G23170,AT1G54530,AT3G58220,AT1G12730,AT5G49700,AT4G29700,AT4G01330,AT3G02150,AT5G02270,AT5G48310,AT2G01670,AT1G60680,AT1G48860,AT5G18290,AT4G25000,AT3G62750,AT1G60540,AT4G23630,AT1G07260,AT5G41770,AT3G59380,AT1G30280,AT4G01410,AT4G37390,AT4G28430,AT3G59320,AT1G76620,AT1G53120,AT4G34990,AT3G61420,AT5G03830,AT1G61300,AT2G05940,AT4G18400,AT5G17710,AT5G08020,AT1G27120,AT1G56630,AT3G54810,AT3G16565,AT5G60170,AT2G13580,AT3G10525,AT1G09460,AT5G13060,AT5G18200,AT5G51520,AT5G54250,AT5G17630,AT1G52400,AT4G34420,AT3G49670,AT3G03270,AT2G35310,AT5G25150,AT1G52360,AT4G17460,AT3G58770,AT3G27690,AT2G42150,AT1G08320,AT5G25010,AT5G60250,AT2G46430,AT1G80990,AT4G16860,AT1G02940,AT3G20820,AT5G25620,AT3G54350,AT1G52980,AT1G45688,AT3G19860,AT3G17600,AT1G24180,AT1G26310,AT3G53560,AT4G03330,AT5G52950,AT2G21550,AT2G04160,AT1G26630,AT5G08260,AT5G58660,AT2G44740,AT1G76420,AT5G39570,AT3G21770,AT4G01500,AT2G47020,AT2G18020,AT5G08420,AT4G12910,AT2G38110,AT1G12080,AT2G33800,AT1G32240,AT1G68130,AT4G16370,AT4G09350,AT5G09780,AT4G18390,AT5G06980,AT2G20400,AT1G15310,AT5G64530,AT1G25250,AT5G53730,AT4G26540,AT1G60590,AT5G55900,AT3G47960,AT2G21860,AT5G65660,AT3G54110,AT1G70310,AT1G49975,AT2G27190,AT5G42630,AT4G00460,AT5G49170,AT4G37280,AT5G65590,AT3G18740,AT1G70895,AT2G27880,AT2G25170,AT4G02580,AT5G03410,AT5G06510,AT1G17455,AT2G46900,AT3G05630,AT4G27710,AT4G00150,AT5G06250,AT5G16450,AT5G50915,AT1G51805,AT1G50290,AT4G02410,AT5G62360,AT1G52190,AT3G46970,AT1G12320,AT1G02850,AT3G05180,AT5G44700,AT1G12980,AT3G29035,AT3G54530,AT2G14210,AT1G80615,AT5G38300,AT5G25460,AT1G48470,AT4G30450,AT4G29810,AT2G18510,AT4G00970,AT1G49340,AT1G16800,AT5G15670,AT1G17830,AT5G03170,AT3G30140,AT3G01860,AT1G15260,AT5G08000,AT4G13950,AT4G02360,AT5G03520,AT2G24570,AT4G14130,AT5G03990,AT5G55310,AT2G46690,AT5G57123,AT4G37080,AT1G04040,AT2G42570,AT2G39220,AT1G19830,AT2G28470,AT1G12600,AT2G26660,AT3G58760,AT5G45320,AT3G48660,AT5G43290,AT1G23380,AT3G21560,AT1G13020,AT1G35730,AT4G21200,AT2G16720,AT4G35750,AT3G06770,AT3G61250,AT5G24860,AT1G76660,AT1G32780,AT1G41830,AT1G21310,AT1G69620,AT5G39785,AT1G48660,AT1G30040,AT1G35910,AT2G36380,AT2G22680,AT1G12330,AT1G78570,AT1G31550,AT4G23830,AT5G62170,AT4G15210,AT2G16660,AT3G28930,AT4G28780,AT1G64200,AT1G72660,AT2G28140,AT1G76100,AT5G25400,AT2G32210,AT2G46330,AT2G31150,AT1G80810,AT5G48980,AT3G17290,AT5G21150,AT5G13400,AT1G61930,AT3G47295,AT5G17620,AT4G26280,AT5G01260,AT3G61950,AT1G76590,AT4G33560,AT4G12330,AT1G55690,AT4G14365,AT3G47950,AT1G56075,AT1G71695,AT2G35940,AT1G46264,AT5G59320,AT5G42530,AT5G51190,AT4G14620,AT5G01570,AT1G10360,AT3G05210,AT5G58690,AT1G29500,AT1G16490,AT1G30530,AT1G53080,AT3G27100,AT4G28490,AT2G41790,AT4G23680,AT1G56720,AT2G22960,AT3G03190,AT1G04250,AT2G21880,AT2G44940,AT5G65730,AT1G66760,AT3G14840,AT2G40970,AT1G09990,AT2G30000,AT3G55130,AT4G10265,AT2G36750,AT3G15270,AT3G49680,AT2G01890,AT3G16390,AT5G28030,AT1G21270,AT4G02530,AT3G16150,AT2G44960,AT2G47510,AT1G12845,AT2G38170,AT1G71880,AT1G78970,AT5G39860,AT3G45140,AT5G22020,AT4G12890,AT2G30370,AT1G13680,AT2G03110,AT1G23020,AT5G07990,AT4G31140,AT5G48490,AT1G65450,AT2G21640,AT4G33150,AT5G66700,AT3G17609,AT1G25230,AT4G01700,AT5G15160,AT4G38840,AT5G28400,AT5G19770,AT4G25780,AT5G02170,AT4G19380,AT1G64970,AT1G06640,AT1G67430,AT2G45870,AT5G45860,AT3G29370,AT1G07600,AT1G03820,AT5G67280,AT5G15310,AT5G02750,AT5G22460,AT4G24510,AT5G08680,AT1G60530,AT2G42100,AT5G19140,AT1G12240,AT1G53070,AT4G30180,AT2G36610,AT3G24780,AT5G45830,AT2G26170,AT3G17790,AT1G20980,AT2G19650,AT1G12880,AT3G04520,AT1G52140,AT2G40230,AT2G41070,AT3G50740,AT3G06590,AT5G23820,AT1G58430,AT2G39510,AT1G06030,AT5G06560,AT3G21420,AT1G75540,AT3G52840,AT3G56220,AT1G19770,AT5G40540,AT2G16060,AT3G05660,AT5G59305,AT4G23670,AT3G52580,AT1G66400,AT3G62740,AT4G10910,AT3G22540,AT2G34850,AT4G26320,AT4G21970,AT5G26230,AT3G02040,AT3G28690,AT1G69530,AT5G06870,AT3G22140,AT1G23800,AT5G17050,AT1G69870,AT1G62780,AT5G49760,AT4G02380,AT2G26400,AT5G09990,AT1G49830,AT1G63650,AT1G12430,AT5G43380,AT2G28810,AT5G20400,AT4G37180,AT3G61490,AT3G58210,AT3G05030,AT4G04690,AT1G73370,AT5G51870,AT3G53310,AT5G08565,AT2G26740,AT5G55620,AT3G48670,AT4G31910,AT3G18000,AT5G35670,AT5G01870,AT4G13510,AT1G79620,AT5G67020,AT2G45420,AT1G69850,AT4G21850,AT4G39480,AT5G18560,AT1G50460,AT1G44100,AT1G56660,AT1G77380,AT2G04795,AT2G01990,AT3G24520,AT2G47930,AT3G23810,AT1G29460,AT2G31390,AT3G61630,AT1G74670,AT5G23000,AT2G07680,AT1G02340,AT3G25500,AT4G03050,AT1G04360,AT3G48740,AT2G38995,AT1G67870,AT3G14395,AT5G60800,AT2G33480,AT2G42820,AT1G80050,AT1G23090,AT5G10300,AT2G02320,AT4G16560,AT3G54140,AT3G22560,AT3G01680,AT2G34490,AT5G03150,AT3G16400,AT3G21510,AT3G02910,AT1G71050,AT1G24020,AT3G17380,AT1G15560,AT5G45630,AT5G47590,AT5G54980,AT1G20850,AT3G28570,AT1G29670,AT2G07705,AT1G03720,AT2G40130,AT1G37140,AT3G28560,AT4G21105,AT1G05760,AT5G06440,AT2G32060,AT1G21250,AT5G08250,AT2G33040,AT1G30320,AT2G45410,AT1G61190,AT1G32100,AT2G46630,AT1G21400,AT5G62165,AT3G51240,AT3G16430,AT1G27660,AT1G01140,AT4G37310,AT3G06880,AT1G60630,AT4G31890,AT1G07473,AT1G70000,AT2G41990,AT1G11520,AT1G28660,AT3G14770,AT1G70940,AT5G26250,AT1G70985,AT1G62540,AT1G23600,AT5G65410,AT1G66180,AT1G28360,AT5G65070,AT5G28650,AT5G35770,AT3G53530,AT1G35290,AT4G02520,AT4G16447,AT4G37550,AT2G31610,AT2G39570,AT1G02640,AT3G21550,AT2G30010,AT2G36870,AT5G66570,AT5G06650,AT5G40960,AT2G18660,AT2G14890,AT1G02065,AT5G57685,AT5G06670,AT2G26380,AT2G22540,AT2G22970,AT1G67730,AT2G21210,AT1G32450,AT1G43205,AT4G24540,AT1G11080,AT4G02280,AT5G39670,AT2G39660,AT5G20700,AT5G11950,AT2G37970,AT5G32460,AT5G14090,AT4G18970,AT5G14920,AT2G35290,AT1G10980,AT5G06380,AT3G29590,AT3G52480,AT1G09970,AT4G39950,AT3G11280,AT3G53280,AT2G48020,AT2G24762,AT3G26190,AT5G03760,AT1G62300,AT5G13180,AT3G24450,AT4G00810,AT4G34710,AT2G24070,AT1G25450,AT1G09812,AT5G12950,AT5G34940,AT3G19660,AT5G03790,AT5G09980,AT1G58270,AT5G50810,AT1G14700,AT1G66140,AT1G24050,AT2G38860,AT1G24735,AT4G18280,AT5G49990,AT4G23600,AT1G03170,AT4G39780,AT5G03350,AT2G41100,AT3G59270,AT1G68170,AT3G45780,AT3G51860,AT1G14580,AT1G68530,AT3G42670,AT2G34510,AT5G45340,AT4G18200,AT5G62350,AT5G04490,AT5G56950,AT1G80760,AT2G22170,AT2G43510,AT2G46410,AT5G20250,AT1G07240,AT5G07440,AT1G45191,AT1G70560,AT3G14590,AT4G11910,AT3G22550,AT3G21690,AT5G07580,AT5G53700,AT3G56400,AT5G51860,AT4G02130,AT2G24280,AT5G24560,AT3G19850,AT1G49450,AT5G12050,AT1G24530,AT3G13190,AT4G14090,AT3G50170,AT2G04063,AT4G25750,AT5G27690,AT5G08640,AT3G50280,AT1G12650,AT1G73050,AT2G38940,AT5G52580,AT4G10060,AT2G17770,AT3G11580,AT1G62870,AT3G47210,AT4G15620,AT1G67770,AT2G24560,AT1G66200,AT1G35750,AT5G58900,AT1G09390,AT5G13750,AT4G22490,AT2G44080,AT2G42200,AT5G46690,AT1G32280,AT4G39940,AT2G23950,AT3G28540,AT1G22180,AT4G01360,AT5G24800,AT5G18670,AT4G14440,AT1G15960,AT4G27300,AT2G45340,AT4G22880,AT2G03130,AT1G61120,AT3G47470,AT4G27520,AT1G26770,AT1G55810,AT3G23570,AT1G70170,AT5G64570,AT2G43520,AT1G69520,AT1G44800,AT2G22190,AT1G09750,AT4G00050,AT2G45180,AT1G25530,AT2G14900,AT5G61590,AT3G25640,AT2G23180,AT1G33700,AT4G36740,AT1G17230,AT1G26190,AT5G65140,AT3G13445,AT1G08930,AT1G79840,AT2G02130,AT5G10770,AT1G58460,AT2G28550,AT3G10720,AT5G41080,AT5G58260,AT1G77660,AT1G16850,AT1G05370,AT2G05530,AT1G67865,AT3G06020,AT3G09260,AT1G33590,AT1G76110,AT3G59845,AT5G51210,AT4G34620,AT1G02930,AT2G37260,AT1G33170,AT3G30350,AT5G23370,AT5G56320,AT4G15920,AT4G34590,AT1G21120,AT5G64870,AT3G17200,AT3G50270,AT2G45080,AT3G57780,AT4G35900,AT4G01600,AT5G06570,AT5G52320,AT2G23600,AT1G31750,AT2G31160,AT5G19120,AT2G18550,AT2G43620,AT1G17380,AT5G20430,AT3G23295,AT5G22580,AT5G53550,AT1G66940,AT5G23360,AT1G15160,AT2G23610,AT1G12200,AT4G22570,AT5G55450,AT4G05050,AT1G68740,AT4G36850,AT1G25310,AT2G38640,AT5G49360,AT5G55250,AT1G56150,AT3G28990,AT1G73550,AT5G22920,AT3G12830,AT4G19230,AT2G46650,AT5G17950,AT4G16590,AT4G17990,AT5G46730,AT1G27030,AT5G01015,AT5G37300,AT1G65980,AT4G13540,AT2G28085,AT1G03940,AT1G26210,AT1G14760,AT1G14720,AT4G25430,AT2G30750,AT1G20620,AT5G62680,AT1G09310,AT4G33790,AT2G34810,AT3G16340,AT5G42800,AT4G12440,AT2G28790,AT5G43940,AT1G67860,AT4G37540,AT3G13662,AT4G08770,AT4G32480,AT1G21130,AT4G14040,AT5G17220,AT3G12890,AT3G28650,AT5G50010,AT3G49570,AT2G10940,AT2G31980,AT1G58340,AT3G49120,AT1G06350,AT3G26200,AT1G78370,AT4G39510,AT4G23340,AT3G20380,AT5G08350,AT5G37600,AT1G06360,AT2G27420,AT3G02470,AT2G45660,AT3G17760,AT5G38940,AT1G68570,AT1G15670,AT3G43190,AT4G08780,AT3G23290,AT4G10340,AT1G72610,AT2G38310,AT3G04510,AT5G10180,AT5G14360,AT3G49110,AT2G05380,AT5G61440,AT1G66390,AT1G61810,AT3G30775,AT5G11190,AT5G46590,AT3G52590,AT2G30770,AT1G60270,AT1G27020,AT5G59310,AT5G28000,AT4G37610,AT3G44290,AT1G75900,AT3G13130,AT3G11680,AT1G19540,AT2G40205,AT1G31490,AT4G22870,AT1G31710,AT5G09220,AT5G03840,AT1G62975,AT5G28490,AT3G09630,AT2G20670,AT4G11190,AT2G19800,AT4G01970,AT1G56430,AT5G18840 WELLMER_RATIOS-R2_UP Up-regulated genes Inferred from Ratios r2 (Table S2 PubmedID:16789830) AT1G73010,AT3G54340,AT3G09922,AT4G36850,AT4G16550,AT3G02040,AT3G17010,AT5G06070,AT4G01170,AT4G31380,AT3G23130,AT1G52030,AT1G24260,AT3G43110,AT3G04290,AT4G32480,AT2G46950,AT1G16705,AT3G44510,AT2G19800,AT5G57720,AT4G21590,AT4G18960,AT1G75430,AT3G17790,AT3G61970,AT2G45180,AT1G13230,AT3G29690,AT1G67600,AT1G42680,AT1G76790,AT4G15250,AT1G08310,AT3G05630,AT5G06440,AT4G21850,AT5G01220,AT2G26400,AT5G20240,AT5G41080,AT3G22160,AT1G25230,AT5G53390,AT3G58210,AT2G38940,AT3G21560,AT3G25240,AT2G03110,AT2G23760,AT5G08250,AT2G42885,AT4G32990,AT2G37210,AT1G10060,AT4G26280,AT1G22910,AT5G38540,AT2G45190,AT2G46650,AT5G66800,AT5G08020,AT5G09470,AT4G15160,AT2G41290,AT2G39010,AT4G16270,AT3G15530,AT1G78570,AT1G52400,AT2G14890,AT5G48080,AT4G34800,AT5G20410,AT1G13680,AT1G72610,AT5G47740,AT5G08640,AT2G01310,AT5G22430,AT5G47240,AT1G17830,AT1G25250,AT1G12240,AT1G19640,AT3G44500,AT1G31210,AT5G55720,AT3G17290,AT2G24210,AT1G60530,AT1G21460,AT2G25810,AT5G28400,AT5G66570,AT3G46770,AT3G01490,AT3G03190,AT5G16030,AT1G35280,AT4G15620,AT3G43960,AT1G04240,AT4G39950,AT4G39940,AT1G73050,AT5G09570,AT1G75240,AT5G51760,AT4G24130,AT1G57560,AT5G28020,AT2G26660,AT1G05540,AT1G61190,AT3G28345,AT5G16570,AT1G35730,AT4G16370,AT5G19340,AT1G31290,AT2G35310,AT3G51240,AT5G63130,AT4G30650,AT5G23260,AT3G43800,AT4G30270,AT2G18500,AT3G44320,AT3G18000,AT4G34760,AT1G05480,AT1G70710,AT5G10770,AT1G08410,AT4G01060,AT2G38860,AT4G37400,AT4G32980,AT5G21150,AT2G44450,AT5G39220,AT2G27880,AT1G68480,AT1G76090,AT3G53560,AT1G13400,AT1G43000,AT5G13060,AT2G40250,AT1G30530,AT2G02080,AT2G42990,AT2G34810,AT2G44960,AT5G23210,AT4G00180,AT3G49760,AT1G67920,AT1G08650,AT5G17220,AT4G28160,AT1G80360,AT1G61300,AT1G49340,AT2G17450,AT1G60590,AT1G23140,AT1G47860,AT2G22960,AT1G41830,AT2G01670,AT5G22020,AT4G35750,AT1G04250,AT1G79620,AT5G01600,AT3G13310,AT5G37790,AT1G70720,AT5G57670,AT4G23000,AT1G30360,AT2G21550,AT5G01260,AT4G02670,AT5G03520,AT2G03505,AT5G49170,AT2G42410,AT4G25000,AT5G47500,AT1G47610,AT5G18290,AT5G15670,AT5G03170,AT5G49700,AT2G20670,AT2G42570,AT1G10360,AT1G60060,AT3G63450,AT1G65730,AT3G14060,AT1G10960,AT1G77110,AT2G02795,AT1G43205,AT4G34110,AT3G15170,AT5G66350,AT1G26945,AT3G17580,AT5G07240,AT1G30170,AT3G24225,AT5G22920,AT2G22610,AT5G48900,AT3G21890,AT2G28410,AT2G24570,AT3G17070,AT3G06880,AT4G14120,AT5G17050,AT5G06250,AT5G49330,AT4G03050,AT2G23180,AT2G03810,AT2G21880,AT1G15560,AT5G20110,AT4G34790,AT5G07990,AT5G65590,AT3G55660,AT4G30180,AT4G13950,AT5G26220,AT2G27190,AT5G06510,AT3G62740,AT5G01040,AT2G30490,AT4G18390,AT4G27980,AT2G42280,AT3G60930,AT5G39570,AT3G21670,AT4G37390,AT1G55690,AT5G24330,AT1G74200,AT3G23810,AT4G00460,AT5G17630,AT2G22980,AT1G17190,AT3G46670,AT2G33205,AT5G61440,AT5G20250,AT3G49210,AT1G48860,AT2G28610,AT5G07190,AT3G08680,AT3G21690,AT4G32950,AT4G32540,AT4G00970,AT1G15350,AT3G16730,AT1G16490,AT4G23630,AT3G14190,AT2G20870,AT4G16860,AT5G19770,AT2G39570,AT1G28600,AT3G15750,AT2G40475,AT3G11090,AT5G13400,AT1G26630,AT5G66300,AT4G27520,AT5G66940,AT4G18970,AT4G34420,AT5G53200,AT5G18670,AT3G56220,AT4G34230,AT1G80990,AT1G17455,AT3G53950,AT5G19430,AT1G71870,AT1G06360,AT3G45780,AT5G15080,AT1G60270,AT4G23830,AT5G06870,AT5G55180,AT1G02065,AT1G63650,AT5G49890,AT3G54210,AT5G24570,AT1G02190,AT5G14920,AT5G65170,AT2G46720,AT2G42200,AT5G23820,AT1G63420,AT5G02890,AT2G39290,AT2G37880,AT5G55900,AT3G50170,AT4G13510,AT4G15630,AT5G50915,AT5G24460,AT5G63460,AT3G47470,AT2G46330,AT5G26230,AT2G47510,AT2G13580,AT1G69530,AT3G55130,AT5G62600,AT3G19180,AT4G03400,AT1G03820,AT3G09260,AT5G57270,AT1G01030,AT4G09030,AT4G26120,AT3G12760,AT3G54960,AT3G10960,AT4G37800,AT4G34990,AT2G04570,AT1G56170,AT1G30040,AT3G19750,AT1G21310,AT5G02270,AT3G29300,AT3G44770,AT4G37980,AT5G24670,AT4G30110,AT2G38740,AT1G80200,AT5G62100,AT2G40670,AT4G12440,AT5G56950,AT5G01840,AT3G48460,AT5G08260,AT3G55290,AT3G06060,AT3G51860,AT1G70320,AT3G14770,AT3G61250,AT5G24860,AT1G14180,AT3G11000,AT5G62350,AT3G05000,AT2G32610,AT5G25460,AT1G07500,AT5G15530,AT3G46740,AT3G10190,AT4G24140,AT3G49680,AT3G12610,AT1G50060,AT5G10970,AT1G13020,AT3G20820,AT2G38110,AT4G05050,AT1G02610,AT5G11070,AT5G14360,AT1G26190,AT1G15210,AT1G33170,AT3G09600,AT1G71880,AT1G11000,AT1G12330,AT3G59380,AT2G45870,AT5G16600,AT5G01075,AT2G14500,AT5G02940,AT1G04010,AT5G03760,AT5G46730,AT1G78860,AT1G75440,AT2G33800,AT3G12830,AT2G41510,AT3G13010,AT1G30650,AT4G00490,AT1G08960,AT1G58430,AT3G22140,AT5G61120,AT1G44800,AT5G06980,AT5G03830,AT2G38620,AT1G53080,AT4G17770,AT1G24590,AT1G36390,AT5G18200,AT4G37310,AT1G53070,AT3G53310,AT5G15210,AT4G36920,AT1G09570,AT4G20260,AT1G04040,AT5G62280,AT1G19830,AT1G03040,AT2G18120,AT4G09350,AT4G36540,AT5G49990,AT2G01150,AT3G24140,AT2G23010,AT1G23020,AT1G09990,AT3G10525,AT1G71970,AT4G26540,AT4G24150,AT5G09390,AT1G30840,AT5G20360,AT1G55380,AT1G65490,AT3G29370,AT5G54250,AT3G02470,AT2G10940,AT5G26030,AT5G13330,AT4G12910,AT1G69870,AT5G05580,AT4G39780,AT2G24560,AT2G28320,AT5G32475,AT4G00150,AT3G49670,AT1G07270,AT1G18320,AT2G33480,AT5G41770,AT1G20020,AT4G11190,AT1G30100,AT3G05980,AT3G49260,AT4G05240,AT1G76660,AT1G80615,AT1G72100,AT5G03350,AT2G31610,AT1G15670,AT3G29030,AT4G35900,AT3G26744,AT4G16050,AT3G58220,AT1G69523,AT4G24700,AT1G16960,AT1G02340,AT1G72660,AT5G48310,AT5G62230,AT2G23560,AT5G44620,AT1G10450,AT5G08680,AT2G33530,AT1G04360,AT1G15360,AT3G15030,AT4G00500,AT1G04110,AT3G05180,AT3G08860,AT4G33320,AT1G33590,AT5G09400,AT1G62870,AT4G10265,AT1G25450,AT3G54810,AT4G22230,AT3G17930,AT1G80460,AT5G67020,AT5G03790,AT4G37280,AT4G15210,AT5G01520,AT3G52580,AT3G61150,AT2G31070,AT5G50130,AT1G75140,AT4G12980,AT1G72430,AT2G22680,AT1G74430,AT1G48660,AT1G27540,AT1G53230,AT5G36010,AT5G34940,AT1G73190,AT4G37080,AT5G10080,AT2G16090,AT4G14040,AT2G41950,AT4G27280,AT1G29500,AT3G45010,AT1G18040,AT1G42990,AT2G41990,AT5G01400,AT2G34340,AT4G02130,AT4G37740,AT5G56730,AT3G60160,AT3G16150,AT5G52520,AT2G26520,AT5G53430,AT2G19310,AT2G39280,AT4G02360,AT1G70940,AT1G45688,AT5G47250,AT3G04550,AT1G62975,AT5G38530,AT3G50270,AT1G03180,AT1G52910,AT2G16720,AT4G29810,AT2G18510,AT5G64530,AT4G36740,AT1G70510,AT2G07705,AT3G06840,AT3G17640,AT2G44070,AT1G22370,AT3G61490,AT1G55330,AT5G06530,AT3G09630,AT1G11850,AT4G38200,AT4G20720,AT4G29270,AT4G12330,AT1G70560,AT3G63140,AT2G36430,AT1G16800,AT1G70000,AT5G52320,AT2G03620,AT3G57200,AT2G19950,AT1G30260,AT5G31770,AT4G01330,AT5G38300,AT1G13080,AT4G37240,AT5G18860,AT5G22940,AT1G08320,AT1G30320,AT1G21950,AT1G16750,AT4G21480,AT3G07010,AT3G30775,AT5G41050,AT5G01610,AT3G32917,AT5G17250,AT2G41790,AT5G51800,AT5G60170,AT1G76880,AT3G42670,AT2G31390,AT4G28430,AT4G37330,AT2G28070,AT1G28360,AT4G33000,AT5G17710,AT5G13750,AT5G25470,AT5G39630,AT4G32000,AT5G25980,AT2G42100,AT3G06770,AT3G30140,AT5G04490,AT4G21200,AT4G09140,AT3G27690,AT1G29670,AT3G15820,AT1G27760,AT5G01870,AT5G64570,AT4G31140,AT4G38400,AT1G14920,AT1G14580,AT4G38860,AT3G20180,AT4G39480,AT1G48410,AT4G33430,AT1G71230,AT1G68570,AT2G14800,AT2G35290,AT5G44680,AT3G01860,AT2G44170,AT3G59200,AT1G76620,AT3G25760,AT1G09310,AT2G39730,AT2G25170,AT1G48120,AT1G11520,AT1G68640,AT5G55430,AT5G53730,AT2G36750,AT5G35930,AT5G25150,AT1G06420,AT3G30180,AT2G38120,AT1G68710,AT4G19230,AT3G59530,AT2G08986,AT2G04160,AT1G66390,AT3G23480,AT1G64060,AT5G50810,AT4G19380,AT1G07750,AT5G20630,AT5G49360,AT4G21490,AT2G26170,AT1G06640,AT5G05190,AT4G36640,AT2G47940,AT4G31610,AT5G01570,AT5G56490,AT1G80760,AT1G69600,AT3G53140,AT5G37300,AT2G38995,AT2G47760,AT5G19120,AT4G00050,AT1G49975,AT2G46010,AT4G27890,AT3G23290,AT2G01520,AT4G22753,AT4G14440,AT5G09780,AT3G25130,AT4G19430,AT1G27120,AT2G35585,AT2G33040,AT5G06300,AT1G20980,AT2G37260,AT4G02580,AT5G63430,AT3G14840,AT1G14720,AT1G69180,AT3G23570,AT1G23380,AT5G03410,AT5G05810,AT3G12040,AT1G56720,AT2G11000,AT5G62360,AT1G27660,AT5G60250,AT1G10610,AT5G58520,AT3G23410,AT4G16265,AT4G36150,AT1G07473,AT3G53760,AT3G52410,AT4G28780,AT1G73670,AT3G11280,AT2G05940,AT4G32520,AT5G23970,AT4G24510,AT1G67900,AT4G25780,AT3G03450,AT1G09460,AT4G05136,AT5G24150,AT2G23950,AT1G78370,AT2G24280,AT5G11160,AT2G36870,AT3G08800,AT2G34490,AT4G01500,AT1G79840,AT5G35860,AT1G14700,AT4G23050,AT4G33010,AT5G11460,AT3G54350,AT4G02530,AT1G15260,AT5G37460,AT2G21860,AT5G04880,AT5G44580,AT1G29460,AT5G26000,AT5G46690,AT2G03710,AT1G70310,AT3G60670,AT5G17620,AT1G12845,AT3G56300,AT5G66580,AT4G32690,AT3G57170,AT3G12590,AT2G30000,AT4G16160,AT5G13730,AT3G59690,AT1G11210,AT3G43810,AT2G47020,AT1G32780,AT1G80510,AT1G66940,AT1G31550,AT3G47960,AT2G21780,AT2G42150,AT4G30350,AT1G03940,AT4G32920,AT4G12850,AT3G62050,AT3G61420,AT3G26500,AT3G53280,AT4G14620,AT3G26840,AT1G30950,AT1G76100,AT5G58660,AT3G53530,AT1G71695,AT3G50630,AT5G15430,AT5G20830,AT4G01700,AT5G05830,AT5G09990,AT5G12950,AT5G60970,AT3G17100,AT1G10540,AT2G35500,AT3G01500 WELLMER_RATIOS-R2_DN Down-regulated genes Inferred from Ratios r2 (Table S2 PubmedID:16789830) AT2G34510,AT5G44790,AT1G74040,AT1G20160,AT4G33150,AT2G20890,AT4G01410,AT3G24520,AT2G16660,AT2G01420,AT5G16450,AT3G05700,AT5G55250,AT3G21420,AT4G21970,AT3G05380,AT5G09970,AT3G28690,AT4G18120,AT5G60880,AT2G47930,AT3G26960,AT1G12280,AT4G37570,AT3G02150,AT2G28140,AT3G49570,AT2G30370,AT5G02620,AT4G08770,AT5G50740,AT4G05120,AT3G21430,AT1G04650,AT1G80100,AT1G52140,AT1G65450,AT3G16565,AT3G05660,AT1G76110,AT1G58340,AT2G26870,AT1G67430,AT1G23080,AT1G56630,AT4G21270,AT4G16590,AT1G12080,AT1G34580,AT4G02990,AT3G28650,AT5G65040,AT1G04920,AT5G20810,AT1G62690,AT4G29700,AT3G16430,AT2G45890,AT5G10890,AT1G51270,AT1G09340,AT3G05160,AT3G19010,AT2G26740,AT3G46970,AT1G12650,AT3G24450,AT3G25500,AT3G05210,AT4G20130,AT1G02930,AT4G27330,AT3G26510,AT5G23490,AT3G17430,AT5G57090,AT1G68530,AT5G04020,AT3G29810,AT3G51660,AT5G39530,AT5G62680,AT5G42200,AT4G38770,AT1G67730,AT1G12860,AT2G45770,AT3G04140,AT5G59350,AT4G20040,AT1G23090,AT1G48960,AT1G69620,AT5G25010,AT1G24050,AT1G03650,AT1G26180,AT3G61630,AT5G40942,AT1G64680,AT1G52620,AT3G16380,AT4G18400,AT1G54530,AT3G57600,AT1G47485,AT5G48490,AT1G28230,AT4G19420,AT5G65410,AT3G09350,AT3G54780,AT5G10420,AT5G08000,AT4G37550,AT5G57685,AT2G01430,AT5G15310,AT4G09550,AT1G77855,AT1G70985,AT3G27560,AT1G34245,AT1G66180,AT4G25430,AT3G23295,AT1G26600,AT4G03320,AT3G50280,AT4G18720,AT5G28030,AT1G01430,AT1G21120,AT5G35770,AT1G01720,AT4G36990,AT5G45320,AT1G02940,AT4G14650,AT2G38430,AT1G12730,AT4G16560,AT1G29320,AT3G51895,AT5G57887,AT2G18020,AT3G16750,AT1G75900,AT4G02420,AT3G22370,AT5G20700,AT1G32800,AT1G61260,AT5G43160,AT4G22950,AT1G69520,AT2G07680,AT5G51070,AT2G43490,AT3G04520,AT4G15440,AT3G26190,AT1G19690,AT3G15300,AT3G13480,AT1G71050,AT3G06590,AT1G06520,AT5G03150,AT5G08350,AT4G11910,AT2G28470,AT3G21175,AT3G22530,AT3G61950,AT2G33640,AT1G01140,AT4G33710,AT3G17600,AT4G16780,AT3G44960,AT4G30410,AT4G00040,AT2G26380,AT1G53110,AT3G16340,AT1G76420,AT1G45150,AT3G47295,AT4G37520,AT2G36000,AT1G65295,AT4G22880,AT1G07430,AT1G67770,AT1G51805,AT4G15765,AT4G34590,AT5G07440,AT5G28650,AT3G17609,AT3G11580,AT2G40130,AT3G07330,AT3G14760,AT2G27250,AT1G02640,AT1G60630,AT1G26960,AT1G19770,AT4G10340,AT1G75520,AT1G17230,AT3G62750,AT2G22970,AT2G42960,AT1G64970,AT3G29590,AT1G20650,AT5G47590,AT3G03270,AT3G14840,AT4G04690,AT2G02130,AT3G28560,AT1G55805,AT4G39170,AT4G23810,AT1G37140,AT1G73370,AT2G39220,AT4G23180,AT4G05380,AT1G55810,AT4G31910,AT2G01990,AT1G07260,AT3G05030,AT3G59080,AT4G07650,AT1G45191,AT2G38170,AT1G78970,AT5G42870,AT2G36660,AT4G37610,AT1G14030,AT1G56430,AT1G28210,AT4G23400,AT3G17200,AT1G09750,AT2G32060,AT1G71696,AT1G80640,AT5G24800,AT1G70790,AT2G01890,AT2G45660,AT3G27100,AT3G19850,AT2G31730,AT1G11710,AT4G15093,AT1G15960,AT5G20400,AT1G56075,AT2G36380,AT1G66400,AT2G42830,AT1G61930,AT5G01200,AT1G24530,AT4G21690,AT5G56550,AT5G02750,AT2G20875,AT3G15210,AT5G23370,AT5G28380,AT5G50010,AT1G13600,AT1G75540,AT2G38640,AT5G01015,AT1G68130,AT1G31490,AT5G35670,AT5G64350,AT5G25620,AT1G47760,AT5G66700,AT5G55620,AT3G17380,AT1G49450,AT2G30890,AT5G04100,AT4G21560,AT2G25750,AT5G14010,AT1G24180,AT5G39860,AT5G24560,AT3G48620,AT1G14450,AT4G27300,AT5G37030,AT5G23360,AT1G25580,AT1G67870,AT2G46630,AT1G73590,AT5G51520,AT5G53700,AT1G21130,AT4G23600,AT2G48020,AT5G39760,AT3G54110,AT3G50740,AT5G65205,AT3G13445,AT1G03720,AT2G40970,AT1G50290,AT1G23800,AT1G27300,AT2G23430,AT2G28605,AT5G45630,AT2G11260,AT3G29035,AT2G14900,AT4G01970,AT1G07240,AT3G10405,AT3G20380,AT1G69850,AT5G61850,AT5G51890,AT1G35660,AT3G13662,AT3G06270,AT4G15920,AT1G20140,AT4G00340,AT2G17770,AT1G73550,AT4G20270,AT4G17460,AT2G43840,AT4G21105,AT3G52480,AT1G26770,AT1G22180,AT3G62700,AT1G58360,AT2G28550,AT1G09390,AT3G56400,AT2G25790,AT4G31890,AT5G51190,AT2G45340,AT1G20620,AT4G18200,AT3G48660,AT1G28590,AT4G08780,AT5G06650,AT4G37685,AT1G25530,AT3G52840,AT3G44800,AT3G15360,AT4G25750,AT2G31150,AT3G32240,AT5G08565,AT3G45140,AT2G19650,AT1G25340,AT5G45340,AT5G15500,AT5G18840,AT5G09220,AT5G08420,AT5G54980,AT2G18550,AT3G19860,AT3G28570,AT1G06030,AT3G19130,AT5G03455,AT1G09812,AT1G80080,AT5G48980,AT5G11950,AT2G22190,AT5G27690,AT5G06570,AT4G14090,AT3G04510,AT1G05760,AT1G64625,AT1G12320,AT4G31805,AT2G14660,AT3G21770,AT2G27420,AT5G51630,AT1G60540,AT3G06120,AT1G35910,AT5G33370,AT5G43380,AT3G12890,AT4G25100,AT5G22580,AT4G39510,AT3G52590,AT5G57123,AT1G15160,AT3G23605,AT4G23680,AT1G17970,AT1G50460,AT1G29560,AT3G28540,AT5G62920,AT1G49830,AT3G13190,AT3G54140,AT1G25310,AT3G57720,AT3G47950,AT5G13180,AT3G49110,AT5G07580,AT3G15720,AT3G60640,AT1G36940,AT2G40230,AT4G01480,AT4G29390,AT5G39785,AT2G16700,AT5G55310,AT4G25990,AT1G70895,AT1G48470,AT1G58460,AT5G56320,AT1G52360,AT5G06560,AT1G64200,AT1G06350,AT1G58050,AT4G02410,AT4G37180,AT2G14210,AT5G06380,AT4G14130,AT3G01680,AT1G22710,AT1G77660,AT5G62165,AT2G05530,AT2G39660,AT5G20460,AT1G55110,AT1G21400,AT4G08950,AT4G22540,AT2G21210,AT1G62300,AT5G58690,AT5G42980,AT5G12050,AT1G04900,AT5G49760,AT1G26210,AT1G35750,AT4G34710,AT2G37640,AT5G37600,AT5G42630,AT5G11190,AT3G22550,AT1G33080,AT5G53550,AT2G26150,AT5G09980,AT5G26250,AT4G38840,AT1G80730,AT4G04130,AT1G23600,AT5G08070,AT2G06025,AT3G21550,AT5G61590,AT3G19990,AT2G37970,AT1G06390,AT5G46590,AT3G14395,AT1G67860,AT4G13540,AT3G10720,AT1G33811,AT4G08850,AT1G10980,AT3G11230,AT1G53120,AT4G03175,AT3G19660,AT2G05380,AT3G58760,AT2G45080,AT2G39510,AT1G12430,AT2G38340,AT1G12200,AT1G77870,AT2G43620,AT1G02850,AT3G09440,AT5G44700,AT5G43290,AT2G46430,AT4G18280,AT5G42800,AT1G52980,AT1G69040,AT1G61810,AT1G32450,AT5G52950,AT4G26320,AT1G32240,AT4G25620,AT3G58770,AT4G27710,AT4G31620,AT1G20530,AT3G50800,AT4G18425,AT2G24070,AT1G05370,AT3G26200,AT3G24780,AT4G33790,AT1G78440,AT1G08180,AT2G46900,AT4G24540,AT1G32100,AT4G25970,AT2G46410,AT3G59210,AT5G60800,AT3G47210,AT5G40540,AT2G23600,AT1G09415,AT2G23200,AT4G02630,AT4G23340,AT5G22460,AT5G32460,AT2G31980,AT5G58900,AT5G08150,AT5G23000,AT4G01360,AT4G22870,AT4G10910,AT1G24735,AT2G31160,AT2G02320,AT1G26310,AT2G38870,AT5G22700,AT1G77380,AT2G24762,AT3G56260,AT3G14590,AT1G54060,AT3G59320,AT1G27030,AT3G26800,AT5G19140,AT5G40960,AT3G15650,AT2G35940,AT3G15270,AT2G30750,AT4G33560,AT4G22570,AT4G03330,AT1G16850,AT1G17380,AT5G52580,AT1G70170,AT3G57810,AT5G67300,AT1G60680,AT1G69560,AT4G01600,AT2G43510,AT1G20850,AT2G46680,AT3G23560,AT1G66760,AT3G22540,AT4G30450,AT1G80580,AT3G28990,AT1G14760,AT1G49230,AT4G34810,AT3G16390,AT5G15802,AT5G10300,AT1G21250,AT5G15930,AT1G27420,AT1G80810,AT2G22170,AT3G11260,AT2G01950,AT2G28810,AT4G10060,AT1G80050,AT3G14370,AT2G18660,AT5G38940,AT5G03990,AT5G10180,AT3G59845,AT1G15310,AT1G12980,AT1G66140,AT5G51210,AT3G11680,AT1G62270,AT4G37540,AT2G44940,AT2G45920,AT4G16447,AT5G67280,AT2G39350,AT3G44290,AT3G57780,AT5G03840,AT2G44740,AT5G20430,AT5G14090,AT3G02910,AT5G64870,AT1G53560,AT5G51860,AT5G51870,AT4G30490,AT2G40205,AT1G08930,AT4G36925,AT4G34620,AT2G21640,AT2G37470,AT1G21270,AT5G17950,AT5G16230,AT2G34850,AT3G28930,AT3G60960,AT4G25170,AT2G41070,AT1G26410,AT1G46264,AT1G24020,AT5G45830,AT1G58310,AT2G20400,AT1G61120,AT1G12600,AT3G17760,AT1G62780,AT1G28660,AT2G17950,AT1G31710,AT3G16400,AT1G72930,AT5G65730,AT5G65660,AT1G58270,AT1G76590,AT3G06020,AT5G59320,AT4G28490,AT5G65140,AT4G34970,AT4G10260,AT2G30010,AT2G46690,AT5G02170,AT1G68170,AT1G44100,AT3G54530,AT5G45860,AT4G23170,AT2G38310,AT1G09970,AT2G36610,AT1G11080,AT1G19540,AT1G67865,AT5G43870,AT1G12880,AT3G26210,AT5G43940,AT2G23610,AT3G21510,AT1G65980,AT3G13130,AT2G44080,AT4G02520,AT1G56660,AT1G56150,AT2G43670,AT1G66200,AT3G29970,AT1G68740,AT2G32210,AT3G48670,AT1G62540,AT3G59270,AT3G60890,AT2G03130,AT1G03170,AT1G30280,AT1G52190,AT5G55450,AT3G18740,AT5G28490,AT3G25640,AT3G30350,AT1G68320,AT2G42820,AT5G15160,AT3G48740,AT2G43520,AT4G02280,AT2G30540,AT5G59305,AT5G06670,AT1G35290,AT3G50930,AT2G16060,AT2G04063,AT5G25400,AT5G28000,AT1G24575,AT1G74670,AT1G31750,AT5G65070,AT2G04795,AT1G65500,AT1G07600,AT4G23670,AT2G22540,AT4G02380,AT5G62170,AT5G42530,AT4G22490,AT4G00810,AT1G27020,AT1G33700,AT5G59370,AT2G45420,AT5G59310,AT4G12890,AT3G56360,AT2G30770,AT2G28790,AT3G48640,AT2G26010,AT3G22560,AT3G49120,AT2G41100,AT2G28085,AT4G17990,AT5G39670,AT5G18560,AT4G14365,AT2G45410,AT3G43190,AT1G32280,AT1G45688 WELLMER_RATIOS-R3_UP Up-regulated genes Inferred from Ratios r3 (Table S2 PubmedID:16789830) AT4G23600,AT3G02150,AT1G72610,AT1G15260,AT2G26400,AT2G31070,AT5G60970,AT3G17010,AT5G26000,AT4G16590,AT5G06870,AT1G13680,AT2G22170,AT4G18970,AT5G16030,AT1G16705,AT2G20870,AT5G08260,AT3G11260,AT1G53080,AT3G08860,AT4G26280,AT5G15080,AT5G03790,AT3G17580,AT2G01520,AT5G01870,AT3G04290,AT3G21550,AT1G01030,AT5G51890,AT3G09922,AT2G10940,AT4G21200,AT2G20670,AT1G72430,AT5G39860,AT3G16430,AT4G16560,AT4G16270,AT2G40250,AT2G23180,AT2G41510,AT4G15160,AT2G30770,AT3G49570,AT1G60060,AT4G37390,AT1G57560,AT5G21150,AT4G22870,AT1G70720,AT2G45180,AT1G27030,AT1G15210,AT5G47590,AT1G19830,AT4G24150,AT3G61970,AT1G30170,AT3G55130,AT1G35730,AT2G01670,AT2G13580,AT3G23130,AT1G66940,AT1G05540,AT5G28490,AT5G44680,AT2G42570,AT3G58210,AT3G46770,AT4G37980,AT4G00180,AT3G15030,AT1G03720,AT2G25810,AT1G17830,AT4G38840,AT5G23820,AT1G76090,AT1G09310,AT1G17190,AT4G15620,AT4G01060,AT2G14890,AT2G43510,AT4G27520,AT5G42530,AT1G29670,AT1G65730,AT2G18120,AT4G12910,AT2G05380,AT2G03130,AT1G69180,AT5G18840,AT3G43960,AT4G33560,AT5G55450,AT1G75900,AT5G62100,AT5G20110,AT1G29500,AT5G07990,AT5G06560,AT4G24130,AT5G47740,AT2G28610,AT3G25240,AT2G02795,AT3G02040,AT4G38770,AT4G21850,AT3G14395,AT1G70560,AT4G33790,AT3G29030,AT4G30450,AT5G49170,AT4G30180,AT5G17220,AT3G22160,AT1G32100,AT5G01075,AT5G66940,AT1G21950,AT1G13230,AT1G58460,AT1G13400,AT2G44740,AT1G31290,AT2G06025,AT1G80360,AT3G30775,AT5G57720,AT2G11260,AT3G29300,AT5G25460,AT5G42800,AT1G68570,AT4G22230,AT3G10720,AT4G16550,AT3G23290,AT5G18290,AT4G32480,AT5G24560,AT5G03170,AT5G09570,AT5G64530,AT1G10060,AT3G05980,AT3G23295,AT1G32780,AT5G19340,AT2G42990,AT5G48490,AT1G69530,AT5G35670,AT4G36850,AT2G22960,AT5G62350,AT4G14040,AT5G08000,AT5G08070,AT5G15310,AT1G16750,AT1G02190,AT3G06770,AT4G37540,AT1G53230,AT5G24570,AT4G19430,AT1G25250,AT1G15560,AT4G26320,AT1G26770,AT3G01860,AT1G20850,AT5G06650,AT2G01150,AT4G30350,AT2G45870,AT1G74670,AT5G13330,AT1G22910,AT1G70000,AT3G26200,AT1G29460,AT3G56220,AT1G24260,AT1G41830,AT1G76620,AT5G59310,AT3G23410,AT2G19800,AT4G24700,AT4G36640,AT1G53070,AT1G08960,AT5G55720,AT1G19540,AT4G13540,AT1G56150,AT5G03350,AT1G73050,AT5G15530,AT2G40475,AT2G39010,AT1G78370,AT4G34760,AT2G30010,AT4G34590,AT4G21590,AT4G10340,AT1G44800,AT3G06840,AT3G29690,AT4G21970,AT2G23610,AT1G58430,AT4G09030,AT5G43290,AT5G62920,AT4G19380,AT3G49120,AT1G71695,AT2G21550,AT1G56430,AT3G17930,AT3G12610,AT3G50170,AT1G06350,AT3G46670,AT5G06980,AT2G45190,AT4G12890,AT5G23360,AT3G11280,AT2G21880,AT3G15270,AT5G17950,AT5G67300,AT1G76790,AT3G11090,AT5G19770,AT2G44080,AT1G21460,AT1G13080,AT5G26230,AT1G12845,AT1G77870,AT1G09460,AT1G68170,AT4G18425,AT4G02360,AT3G26744,AT5G22580,AT1G79620,AT4G01970,AT5G41080,AT1G03940,AT5G55180,AT1G47610,AT1G02340,AT1G16850,AT1G61810,AT1G33170,AT1G64200,AT4G39510,AT4G37800,AT1G68740,AT1G60590,AT3G54140,AT4G36740,AT5G65590,AT3G44510,AT5G54250,AT1G05480,AT4G30270,AT1G76110,AT5G56550,AT5G06250,AT5G62360,AT2G16660,AT2G30750,AT5G14920,AT2G46330,AT1G08650,AT2G04570,AT5G57887,AT1G09750,AT5G01015,AT4G18390,AT2G02080,AT3G26960,AT5G38530,AT5G08640,AT4G01170,AT3G29970,AT2G47930,AT5G59320,AT5G60880,AT1G66760,AT4G32950,AT1G02930,AT2G18020,AT5G22430,AT5G13400,AT4G03330,AT4G22880,AT2G28140,AT5G33370,AT5G49330,AT4G14090,AT1G67865,AT2G35290,AT3G52480,AT1G27300,AT4G03400,AT3G47295,AT1G06360,AT1G77110,AT5G09980,AT2G41990,AT5G64350,AT2G26380,AT3G09260,AT4G05240,AT5G53390,AT2G33205,AT1G04250,AT5G02270,AT1G26210,AT1G69520,AT1G23020,AT1G23600,AT4G28160,AT5G63130,AT4G32000,AT2G34810,AT3G47470,AT4G22490,AT3G12890,AT3G26510,AT2G31980,AT3G53530,AT1G12080,AT5G46690,AT2G25790,AT3G05180,AT2G42410,AT1G11000,AT5G28020,AT5G19120,AT5G23260,AT5G20630,AT4G01410,AT5G53200,AT3G48460,AT3G53310,AT2G34490,AT1G12330,AT3G43800,AT1G21120,AT1G76100,AT3G59530,AT5G24800,AT1G02065,AT3G53560,AT5G01600,AT1G08310,AT1G02850,AT1G68530,AT5G18860,AT4G34790,AT1G67430,AT5G47500,AT1G10360,AT3G14770,AT3G43110,AT4G28780,AT4G15440,AT2G26740,AT4G02670,AT3G22370,AT1G12860,AT1G60270,AT3G25760,AT3G24140,AT4G12980,AT4G30490,AT3G02910,AT4G34710,AT1G73010,AT1G22370,AT1G15160,AT1G67730,AT4G26540,AT1G80760,AT3G49680,AT5G10890,AT1G10980,AT1G27020,AT1G48470,AT1G67920,AT2G14900,AT4G14440,AT2G01890,AT4G17460,AT1G21130,AT1G71230,AT5G61590,AT1G62540,AT5G09470,AT2G28085,AT5G55620,AT2G46950,AT1G67900,AT4G37330,AT5G06530,AT2G16060,AT2G22980,AT4G25000,AT3G15170,AT4G24510,AT4G22753,AT4G10060,AT2G26150,AT5G01610,AT3G60930,AT1G56075,AT1G28660,AT1G14580,AT1G60630,AT5G47240,AT1G19640,AT5G20410,AT4G29270,AT4G32980,AT1G18040,AT1G33590,AT3G22140,AT3G52840,AT2G39570,AT1G55110,AT4G31805,AT4G13510,AT1G65450,AT5G65660,AT3G63450,AT1G15360,AT3G18000,AT4G02410,AT4G27300,AT1G77660,AT5G63460,AT1G69870,AT4G36540,AT1G20620,AT3G45140,AT1G51270,AT5G08250,AT5G57090,AT2G24210,AT3G29370,AT4G39940,AT4G20260,AT3G26210,AT3G11680,AT5G06670,AT1G20980,AT4G34230,AT4G11190,AT2G45080,AT4G19230,AT1G08320,AT2G44450,AT4G02130,AT1G31210,AT3G44320,AT2G26170,AT5G40540,AT4G15920,AT4G33010,AT1G12320,AT3G61490,AT3G54810,AT4G33710,AT1G76590,AT4G16447,AT5G41050,AT5G26220,AT3G50740,AT3G21510,AT3G15820,AT5G23210,AT1G65490,AT5G20240,AT2G39290,AT1G72930,AT5G57123,AT3G54210,AT4G26120,AT1G53110,AT2G27420,AT1G27660,AT1G24530,AT4G23170,AT2G33480,AT3G10190,AT1G46264,AT4G37610,AT1G68480,AT1G25230,AT1G50060,AT5G07580,AT2G21210,AT5G53550,AT4G03050,AT4G03175,AT5G15802,AT2G03505,AT5G06380,AT1G26945,AT4G00490,AT1G11850,AT1G26630,AT5G24860,AT2G43620,AT1G31750,AT3G15360,AT5G01040,AT4G02520,AT3G06020,AT5G23370,AT2G32210,AT2G02130,AT5G02620,AT2G26660,AT3G29590,AT3G15300,AT4G01500,AT3G61250,AT1G26600,AT2G36430,AT1G14760,AT5G11190,AT3G17070,AT1G66390,AT4G23400,AT3G24225,AT2G22680,AT2G05530,AT2G21780,AT1G15670,AT4G08950,AT3G21690,AT5G15160,AT3G24450,AT3G32917,AT3G18740,AT4G37550,AT3G23570,AT2G46430,AT1G70940,AT3G10960,AT3G08680,AT5G13730,AT4G19420,AT4G15210,AT1G70985,AT3G54340,AT5G45320,AT4G09350,AT2G01420,AT3G05700,AT2G28410,AT2G07705,AT1G25340,AT3G56300,AT5G34940,AT5G56490,AT3G03270,AT5G49990,AT5G66800,AT3G50280,AT5G16570,AT1G70710,AT3G06060,AT2G38860,AT3G25130,AT3G45780,AT4G23630,AT5G01570,AT2G42280,AT1G80510,AT1G23140,AT1G75430,AT5G65040,AT5G06510,AT1G04240,AT3G48740,AT3G50270,AT5G24460,AT5G08350,AT5G53700,AT4G08780,AT4G25620,AT3G16150,AT1G48660,AT1G07473,AT2G35310,AT5G25010,AT1G30650,AT5G03840,AT4G15630,AT3G19860,AT4G00500,AT3G01490,AT3G27560,AT4G39780,AT3G57600,AT5G02890,AT2G02320,AT2G19310,AT1G80730,AT5G20360,AT2G26010,AT2G37210,AT3G56260,AT5G61440,AT4G02380,AT3G59080,AT4G27890,AT1G71050,AT2G42200,AT4G32520,AT3G25500,AT1G08180,AT3G10525,AT3G43810,AT1G15960,AT4G37240,AT3G51240,AT1G75440,AT5G23000,AT5G57270,AT4G16050,AT5G04020,AT4G01700,AT3G07010,AT4G30650,AT5G28000,AT1G28360,AT2G45660,AT1G78570,AT2G24762,AT3G05000,AT5G51520,AT2G27250,AT3G02470,AT3G13662,AT3G26840,AT5G15500,AT5G43380,AT2G23760,AT1G80200,AT5G13750,AT1G63420,AT4G31380,AT3G11000,AT5G47250,AT3G05630,AT5G50915,AT1G64680,AT1G04920,AT1G20650,AT1G25450,AT5G13180,AT1G47860,AT3G22530,AT1G24020,AT1G32240,AT2G16700,AT2G48020,AT1G28600,AT1G04040,AT1G06640,AT3G12760,AT2G45890,AT3G32240,AT5G62280,AT5G12050,AT1G12200,AT4G00040,AT2G01990,AT1G56630,AT5G66300,AT2G34340,AT1G06030,AT1G52140,AT2G05940,AT3G60640,AT5G03760,AT5G18670,AT3G59270,AT2G36660,AT2G28605,AT4G10265,AT2G04160,AT1G03170,AT4G32920,AT3G14190,AT4G32990,AT5G04880,AT3G14840,AT1G74040,AT5G24330,AT3G61630,AT3G57170,AT5G57670,AT5G22920,AT1G31550,AT1G14700,AT3G16340,AT5G49700,AT2G38340,AT4G34800,AT1G15350,AT3G13130,AT3G53280,AT1G03180,AT1G01430,AT5G10420,AT2G32610,AT1G17230,AT1G68710,AT5G50740,AT2G43520,AT5G07190,AT5G11160,AT1G55330,AT5G25620,AT3G17380,AT5G67280,AT1G49975,AT5G60800,AT2G21640,AT1G26190,AT5G64570,AT4G22570,AT4G02580,AT5G09990,AT1G70170,AT5G65730,AT3G61150,AT3G26190,AT1G09390,AT3G62750,AT1G69523,AT5G44580,AT4G11910,AT1G73550,AT2G33800,AT5G01840,AT3G44770,AT1G74430,AT1G67600,AT1G12240,AT1G48410,AT5G05810,AT4G00460,AT1G12280,AT1G10960,AT4G16160,AT5G52320,AT1G25310,AT2G28810,AT2G38740,AT4G27330,AT5G07240,AT1G09340,AT3G28650,AT3G20820,AT1G08930,AT1G76880,AT1G31710,AT2G38310,AT1G28230,AT1G80080,AT4G33000,AT2G28070,AT3G56400,AT3G61950,AT4G16265,AT3G25640,AT2G39730,AT1G75540,AT3G51895,AT4G37310,AT2G39510,AT5G10300,AT5G58900,AT2G17450,AT1G55690,AT5G05580,AT5G49360,AT3G14060,AT5G53730,AT3G49670,AT4G34620,AT2G28470,AT3G57200,AT4G24540,AT5G09390,AT5G48900,AT5G17630,AT1G07240,AT4G38860,AT4G02420,AT5G19430,AT1G78440,AT5G02170,AT5G62165,AT1G04360,AT4G14620,AT4G08770,AT4G03320,AT2G38640,AT1G30040,AT3G51660,AT4G18280,AT5G27690,AT2G36000,AT1G30530,AT3G55660,AT4G04130,AT4G37400,AT5G65410,AT2G18500,AT5G14010,AT1G51805,AT1G49830,AT3G56360,AT5G22020,AT3G54960,AT1G67770,AT3G30180,AT1G64970,AT4G31140,AT4G32690,AT3G21560,AT1G29320,AT1G26310,AT1G74200,AT1G06520,AT2G04063,AT4G17770,AT5G67020,AT2G45770,AT1G45191,AT1G70895,AT5G37600,AT5G25470,AT5G44700,AT2G34510,AT5G01200,AT4G04690,AT3G21670,AT1G65295,AT3G23480,AT5G24670,AT5G03520,AT4G30110,AT2G40230,AT2G16720,AT5G01220,AT4G28490,AT1G42990,AT3G11580,AT2G14500,AT3G54110,AT5G20400,AT4G18120,AT1G48960,AT5G51190,AT3G44290,AT5G04490,AT3G27690,AT2G38110,AT4G16370,AT2G38620,AT4G38400,AT2G45340,AT4G36920,AT4G23680,AT2G33040,AT5G09780,AT2G18660,AT1G73370,AT4G29390,AT4G20040,AT5G22940,AT4G39480,AT5G42200,AT2G41950,AT4G39170,AT5G45860,AT2G04795,AT1G09415,AT3G30350,AT5G51760,AT4G33430,AT5G51630,AT3G28690,AT1G12880,AT3G16565,AT3G06590,AT3G01500,AT4G29810,AT2G45920,AT1G19770,AT3G57810,AT5G15210,AT1G33811,AT4G12440,AT3G24520,AT3G57780,AT1G71696,AT2G37880,AT1G64625,AT3G26500,AT3G59380,AT1G02940,AT4G18960,AT1G04900,AT3G22550,AT2G33530,AT5G06570,AT1G28210,AT3G59200,AT3G24780,AT1G62975,AT5G03990,AT3G07330,AT1G62300,AT4G02530,AT4G18400,AT3G28990,AT1G56170,AT3G21890,AT5G55250,AT5G66580,AT1G52910,AT1G55805,AT3G50800,AT5G58690,AT2G47760,AT5G24150,AT1G14720,AT1G03820,AT2G39350,AT1G80460,AT1G76660,AT3G06880,AT5G51210,AT3G19130,AT2G44940,AT3G21175,AT5G25980,AT5G59370,AT4G20130,AT5G42630,AT1G60680,AT5G17050,AT3G49110,AT2G23430,AT5G22460,AT3G17609,AT3G60160,AT1G23380,AT3G10405,AT1G32450,AT5G52580,AT1G30360,AT5G08565,AT3G29035,AT3G44960,AT2G30490,AT1G55380,AT2G43840,AT1G02640,AT5G01260,AT2G19650,AT1G24735,AT4G27980,AT1G21250,AT5G39785,AT1G58270,AT5G40960,AT1G18320,AT2G40205,AT2G24070,AT3G48620,AT5G49760,AT3G28345,AT5G65205,AT4G38200,AT1G20020,AT4G33150,AT4G14120,AT3G48670,AT3G05660,AT1G75140,AT3G20180,AT4G36925,AT1G35280,AT3G19850,AT4G39950 WELLMER_RATIOS-R3_DN Down-regulated genes Inferred from Ratios r3 (Table S2 PubmedID:16789830) AT5G35770,AT1G04110,AT3G48640,AT5G11950,AT3G16380,AT4G12330,AT1G69850,AT2G16090,AT4G25170,AT1G66400,AT2G20890,AT2G36870,AT4G18200,AT4G37080,AT2G33640,AT5G01520,AT5G53430,AT2G23010,AT2G42960,AT5G19140,AT4G25430,AT5G58260,AT1G69620,AT1G48120,AT3G60890,AT1G75240,AT3G17640,AT4G37180,AT5G37460,AT5G57685,AT1G14450,AT3G59690,AT4G23340,AT2G24570,AT5G65170,AT3G21420,AT2G35500,AT3G19990,AT1G50460,AT2G18510,AT1G26180,AT2G20875,AT2G44170,AT2G07680,AT1G27540,AT3G47210,AT4G25750,AT5G11460,AT4G10910,AT5G02750,AT3G61420,AT2G23950,AT4G01360,AT1G66200,AT1G07500,AT1G44100,AT1G24590,AT4G34990,AT2G46720,AT1G14030,AT4G00150,AT1G23080,AT5G66700,AT3G17790,AT1G07750,AT2G38430,AT3G49260,AT3G43190,AT1G03650,AT5G49890,AT2G31390,AT4G22950,AT5G28650,AT2G03620,AT5G10080,AT4G23050,AT1G61930,AT3G52580,AT5G58660,AT2G28550,AT5G20430,AT2G26870,AT4G32540,AT1G65980,AT3G17760,AT5G51800,AT1G45150,AT1G55810,AT1G78970,AT2G38170,AT5G05830,AT2G22970,AT3G05210,AT3G21430,AT4G23180,AT5G37300,AT5G56730,AT5G66350,AT5G38540,AT3G12830,AT1G33700,AT4G02990,AT4G05050,AT5G17710,AT3G06270,AT1G73190,AT3G13190,AT1G72100,AT1G17380,AT1G43000,AT3G04550,AT3G49210,AT5G59305,AT2G31730,AT5G64870,AT3G19660,AT5G08420,AT3G26800,AT3G52410,AT1G77855,AT2G37470,AT1G36390,AT2G38870,AT1G12430,AT4G27710,AT4G00050,AT2G46630,AT4G01600,AT4G23000,AT2G41070,AT1G21400,AT3G04140,AT4G09550,AT1G21310,AT2G11000,AT3G17200,AT1G70790,AT1G80100,AT3G51860,AT1G80615,AT4G37740,AT3G29810,AT2G38120,AT5G17620,AT5G55310,AT5G54980,AT5G39630,AT5G39220,AT1G32280,AT5G20250,AT2G23560,AT1G02610,AT2G28320,AT5G59350,AT5G06070,AT3G55290,AT3G42670,AT3G54780,AT5G50010,AT5G39570,AT1G20160,AT2G31160,AT1G80640,AT1G36940,AT5G18200,AT1G27760,AT3G58220,AT2G46650,AT4G37685,AT3G13480,AT4G24140,AT4G34420,AT2G27190,AT5G46590,AT3G14760,AT1G28590,AT3G63140,AT3G05030,AT5G42870,AT5G10180,AT1G73670,AT2G14210,AT3G44800,AT1G62270,AT4G17990,AT5G39670,AT2G45410,AT3G54530,AT3G17100,AT3G12590,AT1G13020,AT5G39530,AT5G66570,AT3G28570,AT1G50290,AT4G25990,AT1G07600,AT4G28430,AT5G03150,AT1G30280,AT1G70510,AT3G09630,AT5G55900,AT1G79840,AT3G15210,AT1G43205,AT3G62700,AT2G46900,AT4G16780,AT3G09350,AT1G33080,AT2G32060,AT1G66180,AT1G30260,AT3G53950,AT1G11080,AT3G58760,AT1G14180,AT1G25530,AT2G03710,AT5G28030,AT1G73590,AT4G15093,AT5G18560,AT1G65500,AT3G04510,AT3G06120,AT5G48980,AT4G12850,AT3G03190,AT1G34245,AT3G08800,AT3G57720,AT3G15530,AT5G63430,AT4G25100,AT5G62680,AT3G44500,AT5G08150,AT1G35750,AT5G15670,AT3G28540,AT2G38940,AT5G45340,AT3G50630,AT1G24050,AT3G17430,AT1G53560,AT1G01140,AT1G56720,AT2G40670,AT2G17770,AT1G05370,AT2G24280,AT5G23970,AT5G38300,AT1G19690,AT3G17290,AT3G62740,AT4G23670,AT4G05120,AT1G06390,AT5G35860,AT2G24560,AT4G35900,AT4G37280,AT3G01680,AT3G48660,AT1G09812,AT1G03040,AT4G00810,AT5G20700,AT2G26520,AT5G09220,AT3G28930,AT2G40970,AT3G13010,AT3G62050,AT3G09600,AT3G12040,AT1G52980,AT3G28560,AT5G08020,AT5G52520,AT2G30890,AT5G48310,AT2G42885,AT2G23200,AT4G21560,AT5G45630,AT5G35930,AT5G45830,AT2G31150,AT1G63650,AT2G37260,AT1G05760,AT3G16750,AT1G16490,AT4G01330,AT4G25780,AT1G09570,AT3G54350,AT4G29700,AT4G23810,AT4G14365,AT2G22190,AT5G20830,AT4G36990,AT3G15650,AT2G46690,AT4G35750,AT1G11710,AT4G21105,AT3G52590,AT2G40130,AT3G19180,AT4G33320,AT3G47960,AT1G06420,AT2G36750,AT1G66140,AT2G41290,AT3G14840,AT1G12650,AT2G47020,AT1G16960,AT5G50810,AT1G30840,AT2G18550,AT3G58770,AT3G23810,AT2G43670,AT2G23600,AT2G30540,AT4G27280,AT1G54530,AT4G31890,AT2G14660,AT3G03450,AT3G59320,AT2G01310,AT1G21270,AT1G58360,AT5G44620,AT4G15250,AT1G58340,AT3G04520,AT1G67860,AT4G14130,AT4G37520,AT3G53140,AT1G72660,AT2G42150,AT1G30950,AT2G42100,AT1G69600,AT3G27100,AT2G03810,AT4G01480,AT1G48860,AT2G42830,AT1G07430,AT2G36610,AT1G49450,AT2G28790,AT1G49230,AT3G20380,AT5G03410,AT5G51870,AT3G23560,AT5G41770,AT4G36150,AT4G10260,AT1G20140,AT5G39760,AT3G22540,AT1G10610,AT1G26410,AT1G56660,AT4G00340,AT5G11070,AT1G77380,AT5G46730,AT1G52030,AT5G43160,AT1G58310,AT3G60670,AT5G25150,AT4G31610,AT2G35940,AT4G34810,AT1G12980,AT3G14590,AT1G76420,AT3G15720,AT1G67870,AT4G18720,AT4G09140,AT2G14800,AT1G35660,AT5G55430,AT2G46410,AT1G23800,AT5G58520,AT5G42980,AT5G51860,AT5G02940,AT1G11520,AT5G65140,AT1G68130,AT3G23605,AT1G10450,AT5G07440,AT4G13950,AT1G68640,AT5G15430,AT1G69040,AT2G37970,AT1G60540,AT3G47950,AT1G34580,AT2G01950,AT1G15310,AT1G27420,AT1G04650,AT4G02630,AT1G37140,AT5G43940,AT5G62170,AT3G05160,AT4G08850,AT5G32460,AT5G51070,AT5G08680,AT1G75520,AT2G34850,AT1G07260,AT4G00970,AT1G10540,AT3G21770,AT1G71870,AT3G53760,AT2G22540,AT5G20810,AT4G34110,AT4G05380,AT5G26250,AT1G26960,AT1G64060,AT1G47485,AT5G10970,AT2G30370,AT3G05380,AT1G12730,AT3G45010,AT2G38995,AT1G11210,AT1G27120,AT1G25580,AT3G59210,AT1G30320,AT1G12600,AT1G01720,AT1G22710,AT2G39660,AT5G56950,AT1G62780,AT5G61120,AT1G04010,AT5G62230,AT5G01400,AT1G80050,AT5G16450,AT5G16230,AT5G10770,AT5G03455,AT1G53120,AT3G13445,AT5G14090,AT2G25750,AT3G13310,AT2G45420,AT5G38940,AT4G21270,AT1G71880,AT1G70310,AT5G36010,AT4G20720,AT2G47940,AT4G05136,AT5G40942,AT1G61260,AT3G46970,AT2G20400,AT2G41100,AT2G44070,AT5G13060,AT3G16390,AT1G13600,AT5G65070,AT3G59845,AT1G23090,AT3G49760,AT1G62870,AT5G26030,AT5G06300,AT2G39220,AT5G25400,AT5G37030,AT2G47510,AT1G78860,AT2G39280,AT2G22610,AT1G52400,AT1G54060,AT5G61850,AT5G28380,AT1G08410,AT2G35585,AT4G30410,AT2G19950,AT5G50130,AT1G30100,AT4G22540,AT1G35910,AT3G19010,AT3G46740,AT1G22180,AT2G27880,AT2G01430,AT1G35290,AT1G24180,AT1G17970,AT5G09970,AT5G04100,AT3G17600,AT5G23490,AT3G16730,AT1G09970,AT1G70320,AT3G16400,AT5G43870,AT2G31610,AT2G42820,AT1G47760,AT4G07650,AT2G43490,AT1G52620,AT4G21690,AT4G02280,AT1G16800,AT3G09440,AT2G17950,AT1G61120,AT5G09400,AT5G28400,AT4G25970,AT5G52950,AT5G37790,AT5G16600,AT4G21490,AT1G80990,AT1G20530,AT5G15930,AT1G17455,AT4G31910,AT3G30140,AT4G21480,AT2G37640,AT1G14920,AT3G15750,AT3G14370,AT4G31620,AT5G60170,AT2G08986,AT5G22700,AT4G34970,AT1G29560,AT4G15765,AT5G44790,AT3G11230,AT1G80810,AT2G41790,AT1G80580,AT1G69560,AT5G03830,AT1G07270,AT2G46680,AT5G05190,AT2G25170,AT3G50930,AT4G20270,AT4G37570,AT1G58050,AT1G52360,AT1G31490,AT1G68320,AT1G71970,AT5G31770,AT3G22560,AT3G60960,AT5G14360,AT5G56320,AT1G62690,AT5G32475,AT4G23830,AT5G60250,AT1G52190,AT5G17250,AT2G03110,AT4G14650,AT3G19750,AT1G49340,AT1G24575,AT1G61190,AT5G06440,AT2G21860,AT1G61300,AT4G16860,AT2G46010,AT5G20460,AT1G32800,AT2G36380,AT5G48080,AT1G09990,AT2G44960,AT5G62600,AT1G60530,AT2G30000,AT1G42680,AT5G12950,AT3G51660 WELLMER_RATIOS-R4_UP Up-regulated genes Inferred from Ratios r4 (Table S2 PubmedID:16789830) AT2G11260,AT4G22870,AT3G45140,AT4G37980,AT5G12950,AT4G22880,AT4G23600,AT3G06120,AT4G05240,AT2G01520,AT4G14090,AT5G25980,AT5G42800,AT2G40670,AT4G16270,AT3G52840,AT3G56220,AT3G04290,AT5G20630,AT1G27030,AT5G06560,AT2G43510,AT1G05540,AT3G25760,AT3G46670,AT1G70720,AT1G53080,AT5G55720,AT5G24560,AT3G02150,AT5G20460,AT5G60970,AT1G48660,AT4G19380,AT2G22170,AT1G15260,AT5G64350,AT4G23670,AT1G02930,AT2G42830,AT4G31805,AT5G60880,AT5G39860,AT1G69180,AT5G08260,AT3G29590,AT5G08070,AT2G25790,AT4G18970,AT4G23680,AT1G66400,AT1G56075,AT1G06640,AT5G26000,AT5G09780,AT2G45890,AT5G28020,AT1G01030,AT2G37470,AT1G66390,AT1G58430,AT2G20870,AT3G11260,AT1G34245,AT2G23560,AT2G36430,AT1G34580,AT4G25620,AT1G56630,AT5G17220,AT1G12845,AT1G03940,AT1G66940,AT3G29030,AT4G16560,AT5G62360,AT1G15360,AT4G22753,AT3G26960,AT2G23010,AT3G54140,AT4G15440,AT3G06880,AT4G03050,AT5G15500,AT3G55130,AT5G48490,AT5G03790,AT2G01420,AT1G12860,AT4G12980,AT1G75900,AT1G76090,AT1G24020,AT1G32780,AT2G44740,AT3G09922,AT1G80080,AT2G34810,AT3G57600,AT3G14760,AT1G45191,AT1G80360,AT1G28600,AT2G31070,AT1G72430,AT3G10720,AT5G50130,AT5G57090,AT4G26540,AT5G55450,AT5G10890,AT4G04130,AT3G23410,AT2G06025,AT5G16030,AT2G26400,AT1G04920,AT3G17580,AT5G01610,AT3G46770,AT1G25340,AT5G62350,AT3G47295,AT1G69530,AT5G07990,AT4G16050,AT2G42960,AT5G13400,AT1G77870,AT5G66580,AT3G17930,AT4G38840,AT3G15030,AT3G17640,AT5G62280,AT2G21550,AT5G14010,AT3G43960,AT1G53230,AT3G61970,AT5G25620,AT4G38860,AT5G56490,AT4G26120,AT1G12320,AT5G01570,AT4G33790,AT5G44680,AT1G70940,AT5G01600,AT3G26800,AT1G19830,AT4G39950,AT4G32000,AT2G28470,AT1G30170,AT3G12610,AT3G05980,AT5G57123,AT2G41510,AT4G24150,AT5G24570,AT1G33170,AT1G65490,AT5G18840,AT1G13230,AT1G22910,AT3G11280,AT2G10940,AT3G07010,AT5G59320,AT5G21150,AT1G22370,AT3G26744,AT5G62920,AT2G40250,AT1G26945,AT2G01890,AT1G02850,AT1G12080,AT1G65450,AT4G01060,AT5G15310,AT2G40205,AT2G36750,AT4G36640,AT1G35280,AT5G08000,AT3G10960,AT5G55180,AT1G72610,AT5G06980,AT1G76620,AT4G36925,AT1G20650,AT5G47500,AT1G17190,AT3G50800,AT2G46720,AT5G44700,AT5G54250,AT2G31980,AT5G38530,AT3G15270,AT1G67430,AT1G16705,AT2G03130,AT5G33370,AT1G41830,AT3G25130,AT1G56720,AT5G42980,AT1G44100,AT2G21880,AT1G60060,AT4G37800,AT1G62780,AT2G26150,AT2G23180,AT5G03760,AT1G23020,AT4G18425,AT4G14650,AT2G04570,AT1G49975,AT3G44770,AT2G42990,AT4G02420,AT1G29500,AT3G56260,AT2G14900,AT4G29700,AT5G20110,AT4G21200,AT4G28160,AT1G60590,AT4G29270,AT5G46690,AT3G24140,AT3G29370,AT1G21950,AT3G30775,AT5G37460,AT1G62540,AT3G59530,AT4G37390,AT4G00490,AT2G14660,AT3G21550,AT3G60930,AT1G64200,AT3G17010,AT2G22680,AT2G40475,AT1G28230,AT5G43290,AT2G23430,AT5G06870,AT3G10190,AT5G06440,AT2G38170,AT4G39940,AT4G16160,AT3G29300,AT5G02620,AT3G05180,AT1G21310,AT5G57887,AT3G59080,AT5G15530,AT4G18390,AT3G16380,AT1G32100,AT1G25450,AT5G06530,AT2G01990,AT4G37080,AT2G35310,AT5G52580,AT1G80640,AT5G47740,AT1G65730,AT3G44960,AT3G01860,AT4G32990,AT1G04240,AT5G47250,AT4G02410,AT2G05940,AT3G23295,AT3G55290,AT1G08310,AT2G41950,AT4G37310,AT1G13080,AT3G30180,AT4G38770,AT5G47240,AT4G24130,AT1G68710,AT2G02795,AT2G28140,AT1G76100,AT2G16660,AT1G04110,AT2G18120,AT1G28590,AT1G14760,AT1G16750,AT4G14040,AT4G03400,AT5G09990,AT2G01670,AT3G23480,AT5G57270,AT5G49170,AT1G09750,AT3G54210,AT5G59350,AT4G02670,AT1G71050,AT4G01410,AT3G10405,AT4G30450,AT4G01500,AT2G42410,AT4G13540,AT5G28030,AT1G51805,AT1G03720,AT1G55110,AT1G14580,AT4G18720,AT4G28780,AT1G05480,AT4G19430,AT4G16590,AT2G46650,AT1G55380,AT5G58660,AT1G06360,AT2G22960,AT1G76880,AT3G52480,AT3G01500,AT1G31210,AT3G51895,AT3G47950,AT2G20875,AT2G39010,AT3G32917,AT1G12280,AT3G62700,AT3G26840,AT1G02940,AT5G01870,AT4G33560,AT5G26230,AT3G06840,AT3G10525,AT5G62100,AT4G21970,AT1G10980,AT5G25010,AT4G30180,AT5G08640,AT1G68570,AT1G10960,AT5G55620,AT4G30350,AT2G28790,AT5G14360,AT5G67280,AT1G80460,AT1G74670,AT3G03450,AT5G35670,AT5G41050,AT2G30010,AT2G33205,AT4G20260,AT2G04160,AT1G02340,AT1G15210,AT2G46010,AT4G01700,AT3G16150,AT5G63430,AT3G60160,AT4G24510,AT5G39785,AT3G48660,AT5G04020,AT4G09140,AT3G23560,AT5G15160,AT4G21590,AT2G01150,AT1G64680,AT3G62750,AT3G15820,AT5G48080,AT2G03505,AT4G36150,AT3G45780,AT1G55690,AT4G27890,AT1G10060,AT5G19340,AT2G34510,AT2G03110,AT5G13750,AT5G51630,AT2G44450,AT1G65295,AT4G03330,AT1G69520,AT3G32240,AT2G36000,AT4G34760,AT5G22580,AT5G10420,AT2G46430,AT5G06300,AT5G15210,AT2G25810,AT2G36660,AT2G43520,AT4G32480,AT5G45340,AT5G25460,AT2G02080,AT1G70560,AT2G28610,AT3G15210,AT5G13730,AT4G36540,AT3G62050,AT5G23370,AT1G29670,AT4G10260,AT1G13680,AT5G65590,AT4G33710,AT3G09350,AT1G69523,AT5G51520,AT4G15920,AT1G29460,AT2G37640,AT5G10180,AT3G22370,AT1G09340,AT3G50170,AT1G02190,AT3G53530,AT1G06520,AT5G15802,AT1G11850,AT5G47590,AT1G72660,AT3G61950,AT1G26210,AT4G16265,AT2G19310,AT5G25470,AT3G12760,AT1G65500,AT5G01015,AT2G45920,AT5G40960,AT2G24560,AT3G18000,AT1G31550,AT5G49760,AT1G14450,AT2G35290,AT5G05580,AT1G12330,AT3G49670,AT1G77110,AT5G13060,AT4G27330,AT4G37685,AT2G24210,AT1G50060,AT3G22530,AT3G06770,AT4G24700,AT5G53200,AT4G17770,AT1G07430,AT3G14840,AT1G76790,AT4G16550,AT1G64970,AT5G41770,AT4G20130,AT1G48470,AT4G12910,AT1G26600,AT5G50010,AT1G73670,AT3G14395,AT4G14440,AT4G23810,AT3G05030,AT5G64570,AT3G17070,AT3G15360,AT1G16960,AT1G20850,AT2G19650,AT1G08180,AT4G37330,AT4G09350,AT3G57780,AT2G05380,AT1G47610,AT4G15620,AT3G53280,AT5G01075,AT1G19640,AT5G64530,AT3G44510,AT3G29690,AT5G01400,AT5G59305,AT1G68480,AT5G40942,AT1G55805,AT4G22230,AT5G24150,AT4G26280,AT5G15080,AT1G69040,AT4G24140,AT4G00460,AT1G58460,AT1G25250,AT2G11000,AT1G07270,AT2G28605,AT4G29390,AT2G02130,AT3G58220,AT2G31610,AT2G45180,AT5G66940,AT5G22940,AT2G42885,AT3G05000,AT5G58260,AT2G33800,AT2G45080,AT2G42570,AT5G39530,AT3G05630,AT3G11090,AT3G57200,AT2G33530,AT1G42990,AT1G63420,AT1G73050,AT2G32060,AT5G18860,AT1G33811,AT4G38200,AT5G66800,AT5G08250,AT2G37880,AT3G15720,AT1G68740,AT5G34940,AT1G06420,AT1G35730,AT4G21850,AT2G32210,AT2G46330,AT2G47930,AT5G03830,AT5G67300,AT1G70000,AT1G08960,AT5G04880,AT4G08850,AT1G27300,AT5G56730,AT4G27280,AT5G58520,AT3G22160,AT2G38110,AT5G24330,AT3G53310,AT1G17830,AT4G09550,AT3G24780,AT1G53110,AT4G15160,AT1G74040,AT5G11950,AT2G02320,AT1G80810,AT2G39290,AT3G28690,AT3G47470,AT1G04900,AT2G47760,AT4G23180,AT1G08320,AT3G21430,AT2G30490,AT2G23200,AT5G61440,AT5G42870,AT3G20180,AT3G28345,AT4G00050,AT5G43160,AT1G55330,AT3G25240,AT3G50740,AT4G17460,AT5G24670,AT4G00180,AT5G66350,AT1G02610,AT3G23290,AT4G03175,AT1G67900,AT3G58210,AT4G30650,AT3G48620,AT4G32690,AT5G20410,AT5G63130,AT1G43205,AT5G23970,AT2G42280,AT2G31150,AT3G23605,AT3G24450,AT2G40130,AT3G15300,AT4G36850,AT4G34800,AT2G38620,AT3G54350,AT4G36740,AT4G35750,AT1G24260,AT5G42200,AT1G04650,AT1G14920,AT3G14060,AT2G26520,AT2G01430,AT4G22570,AT4G12850,AT2G38995,AT3G54960,AT2G34490,AT1G10610,AT1G52910,AT5G57720,AT2G03620,AT2G14500,AT1G18040,AT3G04550,AT1G03180,AT5G53430,AT3G21890,AT2G26740,AT4G00810,AT3G12040,AT2G37210,AT1G17380,AT5G06670,AT3G16430,AT4G27710,AT3G26190,AT1G09460,AT3G55660,AT5G48980,AT3G43800,AT5G03350,AT4G16370,AT3G56300,AT1G28210,AT5G49890,AT2G23760,AT1G69560,AT3G17200,AT2G39730,AT3G21510,AT1G45150,AT3G26510,AT5G58690,AT5G07240,AT2G07705,AT3G48640,AT4G39170,AT1G14030,AT1G02640,AT5G66570,AT4G34790,AT2G35500,AT1G66180,AT2G42200,AT5G08020,AT1G28660,AT1G20020,AT1G27420,AT1G11000,AT1G01140,AT3G11000,AT3G08800,AT4G23630,AT1G62870,AT1G75440,AT3G49260,AT3G14190,AT2G24762,AT4G02630,AT3G43810,AT1G30100,AT5G39760,AT5G39570,AT3G04140,AT3G50270,AT4G11910,AT5G06510,AT3G13662,AT1G12430,AT5G51890,AT2G13580,AT1G62975,AT2G32610,AT1G71695,AT5G10770,AT4G30270,AT3G16340,AT5G43940,AT5G51760,AT4G14620,AT1G47860,AT3G21670,AT4G19420,AT4G34620,AT1G20620,AT3G42670,AT3G44800,AT1G04250,AT3G60670,AT1G03650,AT4G23000,AT4G16780,AT3G27560,AT4G14120,AT5G04490,AT3G05210,AT4G30490,AT1G53070,AT2G21860,AT1G04040,AT3G21690,AT4G18200,AT1G70710,AT1G30650,AT1G78970,AT3G28930,AT4G27300,AT3G62740,AT3G27690,AT1G67600,AT4G36920,AT2G35940,AT1G62300,AT4G03320,AT5G46590,AT1G71230,AT4G10910,AT1G75140,AT3G19130,AT2G28550,AT3G12590,AT3G57810,AT4G25990,AT1G61260,AT1G74430,AT4G28490,AT4G08950,AT4G10265,AT1G73190,AT4G13510,AT5G15930,AT3G08680,AT1G10360,AT5G06250,AT4G23050,AT3G23570,AT1G23080,AT4G01480,AT4G32950,AT3G16730,AT3G09600,AT5G06570,AT4G34810,AT1G15560,AT3G50280,AT2G22610,AT3G49110,AT5G51800,AT5G08350,AT5G41080,AT3G63450,AT1G78370,AT3G56400,AT1G09570,AT5G67020,AT1G24530,AT2G39570,AT4G16447,AT3G26500,AT1G12240,AT1G13400,AT3G09440,AT3G58760,AT3G22140,AT4G25970,AT4G37240,AT5G03990,AT2G45770,AT4G00340,AT5G64870,AT4G09030,AT1G73010,AT1G31290,AT5G13330,AT5G01200,AT2G26170,AT1G26770,AT4G33000,AT2G25170,AT5G65205,AT5G60800,AT1G77855,AT4G25000,AT1G17230,AT5G28380,AT1G37140,AT1G47760,AT3G25500,AT1G71696,AT5G23360,AT3G02040,AT1G57560 WELLMER_RATIOS-R4_DN Down-regulated genes Inferred from Ratios r4 (Table S2 PubmedID:16789830) AT1G60630,AT2G28070,AT2G05530,AT1G80730,AT5G52520,AT2G33640,AT2G26380,AT3G54110,AT1G10450,AT2G27880,AT4G37400,AT2G38870,AT5G53390,AT4G30410,AT4G33150,AT3G23130,AT5G10080,AT5G66300,AT5G26030,AT1G19690,AT2G16090,AT3G53950,AT3G54810,AT1G23600,AT5G02270,AT1G46264,AT4G02990,AT3G48460,AT1G78440,AT4G25170,AT3G48670,AT4G21105,AT5G22430,AT2G21640,AT4G01360,AT1G01430,AT5G40540,AT2G48020,AT5G19140,AT4G30110,AT1G09310,AT1G21400,AT5G51070,AT5G22700,AT2G39350,AT1G74200,AT5G49360,AT4G39780,AT1G80510,AT2G41990,AT4G31140,AT4G20040,AT2G25750,AT5G35930,AT5G04100,AT5G17710,AT4G23170,AT3G19990,AT5G23820,AT1G27540,AT4G33430,AT2G38430,AT4G15630,AT5G49330,AT2G39660,AT5G23260,AT1G25310,AT1G54530,AT4G29810,AT1G21120,AT4G18400,AT1G13020,AT1G32240,AT2G38740,AT1G65980,AT5G01040,AT4G31890,AT5G11160,AT1G69870,AT3G21175,AT4G33010,AT1G61300,AT1G80990,AT2G20670,AT3G06060,AT1G60680,AT1G78860,AT5G24460,AT3G61490,AT3G46970,AT5G59370,AT1G12650,AT5G37790,AT5G02890,AT1G53120,AT2G30370,AT3G14770,AT5G03455,AT1G21270,AT2G33480,AT5G48310,AT1G70895,AT4G00500,AT1G80760,AT5G09980,AT4G17990,AT1G20530,AT3G20380,AT1G62270,AT1G17970,AT2G14800,AT2G43620,AT1G11710,AT5G01220,AT4G02530,AT5G39220,AT5G45630,AT4G20720,AT3G04510,AT1G20980,AT3G13480,AT5G19430,AT1G60530,AT4G28430,AT1G16850,AT1G63650,AT3G11230,AT1G17455,AT2G26870,AT5G16230,AT5G65660,AT1G71970,AT1G70790,AT5G03170,AT2G23950,AT4G00970,AT5G20400,AT3G07330,AT5G15670,AT2G16720,AT2G44170,AT3G16750,AT2G44940,AT5G38300,AT2G38860,AT5G37300,AT1G52620,AT3G19750,AT5G31770,AT2G26660,AT3G19660,AT5G06650,AT5G42630,AT2G46900,AT5G61590,AT1G14180,AT3G56360,AT2G22980,AT5G09470,AT4G20270,AT4G21270,AT3G19010,AT3G49120,AT5G46730,AT4G02360,AT3G17430,AT2G16060,AT5G05190,AT5G01260,AT1G31490,AT1G80200,AT2G44070,AT1G26960,AT1G44800,AT1G14720,AT5G12050,AT4G32920,AT5G56320,AT3G13010,AT3G17380,AT2G31730,AT4G12330,AT1G11080,AT4G02130,AT5G26250,AT5G20700,AT1G02065,AT2G20400,AT2G28810,AT1G79620,AT2G39220,AT5G03520,AT4G34990,AT3G59210,AT4G34230,AT3G59320,AT2G21780,AT5G16570,AT2G20890,AT2G45340,AT3G20820,AT3G47960,AT3G51240,AT4G26320,AT2G45870,AT3G49760,AT1G72930,AT1G08930,AT2G43840,AT1G03170,AT1G30530,AT5G44790,AT5G08680,AT3G26210,AT1G18320,AT5G08565,AT1G77660,AT3G08860,AT5G05830,AT5G55900,AT2G22970,AT5G65730,AT1G04360,AT5G57685,AT3G21560,AT3G05660,AT3G14590,AT4G18280,AT3G44290,AT2G39510,AT1G07473,AT5G49990,AT5G50740,AT1G50460,AT1G15350,AT2G26010,AT4G23400,AT3G04520,AT1G26180,AT2G45190,AT1G25580,AT5G23000,AT1G61190,AT5G44580,AT3G46740,AT3G53140,AT1G70310,AT5G49700,AT4G18960,AT1G08650,AT4G12890,AT5G60170,AT5G62680,AT3G24520,AT1G68170,AT2G38310,AT1G14700,AT5G09390,AT3G57720,AT1G64625,AT5G13180,AT1G16800,AT2G01950,AT1G56660,AT1G49340,AT4G08770,AT1G47485,AT3G12890,AT1G07240,AT3G60890,AT1G72100,AT1G27660,AT2G30540,AT3G17290,AT2G24280,AT5G56550,AT4G00040,AT2G47940,AT3G54780,AT3G23810,AT5G20240,AT4G34420,AT1G56170,AT1G16490,AT1G67730,AT3G28650,AT2G46680,AT5G57670,AT5G09400,AT5G62600,AT3G30140,AT1G12730,AT2G40230,AT5G28650,AT4G13950,AT3G15750,AT1G07600,AT1G58270,AT5G02750,AT2G35585,AT1G09990,AT1G36390,AT1G70170,AT1G52980,AT1G52190,AT4G37610,AT4G39510,AT5G15430,AT3G44500,AT1G54060,AT5G62230,AT1G49830,AT1G09970,AT5G20250,AT2G28410,AT2G01310,AT3G49210,AT2G27420,AT3G43110,AT2G37970,AT4G05050,AT1G29320,AT3G06270,AT5G65040,AT4G27520,AT4G22950,AT2G24070,AT2G21210,AT4G01330,AT3G49680,AT5G53700,AT3G09630,AT5G19770,AT2G38940,AT5G55310,AT4G10060,AT2G18660,AT2G16700,AT4G15093,AT3G57170,AT3G44320,AT1G67865,AT3G03190,AT1G23140,AT5G22020,AT5G28400,AT1G73590,AT1G48120,AT3G17609,AT1G68530,AT1G26410,AT5G48900,AT1G29560,AT3G51860,AT1G12200,AT2G36380,AT5G42530,AT1G21130,AT1G01720,AT1G21460,AT5G08420,AT5G18670,AT2G22190,AT5G32460,AT5G10300,AT1G51270,AT2G34850,AT1G67770,AT3G61420,AT2G07680,AT3G19850,AT3G24225,AT3G60640,AT3G05160,AT5G02940,AT5G54980,AT1G45688,AT5G50810,AT1G71870,AT1G09415,AT5G58900,AT1G71880,AT5G35770,AT1G70985,AT3G53560,AT2G46690,AT4G01970,AT4G33320,AT2G23600,AT2G43490,AT4G21490,AT5G20360,AT1G52360,AT5G38540,AT5G06380,AT2G28320,AT3G29970,AT4G01600,AT3G16565,AT1G66200,AT1G24180,AT1G13600,AT1G80615,AT2G34340,AT5G01520,AT3G11580,AT5G25150,AT1G06350,AT5G62165,AT3G53760,AT5G27690,AT2G31390,AT3G15530,AT3G11680,AT3G25640,AT5G09570,AT4G32520,AT1G75240,AT2G36870,AT3G02470,AT1G35750,AT4G01170,AT5G17620,AT5G51210,AT4G25430,AT5G18290,AT4G36990,AT5G43870,AT2G46950,AT2G30000,AT5G62170,AT4G32540,AT5G43380,AT1G67920,AT1G27120,AT4G37180,AT2G08986,AT1G33080,AT3G47210,AT4G23340,AT3G19180,AT1G06030,AT4G32980,AT5G03150,AT1G67860,AT5G17630,AT4G34710,AT1G62690,AT1G73550,AT2G39280,AT1G15160,AT2G41290,AT3G01490,AT3G59845,AT5G24800,AT4G37280,AT1G73370,AT5G55250,AT1G56150,AT4G38400,AT1G55810,AT5G45860,AT5G45320,AT1G35660,AT1G24050,AT4G05380,AT1G48410,AT3G54530,AT2G31160,AT1G76110,AT3G26200,AT5G32475,AT5G02170,AT1G20160,AT2G24570,AT1G75430,AT5G03410,AT3G17600,AT2G44080,AT1G05760,AT2G42820,AT4G37550,AT1G69620,AT2G41070,AT3G19860,AT1G24735,AT5G22920,AT2G27190,AT1G67870,AT1G22180,AT5G20810,AT4G31380,AT3G13190,AT5G23210,AT1G06390,AT2G18500,AT3G58770,AT1G11210,AT1G25230,AT5G07580,AT3G12830,AT3G61150,AT2G42100,AT3G28990,AT5G17250,AT1G76660,AT1G11520,AT1G32800,AT2G47510,AT3G13310,AT4G19230,AT5G20830,AT1G76590,AT1G70320,AT4G34110,AT1G30260,AT1G15960,AT1G27760,AT3G54340,AT3G59380,AT5G11070,AT5G25400,AT5G63460,AT3G48740,AT1G04010,AT1G78570,AT5G16600,AT5G61120,AT1G48960,AT5G05810,AT1G80100,AT1G30320,AT1G58340,AT1G58360,AT1G19770,AT3G05700,AT3G28540,AT1G21250,AT1G03040,AT1G52140,AT1G22710,AT1G12880,AT3G60960,AT1G60270,AT3G06020,AT2G45420,AT3G49570,AT5G56950,AT3G01680,AT3G59200,AT1G32450,AT1G33590,AT3G43190,AT3G63140,AT4G08780,AT5G23490,AT4G25750,AT1G07500,AT5G39670,AT2G41790,AT1G48860,AT2G37260,AT2G28085,AT1G35290,AT1G58050,AT3G22560,AT4G18120,AT2G43670,AT2G44960,AT1G08410,AT5G18200,AT5G11460,AT2G03710,AT4G35900,AT2G33040,AT4G00150,AT5G19120,AT4G04690,AT1G30950,AT5G16450,AT1G09812,AT5G53550,AT3G50930,AT1G70510,AT1G79840,AT1G64060,AT3G17790,AT4G14365,AT4G34970,AT1G03820,AT1G12600,AT5G11190,AT3G45010,AT2G47020,AT3G05380,AT5G65410,AT1G26190,AT3G17100,AT2G46630,AT5G17950,AT1G09390,AT2G18510,AT2G38640,AT5G39630,AT5G18560,AT1G53560,AT4G02580,AT4G10340,AT1G25530,AT1G66140,AT5G59310,AT2G46410,AT2G45660,AT2G42150,AT2G27250,AT4G05120,AT1G61930,AT5G53730,AT2G04795,AT5G52320,AT5G61850,AT3G29810,AT1G20140,AT5G60250,AT2G30890,AT4G16860,AT2G17450,AT1G24575,AT2G40970,AT3G16400,AT5G45830,AT3G61250,AT1G07750,AT2G14210,AT4G11190,AT5G17050,AT3G21770,AT3G03270,AT5G01840,AT1G68130,AT4G21480,AT3G21420,AT2G03810,AT5G07440,AT3G59270,AT5G37030,AT4G34590,AT1G76420,AT3G13445,AT2G38340,AT3G09260,AT4G39480,AT1G69600,AT1G07260,AT4G02520,AT3G52590,AT2G23610,AT3G17760,AT2G38120,AT4G22540,AT4G27980,AT2G19950,AT1G30040,AT5G06070,AT4G25780,AT3G28560,AT4G37740,AT1G15310,AT5G51190,AT4G23830,AT5G22460,AT1G50290,AT3G15170,AT1G30280,AT2G18550,AT1G26310,AT4G07650,AT1G23380,AT1G42680,AT3G50630,AT5G65140,AT4G37520,AT2G45410,AT2G17770,AT4G21560,AT3G61630,AT1G30360,AT1G68320,AT3G16390,AT5G24860,AT1G15670,AT2G17950,AT3G22540,AT1G52030,AT5G28490,AT5G50915,AT5G44620,AT5G36010,AT3G02910,AT1G75520,AT4G15250,AT3G59690,AT5G14090,AT1G36940,AT5G28000,AT4G15765,AT4G31610,AT1G75540,AT1G66760,AT1G10540,AT1G33700,AT4G37570,AT1G28360,AT3G30350,AT1G05370,AT2G19800,AT5G37600,AT5G51860,AT1G56430,AT3G06590,AT1G12980,AT1G52400,AT5G35860,AT1G43000,AT1G31750,AT4G31910,AT4G15210,AT1G24590,AT5G65070,AT1G61810,AT2G36610,AT3G14370,AT1G49450,AT1G69850,AT2G41100,AT4G24540,AT1G61120,AT3G22550,AT3G52410,AT5G20430,AT1G30840,AT3G15650,AT1G23090,AT1G19540,AT4G02380,AT5G14920,AT5G52950,AT1G35910,AT5G08150,AT4G31620,AT4G12440,AT2G30750,AT3G27100,AT2G04063,AT1G77380,AT1G23800,AT5G51870,AT5G09220,AT2G14890,AT3G28570,AT5G55430,AT5G65170,AT5G03840,AT5G09970,AT3G29035,AT5G26220,AT4G37540,AT4G05136,AT1G60540,AT5G38940,AT1G49230,AT3G13130,AT2G30770,AT1G31710,AT1G80580,AT3G52580,AT5G66700,AT1G68640,AT1G58310,AT4G02280,AT1G26630,AT2G22540,AT3G18740,AT1G80050,AT5G10970,AT5G07190,AT4G21690,AT4G14130,AT1G27020,AT2G18020,AT4G25100,AT4G22490,AT1G32280 WELLMER_RATIOS-R5_UP Up-regulated genes Inferred from Ratios r5 (Table S2 PubmedID:16789830) AT5G55720,AT4G38770,AT1G58430,AT5G26000,AT2G20870,AT3G12760,AT2G42990,AT1G33811,AT5G09780,AT1G65450,AT3G56260,AT3G06120,AT2G24560,AT2G38995,AT4G37980,AT3G45140,AT2G38110,AT5G33370,AT2G04570,AT1G06360,AT5G02940,AT2G42830,AT2G36750,AT2G45890,AT3G49120,AT1G74670,AT5G47590,AT5G20630,AT1G07473,AT5G06440,AT2G10940,AT4G28780,AT2G31610,AT5G06560,AT5G41770,AT3G23410,AT2G30000,AT5G42630,AT1G15360,AT3G23480,AT2G46720,AT4G14650,AT1G62780,AT5G55450,AT3G24140,AT1G48470,AT4G24140,AT1G80990,AT4G18960,AT5G22430,AT3G23810,AT5G25980,AT5G23970,AT2G11260,AT1G34580,AT4G27710,AT4G02420,AT2G34810,AT5G28030,AT2G43620,AT3G27690,AT3G57600,AT2G36380,AT1G72660,AT1G51805,AT2G20875,AT1G06640,AT3G53310,AT3G61150,AT3G55290,AT4G23830,AT5G23260,AT2G42100,AT1G31490,AT1G02940,AT1G75900,AT5G59320,AT3G30140,AT1G71050,AT3G01500,AT5G06980,AT5G56550,AT1G26630,AT1G25450,AT5G50130,AT5G15310,AT4G37280,AT5G01400,AT2G05380,AT2G21860,AT4G02410,AT3G46740,AT1G71970,AT4G22870,AT2G23560,AT5G24560,AT1G24530,AT1G70320,AT1G19770,AT1G07430,AT5G03830,AT1G11520,AT4G23170,AT2G14660,AT1G06390,AT2G43490,AT3G17290,AT1G03940,AT5G54250,AT1G02340,AT4G00970,AT1G12860,AT1G04110,AT5G17220,AT5G56950,AT4G23680,AT1G05370,AT5G51520,AT1G02930,AT3G09600,AT5G55900,AT3G46670,AT4G22880,AT1G15260,AT1G28590,AT5G15530,AT1G29560,AT1G80360,AT1G76100,AT2G23010,AT4G08950,AT2G21880,AT1G27120,AT4G01700,AT1G52360,AT4G18720,AT1G01030,AT5G38300,AT5G46690,AT2G47940,AT2G35500,AT3G52840,AT2G36430,AT4G19430,AT3G09630,AT4G29700,AT5G56490,AT3G15360,AT1G32780,AT5G09400,AT2G33800,AT3G15820,AT1G54060,AT5G24150,AT4G05240,AT4G16050,AT3G57780,AT5G48310,AT1G48120,AT4G34110,AT4G18120,AT2G03110,AT1G11850,AT1G62540,AT2G01310,AT5G58660,AT1G12080,AT4G33150,AT5G08070,AT5G28380,AT4G24150,AT1G56720,AT1G25340,AT5G48980,AT3G48460,AT4G16860,AT3G59380,AT3G06880,AT3G09440,AT1G66940,AT5G23490,AT1G09340,AT4G01500,AT1G17455,AT5G52580,AT5G08260,AT4G16560,AT2G44070,AT1G35660,AT4G14090,AT1G10610,AT2G04160,AT4G18970,AT2G19950,AT1G12650,AT1G31550,AT1G29320,AT1G63650,AT2G47020,AT1G49450,AT1G27030,AT5G25150,AT2G03810,AT3G53760,AT1G35730,AT3G17930,AT1G61190,AT3G16380,AT5G44680,AT1G13080,AT1G10980,AT5G25470,AT4G01330,AT4G13510,AT1G16960,AT5G48490,AT1G04010,AT1G28600,AT3G48640,AT1G69180,AT4G10910,AT1G48660,AT1G72610,AT5G03410,AT2G39280,AT4G27520,AT2G26170,AT2G38170,AT4G12980,AT5G08640,AT3G63140,AT2G27880,AT1G08320,AT3G51860,AT1G16800,AT5G17620,AT2G22980,AT1G43205,AT4G26120,AT1G04040,AT4G20720,AT4G27890,AT3G20820,AT1G45191,AT3G50800,AT5G60970,AT1G68530,AT5G08420,AT5G10420,AT5G06510,AT3G11280,AT5G13730,AT2G30770,AT1G14580,AT1G65490,AT4G33320,AT1G04920,AT3G47960,AT1G24020,AT5G01260,AT2G01520,AT1G49975,AT1G36390,AT4G01410,AT3G29590,AT3G30775,AT2G41790,AT4G03050,AT2G38620,AT1G80510,AT1G02850,AT1G27760,AT5G43290,AT4G23180,AT1G52980,AT5G58520,AT5G20360,AT2G44940,AT1G74200,AT2G46010,AT3G47950,AT4G28430,AT1G22180,AT4G25750,AT5G49890,AT3G28690,AT2G41290,AT5G28020,AT4G27330,AT2G20890,AT5G10080,AT1G53230,AT2G28470,AT2G06025,AT4G37550,AT5G67280,AT1G52910,AT5G42800,AT2G01430,AT1G22370,AT2G44080,AT5G55310,AT1G27540,AT4G14440,AT4G19380,AT1G28230,AT2G30010,AT3G54810,AT5G61590,AT5G40960,AT5G57270,AT5G37600,AT2G39730,AT3G48620,AT4G18280,AT3G61420,AT3G14760,AT2G41100,AT4G13540,AT1G80615,AT2G45340,AT4G21270,AT2G25790,AT1G26210,AT1G05540,AT4G24510,AT3G13190,AT2G33205,AT5G52520,AT1G07270,AT3G49670,AT2G14800,AT3G50170,AT1G21400,AT4G37330,AT4G09350,AT1G45688,AT5G38530,AT1G56660,AT3G05210,AT5G17710,AT5G62280,AT5G25620,AT4G38200,AT4G13950,AT2G44960,AT2G43510,AT1G21130,AT3G01860,AT5G31770,AT5G55180,AT5G06530,AT5G47500,AT2G45770,AT4G21105,AT3G04550,AT4G39950,AT1G02065,AT1G12330,AT5G28490,AT1G30320,AT4G37310,AT4G22753,AT5G37460,AT1G80080,AT5G52950,AT1G61300,AT1G23020,AT4G16270,AT4G29810,AT1G14760,AT5G57123,AT2G28320,AT1G55330,AT4G05136,AT1G21310,AT4G38860,AT3G03450,AT1G69620,AT3G04290,AT3G10720,AT5G09990,AT3G28560,AT3G61950,AT3G60160,AT2G18020,AT3G26800,AT5G37790,AT3G14395,AT3G05380,AT2G08986,AT5G06870,AT1G09970,AT2G34510,AT2G30750,AT3G54350,AT1G60530,AT1G62975,AT5G01220,AT1G24180,AT1G06350,AT2G40230,AT1G01430,AT3G58220,AT1G26180,AT1G58270,AT1G15210,AT5G17250,AT2G22190,AT5G62350,AT4G18390,AT2G45180,AT4G27980,AT3G29370,AT1G65500,AT2G14890,AT1G28660,AT5G07990,AT1G16490,AT3G16565,AT5G60170,AT4G32520,AT3G09922,AT4G14130,AT1G69560,AT1G66390,AT5G41050,AT5G57887,AT1G52620,AT1G56075,AT5G18840,AT2G01950,AT3G60930,AT3G62700,AT3G50270,AT3G57170,AT2G23430,AT5G64870,AT1G60680,AT4G23600,AT2G22610,AT5G19770,AT5G10890,AT3G17070,AT4G02990,AT4G14620,AT3G07010,AT5G65730,AT4G05050,AT4G02530,AT5G13180,AT3G56220,AT4G21970,AT4G32000,AT4G02280,AT5G01610,AT1G58460,AT3G29030,AT5G03790,AT3G43190,AT4G23810,AT2G40250,AT1G80810,AT3G61490,AT4G21200,AT1G70940,AT5G51630,AT4G14365,AT4G35750,AT1G14700,AT1G60630,AT5G23820,AT1G11080,AT1G09390,AT3G14840,AT5G13400,AT4G21490,AT5G07240,AT3G15750,AT1G02640,AT5G16030,AT2G19650,AT1G21120,AT3G49260,AT4G34760,AT5G62360,AT3G26840,AT1G20650,AT3G47210,AT5G16230,AT3G62740,AT1G42680,AT3G44770,AT1G01140,AT1G19640,AT1G12730,AT5G39530,AT2G45660,AT1G53070,AT3G17200,AT5G17950,AT3G15530,AT1G41830,AT2G42200,AT4G04130,AT2G22680,AT4G25620,AT2G43520,AT5G58260,AT2G33040,AT5G57720,AT1G76090,AT1G30170,AT1G53080,AT1G20020,AT1G31210,AT5G45340,AT4G15440,AT4G20130,AT1G28360,AT5G15930,AT2G40475,AT4G33560,AT3G09260,AT3G06770,AT4G26540,AT5G13060,AT1G16750,AT2G01420,AT1G08410,AT4G03330,AT3G44290,AT4G25430,AT5G06670,AT4G37080,AT2G23180,AT3G17010,AT1G75430,AT5G39860,AT5G12050,AT2G42410,AT3G21690,AT1G32240,AT1G69523,AT3G11260,AT1G09750,AT1G75540,AT1G80640,AT1G72930,AT3G15030,AT1G25310,AT2G16660,AT5G11950,AT1G70000,AT5G20240,AT5G36010,AT5G10300,AT5G62170,AT3G59530,AT2G39660,AT5G44700,AT2G01890,AT1G16850,AT4G25990,AT1G12430,AT5G09570,AT1G14920,AT4G33790,AT1G76590,AT4G08850,AT1G24050,AT1G61810,AT3G18000,AT3G56400,AT4G22570,AT1G78370,AT2G28550,AT2G38870,AT5G60880,AT1G15560,AT3G50280,AT3G15270,AT1G72100,AT2G45870,AT3G06590,AT3G21510,AT1G30100,AT4G27300,AT2G46430,AT2G36660,AT5G66570,AT5G03990,AT1G53560,AT1G37140,AT1G60060,AT1G63420,AT4G30650,AT1G21950,AT1G46264,AT4G00150,AT2G05940,AT1G34245,AT3G48670,AT5G03350,AT1G08960,AT3G25130,AT1G21270,AT5G08250,AT3G02150,AT1G52030,AT5G37300,AT4G03400,AT1G03040,AT3G46970,AT1G12320,AT3G54140,AT4G00460,AT3G14770,AT4G12910,AT5G09980,AT3G05980,AT1G58360,AT2G45080,AT1G69850,AT1G69530,AT3G48740,AT5G18560,AT3G16150,AT3G44500,AT3G17790,AT5G28400,AT4G30350,AT2G31150,AT2G46680,AT1G73050,AT2G37260,AT1G47860,AT5G28650,AT3G17760,AT4G24130,AT5G63430,AT3G61630,AT1G68710,AT3G55130,AT1G01720,AT1G55380,AT4G08770,AT2G02320,AT1G62870,AT2G41510,AT5G15430,AT1G15160,AT5G20110,AT2G44740,AT2G44450,AT1G76620,AT1G19830,AT3G28990,AT1G68570,AT4G31140,AT2G46650,AT5G18670,AT5G20700,AT1G09990,AT2G31070,AT5G47250,AT1G67730,AT1G56630,AT2G38860,AT1G09415,AT2G47510,AT5G01015,AT5G44620,AT3G05180,AT4G16370,AT4G30490,AT5G24570,AT2G31160,AT5G45830,AT5G14010,AT3G52410,AT1G56150,AT3G59200,AT5G04100,AT4G02380,AT2G22960,AT2G02080,AT2G01670,AT1G77110,AT3G59080,AT5G53550,AT3G16340,AT5G15210,AT5G01600,AT4G37610,AT5G62100,AT2G36610,AT3G52580,AT2G39220,AT4G16590,AT1G53120,AT1G24260,AT2G28605,AT5G13330,AT2G35310,AT1G70170,AT1G08310,AT1G10450,AT3G14370,AT1G21250,AT1G80760,AT5G49360,AT1G30360,AT5G65660,AT4G07650,AT2G24210,AT2G24280,AT4G31380,AT3G32240,AT4G39510,AT2G22970,AT4G36150,AT5G48080,AT1G76660,AT1G51270,AT2G17770,AT5G60800,AT1G66180,AT3G23560,AT5G35670,AT5G66580,AT1G78970,AT3G58760,AT3G06840,AT3G52480,AT5G15802,AT1G10060,AT2G39350,AT4G20270,AT4G17990,AT4G23670,AT1G49830,AT3G15720,AT2G36000,AT4G28490,AT2G47930,AT1G05480,AT4G23340,AT1G80460,AT1G32800,AT3G51240,AT4G39940,AT1G44100,AT1G32280,AT3G25760,AT3G29035,AT5G01570,AT2G23200,AT1G08930,AT3G12610,AT5G35860,AT2G46900,AT5G51190,AT3G18740,AT3G51895,AT4G25970,AT2G17950,AT5G56320,AT5G25460,AT2G42960,AT5G19120,AT1G25230,AT4G11190,AT2G24570,AT5G37030,AT3G26190,AT2G34490,AT3G02040,AT1G26770,AT5G02750,AT5G21150,AT5G26250,AT1G33170,AT4G30450,AT3G62750,AT3G53560,AT3G06020,AT5G15670,AT2G18510,AT2G14210,AT1G17380,AT5G64530,AT4G15920,AT1G70985,AT3G53140,AT5G32460,AT2G18120,AT1G03720,AT2G26740,AT3G28540,AT2G27420,AT1G11000,AT3G57810,AT1G14030,AT3G44510,AT2G28140,AT5G42200,AT2G40130,AT1G23080,AT3G10960,AT3G05660,AT3G26200,AT5G49330,AT4G37740,AT1G08180,AT5G62230,AT5G18200,AT2G25170,AT1G13230,AT1G12600,AT5G49990,AT5G62680,AT4G02580,AT1G17190,AT1G77855,AT4G01360,AT5G04020,AT3G14590,AT3G21890,AT5G57090,AT1G68740,AT3G49210,AT2G04063,AT4G05120,AT1G22910,AT1G76880,AT5G23360,AT3G11680,AT5G03760,AT3G21560,AT4G16550,AT2G23950,AT1G30530,AT5G64570,AT5G65590,AT2G30370,AT4G32480,AT3G17580,AT1G75240,AT3G26510,AT3G44960,AT1G26600,AT5G14920,AT2G35290,AT1G62300,AT1G64625,AT1G70710,AT5G44790,AT3G10190,AT3G19860,AT1G12240,AT2G01990,AT4G23400,AT3G25240,AT1G20620,AT3G59320,AT5G49760,AT5G45630,AT5G46590,AT5G61120,AT5G23370,AT3G19750,AT4G32990,AT3G46770,AT2G26660,AT4G10060,AT4G01970,AT1G65730,AT4G12330,AT2G14900,AT4G39170,AT5G66350,AT3G15210,AT4G39480,AT1G55110,AT5G09470,AT5G10180,AT5G39785,AT2G23610,AT1G79840,AT1G04360,AT5G53430,AT4G22540,AT5G59370,AT5G24670,AT2G35940,AT1G26190,AT4G00050,AT5G51210,AT3G02470,AT1G31710,AT1G60540,AT4G34590,AT4G36640,AT4G36925,AT4G19230,AT3G22550,AT5G18860,AT4G00180,AT4G20260,AT2G25810,AT4G38840,AT4G16780,AT3G21670,AT2G46630,AT3G03190,AT3G05630,AT2G48020,AT5G39670,AT3G25500,AT1G02610,AT5G26230,AT3G50740,AT4G16160,AT3G20180,AT4G37390 WELLMER_RATIOS-R5_DN Down-regulated genes Inferred from Ratios r5 (Table S2 PubmedID:16789830) AT1G13020,AT4G11910,AT1G19540,AT4G14120,AT2G41070,AT4G15250,AT2G34340,AT1G07750,AT2G21550,AT3G19850,AT5G28000,AT1G10540,AT4G18200,AT2G25750,AT3G28650,AT1G33700,AT1G56170,AT1G26410,AT1G33590,AT4G37570,AT1G64970,AT4G29270,AT4G32540,AT4G23630,AT5G65170,AT1G27660,AT1G71870,AT3G19990,AT1G09812,AT4G24700,AT1G32450,AT5G43870,AT5G25400,AT4G36920,AT5G17630,AT4G37400,AT1G65295,AT5G08680,AT5G22700,AT3G51660,AT5G08350,AT2G28410,AT5G08000,AT5G05190,AT3G24520,AT2G01150,AT4G26280,AT2G43840,AT1G50460,AT1G67770,AT1G78570,AT3G54960,AT1G20980,AT2G03130,AT1G16705,AT4G23050,AT2G22170,AT4G31890,AT1G55810,AT4G28160,AT1G69600,AT5G08020,AT3G60670,AT3G13662,AT1G69870,AT5G20400,AT5G65140,AT2G45190,AT3G49110,AT1G04650,AT4G39780,AT1G13680,AT2G34850,AT1G66140,AT4G34710,AT4G17770,AT3G13445,AT5G19430,AT5G06250,AT1G73550,AT5G02170,AT1G26945,AT3G49680,AT3G23290,AT3G47295,AT5G53200,AT5G59310,AT2G07705,AT1G07260,AT3G43960,AT2G32610,AT3G26500,AT3G16390,AT1G71880,AT5G06300,AT2G04795,AT5G14090,AT1G20530,AT1G71695,AT2G28085,AT3G11000,AT1G23600,AT4G15620,AT5G40540,AT3G44800,AT3G63450,AT3G05030,AT5G15500,AT2G38740,AT4G25170,AT2G20400,AT1G09460,AT5G08565,AT2G41990,AT5G20250,AT1G23140,AT2G45420,AT1G56430,AT3G08680,AT3G11230,AT5G50010,AT1G70510,AT3G59845,AT5G34940,AT3G44320,AT3G42670,AT5G39220,AT1G70560,AT1G09570,AT2G18500,AT3G45780,AT1G77660,AT4G34810,AT1G12200,AT5G11190,AT1G77870,AT4G34230,AT5G66940,AT1G30040,AT1G64200,AT5G07440,AT4G14040,AT1G06420,AT5G39570,AT2G21640,AT2G18660,AT4G34800,AT5G11160,AT5G58690,AT3G60960,AT4G36540,AT2G24070,AT2G33530,AT1G13400,AT5G58900,AT1G78860,AT3G24450,AT5G03455,AT1G17230,AT4G00340,AT4G01600,AT1G27420,AT1G61930,AT1G49340,AT3G17640,AT2G05530,AT1G66400,AT2G13580,AT2G03710,AT1G09310,AT5G57685,AT1G75440,AT2G23760,AT2G39570,AT1G48410,AT2G38940,AT2G39510,AT5G63130,AT5G55250,AT1G60590,AT5G09220,AT2G26400,AT3G13480,AT5G62165,AT1G24735,AT5G06380,AT5G07580,AT2G24762,AT2G21210,AT4G21560,AT3G06060,AT1G10360,AT5G09970,AT1G72430,AT5G19140,AT2G45410,AT3G17100,AT4G02130,AT1G06520,AT5G24460,AT3G29810,AT4G15210,AT3G19660,AT3G21550,AT4G36990,AT1G68480,AT3G43110,AT1G64060,AT3G13310,AT3G11580,AT1G20850,AT5G32475,AT3G53530,AT3G17380,AT1G61260,AT2G26380,AT1G61120,AT5G13750,AT3G05700,AT4G33000,AT1G17970,AT5G49700,AT4G37520,AT4G31610,AT5G49170,AT4G27280,AT4G12850,AT1G29670,AT3G54210,AT3G61970,AT5G27690,AT5G52320,AT5G03520,AT3G61250,AT1G55690,AT5G47740,AT4G00810,AT1G04240,AT5G57670,AT1G57560,AT1G62690,AT1G60270,AT2G28810,AT3G23570,AT5G01075,AT1G06030,AT1G48860,AT5G02270,AT3G54530,AT3G56360,AT2G26010,AT5G22920,AT1G52140,AT2G30490,AT1G08650,AT5G51070,AT2G19310,AT2G40670,AT1G68640,AT2G43670,AT4G37180,AT1G12845,AT5G26030,AT5G03170,AT1G48960,AT2G37970,AT5G53700,AT4G02630,AT1G66200,AT3G01490,AT2G17450,AT1G58050,AT1G03170,AT3G29300,AT5G01200,AT5G10770,AT5G01870,AT5G67020,AT4G33010,AT1G69520,AT5G02890,AT1G23800,AT1G67920,AT2G38430,AT1G29460,AT5G03840,AT1G30280,AT4G21480,AT2G16700,AT5G66300,AT4G19420,AT5G15080,AT2G18550,AT3G17430,AT5G18290,AT2G42570,AT5G19340,AT2G23600,AT1G12280,AT4G21690,AT5G55620,AT4G25000,AT3G17600,AT2G36870,AT5G20430,AT5G39760,AT4G01060,AT5G25010,AT1G80050,AT1G70720,AT1G35750,AT5G20410,AT2G30890,AT1G27300,AT5G01040,AT5G24330,AT1G62270,AT3G29970,AT5G45860,AT1G05760,AT3G14190,AT5G04490,AT4G37685,AT2G42820,AT3G22160,AT5G38940,AT2G31980,AT4G02360,AT5G47240,AT4G09030,AT5G22940,AT4G36740,AT3G59210,AT5G59350,AT4G00490,AT2G37210,AT3G10405,AT1G14180,AT5G50810,AT5G67300,AT2G46330,AT5G02620,AT5G50915,AT3G04140,AT1G25580,AT5G24800,AT1G04900,AT4G22950,AT2G45920,AT4G26320,AT1G70790,AT5G51890,AT1G73190,AT1G13600,AT3G13010,AT2G30540,AT5G40942,AT5G01840,AT3G57720,AT1G67600,AT1G73370,AT3G59690,AT1G04250,AT5G17050,AT3G13130,AT1G73010,AT1G75140,AT4G31805,AT4G17460,AT3G24780,AT1G31750,AT1G71696,AT5G16450,AT4G34790,AT5G66800,AT1G35910,AT3G04520,AT5G01520,AT5G11070,AT5G20810,AT1G15350,AT1G27020,AT3G10525,AT1G15670,AT1G76790,AT2G16090,AT1G29500,AT1G47610,AT1G07240,AT1G65980,AT3G22370,AT4G16265,AT3G17609,AT5G65410,AT3G19180,AT5G51760,AT1G66760,AT4G08780,AT4G16447,AT3G08800,AT5G03150,AT3G26960,AT3G60640,AT3G02910,AT3G59270,AT4G30180,AT3G22140,AT4G34990,AT1G74040,AT2G46410,AT4G31620,AT4G02520,AT2G28610,AT2G38640,AT1G12880,AT5G54980,AT2G02130,AT1G14720,AT1G68130,AT4G02670,AT1G76110,AT3G07330,AT5G06650,AT3G22560,AT1G15310,AT2G32210,AT4G15093,AT5G61440,AT3G16430,AT4G23000,AT2G42280,AT1G58340,AT2G02795,AT5G15160,AT4G30270,AT1G20140,AT3G12890,AT3G12590,AT4G34970,AT3G20380,AT3G19130,AT5G65205,AT4G10340,AT1G03650,AT5G16600,AT5G65070,AT3G53280,AT3G58770,AT5G66700,AT4G10260,AT1G20160,AT1G78440,AT1G19690,AT1G75520,AT2G27190,AT2G42150,AT1G73590,AT3G04510,AT4G15630,AT1G67865,AT5G43380,AT5G23210,AT3G50930,AT5G05580,AT5G41080,AT4G00500,AT3G22540,AT1G70310,AT1G64680,AT3G15300,AT4G34620,AT2G39290,AT2G38120,AT5G61850,AT1G55805,AT3G30180,AT5G55430,AT2G46950,AT5G35930,AT4G30410,AT1G18320,AT2G40970,AT5G60250,AT4G12440,AT2G42885,AT5G05810,AT3G29690,AT2G33640,AT4G35900,AT3G54110,AT3G05160,AT3G23295,AT3G26744,AT5G62600,AT2G37640,AT1G33080,AT2G16060,AT1G23380,AT1G36940,AT5G48900,AT4G15765,AT3G25640,AT2G37470,AT5G06570,AT1G73670,AT1G50290,AT5G42870,AT4G37800,AT1G45150,AT3G05000,AT1G26310,AT1G30650,AT1G49230,AT5G59305,AT4G15160,AT5G63460,AT1G28210,AT1G31290,AT5G16570,AT1G21460,AT3G47470,AT4G33710,AT4G04690,AT1G69040,AT2G26870,AT5G43160,AT2G47760,AT5G04880,AT1G42990,AT2G03620,AT4G21590,AT2G39010,AT2G28070,AT1G18040,AT5G24860,AT3G21175,AT5G53730,AT1G44800,AT4G20040,AT3G06270,AT5G14360,AT1G07600,AT1G25530,AT3G56300,AT3G16400,AT3G26210,AT3G14060,AT5G51800,AT5G38540,AT5G26220,AT1G03820,AT4G34420,AT4G31910,AT3G28345,AT1G52190,AT1G74430,AT1G25250,AT1G02190,AT3G16730,AT5G56730,AT1G53110,AT5G05830,AT3G21430,AT5G22020,AT3G15170,AT1G67900,AT4G38400,AT3G09350,AT3G54780,AT5G51860,AT1G47485,AT5G20830,AT5G09390,AT1G11710,AT5G62920,AT1G47760,AT2G21780,AT2G38310,AT4G36850,AT2G31730,AT3G12830,AT2G46690,AT4G32980,AT2G16720,AT5G23000,AT3G23605,AT4G33430,AT3G55660,AT2G44170,AT3G12040,AT2G31390,AT4G24540,AT1G11210,AT4G03175,AT4G30110,AT2G20670,AT5G22580,AT4G29390,AT4G18400,AT3G52590,AT1G77380,AT1G43000,AT1G03180,AT3G15650,AT3G58210,AT4G01480,AT4G21850,AT2G03505,AT4G32920,AT4G09140,AT2G11000,AT1G67870,AT3G53950,AT4G25780,AT3G62050,AT4G37540,AT3G50630,AT2G35585,AT4G00040,AT5G10970,AT3G57200,AT1G07500,AT3G28930,AT5G64350,AT2G26520,AT3G22530,AT3G24225,AT2G37880,AT4G32690,AT2G41950,AT3G45010,AT4G18425,AT3G19010,AT3G21420,AT1G30840,AT1G68320,AT4G03320,AT3G43810,AT3G32917,AT1G30260,AT1G80730,AT3G27100,AT1G54530,AT2G33480,AT4G32950,AT5G43940,AT5G42530,AT5G39630,AT3G01680,AT3G08860,AT3G60890,AT5G45320,AT1G80200,AT5G50740,AT5G51870,AT2G07680,AT1G76420,AT1G70895,AT3G23130,AT3G30350,AT1G50060,AT2G19800,AT1G23090,AT5G08150,AT1G15960,AT4G09550,AT5G44580,AT2G28790,AT4G05380,AT3G49570,AT3G27560,AT5G46730,AT2G38340,AT5G35770,AT5G11460,AT5G22460,AT3G54340,AT1G30950,AT3G43800,AT2G22540,AT5G06070,AT4G12890,AT1G71230,AT5G07190,AT2G40205,AT1G24575,AT3G16750,AT1G17830,AT1G26960,AT4G22230,AT1G79620,AT1G32100,AT1G14450,AT1G67860,AT4G37240,AT1G68170,AT3G48660,AT4G01170,AT3G21770,AT1G58310,AT3G28570,AT2G14500,AT1G10960,AT1G52400,AT1G12980,AT4G10265,AT1G80100,AT5G65040,AT3G11090,AT2G27250,AT3G49760,AT3G03270,AT2G26150,AT1G22710,AT1G35290,AT4G22490,AT5G42980,AT2G32060,AT1G24590,AT1G80580,AT4G25100,AT1G67430,AT1G35280,AT5G20460,AT5G12950 HABU_MOM1_DDM1_DIFF Co-regulated genes in mom1 and ddm1 (Table S1 PubmedID:17082818) AT1G34180,AT1G03370,AT1G45145,AT3G57260,AT4G23150,AT1G73805,AT2G26100,AT5G18470,AT3G26830,AT4G01030,AT3G47380,AT2G33380,AT1G76090,AT4G21850,AT2G20290,AT5G25930,AT2G32680,AT2G31865,AT5G64000,AT2G24850,AT3G50770,AT4G39030,AT4G04490,AT2G18690,AT2G15790,AT4G10500,AT4G03210,AT4G02330,AT2G29460,AT1G30720,AT4G23220,AT3G13790,AT1G71030,AT4G02100 LEE_HY5_UP Genes Positively Regulated by HY5 (Table 1 PubmedID:17337630) AT5G65260,AT5G60360,AT5G13930,AT5G10100,AT5G08640,AT5G44110,AT1G19210,AT1G66160,AT1G24140,AT1G09480,AT4G32800,AT1G59640,AT4G37770,AT1G80850,AT5G01730,AT5G41170,AT4G34410,AT1G33560,AT5G49520,AT1G76650,AT4G31870,AT3G51240,AT3G02840,AT5G03210,AT3G55240,AT5G05270,AT4G29780,AT1G17420,AT1G73540,AT4G27280,AT1G25400,AT5G02270,AT5G62520,AT2G37430,AT2G30040,AT5G43890,AT1G19380,AT2G36220,AT2G22500,AT3G01830,AT1G73500,AT2G44080,AT2G41640,AT3G13600,AT1G18300,AT5G47590,AT3G62260,AT2G25460,AT1G18740,AT3G50800,AT1G77640,AT5G25810,AT2G22880,AT1G68840,AT1G56660,AT5G57510,AT1G76600,AT3G50850,AT1G68620,AT3G46080,AT2G28630,AT2G33580,AT2G35290,AT2G34330,AT1G61340,AT2G35930,AT5G52020,AT5G54510,AT5G65300,AT3G55980,AT5G67400,AT5G59550,AT5G23010,AT4G13010,AT5G15510,AT2G47460,AT3G54810,AT1G61890,AT4G34150,AT5G66210,AT5G02280,AT2G32510,AT5G01100,AT4G33920,AT2G03300,AT5G05410,AT1G60190,AT2G39650,AT3G48520,AT5G62180,AT5G59820,AT5G45110,AT4G25490,AT4G27250,AT5G01550,AT5G50950,AT3G06160,AT4G08950,AT4G05100,AT3G22830,AT2G29670,AT2G34990,AT3G05820,AT2G41100,AT5G64660,AT3G52740,AT4G17500,AT5G66650,AT2G02870,AT1G57770,AT3G56880,AT2G27080,AT5G53310,AT1G78440,AT3G14440,AT1G02810,AT1G07135,AT1G09070,AT1G12950,AT1G21910,AT1G35720,AT4G36670,AT3G09010,AT3G61680,AT3G62720,AT3G52400,AT3G25250,AT4G27310,AT2G37530,AT1G78990,AT3G23610,AT5G64550,AT5G13700,AT5G51190,AT5G45820,AT1G53170,AT4G36040,AT5G62020,AT3G19350,AT5G45630,AT5G49280,AT3G60550,AT1G71697,AT3G17130,AT2G42870,AT5G45340,AT4G21420,AT1G17380,AT1G18570,AT1G19180,AT1G20510,AT1G22750 LEE_HY5_DN Genes Negatively Regulated by HY5 (Table 1 PubmedID:17337630) AT1G32450,AT5G45850,AT1G10760,AT5G07680,AT4G01610,AT5G17760,AT4G15230,AT3G01350,AT2G27660,AT2G43590,AT5G01300,AT2G15020,AT4G37070,AT3G06080,AT4G36030,AT2G25890,AT1G15380,AT1G55550,AT1G78850,AT1G16850,AT1G78390,AT2G43050,AT4G34610,AT5G55220,AT3G16910,AT5G59930,AT3G07650,AT5G55620,AT2G46660,AT2G38750,AT5G59780,AT1G62780,AT4G32190,AT1G17460,AT2G41670,AT2G05160,AT2G40170,AT1G27480,AT5G53370,AT1G03630,AT1G13600,AT5G24140,AT3G04140,AT1G80130,AT2G41850,AT1G69760,AT5G62490,AT2G29630,AT2G28780,AT1G63190,AT2G31980,AT2G33380,AT4G37230,AT3G15670,AT3G21720,AT5G44120,AT2G35300,AT3G03450,AT1G72100,AT4G35030,AT3G02990,AT2G43570,AT3G21890,AT3G42930,AT1G24530,AT1G17100 DAY_OST_DIFF OST generated from the list of differentiall expressed genes using p -value < 0.05. (Table S5 PubmedID:18923020) AT1G01070,AT1G01120,AT1G01180,AT1G01240,AT1G01250,AT1G01410,AT1G01430,AT1G01470,AT1G01490,AT1G01550,AT1G01560,AT1G01610,AT1G01725,AT1G01830,AT1G02130,AT1G02190,AT1G02205,AT1G02305,AT1G02340,AT1G02450,AT1G02500,AT1G02640,AT1G02660,AT1G02850,AT1G02900,AT1G03020,AT1G03080,AT1G03170,AT1G03310,AT1G03490,AT1G03520,AT1G03550,AT1G03590,AT1G03610,AT1G03730,AT1G03850,AT1G03870,AT1G03920,AT1G04220,AT1G04240,AT1G04250,AT1G04330,AT1G04570,AT1G04580,AT1G04680,AT1G04770,AT1G05100,AT1G05170,AT1G05260,AT1G05280,AT1G05320,AT1G05480,AT1G05560,AT1G05590,AT1G05760,AT1G05810,AT1G05850,AT1G05870,AT1G06390,AT1G06420,AT1G06520,AT1G06830,AT1G06840,AT1G06850,AT1G07000,AT1G07090,AT1G07200,AT1G07220,AT1G07230,AT1G07300,AT1G07570,AT1G07590,AT1G07610,AT1G08200,AT1G08250,AT1G08380,AT1G08400,AT1G08510,AT1G08800,AT1G08810,AT1G08920,AT1G08940,AT1G09070,AT1G09180,AT1G09250,AT1G09310,AT1G09340,AT1G09440,AT1G09570,AT1G09575,AT1G09610,AT1G09850,AT1G10020,AT1G10070,AT1G10340,AT1G10370,AT1G10380,AT1G10460,AT1G10470,AT1G10500,AT1G10550,AT1G10640,AT1G10690,AT1G11130,AT1G11280,AT1G11310,AT1G11410,AT1G11440,AT1G11590,AT1G11700,AT1G11850,AT1G11970,AT1G12090,AT1G12200,AT1G12240,AT1G12320,AT1G12330,AT1G12460,AT1G12610,AT1G12710,AT1G12750,AT1G12820,AT1G12845,AT1G13080,AT1G13130,AT1G13210,AT1G13360,AT1G13380,AT1G13900,AT1G13930,AT1G13960,AT1G13970,AT1G13990,AT1G14030,AT1G14130,AT1G14150,AT1G14280,AT1G14370,AT1G14400,AT1G14430,AT1G14590,AT1G14720,AT1G14840,AT1G14870,AT1G14890,AT1G14920,AT1G15010,AT1G15100,AT1G15260,AT1G15400,AT1G15670,AT1G15740,AT1G15760,AT1G15950,AT1G15960,AT1G15970,AT1G15980,AT1G16180,AT1G16270,AT1G16370,AT1G16390,AT1G16400,AT1G16410,AT1G16510,AT1G16530,AT1G16670,AT1G16705,AT1G16730,AT1G16750,AT1G16880,AT1G16930,AT1G17120,AT1G17200,AT1G17550,AT1G17620,AT1G17745,AT1G17750,AT1G17800,AT1G17940,AT1G17950,AT1G17990,AT1G18210,AT1G18650,AT1G18670,AT1G18710,AT1G18840,AT1G18880,AT1G18980,AT1G19050,AT1G19170,AT1G19220,AT1G19230,AT1G19300,AT1G19540,AT1G19570,AT1G19660,AT1G19670,AT1G19780,AT1G19830,AT1G19835,AT1G19850,AT1G19940,AT1G19960,AT1G20010,AT1G20070,AT1G20160,AT1G20390,AT1G20440,AT1G20450,AT1G20470,AT1G20510,AT1G20620,AT1G20650,AT1G20680,AT1G20730,AT1G20850,AT1G20880,AT1G21000,AT1G21050,AT1G21090,AT1G21270,AT1G21310,AT1G21400,AT1G21460,AT1G21550,AT1G21590,AT1G21830,AT1G21910,AT1G21980,AT1G22030,AT1G22050,AT1G22160,AT1G22190,AT1G22250,AT1G22330,AT1G22400,AT1G22430,AT1G22440,AT1G22460,AT1G22480,AT1G22490,AT1G22610,AT1G22690,AT1G22710,AT1G22910,AT1G23040,AT1G23080,AT1G23130,AT1G23140,AT1G23200,AT1G23205,AT1G23210,AT1G23220,AT1G23240,AT1G23350,AT1G23390,AT1G23530,AT1G23610,AT1G23980,AT1G24070,AT1G24140,AT1G24145,AT1G24220,AT1G24260,AT1G24470,AT1G24735,AT1G25250,AT1G25450,AT1G25510,AT1G25530,AT1G26440,AT1G26450,AT1G26560,AT1G26650,AT1G26770,AT1G26810,AT1G26820,AT1G26960,AT1G26970,AT1G27030,AT1G27200,AT1G27290,AT1G27360,AT1G27370,AT1G27660,AT1G27730,AT1G27910,AT1G27920,AT1G27930,AT1G28020,AT1G28070,AT1G28080,AT1G28240,AT1G28260,AT1G28310,AT1G28390,AT1G28400,AT1G28460,AT1G28470,AT1G28480,AT1G28580,AT1G28610,AT1G28660,AT1G28680,AT1G29050,AT1G29200,AT1G29430,AT1G29450,AT1G29460,AT1G29500,AT1G29510,AT1G29520,AT1G29670,AT1G29750,AT1G30260,AT1G30330,AT1G30500,AT1G30760,AT1G30900,AT1G31280,AT1G31290,AT1G31300,AT1G31440,AT1G31490,AT1G31540,AT1G31580,AT1G31650,AT1G31720,AT1G31750,AT1G31770,AT1G31820,AT1G31830,AT1G31850,AT1G32080,AT1G32100,AT1G32240,AT1G32470,AT1G32510,AT1G32560,AT1G32700,AT1G32770,AT1G32920,AT1G32930,AT1G33080,AT1G33250,AT1G33475,AT1G33560,AT1G33700,AT1G33760,AT1G33800,AT1G33811,AT1G34060,AT1G34310,AT1G34560,AT1G35170,AT1G35230,AT1G35290,AT1G35310,AT1G35560,AT1G35600,AT1G35612,AT1G35625,AT1G35710,AT1G35910,AT1G36370,AT1G41830,AT1G42550,AT1G42660,AT1G43020,AT1G43580,AT1G43780,AT1G43910,AT1G44010,AT1G44100,AT1G44350,AT1G44608,AT1G44790,AT1G44800,AT1G45010,AT1G45688,AT1G45976,AT1G46264,AT1G46480,AT1G46768,AT1G47128,AT1G47540,AT1G47710,AT1G48090,AT1G48320,AT1G48480,AT1G48750,AT1G49430,AT1G49470,AT1G49500,AT1G49640,AT1G49740,AT1G49750,AT1G49800,AT1G49990,AT1G50290,AT1G50480,AT1G50640,AT1G50730,AT1G50740,AT1G51010,AT1G51030,AT1G51170,AT1G51340,AT1G51440,AT1G51500,AT1G51680,AT1G51700,AT1G51940,AT1G52030,AT1G52040,AT1G52140,AT1G52290,AT1G52400,AT1G52440,AT1G52470,AT1G52660,AT1G52750,AT1G52780,AT1G52880,AT1G52910,AT1G53100,AT1G53160,AT1G53310,AT1G53500,AT1G53590,AT1G53640,AT1G53660,AT1G53700,AT1G53730,AT1G53770,AT1G53840,AT1G53950,AT1G54020,AT1G54030,AT1G54040,AT1G54120,AT1G54130,AT1G54290,AT1G54430,AT1G54510,AT1G55020,AT1G55110,AT1G55260,AT1G55270,AT1G55330,AT1G55680,AT1G55740,AT1G55840,AT1G55850,AT1G56230,AT1G56560,AT1G56570,AT1G56580,AT1G56600,AT1G56670,AT1G56700,AT1G56720,AT1G57560,AT1G57620,AT1G58030,AT1G58080,AT1G58170,AT1G58280,AT1G58300,AT1G58340,AT1G58520,AT1G59124,AT1G59730,AT1G59740,AT1G59870,AT1G59900,AT1G59970,AT1G60060,AT1G60140,AT1G60190,AT1G60450,AT1G60590,AT1G60680,AT1G60870,AT1G60940,AT1G61095,AT1G61260,AT1G61350,AT1G61600,AT1G61660,AT1G61740,AT1G61800,AT1G62250,AT1G62280,AT1G62300,AT1G62360,AT1G62480,AT1G62510,AT1G62540,AT1G62560,AT1G62570,AT1G62660,AT1G62710,AT1G63010,AT1G63110,AT1G63270,AT1G63290,AT1G63310,AT1G63420,AT1G63690,AT1G63840,AT1G63910,AT1G64130,AT1G64360,AT1G64370,AT1G64610,AT1G64620,AT1G64650,AT1G64700,AT1G64770,AT1G64780,AT1G64850,AT1G64920,AT1G64980,AT1G65295,AT1G65380,AT1G65450,AT1G65480,AT1G65500,AT1G65590,AT1G65620,AT1G65720,AT1G65730,AT1G65800,AT1G65860,AT1G65960,AT1G65970,AT1G65980,AT1G66150,AT1G66180,AT1G66200,AT1G66230,AT1G66240,AT1G66350,AT1G66870,AT1G66970,AT1G67020,AT1G67040,AT1G67050,AT1G67080,AT1G67330,AT1G67510,AT1G67600,AT1G67750,AT1G67860,AT1G67870,AT1G67900,AT1G68020,AT1G68170,AT1G68230,AT1G68350,AT1G68490,AT1G68520,AT1G68530,AT1G68560,AT1G68570,AT1G68610,AT1G68620,AT1G68670,AT1G68690,AT1G68710,AT1G68725,AT1G68740,AT1G68760,AT1G68810,AT1G68850,AT1G69040,AT1G69080,AT1G69120,AT1G69170,AT1G69230,AT1G69440,AT1G69530,AT1G69580,AT1G69600,AT1G69700,AT1G69780,AT1G69790,AT1G69810,AT1G69840,AT1G69850,AT1G69870,AT1G69890,AT1G69910,AT1G69970,AT1G70130,AT1G70230,AT1G70290,AT1G70390,AT1G70550,AT1G70660,AT1G70680,AT1G70700,AT1G70710,AT1G70720,AT1G70800,AT1G70810,AT1G70830,AT1G70880,AT1G70890,AT1G70940,AT1G70970,AT1G70990,AT1G71050,AT1G71140,AT1G71380,AT1G71692,AT1G71695,AT1G72110,AT1G72120,AT1G72140,AT1G72160,AT1G72180,AT1G72230,AT1G72240,AT1G72260,AT1G72300,AT1G72310,AT1G72450,AT1G72470,AT1G72610,AT1G72690,AT1G72810,AT1G72830,AT1G72900,AT1G72910,AT1G72940,AT1G72970,AT1G73000,AT1G73010,AT1G73080,AT1G73110,AT1G73220,AT1G73325,AT1G73390,AT1G73410,AT1G73500,AT1G73600,AT1G73620,AT1G73630,AT1G73640,AT1G73700,AT1G73740,AT1G73860,AT1G73870,AT1G74020,AT1G74160,AT1G74210,AT1G74260,AT1G74340,AT1G74380,AT1G74430,AT1G74440,AT1G74450,AT1G74520,AT1G74670,AT1G74740,AT1G74800,AT1G74890,AT1G74940,AT1G75040,AT1G75190,AT1G75270,AT1G75280,AT1G75290,AT1G75300,AT1G75380,AT1G75390,AT1G75410,AT1G75440,AT1G75450,AT1G75500,AT1G75580,AT1G75590,AT1G75680,AT1G75710,AT1G75750,AT1G75800,AT1G75810,AT1G76020,AT1G76080,AT1G76090,AT1G76160,AT1G76360,AT1G76520,AT1G76620,AT1G76670,AT1G76690,AT1G76800,AT1G76990,AT1G77080,AT1G77380,AT1G77450,AT1G77570,AT1G77610,AT1G77660,AT1G77870,AT1G77930,AT1G78000,AT1G78020,AT1G78080,AT1G78170,AT1G78230,AT1G78240,AT1G78290,AT1G78370,AT1G78460,AT1G78490,AT1G78570,AT1G78610,AT1G78670,AT1G78780,AT1G78815,AT1G78820,AT1G78850,AT1G79030,AT1G79340,AT1G79410,AT1G79420,AT1G79430,AT1G79620,AT1G79670,AT1G79720,AT1G79760,AT1G79770,AT1G80050,AT1G80130,AT1G80280,AT1G80300,AT1G80310,AT1G80440,AT1G80520,AT1G80760,AT1G80820,AT1G80830,AT1G80840,AT1G80940,AT2G01300,AT2G01340,AT2G01410,AT2G01420,AT2G01450,AT2G01520,AT2G01570,AT2G01590,AT2G01630,AT2G01660,AT2G01680,AT2G01760,AT2G01850,AT2G01890,AT2G01950,AT2G02000,AT2G02010,AT2G02320,AT2G02780,AT2G02860,AT2G02990,AT2G03090,AT2G03200,AT2G03440,AT2G03550,AT2G03710,AT2G03890,AT2G04160,AT2G04240,AT2G04280,AT2G04570,AT2G05260,AT2G05320,AT2G05520,AT2G05560,AT2G05790,AT2G05910,AT2G05940,AT2G06850,AT2G07760,AT2G10930,AT2G10940,AT2G11390,AT2G11520,AT2G11560,AT2G11570,AT2G12400,AT2G12480,AT2G13570,AT2G13610,AT2G13720,AT2G13810,AT2G13820,AT2G13970,AT2G14890,AT2G15010,AT2G15020,AT2G15050,AT2G15310,AT2G15580,AT2G15620,AT2G16120,AT2G16280,AT2G16500,AT2G16620,AT2G16630,AT2G16660,AT2G16700,AT2G16750,AT2G16830,AT2G16900,AT2G16980,AT2G16990,AT2G17130,AT2G17150,AT2G17230,AT2G17260,AT2G17290,AT2G17450,AT2G17480,AT2G17760,AT2G17820,AT2G26320,AT2G18280,AT2G18570,AT2G18890,AT2G18960,AT2G19130,AT2G19170,AT2G19310,AT2G19570,AT2G19580,AT2G19590,AT2G19650,AT2G19710,AT2G19780,AT2G19800,AT2G20100,AT2G20180,AT2G20230,AT2G20440,AT2G20570,AT2G20630,AT2G20880,AT2G20900,AT2G21050,AT2G21140,AT2G21180,AT2G21190,AT2G21210,AT2G21220,AT2G21380,AT2G21620,AT2G21780,AT2G22070,AT2G22125,AT2G22170,AT2G22190,AT2G22470,AT2G22500,AT2G22670,AT2G22680,AT2G22780,AT2G22800,AT2G22930,AT2G22970,AT2G22990,AT2G23010,AT2G23120,AT2G23130,AT2G23170,AT2G23200,AT2G23290,AT2G23300,AT2G23330,AT2G23450,AT2G23540,AT2G23600,AT2G23610,AT2G23760,AT2G23840,AT2G24040,AT2G24180,AT2G24200,AT2G24220,AT2G24230,AT2G24270,AT2G24280,AT2G24550,AT2G24940,AT2G25220,AT2G25430,AT2G25450,AT2G25490,AT2G25510,AT2G25530,AT2G25540,AT2G25625,AT2G25790,AT2G25990,AT2G26080,AT2G26110,AT2G26300,AT2G26330,AT2G26360,AT2G26440,AT2G26510,AT2G26520,AT2G26530,AT2G26800,AT2G26890,AT2G26910,AT2G27000,AT2G27050,AT2G27130,AT2G27230,AT2G27500,AT2G27520,AT2G27860,AT2G27880,AT2G27920,AT2G28110,AT2G28120,AT2G28200,AT2G28305,AT2G28350,AT2G28400,AT2G28460,AT2G28760,AT2G28790,AT2G28810,AT2G28870,AT2G28900,AT2G28950,AT2G28970,AT2G29050,AT2G29090,AT2G29130,AT2G29310,AT2G29320,AT2G29370,AT2G29650,AT2G29660,AT2G29670,AT2G29730,AT2G29970,AT2G30010,AT2G30040,AT2G30070,AT2G30080,AT2G30150,AT2G30230,AT2G30300,AT2G30360,AT2G30520,AT2G30540,AT2G30560,AT2G30860,AT2G30870,AT2G31120,AT2G31280,AT2G31390,AT2G31570,AT2G31880,AT2G31930,AT2G31960,AT2G32200,AT2G32210,AT2G32280,AT2G32290,AT2G32450,AT2G32490,AT2G32530,AT2G32580,AT2G32690,AT2G32790,AT2G32800,AT2G32810,AT2G32870,AT2G33310,AT2G33360,AT2G33380,AT2G33390,AT2G33480,AT2G33510,AT2G33530,AT2G33770,AT2G33810,AT2G33860,AT2G34070,AT2G34150,AT2G34170,AT2G34320,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AT3G28960,AT3G29030,AT3G29075,AT3G29200,AT3G29320,AT3G29360,AT3G29400,AT3G29575,AT3G29690,AT3G29810,AT3G30280,AT3G30300,AT3G30390,AT3G30460,AT3G30775,AT3G31390,AT3G42120,AT3G42560,AT3G43190,AT3G43270,AT3G43430,AT3G43720,AT3G43800,AT3G44220,AT3G44280,AT3G44310,AT3G44450,AT3G44610,AT3G44820,AT3G44870,AT3G45010,AT3G45070,AT3G45130,AT3G45140,AT3G45160,AT3G45250,AT3G45500,AT3G45640,AT3G45680,AT3G45730,AT3G45780,AT3G45870,AT3G45960,AT3G46140,AT3G46170,AT3G46290,AT3G46310,AT3G46510,AT3G46550,AT3G46660,AT3G46670,AT3G46780,AT3G46860,AT3G47000,AT3G47090,AT3G47250,AT3G47360,AT3G47420,AT3G47540,AT3G47560,AT3G47600,AT3G47980,AT3G48100,AT3G48230,AT3G48290,AT3G48460,AT3G48550,AT3G48720,AT3G48740,AT3G48970,AT3G49120,AT3G49220,AT3G49260,AT3G49360,AT3G49570,AT3G49580,AT3G49720,AT3G49880,AT3G50220,AT3G50530,AT3G50560,AT3G50570,AT3G50630,AT3G50660,AT3G50780,AT3G50800,AT3G50930,AT3G51380,AT3G51430,AT3G51480,AT3G51500,AT3G51550,AT3G51600,AT3G51670,AT3G51730,AT3G51860,AT3G51920,AT3G51970,AT3G52370,AT3G52400,AT3G52460,AT3G52470,AT3G52480,AT3G52500,AT3G52740,AT3G52800,AT3G52820,AT3G52840,AT3G52880,AT3G53140,AT3G53350,AT3G53420,AT3G53520,AT3G53530,AT3G53620,AT3G53690,AT3G53950,AT3G53960,AT3G53980,AT3G53990,AT3G54040,AT3G54080,AT3G54120,AT3G54140,AT3G54150,AT3G54200,AT3G54340,AT3G54400,AT3G54410,AT3G54430,AT3G54600,AT3G54820,AT3G54950,AT3G55190,AT3G55230,AT3G55240,AT3G55430,AT3G55500,AT3G55740,AT3G55890,AT3G55980,AT3G55990,AT3G56170,AT3G56200,AT3G56240,AT3G56260,AT3G56440,AT3G56620,AT3G56950,AT3G57020,AT3G57270,AT3G57330,AT3G57340,AT3G57380,AT3G57510,AT3G57690,AT3G57700,AT3G57810,AT3G58000,AT3G58410,AT3G58750,AT3G58990,AT3G59060,AT3G59080,AT3G59310,AT3G59320,AT3G59440,AT3G59690,AT3G59810,AT3G59880,AT3G59900,AT3G59910,AT3G60030,AT3G60070,AT3G60160,AT3G60280,AT3G60340,AT3G60420,AT3G60450,AT3G60690,AT3G60890,AT3G60900,AT3G60930,AT3G61080,AT3G61250,AT3G61430,AT3G61460,AT3G61490,AT3G61550,AT3G61750,AT3G61820,AT3G61910,AT3G61970,AT3G61980,AT3G62020,AT3G62040,AT3G62420,AT3G62630,AT3G62650,AT3G62700,AT3G62720,AT3G62820,AT3G62950,AT3G62960,AT3G63050,AT3G63120,AT3G63140,AT3G63200,AT3G63440,AT4G00050,AT4G00150,AT4G00300,AT4G00330,AT4G00335,AT4G00670,AT4G00870,AT4G00880,AT4G01070,AT4G01080,AT4G01140,AT4G01410,AT4G01430,AT4G01440,AT4G01480,AT4G01550,AT4G01600,AT4G01680,AT4G01850,AT4G01950,AT4G02100,AT4G02290,AT4G02300,AT4G02410,AT4G02520,AT4G02630,AT4G02670,AT4G03190,AT4G03210,AT4G03340,AT4G03370,AT4G03420,AT4G03560,AT4G04090,AT4G04210,AT4G04450,AT4G04545,AT4G04620,AT4G04650,AT4G04830,AT4G04890,AT4G04960,AT4G05010,AT4G05240,AT4G05590,AT4G07800,AT4G08080,AT4G08150,AT4G08160,AT4G08300,AT4G08430,AT4G08680,AT4G08685,AT4G08850,AT4G08870,AT4G08910,AT4G08930,AT4G08980,AT4G09030,AT4G09500,AT4G09750,AT4G09810,AT4G09890,AT4G09960,AT4G10060,AT4G10140,AT4G10170,AT4G10270,AT4G10290,AT4G10300,AT4G10310,AT4G10360,AT4G10380,AT4G10390,AT4G10770,AT4G10840,AT4G11010,AT4G11020,AT4G11280,AT4G11320,AT4G11470,AT4G11890,AT4G11990,AT4G12080,AT4G12250,AT4G12390,AT4G12410,AT4G12420,AT4G12730,AT4G12870,AT4G12880,AT4G12890,AT4G12980,AT4G13000,AT4G13340,AT4G13450,AT4G13580,AT4G13770,AT4G13930,AT4G13950,AT4G14010,AT4G14020,AT4G14040,AT4G14090,AT4G14096,AT4G14130,AT4G14360,AT4G14365,AT4G14580,AT4G14620,AT4G14880,AT4G15160,AT4G15200,AT4G15440,AT4G15490,AT4G15530,AT4G15545,AT4G15550,AT4G15620,AT4G15920,AT4G16000,AT4G16130,AT4G16190,AT4G16400,AT4G16590,AT4G16670,AT4G16730,AT4G16790,AT4G16990,AT4G17050,AT4G17080,AT4G17230,AT4G17340,AT4G17500,AT4G17670,AT4G17770,AT4G17840,AT4G17870,AT4G18030,AT4G18190,AT4G18250,AT4G18290,AT4G18390,AT4G18550,AT4G18570,AT4G18710,AT4G18780,AT4G18930,AT4G19120,AT4G19380,AT4G19420,AT4G19430,AT4G19670,AT4G19810,AT4G19900,AT4G20170,AT4G20210,AT4G20260,AT4G20270,AT4G20430,AT4G20800,AT4G20820,AT4G21310,AT4G21590,AT4G21620,AT4G21640,AT4G21760,AT4G21930,AT4G21960,AT4G21990,AT4G22010,AT4G22110,AT4G22190,AT4G22240,AT4G22270,AT4G22400,AT4G22570,AT4G22580,AT4G22590,AT4G22680,AT4G22710,AT4G23170,AT4G23180,AT4G23260,AT4G23340,AT4G23400,AT4G23410,AT4G23440,AT4G23600,AT4G23670,AT4G23680,AT4G23690,AT4G23790,AT4G23990,AT4G24060,AT4G24120,AT4G24140,AT4G24380,AT4G24510,AT4G24570,AT4G24660,AT4G24780,AT4G24805,AT4G24960,AT4G24990,AT4G25010,AT4G25100,AT4G25640,AT4G25810,AT4G25820,AT4G25860,AT4G25960,AT4G25990,AT4G26070,AT4G26080,AT4G26270,AT4G26290,AT4G26320,AT4G26380,AT4G26480,AT4G26520,AT4G26530,AT4G26580,AT4G26690,AT4G26700,AT4G26790,AT4G26940,AT4G27210,AT4G27260,AT4G27280,AT4G27360,AT4G27420,AT4G27560,AT4G27780,AT4G28085,AT4G28150,AT4G28160,AT4G28240,AT4G28250,AT4G28270,AT4G28280,AT4G28290,AT4G28330,AT4G28340,AT4G28380,AT4G28400,AT4G28490,AT4G28500,AT4G28760,AT4G28780,AT4G29050,AT4G29080,AT4G29090,AT4G29100,AT4G29190,AT4G29230,AT4G29240,AT4G29310,AT4G29570,AT4G29610,AT4G29620,AT4G29650,AT4G29680,AT4G29700,AT4G29950,AT4G30270,AT4G30340,AT4G30380,AT4G30400,AT4G30440,AT4G30450,AT4G30460,AT4G30550,AT4G30650,AT4G30830,AT4G31170,AT4G31500,AT4G31590,AT4G31650,AT4G31730,AT4G31860,AT4G31870,AT4G31910,AT4G31920,AT4G32000,AT4G32150,AT4G32280,AT4G32380,AT4G32390,AT4G32410,AT4G32480,AT4G32500,AT4G32710,AT4G32880,AT4G32970,AT4G32980,AT4G33010,AT4G33040,AT4G33050,AT4G33300,AT4G33450,AT4G33550,AT4G33560,AT4G33666,AT4G33790,AT4G33810,AT4G33820,AT4G33920,AT4G34000,AT4G34050,AT4G34160,AT4G34180,AT4G34230,AT4G34500,AT4G34560,AT4G34590,AT4G34600,AT4G34630,AT4G34920,AT4G34990,AT4G35060,AT4G35090,AT4G35100,AT4G35240,AT4G35280,AT4G35320,AT4G35350,AT4G35470,AT4G35840,AT4G36040,AT4G36220,AT4G36240,AT4G36360,AT4G36380,AT4G36540,AT4G36550,AT4G36640,AT4G36660,AT4G36710,AT4G36790,AT4G36860,AT4G36890,AT4G36920,AT4G36990,AT4G37010,AT4G37220,AT4G37240,AT4G37310,AT4G37450,AT4G37470,AT4G37520,AT4G37530,AT4G37540,AT4G37560,AT4G37760,AT4G37790,AT4G37800,AT4G37870,AT4G37930,AT4G37980,AT4G38050,AT4G38060,AT4G38400,AT4G38520,AT4G38620,AT4G38650,AT4G38690,AT4G38770,AT4G38810,AT4G38840,AT4G38850,AT4G38860,AT4G39210,AT4G39330,AT4G39350,AT4G39510,AT4G39640,AT4G39840,AT4G39940,AT4G39970,AT4G40010,AT4G40040,AT5G01090,AT5G01180,AT5G01200,AT5G01210,AT5G01240,AT5G01360,AT5G01520,AT5G01570,AT5G01620,AT5G01640,AT5G01720,AT5G01750,AT5G01790,AT5G01800,AT5G01820,AT5G01850,AT5G01880,AT5G01890,AT5G01900,AT5G01920,AT5G01930,AT5G02020,AT5G02030,AT5G02090,AT5G02230,AT5G02260,AT5G02380,AT5G02460,AT5G02500,AT5G02580,AT5G02620,AT5G02630,AT5G02640,AT5G02750,AT5G02800,AT5G02840,AT5G02890,AT5G03040,AT5G03050,AT5G03140,AT5G03170,AT5G03260,AT5G03380,AT5G03455,AT5G03630,AT5G03660,AT5G03760,AT5G03880,AT5G04080,AT5G04140,AT5G04530,AT5G04760,AT5G04890,AT5G04930,AT5G05170,AT5G05220,AT5G05340,AT5G05790,AT5G05960,AT5G06190,AT5G06250,AT5G06270,AT5G06510,AT5G06560,AT5G06620,AT5G06700,AT5G06720,AT5G06839,AT5G06860,AT5G06960,AT5G07000,AT5G07110,AT5G07220,AT5G07240,AT5G07250,AT5G07300,AT5G07470,AT5G07530,AT5G07580,AT5G07740,AT5G07800,AT5G07870,AT5G07990,AT5G08250,AT5G08260,AT5G08370,AT5G08460,AT5G08640,AT5G09220,AT5G09440,AT5G09670,AT5G09980,AT5G10260,AT5G10430,AT5G10520,AT5G10580,AT5G10770,AT5G10860,AT5G10930,AT5G11000,AT5G11070,AT5G11160,AT5G11360,AT5G11670,AT5G11720,AT5G11790,AT5G11840,AT5G11930,AT5G11970,AT5G12130,AT5G12140,AT5G12170,AT5G12400,AT5G12420,AT5G12450,AT5G12870,AT5G13180,AT5G13240,AT5G13320,AT5G13330,AT5G13400,AT5G13550,AT5G13670,AT5G13720,AT5G13860,AT5G14150,AT5G14300,AT5G14570,AT5G14740,AT5G14880,AT5G14940,AT5G15020,AT5G15050,AT5G15080,AT5G15210,AT5G15350,AT5G15500,AT5G15780,AT5G15800,AT5G15970,AT5G16030,AT5G16410,AT5G16440,AT5G16450,AT5G16490,AT5G16570,AT5G16730,AT5G17010,AT5G17330,AT5G17420,AT5G17450,AT5G17460,AT5G17600,AT5G17640,AT5G17700,AT5G17860,AT5G17920,AT5G17950,AT5G17980,AT5G18010,AT5G18020,AT5G18030,AT5G18050,AT5G18060,AT5G18080,AT5G18130,AT5G18150,AT5G18260,AT5G18290,AT5G19040,AT5G19140,AT5G19220,AT5G19530,AT5G19600,AT5G19860,AT5G20230,AT5G20240,AT5G20500,AT5G20830,AT5G21090,AT5G21105,AT5G21482,AT5G21910,AT5G22050,AT5G22090,AT5G22200,AT5G22460,AT5G22470,AT5G22560,AT5G22860,AT5G22890,AT5G22940,AT5G23170,AT5G23210,AT5G23280,AT5G23370,AT5G23390,AT5G23400,AT5G23660,AT5G23760,AT5G23810,AT5G23860,AT5G23940,AT5G24030,AT5G24150,AT5G24210,AT5G24420,AT5G24530,AT5G24580,AT5G24660,AT5G24770,AT5G24780,AT5G24790,AT5G24800,AT5G25190,AT5G25220,AT5G25280,AT5G25610,AT5G25880,AT5G25980,AT5G26000,AT5G26220,AT5G26660,AT5G26700,AT5G27210,AT5G27380,AT5G28020,AT5G28050,AT5G32161,AT5G32475,AT5G32484,AT5G35170,AT5G35460,AT5G35475,AT5G35550,AT5G35740,AT5G35860,AT5G35960,AT5G35970,AT5G36040,AT5G36130,AT5G36260,AT5G36270,AT5G36700,AT5G37300,AT5G37660,AT5G37730,AT5G37770,AT5G37820,AT5G38410,AT5G38540,AT5G38700,AT5G38800,AT5G38895,AT5G38900,AT5G38970,AT5G38980,AT5G39050,AT5G39090,AT5G39110,AT5G39180,AT5G39220,AT5G39260,AT5G39320,AT5G39670,AT5G39730,AT5G39860,AT5G40020,AT5G40150,AT5G40160,AT5G40230,AT5G40380,AT5G40470,AT5G40630,AT5G40680,AT5G40890,AT5G40910,AT5G40960,AT5G40980,AT5G41050,AT5G41400,AT5G41440,AT5G41800,AT5G41900,AT5G42030,AT5G42050,AT5G42090,AT5G42180,AT5G42210,AT5G42230,AT5G42530,AT5G42650,AT5G42870,AT5G42990,AT5G43030,AT5G43150,AT5G43180,AT5G43190,AT5G43270,AT5G43440,AT5G43450,AT5G43560,AT5G43700,AT5G43740,AT5G43760,AT5G43870,AT5G43880,AT5G43950,AT5G44030,AT5G44110,AT5G44130,AT5G44360,AT5G44410,AT5G44470,AT5G44530,AT5G44580,AT5G44610,AT5G44780,AT5G44790,AT5G44860,AT5G45110,AT5G45280,AT5G45320,AT5G45650,AT5G45670,AT5G45720,AT5G45800,AT5G45880,AT5G46010,AT5G46110,AT5G46240,AT5G46260,AT5G46300,AT5G46330,AT5G46470,AT5G46530,AT5G46590,AT5G46640,AT5G46790,AT5G47120,AT5G47220,AT5G47230,AT5G47240,AT5G47250,AT5G47330,AT5G47370,AT5G47445,AT5G47530,AT5G47610,AT5G47640,AT5G47800,AT5G47870,AT5G48150,AT5G48180,AT5G48300,AT5G48560,AT5G48800,AT5G48810,AT5G48850,AT5G49040,AT5G49050,AT5G49180,AT5G49230,AT5G49280,AT5G49320,AT5G49550,AT5G49630,AT5G49660,AT5G49720,AT5G49810,AT5G49900,AT5G49960,AT5G50130,AT5G50150,AT5G50160,AT5G50790,AT5G50800,AT5G50820,AT5G50980,AT5G51190,AT5G51520,AT5G51640,AT5G51750,AT5G51810,AT5G51890,AT5G51970,AT5G52020,AT5G52310,AT5G52450,AT5G52510,AT5G52950,AT5G53030,AT5G53120,AT5G53140,AT5G53200,AT5G53250,AT5G53590,AT5G53730,AT5G53830,AT5G53880,AT5G53900,AT5G54130,AT5G54145,AT5G54160,AT5G54170,AT5G54490,AT5G54510,AT5G54630,AT5G54660,AT5G54670,AT5G54690,AT5G54730,AT5G54770,AT5G54840,AT5G54850,AT5G54940,AT5G54980,AT5G55050,AT5G55180,AT5G55250,AT5G55400,AT5G55460,AT5G55550,AT5G55570,AT5G55620,AT5G55910,AT5G55930,AT5G55950,AT5G56040,AT5G56170,AT5G56350,AT5G56530,AT5G56540,AT5G56630,AT5G56750,AT5G56840,AT5G56870,AT5G56890,AT5G57040,AT5G57050,AT5G57240,AT5G57270,AT5G57520,AT5G57800,AT5G57840,AT5G57900,AT5G58120,AT5G58140,AT5G58310,AT5G58320,AT5G58350,AT5G58500,AT5G58520,AT5G58570,AT5G58670,AT5G58770,AT5G58930,AT5G59130,AT5G59310,AT5G59320,AT5G59450,AT5G59700,AT5G59920,AT5G60020,AT5G60130,AT5G60140,AT5G60380,AT5G60410,AT5G60450,AT5G60480,AT5G60490,AT5G60710,AT5G60720,AT5G60800,AT5G60860,AT5G60910,AT5G60920,AT5G61010,AT5G61240,AT5G61250,AT5G61340,AT5G61560,AT5G61590,AT5G61600,AT5G61650,AT5G61820,AT5G61980,AT5G62140,AT5G62150,AT5G62180,AT5G62210,AT5G62220,AT5G62350,AT5G62360,AT5G62430,AT5G62470,AT5G62680,AT5G62740,AT5G62820,AT5G62890,AT5G62920,AT5G63140,AT5G63180,AT5G63350,AT5G63410,AT5G63580,AT5G63670,AT5G63790,AT5G63860,AT5G63940,AT5G64080,AT5G64190,AT5G64240,AT5G64260,AT5G64410,AT5G64430,AT5G64440,AT5G64510,AT5G64550,AT5G64740,AT5G64770,AT5G64870,AT5G64900,AT5G65160,AT5G65170,AT5G65390,AT5G65480,AT5G65500,AT5G65640,AT5G65660,AT5G65670,AT5G65730,AT5G65860,AT5G65870,AT5G65990,AT5G66070,AT5G66170,AT5G66250,AT5G66350,AT5G66440,AT5G66580,AT5G66630,AT5G66650,AT5G66940,AT5G67110,AT5G67130,AT5G67140,AT5G67150,AT5G67190,AT5G67200,AT5G67280,AT5G67300,AT5G67360,AT5G67420,AT5G67460,AT5G67470,AT5G67480 DAY_EP_DIFF EP generated from the list of differentiall expressed genes using p -value < 0.05. (Table S5 PubmedID:18923020) AT1G01140,AT1G01320,AT1G01370,AT1G01770,AT1G01840,AT1G01860,AT1G01930,AT1G02150,AT1G02280,AT1G02330,AT1G02580,AT1G02690,AT1G02730,AT1G02770,AT1G02810,AT1G02840,AT1G02860,AT1G02940,AT1G03100,AT1G03180,AT1G03270,AT1G03280,AT1G03300,AT1G03360,AT1G03440,AT1G03445,AT1G03457,AT1G03470,AT1G03475,AT1G03510,AT1G03530,AT1G03630,AT1G03650,AT1G03687,AT1G03780,AT1G03800,AT1G03830,AT1G03860,AT1G03890,AT1G03980,AT1G04030,AT1G04070,AT1G04170,AT1G04190,AT1G04310,AT1G04380,AT1G04445,AT1G04520,AT1G04590,AT1G04620,AT1G04645,AT1G04650,AT1G04730,AT1G04760,AT1G04870,AT1G04880,AT1G04920,AT1G04985,AT1G05080,AT1G05160,AT1G05180,AT1G05190,AT1G05210,AT1G05220,AT1G05350,AT1G05370,AT1G05385,AT1G05410,AT1G05440,AT1G05460,AT1G05510,AT1G05630,AT1G05730,AT1G06190,AT1G06590,AT1G06690,AT1G07240,AT1G07320,AT1G07370,AT1G07400,AT1G07473,AT1G07650,AT1G07690,AT1G07790,AT1G07840,AT1G08000,AT1G08035,AT1G08050,AT1G08540,AT1G08550,AT1G08560,AT1G08610,AT1G08630,AT1G08680,AT1G08780,AT1G08860,AT1G08880,AT1G09290,AT1G09320,AT1G09420,AT1G09470,AT1G09480,AT1G09500,AT1G09510,AT1G09640,AT1G09660,AT1G09740,AT1G09760,AT1G09795,AT1G09830,AT1G09930,AT1G10010,AT1G10230,AT1G10310,AT1G10360,AT1G10385,AT1G10522,AT1G10680,AT1G10780,AT1G10790,AT1G10910,AT1G10930,AT1G11070,AT1G11400,AT1G11430,AT1G11450,AT1G11480,AT1G11540,AT1G11750,AT1G11780,AT1G11810,AT1G12080,AT1G12170,AT1G12190,AT1G12270,AT1G12370,AT1G12560,AT1G12800,AT1G12940,AT1G13270,AT1G13330,AT1G13590,AT1G13650,AT1G13680,AT1G13690,AT1G13730,AT1G13950,AT1G14020,AT1G14060,AT1G14080,AT1G14210,AT1G14260,AT1G14410,AT1G14490,AT1G14580,AT1G14610,AT1G14620,AT1G14687,AT1G15000,AT1G15020,AT1G15110,AT1G15180,AT1G15290,AT1G15300,AT1G15310,AT1G15320,AT1G15380,AT1G15390,AT1G15420,AT1G15430,AT1G15440,AT1G15480,AT1G15660,AT1G15790,AT1G15940,AT1G16070,AT1G16280,AT1G16290,AT1G16330,AT1G16445,AT1G16500,AT1G16630,AT1G16640,AT1G16980,AT1G17020,AT1G17030,AT1G17130,AT1G17220,AT1G17240,AT1G17460,AT1G17510,AT1G17580,AT1G17640,AT1G17780,AT1G17850,AT1G17870,AT1G17880,AT1G17960,AT1G18280,AT1G18350,AT1G18370,AT1G18450,AT1G18500,AT1G18540,AT1G18610,AT1G18940,AT1G19000,AT1G19010,AT1G19060,AT1G19080,AT1G19100,AT1G19320,AT1G19340,AT1G19350,AT1G19490,AT1G19600,AT1G19720,AT1G19950,AT1G20060,AT1G20140,AT1G20220,AT1G20370,AT1G20480,AT1G20610,AT1G20710,AT1G20720,AT1G20795,AT1G20800,AT1G20930,AT1G20940,AT1G21670,AT1G21695,AT1G21890,AT1G21970,AT1G22110,AT1G22120,AT1G22260,AT1G22275,AT1G22660,AT1G22670,AT1G22780,AT1G23160,AT1G23180,AT1G23280,AT1G23320,AT1G23400,AT1G23410,AT1G23720,AT1G23770,AT1G23870,AT1G23950,AT1G24090,AT1G24130,AT1G24240,AT1G24265,AT1G24310,AT1G24570,AT1G25260,AT1G25270,AT1G25350,AT1G25540,AT1G25550,AT1G26160,AT1G26330,AT1G26840,AT1G26910,AT1G27240,AT1G27285,AT1G27400,AT1G27510,AT1G27680,AT1G27860,AT1G27880,AT1G28030,AT1G28300,AT1G28350,AT1G28370,AT1G28530,AT1G28640,AT1G28710,AT1G29010,AT1G29030,AT1G29070,AT1G29080,AT1G29220,AT1G29530,AT1G29860,AT1G30050,AT1G30070,AT1G30110,AT1G30170,AT1G30460,AT1G30480,AT1G30520,AT1G30610,AT1G30690,AT1G30710,AT1G30820,AT1G30880,AT1G31180,AT1G31210,AT1G31250,AT1G31460,AT1G31530,AT1G31630,AT1G31660,AT1G31710,AT1G31760,AT1G31817,AT1G31860,AT1G31930,AT1G32190,AT1G32280,AT1G32540,AT1G32550,AT1G32570,AT1G32760,AT1G33040,AT1G33055,AT1G33140,AT1G33770,AT1G33930,AT1G34180,AT1G34210,AT1G34260,AT1G34430,AT1G34650,AT1G34770,AT1G34904,AT1G35040,AT1G35183,AT1G35530,AT1G35900,AT1G36180,AT1G36340,AT1G41880,AT1G42110,AT1G42410,AT1G42430,AT1G42700,AT1G42980,AT1G43670,AT1G43860,AT1G43900,AT1G44000,AT1G44090,AT1G44110,AT1G44900,AT1G45100,AT1G45180,AT1G45230,AT1G47270,AT1G47290,AT1G47490,AT1G47655,AT1G47760,AT1G47840,AT1G48050,AT1G48160,AT1G48310,AT1G48370,AT1G48380,AT1G48390,AT1G48570,AT1G48630,AT1G48910,AT1G48930,AT1G48950,AT1G48970,AT1G49010,AT1G49120,AT1G49160,AT1G49190,AT1G49290,AT1G49480,AT1G49530,AT1G49540,AT1G49760,AT1G49770,AT1G49810,AT1G49910,AT1G50110,AT1G50240,AT1G50380,AT1G50400,AT1G50490,AT1G50680,AT1G50790,AT1G50820,AT1G50840,AT1G50950,AT1G50980,AT1G51040,AT1G51130,AT1G51210,AT1G51240,AT1G51290,AT1G51580,AT1G51630,AT1G51710,AT1G51730,AT1G51910,AT1G51960,AT1G52160,AT1G52270,AT1G52380,AT1G52510,AT1G52620,AT1G52890,AT1G52900,AT1G52930,AT1G52980,AT1G53070,AT1G53140,AT1G53240,AT1G53380,AT1G53490,AT1G53520,AT1G53690,AT1G53800,AT1G54090,AT1G54115,AT1G54310,AT1G54620,AT1G54860,AT1G54980,AT1G55030,AT1G55150,AT1G55490,AT1G55500,AT1G55550,AT1G55660,AT1G55810,AT1G55820,AT1G55900,AT1G56110,AT1G56170,AT1G56200,AT1G56400,AT1G58470,AT1G59540,AT1G59670,AT1G59800,AT1G59920,AT1G59990,AT1G60080,AT1G60160,AT1G60350,AT1G60390,AT1G60400,AT1G60410,AT1G60570,AT1G60690,AT1G60850,AT1G61320,AT1G61570,AT1G61630,AT1G61920,AT1G62170,AT1G62270,AT1G62390,AT1G62640,AT1G63100,AT1G63160,AT1G63170,AT1G63190,AT1G63205,AT1G63240,AT1G63440,AT1G63640,AT1G63660,AT1G63810,AT1G63930,AT1G63980,AT1G64290,AT1G64480,AT1G64550,AT1G64600,AT1G64760,AT1G64870,AT1G64880,AT1G65090,AT1G65240,AT1G65280,AT1G65300,AT1G65330,AT1G65360,AT1G65640,AT1G65770,AT1G65890,AT1G65990,AT1G66030,AT1G66040,AT1G66070,AT1G66130,AT1G66250,AT1G66430,AT1G66520,AT1G66620,AT1G66630,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AT3G54940,AT3G55010,AT3G55060,AT3G55150,AT3G55160,AT3G55170,AT3G55280,AT3G55340,AT3G55400,AT3G55460,AT3G55510,AT3G55580,AT3G55590,AT3G55610,AT3G55660,AT3G55800,AT3G55950,AT3G56100,AT3G56320,AT3G56330,AT3G56520,AT3G56570,AT3G56650,AT3G56680,AT3G56780,AT3G56850,AT3G56900,AT3G56910,AT3G57060,AT3G57080,AT3G57180,AT3G57200,AT3G57310,AT3G57360,AT3G57430,AT3G57550,AT3G57740,AT3G57860,AT3G57940,AT3G57950,AT3G58260,AT3G58360,AT3G58470,AT3G58520,AT3G58540,AT3G58650,AT3G58680,AT3G58960,AT3G59040,AT3G59170,AT3G59230,AT3G59260,AT3G59550,AT3G59590,AT3G59610,AT3G59630,AT3G59790,AT3G59820,AT3G59980,AT3G60000,AT3G60010,AT3G60080,AT3G60130,AT3G60140,AT3G60360,AT3G60770,AT3G60790,AT3G60840,AT3G61090,AT3G61100,AT3G61300,AT3G61500,AT3G61610,AT3G61640,AT3G61650,AT3G61660,AT3G61670,AT3G61780,AT3G62030,AT3G62110,AT3G62120,AT3G62160,AT3G62340,AT3G62870,AT3G62910,AT3G62940,AT3G63130,AT3G63170,AT3G63190,AT3G63250,AT3G63470,AT3G63480,AT3G63490,AT3G63510,AT3G66656,AT4G00140,AT4G00170,AT4G00240,AT4G00250,AT4G00370,AT4G00540,AT4G00620,AT4G00690,AT4G00700,AT4G00710,AT4G00760,AT4G00990,AT4G01030,AT4G01040,AT4G01120,AT4G01250,AT4G01270,AT4G01380,AT4G01500,AT4G01560,AT4G01580,AT4G01730,AT4G01800,AT4G01900,AT4G02040,AT4G02110,AT4G02150,AT4G02220,AT4G02230,AT4G02260,AT4G02380,AT4G02390,AT4G02450,AT4G02480,AT4G02830,AT4G02930,AT4G02990,AT4G03100,AT4G03110,AT4G03120,AT4G03150,AT4G03510,AT4G03916,AT4G04180,AT4G04460,AT4G04490,AT4G04580,AT4G04600,AT4G04940,AT4G04970,AT4G05190,AT4G05470,AT4G05490,AT4G05630,AT4G08210,AT4G08550,AT4G08600,AT4G09040,AT4G09060,AT4G09090,AT4G09160,AT4G09340,AT4G09480,AT4G09730,AT4G10160,AT4G10220,AT4G10410,AT4G10480,AT4G10490,AT4G10640,AT4G10780,AT4G11060,AT4G11080,AT4G11140,AT4G11240,AT4G11260,AT4G11310,AT4G11400,AT4G11510,AT4G11560,AT4G11790,AT4G11930,AT4G11970,AT4G12140,AT4G12510,AT4G12540,AT4G12600,AT4G12740,AT4G12830,AT4G13060,AT4G13090,AT4G13170,AT4G13220,AT4G13380,AT4G13490,AT4G13690,AT4G13780,AT4G13960,AT4G13990,AT4G14250,AT4G14330,AT4G14385,AT4G14520,AT4G14690,AT4G14770,AT4G14780,AT4G14790,AT4G14820,AT4G14870,AT4G14920,AT4G14930,AT4G14940,AT4G15040,AT4G15140,AT4G15510,AT4G15770,AT4G15830,AT4G15850,AT4G15860,AT4G15890,AT4G15910,AT4G16060,AT4G16080,AT4G16090,AT4G16155,AT4G16160,AT4G16390,AT4G16460,AT4G16540,AT4G16780,AT4G16800,AT4G17240,AT4G17505,AT4G17520,AT4G17540,AT4G17550,AT4G17600,AT4G17610,AT4G17720,AT4G17730,AT4G17760,AT4G17860,AT4G17895,AT4G18020,AT4G18100,AT4G18430,AT4G18870,AT4G19020,AT4G19130,AT4G19150,AT4G19710,AT4G19940,AT4G19970,AT4G20010,AT4G20020,AT4G20030,AT4G20070,AT4G20130,AT4G20160,AT4G20340,AT4G20850,AT4G21010,AT4G21020,AT4G21040,AT4G21080,AT4G21270,AT4G21380,AT4G21430,AT4G21610,AT4G21800,AT4G21820,AT4G21900,AT4G22030,AT4G22280,AT4G22320,AT4G22410,AT4G22970,AT4G23110,AT4G23120,AT4G23370,AT4G23530,AT4G23570,AT4G23750,AT4G23800,AT4G23920,AT4G24070,AT4G24110,AT4G24175,AT4G24240,AT4G24280,AT4G24500,AT4G24710,AT4G24750,AT4G24770,AT4G24790,AT4G25040,AT4G25050,AT4G25070,AT4G25140,AT4G25170,AT4G25260,AT4G25340,AT4G25370,AT4G25470,AT4G25530,AT4G25540,AT4G25630,AT4G25730,AT4G25900,AT4G25980,AT4G26030,AT4G26110,AT4G26140,AT4G26340,AT4G26370,AT4G26390,AT4G26430,AT4G26470,AT4G26660,AT4G26720,AT4G26760,AT4G26770,AT4G26810,AT4G26870,AT4G27010,AT4G27140,AT4G27270,AT4G27440,AT4G27480,AT4G27510,AT4G27660,AT4G27690,AT4G27890,AT4G28040,AT4G28050,AT4G28080,AT4G28100,AT4G28210,AT4G28220,AT4G28450,AT4G28510,AT4G28590,AT4G28820,AT4G28840,AT4G28920,AT4G28950,AT4G28990,AT4G29060,AT4G29150,AT4G29170,AT4G29200,AT4G29270,AT4G29360,AT4G29380,AT4G29400,AT4G29410,AT4G29550,AT4G29840,AT4G30030,AT4G30160,AT4G30290,AT4G30300,AT4G30320,AT4G30500,AT4G30590,AT4G30620,AT4G30720,AT4G30800,AT4G30850,AT4G30870,AT4G30930,AT4G31120,AT4G31210,AT4G31310,AT4G31390,AT4G31700,AT4G31790,AT4G31810,AT4G31840,AT4G31900,AT4G31990,AT4G32080,AT4G32100,AT4G32110,AT4G32460,AT4G32510,AT4G32720,AT4G32840,AT4G32915,AT4G33110,AT4G33220,AT4G33270,AT4G33280,AT4G33290,AT4G33330,AT4G33340,AT4G33400,AT4G33760,AT4G33870,AT4G33930,AT4G34290,AT4G34300,AT4G34330,AT4G34350,AT4G34440,AT4G34540,AT4G34670,AT4G34780,AT4G34970,AT4G35070,AT4G35230,AT4G35420,AT4G35730,AT4G36020,AT4G36090,AT4G36110,AT4G36290,AT4G36580,AT4G36590,AT4G36700,AT4G36930,AT4G37020,AT4G37090,AT4G37110,AT4G37190,AT4G37200,AT4G37210,AT4G37360,AT4G37410,AT4G37490,AT4G37510,AT4G37740,AT4G37910,AT4G37960,AT4G38000,AT4G38160,AT4G38180,AT4G38380,AT4G38470,AT4G38480,AT4G38780,AT4G39000,AT4G39460,AT4G39530,AT4G39620,AT4G39630,AT4G39670,AT4G39680,AT4G39740,AT4G39800,AT4G39860,AT4G40000,AT5G01060,AT5G01300,AT5G01340,AT5G01650,AT5G01910,AT5G02100,AT5G02160,AT5G02220,AT5G02250,AT5G02370,AT5G02450,AT5G02470,AT5G02570,AT5G02590,AT5G02610,AT5G02710,AT5G02820,AT5G02930,AT5G03200,AT5G03210,AT5G03480,AT5G03500,AT5G03510,AT5G03740,AT5G03780,AT5G03800,AT5G03810,AT5G03820,AT5G03870,AT5G03900,AT5G03930,AT5G03940,AT5G04210,AT5G04250,AT5G04260,AT5G04610,AT5G04620,AT5G04660,AT5G04810,AT5G04895,AT5G04900,AT5G05030,AT5G05120,AT5G05130,AT5G05180,AT5G05240,AT5G05260,AT5G05410,AT5G05470,AT5G05510,AT5G05580,AT5G05640,AT5G05710,AT5G05730,AT5G05760,AT5G05810,AT5G05940,AT5G05990,AT5G06000,AT5G06020,AT5G06030,AT5G06110,AT5G06150,AT5G06160,AT5G06280,AT5G06300,AT5G06350,AT5G06360,AT5G06380,AT5G06470,AT5G06540,AT5G06550,AT5G06830,AT5G06910,AT5G06920,AT5G07060,AT5G07090,AT5G07120,AT5G07160,AT5G07200,AT5G07210,AT5G07260,AT5G07280,AT5G07330,AT5G07400,AT5G07460,AT5G07500,AT5G07780,AT5G07810,AT5G07830,AT5G07850,AT5G07880,AT5G07900,AT5G08020,AT5G08030,AT5G08280,AT5G08400,AT5G08420,AT5G08450,AT5G08540,AT5G08550,AT5G08600,AT5G08620,AT5G08630,AT5G08730,AT5G09300,AT5G09360,AT5G09370,AT5G09380,AT5G09490,AT5G09570,AT5G09770,AT5G09790,AT5G09840,AT5G09910,AT5G10010,AT5G10160,AT5G10170,AT5G10220,AT5G10240,AT5G10510,AT5G10660,AT5G10690,AT5G10720,AT5G10820,AT5G10910,AT5G11030,AT5G11150,AT5G11220,AT5G11300,AT5G11450,AT5G11460,AT5G11500,AT5G11510,AT5G11530,AT5G11660,AT5G11780,AT5G11830,AT5G12060,AT5G12220,AT5G12360,AT5G12410,AT5G12460,AT5G12840,AT5G12930,AT5G12980,AT5G12990,AT5G13060,AT5G13210,AT5G13310,AT5G13600,AT5G13650,AT5G13830,AT5G13840,AT5G13880,AT5G13960,AT5G14010,AT5G14050,AT5G14100,AT5G14180,AT5G14250,AT5G14290,AT5G14320,AT5G14450,AT5G14460,AT5G14480,AT5G14520,AT5G14580,AT5G14640,AT5G14840,AT5G14910,AT5G14960,AT5G15070,AT5G15160,AT5G15520,AT5G15530,AT5G15610,AT5G15750,AT5G15760,AT5G15810,AT5G15940,AT5G16000,AT5G16130,AT5G16160,AT5G16250,AT5G16310,AT5G16360,AT5G16370,AT5G16390,AT5G16620,AT5G16630,AT5G16690,AT5G16770,AT5G16850,AT5G17070,AT5G17090,AT5G17100,AT5G17160,AT5G17270,AT5G17320,AT5G17370,AT5G17470,AT5G17540,AT5G17660,AT5G17670,AT5G17710,AT5G17780,AT5G17800,AT5G18180,AT5G18620,AT5G19050,AT5G19180,AT5G19510,AT5G20020,AT5G20040,AT5G20160,AT5G20710,AT5G20720,AT5G20930,AT5G21160,AT5G22110,AT5G22440,AT5G22550,AT5G22580,AT5G22600,AT5G22640,AT5G22650,AT5G22660,AT5G22740,AT5G22820,AT5G22920,AT5G22980,AT5G22990,AT5G23040,AT5G23290,AT5G23310,AT5G23430,AT5G23910,AT5G23920,AT5G23930,AT5G24130,AT5G24240,AT5G24260,AT5G24330,AT5G24440,AT5G24470,AT5G24490,AT5G24510,AT5G24600,AT5G24810,AT5G25080,AT5G25380,AT5G25470,AT5G25900,AT5G25950,AT5G26630,AT5G26680,AT5G26742,AT5G26860,AT5G27000,AT5G27030,AT5G27120,AT5G27230,AT5G27330,AT5G27430,AT5G27470,AT5G27770,AT5G28750,AT5G30495,AT5G30510,AT5G34940,AT5G35116,AT5G35360,AT5G35490,AT5G35540,AT5G35560,AT5G35660,AT5G35790,AT5G35920,AT5G36170,AT5G36250,AT5G36280,AT5G36680,AT5G36790,AT5G36870,AT5G36890,AT5G37010,AT5G37360,AT5G37520,AT5G37630,AT5G38110,AT5G38160,AT5G38170,AT5G38190,AT5G38210,AT5G38360,AT5G38450,AT5G38520,AT5G38680,AT5G38830,AT5G38890,AT5G38960,AT5G39350,AT5G39380,AT5G39440,AT5G39550,AT5G39560,AT5G39610,AT5G39640,AT5G39700,AT5G39720,AT5G39790,AT5G39890,AT5G40040,AT5G40260,AT5G40360,AT5G40400,AT5G40430,AT5G40570,AT5G40610,AT5G40700,AT5G40840,AT5G40930,AT5G40950,AT5G41070,AT5G41160,AT5G41250,AT5G41360,AT5G41510,AT5G41560,AT5G41630,AT5G41640,AT5G41710,AT5G41720,AT5G41830,AT5G41850,AT5G41880,AT5G42330,AT5G42700,AT5G42820,AT5G42900,AT5G43080,AT5G43090,AT5G43250,AT5G43500,AT5G43530,AT5G43860,AT5G43910,AT5G43960,AT5G44220,AT5G44450,AT5G44785,AT5G44830,AT5G45040,AT5G45450,AT5G45480,AT5G45600,AT5G45740,AT5G45775,AT5G45870,AT5G45920,AT5G45930,AT5G46050,AT5G46070,AT5G46270,AT5G46280,AT5G46290,AT5G46420,AT5G46430,AT5G46570,AT5G46580,AT5G46740,AT5G46780,AT5G46820,AT5G46840,AT5G47110,AT5G47190,AT5G47210,AT5G47400,AT5G47410,AT5G47550,AT5G47660,AT5G47670,AT5G47680,AT5G47900,AT5G48120,AT5G48230,AT5G48320,AT5G48450,AT5G48470,AT5G48600,AT5G48630,AT5G48650,AT5G48680,AT5G48750,AT5G48760,AT5G48770,AT5G48870,AT5G48960,AT5G48970,AT5G48980,AT5G49210,AT5G49310,AT5G49410,AT5G49560,AT5G49910,AT5G49930,AT5G49990,AT5G50040,AT5G50050,AT5G50070,AT5G50090,AT5G50170,AT5G50210,AT5G50470,AT5G50720,AT5G50730,AT5G50740,AT5G50770,AT5G50960,AT5G51100,AT5G51160,AT5G51210,AT5G51230,AT5G51600,AT5G51690,AT5G51730,AT5G51850,AT5G51960,AT5G52110,AT5G52150,AT5G52220,AT5G52230,AT5G52330,AT5G52380,AT5G52420,AT5G52440,AT5G52480,AT5G52570,AT5G52590,AT5G52620,AT5G52820,AT5G52910,AT5G52920,AT5G52960,AT5G53070,AT5G53170,AT5G53290,AT5G53490,AT5G53520,AT5G53600,AT5G53610,AT5G53620,AT5G53720,AT5G53780,AT5G53860,AT5G54180,AT5G54250,AT5G54300,AT5G54350,AT5G54530,AT5G54790,AT5G54930,AT5G54990,AT5G55080,AT5G55220,AT5G55230,AT5G55270,AT5G55280,AT5G55300,AT5G55360,AT5G55380,AT5G55450,AT5G55510,AT5G55590,AT5G55740,AT5G55920,AT5G56000,AT5G56100,AT5G56120,AT5G56150,AT5G56200,AT5G56260,AT5G56370,AT5G56430,AT5G56580,AT5G56590,AT5G56740,AT5G56780,AT5G56800,AT5G56950,AT5G56970,AT5G57000,AT5G57030,AT5G57140,AT5G57170,AT5G57180,AT5G57280,AT5G57410,AT5G57480,AT5G57740,AT5G57870,AT5G57950,AT5G57960,AT5G57980,AT5G58000,AT5G58080,AT5G58130,AT5G58190,AT5G58250,AT5G58280,AT5G58370,AT5G58480,AT5G58600,AT5G58820,AT5G58830,AT5G59010,AT5G59050,AT5G59070,AT5G59100,AT5G59110,AT5G59120,AT5G59170,AT5G59230,AT5G59240,AT5G59520,AT5G59590,AT5G59620,AT5G59720,AT5G59750,AT5G59790,AT5G59870,AT5G60040,AT5G60150,AT5G60220,AT5G60250,AT5G60340,AT5G60440,AT5G60560,AT5G60580,AT5G60690,AT5G60760,AT5G60960,AT5G61000,AT5G61300,AT5G61370,AT5G61390,AT5G61440,AT5G61460,AT5G61490,AT5G61640,AT5G61770,AT5G61880,AT5G61920,AT5G61970,AT5G62110,AT5G62190,AT5G62260,AT5G62300,AT5G62410,AT5G62440,AT5G62490,AT5G62500,AT5G62550,AT5G62630,AT5G63070,AT5G63230,AT5G63240,AT5G63250,AT5G63260,AT5G63300,AT5G63460,AT5G63480,AT5G63520,AT5G63550,AT5G63620,AT5G63690,AT5G63700,AT5G63730,AT5G63760,AT5G63810,AT5G63850,AT5G63920,AT5G63950,AT5G63960,AT5G64110,AT5G64420,AT5G64560,AT5G64580,AT5G64630,AT5G64640,AT5G64650,AT5G64730,AT5G64780,AT5G64980,AT5G64990,AT5G65020,AT5G65165,AT5G65220,AT5G65330,AT5G65370,AT5G65490,AT5G65510,AT5G65590,AT5G66020,AT5G66100,AT5G66110,AT5G66150,AT5G66230,AT5G66470,AT5G66530,AT5G66710,AT5G66750,AT5G66820,AT5G66880,AT5G67100,AT5G67120,AT5G67240,AT5G67270,AT5G67630 DAY_OST-ESS_DIFF OST-ESS generated from the list of differentiall expressed genes using p -value < 0.05. (Table S5 PubmedID:18923020) AT1G01430,AT1G01610,AT1G01830,AT1G02190,AT1G03310,AT1G03520,AT1G03590,AT1G03920,AT1G04580,AT1G05260,AT1G05280,AT1G05480,AT1G05590,AT1G06390,AT1G06420,AT1G06520,AT1G07090,AT1G07570,AT1G08800,AT1G09180,AT1G10020,AT1G10640,AT1G11130,AT1G11590,AT1G11970,AT1G12200,AT1G12330,AT1G12460,AT1G12820,AT1G13130,AT1G13900,AT1G16390,AT1G16705,AT1G16750,AT1G17200,AT1G17750,AT1G17800,AT1G18650,AT1G19830,AT1G19850,AT1G19940,AT1G20680,AT1G20730,AT1G21460,AT1G22160,AT1G22330,AT1G22460,AT1G23040,AT1G23980,AT1G24260,AT1G24470,AT1G25450,AT1G25510,AT1G26450,AT1G28240,AT1G28680,AT1G29050,AT1G31280,AT1G31290,AT1G32930,AT1G43580,AT1G43910,AT1G44790,AT1G47710,AT1G49800,AT1G51170,AT1G51340,AT1G51440,AT1G51500,AT1G52030,AT1G52290,AT1G52400,AT1G52470,AT1G53500,AT1G53770,AT1G54020,AT1G54510,AT1G55260,AT1G55270,AT1G56700,AT1G59900,AT1G60060,AT1G60940,AT1G61350,AT1G61800,AT1G62480,AT1G63290,AT1G63690,AT1G64130,AT1G65295,AT1G65590,AT1G65730,AT1G67040,AT1G69840,AT1G70710,AT1G70990,AT1G71050,AT1G72180,AT1G72240,AT1G72260,AT1G72810,AT1G72970,AT1G73080,AT1G73390,AT1G73600,AT1G73620,AT1G73700,AT1G73860,AT1G74160,AT1G74210,AT1G74260,AT1G74340,AT1G74430,AT1G74520,AT1G74940,AT1G75270,AT1G75390,AT1G75410,AT1G75580,AT1G75710,AT1G75750,AT1G76620,AT1G77610,AT1G77660,AT1G78170,AT1G78570,AT1G78610,AT1G78780,AT1G80050,AT1G80130,AT1G80520,AT1G80830,AT2G01630,AT2G01660,AT2G01850,AT2G02010,AT2G02780,AT2G11570,AT2G16500,AT2G16990,AT2G17760,AT2G18170,AT2G19580,AT2G19800,AT2G20900,AT2G21180,AT2G21380,AT2G22670,AT2G22680,AT2G22930,AT2G23130,AT2G23290,AT2G24220,AT2G24280,AT2G25530,AT2G25540,AT2G25990,AT2G26360,AT2G26440,AT2G26520,AT2G26910,AT2G27130,AT2G27880,AT2G27920,AT2G28120,AT2G28790,AT2G28870,AT2G28900,AT2G29050,AT2G29370,AT2G30010,AT2G30070,AT2G30080,AT2G30560,AT2G32790,AT2G34150,AT2G35310,AT2G35700,AT2G35840,AT2G37080,AT2G37300,AT2G38090,AT2G38170,AT2G39510,AT2G39710,AT2G39750,AT2G40250,AT2G40330,AT2G40600,AT2G40840,AT2G41940,AT2G42620,AT2G43530,AT2G44540,AT2G45110,AT2G45470,AT2G45970,AT2G46080,AT2G46225,AT2G46370,AT2G46960,AT2G47440,AT2G47460,AT2G48030,AT3G02140,AT3G02180,AT3G02310,AT3G02875,AT3G03450,AT3G03990,AT3G04270,AT3G04960,AT3G05400,AT3G06130,AT3G06220,AT3G06410,AT3G07720,AT3G07990,AT3G09690,AT3G09710,AT3G09870,AT3G10150,AT3G10190,AT3G10590,AT3G10910,AT3G10960,AT3G11600,AT3G11660,AT3G11690,AT3G12520,AT3G12760,AT3G13380,AT3G13540,AT3G13630,AT3G14720,AT3G14780,AT3G15350,AT3G15510,AT3G15605,AT3G16570,AT3G17150,AT3G17600,AT3G18490,AT3G20520,AT3G20940,AT3G21310,AT3G21500,AT3G21830,AT3G21840,AT3G21850,AT3G21860,AT3G23410,AT3G23750,AT3G24040,AT3G25140,AT3G25290,AT3G26800,AT3G27870,AT3G27960,AT3G28007,AT3G28050,AT3G28910,AT3G28960,AT3G29320,AT3G29810,AT3G30300,AT3G43720,AT3G44610,AT3G46860,AT3G47600,AT3G48460,AT3G50530,AT3G50660,AT3G51480,AT3G52840,AT3G53520,AT3G53690,AT3G53950,AT3G54140,AT3G54340,AT3G54820,AT3G56200,AT3G57270,AT3G58750,AT3G59310,AT3G59810,AT3G60070,AT3G60900,AT3G61250,AT3G61970,AT3G62630,AT4G01140,AT4G02300,AT4G02630,AT4G02670,AT4G03210,AT4G08430,AT4G08930,AT4G09960,AT4G10360,AT4G12890,AT4G12980,AT4G13950,AT4G15200,AT4G16130,AT4G17770,AT4G18390,AT4G18570,AT4G19380,AT4G19900,AT4G20800,AT4G21590,AT4G21620,AT4G22110,AT4G22400,AT4G24510,AT4G25640,AT4G25960,AT4G26480,AT4G26790,AT4G28330,AT4G29240,AT4G29570,AT4G29610,AT4G29620,AT4G29650,AT4G29680,AT4G30400,AT4G32390,AT4G32500,AT4G32970,AT4G34500,AT4G34590,AT4G34630,AT4G34990,AT4G35840,AT4G36380,AT4G36660,AT4G36920,AT4G37240,AT4G37470,AT4G37530,AT4G38050,AT4G38620,AT4G39210,AT4G39330,AT4G39350,AT4G39510,AT4G39840,AT4G40010,AT5G01090,AT5G01180,AT5G01200,AT5G01790,AT5G01800,AT5G02630,AT5G02800,AT5G03050,AT5G03140,AT5G03380,AT5G04530,AT5G04760,AT5G06190,AT5G06270,AT5G06960,AT5G07250,AT5G07990,AT5G08260,AT5G09670,AT5G09980,AT5G10930,AT5G11360,AT5G12170,AT5G12400,AT5G12450,AT5G13400,AT5G13670,AT5G15800,AT5G17010,AT5G17980,AT5G18290,AT5G19600,AT5G20500,AT5G20830,AT5G21105,AT5G22940,AT5G23210,AT5G23390,AT5G23400,AT5G23940,AT5G24420,AT5G25220,AT5G25610,AT5G26220,AT5G27380,AT5G35550,AT5G38970,AT5G39220,AT5G39260,AT5G40150,AT5G40230,AT5G40680,AT5G42090,AT5G42230,AT5G44360,AT5G45650,AT5G45670,AT5G47330,AT5G47530,AT5G47800,AT5G47870,AT5G48810,AT5G49050,AT5G49180,AT5G49320,AT5G50820,AT5G51750,AT5G51810,AT5G52950,AT5G54660,AT5G54850,AT5G55250,AT5G55930,AT5G55950,AT5G58120,AT5G58500,AT5G59320,AT5G59700,AT5G60130,AT5G60140,AT5G60710,AT5G60800,AT5G62150,AT5G62210,AT5G62740,AT5G63140,AT5G63410,AT5G63670,AT5G64410,AT5G64440,AT5G64510,AT5G64550,AT5G64870,AT5G64900,AT5G66350,AT5G66440,AT5G66940,AT5G67110,AT5G67200,AT5G67280,AT5G67360,AT5G67460 DAY_EP-ESS_DIFF EP-ESS generated from the list of differentiall expressed genes using p -value < 0.05. (Table S5 PubmedID:18923020) AT5G67270,AT5G67100,AT5G66820,AT5G66750,AT5G66710,AT5G66230,AT5G66150,AT5G65370,AT5G64990,AT5G64980,AT5G64650,AT5G64560,AT5G63960,AT5G63950,AT5G63920,AT5G63760,AT5G63730,AT5G63620,AT5G63480,AT5G62550,AT5G62500,AT5G62440,AT5G62410,AT5G61920,AT5G61770,AT5G61460,AT5G61440,AT5G61300,AT5G61000,AT5G60440,AT5G60150,AT5G60040,AT5G59870,AT5G59100,AT5G58830,AT5G58820,AT5G58600,AT5G58480,AT5G58370,AT5G58280,AT5G58190,AT5G58080,AT5G57740,AT5G57410,AT5G57000,AT5G56740,AT5G56590,AT5G56580,AT5G56370,AT5G56200,AT5G56000,AT5G55920,AT5G55360,AT5G55300,AT5G55280,AT5G55230,AT5G55080,AT5G54930,AT5G54530,AT5G54350,AT5G53620,AT5G53520,AT5G52910,AT5G52480,AT5G52330,AT5G52220,AT5G51600,AT5G50740,AT5G50730,AT5G50470,AT5G49410,AT5G49310,AT5G48960,AT5G48870,AT5G48760,AT5G48750,AT5G48650,AT5G48600,AT5G48120,AT5G47410,AT5G46740,AT5G46280,AT5G44830,AT5G43530,AT5G43500,AT5G43080,AT5G42700,AT5G42330,AT5G41880,AT5G41850,AT5G41640,AT5G41250,AT5G40930,AT5G40430,AT5G40360,AT5G40040,AT5G39700,AT5G39560,AT5G39440,AT5G39350,AT5G38960,AT5G38890,AT5G38360,AT5G38170,AT5G38110,AT5G37630,AT5G37520,AT5G37010,AT5G35560,AT5G34940,AT5G27430,AT5G27330,AT5G27000,AT5G26630,AT5G25950,AT5G25470,AT5G24510,AT5G24440,AT5G24330,AT5G23910,AT5G23430,AT5G23290,AT5G22980,AT5G22650,AT5G20930,AT5G20160,AT5G19180,AT5G18620,AT5G17800,AT5G17470,AT5G17320,AT5G17160,AT5G17100,AT5G17070,AT5G16850,AT5G16690,AT5G16310,AT5G16250,AT5G16130,AT5G15610,AT5G15520,AT5G15070,AT5G14960,AT5G14640,AT5G14250,AT5G13960,AT5G13840,AT5G13830,AT5G13600,AT5G12980,AT5G12930,AT5G12460,AT5G12220,AT5G12060,AT5G11780,AT5G11530,AT5G11510,AT5G11460,AT5G11300,AT5G11220,AT5G11030,AT5G10510,AT5G10220,AT5G09490,AT5G09370,AT5G09360,AT5G08620,AT5G08450,AT5G08020,AT5G07880,AT5G07850,AT5G07810,AT5G07400,AT5G07280,AT5G07260,AT5G07210,AT5G07160,AT5G07090,AT5G07060,AT5G06920,AT5G06910,AT5G06110,AT5G06020,AT5G05990,AT5G05940,AT5G05510,AT5G05260,AT5G05180,AT5G05130,AT5G05030,AT5G04660,AT5G04620,AT5G04610,AT5G03930,AT5G03870,AT5G03810,AT5G03780,AT5G03740,AT5G03200,AT5G02610,AT5G02590,AT5G02470,AT5G02370,AT5G02220,AT5G01910,AT5G01650,AT4G40000,AT4G39860,AT4G39680,AT4G39630,AT4G39530,AT4G39000,AT4G38180,AT4G38000,AT4G37740,AT4G37490,AT4G37360,AT4G37210,AT4G37110,AT4G36590,AT4G36290,AT4G35730,AT4G34670,AT4G33400,AT4G33330,AT4G33270,AT4G33220,AT4G32080,AT4G31900,AT4G31840,AT4G31700,AT4G31120,AT4G30870,AT4G30800,AT4G30590,AT4G29550,AT4G29410,AT4G29360,AT4G29170,AT4G28990,AT4G28820,AT4G27890,AT4G27690,AT4G27660,AT4G27510,AT4G27010,AT4G26870,AT4G26760,AT4G26660,AT4G26430,AT4G25530,AT4G25340,AT4G24790,AT4G24710,AT4G23800,AT4G23750,AT4G23110,AT4G22970,AT4G22280,AT4G21820,AT4G21800,AT4G21430,AT4G21270,AT4G21080,AT4G19150,AT4G19130,AT4G18870,AT4G17760,AT4G17720,AT4G17505,AT4G17240,AT4G16800,AT4G15890,AT4G15830,AT4G15040,AT4G14930,AT4G14780,AT4G14330,AT4G13780,AT4G13380,AT4G12740,AT4G12540,AT4G12140,AT4G11790,AT4G11560,AT4G11510,AT4G11400,AT4G11080,AT4G10640,AT4G10490,AT4G10220,AT4G09340,AT4G05470,AT4G05190,AT4G03120,AT4G03100,AT4G02390,AT4G02230,AT4G02220,AT4G02150,AT4G01730,AT4G01500,AT4G00370,AT4G00240,AT3G66656,AT3G63480,AT3G63250,AT3G63130,AT3G62940,AT3G62870,AT3G61780,AT3G61670,AT3G61640,AT3G61100,AT3G61090,AT3G60840,AT3G60770,AT3G60140,AT3G60010,AT3G59790,AT3G59630,AT3G59610,AT3G59550,AT3G58650,AT3G58470,AT3G57360,AT3G57060,AT3G56900,AT3G56520,AT3G56100,AT3G55660,AT3G55460,AT3G55280,AT3G55170,AT3G55160,AT3G55060,AT3G55010,AT3G54670,AT3G54630,AT3G54560,AT3G54490,AT3G53440,AT3G53380,AT3G53020,AT3G52950,AT3G52870,AT3G52550,AT3G51740,AT3G51290,AT3G51280,AT3G50720,AT3G50520,AT3G50070,AT3G48950,AT3G48910,AT3G48540,AT3G48425,AT3G48210,AT3G45950,AT3G45110,AT3G44750,AT3G42830,AT3G42660,AT3G29160,AT3G28670,AT3G28230,AT3G27785,AT3G27640,AT3G27530,AT3G27360,AT3G26744,AT3G26420,AT3G26010,AT3G25750,AT3G25420,AT3G25280,AT3G25080,AT3G24790,AT3G24780,AT3G24510,AT3G24495,AT3G24440,AT3G24320,AT3G24280,AT3G24270,AT3G24060,AT3G23890,AT3G23670,AT3G23390,AT3G23060,AT3G22880,AT3G22520,AT3G21640,AT3G21620,AT3G21410,AT3G21170,AT3G20740,AT3G20670,AT3G20620,AT3G20560,AT3G20330,AT3G20260,AT3G20150,AT3G20030,AT3G20020,AT3G19720,AT3G19350,AT3G18880,AT3G18760,AT3G18610,AT3G18035,AT3G17230,AT3G17160,AT3G16730,AT3G16650,AT3G16320,AT3G16310,AT3G15560,AT3G15000,AT3G14890,AT3G14480,AT3G14205,AT3G13830,AT3G13640,AT3G13620,AT3G13450,AT3G13370,AT3G13000,AT3G12530,AT3G12380,AT3G12370,AT3G12270,AT3G12180,AT3G11740,AT3G11520,AT3G10880,AT3G10780,AT3G10610,AT3G10310,AT3G09730,AT3G09480,AT3G09350,AT3G09140,AT3G09080,AT3G08810,AT3G06680,AT3G06660,AT3G06030,AT3G06010,AT3G05760,AT3G05460,AT3G05330,AT3G05130,AT3G05060,AT3G04780,AT3G04710,AT3G04660,AT3G04260,AT3G03970,AT3G03410,AT3G03260,AT3G03230,AT3G03130,AT3G03110,AT3G02920,AT3G02820,AT3G02760,AT3G02640,AT3G02560,AT3G02520,AT3G02220,AT3G01410,AT3G01070,AT2G47920,AT2G47780,AT2G47640,AT2G47610,AT2G45490,AT2G44690,AT2G44450,AT2G44240,AT2G43670,AT2G43660,AT2G43640,AT2G42110,AT2G42090,AT2G41500,AT2G40780,AT2G40580,AT2G40360,AT2G39910,AT2G39880,AT2G39810,AT2G39640,AT2G39460,AT2G39090,AT2G38810,AT2G38730,AT2G38720,AT2G38620,AT2G38220,AT2G38160,AT2G37880,AT2G37600,AT2G37560,AT2G37470,AT2G37070,AT2G36560,AT2G36200,AT2G35880,AT2G35670,AT2G34990,AT2G34880,AT2G34670,AT2G34210,AT2G34190,AT2G34040,AT2G33640,AT2G33620,AT2G32980,AT2G32590,AT2G32440,AT2G32370,AT2G31780,AT2G31760,AT2G31010,AT2G30730,AT2G30590,AT2G30260,AT2G29570,AT2G29540,AT2G28620,AT2G28030,AT2G27970,AT2G27610,AT2G27120,AT2G26710,AT2G26320,AT2G26180,AT2G26070,AT2G26050,AT2G25700,AT2G25060,AT2G24810,AT2G24740,AT2G23990,AT2G23970,AT2G23750,AT2G23580,AT2G22610,AT2G22400,AT2G21790,AT2G20390,AT2G20290,AT2G20170,AT2G18880,AT2G18720,AT2G18520,AT2G17900,AT2G17750,AT2G17620,AT2G17560,AT2G17410,AT2G17350,AT2G17310,AT2G17120,AT2G16960,AT2G16780,AT2G16440,AT2G16270,AT2G15740,AT2G14660,AT2G14540,AT2G07690,AT2G05120,AT2G04750,AT2G03770,AT2G03670,AT2G03190,AT2G03070,AT2G01810,AT1G80530,AT1G80330,AT1G80210,AT1G79950,AT1G78770,AT1G78710,AT1G78650,AT1G78220,AT1G77780,AT1G77720,AT1G77550,AT1G77510,AT1G77470,AT1G77390,AT1G76870,AT1G76740,AT1G76550,AT1G76405,AT1G76290,AT1G75150,AT1G74600,AT1G73820,AT1G73610,AT1G73560,AT1G73240,AT1G72670,AT1G72580,AT1G72440,AT1G72270,AT1G71890,AT1G71770,AT1G71760,AT1G69770,AT1G69760,AT1G69630,AT1G69400,AT1G69250,AT1G69210,AT1G69190,AT1G68510,AT1G68470,AT1G68160,AT1G67820,AT1G67680,AT1G67630,AT1G67320,AT1G67220,AT1G66740,AT1G66620,AT1G66250,AT1G66070,AT1G66030,AT1G65990,AT1G65330,AT1G65240,AT1G64600,AT1G64290,AT1G63660,AT1G63640,AT1G63190,AT1G63160,AT1G63100,AT1G61320,AT1G60080,AT1G59800,AT1G59670,AT1G59540,AT1G56170,AT1G56110,AT1G55900,AT1G55820,AT1G55810,AT1G55550,AT1G55150,AT1G54115,AT1G53140,AT1G51960,AT1G51710,AT1G51290,AT1G51210,AT1G51040,AT1G50490,AT1G50240,AT1G49910,AT1G49540,AT1G49480,AT1G49190,AT1G48910,AT1G48160,AT1G44900,AT1G44110,AT1G44090,AT1G43900,AT1G42980,AT1G41880,AT1G36340,AT1G35530,AT1G35183,AT1G34770,AT1G34650,AT1G34210,AT1G34180,AT1G33040,AT1G32190,AT1G31860,AT1G31530,AT1G31250,AT1G30710,AT1G30690,AT1G30480,AT1G30460,AT1G30070,AT1G29080,AT1G28300,AT1G27880,AT1G27680,AT1G27400,AT1G26330,AT1G25540,AT1G25260,AT1G24310,AT1G24240,AT1G24090,AT1G23320,AT1G23180,AT1G22780,AT1G22660,AT1G21970,AT1G21670,AT1G20940,AT1G20930,AT1G20720,AT1G19950,AT1G19340,AT1G19320,AT1G19080,AT1G18540,AT1G18450,AT1G18370,AT1G18350,AT1G17960,AT1G16980,AT1G16640,AT1G16500,AT1G16330,AT1G16290,AT1G16070,AT1G15790,AT1G15660,AT1G15480,AT1G15310,AT1G14687,AT1G14610,AT1G14580,AT1G14410,AT1G14260,AT1G13690,AT1G13680,AT1G13330,AT1G12370,AT1G12270,AT1G12190,AT1G11070,AT1G10780,AT1G10230,AT1G10010,AT1G09930,AT1G09830,AT1G09760,AT1G09660,AT1G09640,AT1G09510,AT1G09470,AT1G09320,AT1G08880,AT1G08860,AT1G08560,AT1G07840,AT1G07790,AT1G07690,AT1G07650,AT1G07370,AT1G06590,AT1G05460,AT1G05440,AT1G05370,AT1G05350,AT1G05180,AT1G05160,AT1G04880,AT1G04730,AT1G04645,AT1G04590,AT1G04380,AT1G04190,AT1G04070,AT1G04030,AT1G03980,AT1G03830,AT1G03780,AT1G03687,AT1G03445,AT1G03360,AT1G03300,AT1G03280,AT1G03180,AT1G02940,AT1G02840,AT1G02690,AT1G01930,AT1G01840,AT1G01370 DAY_M_G1-S_DIFF Early seed specific endosperm preffered transcripts with putative M or G1-S phase specific expression (Table S8 PubmedID:18923020) AT2G04750,AT1G08560,AT3G01070,AT1G03445,AT5G37010,AT4G27510,AT2G37880,AT2G25060,AT3G16320,AT2G17620,AT2G42110,AT2G07690,AT3G02920,AT5G62550,AT5G37630,AT3G53380,AT2G16780,AT4G15830,AT1G34770,AT3G11520,AT5G18620,AT4G17760,AT1G67320,AT1G03780,AT3G56100,AT1G16070,AT3G16730,AT4G15890,AT1G04730,AT5G62410,AT5G41880,AT5G66230,AT5G60040,AT1G09930,AT5G67100,AT3G16310,AT3G59550,AT3G09730,AT3G02820,AT1G20720,AT5G63920,AT5G16690,AT5G02220,AT5G52910,AT5G38110,AT5G15610,AT3G12530,AT1G44900,AT3G48540,AT1G14260,AT1G26330,AT5G63960,AT4G03120,AT1G22660,AT2G21790,AT2G37560,AT2G25540 DAY_ESS_DIFF Differentially expressed genes using a p-value < 0.05 which are early seed specific (ESS) in the GHL Data. (Table S2 PubmedID:18923020) AT1G01100,AT1G01370,AT1G01420,AT1G01430,AT1G01610,AT1G01660,AT1G01710,AT1G01730,AT1G01830,AT1G01840,AT1G01930,AT1G01940,AT1G02110,AT1G02190,AT1G02260,AT1G02690,AT1G02840,AT1G02940,AT1G03110,AT1G03180,AT1G03190,AT1G03280,AT1G03290,AT1G03300,AT1G03310,AT1G03360,AT1G03445,AT1G03520,AT1G03590,AT1G03687,AT1G03710,AT1G03780,AT1G03830,AT1G03920,AT1G03980,AT1G04000,AT1G04020,AT1G04030,AT1G04050,AT1G04070,AT1G04130,AT1G04190,AT1G04290,AT1G04380,AT1G04580,AT1G04590,AT1G04645,AT1G04730,AT1G04810,AT1G04850,AT1G04880,AT1G04900,AT1G05055,AT1G05160,AT1G05180,AT1G05230,AT1G05260,AT1G05280,AT1G05350,AT1G05370,AT1G05440,AT1G05460,AT1G05480,AT1G05590,AT1G05940,AT1G05950,AT1G06150,AT1G06220,AT1G06270,AT1G06390,AT1G06420,AT1G06450,AT1G06520,AT1G06550,AT1G06590,AT1G06670,AT1G06730,AT1G06760,AT1G06790,AT1G06960,AT1G07090,AT1G07250,AT1G07360,AT1G07370,AT1G07570,AT1G07650,AT1G07690,AT1G07750,AT1G07790,AT1G07810,AT1G07840,AT1G07960,AT1G07970,AT1G08130,AT1G08560,AT1G08580,AT1G08700,AT1G08750,AT1G08800,AT1G08860,AT1G08880,AT1G09155,AT1G09160,AT1G09180,AT1G09190,AT1G09200,AT1G09280,AT1G09320,AT1G09450,AT1G09470,AT1G09510,AT1G09640,AT1G09660,AT1G09760,AT1G09770,AT1G09790,AT1G09830,AT1G09930,AT1G10010,AT1G10020,AT1G10230,AT1G10270,AT1G10290,AT1G10640,AT1G10760,AT1G10780,AT1G11070,AT1G11100,AT1G11130,AT1G11590,AT1G11900,AT1G11940,AT1G11970,AT1G12190,AT1G12200,AT1G12270,AT1G12330,AT1G12370,AT1G12460,AT1G12770,AT1G12820,AT1G12830,AT1G12910,AT1G12930,AT1G13030,AT1G13130,AT1G13330,AT1G13370,AT1G13680,AT1G13690,AT1G13710,AT1G13870,AT1G13900,AT1G13980,AT1G14260,AT1G14410,AT1G14580,AT1G14610,AT1G14687,AT1G15220,AT1G15310,AT1G15410,AT1G15480,AT1G15660,AT1G15790,AT1G15930,AT1G16070,AT1G16220,AT1G16290,AT1G16330,AT1G16390,AT1G16430,AT1G16480,AT1G16500,AT1G16520,AT1G16640,AT1G16705,AT1G16750,AT1G16780,AT1G16900,AT1G16980,AT1G17040,AT1G17200,AT1G17750,AT1G17760,AT1G17800,AT1G17960,AT1G18040,AT1G18100,AT1G18350,AT1G18370,AT1G18450,AT1G18490,AT1G18540,AT1G18560,AT1G18600,AT1G18620,AT1G18640,AT1G18650,AT1G18680,AT1G19080,AT1G19240,AT1G19320,AT1G19330,AT1G19340,AT1G19430,AT1G19525,AT1G19640,AT1G19830,AT1G19850,AT1G19860,AT1G19870,AT1G19940,AT1G19950,AT1G20030,AT1G20090,AT1G20410,AT1G20430,AT1G20540,AT1G20580,AT1G20680,AT1G20696,AT1G20720,AT1G20730,AT1G20930,AT1G20940,AT1G21060,AT1G21190,AT1G21460,AT1G21560,AT1G21670,AT1G21690,AT1G21700,AT1G21810,AT1G21880,AT1G21970,AT1G22140,AT1G22160,AT1G22240,AT1G22330,AT1G22460,AT1G22660,AT1G22780,AT1G22870,AT1G22920,AT1G22970,AT1G23040,AT1G23180,AT1G23320,AT1G23420,AT1G23880,AT1G23980,AT1G24030,AT1G24090,AT1G24240,AT1G24260,AT1G24290,AT1G24310,AT1G24470,AT1G24540,AT1G24650,AT1G25260,AT1G25450,AT1G25460,AT1G25510,AT1G25540,AT1G26300,AT1G26330,AT1G26450,AT1G26470,AT1G26500,AT1G26540,AT1G26580,AT1G26600,AT1G26690,AT1G26760,AT1G26880,AT1G26930,AT1G26940,AT1G27080,AT1G27400,AT1G27435,AT1G27520,AT1G27550,AT1G27680,AT1G27880,AT1G28060,AT1G28170,AT1G28240,AT1G28300,AT1G28340,AT1G28680,AT1G29040,AT1G29050,AT1G29080,AT1G29110,AT1G29310,AT1G29660,AT1G29850,AT1G29880,AT1G30070,AT1G30160,AT1G30460,AT1G30480,AT1G30490,AT1G30530,AT1G30690,AT1G30710,AT1G30740,AT1G30825,AT1G30960,AT1G31250,AT1G31280,AT1G31290,AT1G31310,AT1G31360,AT1G31410,AT1G31530,AT1G31860,AT1G31870,AT1G32190,AT1G32580,AT1G32900,AT1G32930,AT1G33040,AT1G33400,AT1G33410,AT1G33420,AT1G34040,AT1G34150,AT1G34170,AT1G34180,AT1G34210,AT1G34355,AT1G34470,AT1G34640,AT1G34650,AT1G34770,AT1G35183,AT1G35530,AT1G35780,AT1G36340,AT1G41880,AT1G42480,AT1G42980,AT1G43580,AT1G43620,AT1G43900,AT1G43910,AT1G44090,AT1G44110,AT1G44750,AT1G44790,AT1G44900,AT1G45000,AT1G45160,AT1G45170,AT1G45190,AT1G47200,AT1G47250,AT1G47330,AT1G47570,AT1G47710,AT1G47720,AT1G47810,AT1G47870,AT1G48140,AT1G48160,AT1G48270,AT1G48460,AT1G48760,AT1G48870,AT1G48910,AT1G49170,AT1G49190,AT1G49450,AT1G49480,AT1G49540,AT1G49800,AT1G49860,AT1G49880,AT1G49910,AT1G49950,AT1G50040,AT1G50240,AT1G50300,AT1G50490,AT1G50620,AT1G50940,AT1G51000,AT1G51040,AT1G51060,AT1G51170,AT1G51210,AT1G51290,AT1G51340,AT1G51440,AT1G51460,AT1G51500,AT1G51510,AT1G51570,AT1G51710,AT1G51960,AT1G52030,AT1G52290,AT1G52300,AT1G52310,AT1G52400,AT1G52410,AT1G52470,AT1G53140,AT1G53460,AT1G53500,AT1G53770,AT1G53900,AT1G54020,AT1G54115,AT1G54140,AT1G54150,AT1G54160,AT1G54250,AT1G54410,AT1G54510,AT1G54610,AT1G54690,AT1G54830,AT1G54850,AT1G55150,AT1G55260,AT1G55270,AT1G55510,AT1G55540,AT1G55550,AT1G55630,AT1G55810,AT1G55820,AT1G55900,AT1G55910,AT1G55930,AT1G56080,AT1G56110,AT1G56170,AT1G56210,AT1G56290,AT1G56350,AT1G56440,AT1G56700,AT1G57540,AT1G57680,AT1G57780,AT1G57820,AT1G59540,AT1G59670,AT1G59800,AT1G59860,AT1G59900,AT1G60060,AT1G60080,AT1G60490,AT1G60860,AT1G60930,AT1G60940,AT1G61000,AT1G61010,AT1G61320,AT1G61350,AT1G61670,AT1G61720,AT1G61800,AT1G61900,AT1G62020,AT1G62030,AT1G62050,AT1G62130,AT1G62330,AT1G62480,AT1G62950,AT1G62990,AT1G63020,AT1G63090,AT1G63100,AT1G63160,AT1G63190,AT1G63290,AT1G63430,AT1G63640,AT1G63650,AT1G63660,AT1G63690,AT1G63950,AT1G64130,AT1G64290,AT1G64600,AT1G64970,AT1G65020,AT1G65240,AT1G65295,AT1G65330,AT1G65410,AT1G65590,AT1G65650,AT1G65700,AT1G65730,AT1G65990,AT1G66030,AT1G66070,AT1G66250,AT1G66540,AT1G66620,AT1G66740,AT1G66750,AT1G67040,AT1G67140,AT1G67180,AT1G67220,AT1G67250,AT1G67320,AT1G67630,AT1G67680,AT1G67820,AT1G67850,AT1G68050,AT1G68100,AT1G68160,AT1G68290,AT1G68470,AT1G68510,AT1G68720,AT1G68820,AT1G68980,AT1G69190,AT1G69210,AT1G69250,AT1G69400,AT1G69420,AT1G69630,AT1G69760,AT1G69770,AT1G69820,AT1G69840,AT1G69860,AT1G70280,AT1G70710,AT1G70990,AT1G71040,AT1G71050,AT1G71120,AT1G71180,AT1G71220,AT1G71230,AT1G71250,AT1G71310,AT1G71490,AT1G71750,AT1G71760,AT1G71770,AT1G71830,AT1G71870,AT1G71890,AT1G72050,AT1G72180,AT1G72240,AT1G72250,AT1G72260,AT1G72270,AT1G72440,AT1G72530,AT1G72550,AT1G72580,AT1G72670,AT1G72810,AT1G72970,AT1G73080,AT1G73200,AT1G73240,AT1G73390,AT1G73460,AT1G73560,AT1G73600,AT1G73610,AT1G73620,AT1G73700,AT1G73820,AT1G73860,AT1G73930,AT1G74160,AT1G74210,AT1G74260,AT1G74340,AT1G74390,AT1G74430,AT1G74490,AT1G74520,AT1G74600,AT1G74940,AT1G75010,AT1G75150,AT1G75170,AT1G75270,AT1G75390,AT1G75410,AT1G75430,AT1G75510,AT1G75580,AT1G75670,AT1G75710,AT1G75750,AT1G75990,AT1G76070,AT1G76260,AT1G76280,AT1G76290,AT1G76300,AT1G76310,AT1G76340,AT1G76400,AT1G76405,AT1G76420,AT1G76500,AT1G76510,AT1G76550,AT1G76620,AT1G76740,AT1G76870,AT1G76890,AT1G77360,AT1G77390,AT1G77470,AT1G77480,AT1G77510,AT1G77550,AT1G77610,AT1G77630,AT1G77660,AT1G77720,AT1G77780,AT1G78150,AT1G78170,AT1G78210,AT1G78220,AT1G78570,AT1G78610,AT1G78650,AT1G78710,AT1G78770,AT1G78780,AT1G78790,AT1G78870,AT1G78940,AT1G79050,AT1G79070,AT1G79080,AT1G79220,AT1G79840,AT1G79890,AT1G79950,AT1G79990,AT1G80050,AT1G80130,AT1G80190,AT1G80210,AT1G80270,AT1G80330,AT1G80370,AT1G80520,AT1G80530,AT1G80670,AT1G80830,AT1G80850,AT2G01070,AT2G01090,AT2G01100,AT2G01120,AT2G01270,AT2G01630,AT2G01640,AT2G01660,AT2G01750,AT2G01810,AT2G01820,AT2G01850,AT2G02010,AT2G02080,AT2G02150,AT2G02490,AT2G02570,AT2G02730,AT2G02780,AT2G02970,AT2G03070,AT2G03190,AT2G03280,AT2G03430,AT2G03510,AT2G03670,AT2G03770,AT2G03800,AT2G03810,AT2G03870,AT2G03980,AT2G04340,AT2G04350,AT2G04660,AT2G04750,AT2G04920,AT2G05120,AT2G05760,AT2G05830,AT2G07340,AT2G07690,AT2G10950,AT2G11570,AT2G11890,AT2G13100,AT2G13290,AT2G13370,AT2G13540,AT2G13840,AT2G14170,AT2G14540,AT2G14660,AT2G14690,AT2G15220,AT2G15270,AT2G15400,AT2G15740,AT2G15930,AT2G16270,AT2G16400,AT2G16440,AT2G16500,AT2G16780,AT2G16960,AT2G16990,AT2G17020,AT2G17120,AT2G17270,AT2G17300,AT2G17310,AT2G17350,AT2G17410,AT2G17560,AT2G17620,AT2G17650,AT2G17670,AT2G17750,AT2G17760,AT2G17870,AT2G17900,AT2G18100,AT2G18170,AT2G18245,AT2G18400,AT2G18510,AT2G18520,AT2G18600,AT2G18650,AT2G18720,AT2G18730,AT2G18740,AT2G18880,AT2G19110,AT2G19340,AT2G19430,AT2G19470,AT2G19500,AT2G19580,AT2G19800,AT2G19830,AT2G20170,AT2G20210,AT2G20290,AT2G20390,AT2G20480,AT2G20530,AT2G20690,AT2G20710,AT2G20820,AT2G20900,AT2G21060,AT2G21070,AT2G21180,AT2G21380,AT2G21390,AT2G21450,AT2G21600,AT2G21630,AT2G21710,AT2G21790,AT2G21800,AT2G22400,AT2G22420,AT2G22480,AT2G22530,AT2G22610,AT2G22620,AT2G22670,AT2G22680,AT2G22920,AT2G22930,AT2G23130,AT2G23180,AT2G23290,AT2G23460,AT2G23530,AT2G23550,AT2G23570,AT2G23580,AT2G23750,AT2G23930,AT2G23970,AT2G23990,AT2G24170,AT2G24220,AT2G24280,AT2G24310,AT2G24440,AT2G24490,AT2G24590,AT2G24740,AT2G24810,AT2G24820,AT2G25060,AT2G25110,AT2G25140,AT2G25190,AT2G25210,AT2G25355,AT2G25530,AT2G25590,AT2G25630,AT2G25670,AT2G25700,AT2G25740,AT2G25920,AT2G25990,AT2G26050,AT2G26070,AT2G26180,AT2G26200,AT2G26320,AT2G26360,AT2G26440,AT2G26520,AT2G26600,AT2G26680,AT2G26710,AT2G26870,AT2G26910,AT2G27120,AT2G27130,AT2G27260,AT2G27390,AT2G27450,AT2G27460,AT2G27590,AT2G27610,AT2G27720,AT2G27820,AT2G27880,AT2G27920,AT2G27970,AT2G28030,AT2G28060,AT2G28120,AT2G28130,AT2G28620,AT2G28790,AT2G28870,AT2G28900,AT2G29040,AT2G29050,AT2G29370,AT2G29540,AT2G29570,AT2G29690,AT2G29900,AT2G29920,AT2G30000,AT2G30010,AT2G30070,AT2G30080,AT2G30260,AT2G30280,AT2G30320,AT2G30330,AT2G30410,AT2G30560,AT2G30590,AT2G30730,AT2G30810,AT2G30920,AT2G31010,AT2G31190,AT2G31290,AT2G31740,AT2G31760,AT2G31780,AT2G32030,AT2G32070,AT2G32340,AT2G32370,AT2G32410,AT2G32440,AT2G32590,AT2G32600,AT2G32630,AT2G32700,AT2G32720,AT2G32790,AT2G32920,AT2G32980,AT2G33610,AT2G33620,AT2G33640,AT2G33700,AT2G33730,AT2G34040,AT2G34150,AT2G34190,AT2G34210,AT2G34260,AT2G34555,AT2G34670,AT2G34750,AT2G34840,AT2G34880,AT2G34990,AT2G35010,AT2G35100,AT2G35310,AT2G35430,AT2G35530,AT2G35610,AT2G35620,AT2G35630,AT2G35670,AT2G35700,AT2G35840,AT2G35870,AT2G35880,AT2G36010,AT2G36130,AT2G36190,AT2G36200,AT2G36230,AT2G36300,AT2G36390,AT2G36560,AT2G36720,AT2G37070,AT2G37080,AT2G37160,AT2G37300,AT2G37320,AT2G37420,AT2G37470,AT2G37500,AT2G37510,AT2G37540,AT2G37560,AT2G37585,AT2G37600,AT2G37720,AT2G37880,AT2G38090,AT2G38160,AT2G38170,AT2G38220,AT2G38490,AT2G38580,AT2G38620,AT2G38660,AT2G38680,AT2G38720,AT2G38730,AT2G38810,AT2G39090,AT2G39120,AT2G39290,AT2G39340,AT2G39460,AT2G39510,AT2G39640,AT2G39710,AT2G39750,AT2G39760,AT2G39810,AT2G39870,AT2G39880,AT2G39910,AT2G39960,AT2G40060,AT2G40250,AT2G40330,AT2G40360,AT2G40550,AT2G40580,AT2G40600,AT2G40660,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AT3G54490,AT3G54560,AT3G54610,AT3G54630,AT3G54670,AT3G54750,AT3G54820,AT3G54980,AT3G55000,AT3G55005,AT3G55010,AT3G55060,AT3G55160,AT3G55170,AT3G55280,AT3G55390,AT3G55460,AT3G55660,AT3G55850,AT3G55920,AT3G56100,AT3G56120,AT3G56200,AT3G56250,AT3G56300,AT3G56370,AT3G56520,AT3G56900,AT3G56990,AT3G57000,AT3G57060,AT3G57070,AT3G57150,AT3G57250,AT3G57270,AT3G57300,AT3G57360,AT3G57610,AT3G57785,AT3G57840,AT3G57870,AT3G57990,AT3G58470,AT3G58530,AT3G58570,AT3G58600,AT3G58650,AT3G58750,AT3G58780,AT3G59000,AT3G59310,AT3G59390,AT3G59410,AT3G59420,AT3G59430,AT3G59480,AT3G59550,AT3G59610,AT3G59630,AT3G59660,AT3G59790,AT3G59810,AT3G60010,AT3G60070,AT3G60140,AT3G60770,AT3G60830,AT3G60840,AT3G60880,AT3G60900,AT3G61090,AT3G61100,AT3G61140,AT3G61230,AT3G61250,AT3G61310,AT3G61620,AT3G61640,AT3G61670,AT3G61780,AT3G61860,AT3G61970,AT3G62050,AT3G62060,AT3G62220,AT3G62240,AT3G62390,AT3G62450,AT3G62630,AT3G62840,AT3G62870,AT3G62940,AT3G63090,AT3G63130,AT3G63250,AT3G63390,AT3G63420,AT3G63460,AT3G63480,AT3G66656,AT3G66658,AT4G00240,AT4G00370,AT4G00820,AT4G00830,AT4G01140,AT4G01500,AT4G01510,AT4G01570,AT4G01730,AT4G01880,AT4G01990,AT4G02020,AT4G02030,AT4G02060,AT4G02150,AT4G02220,AT4G02230,AT4G02300,AT4G02390,AT4G02630,AT4G02670,AT4G02750,AT4G02780,AT4G02800,AT4G02820,AT4G02980,AT4G03090,AT4G03100,AT4G03120,AT4G03210,AT4G04700,AT4G04790,AT4G04920,AT4G04950,AT4G04955,AT4G05190,AT4G05400,AT4G05450,AT4G05470,AT4G05520,AT4G07390,AT4G07950,AT4G08350,AT4G08430,AT4G08930,AT4G09020,AT4G09080,AT4G09140,AT4G09340,AT4G09510,AT4G09820,AT4G09960,AT4G10090,AT4G10210,AT4G10220,AT4G10280,AT4G10360,AT4G10490,AT4G10610,AT4G10620,AT4G10640,AT4G10760,AT4G10925,AT4G11080,AT4G11100,AT4G11130,AT4G11160,AT4G11400,AT4G11510,AT4G11560,AT4G11790,AT4G11840,AT4G11940,AT4G12140,AT4G12230,AT4G12540,AT4G12570,AT4G12740,AT4G12790,AT4G12890,AT4G12980,AT4G13020,AT4G13270,AT4G13380,AT4G13640,AT4G13780,AT4G13950,AT4G14140,AT4G14180,AT4G14320,AT4G14330,AT4G14730,AT4G14780,AT4G14800,AT4G14930,AT4G15040,AT4G15200,AT4G15420,AT4G15820,AT4G15830,AT4G15890,AT4G16120,AT4G16130,AT4G16170,AT4G16340,AT4G16420,AT4G16600,AT4G16610,AT4G16710,AT4G16745,AT4G16800,AT4G17070,AT4G17180,AT4G17240,AT4G17480,AT4G17505,AT4G17660,AT4G17720,AT4G17760,AT4G17770,AT4G17830,AT4G17960,AT4G18060,AT4G18300,AT4G18390,AT4G18570,AT4G18580,AT4G18870,AT4G19130,AT4G19150,AT4G19220,AT4G19350,AT4G19380,AT4G19400,AT4G19650,AT4G19900,AT4G20280,AT4G20410,AT4G20440,AT4G20800,AT4G20910,AT4G21080,AT4G21090,AT4G21150,AT4G21180,AT4G21270,AT4G21430,AT4G21590,AT4G21620,AT4G21800,AT4G21820,AT4G21910,AT4G22000,AT4G22110,AT4G22150,AT4G22280,AT4G22350,AT4G22400,AT4G22600,AT4G22740,AT4G22860,AT4G22970,AT4G23040,AT4G23080,AT4G23100,AT4G23110,AT4G23750,AT4G23800,AT4G23930,AT4G23960,AT4G24210,AT4G24260,AT4G24470,AT4G24510,AT4G24580,AT4G24610,AT4G24710,AT4G24790,AT4G24940,AT4G25020,AT4G25210,AT4G25320,AT4G25340,AT4G25530,AT4G25640,AT4G25720,AT4G25740,AT4G25800,AT4G25960,AT4G26100,AT4G26230,AT4G26300,AT4G26430,AT4G26480,AT4G26660,AT4G26760,AT4G26790,AT4G26820,AT4G26870,AT4G27010,AT4G27040,AT4G27050,AT4G27060,AT4G27120,AT4G27180,AT4G27240,AT4G27490,AT4G27510,AT4G27660,AT4G27690,AT4G27750,AT4G27890,AT4G27980,AT4G28180,AT4G28190,AT4G28310,AT4G28330,AT4G28820,AT4G28990,AT4G29040,AT4G29130,AT4G29140,AT4G29170,AT4G29240,AT4G29360,AT4G29410,AT4G29510,AT4G29550,AT4G29570,AT4G29580,AT4G29610,AT4G29620,AT4G29650,AT4G29680,AT4G29770,AT4G29870,AT4G30110,AT4G30220,AT4G30400,AT4G30590,AT4G30760,AT4G30800,AT4G30840,AT4G30860,AT4G30870,AT4G30890,AT4G31010,AT4G31120,AT4G31200,AT4G31400,AT4G31700,AT4G31760,AT4G31770,AT4G31840,AT4G31880,AT4G31900,AT4G32080,AT4G32140,AT4G32240,AT4G32350,AT4G32390,AT4G32500,AT4G32520,AT4G32730,AT4G32830,AT4G32910,AT4G32930,AT4G32970,AT4G33180,AT4G33220,AT4G33270,AT4G33330,AT4G33400,AT4G33830,AT4G33865,AT4G33910,AT4G34040,AT4G34140,AT4G34265,AT4G34270,AT4G34340,AT4G34500,AT4G34590,AT4G34630,AT4G34670,AT4G34990,AT4G35220,AT4G35370,AT4G35410,AT4G35650,AT4G35690,AT4G35730,AT4G35740,AT4G35840,AT4G35880,AT4G36180,AT4G36290,AT4G36380,AT4G36520,AT4G36590,AT4G36660,AT4G36810,AT4G36920,AT4G36940,AT4G36980,AT4G37110,AT4G37210,AT4G37240,AT4G37320,AT4G37360,AT4G37470,AT4G37490,AT4G37530,AT4G37660,AT4G37740,AT4G38000,AT4G38050,AT4G38130,AT4G38170,AT4G38180,AT4G38210,AT4G38620,AT4G38630,AT4G38750,AT4G38890,AT4G38930,AT4G39000,AT4G39010,AT4G39150,AT4G39170,AT4G39210,AT4G39230,AT4G39280,AT4G39300,AT4G39330,AT4G39350,AT4G39510,AT4G39530,AT4G39630,AT4G39660,AT4G39680,AT4G39790,AT4G39840,AT4G39860,AT4G39920,AT4G40000,AT4G40010,AT5G01090,AT5G01180,AT5G01200,AT5G01230,AT5G01600,AT5G01650,AT5G01790,AT5G01800,AT5G01810,AT5G01910,AT5G01950,AT5G02220,AT5G02370,AT5G02470,AT5G02560,AT5G02590,AT5G02610,AT5G02630,AT5G02800,AT5G02850,AT5G02870,AT5G03050,AT5G03060,AT5G03140,AT5G03160,AT5G03200,AT5G03220,AT5G03370,AT5G03380,AT5G03460,AT5G03650,AT5G03740,AT5G03780,AT5G03810,AT5G03870,AT5G03930,AT5G03970,AT5G04070,AT5G04220,AT5G04270,AT5G04500,AT5G04510,AT5G04530,AT5G04610,AT5G04620,AT5G04660,AT5G04760,AT5G04770,AT5G04840,AT5G05030,AT5G05130,AT5G05180,AT5G05210,AT5G05260,AT5G05310,AT5G05510,AT5G05570,AT5G05620,AT5G05940,AT5G05990,AT5G06020,AT5G06110,AT5G06180,AT5G06190,AT5G06240,AT5G06270,AT5G06480,AT5G06780,AT5G06910,AT5G06920,AT5G06940,AT5G06950,AT5G06960,AT5G07060,AT5G07090,AT5G07160,AT5G07210,AT5G07250,AT5G07260,AT5G07270,AT5G07280,AT5G07340,AT5G07400,AT5G07590,AT5G07810,AT5G07850,AT5G07880,AT5G07950,AT5G07990,AT5G08020,AT5G08040,AT5G08100,AT5G08120,AT5G08170,AT5G08210,AT5G08260,AT5G08340,AT5G08450,AT5G08580,AT5G08620,AT5G09240,AT5G09330,AT5G09360,AT5G09370,AT5G09410,AT5G09490,AT5G09670,AT5G09730,AT5G09760,AT5G09860,AT5G09980,AT5G10220,AT5G10270,AT5G10350,AT5G10380,AT5G10400,AT5G10480,AT5G10490,AT5G10510,AT5G10610,AT5G10620,AT5G10830,AT5G10870,AT5G10930,AT5G11030,AT5G11040,AT5G11200,AT5G11220,AT5G11230,AT5G11300,AT5G11360,AT5G11390,AT5G11460,AT5G11510,AT5G11530,AT5G11690,AT5G11760,AT5G11780,AT5G11890,AT5G11900,AT5G12020,AT5G12060,AT5G12170,AT5G12220,AT5G12270,AT5G12290,AT5G12380,AT5G12400,AT5G12430,AT5G12440,AT5G12450,AT5G12460,AT5G12910,AT5G12930,AT5G12980,AT5G13400,AT5G13480,AT5G13490,AT5G13520,AT5G13600,AT5G13670,AT5G13680,AT5G13830,AT5G13840,AT5G13960,AT5G13980,AT5G14250,AT5G14410,AT5G14500,AT5G14600,AT5G14610,AT5G14640,AT5G14700,AT5G14850,AT5G14860,AT5G14920,AT5G14960,AT5G15000,AT5G15010,AT5G15070,AT5G15400,AT5G15440,AT5G15450,AT5G15520,AT5G15570,AT5G15610,AT5G15800,AT5G15920,AT5G16040,AT5G16060,AT5G16130,AT5G16250,AT5G16290,AT5G16300,AT5G16310,AT5G16690,AT5G16780,AT5G16790,AT5G16850,AT5G17010,AT5G17070,AT5G17100,AT5G17160,AT5G17250,AT5G17320,AT5G17410,AT5G17470,AT5G17530,AT5G17620,AT5G17690,AT5G17770,AT5G17800,AT5G17930,AT5G17980,AT5G18040,AT5G18230,AT5G18290,AT5G18620,AT5G18810,AT5G18900,AT5G18960,AT5G19180,AT5G19280,AT5G19600,AT5G19620,AT5G19690,AT5G20070,AT5G20160,AT5G20280,AT5G20410,AT5G20500,AT5G20830,AT5G20850,AT5G20930,AT5G21105,AT5G22030,AT5G22330,AT5G22370,AT5G22450,AT5G22650,AT5G22840,AT5G22940,AT5G22980,AT5G23070,AT5G23080,AT5G23210,AT5G23250,AT5G23290,AT5G23320,AT5G23390,AT5G23400,AT5G23420,AT5G23430,AT5G23480,AT5G23530,AT5G23570,AT5G23580,AT5G23610,AT5G23870,AT5G23880,AT5G23910,AT5G23940,AT5G24020,AT5G24330,AT5G24420,AT5G24440,AT5G24500,AT5G24510,AT5G24520,AT5G24670,AT5G24750,AT5G25220,AT5G25470,AT5G25610,AT5G25940,AT5G25950,AT5G26210,AT5G26220,AT5G26630,AT5G26650,AT5G26710,AT5G26760,AT5G26830,AT5G27000,AT5G27220,AT5G27330,AT5G27360,AT5G27380,AT5G27430,AT5G27670,AT5G27830,AT5G28740,AT5G34940,AT5G35550,AT5G35560,AT5G35900,AT5G35910,AT5G36160,AT5G36210,AT5G36740,AT5G37010,AT5G37170,AT5G37280,AT5G37520,AT5G37630,AT5G37890,AT5G38110,AT5G38140,AT5G38170,AT5G38360,AT5G38470,AT5G38890,AT5G38960,AT5G38970,AT5G39220,AT5G39260,AT5G39350,AT5G39440,AT5G39560,AT5G39700,AT5G39800,AT5G39850,AT5G40040,AT5G40150,AT5G40230,AT5G40250,AT5G40280,AT5G40360,AT5G40410,AT5G40430,AT5G40550,AT5G40680,AT5G40710,AT5G40760,AT5G40880,AT5G40930,AT5G41010,AT5G41190,AT5G41250,AT5G41450,AT5G41640,AT5G41850,AT5G41880,AT5G41970,AT5G42020,AT5G42090,AT5G42130,AT5G42140,AT5G42230,AT5G42240,AT5G42330,AT5G42350,AT5G42370,AT5G42700,AT5G42940,AT5G43080,AT5G43100,AT5G43140,AT5G43320,AT5G43500,AT5G43530,AT5G43990,AT5G44010,AT5G44200,AT5G44320,AT5G44360,AT5G44370,AT5G44480,AT5G44500,AT5G44700,AT5G44730,AT5G44740,AT5G44830,AT5G45020,AT5G45370,AT5G45610,AT5G45650,AT5G45670,AT5G45700,AT5G46040,AT5G46280,AT5G46540,AT5G46620,AT5G46740,AT5G46750,AT5G46920,AT5G46960,AT5G47020,AT5G47150,AT5G47160,AT5G47320,AT5G47330,AT5G47380,AT5G47390,AT5G47410,AT5G47460,AT5G47530,AT5G47630,AT5G47710,AT5G47780,AT5G47800,AT5G47870,AT5G47920,AT5G47930,AT5G47940,AT5G48030,AT5G48120,AT5G48600,AT5G48640,AT5G48650,AT5G48720,AT5G48750,AT5G48760,AT5G48810,AT5G48840,AT5G48870,AT5G48960,AT5G49050,AT5G49060,AT5G49160,AT5G49180,AT5G49310,AT5G49320,AT5G49410,AT5G49880,AT5G49950,AT5G50340,AT5G50420,AT5G50470,AT5G50730,AT5G50740,AT5G50820,AT5G50870,AT5G50990,AT5G51140,AT5G51250,AT5G51300,AT5G51600,AT5G51750,AT5G51770,AT5G51810,AT5G51880,AT5G52140,AT5G52210,AT5G52220,AT5G52240,AT5G52290,AT5G52330,AT5G52340,AT5G52480,AT5G52500,AT5G52630,AT5G52810,AT5G52910,AT5G52950,AT5G53060,AT5G53180,AT5G53240,AT5G53400,AT5G53420,AT5G53520,AT5G53620,AT5G53750,AT5G53840,AT5G53870,AT5G54090,AT5G54140,AT5G54280,AT5G54350,AT5G54440,AT5G54530,AT5G54660,AT5G54800,AT5G54830,AT5G54850,AT5G54860,AT5G54890,AT5G54900,AT5G54930,AT5G55080,AT5G55130,AT5G55210,AT5G55230,AT5G55250,AT5G55280,AT5G55300,AT5G55360,AT5G55560,AT5G55660,AT5G55670,AT5G55760,AT5G55830,AT5G55900,AT5G55920,AT5G55930,AT5G55950,AT5G56000,AT5G56030,AT5G56130,AT5G56180,AT5G56200,AT5G56280,AT5G56300,AT5G56370,AT5G56510,AT5G56580,AT5G56590,AT5G56660,AT5G56670,AT5G56700,AT5G56740,AT5G56940,AT5G57000,AT5G57020,AT5G57080,AT5G57110,AT5G57290,AT5G57350,AT5G57370,AT5G57410,AT5G57590,AT5G57655,AT5G57740,AT5G57860,AT5G57920,AT5G57970,AT5G58080,AT5G58110,AT5G58120,AT5G58190,AT5G58230,AT5G58280,AT5G58290,AT5G58370,AT5G58480,AT5G58500,AT5G58600,AT5G58820,AT5G58830,AT5G58960,AT5G58970,AT5G59100,AT5G59320,AT5G59380,AT5G59650,AT5G59700,AT5G59740,AT5G59810,AT5G59870,AT5G60040,AT5G60130,AT5G60140,AT5G60150,AT5G60160,AT5G60190,AT5G60440,AT5G60670,AT5G60710,AT5G60800,AT5G60870,AT5G61000,AT5G61040,AT5G61050,AT5G61120,AT5G61130,AT5G61150,AT5G61190,AT5G61300,AT5G61330,AT5G61360,AT5G61440,AT5G61460,AT5G61760,AT5G61770,AT5G61800,AT5G61865,AT5G61920,AT5G61930,AT5G62000,AT5G62150,AT5G62210,AT5G62410,AT5G62440,AT5G62500,AT5G62540,AT5G62550,AT5G62670,AT5G62700,AT5G62740,AT5G63040,AT5G63140,AT5G63410,AT5G63440,AT5G63480,AT5G63620,AT5G63630,AT5G63670,AT5G63730,AT5G63760,AT5G63830,AT5G63920,AT5G63950,AT5G63960,AT5G63990,AT5G64010,AT5G64090,AT5G64140,AT5G64410,AT5G64440,AT5G64510,AT5G64520,AT5G64550,AT5G64560,AT5G64570,AT5G64600,AT5G64650,AT5G64670,AT5G64816,AT5G64830,AT5G64860,AT5G64870,AT5G64900,AT5G64950,AT5G64980,AT5G64990,AT5G65120,AT5G65360,AT5G65370,AT5G65630,AT5G65710,AT5G65770,AT5G65900,AT5G66000,AT5G66120,AT5G66130,AT5G66150,AT5G66230,AT5G66350,AT5G66440,AT5G66660,AT5G66680,AT5G66710,AT5G66750,AT5G66820,AT5G66920,AT5G66940,AT5G66960,AT5G67100,AT5G67110,AT5G67160,AT5G67200,AT5G67230,AT5G67250,AT5G67270,AT5G67280,AT5G67320,AT5G67360,AT5G67460,AT5G67510 DAY_QPCR_UP Upregulated array results by qPCR and marker distribution (Table 1 PubmedID:18923020) AT1G19320,AT1G65300,AT3G23060,AT5G27000,AT1G65330,AT2G32460,AT4G25530,AT2G32370,AT3G24220,AT1G71890,AT1G09500,AT3G05310,AT2G35670,AT3G54560,AT1G02580,AT1G69770,AT3G11400,AT1G17130,AT3G55010,AT3G19160,AT4G28840,AT3G61300,AT5G65710 DAY_ENDOSPERM_UP Upregulated expression in the endosperm (Table 4 PubmedID:18923020) AT5G14960,AT1G16330,AT5G06150,AT5G25380,AT2G17620,AT1G44110,AT1G20610,AT3G11520,AT1G20930,AT1G73690,AT4G37490,AT3G54180,AT1G77390,AT5G11300,AT5G02470,AT2G32710,AT2G38620,AT5G43080,AT2G27970,AT3G50070 DAY_ENDOSPERM_DN Downregulated expression in the endosperm (Table 4 PubmedID:18923020) AT1G18040,AT3G01330,AT5G10270,AT5G64960,AT2G36010,AT4G03270,AT1G47870 DAY_CK_UP Upregulated CK signaling genes in the endosperm-preferred Data (Table 5 PubmedID:18923020) AT5G07210,AT4G11140,AT1G49190,AT4G23750,AT5G53290,AT4G00760,AT5G58080 DAY_CK_DN Downregulated CK signaling genes in the endosperm-preferred Data (Table 5 PubmedID:18923020) AT1G03430,AT3G29350,AT3G62670 DAY_SEED-SPECIFIC_ENDOSPERM-PREFERRED_UP Upregulated-valiDated early seed-specific, endosperm-preferred transcription factors (Table 6 PubmedID:18923020) AT5G40430,AT1G65300,AT5G26630,AT5G14960,AT3G56520,AT4G18870,AT1G65330,AT4G25530,AT5G07210,AT2G32370,AT4G21080,AT2G26320,AT5G56200,AT2G15740,AT5G17800,AT4G11400,AT2G01810,AT5G11510,AT3G27785,AT4G36590,AT1G49190,AT4G23750,AT5G60440,AT2G35670,AT4G38000,AT3G03260,AT2G34880 DAY_MADS_UP Upregulated MADS box transcription factors in the endosperm-preferred Data (Table 7 PubmedID:18923020) AT1G65300,AT5G26630,AT1G65360,AT1G47760,AT1G65330,AT2G26320,AT4G36590,AT5G60440,AT3G66656,AT1G31630,AT5G65330,AT5G26650 DAY_MADS_DN Downregulated MADS box transcription factors in the endosperm-preferred Data (Table 7 PubmedID:18923020) AT3G05860,AT5G65070,AT5G04640,AT2G18170 KASSCHAU_RNA_RDR2_DCL3_DIFF Significantly upregulated small RNA cluster proximal genes in rdr2 and dcl3 (Table S3 PubmedID:17298187) AT2G04030,AT2G23810,AT2G43290,AT5G24030,AT3G49270,AT4G09030,AT5G07990,AT3G17390,AT3G29810,AT3G50770,AT1G09970,AT1G15670,AT1G47280,AT3G50480,AT5G52070,AT3G26450,AT1G28230,AT5G35490,AT5G44170,AT2G30010,AT5G13200,AT4G04955,AT5G39050,AT1G28270,AT5G24655,AT1G72930,AT2G18660,AT3G28210,AT3G22231,AT2G34070,AT2G41380,AT2G32190 KASSCHAU_RDR2-DCL3-MUTANT_DIFF Significantly upregulated genes in rdr2 and dcl3 mutants (Table S2 PubmedID:17298187) AT3G28540,AT5G44170,AT5G54300,AT1G51820,AT1G25450,AT2G40460,AT3G51300,AT3G20520,AT4G01870,AT4G12420,AT2G04030,AT4G26690,AT3G20865,AT1G44100,AT2G34340,AT3G25165,AT3G54240,AT3G57260,AT5G54610,AT3G25170,AT2G44130,AT3G20220,AT2G46360,AT1G13890,AT4G13560,AT1G52540,AT2G13350,AT4G18800,AT4G17460,AT5G02490,AT5G07110,AT3G52600,AT5G18150,AT3G06740,AT1G62300,AT4G18425,AT1G23480,AT5G07440,AT4G30610,AT5G10695,AT4G27580,AT2G42580,AT2G34770,AT1G65310,AT1G21520,AT4G34138,AT5G05440,AT4G15550,AT4G01700,AT5G39050,AT2G27500,AT5G58782,AT2G37470,AT3G62640,AT5G05600,AT2G39680,AT2G30610,AT3G58620,AT4G30140,AT5G27870,AT4G20860,AT5G24030,AT3G26860,AT1G35490,AT5G40780,AT5G54095,AT1G74820,AT1G04770,AT4G34750,AT4G12720,AT1G63260,AT3G57450,AT3G19550,AT1G24170,AT2G02140,AT1G61720,AT1G19890,AT5G15350,AT2G47550,AT1G09240,AT4G22870,AT4G20830,AT2G30140,AT2G45210,AT2G31730,AT1G47280,AT5G64510,AT3G13950,AT4G12580,AT2G36950,AT3G51660,AT4G26780,AT4G33420,AT5G63850,AT2G45180,AT4G03210,AT2G37770,AT2G43820,AT3G61020,AT1G69840,AT5G26060,AT4G18290,AT2G30990,AT5G05340,AT1G59710,AT4G09030,AT4G18010,AT1G50460,AT1G70810,AT5G44020,AT1G75870,AT5G27350,AT4G30280,AT4G02130,AT5G38760,AT1G37130,AT5G37770,AT3G04070,AT3G48580,AT3G12110,AT5G65390,AT1G16950,AT2G29350,AT5G44130,AT2G04460,AT1G79620,AT5G41400,AT4G00050,AT1G33560,AT5G26330,AT4G24120,AT3G26450,AT4G00440,AT5G33290,AT3G53230,AT5G10430,AT1G62480,AT1G35910,AT5G36940,AT3G56290,AT1G62790,AT5G26655,AT1G28570,AT3G25290,AT4G33050,AT1G35730,AT1G29450,AT4G30190,AT4G10580,AT1G75780,AT1G72900,AT2G31900,AT4G39840,AT1G03820,AT5G42860,AT3G14660,AT1G28230,AT5G18060,AT1G12180,AT1G35290,AT3G44450,AT2G13760,AT1G63020,AT4G31870,AT4G14690,AT4G04830,AT2G15880,AT5G10830,AT2G39210,AT3G22240,AT3G05910,AT1G76160,AT3G44735,AT3G21420,AT5G18270,AT5G45840,AT3G26960,AT4G35060,AT1G76090,AT1G30700,AT2G31945,AT2G38480,AT5G13200,AT3G46660,AT3G06420,AT1G23350,AT5G25450,AT3G59350,AT1G15670,AT2G46860,AT2G43290,AT1G04430,AT5G57760,AT3G02910,AT5G16500,AT5G27980,AT1G59660,AT1G14360,AT3G08970,AT5G19240,AT5G25340,AT1G62180,AT5G02580,AT4G04955,AT5G24010,AT4G16563,AT3G49270,AT2G19770,AT2G17500,AT1G70090,AT5G38710,AT1G49800,AT4G28780,AT4G29285,AT1G08920,AT3G61930,AT1G72430,AT5G24655,AT3G07470,AT2G31880,AT4G02380,AT1G72930,AT3G26980,AT1G01310,AT1G19380,AT1G70985,AT5G13190,AT4G15800,AT5G52640,AT5G56540,AT3G15540,AT1G32170,AT5G50200,AT3G05490,AT2G02990,AT1G72150,AT3G01250,AT5G48570,AT1G17990,AT4G15190,AT1G28130,AT5G61605,AT5G54380,AT3G03430,AT3G28340,AT4G31000,AT5G65730,AT2G21640,AT5G57520,AT1G24996,AT5G53250,AT1G65490,AT1G34040,AT3G30775,AT4G08950,AT1G03870,AT5G52070,AT3G04000,AT1G61800,AT3G24510,AT3G28210,AT3G16040,AT4G21990,AT5G40690,AT2G21220,AT4G19430,AT3G45970,AT5G47350,AT2G29470,AT5G48850,AT3G49580,AT1G76960,AT2G32210,AT3G23730,AT2G45220,AT3G04210,AT1G08930,AT5G64120,AT4G15750,AT2G30930,AT1G02930,AT2G43510,AT2G41100,AT4G25810,AT5G26220,AT5G24660,AT2G44460,AT3G22231,AT1G66390,AT5G17450,AT5G63790,AT4G36110,AT1G52830,AT2G32190,AT2G21200,AT1G72110,AT4G00330,AT3G28740,AT5G03120,AT1G64640,AT4G08300,AT4G12730,AT5G35735,AT3G05900,AT3G03840,AT4G34135,AT5G59515,AT5G37600,AT3G50770,AT4G14130,AT1G09970,AT1G75750,AT1G21550,AT2G36790,AT4G38860,AT5G49480,AT3G49780,AT1G43910,AT1G22530,AT1G11545,AT1G75040,AT1G05560,AT5G60490,AT1G70270,AT4G13180,AT3G22840,AT1G76690,AT3G16150,AT2G29420,AT1G19020,AT5G45890,AT3G56090,AT1G14330,AT1G74010,AT4G10040,AT1G72510,AT1G61290,AT1G60240,AT1G72180,AT5G02200,AT5G46770,AT1G23100,AT3G19020,AT1G12070,AT2G01630,AT2G33570,AT1G64200,AT5G21105,AT4G03400,AT1G10550,AT5G44300,AT1G04250,AT3G01530,AT5G61820,AT4G38540,AT4G30270,AT2G19800,AT5G61010,AT3G05400,AT2G38640,AT5G50790,AT1G69570,AT1G28430,AT5G48470,AT2G21490,AT2G01850,AT4G18050,AT4G39670,AT2G30010,AT1G15520,AT2G23810,AT1G59730,AT5G36720,AT5G50260,AT1G63090,AT4G04490,AT1G53885,AT1G36370,AT4G38400,AT4G37370,AT1G51250,AT2G02010,AT4G08850,AT1G78600,AT1G28270,AT5G39280,AT3G08860,AT1G26820,AT1G68610,AT4G25590,AT5G55050,AT2G36410,AT1G13340,AT4G20260,AT2G40670,AT1G64405,AT3G44320,AT4G37800,AT3G26970,AT4G13340,AT5G52360,AT1G77760,AT4G18950,AT2G19000,AT5G17480,AT2G02810,AT5G16590,AT3G50560,AT4G14365,AT1G67865,AT4G28490,AT5G61790,AT4G15610,AT4G29520,AT3G56200,AT2G18660,AT5G42800,AT4G04610,AT3G01290,AT1G19500,AT3G55890,AT5G07990,AT5G23020,AT2G38310,AT3G11340,AT2G38900,AT2G17230,AT5G39610,AT3G22600,AT3G52620,AT1G05680,AT3G50480,AT3G10890,AT1G65500,AT5G62730,AT1G14870,AT4G21200,AT1G57990,AT5G40155,AT3G07340,AT1G30040,AT4G35725,AT4G37990,AT2G29460,AT4G37150,AT3G12580,AT5G11360,AT3G59900,AT3G60980,AT2G41230,AT5G01740,AT5G06720,AT4G18395,AT1G67860,AT2G17000,AT5G22300,AT3G05890,AT3G48970,AT2G36700,AT1G64360,AT3G54120,AT4G16640,AT1G65480,AT1G02220,AT3G30140,AT1G61920,AT5G19880,AT5G36930,AT3G07130,AT2G13770,AT2G19850,AT5G35490,AT2G03080,AT3G30720,AT2G34070,AT3G17390,AT5G58650,AT2G37540,AT1G22590,AT1G14130,AT3G50900,AT1G28600,AT2G41730,AT5G09440,AT2G21650,AT4G05590,AT3G13790,AT1G12110,AT3G22370,AT5G26340,AT3G29810,AT1G76520,AT2G41380,AT4G22710,AT5G42180,AT1G68620,AT1G29660 HOWELL_MIRNA_DIFF Differentially regulated -Targeted by miRNA (Table S1 PubmedID:17400893) AT2G27400,AT1G50055,AT2G39675,AT2G39681,AT3G17185,AT5G49615,AT5G57735,AT1G62910,AT1G63130,AT1G62930,AT1G63080,AT1G63400,AT1G63150,AT1G63070,AT1G63330,AT1G62590,AT1G62670,AT1G62860,AT1G63230,AT5G43740,AT5G43730,AT1G51480,AT1G12820,AT3G26810,AT3G23690,AT5G41610,AT2G46800,AT1G48410,AT4G08990,AT4G36920 HOWELL_TASIRNA_DIFF Differentially regulated -Targeted by tasiRNA (Table S1 PubmedID:17400893) AT1G62910,AT1G63130,AT1G62930,AT1G63080,AT1G63400,AT1G63150,AT1G63070,AT1G63330,AT1G62590,AT1G12300,AT1G62670,AT1G62860,AT1G12775,AT1G63320,AT1G63230,AT1G63630,AT1G12620,AT5G60450 HOWELL_NA-RNA_DIFF Differentially regulated -Targeted by NA small RNAs (Table S1 PubmedID:17400893) AT3G17185,AT5G49615,AT5G57735,AT1G62910,AT1G63130,AT1G62930,AT1G63080,AT1G63400,AT1G63150,AT1G63070,AT1G63330,AT1G62590,AT1G12300,AT1G62670,AT1G62860,AT1G12775,AT1G63230,AT1G12620,AT5G41610,AT5G60450,AT2G18170 KRINKE_SA-TREATMENT_UP Most induced genes after SA treatment, ranked by decreasing degree of induction (Table 1 PubmedID:17496105) AT5G03350,AT4G35180,AT1G31580,AT3G25882,AT5G22570,AT1G56580,AT3G11340,AT1G80590,AT1G66970,AT2G43820,AT1G03850,AT3G29240,AT1G19960,AT1G02450,AT5G24530,AT2G44370,AT1G09180,AT1G49750,AT1G70490,AT1G28480,AT2G40750,AT1G72930,AT1G17745,AT4G34630,AT2G47730 KRINKE_SA-TREATMENT_DN Most repressed genes after SA treatment, ranked by decreasing degree of repression (Table 2 PubmedID:17496105) AT4G24780,AT1G76160,AT4G22010,AT1G04680,AT4G30290,AT4G12420,AT1G64390,AT4G34950,AT1G29980,AT3G61820,AT2G41820,AT4G27720,AT5G51550,AT4G28250,AT5G23860,AT4G03620,AT4G12730,AT2G28950,AT4G37750,AT2G17230,AT5G15350,AT2G28790,AT1G73220,AT2G30780,AT4G33625 KRINKE_UPON-SA-TREATMENT_UP Induced expressed genes upon SA treatment. (TableS 1 PubmedID:17496105) AT5G03350,AT4G35180,AT1G31580,AT3G25882,AT5G22570,AT1G56580,AT3G11340,AT1G80590,AT1G66970,AT2G43820,AT1G03850,AT3G29240,AT1G19960,AT1G02450,AT5G24530,AT2G44370,AT4G26100,AT1G09180,AT1G49750,AT1G70490,AT1G28480,AT2G40750,AT1G72930,AT1G17745,AT4G34630,AT2G47730,AT5G45110,AT5G47120,AT5G47130,AT3G28540,AT2G45570,AT1G78380,AT1G69880,AT3G14990,AT2G41090,AT4G28490,AT1G72680,AT3G29034,AT2G39200,AT1G42990,AT5G56870,AT5G49450,AT1G76360,AT4G15530,AT3G15460,AT2G39210,AT5G48540,AT5G39050,AT1G23390,AT3G50960,AT1G34750,AT1G45145,AT5G55170,AT4G23700,AT1G02850,AT4G13180,AT4G38550,AT1G68840,AT5G38980,AT3G54420,AT3G14680,AT3G51980,AT4G35770,AT3G10300,AT5G62770,AT4G10500,AT3G60140,AT5G38530,AT1G72070,AT4G05490,AT3G50970,AT4G36670,AT5G01900,AT3G46280,AT3G62650,AT1G77120,AT4G21120,AT4G02520,AT2G30140,AT1G80920,AT5G05460,AT3G57700,AT2G30550,AT2G15490,AT1G16260,AT2G22330,AT2G41380,AT3G15980,AT1G21400,AT4G22530,AT3G16990,AT1G08050,AT2G25450,AT1G15380,AT5G61590,AT5G01210,AT5G07440,AT5G56230,AT4G34710,AT1G23440,AT1G69490,AT1G64660,AT2G03760,AT4G36040,AT5G63790,AT4G26070,AT3G26600,AT5G42050,AT1G67830,AT5G06860,AT4G23470,AT3G12120,AT1G56660,AT3G02770,AT5G61820,AT1G50740,AT1G49500,AT5G35080,AT1G58360,AT2G31890,AT4G26270,AT2G37750,AT4G38540,AT1G04980,AT2G26440,AT1G10340,AT1G76590,AT2G15890,AT4G24040,AT3G44310,AT5G37740,AT3G15500,AT3G45300,AT2G37970,AT1G19610,AT5G13080,AT3G28740,AT5G27760,AT5G54090,AT4G16760,AT3G17000,AT3G04070,AT3G49780,AT3G48080,AT3G59140,AT5G58650,AT5G17330,AT1G65730,AT3G09390,AT1G09080,AT3G55700,AT3G26510,AT1G58180,AT5G02380,AT2G36300,AT1G65800,AT5G42250,AT1G15790,AT2G42360,AT5G46050,AT1G17860,AT5G20250,AT3G52020,AT3G44340,AT4G31500,AT1G05300,AT3G06420,AT3G51000,AT1G79390,AT1G53580,AT3G10310,AT4G04620,AT5G19120,AT2G28110,AT4G30960,AT1G19530,AT1G78920,AT1G03400,AT1G53280,AT4G13040,AT1G53560,AT3G50480,AT1G51620,AT3G18830,AT3G28510,AT4G39670,AT1G10140,AT1G62020,AT5G03610,AT5G57350,AT2G18193,AT1G52890,AT3G48090,AT5G45510,AT1G60680,AT3G48690,AT5G47560,AT5G05320,AT1G65040,AT2G20670,AT4G29330,AT5G40670,AT5G58350,AT5G66360,AT2G23810,AT4G27070,AT4G01070,AT4G17900,AT3G44100,AT1G01490,AT5G06320,AT4G21920,AT4G15610,AT3G57020,AT1G21520,AT1G09560,AT2G33830,AT1G32460,AT4G31860,AT5G25770,AT1G76600,AT3G43800,AT2G33150,AT3G27890,AT2G04690,AT2G38480,AT4G11900,AT1G76070,AT2G23200,AT1G64280,AT2G37760,AT3G49530,AT3G15630,AT1G76520,AT2G31660,AT1G69890,AT2G44080,AT1G56330,AT5G54860,AT1G48320,AT2G46450,AT3G01970,AT2G29420,AT4G13510,AT2G30250,AT3G04520,AT2G35230,AT1G80830,AT1G76530,AT4G21580,AT2G37710,AT3G59570,AT5G63030,AT2G30520,AT3G10985,AT5G36930,AT1G77210,AT1G26800,AT4G23620,AT2G26170,AT3G07720,AT4G37220,AT3G23240,AT4G33300,AT4G11890,AT2G39520,AT5G39950,AT2G32920,AT3G21710,AT3G30390,AT3G62410,AT1G60480,AT3G17110,AT1G17020,AT2G24180,AT1G21770,AT4G14420,AT4G35750,AT4G19860,AT1G62420,AT4G14430,AT5G55970,AT3G13450,AT5G54170,AT3G26500,AT5G43580,AT2G39740,AT5G17380,AT3G53780,AT4G03510,AT5G42440,AT1G55120,AT3G48180,AT4G36090,AT3G44190,AT3G53990,AT2G35940,AT1G52290,AT2G42350,AT1G68440,AT5G43260,AT5G40370,AT3G04060,AT1G17960,AT5G25280,AT3G22210,AT3G03990,AT3G28570,AT5G19440,AT5G45500,AT1G23830,AT1G73800,AT1G14450,AT2G46220,AT3G28480,AT2G29650,AT1G18020,AT3G47340,AT3G52060,AT1G15750,AT1G76560,AT1G08830,AT5G14120,AT2G44380,AT5G54610,AT5G18170,AT2G40000,AT3G19930,AT2G04795,AT2G43510,AT5G39090,AT5G22800,AT1G15400,AT4G09460,AT1G64770,AT2G13790,AT2G28630,AT3G63080,AT3G15580,AT2G41250,AT2G44180,AT2G47470,AT5G54206,AT2G47270,AT3G06850,AT1G11890,AT1G23850,AT3G28210,AT3G52480,AT2G32150,AT1G52780,AT1G54100,ATCG00720,AT3G19580,AT4G11800,AT2G07180,AT2G02800,AT5G25940,AT2G46500,AT4G27290,AT2G25000,AT1G33110,AT2G45220,AT2G36835,AT4G25170,AT2G36330,AT5G07770,ATCG00730,AT5G53550,AT5G01350,AT1G59870,AT3G04000,AT1G13260,AT1G56460,AT4G28030,AT1G56220,AT5G64810,AT3G52105,AT4G01026,AT4G23890,AT2G23090,AT5G13330,AT2G40600,AT1G34580,AT3G22370,AT3G12545,AT2G16310,AT3G51750,AT3G48140,AT3G58780,AT1G16840,AT3G14280,AT5G64090,AT1G73650,AT5G18310,AT3G58750,AT3G23570,AT3G10815,AT2G39270,AT4G15560,AT5G26340,AT1G66240,AT4G31800,AT3G13062,AT2G01650,AT4G32670,AT1G75410,AT1G14380,AT5G25890,AT4G28290,AT3G14230,AT3G47160,AT3G24170,AT1G03770,AT3G45620,AT1G24460,AT5G14780,AT1G51400,AT5G24590,AT1G14200,AT5G48180,AT5G53970,AT3G56710,AT3G57160,AT5G42980,AT5G48657,AT3G59500,AT4G39780,AT3G10860,AT1G67480,AT1G65490,AT2G38860,AT3G14610,AT5G50200,AT2G30490,AT3G47833,AT1G77710,ATCG00380,AT2G27310,AT1G22750,AT1G66920,AT1G51650,AT4G23260,AT5G56100,AT3E49170,AT2G26690,AT5G19220,AT5G60400,AT2G35470,AT1G15230,AT1G73500,AT1G10010,AT1G10500,AT2G46150,AT4G34920,AT4G16520,AT3G11230,AT3G54960,AT5G38240,AT3G50260,AT2G13800,AT3G47070,AT1G80580,AT1G61660,AT3G51130,AT3G57010,AT1G11580,AT1G52220,AT1G66200,AT2G39725,AT1G55960,ATCG00160,AT1G27290 KRINKE_UPON-SA-TREATMENT_DN Repressed expressed genes upon SA treatment. (TableS 1 PubmedID:17496105) AT5G13300,AT2G26710,AT3G08943,AT2G26760,AT1G43580,AT4G39170,AT1G69295,AT2G26180,AT3G09950,AT2G42580,AT5G64110,AT3G15720,AT1G54690,AT1G54660,AT3G61310,AT2G46890,AT4G38420,AT5G56760,AT1G55490,AT5G24300,AT2G34850,AT2G19780,AT1G14770,AT1G19835,AT1G28400,AT3G23730,AT1G49870,AT1G66430,AT1G17360,AT4G27730,AT4G18030,AT3G54040,AT3G57150,AT5G04160,AT3G19590,AT1G62790,AT5G59970,AT3G59890,AT4G26690,AT1G02690,AT3G49670,AT3G13230,AT1G78530,AT1G53140,AT3G47690,AT5G10830,AT5G22440,AT1G78630,AT4G24830,AT4G39350,AT1G65240,AT4G35300,AT3G51950,AT3G24480,AT4G30800,AT2E26080,AT1G67050,AT1G71840,AT5G60390,AT5G57100,AT1G17480,AT5G05830,AT1G31660,AT1G53380,AT3G51720,AT5G33300,AT1G73010,AT4G12530,AT5G11150,AT3G06450,AT1G30690,AT3G04840,AT1G32500,AT1G70640,AT3G28050,AT1G30620,AT2G44830,AT5G55480,AT2G33560,AT5G22650,AT1G17140,AT3G28420,AT1G80530,AT5G42100,AT2G36420,AT4G21960,AT3G07460,AT2G47860,AT5G21105,AT1G74010,AT3G13510,AT5G47370,AT4G38660,AT4G35100,AT2G41830,AT2G38120,AT3G63140,AT1G43710,AT3G14240,AT5G55680,AT5G60920,AT5G27560,AT4G01730,AT5G44670,AT5G11090,AT5G43420,AT4G34980,AT3G18000,AT1G28390,AT1G11280,AT5G56030,AT1G75800,AT3G03780,AT5G11790,AT1G35550,AT5G22660,AT2G24150,AT4G05520,AT1G68550,AT3G51280,AT3G25130,AT5G65310,AT3G15354,AT1G09780,AT1G29950,AT1G19300,AT3G24660,AT3G07410,AT5G57130,AT2G33570,AT2G32990,AT3G45960,AT5G24030,AT2G31400,AT3G54260,AT3G17120,AT2G35190,AT5G40480,AT5G56010,AT5G24820,AT1G21880,AT3G06890,AT3G48610,AT5G42720,AT5G01710,AT5G09810,AT2G29450,AT4G31700,AT3G27970,AT1G04820,AT2G19170,AT5G15650,AT1G32860,AT5G24105,AT5G67270,AT3G10360,AT1G62330,AT1G70280,AT2G33400,AT2G39420,AT5G05840,AT2G34300,AT1G08560,AT3G54820,AT4G29340,AT4G13940,AT5G46710,AT1G61580,AT1G07880,AT3G16240,AT3G23810,AT2G01820,AT5G20540,AT5G08370,AT4G02150,AT2G05790,AT4G03100,AT1G78100,AT4G26760,AT2G34680,AT3G07540,AT4G27840,AT4G38050,AT5G55230,AT3G28180,AT5G50420,AT5G62940,AT1G60030,AT2G44500,AT5G12250,AT5G25100,AT1G15080,AT1G72610,AT1G70710,AT3G49220,AT5G52390,AT5G13290,AT5G53830,AT1G28290,AT2G14890,AT5G02870,AT5G05180,AT5G67360,AT5G11740,AT5G46290,AT3G52500,AT1G26850,AT4G11450,AT5G37010,AT1G53830,AT1G04430,AT2G01630,AT2G01760,AT3G06770,AT4G25630,AT5G05790,AT1G35140,AT3G18080,AT2G01610,AT3G54810,AT3G10440,AT1G23080,AT5G22740,AT5G02490,AT3G09540,AT3G14310,AT5G24600,AT2G31070,AT5G24010,AT4G32800,AT5G48450,AT5G09870,AT3G63120,AT2G42570,AT4G30440,AT3G51670,AT4G22740,AT3G28150,AT1G69580,AT1G05710,AT3G19370,AT4G20880,AT1G52470,AT1G51630,AT2G34510,AT2G34080,AT4G20890,AT2G40480,AT1G28110,AT3G25710,AT1G16520,AT1G03820,AT3G13470,AT3G62720,AT4G36010,AT1G75500,AT5G48070,AT1G73640,AT3G22840,AT1G55360,AT5G37770,AT3G08030,AT5G39320,AT2G42320,AT5G64170,AT3G18130,AT5G14000,AT5G40150,AT1G78060,AT5G16000,AT2G29550,AT1G68560,AT2G16660,AT2G36870,AT1G47670,AT3G05910,AT2G28510,AT5G45750,AT1G41830,AT1G71380,AT2G45470,AT4G08950,AT3G27400,AT5G64680,AT1G64760,AT2G21050,AT2G05920,AT5G24310,AT2G36570,AT2G41480,AT4G38400,AT1G26770,AT4G33625,AT2G30780,AT1G73220,AT2G28790,AT5G15350,AT2G17230,AT4G37750,AT2G28950,AT4G12730,AT4G03620,AT5G23860,AT4G28250,AT5G51550,AT4G27720,AT2G41820,AT3G61820,AT1G29980,AT4G34950,AT1G64390,AT4G12420,AT4G30290,AT1G04680,AT4G22010,AT1G76160,AT4G24780 KRINKE_SA-TREATMENT_UNFOLDED-PROTEIN_UP Induced-Overlap between SA-regulated and unfolded protein response-regulated transcriptomes. (TableS2 PubmedID:17496105) AT1G09210,AT4G21180,AT5G42020,AT4G24190,AT5G61790,AT5G07340,AT2G47470,AT2G32920,AT2G03120,AT2G45070,AT4G24920,AT2G18190,AT2G47180,AT2G02810,AT2G41490,AT3G52190,AT1G78920,AT1G11890,AT1G62020,AT2G25110,AT1G08650,AT1G10370,AT1G27350,AT4G12720,AT4G21810,AT2G41230,AT4G29520,AT4G34630,AT1G09080,AT1G09180,AT4G16660,AT2G46500,AT5G35080,AT4G19880,AT4G01810,AT4G11800,AT2G16060,AT3G24050,AT1G56170,AT4G15550,AT1G67360,AT4G26400,AT4G14430,AT2G38470,AT1G07670,AT5G59820,AT2G18690,AT4G02880,AT2G44080,AT1G31130,AT5G39580,AT5G08790,AT4G10040,AT5G67490,AT2G45680,AT2G28520,AT5G02490,AT2G41410,AT4G01080,AT4G15440,AT4G08870,AT2G35390,AT2G21210,AT1G21750,AT1G11720,AT5G52640,AT5G28540,AT5G42420,AT1G56340,AT1G77510,AT1G04980,AT5G58710,AT5G50460,AT1G29310,AT2G34250,AT1G27330,AT3G51980,AT1G65040,AT1G18260,AT5G03160,AT3G07680,AT4G21730,AT5G47120,AT5G09410,AT5G18090,AT1G56580,AT5G64510,AT5G14890,AT3G22235,AT1G29060,AT1G07810 KRINKE_SA-TREATMENT_UNFOLDED-PROTEIN_DN Repressed-Overlap between SA-regulated and unfolded protein response-regulated transcriptomes. (TableS2 PubmedID:17496105) AT5G44380,AT4G27520,AT3G52500,AT2G32810,AT3G12500,AT3G14310,AT5G61520,AT1G11580,AT4G19120,AT2G28630,AT3G44990,AT4G11320,AT4G21960,AT2G38540,AT1G54000,AT2G45470,AT4G32460,AT1G76490,AT4G35300,AT1G78820,AT4G38770,AT1G20840,AT2G37450,AT2G22170,AT2G43610,AT4G24510,AT1G04040,AT4G30810,AT4G23820,AT1G09750,AT2G04160,AT4G37470,AT4G37410,AT1G26850,AT1G61770,AT4G00400,AT2G24280,AT2G36830,AT1G72610,AT2G34490,AT4G21620,AT5G10430,AT3G19820,AT5G20630,AT5G64620,AT2G02040,AT1G68530,AT5G25610,AT2G05540,AT3G01930,AT3G32980,AT5G64100,AT3G53420,AT4G17340,AT1G75750,AT3G16370,AT4G30170,AT2G25510,AT2G39780,AT2G38530,AT5G67360,AT2G38380,AT3G10410,AT5G46900,AT1G54010,AT1G68560,AT1G70370,AT4G11650,AT2G38390,AT4G15160,AT2G37640,AT3G51600,AT4G13770,AT1G18250,AT2G19970,AT2G21140,AT5G64120,AT2G20230,AT4G16260,AT4G00180,AT5G18280,AT2G05790,AT4G19410,AT4G26690,AT4G36360,AT4G23400,AT1G05250,AT5G17820,AT4G00360,AT5G08610,AT4G12730,AT5G11720,AT2G24150,AT5G65730,AT1G62510,AT1G70160,AT2G44450,AT1G04680,AT2G43620,AT4G12510,AT4G37800,AT4G32980,AT4G12550,AT5G60920,AT4G02330,AT4G16170,AT4G25960,AT2G21410,AT2G15050,AT2G35780,AT1G33240,AT1G62500,AT4G38840,AT4G10770,AT1G22690,AT5G55630,AT1G78490,AT4G16370,AT2G36100,AT3G13790,AT2G22990,AT4G33220,AT2G15090,AT4G01700,AT2G36850,AT1G16410,AT4G00740,AT1G65270,AT4G11190,AT5G24770,AT5G24780,AT5G46890,AT1G05240,AT4G12520,AT4G12545,AT1G16400 KRINKE_W30-SENSITIVE-SA_UP Induced-Expression profiles of genes regulated by a W30-sensitive pathway in response to SA. (TableS4 PubmedID:17496105) AT5G03350,AT1G31580,AT5G22570,AT1G66970,AT1G02450,AT2G44370,AT4G26100,AT1G72930,AT1G17745,AT3G28540,AT1G69880,AT3G14990,AT2G41090,AT5G56870,AT4G15530,AT2G39210,AT5G48540,AT1G23390,AT1G34750,AT5G55170,AT1G02850,AT3G54420,AT4G10500,AT4G05490,AT4G36670,AT3G46280,AT1G80920,AT5G05460,AT3G57700,AT1G16260,AT3G16990,AT5G61590,AT1G69490,AT4G26070,AT1G67830,AT5G35080,AT1G04980,AT1G10340,AT2G15890,AT3G44310,AT1G65730,AT1G09080,AT3G26510,AT1G65800,AT5G42250,AT5G46050,AT4G31500,AT3G51000,AT1G19530,AT1G78920,AT1G53280,AT3G50480,AT1G51620,AT3G28510,AT5G40670,AT4G11900,AT2G23200,AT2G31660,AT1G56330,AT4G13510,AT2G37710,AT5G36930,AT1G77210,AT4G23620,AT2G26170,AT4G37220,AT2G32920,AT5G42440,AT1G55120,AT1G52290,AT3G03990,AT3G28570,AT5G45500,AT1G23830,AT3G28480,AT2G29650,AT3G52060,AT5G54610,AT3G19930,AT2G28630,AT2G41250,AT2G47470,AT2G47270,AT1G23850,AT1G52780,AT5G53550,AT1G13260,AT3G58780,AT3G14280,AT3G14230,AT3G47160,AT4G39780,AT2G38860,AT1G66920,AT5G19220,AT2G35470,AT2G46150,AT3G54960,AT1G66200 KRINKE_W30-SENSITIVE-SA_DN Repressed-Expression profiles of genes regulated by a W30-sensitive pathway in response to SA. (TableS4 PubmedID:17496105) AT1G69295,AT4G26690,AT1G70640,AT5G24030,AT5G11740,AT1G35140,AT5G24600,AT4G20880,AT3G62720,AT5G45750,AT4G08950,AT4G38400,AT1G26770 VAUGHN_CNP_LER/COL_UP Increased genes Exhibiting Significant CNP in in Ler relative to Col (TableS1 PubmedID:17579518) AT4G00140,AT4G00420,AT4G00610,AT4G00750,AT4G01000,AT4G01010,AT4G01810,AT4G02150,AT4G02320,AT4G02960,AT4G03050,AT4G03060,AT4G03070,AT4G03080,AT4G03090,AT4G03750,AT4G03770,AT4G03840,AT4G03850,AT4G04165,AT4G04167,AT4G04280,AT4G04655,AT4G05170,AT4G05280,AT4G05300,AT4G05510,AT4G05553,AT4G05633,AT4G06479,AT4G06480,AT4G06495,AT4G06496,AT4G06506,AT4G06532,AT4G06566,AT4G06572,AT4G06582,AT4G06602,AT4G06603,AT4G06604,AT4G06628,AT4G06656,AT4G06666,AT4G06670,AT4G06698,AT4G06700,AT4G06714,AT4G07031,AT4G07331,AT4G07415,AT4G07520,AT4G07524,AT4G07938,AT4G08033,AT4G08050,AT4G08078,AT4G08080,AT4G08095,AT4G08100,AT4G08111,AT4G08170,AT4G08190,AT4G08710,AT4G08750,AT4G08760,AT4G09425,AT4G10080,AT4G10340,AT4G11375,AT4G12440,AT4G13230,AT4G13430,AT4G13510,AT4G13710,AT4G14805,AT4G15090,AT4G15100,AT4G15320,AT4G15410,AT4G16000,AT4G16280,AT4G16490,AT4G16870,AT4G16910,AT4G16970,AT4G17240,AT4G17410,AT4G17580,AT4G17910,AT4G19240,AT4G20140,AT4G21380,AT4G21640,AT4G22180,AT4G22390,AT4G22415,AT4G27040,AT4G27050,AT4G27080,AT4G27745,AT4G28410,AT4G28650,AT4G28780,AT4G30935,AT4G30940,AT4G30950,AT4G31140,AT4G31880,AT4G32080,AT4G33290,AT4G33300,AT4G33390,AT4G33490,AT4G37235,AT4G38170,AT4G38750,AT4G38780,AT4G39060 VAUGHN_CNP_LER/COL_DN Decreased Genes Exhibiting Significant CNP in Ler relative to Col (TableS1 PubmedID:17579518) AT4G00440,AT4G00460,AT4G00510,AT4G00520,AT4G00730,AT4G01220,AT4G01340,AT4G01490,AT4G01595,AT4G01630,AT4G01640,AT4G01750,AT4G01860,AT4G01883,AT4G01890,AT4G01897,AT4G01900,AT4G01910,AT4G01915,AT4G01920,AT4G01925,AT4G01930,AT4G01935,AT4G01950,AT4G01975,AT4G02070,AT4G02130,AT4G02360,AT4G02400,AT4G02490,AT4G02540,AT4G02710,AT4G02725,AT4G02830,AT4G02910,AT4G02930,AT4G03292,AT4G03300,AT4G03310,AT4G03380,AT4G03470,AT4G03480,AT4G03490,AT4G03500,AT4G03510,AT4G03520,AT4G03800,AT4G03810,AT4G03870,AT4G03913,AT4G03920,AT4G03981,AT4G04000,AT4G04150,AT4G04200,AT4G04250,AT4G04330,AT4G04380,AT4G04390,AT4G04392,AT4G04393,AT4G04395,AT4G04400,AT4G04402,AT4G04404,AT4G04510,AT4G04590,AT4G04635,AT4G04700,AT4G04740,AT4G04780,AT4G04790,AT4G04800,AT4G04830,AT4G04850,AT4G04955,AT4G05030,AT4G05040,AT4G05073,AT4G05133,AT4G05270,AT4G05310,AT4G05450,AT4G05490,AT4G05520,AT4G05523,AT4G05526,AT4G05592,AT4G05631,AT4G05635,AT4G06196,AT4G06490,AT4G06517,AT4G06750,AT4G07310,AT4G07410,AT4G07425,AT4G07454,AT4G07480,AT4G07495,AT4G07510,AT4G07516,AT4G07521,AT4G07580,AT4G07662,AT4G07666,AT4G07670,AT4G07675,AT4G07696,AT4G07700,AT4G07706,AT4G07713,AT4G07720,AT4G07738,AT4G07740,AT4G07770,AT4G07795,AT4G07800,AT4G07803,AT4G07806,AT4G07810,AT4G07825,AT4G07840,AT4G07843,AT4G07868,AT4G07874,AT4G07915,AT4G07932,AT4G07935,AT4G08039,AT4G08090,AT4G08094,AT4G08101,AT4G08106,AT4G08340,AT4G08375,AT4G08480,AT4G08540,AT4G08550,AT4G08680,AT4G08868,AT4G08874,AT4G08995,AT4G09146,AT4G09200,AT4G09205,AT4G09210,AT4G09220,AT4G09230,AT4G09250,AT4G09255,AT4G09260,AT4G09280,AT4G09300,AT4G09310,AT4G09313,AT4G09316,AT4G09320,AT4G09360,AT4G09390,AT4G09400,AT4G09410,AT4G09420,AT4G09430,AT4G09450,AT4G09455,AT4G09480,AT4G09565,AT4G09595,AT4G09660,AT4G09690,AT4G09700,AT4G09710,AT4G09720,AT4G09750,AT4G09775,AT4G09780,AT4G09900,AT4G09930,AT4G09940,AT4G09950,AT4G10140,AT4G10310,AT4G10350,AT4G10450,AT4G10460,AT4G10550,AT4G10570,AT4G10600,AT4G10640,AT4G10650,AT4G10690,AT4G10695,AT4G10700,AT4G10770,AT4G10780,AT4G10830,AT4G10890,AT4G11030,AT4G11070,AT4G11080,AT4G11190,AT4G11200,AT4G11460,AT4G11490,AT4G11570,AT4G11630,AT4G11780,AT4G11800,AT4G11850,AT4G11910,AT4G11960,AT4G11970,AT4G11980,AT4G12030,AT4G12060,AT4G12120,AT4G12180,AT4G12275,AT4G12460,AT4G12830,AT4G12860,AT4G13010,AT4G13020,AT4G13050,AT4G13070,AT4G13110,AT4G13160,AT4G13180,AT4G13253,AT4G13255,AT4G13258,AT4G13259,AT4G13300,AT4G13330,AT4G13345,AT4G13442,AT4G13630,AT4G13640,AT4G13690,AT4G13700,AT4G13800,AT4G13885,AT4G13900,AT4G14070,AT4G14147,AT4G14370,AT4G14385,AT4G14460,AT4G14470,AT4G14730,AT4G15096,AT4G15215,AT4G15236,AT4G15290,AT4G15310,AT4G15340,AT4G15420,AT4G15570,AT4G15590,AT4G15700,AT4G15720,AT4G15930,AT4G15940,AT4G15950,AT4G16010,AT4G16015,AT4G16020,AT4G16180,AT4G16230,AT4G16720,AT4G16760,AT4G16765,AT4G16770,AT4G16800,AT4G16810,AT4G16860,AT4G16890,AT4G16920,AT4G16930,AT4G16935,AT4G16940,AT4G16960,AT4G17070,AT4G17450,AT4G18090,AT4G18250,AT4G18290,AT4G18310,AT4G18410,AT4G18420,AT4G18430,AT4G18580,AT4G18590,AT4G18730,AT4G18860,AT4G19038,AT4G19120,AT4G19410,AT4G19440,AT4G19470,AT4G19490,AT4G19500,AT4G19510,AT4G19550,AT4G19650,AT4G19780,AT4G19790,AT4G19930,AT4G19960,AT4G19990,AT4G20040,AT4G20170,AT4G20200,AT4G20210,AT4G20220,AT4G20230,AT4G20240,AT4G20250,AT4G20320,AT4G20350,AT4G20365,AT4G20440,AT4G20490,AT4G20520,AT4G20530,AT4G20540,AT4G20550,AT4G20560,AT4G20570,AT4G20580,AT4G20590,AT4G20600,AT4G20610,AT4G20620,AT4G20630,AT4G20640,AT4G20650,AT4G20670,AT4G20680,AT4G20700,AT4G20710,AT4G21110,AT4G21190,AT4G21400,AT4G21420,AT4G21865,AT4G22040,AT4G22110,AT4G22120,AT4G22310,AT4G22320,AT4G22450,AT4G22690,AT4G22870,AT4G23120,AT4G23160,AT4G23220,AT4G23230,AT4G23240,AT4G23620,AT4G23820,AT4G23860,AT4G24980,AT4G25315,AT4G25420,AT4G25450,AT4G25870,AT4G26190,AT4G26360,AT4G27190,AT4G27200,AT4G27210,AT4G27220,AT4G27830,AT4G27850,AT4G27870,AT4G29770,AT4G29960,AT4G30200,AT4G31120,AT4G32210,AT4G33905,AT4G34650,AT4G36120,AT4G36140,AT4G36150,AT4G37620,AT4G39930,AT4G39940 HOEKENGA_AFGC_AL_UP Al-inducible genes identified in AFGC Microarray Experiments. (TableS1 PubmedID:12805622) AT5G16010,AT2G18670,AT1G57990,AT5G59820,AT1G19020,AT5G48180,AT3G09390,AT1G62300,AT2G04350,AT3G07390,AT2G02040,AT2G22470,AT5G25250,AT4G30290,AT3G52400,AT3G09270,AT4G38060,AT2G23810,AT5G39590,AT2G17500,AT1G58032,AT5G10700,AT1G17340,AT3G29240,AT3G22620,AT4G14330,AT5G09530,AT2G45910,AT5G17020,AT3G10800,AT3G59990,AT5G20230,AT4G24160,AT5G04930,AT5G54540,AT1G52420,AT3G10640,AT4G24690,AT5G47050,AT3G01290,AT3G54200,AT2G41380,AT2G05630,AT5G62460,AT4G34120,AT1G75900,AT3G01420,AT3G59350,AT5G47120,AT5G41080,AT1G31130,AT2G11240,AT1G76160,AT5G61820,AT3G62270,AT5G09410,AT5G64310,AT3G15450,AT5G23450,AT5G46180,AT1G05340,AT2G34930,AT1G66180,AT1G18980,AT1G53165,AT1G64950,AT3G52850,AT1G28135,AT1G61250,AT2G33120,AT4G16760,AT4G26690,AT3G17770,AT3G47340,AT5G11730,AT3G05500,AT4G23850,AT5G47560,AT1G50630,AT5G44610,AT1G56220,AT4G08950,AT3G11130,AT4G29950,AT3G18860,AT3G48340,AT5G65470,AT2G32150,AT1G25400,AT2G17760,AT3G09840,AT4G22810,AT4G39090,AT3G04240,AT3G13790,AT1G08570,AT2G37050,AT5G42050,AT1G21680,AT1G33560,AT1G70780,AT2G22500,AT4G30270,AT5G14420,AT4G35310,AT1G77900,AT3G59700,AT5G06760,AT1G14830,AT5G50900,AT1G07890,AT1G51950,AT3G11780,AT5G06870,AT5G66930,AT1G58180,AT3G14050,AT2G40000,AT4G25670,AT4G29040,AT5G52640,AT3G47730,AT5G16050,AT5G04410,AT2G45600,AT5G35690,AT5G54940,AT1G08510,AT1G18470,AT1G20160,AT2G41410,AT1G77000,AT3G05360,AT3G09440,AT4G39670,AT5G17640,AT5G54430,AT1G69830,AT4G04910,AT5G58070,AT1G25280,AT2G27500,AT4G34710,AT5G18130,AT5G59310,AT1G04810,AT1G50420,AT1G76550,AT2G47730,AT5G26030,AT1G32230,AT4G05020,AT4G15610,AT1G16010,AT1G36730,AT4G10610,AT5G28350,AT1G04400,AT3G50930,AT5G13030,AT5G58100,AT1G76970,AT2G13360,AT2G39650,AT2G41100,AT4G17230,AT5G44180,AT1G18330,AT1G27320,AT4G22690,AT5G41990,AT5G67600,AT3G60420,AT4G24570,AT1G66880,AT4G12720,AT4G23630,AT5G60360,AT1G79440,AT3G09830,AT3G13520,AT3G51370,AT5G24090,AT1G49580,AT1G54100,AT2G26670,AT3G29360,AT3G53990,AT3G61580,AT3G63170,AT5G26751,AT5G02020,AT5G46410,AT2G44790,AT3G05420,AT4G19920,AT4G32940,AT5G14930,AT1G79930,AT2G33150,AT3G06500,AT3G17510,AT3G08590,AT3G10980,AT3G19420,AT3G22600,AT3G24500,AT4G30960,AT5G42100,AT5G53130,AT1G31910,AT1G59610,AT2G17190,AT3G13720,AT5G51570,AT5G57340,AT1G20440,AT1G29150,AT2G27830,AT4G28300,AT4G33300,AT4G39950,AT1G55450,AT1G72700,AT3G14990,AT5G61210,AT1G49570,AT1G53430,AT1G72900,AT4G17900,AT4G21660,AT5G19530 PEREZ-AMADOR_DST1-PARENTAL-PLANT_UP Genes with Increased mRNA Levels in dst1 versus Parental Plants (Table2 PubmedID:11752382) AT1G78080,AT1G22190,AT5G13930,AT5G05270,AT2G28900,AT3G56360,AT1G56650,AT2G41410,AT5G56010,AT3G44260,AT5G09850,AT2G27830,ATG68490,AT3G28270,AT1G62180,AT3G26000,AT5G11200 PEREZ-AMADOR_DST1-PARENTAL-PLANT_DN Genes with Decreased mRNA Levels in dst1 versus Parental Plants (Table3 PubmedID:11752382) AT2G26560,AT4G35770,AT4G27450,AT5G49360,AT1G11260,AT3G26740,AT5G45510 POECKE_C2_6H_PST-AVRRPT2_DIFF Differentially regulated genes in cluster c2 are from gene-expression profiles 6h after inoculation with Pst avrRpt2 (Table S2 PubmedID:18083910) AT1G19150,AT1G72610,AT2G21660,AT2G30250,AT2G43710,AT3G28210,AT4G24290,AT4G34200,AT4G37370,AT5G06860 POECKE_C5_6H_PST-AVRRPT2_DIFF Differentially regulated genes in cluster c5 are from gene-expression profiles 6h after inoculation with Pst avrRpt2. (Table S2 PubmedID:18083910) AT4G11840,AT2G45570,AT3G09010,AT5G43320,AT5G02120,AT1G14870,AT5G42650,AT2G13810,AT1G26380,AT2G17500,AT4G23600,AT2G14620,AT2G02930,AT4G25900,AT1G20440,AT5G25610,AT2G38540,AT4G25030,AT3G16370,AT5G52310,AT3G26830,AT5G22300,AT5G54810,AT4G39330,AT1G21240,AT4G32930,AT2G28210,AT5G07440,AT2G15970,AT4G38540 JONES-RHOADES_NEWLY-ANNOTATED-DIF1_DN Newly annotated dif1 downregulated genes (Table2 PubmedID:17937500) AT1G01305,AT1G11362,AT1G14455,AT1G50325,AT1G56385,AT1G56418,AT1G77525,AT2G18938,AT2G23142,AT3G03828,AT3G54925,AT3G55254,AT4G02655,AT4G03945,AT4G09462,AT4G09464,AT4G09466,AT4G09467,AT4G24974,AT4G28775,AT5G04047,AT5G27238 JONES-RHOADES_RE1_DN Dif1 down-regulated genes (TableS5 PubmedID:17937500) AT1G57775,AT1G57777,AT5G34881,AT5G34905,AT4G08025,AT5G34887,AT3G44115,AT1G45215,AT5G36320,AT5G36310,AT5G36340,AT5G36460,AT5G36350,AT5G36380,AT5G36450,AT5G36470,AT5G36390,AT5G36400,AT5G36410,AT5G36420,AT5G36430,AT5G36440,AT5G36370,AT3G03828,AT5G36360,AT2G21465,AT1G47470,AT1G77525,AT5G36490,AT1G45223,AT5G36500,AT5G36540,AT5G36480,AT5G42567,AT1G56553,AT5G36658,AT2G27315,AT3G30385,AT3G30387,AT5G36520,AT1G73603,AT5G34883,AT5G34882,AT1G45221,AT5G36657,AT5G42957,AT3G01185,AT5G36661,AT5G36738,AT4G09464,AT4G09467,AT1G57760,AT5G36550,AT2G04041,AT5G58412,AT5G36659,AT1G76750,AT4G09466,AT5G27495,AT1G49715,AT5G43510,AT1G58055,AT5G64720,AT3G57850,AT5G43525,AT2G12475,AT4G09153,AT4G09465,AT3G05460,AT4G02655,AT5G08315,AT4G11653,AT4G09462,AT5G42955,AT3G30383,AT1G01305,AT3G42565,AT5G35405,AT3G48231,AT4G07515,AT2G14378,AT1G47450,AT5G38330,AT4G08869,AT1G14455,AT2G24693,AT2G21750,AT5G60945,AT1G31450,AT5G43513,AT5G34908,AT4G13263,AT1G73607,AT4G11510,AT1G52970,AT4G13261,AT5G43285,AT3G29797,AT2G36325,AT5G42232,AT3G11990,AT5G46960,AT4G08875,AT5G23035,AT5G54062,AT5G51105,AT3G17150,AT5G60964,AT5G48953,AT5G36662,AT5G36739,AT3G04540,AT2G25482,AT5G34885,AT2G20595,AT1G45190,AT1G56385,AT1G50325,AT3G24065,AT2G06090,AT5G45910,AT5G63065,AT2G02490,AT2G24205,AT4G30067,AT2G35615,AT3G04545,AT5G60000,AT3G42473,AT2G21727,AT5G37474,AT5G52965,AT5G50423,AT2G21655,AT3G56610,AT1G32280,AT5G24316,AT2G04031,AT3G17080,AT5G16453,AT1G59835,AT4G17713,AT2G12465,AT4G24974,AT3G10890,AT3G50020,AT3G07005,AT3G57840,AT5G04047,AT2G21740,AT5G18403,AT4G39917,AT1G56418,AT3G01331,AT2G20597,AT4G22105,AT1G63522,AT5G60553,AT2G40995,AT3G30247,AT5G27238,AT2G36695,AT3G48205,AT1G35467,AT1G56620,AT4G30074,AT5G43518,AT2G04045,AT4G14276,AT4G35165,AT3G17230,AT1G65352,AT3G24510,AT2G04037,AT5G42895,AT4G32090,AT2G03933,AT5G22970,AT5G04347,AT3G17225,AT1G31530,AT5G33340,AT1G10745,AT1G51240,AT3G61182,AT5G63063,AT2G03040,AT1G22015,AT3G01323,AT5G40260,AT2G23970,AT5G18407,AT2G25185,AT1G73610,AT2G23142,AT1G36340,AT4G30590,AT4G03945,AT3G46850,AT5G52975,AT4G13955,AT1G32763,AT3G49307,AT2G23990,AT1G47780,AT5G63087,AT5G19172,AT1G56415,AT4G20800,AT3G02670,AT3G49300,AT2G01240,AT5G11940,AT5G07225,AT4G17505,AT1G26795,AT3G55665,AT3G54925,AT1G04645,AT1G10588,AT2G33233,AT3G43480,AT1G09370,AT1G13755,AT3G24068,AT3G48950,AT1G30974,AT2G28680,AT2G02515,AT5G23212,AT5G28000,AT2G35250,AT3G01327,AT4G19905,AT5G58830,AT1G78710,AT2G15180,AT5G52605,AT1G11362,AT4G09545,AT5G12380,AT4G30070,AT3G55254,AT1G60985,AT1G69818,AT5G18990,AT2G03290,AT5G09370,AT3G55252,AT4G39340,AT1G14755,AT5G60380,AT5G04350,AT5G55132,AT4G39490,AT1G68905,AT4G38700,AT3G05975,AT1G74010,AT1G77093,AT2G20660,AT2G19020,AT5G19175,AT3G10780,AT5G50050,AT1G10455,AT3G55680,AT5G46950,AT3G20993,AT2G39540,AT4G23350,AT2G15185,AT5G53742,AT1G79800,AT3G57310,AT3G43470,AT3G20997,AT3G01328,AT4G00190,AT2G38255,AT4G10220,AT5G25950,AT4G20050,AT2G47280,AT2G20070,AT1G68907,AT4G25530,AT5G44495,AT4G24975,AT5G39290,AT1G52415,AT4G17718,AT3G48300,AT5G12060,AT3G01322,AT5G39270,AT3G59260,AT4G18770,AT2G18938,AT1G09880,AT3G46840,AT3G48280,AT5G03930,AT3G14850,AT3G59960,AT4G19380,AT3G10900,AT4G28775,AT4G19645,AT5G65370,AT3G30540,AT1G52910,AT5G16230,AT4G35725,AT5G48595,AT1G40087,AT2G35670,AT5G53520,AT2G17690,AT5G41090,AT3G18080,AT1G15040,AT2G34890,AT4G14690,AT1G26796,AT3G07970,AT2G28010,AT1G53282,AT4G17860,AT5G59120,AT5G09500,AT1G17780,AT1G35720,AT3G25160,AT4G23882,AT4G16460,AT1G76790,AT5G20260,AT5G58820,AT1G06020,AT4G39650,AT2G43860,AT4G23360,AT1G30972,AT1G50960,AT2G37540,AT5G06170,AT1G06030,AT1G70030,AT3G14820,AT2G30220,AT1G21860,AT1G35537,AT1G02580,AT3G21620,AT2G23900,AT2G44570,AT2G30900,AT2G38230,AT5G38710,AT1G09510,AT3G44300,AT5G52130,AT1G47320,AT5G48515,AT4G15040,AT2G31030,AT4G16690,AT4G26260,AT1G20080,AT1G11730,AT3G28980,AT1G24570,AT1G11510,AT4G15053,AT4G26250,AT5G59520,AT3G46270,AT4G18050,AT3G14040,AT3G50440,AT1G30814 JONES-RHOADES_RE1_UP Dif1 up-regulated genes (TableS6 PubmedID:17937500) AT2G11405,AT1G76830,AT5G64190,AT5G46000,AT1G70680,AT3G57250,AT2G29940,AT3G13630,AT5G56540,AT1G72290,AT5G52390,AT3G15500,AT1G44970,AT5G50260,AT1G65670,AT1G20680,AT5G07680,AT5G43580,AT1G26820,AT1G17030,AT4G15610,AT1G20730,AT1G21950,AT4G11290,AT4G18425,AT1G12010,AT4G35030,AT3G23140,AT2G13550,AT1G17060,AT4G38390,AT3G19580,AT1G44130,AT5G13170,AT3G26140 JONES-RHOADES_MYB98_DN Myb98 down-regulated genes (TableS7 PubmedID:17937500) AT5G34881,AT5G34905,AT2G04041,AT5G34887,AT3G30385,AT3G30387,AT4G02655,AT5G34883,AT5G43510,AT5G42567,AT5G34882,AT4G11653,AT5G43525,AT5G35405,AT4G13263,AT5G42957,AT1G01305,AT4G13261,AT5G43513,AT1G47470,AT3G30383,AT5G42955,AT2G25482,AT1G52970,AT5G50423,AT5G34885,AT2G04031,AT5G34908,AT5G18403,AT3G17080,AT5G54062,AT1G35467,AT4G08869,AT5G43518,AT2G24205,AT1G45190,AT2G21727,AT5G22970,AT5G18407,AT3G11990,AT3G29797,AT5G43285,AT3G57840,AT1G47450,AT3G57850,AT2G04037,AT4G08025,AT4G20800,AT3G44115,AT1G56385,AT1G57760,AT5G60964,AT5G11940,AT5G45910,AT5G60000,AT4G00190,AT4G07515,AT1G57775,AT3G30247,AT1G45223,AT1G57777,AT1G68905,AT5G25950,AT1G45215,AT1G45221,AT4G32090,AT1G52415,AT5G39290,AT5G39270,AT2G27315,AT4G20050,AT1G17780,AT4G05631,AT4G19905,AT2G36325,AT5G48515,AT5G04047 JONES-RHOADES_MYB98_UP Myb98 up-regulated genes (TableS8 PubmedID:17937500) AT3G61880,AT5G44495,AT3G55680,AT1G78520,AT3G14760,AT5G45980,AT2G13550,AT1G44970,AT5G36661,AT5G36738,AT5G36480,AT5G36659,AT5G36657,AT1G72290,AT5G36540,AT1G04380,AT5G36370,AT1G15380,AT5G36500,AT5G36360,AT1G11540,AT5G36350,AT5G36380,AT5G36390,AT5G36400,AT5G36410,AT5G36420,AT5G36430,AT5G36440,AT5G36450,AT5G36470,AT5G36658,AT5G36520,AT5G36490,AT1G57590,AT1G01060,AT5G36460,AT5G36310,AT5G36340,AT4G35770 JONES-RHOADES_DIF1_PSEUDOGENE_DN Dif1 down-regulated pseudogenes (TableS9 PubmedID:17937500) AT1G12670,AT1G45225,AT5G42565,AT3G44117,AT1G11595,AT5G43516,AT1G45211,AT5G34903,AT1G12672,AT4G08022,AT1G45227,AT4G09470,AT5G36530,AT1G48422,AT2G21895,AT3G06995,AT3G30384,AT3G30386,AT3G30388,AT3G46250,AT4G10655,AT5G35420,AT5G36330,AT5G36510,AT5G44555,AT5G60978 NELSON_ABA_4H_UP Up-regulated genes -ABA 4 HR (TableS3 PubmedID:17923671) AT1G16850,AT3G50970,AT5G17460,AT2G42540,AT2G42530,AT5G15960,AT5G52310,AT4G34650,AT1G62570,AT2G15970,AT4G17550,AT1G04570,AT3G22600,AT1G18870,AT1G21790,AT1G20450,AT5G64260,AT1G51090,AT1G48100,AT1G20440,AT2G33380,AT3G44860,AT4G38400,AT1G09500,AT1G68500,AT2G03760,AT1G02820,AT3G56080,AT2G39800,AT2G43620,AT3G57020,AT2G27830,AT5G50800,AT2G23120,AT3G17130,AT1G78070,AT2G17500,AT5G15970,AT5G67480,AT1G09350,AT2G34430,AT3G57520,AT5G06870,AT2G38750,AT4G24960,AT1G68600,AT4G39210,AT3G28220,AT1G52000,AT5G01600,AT5G10410,AT4G16500,AT3G55610,AT5G59480,AT1G52660,AT5G37300,AT4G12000,AT5G24770,AT4G19390,AT3G26840,AT2G16990,AT2G16700,AT2G26560,AT2G26690,AT5G27930,AT1G64890,AT2G22970,AT3G28270,AT1G58360,AT5G57785,AT1G10090,AT2G03980,AT5G53420,AT5G44110,AT5G51990,AT5G38120,AT4G30650,AT3G61430,AT3G10260,AT5G19875,AT1G69870,AT5G39570,AT5G18600,AT2G47730,AT4G23630,AT4G21215,AT4G15450,AT4G36500,AT3G05660,AT1G78600,AT2G45820,AT5G20190,AT1G72450,AT2G39010,AT3G55760,AT4G37680,AT1G73325,AT4G30830,AT1G08570,AT5G56760,AT2G46640,AT4G35300,AT4G08930,AT1G27760,AT5G55450,AT5G14920,AT3G05650,AT1G43890,AT4G23710,AT3G52470,AT2G43530,AT4G04020,AT3G11780,AT1G19670,AT5G24570,AT2G06050,AT3G52340,AT4G34990,AT4G13560,AT2G29450,AT3G54820,AT5G12140,AT5G57887,AT5G15850,AT5G22630,AT2G02100,AT2G42750,AT5G61605,AT1G76570,AT3G18490,AT3G45260,AT1G51700,AT3G07310,AT5G57345,AT1G29390,AT1G33660,AT4G37070,AT5G54610,AT4G33220,AT1G54030,AT5G63160,AT1G35350,AT4G14090,AT1G20510,AT5G54810,AT1G05170,AT3G63310,AT4G15310,AT1G30360,AT1G58280,AT2G48020,AT1G65820,AT3G42140,AT1G74100,AT1G73010,AT5G03350,AT4G31420,AT4G18270,AT2G24560,AT2G28900,AT1G20650,AT4G34720,AT2G35630,AT5G19250,AT1G74520,AT5G42825,AT4G31140,AT1G70810,AT4G22880,AT4G10910,AT2G18230,AT4G05180,AT5G50790,AT2G23910,AT5G64570,AT2G30860,AT4G30530,AT5G59670,AT3G28940,AT2G01890,AT1G75040,AT4G16380,AT5G05850,AT5G15050,AT4G36250,AT5G17220,AT2G38670,AT1G13245,AT5G20650,AT1G33230,AT3G21510,AT4G39940,AT2G34620,AT5G62350,AT2G32580,AT4G32190,AT3G01210,AT4G31780,AT1G27920,AT4G13250,AT3G20670,AT1G47420,AT3G14200,AT1G25275,AT3G63160,AT4G15920,AT5G42800,AT1G07440,AT1G33590,AT2G25080,AT3G22231,AT5G03630,AT5G16250,AT1G65960,AT4G08390,AT5G48490,AT2G24790,AT4G16490,AT4G36640,AT1G50660,AT2G40460,AT3G28930,AT4G04340,AT4G23170,AT1G17190,AT1G19870,AT4G14880,AT5G58250,AT2G27030,AT1G56045,AT2G39330,AT1G17890,AT4G20970,AT4G22520,AT4G19410,AT1G55690,AT3G16230,AT3G61440,AT2G35490,AT4G33360,AT1G06080,AT5G22580,AT4G01450,AT1G74210,AT1G14580,AT5G46240,AT5G59540,AT4G12490,AT3G15356,AT2G20860,AT2G43590,AT2G23340,AT3G54500,AT5G58390 NELSON_ABA_4H_DN Down-regulated genes -ABA 4 HR (TableS3 PubmedID:17923671) AT1G55450,AT4G28440,AT3G23050,AT1G51400,AT3G48720,AT3G01550,AT4G23890,AT4G00330,AT5G28150,AT2G43150,AT5G34940,AT2G38870,AT1G14700,AT1G64500,AT2G22540,AT1G13770,AT4G23500,AT2G43630,AT3G08940,AT5G27560,AT1G76520,AT3G10720,AT2G26010,AT4G30140,AT1G20020,AT1G71140,AT1G11330,AT3G48340,AT1G04980,AT2G30490,AT1G70580,AT5G07030,AT3G54400,AT5G22300,AT2G25100,AT5G44530,AT2G16005,AT2G43130,AT1G79040,AT3G45770,AT3G02630,AT4G19410,AT5G53450,AT5G44420,AT3G11810,AT2G26020,AT1G30820,AT5G35480,AT4G18910,AT5G18380,AT3G14220,AT3G59400,AT2G37630,AT5G44430,AT3G28480,AT2G35960,AT5G20410,AT5G59080,AT4G34980,AT3G09540,AT5G19240,AT1G75830,AT2G30600,AT3G15030,AT3G54580,AT5G44190,AT1G14960,AT4G24350,AT1G13420,AT5G51010,AT1G11580,AT1G62380,AT5G20150,AT5G35490,AT4G32420,AT2G14560,AT5G11420,AT2G29690,AT1G01420,AT1G04040,AT2G31380,AT1G68520,AT5G17170,AT5G37980,AT1G80560,AT2G27190,AT1G19050,AT5G23060,AT2G45180,AT5G40450,AT1G09750,AT3G01060,AT4G20780,AT3G51290,AT5G47500,AT1G13120,AT5G14760,AT5G11670,AT4G14680,AT3G49110,AT4G26540,AT3G47380,AT1G23020,AT5G44020,AT3G50270,AT5G43020,AT5G35790,AT3G03770,AT2G02950,AT1G65490,AT5G02030,AT2G01530,AT5G62210,AT3G45640,AT2G26870,AT2G20750,AT2G40100,AT5G66690,AT5G24150,AT4G13770,AT4G08950,AT3G62040,AT1G66820,AT1G33600,AT3G45860,AT3G53720,AT5G53900,AT2G26330,AT2G37540,AT5G35735,AT1G23110,AT3G23550,AT1G69040,AT3G12610,AT4G36850,AT5G17820,AT4G25820,AT2G01520,AT3G28550,AT3G13350,AT1G29720,AT4G23290,AT4G11290,AT2G33050,AT4G38660,AT5G37990,AT2G30010,AT1G66270,AT2G11810,AT1G66140,AT3G44450,AT5G48010,AT4G02270,AT1G52190,AT1G80280,AT1G13110,AT5G48000,AT1G72910,AT2G32960,AT5G58310,AT5G61160,AT5G63780,AT4G30170,AT3G49620,AT4G27300,AT2G32290,AT5G47990,AT3G04210,AT5G23020,AT1G03870,AT2G21650,AT2G38310 NELSON_35S-CBF4_UP Up-regulated genes -35S::CBF4 (TableS3 PubmedID:17923671) AT1G09350,AT2G42530,AT5G51990,AT2G24560,AT2G42540,AT1G16850,AT5G52310,AT5G15960,AT3G05660,AT1G51090,AT3G55760,AT3G50970,AT1G48100,AT5G50800,AT2G43620,AT1G04570,AT3G17130,AT1G01420,AT5G15970,AT3G28220,AT2G15970,AT5G37980,AT1G68500,AT3G05650,AT4G17550,AT3G47380,AT4G20970,AT1G06080,AT4G12490,AT5G05850,AT4G24960,AT4G34650,AT1G20450,AT2G23340,AT3G09540,AT4G31140,AT1G14580,AT3G26840,AT4G15310,AT1G62570,AT4G30650,AT5G37300,AT4G30830,AT1G20440,AT4G15450,AT1G78070,AT4G18270,AT5G50790,AT1G52660,AT3G28270,AT2G23120,AT5G44530,AT1G30820,AT2G16990,AT2G28900,AT2G01890,AT1G21790,AT4G12000,AT1G30360,AT1G02820,AT1G05170,AT2G26330,AT3G45260,AT4G38400,AT4G21215,AT5G19875,AT4G32190,AT5G59080,AT5G17460,AT5G14760,AT4G34990,AT3G55610,AT1G55690,AT2G33380,AT1G64890,AT5G10410,AT4G30140,AT4G13560,AT1G33230,AT3G57020,AT2G40460,AT4G04020,AT1G08570,AT3G56080,AT2G26870,AT4G23290,AT3G54400,AT5G57887,AT1G27920,AT4G16500,AT2G20750,AT5G43020,AT5G55450,AT2G27830,AT5G27930,AT5G38120,AT3G53720,AT5G64260,AT4G04340,AT5G07030,AT3G54820,AT2G39800,AT4G23500,AT2G29690,AT1G23020,AT3G15030,AT5G15050,AT5G62350,AT5G47500,AT5G24570,AT1G10090,AT5G53450,AT3G03770,AT3G52470,AT5G46240,AT3G51290,AT1G69870,AT4G08950,AT4G35300,AT1G51700,AT3G01550,AT4G32420,AT1G20650,AT1G58360,AT3G18490,AT2G35960,AT1G19050,AT1G80280,AT2G26690,AT1G74520,AT4G34980,AT5G28150,AT1G69040,AT5G22630,AT4G26540,AT1G27760,AT1G65490,AT1G19870,AT3G01210,AT2G31380,AT4G38660,AT1G50660,AT4G16490,AT2G37630,AT2G45820,AT2G35630,AT2G16700,AT5G42825,AT4G22520,AT2G38870,AT3G20670,AT5G44190,AT5G62210,AT3G54500,AT2G42750,AT5G11420,AT2G24790,AT5G15850,AT2G39010,AT1G43890,AT1G66140,AT2G34430,AT4G10910,AT5G16250,AT1G65960,AT2G02100,AT4G23630,AT5G39570,AT4G31780,AT1G64500,AT5G18600,AT5G12140,AT1G29390,AT5G48490,AT2G35490,AT2G18230,AT1G09750,AT1G14700,AT4G28440,AT5G59480,AT3G59400,AT5G56760,AT2G43630,AT1G68520,AT5G58250,AT5G35790,AT2G29450,AT3G50270,AT1G76570,AT3G07310,AT1G56045,AT5G02030,AT2G20860,AT5G27560,AT1G51400,AT2G34620,AT4G36640,AT5G53900,AT1G70580,AT2G25080,AT5G24150,AT3G08940,AT4G05180,AT1G66820,AT3G13350,AT1G52190,AT5G23060,AT3G63160,AT5G63780,AT4G23890 NELSON_35S-CBF4_DN Down-regulated genes -35S::CBF4 (TableS3 PubmedID:17923671) AT5G63160,AT5G57345,AT4G34720,AT5G18380,AT1G07440,AT2G22540,AT4G39940,AT1G79040,AT5G57785,AT2G32290,AT5G44110,AT1G20020,AT3G23050,AT3G44450,AT3G01060,AT1G47420,AT2G30860,AT2G38670,AT5G54610,AT3G10720,AT3G16230,AT1G80560,AT4G14880,AT5G54810,AT5G34940,AT5G17170,AT5G20650,AT2G45180,AT5G35480,AT5G51010,AT3G61440,AT2G27030,AT1G65820,AT5G35490,AT1G13245,AT2G40100,AT2G30490,AT3G63310,AT4G36250,AT1G74100,AT3G02630,AT4G30530,AT2G25100,AT2G43530,AT3G61430,AT5G20190,AT2G43130,AT3G10260,AT4G13770,AT2G37540,AT2G30010,AT3G45770,AT2G47730,AT5G61605,AT5G19250,AT1G13120,AT4G33360,AT3G14220,AT4G13250,AT5G22300,AT1G70810,AT2G06050,AT3G28480,AT3G11780,AT3G28940,AT5G22580,AT5G59540,AT5G44020,AT5G03350,AT3G22231,AT4G19410,AT3G48720,AT3G42140,AT2G32580,AT2G48020,AT2G03980,AT3G12610,AT5G19240,AT1G58280,AT1G25275,AT5G17220,AT4G15920,AT2G02950,AT4G23710,AT4G22880,AT3G11810,AT1G03870,AT5G40450,AT4G16380,AT1G13770,AT2G43150,AT5G24770,AT2G23910,AT5G42800,AT5G14920,AT5G67480,AT1G71140,AT5G58390,AT1G76520,AT4G08390,AT4G00330,AT4G01450,AT2G38310,AT1G13110,AT2G14560,AT1G62380,AT4G39210,AT5G20150,AT2G22970,AT4G19390,AT3G28930,AT5G11670,AT1G54030,AT5G53420,AT1G17890,AT1G68600,AT3G52340,AT1G78600,AT2G27190,AT5G59670,AT3G45640,AT1G04980,AT2G32960,AT1G74210,AT3G57520,AT4G24350,AT2G38750,AT1G33590,AT5G58310,AT1G33660,AT4G33220,AT1G20510,AT2G46640,AT4G20780,AT1G33600,AT5G20410,AT4G23170,AT4G08930,AT4G36500,AT4G37680,AT4G14680,AT1G04040,AT2G30600,AT1G11580,AT3G45860,AT1G72910,AT4G31420,AT1G11330,AT3G44860,AT4G36850,AT5G23020,AT5G03630,AT1G17190,AT1G73325,AT4G14090,AT5G64570,AT1G09500,AT1G75040,AT2G03760,AT5G01600,AT1G55450,AT1G52000,AT1G29720,AT4G18910,AT2G39330,AT1G19670,AT3G48340,AT2G33050,AT3G22600,AT5G06870,AT1G72450,AT1G18870,AT2G17500,AT5G66690,AT4G27300,AT4G37070,AT1G14960,AT3G21510,AT2G11810,AT3G15356,AT5G35735,AT1G73010,AT1G35350,AT3G54580,AT2G01520,AT5G37990,AT3G62040,AT3G04210,AT3G28550,AT5G48010,AT1G66270,AT5G44430,AT3G23550,AT4G25820,AT2G26020,AT2G26010,AT4G02270,AT3G14200,AT5G44420,AT1G13420,AT2G16005,AT5G17820,AT5G47990,AT2G21650,AT5G61160,AT5G48000,AT1G23110,AT3G49110,AT1G75830,AT4G11290,AT3G49620,AT2G01530,AT4G30170,AT2G26560,AT2G43590 NELSON_35S-ATNF-YB1_UP Up-regulated genes -35S::atNF-YB1 (TableS3 PubmedID:17923671) AT5G38120,AT4G13560,AT5G44530,AT2G20750,AT3G56080,AT4G10910,AT5G35490,AT5G35480,AT4G31140,AT1G06080,AT4G22520,AT3G49620,AT5G37980,AT3G54500,AT4G15310,AT1G13245,AT1G52660,AT4G30140,AT5G48490,AT1G69040,AT5G57785,AT1G66140,AT5G18600,AT4G30830,AT2G27830,AT3G59400,AT4G23500,AT5G15850,AT2G42530,AT3G10720,AT1G52190,AT5G53900,AT1G14700,AT1G20650,AT2G42750,AT2G34620,AT5G02030,AT5G59080,AT3G07310,AT2G26330,AT2G34430,AT1G65490,AT3G01060,AT3G50270,AT5G57345,AT3G55760,AT5G14760,AT3G28270,AT3G23050,AT2G31380,AT5G06870,AT4G39940,AT3G17130,AT2G22540,AT3G08940,AT5G44190,AT3G57020,AT4G15450,AT4G04020,AT1G64500,AT2G46640,AT4G23890,AT4G23290,AT5G35790,AT5G64260,AT3G51290,AT5G23060,AT4G34650,AT4G32420,AT3G09540,AT1G51400,AT1G30820,AT3G53720,AT2G16990,AT2G38870,AT2G25080,AT1G71140,AT4G38660,AT5G59540,AT1G68520,AT3G15030,AT5G15050,AT1G19050,AT1G48100,AT1G19870,AT1G09750,AT5G53450,AT2G24790,AT4G26540,AT5G27560,AT4G18270,AT5G46240,AT5G37300,AT3G54400,AT2G40460,AT5G01600,AT4G12000,AT1G23020,AT3G20670,AT1G64890,AT4G05180,AT1G01420,AT5G22630,AT5G16250,AT2G20860,AT4G17550,AT3G45260,AT4G04340,AT5G57887,AT3G01210,AT3G54820,AT5G14920,AT2G43150,AT2G35960,AT4G14680,AT1G09350,AT2G23120,AT3G52340,AT3G18490,AT5G43020,AT5G07030,AT2G39010,AT1G27920,AT2G15970,AT2G37630,AT5G58250,AT3G14200,AT1G25275,AT2G29690,AT3G28550,AT1G80280,AT4G16490,AT4G13770,AT2G35630,AT3G28220,AT1G21790,AT5G05850,AT5G20650,AT2G03760,AT5G56760,AT1G10090,AT4G08950,AT1G62570,AT1G30360,AT2G29450,AT1G74100,AT1G27760,AT5G42825,AT1G50660,AT1G78070,AT2G28900,AT1G56045,AT3G11780,AT1G51700,AT4G21215,AT4G32190,AT2G26690,AT4G34980,AT5G12140,AT4G30170,AT5G52310,AT5G15970,AT1G20440,AT4G33220,AT5G24570,AT1G55690,AT5G51990,AT2G38310,AT3G62040,AT2G26870,AT1G29390,AT1G43890,AT5G11420,AT2G43630,AT4G16500,AT2G02950,AT2G47730 NELSON_35S-ATNF-YB1_DN Down-regulated genes -35S::atNF-YB1 (TableS3 PubmedID:17923671) AT2G22970,AT2G35490,AT4G28440,AT1G80560,AT2G48020,AT2G24560,AT1G74520,AT2G45820,AT2G01890,AT2G39800,AT3G23550,AT1G68600,AT1G54030,AT2G02100,AT3G52470,AT2G23340,AT3G26840,AT2G30860,AT2G30010,AT4G23630,AT3G14220,AT2G30600,AT4G08930,AT3G03770,AT3G61440,AT4G31780,AT1G58360,AT4G35300,AT1G62380,AT4G20970,AT3G63310,AT3G61430,AT2G45180,AT1G65820,AT2G32580,AT2G38750,AT4G19410,AT1G78600,AT4G14880,AT2G16005,AT5G59480,AT5G39570,AT4G33360,AT2G21650,AT3G48340,AT1G76520,AT2G16700,AT4G15920,AT5G40450,AT2G01530,AT4G30530,AT4G31420,AT3G12610,AT5G10410,AT5G28150,AT1G11580,AT5G50800,AT5G54810,AT5G51010,AT3G02630,AT3G48720,AT4G27300,AT3G28940,AT4G36250,AT3G47380,AT1G33230,AT3G54580,AT2G30490,AT5G27930,AT3G45640,AT2G06050,AT4G36500,AT1G04040,AT5G17170,AT3G10260,AT1G13110,AT5G47500,AT4G00330,AT5G53420,AT5G44020,AT2G42540,AT4G23710,AT4G18910,AT4G24960,AT4G30650,AT1G20450,AT5G61160,AT4G34720,AT1G33590,AT5G62350,AT4G01450,AT1G33600,AT1G13420,AT1G65960,AT5G03630,AT5G37990,AT3G15356,AT1G55450,AT3G45770,AT4G38400,AT2G01520,AT3G11810,AT5G58390,AT4G25820,AT1G20020,AT3G28930,AT1G29720,AT3G55610,AT5G22580,AT1G35350,AT1G08570,AT2G43530,AT1G18870,AT5G62210,AT1G03870,AT2G27030,AT5G18380,AT4G34990,AT1G19670,AT4G36850,AT1G66270,AT1G20510,AT3G49110,AT2G43130,AT5G11670,AT4G08390,AT5G19250,AT2G40100,AT3G28480,AT3G01550,AT4G24350,AT5G48010,AT5G66690,AT5G20190,AT2G33050,AT1G14960,AT1G47420,AT1G14580,AT5G64570,AT1G05170,AT1G52000,AT1G33660,AT1G72450,AT5G48000,AT1G68500,AT5G47990,AT4G11290,AT2G27190,AT5G17460,AT3G05650,AT1G72910,AT4G02270,AT5G19240,AT1G11330,AT3G22600,AT5G35735,AT1G17190,AT3G63160,AT4G13250,AT4G19390,AT4G16380,AT2G03980,AT1G66820,AT2G18230,AT3G05660,AT5G23020,AT5G67480,AT1G04980,AT1G79040,AT2G39330,AT5G17820,AT2G23910,AT5G34940,AT2G32960,AT5G50790,AT1G70580,AT1G51090,AT1G07440,AT3G44450,AT4G20780,AT3G21510,AT5G15960,AT2G17500,AT5G20410,AT1G04570,AT5G24770,AT5G55450,AT3G57520,AT1G76570,AT2G37540,AT2G43620,AT5G44110,AT3G22231,AT5G20150,AT3G16230,AT5G44430,AT3G13350,AT2G43590,AT1G23110,AT4G37070,AT4G23170,AT4G22880,AT2G33380,AT3G04210,AT1G75830,AT1G17890,AT1G69870,AT1G75040,AT2G26020,AT1G70810,AT4G14090,AT4G37680,AT1G58280,AT2G26010,AT5G63780,AT5G44420,AT5G42800,AT4G12490,AT1G74210,AT2G38670,AT5G19875,AT5G17220,AT5G24150,AT4G36640,AT1G13120,AT5G54610,AT5G63160,AT5G22300,AT1G13770,AT2G11810,AT1G73010,AT5G03350,AT3G50970,AT2G25100,AT4G39210,AT3G44860,AT2G14560,AT3G45860,AT5G61605,AT5G59670,AT3G42140,AT1G73325,AT1G09500,AT1G02820,AT1G16850,AT2G26560,AT2G32290,AT5G58310 ALVES-FERREIRA_AP3ES_UP Up-regulated genes -ap3es (TableS1 PubmedID:17905860) AT1G60300,AT1G01280,AT5G14070,AT4G22090,AT5G39310,AT1G68540,AT5G62320,AT2G35930,AT1G67990,AT5G07530,AT4G22080,AT1G30020,AT5G40220,AT1G77530,AT2G29460,AT2G31030,AT4G19620,AT2G19070,AT5G50260,AT1G44970,AT5G62080,AT5G61320,AT3G01240,AT1G76470,AT1G19230,AT1G11765,AT1G26710,AT2G03200,AT3G10580,AT2G39590,AT4G22790,AT1G65480,AT5G63350,AT3G01270,AT3G43860,AT1G02790,AT3G13220,AT3G07820,AT5G13700,AT1G13140,AT2G18610,AT5G39880,AT5G60080,AT5G40260,AT5G15140,AT3G18900,AT5G55590,AT3G54340,AT4G27580,AT1G73890,AT3G59480,AT5G56640,AT3G01250,AT1G69500,AT5G50060,AT2G47030,AT2G03170,AT1G47980,AT4G36430,AT4G13560,AT1G33430,AT4G14080,AT3G28750,AT5G09780,AT3G17010,AT5G37860,AT1G23350,AT3G07850,AT1G80440,AT3G05920,AT3G03430,AT2G15220,AT1G26720,AT3G28810,AT1G13670,AT4G29250,AT4G25330,AT1G50820,AT5G56570,AT5G59080,AT3G62040,AT2G32460,AT1G55560,AT2G40850,AT1G61070,AT1G48020,AT5G45880,AT1G06170,AT5G07430,AT5G15110,AT1G75790,AT5G48210,AT1G06280,AT4G35770,AT5G61430,AT2G01580,AT2G31500,AT2G47040,AT3G48360,AT3G21570,AT1G13150,AT5G07410,AT1G23840,AT4G03290,AT1G63200,AT5G36150,AT1G49330,AT1G62940,AT4G08710,AT5G11120,AT3G18610,AT2G40000,AT3G13400,AT3G26860,AT5G06839,AT2G23900,AT1G75920,AT3G45480,AT5G17590,AT5G08480,AT3G28820,AT5G62750,AT5G44120,AT3G59530,AT5G38760,AT3G01230,AT5G44400,AT2G02990,AT1G66850,AT5G38740,AT3G59510,AT1G14420,AT5G47220,AT1G12170,AT3G23310,AT1G03620,AT3G07450,AT4G28930,AT2G23800,AT1G79450,AT2G16730,AT5G62310,AT5G39610,AT3G54800,AT1G63950,AT1G11080,AT1G71400,AT1G72260,AT5G49070,AT3G01080,AT3G17060,AT2G31760,AT1G26800,AT3G57720,AT2G07040,AT1G47480,AT2G46860,AT3G62710,AT3G55570,AT4G37520,AT5G21940,AT1G75870,AT1G20150,AT5G56110,AT2G24450,AT2G36020,AT1G28375,AT5G23190,AT2G43620,AT5G55770,AT1G02510,AT3G48640,AT3G15500,AT3G02810,AT1G56220,AT5G07540,AT4G21900,AT1G55570,AT1G69560,AT1G78460,AT1G71770,AT1G16410,AT5G17480,AT1G66210,AT3G21180,AT5G20230,AT2G46950,AT3G07350,AT5G16700,AT3G13227,AT2G26940,AT1G66870,AT1G10070,AT2G31210,AT5G42630,AT5G04180,AT1G03390,AT1G28330,AT1G55640,AT2G47050,AT1G67920,AT1G18990,AT2G33830,AT5G43300,AT2G02140,AT1G01400,AT1G74540,AT1G80920,AT3G52620,AT3G06260,AT3G11480,AT5G53320,AT4G32500,AT1G67980,AT2G45430,AT1G54940,AT2G23970,AT5G20710,AT4G26830,AT3G28830,AT3G60140,AT2G26410,AT2G34340,AT1G30350,AT1G55420,AT1G18960,AT2G02930,AT5G09500,AT1G51250,AT3G62230,AT3G48340,AT2G25900,AT1G70220,AT3G20220,AT4G10850,AT3G09530,AT5G50830,AT5G59880,AT4G24040,AT1G04880,AT1G19660,AT2G18150,AT4G01180,AT1G51240,AT2G18700,AT2G43230,AT5G56870,AT1G06520,AT1G68290,AT3G57690,AT2G33420,AT2G26450,AT1G16950,AT3G17500,AT3G47340,AT1G53720,AT5G24420,AT2G41040,AT1G56030,AT2G31220,AT5G52290,AT5G61620,AT3G19020,AT3G61230,AT2G04750,AT4G27450,AT4G32510,AT5G12180,AT4G15760,AT1G56360,AT2G03850,AT3G04690,AT1G22090,AT5G56100,AT3G58990,AT1G02450,AT1G71160,AT1G51490,AT5G60510,AT2G30650,AT4G02250,AT1G69490,AT4G14780,AT2G05850,AT3G56180,AT1G23390,AT1G15415,AT1G18520,AT1G74010,AT5G38440,AT1G03050,AT5G12000,AT3G16040,AT3G04700,AT5G55890,AT3G19310,AT1G18980,AT1G60250,AT1G51420,AT5G07510,AT4G38390,AT3G52600,AT1G08260,AT3G15450,AT5G64240,AT2G19770,AT2G32150,AT1G17540,AT1G74460,AT3G59270,AT5G01180,AT3G26125,AT3G24230,AT1G70170,AT1G35490,AT5G07550,AT3G06830,AT3G14850,AT3G26440,AT3G02480,AT2G24370,AT3G52130,AT5G44300,AT5G07560,AT2G20470,AT1G61810,AT4G24890,AT3G19580,AT3G56360,AT2G39060,AT2G29470,AT5G17180,AT5G07420,AT1G70290,AT4G15100,AT1G23520,AT1G14860,AT1G52680,AT4G02380,AT5G07060,AT3G46750,AT1G64480,AT3G16380,AT1G02520,AT4G29460,AT5G46770,AT5G35110,AT4G37780,AT5G17950,AT3G04360,AT1G16110,AT1G76590,AT3G20530,AT4G10960,AT5G54570,AT5G58170,AT4G26440,AT5G33355,AT5G43620,AT4G20050,AT5G40690,AT5G49270,AT4G18510,AT4G22070,AT1G79910,AT5G38800,AT5G50360,AT1G70030,AT5G46950,AT2G35090,AT4G39110,AT5G63190,AT2G22510,AT5G63560,AT2G36180,AT3G05610,AT4G18920,AT2G32470,AT5G61590,AT1G70980,AT3G28870,AT5G64690,AT3G55840,AT4G36740,AT2G42140,AT1G70390,AT4G12280,AT1G48530,AT1G22760,AT5G22920,AT5G16410,AT5G15960,AT1G72230,AT5G50040,AT5G45150,AT1G15670,AT1G64670,AT1G16290,AT3G45560,AT2G34870,AT1G69570,AT3G62930,AT5G62960,AT5G39520,AT3G07840,AT4G09090,AT1G05020,AT5G26060,AT4G30110,AT4G15980,AT1G08630,AT3G17320,AT5G59310,AT5G56550,AT1G58210,AT4G36350,AT1G17615,AT2G16910,AT1G07645,AT3G42640,AT3G48390,AT1G17950,AT4G38590,AT5G09480,AT3G05930,AT1G27270,AT5G48140,AT3G20190,AT2G31980,AT2G17890,AT1G58120,AT1G30710,AT3G14820,AT3G47870,AT1G12080,AT3G13890,AT1G48800,AT1G13970,AT5G14870,AT1G31580,AT3G54490,AT1G68020,AT4G24640,AT1G29480,AT5G46970,AT1G24520,AT3G18810,AT5G39180,AT1G21740,AT1G23540,AT1G25240,AT3G26510,AT5G49180,AT1G60410,AT2G18550,AT4G16160,AT5G15430,AT3G50970,AT1G67623,AT1G50310,AT1G05340,AT3G25165,AT5G16920,AT2G36890,AT1G73220,AT5G23270,AT3G51130,AT5G55700,AT4G35180,AT1G14870,AT1G62935,AT1G04890,AT5G01640,AT3G52780,AT2G45610,AT3G61270,AT3G50510,AT5G55320,AT4G36490,AT3G07830,AT2G43010,AT2G37180,AT4G25780,AT2G13570,AT3G28780,AT5G44540,AT5G27600,AT4G37900,AT1G02660,AT5G16370,AT5G36260,AT5G26700,AT5G55170,AT1G58190,AT1G66760,AT5G46200,AT1G68110,AT4G39180,AT1G29140,AT1G31740,AT2G26850,AT1G33700,AT1G02400,AT4G12140,AT2G28680,AT1G20510,AT3G43120,AT3G03910,AT5G07680,AT3G15280,AT1G60570,AT5G13170,AT3G15440,AT3G10460,AT2G02710,AT1G08860,AT5G37870,AT3G08810,AT2G03000,AT3G52720,AT4G39360,AT1G44160,AT1G01980,AT5G66020,AT3G11440,AT1G74550,AT5G55930,AT2G47340,AT5G03690,AT1G06260,AT3G17980,AT3G55890,AT2G20670,AT4G09950,AT1G36970,AT3G03650,AT3G32902,AT2G19010,AT2G16750,AT2G02720,AT5G17300,AT1G80470,AT3G27210,AT3G13900,AT3G47950,AT1G12780,AT5G54780,AT3G50220,AT5G18010,AT4G31970,AT3G30280,AT5G43350,AT1G03090,AT1G57550,AT4G06746,AT4G26390,AT3G19090,AT2G47360,AT5G18130,AT2G25380,AT4G29880,AT1G24620,AT2G46360,AT3G13600,AT2G39570,AT3G20450,AT5G07520,AT5G04500,AT1G79400,AT2G03410,AT5G19600,AT1G68440,AT3G51190,AT3G49790,AT2G40990,AT3G61260,AT5G65870,AT1G05770,AT3G12500,AT5G46040,AT5G49920,AT1G78990,AT2G19000,AT4G13450,AT1G15890,AT5G65690,AT2G35300,AT2G10970,AT3G10740,AT3G58290,AT1G29860,AT4G01230,AT1G28130,AT1G80850,AT1G21140,AT1G19670,AT2G05330,AT3G53310,AT3G46520,AT5G09520,AT4G35670,AT2G25625,AT1G16760,AT5G65790,AT5G46080,AT4G18090,AT5G01820,AT4G13880,AT3G12660,AT3G17580,AT5G27260,AT4G03510,AT2G13350,AT4G10010,AT5G37810,AT5G10760,AT1G26590,AT4G28395,AT3G03190,AT1G20680,AT5G40430,AT3G62640,AT1G63180,AT3G54140,AT1G17030,AT2G33270,AT3G10320,AT1G75910,AT4G24230,AT4G27350,AT5G63590,AT1G19540,AT5G52360,AT2G21480,AT5G53650,AT2G45800,AT5G21170,AT3G21870,AT3G46660,AT1G49490,AT1G52240,AT5G44980,AT1G28700,AT3G08560,AT4G36600,AT5G03590,AT3G13390,AT5G39400,AT1G74340,AT3G23840,AT2G44420,AT2G26490,AT3G22600,AT5G09550,AT5G06980,AT1G09155,AT3G51000,AT2G37640,AT4G34060,AT1G76890,AT1G07330,AT1G14880,AT4G28790,AT1G78000,AT2G38400,AT3G08860,AT4G23250,AT1G19780,AT4G37250,AT4G22640,AT4G19690,AT4G21380,AT1G08670,AT1G80180,AT4G11360,AT1G01530,AT1G74020,AT5G09570,AT4G29190,AT3G23380,AT2G33870,AT1G70630,AT1G16850,AT1G66170,AT2G38010,AT1G01780,AT1G70640,AT1G12010,AT5G58460,AT3G10890,AT5G37690,AT3G11740,AT1G65990,AT3G28210,AT3G13910,AT1G69850,AT3G50130,AT4G13770,AT4G38190,AT1G23060,AT2G37010,AT2G25460,AT1G50990,AT1G75160,AT5G39110,AT1G03660,AT5G54010,AT4G36730,AT5G57000,AT1G23510,AT1G05580,AT3G15400,AT1G63140,AT3G55780,AT4G38650,AT4G33230,AT1G27710,AT4G17690,AT4G14630,AT3G04870,AT1G33270,AT1G34070,AT3G03820,AT4G39670,AT1G32170,AT2G23790,AT1G62280,AT3G52160,AT3G14060,AT3G25600,AT1G70020,AT3G11990,AT5G01100,AT5G02200,AT5G19120,AT5G63450,AT2G46210,AT3G60570,AT4G38310,AT2G41860,AT1G26610,AT5G03820,AT2G46880,AT1G52450,AT5G51460,AT5G42260,AT1G60450,AT4G05270,AT5G61120,AT5G45810,AT2G36110,AT5G45970,AT3G22730,AT5G65210,AT5G25950,AT4G01360,AT2G37670,AT2G33460,AT2G22180,AT3G15900,AT5G16770,AT5G66690,AT5G13580,AT1G33800,AT5G54700,AT3G48690,AT5G08730,AT4G18580,AT1G05330,AT4G23170,AT5G51970,AT1G03340,AT2G19110,AT4G31950,AT1G61470,AT3G11980,AT1G71110,AT3G25670,AT3G21970,AT5G41080,AT3G58260,AT5G62290,AT3G19930,AT3G14560,AT5G48950,AT1G35310,AT4G16190,AT3G61450,AT1G76480,AT1G67810,AT4G36850,AT3G15630,AT1G50880,AT1G68200,AT5G58050,AT3G51590,AT4G29980,AT5G45840,AT3G21700,AT2G42890,AT4G34750,AT4G30140,AT4G05570,AT3G46080,AT2G38500,AT2G20320,AT3G52010,AT1G01310,AT3G60780,AT1G15330,AT5G57690,AT3G22020,AT3G56960,AT3G15510,AT1G20130,AT1G03106,AT5G51720,AT1G59740,AT3G54880,AT4G20320,AT2G48130,AT2G39420,AT4G31330,AT5G44970,AT1G72960,AT2G40670,AT3G03540,AT1G80420,AT3G10340,AT3G13228,AT1G74490,AT1G79800,AT4G10260,AT4G34860,AT2G05530,AT3G10525,AT4G23560,AT3G57010,AT4G16745,AT1G48740,AT1G43800,AT1G27240,AT1G11260,AT2G41090,AT2G21990,AT2G05410,AT5G49450,AT3G03410,AT5G20250,AT3G43110,AT2G02810,AT1G58180,AT1G49290,AT5G13990,AT1G24400,AT3G25190,AT1G62450,AT2G07560,AT5G65110,AT2G27880,AT4G35610,AT5G51950,AT2G46680,AT3G45500,AT1G80820,AT5G38120,AT4G31020,AT1G66810,AT1G64660,AT5G54190,AT2G46370,AT3G19410,AT1G54540,AT3G18350,AT1G79250,AT3G45280,AT1G23730,AT4G08770,AT5G41900,AT5G18020,AT4G14040,AT1G54560,AT4G27110,AT4G27140,AT1G68610,AT1G28380,AT1G49270,AT3G24720,AT5G38450,AT2G28180,AT2G39350,AT4G12410,AT3G24620,AT5G07440,AT5G38710,AT5G59280,AT1G17710,AT3G20660,AT2G32340,AT5G12960,AT1G55510,AT2G04020,AT1G11190,AT1G22640,AT1G78720,AT2G31020,AT2G44220,AT2G29940,AT3G56920,AT1G04700,AT1G44120,AT1G03810,AT1G47270,AT1G80660,AT3G02380,AT4G25590,AT4G35420,AT3G44240,AT5G64790,AT3G47965,AT3G19680,AT5G53190,AT5G46050,AT4G00310,AT1G59722,AT1G23610,AT5G58750,AT3G54530,AT4G29470,AT1G04090,AT5G39580,AT1G64630,AT2G25630,AT4G29340,AT3G25930,AT3G05820,AT2G39400,AT1G35260,AT5G39420,AT5G10260,AT3G57620,AT5G56510,AT3G55190,AT1G74870,AT4G05130,AT1G26780,AT1G17990,AT1G17020,AT2G28120,AT4G04980,AT1G28550,AT4G34440,AT1G67070,AT1G29510,AT1G07476,AT2G30600,AT1G13890,AT1G56440,AT4G10910,AT5G58160,AT2G35730,AT1G65620,AT5G46060,AT5G57240,AT5G56980,AT4G20840,AT5G01060,AT3G49120,AT1G79860,AT3G46440,AT4G18190,AT1G24822,AT2G01330,AT1G13245,AT3G62730,AT1G70540,AT5G36130,AT5G45340,AT3G10410,AT5G22390,AT5G14480,AT2G28400,AT3G24700,AT1G72850,AT1G30700,AT1G19190,AT2G45040,AT5G03545,AT1G48590,AT4G30490,AT3G07120,AT5G05640,AT1G29010,AT3G60330,AT2G43520,AT1G74990,AT4G23500,AT2G03830,AT1G14370,AT3G61910,AT5G47000,AT1G15350,AT5G42170,AT5G16960,AT5G57320,AT1G03920,AT1G42980,AT1G59640,AT3G25280,AT1G26820,AT1G23010,AT4G37840,AT4G27410,AT1G54860,AT5G08030,AT4G26150,AT3G57390,AT1G29200,AT1G44478,AT4G13330,AT1G12600,AT1G10640,AT1G07540,AT5G53820,AT3G55990,AT1G18530,AT1G78140,AT2G27930,AT3G47350,AT1G34340,AT1G09210,AT5G62850,AT3G58480,AT5G37090,AT5G51250,AT5G17330,AT4G15120,AT1G68620,AT1G49520,AT1G20440,AT2G37750,AT1G12070,AT5G44140,AT4G24960,AT5G50210,AT2G21430,AT3G06080,AT1G21670,AT2G26910,AT3G13790,AT1G75940,AT2G47270,AT5G40570,AT1G23240,AT3G11910,AT2G03740,AT5G13150,AT5G07490,AT1G08990,AT3G60540,AT1G03905,AT2G38970,AT2G37280,AT3G03080,AT5G65330,AT3G24503,AT1G01120,AT1G25230,AT1G02580,AT5G24210,AT4G23660,AT1G08920,AT3G29035,AT3G45010,AT1G24600,AT5G38070,AT1G32450,AT2G47770,AT5G55090,AT3G07700,AT5G52900,AT3G16420,AT3G19710,AT1G10060,AT3G57330,AT1G22380,AT1G33055,AT4G05120,AT4G24430,AT5G14670,AT3G07070,AT1G28470,AT2G45220,AT3G23110,AT1G02230,AT1G11170,AT1G16140,AT1G64320,AT4G38570,AT1G71880,AT2G28760,AT4G35380,AT2G01020,AT1G24540,AT5G18160,AT1G13590,AT1G22100,AT1G66400,AT4G27810,AT1G74670,AT4G20460,AT3G43920,AT3G44300,AT5G54080,AT5G52460,AT3G01490,AT1G66460,AT4G23870,AT4G18550,AT1G70720,AT5G14890,AT1G51440,AT5G13670,AT1G67640,AT3G01980,AT4G03440,AT4G24540,AT1G26480,AT1G17840,AT4G15610,AT5G26320,AT5G51030,AT3G26430,AT3G03900,AT4G30850,AT5G07600,AT5G26220,AT5G03960,AT2G44230,AT2G38080,AT2G23170,AT3G44140,AT1G09970,AT2G39820,AT5G49900,AT2G14630,AT3G50580,AT3G51070,AT5G66170,AT1G26320,AT5G46230,AT1G71680,AT3G44040,AT4G34030,AT3G57510,AT3G51470,AT2G38340,AT1G72060,AT4G25040,AT2G34790,AT1G67540,AT2G38250,AT5G07010,AT1G62440,AT4G12430,AT1G44085,AT1G56630,AT3G57070,AT2G43080,AT5G67550,AT1G07340,AT1G23200,AT4G27970,AT2G30630,AT5G08540,AT4G30250,AT3G58370,AT5G17470,AT5G50780,AT5G48510,AT1G72280,AT1G52570,AT4G24380,AT3G42960,AT1G71170,AT1G23880,AT3G13610,AT5G24640,AT5G03210,AT4G25390,AT4G11650,AT3G28150,AT2G20700,AT4G02860,AT4G12530,AT3G25220,AT4G11760,AT4G30500,AT5G35090,AT1G54620,AT1G06250,AT5G41450,AT5G62240,AT4G28500,AT1G04580,AT2G40940,AT5G22260,AT3G45970,AT4G21490,AT1G34640,AT3G60920,AT5G10100,AT2G31830,AT2G29440,AT4G13980,AT5G47050,AT2G17440,AT3G03460,AT1G22400,AT1G62180,AT4G30810,AT4G34970,AT1G25380,AT5G55970,AT1G61630,AT5G54870,AT1G75520,AT2G16430,AT3G20200,AT1G78230,AT4G30870,AT5G13970,AT5G67390,AT3G05580,AT1G48960,AT5G57020,AT3G05165,AT2G42480,AT3G10100,AT4G37160,AT3G04720,AT5G41400,AT1G12030,AT3G16340,AT1G06970,AT5G26120,AT4G28700,AT5G16360,AT2G23510,AT2G31130,AT4G05020,AT1G08940,AT4G19080,AT1G64060,AT5G22680,AT3G25290,AT5G07570,AT5G53510,AT2G21490,AT3G06490,AT1G21070,AT1G49740,AT5G03760,AT4G03620,AT2G03090,AT4G33750,AT4G01140,AT2G10450,AT4G20420 ALVES-FERREIRA_AP3ES_DN Down-regulated genes -ap3es (TableS1 PubmedID:17905860) AT1G61290,AT1G29500,AT5G60010,AT5G48320,AT3G11430,AT3G01700,AT5G37670,AT1G44608,AT5G39820,AT1G75110,AT5G22200,AT1G08470,AT3G47440,AT1G03850,AT3G61760,AT2G45130,AT1G09610,AT5G04160,AT5G40645,AT2G46140,AT4G08290,AT2G27740,AT3G52870,AT2G19800,AT5G61800,AT2G41440,AT1G21250,AT4G28390,AT5G60660,AT3G62950,AT3G57900,AT2G29200,AT1G78940,AT2G43510,AT5G63060,AT4G39000,AT1G09880,AT5G43340,AT4G32480,AT3G03800,AT3G26790,AT1G32030,AT1G19394,AT2G31100,AT2G37090,AT5G23890,AT2G21140,AT5G04250,AT5G05850,AT1G55810,AT2G40450,AT4G04460,AT5G51580,AT2G30890,AT5G24650,AT5G45950,AT1G73260,AT1G71890,AT1G68750,AT5G41780,AT3G15830,AT3G22370,AT2G21640,AT5G05070,AT5G57880,AT4G22960,AT4G36700,AT4G24580,AT2G16360,AT1G11250,AT2G26530,AT1G65850,AT1G71810,AT5G40860,AT3G23770,AT3G07960,AT4G03330,AT4G16600,AT4G39800,AT5G41530,AT3G11040,AT4G29610,AT5G16490,AT1G22730,AT1G28430,AT1G69030,AT3G01020,AT5G20650,AT3G18360,AT2G37610,AT5G06760,AT5G24080,AT1G04920,AT4G35060,AT3G63350,AT4G00750,AT5G24790,AT1G07750,AT1G28710,AT2G03210,AT4G34210,AT5G14300,AT3G11050,AT1G17430,AT1G23560,AT4G32770,AT5G01920,AT3G60710,AT4G24120,AT1G13950,AT3G28917,AT1G77590,AT5G15600,AT5G46240,AT4G30270,AT4G03220,AT3G01630,AT3G52810,AT1G03070,AT3G11930,AT1G53035,AT1G72200,AT2G25230,AT5G13350,AT3G21320,AT2G46650,AT2G14900,AT2G22820,AT1G77310,AT1G09980,AT3G55240,AT2G45400,AT5G54400,AT5G24860,AT2G38240,AT3G13229,AT2G45310,AT5G54690,AT2G25890,AT3G26120,AT2G29980,AT4G34510,AT4G30470,AT1G41830,AT3G16920,AT2G16760,AT3G16150,AT3G02030,AT5G57810,AT2G41290,AT1G22990,AT2G41210,AT5G20410,AT1G75050,AT3G17660,AT3G19055,AT1G06990,AT5G60250,AT3G45720,AT1G51260,AT2G42570,AT1G16060,AT4G26200,AT2G45970,AT3G21230,AT3G16210,AT2G42940,AT4G37220,AT5G44030,AT4G16480,AT3G50770,AT1G50610,AT1G65560,AT3G04070,AT1G70430,AT3G42950,AT5G59845,AT1G31750,AT4G30170,AT3G01620,AT5G60640,AT3G43660,AT2G31945,AT1G74000,AT2G44430,AT4G37800,AT3G57520,AT1G21750,AT4G23580,AT4G27850,AT1G22110,AT4G20680,AT1G54870,AT4G15750,AT4G21780,AT5G07990,AT1G23040,AT1G23690,AT5G07830,AT4G28780,AT1G20120,AT2G32210,AT5G17200,AT5G45820,AT4G01540,AT5G43580,AT5G50120,AT4G23600,AT1G77760,AT4G26260,AT1G03980,AT5G14980,AT1G11870,AT1G60240,AT4G13240,AT1G70370,AT2G25240,AT4G05540,AT3G14450,AT4G25010,AT1G77380,AT4G27790,AT3G25810,AT1G75450,AT4G31870,AT5G15040,AT2G44260,AT3G42850,AT1G05290,AT5G41130,AT5G43570,AT5G11440,AT2G41570,AT1G04980,AT1G29460,AT2G24580,AT4G33740,AT5G46640,AT1G02900,AT5G37940,AT3G58310,AT1G66250,AT2G45560,AT1G61590,AT5G09530,AT2G20340,AT1G80100,AT4G28090,AT2G40460,AT5G05270,AT2G18950,AT1G11740,AT4G04610,AT4G13930,AT2G43710,AT1G32220,AT2G31270,AT1G63930,AT3G62430,AT3G17760,AT5G15190,AT3G03510,AT4G09820,AT4G07960,AT3G12860,AT1G80240,AT5G02570,AT2G21720,AT1G66360,AT5G01360,AT3G53300,AT4G26470,AT1G48470,AT1G63220,AT4G13080,AT5G12950,AT3G53720,AT5G53500,AT1G18280,AT5G06930,AT5G39240,AT2G23620,AT3G43630,AT4G13630,AT1G13910,AT4G01470,AT4G13990,AT3G61490,AT2G47160,AT3G50570,AT2G45290,AT1G31720,AT2G30070,AT1G36940,AT1G74100,AT2G18420,AT1G09030,AT2G32930,AT2G41690,AT3G17630,AT1G62290,AT2G40370,AT1G32250,AT1G54450,AT5G13930,AT1G71470,AT1G15470,AT2G18340,AT2G32890,AT5G44700,AT5G41800,AT5G03795,AT2G29790,AT3G54700,AT2G37980,AT3G26030,AT3G05960,AT3G04620,AT2G28110,AT1G17745,AT1G74960,AT5G59490,AT1G36160,AT4G04360,AT3G05140,AT5G22110,AT2G24610,AT5G14760,AT5G46990,AT5G67070,AT3G07320,AT5G03250,AT3G62440,AT3G51910,AT5G22020,AT5G09490,AT3G17830,AT4G04760,AT1G23760,AT2G40680,AT1G67550,AT3G60650,AT3G49560,AT2G32750,AT4G34050,AT4G30420,AT5G16460,AT2G16620,AT1G35910,AT3G24600,AT3G22360,AT5G18290,AT3G13065,AT5G12890,AT2G41780,AT1G20080,AT1G69350,AT5G53520,AT5G60880,AT1G04770,AT4G01160,AT5G57380,AT1G26680,AT3G56230,AT3G28840,AT3G29070,AT1G25510,AT4G36610,AT3G03760,AT3G45060,AT5G13870,AT5G02150,AT4G23920,AT3G03840,AT4G37420,AT3G10470,AT3G53080,AT2G16980,AT5G03620,AT1G80160,AT2G33690,AT5G02580,AT1G62270,AT5G61340,AT5G58310,AT3G21240,AT1G18880,AT4G08560,AT3G13380,AT2G15360,AT2G17690,AT3G47480,AT1G65590,AT5G02540,AT5G16440,AT2G24030,AT3G16120,AT4G18150,AT5G44410,AT1G04150,AT5G03810,AT2G41970,AT5G66650,AT4G30520,AT5G62210,AT5G08640,AT4G18780,AT3G61680,AT2G05540,AT2G44080,AT5G05340,AT5G17500,AT3G20940,AT5G54030,AT3G61810,AT4G16220,AT5G16570,AT5G60330,AT3G58960,AT5G25880,AT3G26940,AT5G43330,AT1G10620,AT3G49055,AT4G20780,AT4G08550,AT5G01910,AT1G05577,AT5G02720,AT1G17190,AT2G36880,AT2G36730,AT1G04450,AT5G54970,AT4G19420,AT2G45750,AT4G39580,AT5G41630,AT1G76210,AT4G24130,AT1G16510,AT5G49250,AT3G45710,AT1G63060,AT1G27030,AT3G23030,AT1G77160,AT4G36640,AT3G58240,AT3G16580,AT2G02300,AT5G53210,AT3G17790,AT4G04020,AT3G17225,AT2G16005,AT2G25880,AT5G63070,AT3G25730,AT3G19150,AT3G12320,AT3G04010,AT5G58390,AT5G64080,AT5G11420,AT5G53780,AT1G08400,AT3G62100,AT2G20800,AT1G23800,AT1G30050,AT5G50800,AT2G46970,AT2G16720,AT2G35420,AT1G05510,AT3G01530,AT2G39300,AT2G21510,AT2G21590,AT1G13130,AT3G22640,AT2G42990,AT1G33170,AT3G18660,AT4G04930,AT3G11020,AT5G02270,AT5G60740,AT2G46980,AT1G32375,AT5G17050,AT5G55570,AT2G30290,AT4G30290,AT5G24090,AT2G19500,AT4G31370,AT3G10040,AT3G05730,AT1G22130,AT3G61820,AT4G22880,AT1G44542,AT2G27670,AT3G06100,AT4G16590,AT5G43410,AT1G76240,AT5G40620,AT1G22240,AT4G28150,AT2G45210,AT4G15250,AT5G36720,AT2G34270,AT5G59320,AT3G52080,AT1G72460,AT3G07620,AT5G46650,AT4G25950,AT3G15540,AT1G15040,AT1G02930,AT5G48880,AT2G26400,AT3G26880,AT1G80130,AT2G38490,AT2G44450,AT1G07473,AT4G14130,AT5G07000,AT5G02430,AT3G55100,AT3G21940,AT4G08630,AT2G42950,AT1G07050,AT2G25510,AT2G30690,AT5G14360,AT5G66740,AT1G33770,AT4G02140,AT5G39870,AT5G62520,AT2G23910,AT4G01970,AT1G32780,AT5G60500,AT2G05910,AT4G33560,AT5G48570,AT1G78570,AT2G18470,AT3G26870,AT3G49160,AT3G02590,AT5G63600,AT1G77650,AT4G27310,AT1G51030,AT1G73510,AT2G15020,AT5G42340,AT2G02010,AT1G07090,AT2G38940,AT2G31865,AT1G80050,AT1G13470,AT4G12860,AT3G52740,AT3G51860,AT1G77980,AT2G22950,AT3G51240,AT3G48010,AT4G21990,AT5G57670,AT5G61610,AT5G42590,AT5G37170,AT3G55605,AT5G52390,AT2G16030,AT4G26030,AT5G06330,AT5G42500,AT4G10240,AT3G19140,AT1G77340,AT4G19380,AT3G50120,AT3G16710,AT5G64820,AT2G37040,AT2G18530,AT1G02360,AT5G07930,AT1G10680,AT4G25560,AT4G01430,AT2G45580,AT2G21650,AT2G24210,AT5G46940,AT1G25270,AT1G65170,AT2G14830,AT1G09380,AT5G48430,AT3G55870,AT4G18860,AT3G15720,AT5G17220,AT1G61680,AT3G58780,AT3G51660,AT3G46770,AT1G54955,AT1G69180,AT1G53010,AT4G15200,AT3G24610,AT1G15640,AT3G30210,AT4G26280,AT4G33820,AT4G18290,AT3G53550,AT4G38000,AT1G51410,AT1G66290,AT1G29830,AT1G37020,AT1G65880,AT1G61800,AT2G42830,AT5G36040,AT3G49270,AT3G29590,AT5G13940 ALVES-FERREIRA_SPL/NZZ_UP Up-regulated genes -spl/nzz (TableS1 PubmedID:17905860) AT3G62710,AT1G75910,AT1G30350,AT3G01270,AT1G28430,AT1G02790,AT1G75940,AT3G01240,AT3G17760,AT1G26720,AT3G51590,AT5G17480,AT1G62940,AT1G30020,AT1G67990,AT5G07510,AT1G50310,AT2G04020,AT1G28375,AT1G23240,AT3G07820,AT1G47980,AT5G44400,AT5G07560,AT5G07410,AT3G03430,AT3G01250,AT1G63060,AT1G06260,AT1G26710,AT5G62080,AT4G13560,AT2G16910,AT1G75920,AT5G65690,AT3G28830,AT3G15400,AT2G47030,AT1G13150,AT5G07600,AT2G23800,AT2G07560,AT4G28395,AT5G07550,AT3G07850,AT5G38760,AT3G28750,AT5G07520,AT1G33430,AT3G26860,AT1G56360,AT4G36610,AT3G28780,AT1G55570,AT1G56440,AT5G07530,AT2G19070,AT2G03850,AT3G02480,AT2G07040,AT4G14080,AT1G24620,AT5G07540,AT5G08030,AT1G23840,AT2G02140,AT4G10850,AT5G60500,AT5G45880,AT3G11980,AT2G47040,AT3G13390,AT3G52160,AT5G40260,AT1G13140,AT3G10890,AT1G61070,AT3G01230,AT1G06280,AT5G53820,AT3G11430,AT5G39880,AT4G04460,AT1G54860,AT5G07430,AT1G31740,AT3G21180,AT3G19020,AT3G13400,AT1G16110,AT5G56640,AT2G32890,AT3G26125,AT1G66850,AT2G36020,AT1G23520,AT2G31980,AT1G01280,AT3G05960,AT1G11765,AT3G28840,AT4G29250,AT1G78460,AT2G21490,AT3G28820,AT4G02250,AT2G16750,AT3G46520,AT1G48020,AT3G21970,AT3G18360,AT1G64670,AT1G13670,AT2G19770,AT1G74540,AT5G15110,AT3G21940,AT2G41570,AT1G15415,AT5G16920,AT2G28680,AT1G55560,AT5G61320,AT1G53720,AT4G38590,AT4G20050,AT1G69500,AT5G44300,AT5G09550,AT3G50970,AT1G35490,AT1G71770,AT5G62320,AT5G26320,AT5G48210,AT4G01230,AT1G04450,AT1G18280,AT5G46200,AT2G46860,AT1G76470,AT2G23900,AT1G75790,AT1G06990,AT2G19500,AT1G23690,AT4G36350,AT1G20120,AT5G59845,AT3G58310,AT1G66210,AT1G48470,AT4G29340,AT3G17630,AT5G44700,AT5G51030,AT5G55590,AT4G25950,AT1G52680,AT5G46650,AT4G27580,AT4G36600,AT3G52620,AT1G75870,AT2G47050,AT2G32460,AT3G07450,AT1G73220,AT2G24370,AT1G51410,AT3G15830,AT2G37750,AT4G10260,AT5G26060,AT4G25040,AT5G16770,AT4G24380,AT1G71680,AT3G54530,AT2G29790,AT1G14420,AT1G79450,AT1G23800,AT1G27710,AT2G20470,AT5G62850,AT5G50780,AT3G03910,AT3G50580,AT3G53080,AT2G03200,AT3G62230,AT1G62450,AT5G61430,AT3G59510,AT5G09480,AT5G37810,AT1G32250,AT1G80660,AT5G07420,AT4G02140,AT4G37900,AT1G22100,AT2G24210,AT1G67550,AT1G57550,AT5G50830,AT1G23610,AT5G06330,AT2G27670,AT3G19090,AT1G29140,AT5G13580,AT1G26320,AT1G22760,AT4G32510,AT3G03540,AT2G18420,AT5G55170,AT1G80100,AT5G46950,AT4G17690,AT1G18960,AT4G22080,AT5G52360,AT3G09530,AT1G18520,AT3G06100,AT3G23770,AT3G61810,AT4G14780,AT1G22110,AT3G28917,AT3G47340,AT3G57690,AT3G21570,AT5G16960,AT2G21990,AT2G45580,AT4G16160,AT1G67810,AT1G70980,AT5G09500,AT1G52570,AT2G41040,AT2G23970,AT2G31210,AT2G46880,AT2G26410,AT1G06250,AT2G03740,AT3G47870,AT1G58120,AT5G53190,AT3G59480,AT5G05340,AT5G03620,AT1G73890,AT1G05510,AT2G37280,AT2G21140,AT5G50040,AT1G70720,AT1G54560,AT5G04180,AT3G04620,AT1G79800,AT1G74550,AT5G54570,AT3G42850,AT5G49070,AT2G31500,AT2G18340,AT3G02810,AT1G63930,AT4G19620,AT1G05290,AT3G61270,AT3G13220,AT1G22130,AT4G39110,AT1G80470,AT5G60510,AT4G30170,AT3G15510,AT3G07840,AT3G03800,AT3G15280,AT1G35310,AT3G03650,AT1G74010,AT2G26450,AT5G06839,AT4G25010,AT1G74020,AT3G43120,AT5G64820,AT5G40860,AT1G33700,AT4G26260,AT3G16040,AT1G23730,AT3G42640,AT5G20710,AT3G57510,AT3G08560,AT3G10340,AT5G66740,AT5G46770,AT4G30850,AT4G26440,AT4G33820,AT1G71160,AT3G17060,AT3G06260,AT3G55870,AT3G54800,AT3G52810,AT3G26940,AT1G21140,AT3G45010,AT1G52240,AT1G61590,AT2G38250,AT5G06760,AT1G05580,AT2G34790,AT4G32500,AT4G39670,AT1G48590,AT3G29070,AT1G69350,AT1G22380,AT5G15190,AT2G26490,AT2G45750,AT4G29460,AT2G39590,AT1G18530,AT1G17540,AT5G56570,AT5G46940,AT1G13970,AT4G35420,AT3G20220,AT3G04700,AT3G52130,AT5G20230,AT4G35670,AT5G60330,AT2G43230,AT3G61230,AT4G24890,AT4G05570,AT5G44540,AT3G51000,AT3G52600,AT3G59530,AT3G30280,AT2G38080,AT5G39310,AT3G11990,AT3G55570,AT1G77530,AT1G11190,AT2G24450,AT2G05540,AT2G40850,AT1G44160,AT5G19600,AT3G53300,AT2G28180,AT1G25380,AT1G63180,AT4G26470,AT1G09610,AT1G31750,AT4G18920,AT1G09380,AT5G55970,AT2G03170,AT4G23660,AT3G56180,AT5G12960,AT4G12860,AT1G24520,AT1G24400,AT5G49270,AT1G29010,AT1G80850,AT2G21430,AT5G08480,AT1G03050,AT1G51490,AT1G04880,AT1G68540,AT3G20190,AT1G66400,AT3G23310,AT1G51420,AT3G17980,AT5G64790,AT3G42960,AT3G21320,AT4G26390,AT1G03850,AT5G14870,AT1G08670,AT3G18660,AT1G51250,AT1G28130,AT5G14670,AT1G72960,AT4G10960,AT3G52780,AT1G56630,AT1G50820,AT4G23560,AT5G62520,AT1G68290,AT1G75050,AT2G31100,AT3G24600,AT5G57690,AT2G38400,AT3G10320,AT1G72850,AT1G54940,AT5G58170,AT3G45280,AT4G03290,AT4G18150,AT1G79910,AT4G04930,AT1G19780,AT1G70640,AT3G15540,AT5G13350,AT3G44040,AT3G02030,AT3G26870,AT2G46950,AT5G66690,AT5G13670,AT3G58240,AT4G28150,AT3G55780,AT4G05120,AT2G44260,AT1G54870,AT3G50570,AT4G35180,AT5G42260,AT3G43660,AT5G15140,AT3G20450,AT5G65790,AT2G18470,AT5G43300,AT2G18610,AT1G72230,AT2G42140,AT1G61630,AT4G36490,AT5G42170,AT3G04690,AT5G09530,AT3G18810,AT3G13610,AT1G74870,AT5G07490,AT2G46210,AT5G40645,AT1G27270,AT3G28810,AT3G50220,AT1G13130,AT3G16920,AT5G46970,AT2G30690,AT3G55100,AT3G23840,AT1G06170,AT3G12860,AT4G30490,AT4G29880,AT5G17500,AT1G80440,AT1G11250,AT5G62750,AT3G25290,AT5G12180,AT5G36150,AT5G09570,AT2G03830,AT5G12950,AT5G36260,AT1G44478,AT5G49920,AT2G40670,AT4G20460,AT5G24790,AT4G25590,AT3G47965,AT5G13700,AT5G17590,AT1G79250,AT1G79860,AT2G38010,AT5G03210,AT5G26700,AT1G14860,AT2G45800,AT1G12030,AT5G43340,AT2G45610,AT1G32170,AT1G66870,AT3G13227,AT1G04890,AT2G19000,AT3G56230,AT1G64660,AT1G02900,AT2G38940,AT2G23510,AT3G22360,AT4G28500,AT1G07476,AT1G17030,AT1G51260,AT2G25380,AT4G08290,AT5G46230,AT1G59740,AT1G68750,AT1G61680,AT1G67920,AT3G14560,AT5G36040,AT5G66020,AT1G60410,AT4G29980,AT5G14760,AT1G23350,AT3G47440,AT1G72280,AT5G08540,AT2G03410,AT2G29940,AT1G68610,AT3G12660,AT2G33420,AT1G32780,AT1G12780,AT4G38190,AT1G19230,AT3G60780,AT2G38500,AT3G50120,AT1G48530,AT4G37840,AT4G37800,AT4G16220,AT1G04580,AT1G33770,AT5G38070,AT3G28210,AT1G79400,AT1G01980,AT2G31220,AT3G47350,AT1G01780,AT4G13450,AT2G25630,AT4G31370,AT1G05577,AT4G28700,AT1G64480,AT3G44140,AT1G04920,AT1G12070,AT5G07680,AT1G17710,AT1G78140,AT4G20420,AT4G22070,AT1G07750,AT1G07645,AT4G01470,AT5G50800,AT1G70630,AT4G01430,AT1G12600,AT5G62310,AT4G20680,AT3G46750,AT4G28090,AT1G20080,AT5G03590,AT5G61620,AT5G61120,AT3G25165,AT4G25780,AT1G75160,AT3G55990,AT2G16720,AT4G01160,AT4G21900,AT3G17225,AT5G44030,AT4G20780,AT3G21240,AT3G05930,AT1G44970,AT3G15450,AT4G27110,AT2G18530,AT2G46370,AT4G08550,AT2G15220,AT4G09950,AT5G52290,AT1G26820,AT2G41780,AT5G39870,AT5G20410,AT1G02520,AT5G13990,AT2G40000,AT1G69030,AT5G45340,AT4G39000,AT3G17320,AT2G41290,AT1G60240,AT4G37420,AT1G24600,AT3G25810,AT5G14890,AT1G30050,AT5G01060,AT5G43350,AT3G50510,AT4G35060,AT1G76240,AT5G37870,AT3G61680,AT5G09490,AT1G16760,AT5G24090,AT1G66810,AT4G30270,AT2G38490,AT4G39180,AT1G16510,AT3G42950,AT5G66170,AT1G23510,AT1G18990,AT1G74990,AT1G50990,AT3G51070,AT4G18190,AT1G03620,AT3G56360,AT4G31330,AT1G68200,AT4G01360,AT1G13950,AT2G45040,AT1G22090,AT2G44450,AT5G42340,AT3G51190,AT2G36180,AT4G37160,AT5G45950,AT5G13940,AT5G03690,AT5G55930,AT5G39400,AT5G60660,AT4G03220,AT2G23790,AT5G39610,AT4G21490,AT3G43860,AT1G30710,AT3G20530,AT2G45130,AT4G22790,AT4G30140,AT3G19310,AT2G05850,AT1G77650,AT2G17890,AT4G36640,AT2G19110,AT4G13240,AT1G31720,AT3G13065,AT3G01020,AT2G37090,AT5G22110,AT5G22200,AT1G59640,AT3G15500,AT3G24720,AT5G48140,AT1G28470,AT1G26610,AT1G36970,AT3G53720,AT2G28760,AT2G36890,AT1G09155,AT5G55890,AT3G19580,AT2G41860,AT2G22950,AT1G49290,AT5G20250,AT1G80160,AT3G45720,AT3G60710,AT3G13600,AT1G60570,AT3G48360,AT4G26830,AT1G09880,AT2G29460,AT5G10260,AT2G40460,AT3G48390,AT3G25280,AT4G27140,AT2G02990,AT4G22090,AT1G54540,AT2G47770,AT1G15350,AT5G56870,AT5G16490,AT4G34440,AT2G46140,AT3G11930,AT3G45970,AT2G40990,AT4G08560,AT2G02720,AT5G43330,AT2G13570,AT5G53510,AT2G42890,AT3G10410,AT3G43110,AT3G01490,AT1G02660,AT4G18550,AT5G54870,AT5G16440,AT5G36130,AT3G28150,AT1G70290,AT4G34750,AT2G35300,AT3G57390,AT3G07620,AT5G05640,AT3G13890,AT5G37170,AT5G54690,AT5G66650,AT2G41690,AT3G03760,AT1G44120,AT3G32902,AT3G04010,AT2G22820,AT2G33270,AT2G31270,AT3G12500,AT3G54700,AT1G51240,AT4G15250,AT3G57010,AT2G47270,AT1G71880,AT1G72200,AT2G13350,AT3G13900,AT3G61910,AT2G35090,AT3G26440,AT5G57380,AT1G28700,AT5G07000,AT3G14450,AT1G80820,AT1G23040,AT5G56510,AT2G39820,AT1G20440,AT5G01820,AT3G25930,AT3G03410,AT2G44420,AT3G01980,AT1G21670,AT4G34210,AT3G13380,AT2G16730,AT3G45560,AT5G16570,AT1G55420,AT1G07540,AT5G02580,AT5G63350,AT5G58160,AT5G61610,AT5G56110,AT5G25950,AT2G18700,AT1G17615,AT5G37090,AT4G08630,AT3G52080,AT1G25230,AT5G07010,AT3G10460,AT5G36720,AT1G22730,AT2G28110,AT5G16360,AT5G22680,AT2G20670,AT4G04980,AT2G47340,AT1G64060,AT4G03620,AT4G18580,AT1G06520,AT5G64690,AT2G21510,AT5G51950,AT1G70030,AT1G67540,AT4G12280,AT1G32450,AT5G52900,AT4G18780,AT5G50210,AT5G61340,AT3G05610,AT1G75450,AT1G55640,AT1G76210,AT1G28550,AT5G58460,AT1G08860,AT1G11740,AT3G55890,AT2G20340,AT1G70430,AT5G07060,AT2G27740,AT2G02010,AT5G02570,AT5G64080,AT4G12410,AT3G21700,AT4G23250,AT5G45150,AT1G54450,AT4G27450,AT4G28390,AT3G57900,AT5G16410,AT5G24860,AT3G57620,AT4G18860,AT1G74340,AT5G17300,AT4G24540,AT5G35110,AT5G19120,AT2G41440,AT3G45710,AT3G11910,AT5G04500,AT1G03660,AT1G27240,AT2G45290,AT3G07700,AT3G25600,AT5G15960,AT1G73630,AT1G71400,AT3G51130,AT1G34340,AT5G08730,AT4G29470,AT1G73510,AT2G31020,AT3G11740,AT1G23060,AT5G23190,AT2G23170,AT3G10740,AT5G01360,AT5G21940,AT4G15980,AT2G43620,AT3G46440,AT3G07120,AT1G70540,AT4G13880,AT1G17950,AT3G01630,AT1G08630,AT1G11170,AT3G05140,AT1G67070,AT4G22960,AT1G04980,AT5G07830,AT3G07350,AT5G48950,AT1G20150,AT2G01330,AT5G46240,AT1G29200,AT1G16850,AT4G05130,AT3G18350,AT5G05850,AT2G29470,AT5G63060,AT1G12080,AT5G02540,AT3G49790,AT3G21230,AT5G65110,AT3G27210,AT1G52450,AT3G19930,AT3G58370,AT1G10070,AT5G38440,AT3G11050,AT2G25460,AT2G26530,AT5G16460,AT3G07070,AT1G44542,AT5G46640,AT1G22640,AT1G15470,AT4G30500,AT1G33800,AT1G29860,AT5G17180,AT2G25900,AT3G19680,AT3G10470,AT4G24430,AT1G10060,AT3G06490,AT5G04250,AT4G02380,AT4G16190,AT3G48010,AT4G30290,AT3G25730,AT1G18880,AT5G17950,AT5G11120,AT4G34050,AT3G11440,AT5G55700,AT5G06930,AT5G11440,AT5G54010,AT2G38240,AT5G25880,AT5G49900,AT3G15900,AT5G65870,AT2G39300,AT1G66460,AT1G69850,AT4G19080,AT1G77980,AT2G16980,AT5G01180,AT5G02200,AT5G22920,AT2G37010,AT3G24620,AT2G29440,AT3G16210,AT5G23890,AT3G26790,AT5G15430,AT1G58190,AT5G14480,AT2G30650,AT2G44220,AT3G03510,AT3G20940,AT2G16030,AT2G32340,AT3G50770,AT1G13890,AT3G60540,AT3G58260,AT4G11760,AT1G76890,AT4G16600,AT5G01920,AT1G22240,AT3G23380,AT3G18610,AT1G20680,AT1G63200,AT1G23390,AT5G46990,AT2G39350,AT4G24640,AT5G03820,AT5G57320,AT3G45500,AT3G60330,AT5G38450,AT1G23200,AT3G58480,AT1G03070,AT5G40620,AT5G13150,AT5G57880,AT3G16340,AT1G23540,AT2G16360,AT3G58960,AT4G07960,AT1G63220,AT1G01310,AT1G24822,AT1G64320,AT3G05820,AT1G49270,AT1G80920,AT5G41450,AT2G37040,AT4G22640,AT5G62960,AT5G14070,AT3G13229,AT2G38340,AT1G71110,AT3G57330,AT5G39820,AT3G06830,AT2G42940,AT5G54080,AT2G40680,AT2G39060,AT2G05330,AT5G03795,AT4G27350,AT3G03900,AT2G34870,AT1G14870,AT1G49740,AT2G32150,AT3G62100,AT4G32770,AT1G07330,AT2G25510,AT4G30810,AT5G51460,AT1G26590,AT5G44980,AT2G14630,AT3G17660,AT3G07830,AT3G16380,AT3G62950,AT4G29610,AT4G05270,AT2G43510,AT1G71470,AT1G22400,AT3G08810,AT1G10680,AT4G34860,AT5G13970,AT2G33690,AT5G17200,AT1G28330,AT4G38310,AT3G62730,AT4G19420,AT5G56980,AT5G49180,AT3G54490,AT1G04090,AT1G20130,AT2G41210,AT3G62640,AT3G51470,AT1G78720,AT3G14820,AT4G12530,AT5G55090,AT1G33270,AT2G19010,AT2G33460,AT1G67623,AT5G37940,AT2G43080,AT5G12000,AT5G11420,AT1G71890,AT3G44240,AT3G55840,AT1G26480,AT3G52010,AT5G47050,AT4G27850,AT4G35770,AT1G24540,AT1G54620,AT5G47000,AT2G23620,AT1G03920,AT3G24503,AT4G23920,AT3G01530,AT2G44230,AT4G13630,AT4G05540,AT3G01620,AT3G14850,AT2G22180,AT2G37980,AT1G02510,AT3G06080,AT5G48570,AT5G15600,AT1G23760,AT2G30630,AT1G21070,AT2G03000,AT1G11080,AT1G13910,AT1G21750,AT2G02710,AT5G01100,AT1G04700,AT2G24610,AT1G51030,AT1G28710,AT1G74000,AT5G56550,AT5G58050,AT4G35610,AT1G09030,AT5G38710,AT4G29190,AT4G12430,AT5G16370,AT3G25220,AT2G03210,AT2G10970,AT3G26510,AT1G59722,AT4G24580,AT5G52460,AT4G05020,AT5G03960,AT2G45220,AT4G06746,AT2G25890,AT2G35420,AT5G46050,AT3G15440,AT5G03250,AT1G61470,AT1G68020,AT3G62040,AT4G04020,AT1G22990,AT3G15630,AT4G04760,AT4G37780,AT2G29980,AT4G30110,AT4G15120,AT1G02230,AT3G16580,AT1G71170,AT2G27930,AT1G74960,AT4G37520,AT1G48740,AT1G78000,AT1G50880,AT2G26850,AT1G67980,AT5G14980,AT1G48800,AT3G61450,AT2G30290,AT2G33870,AT2G20700,AT1G58210,AT1G47270,AT3G10525,AT5G58310,AT1G77310,AT1G75110,AT2G02810,AT3G11040,AT5G17330,AT1G42980,AT1G69560,AT2G10450,AT3G43630,AT4G38570,AT2G41970,AT2G20320,AT4G15760,AT5G57020,AT1G09210,AT4G32480,AT2G37610,AT1G77590,AT1G25240,AT1G29500,AT5G47220,AT1G62290,AT1G60300,AT1G29510,AT2G39400,AT5G41130,AT3G26880,AT2G31830,AT2G45560,AT5G35090,AT4G33740,AT2G28400,AT1G49330,AT4G30470,AT4G16480,AT5G61590,AT5G59880,AT5G49450,AT1G23010,AT5G57240,AT2G39420,AT1G68440,AT5G41530,AT4G21780,AT5G48320,AT5G07440,AT3G60570,AT3G62930,AT5G17470,AT2G30600,AT4G33230,AT4G36850,AT2G31130,AT3G49560,AT4G38650,AT1G29830,AT1G70170,AT1G26780,AT5G27600,AT4G27970,AT1G17990,AT5G60640,AT2G21480,AT3G01700,AT4G23580,AT5G05070,AT4G38390,AT1G49490,AT1G47480,AT3G29035,AT1G07473,AT3G05580,AT5G57810,AT5G22020,AT2G35730,AT5G24650,AT4G04360,AT1G64630,AT4G10910,AT5G60080,AT2G36880,AT2G21720,AT3G19150,AT1G70220,AT1G78990,AT1G23560,AT3G07960,AT3G24610,AT1G03810,AT1G06970,AT1G65480,AT1G70020,AT4G34060,AT1G03980,AT1G66360,AT2G01580,AT1G29460,AT3G54880,AT2G37670,AT5G46080,AT1G26800,AT4G24230,AT5G41080,AT2G14830,AT2G05910,AT1G71810,AT5G54780,AT5G50060,AT5G54030,AT4G10010,AT4G13930,AT2G19800,AT4G27810,AT2G32930,AT3G04870,AT4G13990,AT5G62290,AT1G69570,AT5G18130,AT4G13330,AT2G42480,AT4G15100,AT4G19690,AT1G62440,AT2G46360,AT1G03090,AT1G78940,AT3G22020,AT4G16745,AT3G03820,AT2G24580,AT1G15670,AT1G56220,AT5G48430,AT4G33750,AT5G23270,AT1G65560,AT2G16760,AT5G41800,AT5G50120,AT5G64240,AT1G11260,AT1G23880,AT1G03390,AT3G47950,AT1G10620,AT1G28380,AT3G61260,AT1G08260,AT1G12010,AT5G53780,AT4G21380,AT2G33830,AT1G77760,AT3G51860,AT3G53550,AT5G55320,AT1G16290,AT5G51580,AT1G78230,AT1G07340,AT1G33170,AT3G28870,AT1G03340,AT5G37690,AT1G25270,AT5G53520,AT1G66760,AT5G51720,AT3G48690,AT5G46060,AT2G43010,AT3G10580,AT3G60140,AT4G00310,AT1G21740,AT2G45400,AT1G63950,AT2G34340,AT5G67550,AT5G51250,AT3G55190,AT1G02400,AT5G59490,AT1G67640,AT1G05330,AT5G63070,AT2G32210,AT5G58390,AT2G16430,AT5G60250,AT3G24700,AT4G33560,AT1G32220,AT5G04160,AT5G45820,AT5G44120,AT2G43710,AT5G02720,AT2G43520,AT5G02270,AT5G24640,AT4G03510,AT4G25390,AT2G31030,AT1G32030,AT5G09520,AT4G00750,AT3G04360,AT2G44080,AT5G45810,AT3G58290,AT5G03810,AT2G20800,AT2G32470,AT3G45480,AT5G17050,AT3G50130,AT4G31870,AT1G66290,AT5G45840,AT2G42570,AT1G37020,AT1G19540,AT3G57720,AT1G56030,AT1G77380,AT1G61290,AT1G01400,AT3G61760,AT1G29480,AT5G21170,AT2G26940,AT4G27410,AT5G18020,AT2G22510,AT3G03460,AT3G43920,AT1G76590,AT4G25330,AT3G45060,AT2G45430,AT4G23500,AT4G01180,AT4G13980,AT3G04070,AT2G48130,AT1G60250,AT5G22260,AT1G35910,AT1G49520,AT5G63560,AT4G24960,AT1G58180,AT5G27260,AT4G34970,AT5G63190,AT5G26220,AT5G24080,AT3G52740,AT5G03760,AT5G59080,AT5G02150,AT1G75520,AT3G22600,AT1G09980,AT3G52720,AT1G77160,AT3G20200,AT1G74460,AT5G62240,AT3G56960,AT4G13080,AT5G09780,AT3G53310,AT3G48340,AT3G54340,AT1G15640,AT1G34070,AT3G13228,AT4G30870,AT1G65620,AT5G67390,AT5G39420,AT1G34640,AT5G63450,AT3G10100,AT1G65590,AT2G47160,AT4G11360,AT1G17840,AT1G08920,AT2G40940,AT1G61810,AT5G37670,AT1G62270,AT3G03080,AT5G12890,AT1G55510,AT5G41780,AT4G34510,AT4G28790,AT3G17010,AT4G39360,AT1G55810,AT4G20320,AT2G27880,AT1G16060,AT5G41900,AT2G14900,AT3G24230,AT2G39570,AT3G49055,AT2G16005,AT1G19660,AT3G03840,AT2G31760,AT1G74670,AT5G42500,AT5G59280,AT4G27790,AT4G28930,AT4G20840,AT5G24420,AT4G01140,AT1G13245,AT1G73260,AT5G02430,AT1G13590,AT3G11020,AT5G40570,AT5G53650,AT5G39110,AT3G47480,AT1G68110,AT3G54140,AT2G17440,AT3G13910,AT1G48960,AT2G02300,AT1G66170,AT4G30420,AT1G07050,AT1G17430,AT2G05410,AT5G38740,AT5G42630,AT5G57000,AT5G01640,AT1G80240,AT2G44430,AT4G21990,AT1G80180,AT5G54190,AT1G62280,AT5G55770,AT3G05165,AT4G34030,AT5G15040,AT1G07090,AT2G46980,AT5G40220,AT2G18950,AT3G52870,AT1G02580,AT4G09090,AT3G12320,AT5G50360,AT2G30890,AT2G30070,AT2G37180,AT4G18510,AT5G18010,AT3G05920 ALVES-FERREIRA_SPL/NZZ_DN Down-regulated genes -spl/nzz (TableS1 PubmedID:17905860) AT2G21590,AT3G60650,AT3G57070,AT5G65210,AT1G05020,AT2G28120,AT4G39580,AT1G02450,AT5G07570,AT2G21640,AT1G70390,AT1G72460,AT1G05340,AT4G36740,AT4G26200,AT5G57670,AT1G44608,AT3G22730,AT2G40450,AT1G19394,AT1G17020,AT4G24130,AT4G31970,AT2G46680,AT3G18900,AT5G18290,AT3G21870,AT4G35380,AT3G23030,AT2G38970,AT4G27310,AT4G37220,AT3G26030,AT1G69180,AT2G25625,AT3G14060,AT2G18550,AT5G22390,AT4G02860,AT5G13170,AT2G45310,AT2G37640,AT5G39180,AT3G22370,AT2G32750,AT4G01540,AT1G08470,AT5G63590,AT3G02380,AT1G66250,AT2G35930,AT1G08990,AT4G15750,AT1G08940,AT5G55570,AT4G03440,AT4G36730,AT3G16710,AT2G42950,AT3G63350,AT5G61800,AT1G04770,AT5G24210,AT1G03905,AT1G65170,AT2G16620,AT2G23910,AT2G01020,AT1G17190,AT5G14300,AT1G72060,AT1G74490,AT5G58750,AT5G59310,AT1G19190,AT5G43620,AT2G40370,AT2G36110,AT2G04750,AT1G20510,AT1G80420,AT5G44410,AT1G25510,AT1G51440,AT3G51240,AT1G08400,AT3G11480,AT1G78570,AT1G11870,AT2G31865,AT5G33355,AT1G77340,AT3G46660,AT3G46080,AT4G12140,AT2G17690,AT2G26910,AT5G06980,AT5G26120,AT3G26120,AT3G20660,AT4G36430,AT5G38120,AT2G02930,AT5G60010,AT4G08710,AT2G31945,AT5G62210,AT1G65990,AT1G74100,AT4G39800,AT3G13790,AT1G26680,AT5G56100,AT3G26430,AT5G05270,AT1G35260,AT1G50610,AT1G01120,AT5G39580,AT4G22880,AT1G36940,AT4G09820,AT1G41830,AT5G13870,AT5G13930,AT3G16120,AT5G54400,AT1G36160,AT2G45970,AT4G24120,AT2G18150,AT1G33055,AT3G29590,AT3G62440,AT2G15020,AT4G14130,AT1G10640,AT3G19055,AT1G02930,AT2G42830,AT3G30210,AT1G12170,AT1G53035,AT4G37250,AT3G08860,AT4G15610,AT3G17580,AT4G24040,AT5G53500,AT3G16150,AT5G17220,AT5G40690,AT3G17790,AT2G42990,AT3G59270,AT4G31020,AT1G62180,AT5G50260,AT3G16420,AT4G23870,AT3G57520,AT1G15330,AT4G10240,AT2G25230,AT1G65880,AT1G19670,AT5G48880,AT5G07930,AT3G58780,AT2G47360,AT5G53210,AT1G72260,AT3G07320,AT1G09970,AT5G46040,AT5G16700,AT1G32375,AT5G08640,AT2G25880,AT4G28780,AT5G54700,AT3G62430,AT5G41400,AT1G76480,AT1G14370,AT5G51970,AT5G54970,AT4G04610,AT1G05770,AT1G70370,AT4G18090,AT5G07990,AT5G38800,AT3G46770,AT4G38000,AT5G60740,AT3G51660,AT1G69490,AT1G54955,AT1G62935,AT1G03106,AT5G37860,AT3G25670,AT3G22640,AT5G59320,AT3G56920,AT2G05530,AT3G02590,AT1G01530,AT5G41630,AT3G60920,AT3G10040,AT3G15720,AT5G43580,AT1G15040,AT5G65330,AT3G55605,AT2G45210,AT3G04720,AT4G19380,AT3G01080,AT3G61490,AT4G26280,AT4G08770,AT5G14360,AT5G67070,AT1G16140,AT5G39240,AT4G13770,AT1G65850,AT2G24030,AT1G63140,AT5G03545,AT4G26030,AT5G44970,AT5G20650,AT4G14630,AT2G03090,AT2G29200,AT3G44300,AT4G14040,AT3G49160,AT3G19710,AT3G49270,AT1G68620,AT3G19410,AT5G52390,AT3G48640,AT1G30700,AT4G11650,AT5G43410,AT1G17745,AT3G49120,AT5G10100,AT4G31950,AT5G44140,AT4G16590,AT5G48510,AT1G27030,AT3G58990,AT1G60450,AT2G41090,AT5G43570,AT1G80050,AT5G01910,AT4G36700,AT2G36730,AT2G25240,AT1G53010,AT1G02360,AT2G34270,AT3G17500,AT5G63600,AT2G46970,AT4G03330,AT4G23170,AT3G05730,AT1G04150,AT2G46650,AT1G80130,AT5G45970,AT3G61820,AT3G17830,AT1G31580,AT3G19140,AT1G21250,AT4G30250,AT1G16410,AT4G01970,AT4G25560,AT2G26400,AT3G23110,AT5G49250,AT1G18980,AT5G42590,AT4G26150,AT3G55240,AT1G13470,AT5G10760,AT2G21650,AT4G23600,AT5G60880,AT3G03190,AT5G40430,AT1G14880,AT1G15890,AT4G15200,AT4G18290,AT5G53320,AT5G18160,AT3G25190,AT3G51910,AT1G44085,AT1G43800,AT5G39520,AT4G30520,AT1G61800,AT1G16950,AT5G04160 ALVES-FERREIRA_MS1-WHOLE-INFLORESCENCE_UP Up-regulated genes -ms1 (whole inflorescence) (TableS1 PubmedID:17905860) AT1G11250,AT1G29010,AT3G62710,AT1G75910,AT3G01270,AT1G30020,AT1G26720,AT3G01240,AT3G28820,AT3G03430,AT1G23240,AT3G07850,AT2G47030,AT3G07820,AT2G04020,AT3G28750,AT5G07560,AT5G07600,AT5G45880,AT3G51590,AT5G60500,AT3G26860,AT4G13560,AT3G28830,AT5G07410,AT1G02790,AT2G19070,AT1G75940,AT1G26710,AT1G28430,AT1G76470,AT5G44400,AT2G32890,AT1G56440,AT2G07560,AT2G45610,AT2G02140,AT3G52160,AT5G07530,AT3G13400,AT1G13140,AT5G07520,AT3G28780,AT1G48020,AT1G54860,AT5G07550,AT1G23840,AT2G31980,AT1G13150,AT4G03290,AT3G28810,AT3G28840,AT5G07510,AT1G13670,AT2G16750,AT1G55570,AT5G44300,AT2G21490,AT1G52680,AT2G47040,AT3G21970,AT3G17060,AT2G46860,AT3G62230,AT1G55560,AT2G03200,AT1G23610,AT1G15415,AT5G24640,AT1G23520,AT1G22760,AT3G11430,AT4G37900,AT2G24450,AT3G10890,AT5G53820,AT2G07040,AT3G19090,AT1G23350,AT2G22950,AT1G75920,AT4G02250,AT5G60510,AT1G74540,AT1G30350,AT2G47050,AT1G51410,AT3G01250,AT4G25950,AT1G35490,AT3G08560,AT3G05960,AT5G46200,AT3G01230,AT5G07430,AT1G11765,AT1G06990,AT1G70980,AT2G32460,AT1G29140,AT1G14420,AT4G29340,AT5G48210,AT1G04450,AT1G16110,AT5G15110,AT5G17480,AT1G79910,AT3G20530,AT2G19770,AT3G43860,AT1G62450,AT1G78460,AT3G52620,AT3G21570,AT1G06280,AT3G03910,AT3G23030,AT2G03850,AT1G58120,AT5G39880,AT3G57690,AT3G20190,AT5G07420,AT1G67990,AT1G51490,AT5G49070,AT5G03620,AT1G71680,AT3G26125,AT4G27580,AT3G17760,AT5G62850,AT5G42260,AT2G45580,AT3G03760,AT2G36020,AT2G23900,AT1G47980,AT1G67550,AT3G03540,AT2G31500,AT4G28395,AT3G42640,AT5G39870,AT1G20120,AT4G17690,AT4G04930,AT5G52360,AT4G04460,AT3G53080,AT1G57550,AT1G80100,AT2G29790,AT3G15830,AT1G32250,AT3G09530,AT4G36600,AT4G02140,AT5G26060,AT1G63930,AT1G05510,AT3G46750,AT4G10010,AT4G21900,AT5G13580,AT3G07840,AT3G51070,AT3G46520,AT2G41970,AT4G29880,AT4G30140,AT2G18340,AT1G03050,AT2G02720,AT1G17540,AT5G66740,AT1G75870,AT2G26450,AT3G10460,AT5G37170,AT1G63060,AT5G65690,AT5G50830,AT3G23770,AT1G31750,AT3G58310,AT3G61230,AT5G23270,AT3G17630,AT2G03740,AT5G62750,AT3G54800,AT1G52570,AT5G62320,AT2G40990,AT1G54560,AT3G25165,AT5G24790,AT1G52240,AT5G16960,AT1G66210,AT1G09155,AT3G02810,AT1G01980,AT5G26700,AT1G35260,AT4G38590,AT2G41040,AT2G26410,AT3G17980,AT1G05580,AT2G16730,AT3G43120,AT1G26320,AT1G59740,AT5G42170,AT4G29250,AT3G13227,AT5G58170,AT1G34070,AT1G13970,AT5G14670,AT3G52810,AT3G04690,AT1G20130,AT5G04180,AT1G23690,AT1G21140,AT4G39110,AT5G16770,AT1G44160,AT2G37980,AT5G17590,AT1G80470,AT1G51240,AT1G23200,AT3G44040,AT4G35180,AT3G26880,AT3G61270,AT3G23380,AT5G12000,AT4G37840,AT4G38190,AT4G35060,AT2G19500,AT5G57690,AT1G18990,AT5G64790,AT1G74550,AT3G02480,AT1G24620,AT1G35310,AT3G51000,AT5G37810,AT2G30890,AT1G18280,AT1G79250,AT2G23800,AT1G13890,AT2G22180,AT1G07645,AT1G51250,AT4G22080,AT4G10850,AT2G47340,AT1G49290,AT5G38760,AT2G18470,AT3G55100,AT5G49920,AT1G23730,AT4G12860,AT1G11870,AT3G22360,AT4G25780,AT5G07490,AT4G32510,AT2G45800,AT1G72280,AT3G18360,AT2G39060,AT3G01530,AT3G43660,AT1G16760,AT2G20340,AT4G24580,AT4G26830,AT3G45280,AT3G21940,AT4G24640,AT5G50040,AT2G46210,AT4G29460,AT4G03620,AT2G24370,AT2G32750,AT3G05610,AT2G18420,AT2G23620,AT5G56640,AT3G26870,AT1G77980,AT5G19600,AT5G11440,AT4G01470,AT3G26120,AT1G07330,AT3G30280,AT1G23540,AT3G58480,AT1G80850,AT5G66690,AT5G15430,AT3G04700,AT2G30290,AT2G29460,AT4G19080,AT5G61610,AT1G32780,AT1G22990,AT1G18520,AT1G04890,AT1G79400,AT5G41080,AT2G33420,AT3G62640,AT2G19000,AT4G20680,AT1G48470,AT5G46990,AT5G03210,AT5G09550,AT3G11740,AT5G12180,AT4G26260,AT3G55870,AT3G19020,AT5G20410,AT3G01490,AT4G39670,AT3G13065,AT2G19010,AT2G17890,AT3G03840,AT1G58190,AT1G44478,AT3G20450,AT1G28550,AT3G15280,AT4G27110,AT5G60010,AT5G55170,AT1G50310,AT2G33270,AT4G25010,AT2G40850,AT5G10260,AT4G20780,AT4G13980,AT2G13350,AT4G31370,AT1G44542,AT3G20220,AT3G18810,AT3G47440,AT2G38970,AT3G03510,AT5G18010,AT4G24380,AT5G20230,AT1G09380,AT3G04360,AT3G56180,AT1G24520,AT3G24720,AT3G53300,AT5G07540,AT5G08540,AT5G66020,AT3G47965,AT2G20470,AT2G26490,AT3G12860,AT1G26610,AT1G22400,AT5G46650,AT2G13570,AT4G26470,AT4G33230,AT5G50800,AT4G10260,AT5G15040,AT3G21180,AT4G36490,AT3G07830,AT4G11760,AT5G54700,AT1G12070,AT2G24210,AT5G58460,AT5G03690,AT5G36260,AT1G62290,AT1G22380,AT2G40670,AT5G13150,AT1G68610,AT3G15510,AT2G39420,AT1G66850,AT5G18020,AT1G70640,AT1G01780,AT3G14560,AT1G76210,AT1G69030,AT5G11420,AT3G19310,AT1G16290,AT3G47340,AT1G09030,AT5G47000,AT4G23660,AT3G28917,AT2G46370,AT5G40645,AT3G58240,AT5G46970,AT5G08480,AT1G71770,AT2G28180,AT4G37800,AT3G21700,AT3G57620,AT2G46140,AT3G03080,AT1G17615,AT1G07476,AT1G58210,AT3G60710,AT2G43230,AT4G32500,AT1G71160,AT3G01620,AT3G13229,AT1G74000,AT1G13950,AT1G02510,AT2G23170,AT1G20080,AT1G23010,AT5G40860,AT2G44450,AT1G79860,AT5G57020,AT5G01060,AT5G43350,AT1G73630,AT1G54450,AT1G29460,AT1G29510,AT1G69570,AT2G33870,AT1G29500,AT5G38070,AT1G75160,AT1G30710,AT2G27670,AT3G60570,AT3G44240,AT3G16040,AT1G10680,AT1G79450,AT3G47870,AT1G25380,AT5G38440,AT4G34510,AT1G72460,AT1G80660,AT5G06760,AT1G10070,AT5G39400,AT4G12530,AT4G25040,AT1G61290,AT1G51420,AT3G52600,AT5G25880,AT1G23510,AT1G63180,AT1G01310,AT1G72850,AT4G18190,AT4G34970,AT1G22640,AT1G60240,AT5G57380,AT1G04880,AT5G62310,AT4G37420,AT5G48140,AT1G03980,AT4G22090,AT3G48010,AT1G64480,AT1G70720,AT2G41210,AT3G10320,AT2G41860,AT2G31270,AT3G19930,AT4G09950,AT4G13240,AT4G18920,AT5G63060,AT3G43630,AT1G77650,AT1G14860,AT5G46080,AT1G76240,AT5G39420,AT3G07620,AT3G03650,AT5G03590,AT3G24620,AT4G08630,AT2G33690,AT1G06250,AT4G37160,AT3G42850,AT5G41780,AT3G45010,AT3G22020,AT5G17200,AT1G03920,AT2G31100,AT4G27850,AT1G06970,AT3G03900,AT5G44120,AT2G25630,AT1G51260,AT5G37940,AT1G51440,AT5G65870,AT5G20710,AT2G16030,AT4G13990,AT1G02520,AT1G49270,AT1G30050,AT5G51030,AT3G52010,AT2G38940,AT1G19230,AT3G04620,AT5G02570,AT1G44120,AT5G46770,AT5G46940,AT5G61430,AT5G14890,AT5G49900,AT5G57810,AT4G35670,AT1G12080,AT3G42950,AT3G30210,AT1G18530,AT1G24400,AT3G03820,AT4G24430,AT1G17030,AT2G46360,AT2G02010,AT3G10740,AT4G39360,AT1G67980,AT3G15540,AT5G13670,AT3G28150,AT1G28700,AT5G36150,AT5G17470,AT4G22640,AT4G19620,AT1G53720,AT3G12660,AT2G21990,AT1G76890,AT1G61680,AT1G60410,AT5G15190,AT5G38450,AT2G44420,AT1G71880,AT4G16160,AT1G23060,AT2G44260,AT3G60920,AT1G59640,AT5G49270,AT1G64660,AT5G45950,AT2G05850,AT5G17500,AT2G45560,AT4G22070,AT5G16460,AT2G33460,AT2G21510,AT1G73220,AT4G04760,AT2G25890,AT4G34440,AT4G13080,AT5G45810,AT2G41290,AT1G11080,AT5G38710,AT5G14870,AT3G06490,AT5G46240,AT4G25590,AT1G54870,AT1G31720,AT2G24580,AT5G54570,AT3G60330,AT2G20320,AT4G04980,AT2G41570,AT2G19800,AT4G36640,AT2G38240,AT5G54010,AT4G05570,AT3G62100,AT5G54780,AT1G04920,AT4G29470,AT2G27930,AT1G32450,AT1G44085,AT3G06260,AT1G78000,AT4G15980,AT1G13130,AT3G15900,AT1G19540,AT1G15350,AT2G23970,AT4G22960,AT3G10100,AT1G71890,AT4G26440,AT4G38310,AT4G01140,AT3G06830,AT2G35300,AT1G67070,AT1G62280,AT4G21490,AT5G24090,AT3G05820,AT4G28930,AT2G29940,AT1G67540,AT3G01700,AT4G10910,AT5G63190,AT3G29070,AT3G52080,AT1G05577,AT5G58050,AT3G06080,AT3G01630,AT4G16745,AT2G02930,AT2G30690,AT5G50060,AT1G64320,AT4G15100,AT5G36040,AT5G22110,AT1G04700,AT5G08730,AT4G18550,AT1G78140,AT1G66360,AT5G13990,AT2G25460,AT2G29440,AT5G38800,AT4G34750,AT3G01020,AT1G20150,AT3G21320,AT1G80240,AT3G16340,AT4G25560,AT3G07350,AT1G06520,AT2G47270,AT4G28090,AT2G03410,AT4G36850,AT2G21480,AT5G22920,AT5G43300,AT4G08550,AT1G22100,AT4G08290,AT3G02380,AT5G45340,AT4G18150,AT5G07680,AT2G32340,AT1G26680,AT3G11910,AT1G05290,AT1G67810,AT3G10525,AT5G55930,AT3G25290,AT1G67640,AT1G23880,AT3G56960,AT5G61120,AT3G59270,AT2G01330,AT2G44220,AT4G13450,AT5G24860,AT1G33770,AT4G15250,AT4G05120,AT3G11930,AT2G10450,AT2G21720,AT2G24610,AT3G45060,AT3G17660,AT4G02380,AT4G23920,AT2G39300,AT5G22680,AT5G15960,AT4G00310,AT2G31830,AT1G70630,AT1G74490,AT4G15760,AT1G80440,AT1G69560,AT4G30850,AT1G50610,AT5G02200,AT2G16980,AT1G74340,AT3G13900,AT4G26030,AT3G10340,AT2G37040,AT1G69850,AT4G26390,AT3G62040,AT5G45820,AT1G07540,AT2G47770,AT4G27350,AT5G20250,AT3G24503,AT3G48640,AT1G68750,AT5G43620,AT4G15120,AT3G47350,AT1G74020,AT1G26780,AT2G20670,AT1G24822,AT1G54955,AT4G30110,AT5G57320,AT2G29980,AT5G16440,AT3G57520,AT5G05850,AT5G40220,AT5G51460,AT5G56550,AT5G64240,AT3G50120,AT2G20700,AT1G26480,AT1G22240,AT4G34860,AT4G30420,AT1G20440,AT2G30630,AT2G38400,AT4G30170,AT4G38570,AT1G61590,AT4G25390,AT1G22730,AT3G56360,AT4G21380,AT2G04750,AT5G04250,AT5G15600,AT1G23560,AT4G19690,AT4G23250,AT5G06980,AT1G04090,AT4G32770,AT1G23390,AT3G01980,AT3G58370,AT4G30810,AT2G31020,AT1G03070,AT2G15020,AT1G78940,AT4G20460,AT5G62960,AT3G61910,AT1G76480,AT1G70430,AT1G26820,AT5G03250,AT3G20200,AT2G23790,AT3G50220,AT1G33055,AT5G64080,AT1G66290,AT5G17050,AT2G35730,AT5G58310,AT1G12600,AT1G63220,AT1G54620,AT1G28470,AT5G01920,AT2G18700,AT4G29610,AT4G03220,AT1G11170,AT1G37020,AT3G12320,AT2G35420,AT5G12960,AT3G57330,AT5G57240,AT5G41800,AT3G04010,AT5G54870,AT4G10960,AT2G37610,AT1G61070,AT4G27310,AT5G03960,AT2G37640,AT1G66400,AT5G35110,AT3G27210,AT4G30270,AT3G18350,AT1G47270,AT2G31130,AT5G63070,AT2G03830,AT3G05140,AT5G61590,AT1G50880,AT5G55770,AT5G67550,AT4G01230,AT2G05540,AT5G19120,AT4G30500,AT2G37010,AT1G33270,AT3G46440,AT3G17580,AT2G37180,AT5G02150,AT4G28150,AT3G56920,AT2G37750,AT2G38080,AT1G08670,AT5G09480,AT3G43110,AT1G21070,AT2G16360,AT5G37690,AT3G07700,AT1G70020,AT3G10470,AT5G14360,AT3G49560,AT5G41130,AT4G33740,AT1G29860,AT1G14880,AT4G24540,AT1G67623,AT2G42890,AT5G36720,AT2G26850,AT1G50820,AT3G24600,AT1G15470,AT1G49490,AT3G20940,AT3G55890,AT5G63450,AT1G19660,AT1G75520,AT5G55700,AT5G43330,AT1G26800,AT2G38010,AT5G02720,AT5G02580,AT1G53010,AT2G03210,AT4G39180,AT1G32170,AT1G28710,AT3G25810,AT1G64670,AT1G64630,AT5G64820,AT1G22130,AT1G74960,AT3G15400,AT3G07120,AT3G51470,AT3G52870,AT3G26790,AT3G05730,AT5G12950,AT4G30290,AT5G10760,AT1G49740,AT2G43080,AT2G44230,AT3G16380,AT1G08860,AT3G48360,AT1G11190,AT2G39820,AT3G07960,AT4G28700,AT5G07440,AT3G57510,AT3G55780,AT1G22110,AT5G49450,AT1G26590,AT3G13610,AT4G16190,AT2G41090,AT1G48590,AT2G40680,AT1G31580,AT3G49790,AT4G30490,AT5G12890,AT3G51130,AT4G27140,AT1G48740,AT3G25280,AT1G64060,AT3G19580,AT5G59280,AT5G42340,AT1G71810,AT4G32480,AT1G61800,AT2G43710,AT5G58390,AT2G33830,AT1G07473,AT2G21650,AT1G23800,AT5G17950,AT1G16510,AT2G28400,AT4G33750,AT2G46950,AT1G78230,AT3G60780,AT1G04980,AT3G13380,AT1G34640,AT1G29200,AT2G42140,AT1G74870,AT5G61340,AT3G05580,AT5G24080,AT4G13630,AT2G34340,AT3G25190,AT1G75050,AT2G45130,AT4G25330,AT5G66650,AT5G58160,AT1G21670,AT2G34790,AT4G33820,AT5G39820,AT3G28210,AT1G16850,AT5G39310,AT1G19780,AT3G13890,AT1G08630,AT5G60660,AT3G52740,AT3G54880,AT4G30870,AT5G14980,AT5G05270,AT5G65110,AT5G48950,AT3G21240,AT2G38490,AT2G30650,AT3G16920,AT3G62950,AT5G56870,AT2G45400,AT5G58750,AT4G13930,AT1G02930,AT3G23310,AT5G06330,AT5G48880,AT4G31020,AT3G14820,AT3G13600,AT1G34340,AT2G19110,AT3G14850,AT5G05070,AT1G33170,AT5G04500,AT2G16430,AT4G01180,AT5G59310,AT1G48530,AT1G25240,AT5G48510,AT5G02270,AT3G10580,AT3G47480,AT1G52450,AT2G25380,AT5G57880,AT5G50780,AT2G37670,AT3G07070,AT1G05020,AT2G42830,AT2G02810,AT4G21780,AT4G29190,AT4G16480,AT5G14070,AT3G01080,AT2G43620,AT2G43520,AT4G12430,AT4G23560,AT3G16420,AT3G25930,AT1G66460,AT2G29200,AT5G36130,AT1G68110,AT1G77590,AT4G18580,AT1G66250,AT1G49520,AT1G66170,AT3G54700,AT5G01100,AT5G42630,AT1G21250,AT1G65620,AT3G24700,AT3G45970,AT5G17180,AT4G38650,AT4G35380,AT3G57390,AT1G50990,AT1G74010,AT1G18880,AT1G65480,AT4G28500,AT3G58780,AT3G57010,AT4G27790,AT1G10640,AT4G28790,AT5G40620,AT1G11260,AT5G54690,AT3G61490,AT2G15360,AT4G05130,AT5G56510,AT3G62430,AT1G33700,AT5G09490,AT5G14760,AT1G77310,AT2G02300,AT1G69350,AT4G14780,AT4G13330,AT1G12780,AT3G16150,AT3G54530,AT2G40450,AT2G36880,AT1G09980,AT5G63350,AT1G25230,AT5G41900,AT3G13790,AT1G10060,AT1G29830,AT1G71170,AT2G41780,AT1G03660,AT1G15670,AT3G43920,AT2G37280,AT5G53520,AT1G60450,AT5G60740,AT3G29035,AT5G06839,AT1G07090,AT1G09210,AT4G08560,AT1G28330,AT1G74670,AT3G13228,AT1G55640,AT5G07570,AT3G02590,AT5G40260,AT4G37220,AT4G35770,AT3G03410,AT5G13350,AT3G17225,AT1G33430,AT4G09820,AT1G32220,AT3G53550,AT5G53210,AT4G35610,AT1G74990,AT4G14130,AT2G47360,AT3G11990,AT2G32930,AT1G01120,AT5G50120,AT1G02660,AT2G14830,AT5G16410,AT1G03850,AT4G30470,AT4G38000,AT1G62270,AT1G80420,AT5G53190,AT1G56630,AT5G06930,AT1G68290,AT2G25240,AT1G15330,AT3G14450,AT3G07320,AT2G31220,AT4G31330,AT3G25600,AT3G15450,AT1G69180,AT1G04580,AT1G23040,AT1G71400,AT5G52390,AT1G05770,AT5G60640,AT5G45150,AT1G80820,AT3G61260,AT1G04150,AT1G61470,AT4G23170,AT4G12410,AT3G15500,AT1G33800,AT2G01020,AT2G46680,AT5G21940,AT1G09610,AT4G01160,AT5G14480,AT4G36730,AT3G24230,AT4G01360,AT1G13245,AT2G32150,AT3G53720,AT5G01820,AT3G55990,AT5G38120,AT3G03460,AT5G46950,AT5G46640,AT2G44080,AT3G54340,AT1G65850,AT3G57720,AT3G11040,AT5G59845,AT5G51250,AT5G27600,AT3G61760,AT4G03330,AT5G37670,AT3G03800,AT2G30600,AT1G11740,AT2G43010,AT2G45040,AT4G34050,AT3G24610,AT5G44140,AT2G43510,AT1G09970,AT3G26030,AT5G56980,AT5G53780,AT1G10620,AT2G42570,AT1G17840,AT1G70220,AT5G39240,AT5G21170,AT1G48800,AT3G18660,AT5G51720,AT1G80920,AT5G38740,AT3G50130,AT2G22820,AT4G07960,AT5G66170,AT5G17300,AT5G09570,AT4G34030,AT5G24210,AT5G35090 ALVES-FERREIRA_MS1-WHOLE-INFLORESCENCE_DN Down-regulated genes -ms1 (whole inflorescence) (TableS1 PubmedID:17905860) AT5G51580,AT1G07750,AT1G06260,AT5G46050,AT1G80130,AT4G13770,AT1G60570,AT3G15720,AT1G15640,AT4G27970,AT5G22020,AT1G68020,AT2G32210,AT2G25900,AT3G13910,AT1G07340,AT3G05165,AT5G16570,AT5G59080,AT3G11050,AT2G38340,AT1G66870,AT5G46060,AT1G12170,AT5G65210,AT1G70290,AT2G05530,AT5G33355,AT4G30520,AT2G26530,AT1G03090,AT4G20320,AT2G27740,AT3G26940,AT4G04360,AT5G13940,AT3G13390,AT1G65880,AT3G29590,AT3G61820,AT1G74100,AT4G27450,AT1G66810,AT4G36700,AT1G25270,AT1G80160,AT2G28680,AT4G10240,AT3G61680,AT1G07050,AT1G05340,AT1G21750,AT4G19420,AT5G54970,AT5G07010,AT3G23840,AT2G40460,AT1G61810,AT4G06746,AT5G51970,AT5G62210,AT2G38500,AT3G45720,AT5G24650,AT1G72060,AT2G45310,AT3G11440,AT5G49250,AT3G19410,AT1G02450,AT5G13930,AT4G31870,AT3G02030,AT4G04020,AT5G57000,AT2G25880,AT1G68440,AT3G17790,AT2G34270,AT1G17710,AT5G40570,AT1G56220,AT1G06170,AT3G08810,AT3G61810,AT3G16120,AT4G05540,AT3G45710,AT3G50770,AT1G02230,AT2G35090,AT1G27240,AT3G11480,AT1G32375,AT1G28130,AT1G14870,AT3G17830,AT1G72960,AT1G14370,AT4G27810,AT5G16490,AT3G46770,AT2G46650,AT5G59320,AT5G54190,AT4G18510,AT1G20510,AT3G26510,AT2G16720,AT4G24040,AT2G14900,AT4G04610,AT1G24540,AT4G39000,AT4G27410,AT1G41830,AT3G21230,AT2G28760,AT5G02430,AT4G05020,AT3G51860,AT2G02990,AT1G55810,AT4G03440,AT5G65790,AT3G57900,AT5G62520,AT2G23910,AT3G10410,AT4G03510,AT3G15630,AT3G14060,AT4G28390,AT4G11360,AT2G37090,AT4G08770,AT2G31030,AT1G19670,AT3G23110,AT1G15890,AT3G17320,AT2G28120,AT4G26200,AT1G70540,AT3G25220,AT3G19680,AT3G51190,AT5G48430,AT2G46980,AT5G08640,AT1G76590,AT5G50360,AT2G17440,AT4G37520,AT4G36350,AT5G55970,AT5G54080,AT1G61630,AT4G01430,AT1G78990,AT2G40000,AT4G37780,AT5G60880,AT1G80050,AT1G70390,AT3G19150,AT5G16370,AT4G01970,AT5G03760,AT1G77760,AT3G18900,AT1G16060,AT4G39800,AT1G13470,AT1G62180,AT4G01540,AT2G35930,AT2G05910,AT5G17220,AT2G34870,AT5G50210,AT1G28375,AT5G49180,AT4G15750,AT1G62440,AT1G55510,AT1G72230,AT4G12280,AT5G09780,AT1G19394,AT5G20650,AT2G44430,AT5G61320,AT3G17010,AT1G77380,AT4G13880,AT5G55590,AT4G18780,AT5G24420,AT5G55570,AT2G47160,AT5G48570,AT4G23500,AT2G36890,AT1G02580,AT2G31760,AT4G26280,AT5G09520,AT1G68620,AT5G22200,AT3G55240,AT4G09090,AT1G55420,AT2G28110,AT4G30250,AT4G16590,AT3G52720,AT2G45290,AT1G17990,AT5G09500,AT1G58180,AT5G61620,AT5G53500,AT3G55190,AT3G54490,AT1G70370,AT5G44700,AT5G16360,AT5G53650,AT3G50570,AT1G70030,AT5G64690,AT5G57670,AT5G01360,AT5G60330,AT1G27030,AT1G79800,AT1G66760,AT2G41440,AT1G54940,AT1G08400,AT5G18130,AT3G21870,AT3G51660,AT2G21590,AT4G14040,AT1G78570,AT3G50970,AT1G75110,AT5G25950,AT5G67070,AT3G62730,AT1G80180,AT4G22790,AT5G13870,AT2G46970,AT1G77160,AT2G03090,AT5G47220,AT5G08030,AT1G17430,AT5G07000,AT1G68200,AT5G07990,AT3G46660,AT1G03106,AT2G39570,AT3G15440,AT4G36740,AT5G01910,AT2G39400,AT4G19380,AT3G22640,AT4G24230,AT1G72260,AT1G56030,AT2G14630,AT1G53035,AT1G36940,AT3G58260,AT4G38390,AT3G49270,AT2G31945,AT1G65170,AT1G44608,AT3G62930,AT2G36730,AT3G55605,AT2G41690,AT1G32030,AT2G27880,AT2G15220,AT1G17745,AT5G43410,AT1G63200,AT3G52780,AT3G51910,AT5G47050,AT1G15040,AT1G17020,AT4G24120,AT5G37860,AT4G23600,AT4G15200,AT1G01530,AT1G13590,AT1G03905,AT3G47950,AT5G44030,AT3G48390,AT1G56360,AT2G40370,AT5G54400,AT2G42950,AT1G08260,AT2G21640,AT4G23580,AT3G20660,AT1G75790,AT5G54030,AT3G19140,AT2G45750,AT3G44140,AT5G13970,AT5G05340,AT1G08920,AT5G13700,AT1G22090,AT5G05640,AT1G01400,AT1G21740,AT1G65590,AT3G60650,AT1G08940,AT5G52900,AT2G17690,AT5G60250,AT2G42480,AT1G24600,AT3G45560,AT4G16600,AT3G55840,AT3G19055,AT3G25670,AT5G65330,AT3G49120,AT1G08470,AT3G17500,AT5G01180,AT4G36610,AT4G18860,AT3G51240,AT4G20050,AT5G10100,AT3G03190,AT2G26910,AT5G17330,AT4G23870,AT5G43340,AT1G36160,AT4G16220,AT3G22730,AT2G40940,AT1G60300,AT3G61450,AT3G49160,AT1G44970,AT4G24130,AT5G37870,AT5G62080,AT5G51950,AT3G59480,AT4G00750,AT1G48960,AT3G63350,AT5G07060,AT2G02710,AT3G58960,AT3G42960,AT5G45840,AT3G26430,AT1G28380,AT3G13220,AT5G37090,AT1G77340,AT3G04720,AT2G31865,AT2G30070,AT5G41530,AT1G04770,AT3G16210,AT1G17950,AT3G22600,AT4G28780,AT1G73890,AT3G16580,AT3G48690,AT2G05330,AT1G02360,AT3G57070,AT1G63950,AT5G53320,AT1G27270,AT4G24960,AT4G21990,AT5G67390,AT2G20800,AT5G27260,AT5G01640,AT1G20680,AT2G39590,AT2G39350,AT5G09530,AT1G42980,AT2G03000,AT3G05930,AT4G02860,AT1G19190,AT5G41400,AT3G50510,AT3G28870,AT5G41630,AT3G58290,AT4G15610,AT5G11120,AT5G39110,AT1G72200,AT3G62440,AT5G03795,AT1G31740,AT1G68540,AT2G31210,AT2G05410,AT2G26940,AT5G07930,AT5G39610,AT1G71110,AT3G44300,AT4G20840,AT4G18290,AT5G44410,AT3G45480,AT2G16760,AT1G49330,AT1G69490,AT2G24030,AT5G53510,AT1G03810,AT4G29980,AT5G52460,AT3G56230,AT1G78720,AT5G55890,AT5G48320,AT3G22370,AT5G45970,AT1G08990,AT4G34210,AT3G49055,AT1G51030,AT5G56100,AT5G39520,AT3G18610,AT5G44970,AT1G18980,AT3G54140,AT4G31950,AT4G39580,AT2G18150,AT1G03340,AT5G15140,AT3G12500,AT1G27710,AT3G45500,AT5G39180,AT5G63600,AT4G18090,AT2G46880,AT1G17190,AT4G34060,AT5G03820,AT5G42590,AT3G53310,AT1G60250,AT4G05270,AT2G45210,AT3G06100,AT1G65990,AT5G03545,AT2G16910,AT1G35910,AT5G39580,AT3G32902,AT2G22510,AT3G55570,AT2G36110,AT2G25230,AT4G33560,AT1G25510,AT2G16620,AT5G44980,AT4G22880,AT2G48130,AT5G40690,AT5G18160,AT1G71470,AT5G42500,AT2G32470,AT2G26400,AT4G37250,AT1G73510,AT2G18950,AT1G16410,AT5G56110,AT3G11980,AT5G55320,AT2G21140,AT3G16710,AT3G58990,AT5G26120,AT1G73260,AT3G59530,AT4G08710,AT2G18530,AT5G62290,AT1G05330,AT2G25625,AT2G18550,AT3G10040,AT5G46040,AT3G07450,AT5G56570,AT5G61800,AT5G55090,AT1G75450,AT2G25510,AT2G45970,AT3G50580,AT2G16005,AT4G26150,AT2G42990,AT1G12030,AT2G10970,AT3G60540,AT5G41450,AT1G74460,AT1G70170,AT5G16920,AT3G25730,AT2G45430,AT2G21430,AT1G59722,AT5G22260,AT2G45220,AT1G69500,AT1G36970,AT5G23890,AT5G07830,AT3G26440,AT3G59510,AT5G40430,AT4G24890,AT5G22390,AT4G14630,AT5G26220,AT1G03620,AT2G38250,AT2G03170,AT1G30700,AT5G62240,AT1G67920,AT1G02400,AT5G13170,AT1G01280,AT4G12140,AT4G11650,AT2G01580,AT4G36430,AT4G31970,AT3G11020,AT5G03810,AT5G46230,AT5G63560,AT3G04070,AT3G04870,AT2G36180,AT2G23510,AT1G47480,AT5G43570,AT1G12010,AT3G52130,AT5G59490,AT1G62935,AT5G52290,AT4G14080,AT1G65560,AT1G62940,AT1G29480,AT1G09880,AT3G48340,AT5G60080,AT5G44540,AT3G19710,AT1G18960,AT5G50260,AT3G46080,AT1G03390,AT2G18610,AT4G35420,AT3G08860,AT5G43580,AT2G29470,AT5G18290,AT5G59880,AT1G02900,AT5G14300,AT5G23190,AT1G43800,AT2G42940,AT1G13910,AT5G26320,AT5G02540,AT4G20420,AT1G54540,AT1G16140,AT1G77530,AT3G05920,AT5G63590,AT1G16950,AT1G23760,AT1G63140,AT3G60140,AT5G16700 ALVES-FERREIRA_ANTHERS_DIFF Genes with known expression in anthers (TableS4 PubmedID:17905860) AT2G19770,AT3G05960,AT3G08560,AT3G19930,AT3G51590,AT5G07510,AT5G07520,AT5G07530,AT5G07560,AT5G07600,AT5G61610,AT5G07540,AT1G75910,AT1G75940,AT5G07550,AT1G23240,AT1G71770,AT3G15400,AT1G24520,AT1G48020,AT1G51260,AT4G28395,AT2G16910,AT3G42960,AT5G22260,AT5G56110,AT1G66170,AT1G69490,AT3G11980 ZHANG_CHLOROPLAST-THYLAKOID_DIFF Differentially spliced genes which were located in chloroplast thylakoid. (TableS7 PubmedID:19025653) AT1G15820,AT1G20020,AT1G31330,AT1G44575,AT2G39470,AT3G01500,AT3G08940,AT3G16000,AT4G03280,AT4G05180,AT4G25080,AT4G39710,AT5G02160,AT5G17170,AT5G21930,AT5G64040,AT1G51350,AT2G40400,AT5G39830,AT5G46390,AT1G06690,AT1G24490,AT1G32060,AT1G77490,AT4G11960,AT5G35630,AT5G37360,AT5G38660,AT5G42080,AT5G42270,AT5G43750,AT5G45390,AT4G18370 ZHANG_CHLOROPLAST-THYLAKOID_THYLAKOID-LUMEN_DIFF Differentially expressed genes which were located in chloroplast thylakoid membrane and thylakoid lumen. (TableS7 PubmedID:19025653) AT1G03600,AT1G06690,AT1G14345,AT1G15820,AT1G34000,AT1G50020,AT2G24020,AT2G34460,AT2G39470,AT2G42220,AT2G47450,AT3G01440,AT3G01480,AT3G08940,AT3G16000,AT3G25480,AT3G25770,AT3G27690,AT3G27925,AT3G45140,AT3G51820,AT3G56940,AT3G63160,AT4G04020,AT4G09010,AT4G13010,AT4G22240,AT4G27440,AT4G37200,AT4G37920,AT4G37925,AT4G38100,AT5G02120,AT5G17170,AT5G20140,AT5G21930,AT5G23060,AT5G28750,AT5G37360,AT5G38660,AT5G42070,AT5G42270,AT5G42650,AT5G43750,AT5G52780,AT1G76100,AT1G76450,AT1G77090,AT2G40400,AT3G56650,AT5G39830 ANASTASIOU_KLU_UP KLU Upregulated Genes (TableS1 PubmedID:18061566) AT1G01390,AT1G01480,AT1G01900,AT1G01930,AT1G05880,AT1G05890,AT1G07260,AT1G12130,AT1G12140,AT1G12610,AT1G12950,AT1G15150,AT1G19320,AT1G19540,AT1G29180,AT1G30720,AT1G62540,AT1G64930,AT1G64960,AT1G74710,AT1G75040,AT1G75050,AT1G76500,AT1G80100,AT1G80130,AT1G80140,AT1G80240,AT2G11810,AT2G17850,AT2G19200,AT2G32210,AT2G38490,AT2G41660,AT2G45550,AT2G45560,AT2G45570,AT2G45580,AT2G46740,AT3G03680,AT3G06910,AT3G09780,AT3G12440,AT3G14910,AT3G17790,AT3G22090,AT3G51090,AT3G55950,AT3G57240,AT3G57250,AT3G62710,AT3G62730,AT3G62740,AT3G62780,AT3G63360,AT4G01870,AT4G15070,AT4G25390,AT4G28980,AT4G29600,AT4G29620,AT4G29630,AT4G29640,AT4G29780,AT4G29820,AT4G36740,AT4G37400,AT4G37990,AT4G38210,AT4G38670,AT5G01540,AT5G24390,AT5G43780,AT5G48330,AT5G61550,AT5G62330,AT5G62340,AT5G63450,AT5G67020 ANASTASIOU_KLU_DN KLU Downregulated Genes (TableS2 PubmedID:18061566) AT1G01600,AT1G07720,AT1G63710,AT1G74670,AT2G21220,AT4G15620,AT4G16590,AT5G38120,AT5G55720 MERIGOUT_CO(NH2)2_NH4NO3_ROOT_UP Upregulated in root between [CO(NH2)2]- and [NH4NO3]-Arabidopsis grown plants (reference). (TableS1 PubmedID:18508958) AT5G45380,AT2G39510,AT3G24290,AT5G10040,AT4G32950,AT1G12940,AT1G12805,AT2G17850,AT3G46230,AT1G73220,AT2G29870,AT2G34390,AT4G32480,AT2G47520,AT3G48450,AT4G10265,AT1G21890,AT1G14880,AT2G14247,AT4G33070,AT3G02550,AT4G01360,AT5G38910,AT5G10060,AT5G44730,AT1G77120,AT3G23170,AT4G12360,AT1G33055,AT3G05690,AT5G54960,AT3G07720,AT5G62530,AT4G27110,AT5G03545,AT2G40340,AT2G43500,AT1G49310,AT3G47720,AT1G07400,AT4G17670,AT4G34950,AT1G49320,AT5G19855,AT4G37220,AT5G58070,AT5G02780,AT2G36260,AT5G64790,AT2G30550,AT5G19140,AT5G39890,AT4G19690,AT5G41610,AT4G26270,AT3G48920,AT1G01580,AT2G25240,AT3G10300,AT1G69880,AT1G64590,AT5G52640,AT5G47060,AT5G67400,AT5E22650,AT4G27490,AT5G04120,AT5G19550,AT3G02800,AT4G27520,AT1G35140,AT3G56590,AT1G47960,AT1G76650,AT4G25820,AT1G62840,AT5G06510,AT4G24110,AT1G01380,AT1G72830,AT1G60450,AT5G38820,AT5G37720,AT3G60270,AT1G43800,AT4G02270,AT3G50740,AT3G27770,AT2G44080,AT4G24040,AT3G22370,AT1G16030,AT5G42200,AT2G20670,AT2G36460,AT5G25110,AT2G14210,AT1G26770,AT3E05310,AT5G11090,AT4G32940,AT1G16850,AT2G38870,AT3G54580,AT2G19860,AT1G05250,AT3G14070,AT1G73120,AT1G68880,AT3G24310,AT4G37530,AT3G44300,AT2G44670,AT5G11110,AT1G17290,AT2G17500,AT4G25200,AT3G20810,AT5G10625,AT3G22840,AT5G63840,AT1G07680,AT2G33710,AT1G66200,AT1G76600,AT1G64720,AT1G68450,AT1G28760,AT5G63820,AT1G73810,AT3G49960,AT3G02555,AT2G35850,AT1G74940,AT3G13620,AT3G05880,AT2G38180,AT2G15830,AT4G33040,AT4G00370,AT5G20150,AT5G51440,AT4G40090,AT4G12430,AT3G55700,AT3G43190,AT3G27220,AT2G37800,AT1G12810,AT5G15120,AT1G72800,AT4G28850,AT4G37520,AT1G03610,AT1G20270,AT1G07870,AT1G54575,AT1G30820,AT3G57380,AT3G48340,AT5G37600,AT5G14340,AT2G03590,AT1G67360,AT1G62980,AT3G08970,AT2G34180,AT1G52820,AT4G09120,AT3G47340,AT1G06225,AT1G30500,AT1G33050,AT3G28480,AT4G22780,AT2G33585,AT1G18980,AT1G60010,AT4G26010,AT5G67220,AT5G37180,AT3G49000,AT2G18680,AT4G34110,AT1G13340,AT5G02200,AT1G69680,AT4G30320,AT3G28210,AT5G15230,AT4G22270,AT1G28680,AT4G11490,AT1G14860,AT4G31250,AT1G21010,AT2G26390,AT3G08590,AT5G09520,AT4G25790,AT2G47950,AT3G19240,AT4G12120,AT3G06435,AT5G44330,AT2G41220,AT3G07490,AT4G17260,AT1G16840,AT5G61440,AT1G55530,AT3G60330,AT1G53620,AT2G18050,AT3G50810,AT1E33130,AT2G02850,AT4G38340,AT1G21680,AT1G26200,AT3G26690,AT5G24810,AT2G41240,AT4G39800,AT4G26220,AT5G37550,AT5G43780,AT5G26320,AT2G46080,AT1G63530,AT1G32920,AT3G21420,AT3G13520,AT5G09620,AT1G68300,AT5G13240,AT1G26270,AT4G39720,AT3G09240,AT3G03020,AT2G34500,AT2G21640,AT2G34470,AT1G59660,AT5G60770,AT5G10410,AT1G56320,AT2G27550,AT2G18370,AT3G11430,AT5G24190,AT4G22640,AT3G59910,AT3G12140,AT2G34890,AT1G74460,AT3G47730,AT2G28840,AT3G22550,AT5G40780,AT3G24500,AT5G10700,AT2G18160,AT5G03360,AT1G69570,AT5G49990,AT2G26560,AT3G58550,AT4G39795,AT1G72540,AT4G37390,AT2G02580,AT5G51830,AT2G29740,AT2G38290,AT1G52790,AT1G59860,AT3G20340,AT4G22590,AT4G27120,AT4G01120,AT4G34410,AT3G61060,AT1G64820,AT3G23560,AT3G48940,AT4G35160,AT5G05500,AT3G50350,AT1G50630,AT5G59820,AT3G52870,AT3G46240,AT3G25410,AT5G47635,AT3G57630,AT4G14980,AT1G30870,AT4G36220,AT4G28550,AT5G45240,AT5G23750,AT2G29500,AT5G47370,AT3G04530,AT5G05410,AT3G10510,AT5G44550,AT1G09070,AT4G37030,AT1G80320,AT2G42250,AT1G55740,AT2G30490,AT4G17550,AT4E21190,AT3G06890,AT2G47710,AT1G12040,AT2G48140,AT1G10140,AT1G22750,AT3G30775,AT3G27570,AT2G38710,AT3G22210,AT1E08820,AT5G47870,AT5G01820,AT3G17800,AT3G55940,AT3G26580,AT5G20010,AT1G33260,AT5G53590,AT5G04960,AT1G79320,AT5G54840,AT4G08455,AT4G15765,AT2G18170,AT5G54470,AT5G56840,AT2G39130,AT1G17950,AT3G18000,AT5G03240,AT1G09180,AT3G57520,AT4G30660,AT4G29180,AT3G60520,AT3G03180,AT5G55970,AT3G07870,AT5G10100,AT1G49970,AT4G35190,AT2G16760,AT3G14940,AT3G12050,AT5G47240,AT5G56630,AT1G67810,AT3G62380,AT5G18840,AT3G24300,AT2G40890,AT1G65690,AT5G44930,AT1G20860,AT5G24090,AT1G71500,AT5G50800,AT3G23030,AT3G10630,AT3G13000,AT3G61410,AT4G14430,AT3G06420,AT5G09480,AT5G44610,AT3G21240,AT1G70490,AT5G58860,AT1G20640,AT1G49730,AT2G47890,AT1G28480,AT3G61930,AT1G61860,AT1G45145,AT5G64970,AT2G17700,AT2G44800,AT2G46550,AT2G26150,AT2G40080,AT3G23150,AT3G01420,AT1G42470,AT4G26950,AT4G04800,AT1G01830,AT1G05060,AT4G10160,AT3G56970,AT4G13860,AT3G52450,AT3G25730,AT5G42610,AT1G23440,AT2G21780,AT3G29630,AT1G71980,AT1G70880,AT3G15020,AT4G17030,AT1G02500,AT5G53500,AT4G10110,AT5G01610,AT2G39420,AT2G36590,AT1G35190,AT1G04220,AT3G61190,AT1G62570,AT5G53420,AT4G31730,AT4G16350,AT4G15130,AT5G23530,AT5G22920,AT2G42350,AT1G16500,AT5G05790,AT3G58810,AT4G17900,AT2G30140,AT2G38370,AT1G06570,AT3G46900,AT1G22070,AT3G59350,AT4G08350,AT2G41380,AT1G75810,AT3G27170,AT4G25760,AT5G18270,AT1G26970,AT1G72050,AT5G05530,AT5G62200,AT4G30370,AT4G07410,AT3G01730,AT5G18350,AT1E22760,AT5G37690,AT3G01520,AT5G13740,AT3G43430,AT1G54100,AT4G27640,AT1G17590,AT3G52930,AT1G54290,AT3G04070,AT4G23700,AT2G03260,AT2G21880,AT1G22220,AT5G49270,AT3G60920,AT2G27500,AT5G58020,AT2G35380,AT1G34670,AT1G68820,AT2G24710,AT1G26410,AT4G15120,AT4G33030,AT4G00670,AT5G50690,AT1G10200,AT3G62780,AT3G52790,AT1G36980,AT4G11600,AT1G78990,AT5G20280,AT5G37740,AT2G31350,ATCGMVL131,AT4G36010,AT2G03720,AT3G27310,AT5G64360,AT5G02380,AT3G09090,AT4G27350,AT1G28200,AT1G53820,AT1G67100,AT3G30260,AT1G07795,AT2G46170,AT2G18670,AT3G14260,AT4G12000,AT1G33930,AT1G08050,AT4G35985,AT1G52120,AT3G11020,AT5G24590,AT2G03410,AT2G20630,AT1G27420,AT3G56980,AT2G44110,AT1G53680,AT5G06190,AT4G20390,AT5G08139,AT1G54217,AT2G44360,AT4G24960,AT3G25740,AT2G16070,AT5G63190,AT1G32520,AT5G44020,AT1G32380,AT2G26670,AT1G01760,AT3G53820,AT2G48130,AT2G46710,AT3G15540,AT5G41800,AT4G23010,AT1G10990,AT3G54880,AT2G39110,AT1G32870,AT4G13510 MERIGOUT_CO(NH2)2_NH4NO3_ROOT_DN Downregulated in root between [CO(NH2)2]- and [NH4NO3]-Arabidopsis grown plants (reference). (TableS1 PubmedID:18508958) AT2G22122,AT4G05230,AT4G29905,AT3G48360,AT1G49500,AT5G63160,AT5G19600,AT2G31081,AT5G14120,AT2G15620,AT1G77760,AT2G25450,AT5G59090,AT5G23220,AT5G01740,AT5G48430,AT4G02380,AT5G59780,AT5G47450,AT4G19750,AT1G73600,AT1G16400,AT4G38470,AT1G73260,AT3G01260,AT5G23010,AT4G11130,AT2G37180,AT5G23020,AT4G17340,AT1G78290,AT1G80380,AT5G67420,AT1G02820,AT1G24290,AT1G78000,AT2G22330,AT1G80050,AT2G25680,AT3G61430,AT2G44220,AT2G05440,AT4G13770,AT2G47160,AT2G36830,AT3G05950,AT2G41560,AT1G49860,AT4G14040,AT5G10210,AT3G02020,AT1E59250,AT5G43580,AT4G15340,AT5G52790,AT2G45960,AT5G19040,AT5G19970,AT1G30730,AT1G78830,AT4G04810,AT4G26920,AT1G21440,AT4G04830,AT2G37130,AT1G49570,AT3G19710,AT1G01190,AT5G44380,AT5G40890,AT5G01210,AT2G30615,AT4G37300,AT3G48990,AT5G04590,AT3G46130,AT3G54600,AT5G07680,AT5G24120,AT5G49360,AT1G48600,AT1G13300,AT4G31330,AT1G30510,AT4G39940,AT3G61420,AT5G56870,AT2G18700,AT2G47170,AT5G54770,AT1G70410,AT5G57660,AT4G30110,AT4G37540,AT3G58990,AT4G31500,AT3G14415,AT1G12110,AT5G62720,AT1G64190,AT5G18170,AT5G05960,AT3G16240,AT2G31660,AT2G33790,AT3G18773,AT2G25900,AT1G45015,AT4G12030,AT2G24150,AT4G13430,AT4G02290,AT2G39200,AT4G39780,AT4G13620,AT5G60890,AT2G43760,AT1G15290,AT5G13110,AT5G41670,AT2G44240,AT3G02850,AT3G15460,AT3G54500,AT5G15830,AT5G51550,AT5G39590,AT1G33340,AT2G30520,AT1G78090,AT1G80830,AT1G75820,AT3G16350,AT3G19930,AT4G02520,AT1G18590,AT5E39460,AT5G65210,AT1G62280,AT5G05730,AT1G68740,AT1G10340,AT2G46650,AT4G15400,AT2G45180,AT4G25835,AT4G01440,AT3G45160,AT3G15950,AT1G30270,AT3G10750,AT1G61740,AT1G01060,AT5G61660,AT4G36670,AT3G03190,AT2G46830,AT3G02885,AT1G20070,AT1G12090,AT1G25550,AT2G33850,AT1G15380,AT5G45340,AT5G62430,AT1G68560,AT3G16560,AT3G26720,AT4G39950,AT1G43710,AT2G30780,AT1G72190,AT4G30450,AT4G10840,AT4G01470,AT1G52050,AT4G14130,AT2G20610,AT4G25620,AT1G54660,AT3G16450,AT1G60140,AT1G73920,AT3G60750,AT4G16260,AT2G26980,AT1G18570,AT3G09260,AT5G53980,AT4G10070,AT5G43180,AT1G13280,AT3G15356,AT1G72300,AT2G13360,AT2G44380,AT5G24660,AT2G41310,AT2G22150,AT1G54000,AT2G45290,AT3G19720,AT3G16470,AT3G53100,AT5G47560,AT5G13420,AT5G37260,AT1G01070,AT2G34710,AT2G26650,AT4G15560,AT5G14780,AT5G51970,AT4G04610,AT3G18280,AT1G15550,AT3G54260,AT3G47960,AT2G39010,AT2G40460,AT4G30530,AT1G04680,AT1G80560,AT1G56220,AT2G28860,AT3G26570,AT1G67110,AT3G49070,AT5G09440,AT1G02220,AT5G24030,AT5G62680,AT4G29080,AT3G13510,AT5G03260,AT3G12880,AT4G14630,AT5G25900,AT2G31610,AT1G24100,AT4G35090,AT3G22890,AT2G28780,AT5G23660,AT3G26520,AT2G47550,AT4G37410,AT4G15330,AT5G10170,AT5G19110,AT5G45310,AT3G25790,AT1G11450,AT1G60710,AT3G18080,AT4G15230,AT3G23570,AT1G51800,AT4G21870,AT4G18010,AT1E31160,AT2G17440,AT4G10080,AT3G01120,AT1G63940,AT1G65960,AT5G64250,AT1G19900,AT1G73885,AT4G02850,AT5G26920,AT1G78660,AT5G59080,AT5G57655,AT2G43610,AT2G18800,AT2G06850,AT5G06800,AT1G43650,AT5G01340,AT1G52060,AT1G78380,AT1G20160,AT1G66430,AT1G10700,AT1G69526,AT3G57040,AT3G03040,AT2G37900,AT1G11580,AT1G58080,AT5G56100,AT5G08260,AT4G14880,AT2G35940,AT1G48760,AT5G13980,AT1G62180,AT2G04795,AT3G51950,AT3G16460,AT4G08850,AT2G22860,AT3G63200,AT5G11920,AT4G22570,AT4G33870,AT5G49520,AT3G45680,AT1G27370,AT5G47390,AT2G25490,AT5G54370,AT3G06380,AT3G01670,AT4G19410,AT5G40450,AT2G34350,AT1G19600,AT1G66140,AT3G01680,AT4G25170,AT2G32270,AT1G13210,AT2G01830,AT4G23810,AT3G61820,AT4G00230,AT1G67860,AT3G25190,AT2G41370,AT2G41010,AT1G31580,AT2G27510,AT1G74090,AT3G12120,AT1G67865,AT3G12890,AT5G13550,AT4G12390,AT1G73660,AT4G22610,AT1G78860,AT3G52340,AT4G36380,AT1G64160,AT2G36120,AT1G25230,AT3G12340,AT2G16900,AT2G28850,AT3G26610,AT1G05710,AT3G58610,AT2G02950,AT4G25080,AT5G48540,AT2G38310,AT1G55450,AT5G58900,AT5G65010,AT1G31770,AT3G01175,AT5G02500,AT5G64100,AT1G59740,AT5G10580,AT1G18250,AT3G63110,AT5G04370,AT1G62810,AT3G03990,AT5G44530,AT5G63600,AT5G43090 MERIGOUT_CO(NH2)2_NH4NO3_SHOOTT_UP Upregulated in shoot between [CO(NH2)2]- and [NH4NO3]-Arabidopsis grown plants (reference) (TableS2 PubmedID:18508958) AT5G17220,AT1G66390,AT1G17745,AT5G42800,AT5G07990,AT5G06510,AT4G11340,AT1G56650,AT4G22880,AT4G39210,AT5G19470,AT1G73330,AT4G25100,AT3G22840,AT4G13770,AT5G15500,AT1G52400,AT5G13930,AT3G05690,AT4G15530,AT5G53420,AT1G76960,AT4G21960,AT2G39800,AT1G57590,AT1G62710,AT2G39330,AT4G03060,AT1G35720,AT4G28250,AT5G42020,AT4G32940,AT2G29630,AT3G04720,AT2G31460,AT4G33010,AT2G25625,AT5G23010,AT4G23600,AT2G40840,AT2G17500,AT2G05715,AT4G29780,AT3G09440,AT3G11410,AT2G31890,AT2G19860,AT3G19710,AT1G23130,AT1G78680,AT1G50480,AT1G35710,AT5G50920,AT3G02020,AT1G76530,AT3G61890,AT1G73600,AT3G54580,AT3G29330,AT3G52180,AT1G52000,AT3G46970,AT5G11670,AT1G19960,AT5G09590,AT5G14590,AT1G76520,AT2G01670,AT1G80840,AT4G27960,AT4G27652,AT1G62560,AT3G60750,AT5G42050,AT2G39420,AT1G67360,AT3G22370,AT5G15400,AT1G50250,AT1G55490,AT2G33770,AT1G29400,AT5G03650,AT5G15450,AT1G78580,AT2G25490,AT1G76180,AT1G03310,AT5G45380,AT4G34980,AT5G26570,AT1G20510,AT1G20480,AT2G24270,AT3G07700,AT1G02850,AT1G20620,AT5G54060,AT5G59130,AT5G58430,AT5G10180,AT5G05270,AT2G26080,AT2G46400,AT1G21440,AT2G39850,AT4G26530,AT5G54770,AT2G05710,AT5G14780,AT1G62540,AT2G37040,AT5G64420,AT2G21650,AT4G34290,AT1G12800,AT3G62750,AT3G15730,AT3G19720,AT4G13840,AT5G07340,AT1G80600,AT3G57530,AT2G25690,AT1G06550,AT2G28820,AT3G46590,AT4G36360,AT3G58990,AT3G18290,AT2G25450,AT1G78370,AT1G65960,AT1G51140,AT1G21750,AT5G44000,AT5G53350,AT5G15020,AT5G63920,AT3G03780,AT1G67750,AT5G67330,AT1G28370,AT5G37600,AT5G41410,AT1G73870,AT4G31500,AT5G58150,AT4G12030,AT2G41640,AT2G28000,AT5G26030,AT2G22240,AT5G13750,AT1G21270,AT5G44100,AT2G27050,AT3G18490,AT3G16150,AT1G77920,AT4G32980,AT5G48300,AT3G51950,AT5G48880,AT5G58330,AT4G23670,AT5G10380,AT2G06050,AT1G21400,AT5G03420,AT5G07690,AT3G28270,AT2G32230,AT3G52430,AT3G44300,AT1G11840,AT5G03190,AT4G39800,AT5G46250,AT5G09620,AT3G19170,AT2G05940,AT3G33002,AT3G24750,AT3G33004,AT5G57350,AT5G12200,AT1G18300,AT2G43500,AT4G30960,AT5G08610,AT1G79830,AT1G52410,AT4G15490,AT3G49680,AT4G14090,AT3G55120,AT1G34060,AT4G35630,AT3G50960,AT1G62290,AT5G53450,AT1G72190,AT1G03630,AT4G28080,AT4G28570,AT4G17770,AT1G52870,AT5G12150,AT5G64820,AT4G34110,AT5G33290,AT5G62530,AT3G02090,AT1G77280,AT1G67870,AT2G41090,AT2G31610,AT1G49970,AT5G64120,AT5G65310,AT5G38530,AT4G39940,AT1G10760,AT5G53120 MERIGOUT_CO(NH2)2_NH4NO3_SHOOTT_DN Downgulated in shoot between [CO(NH2)2]- and [NH4NO3]-Arabidopsis grown plants (reference) (TableS2 PubmedID:18508958) AT1G49500,AT3G16240,AT5G18600,AT3G49940,AT5G48850,AT1G77760,AT1G23390,AT2G05540,AT5G49360,AT5G18670,AT4G29905,AT1G21910,AT2G33830,AT5G62920,AT3G15460,AT2G45180,AT5G22920,AT4G37240,AT5G24660,AT4G23400,AT1G02820,AT3G56200,AT2G06850,AT2G36050,AT4G27290,AT1G03870,AT3G10300,AT2G20670,AT3G06070,AT5G15350,AT3G13520,AT3G50560,AT5G14120,AT5G65010,AT4G23550,AT4G38840,AT5G17300,AT1G02340,AT4G04830,AT4G08950,AT2G21210,AT1G37130,AT5G61590,AT3G19030,AT1G80440,AT3G15630,AT1G23205,AT1E59250,AT3G05880,AT1G72610,AT4G25050,AT2G18420,AT4G21870,AT2G18700,AT5G25460,AT3G18773,AT1G14290,AT5G19120,AT4G16515,AT2G38480,AT5G02160,AT5G19190,AT5G24655,AT5G20630,AT1G08650,AT5G25190,AT2G28190,AT2G25735,AT5G01075,AT5G49450,AT4G17460,AT1G72430,AT1G10020,AT4G25630,AT1G19450,AT5G53250,AT1G20340,AT3G59350,AT1G19050,AT1G72070,AT1G75220,AT1G74670,AT1G11850,AT5G11160,AT3G12120,AT1G35140,AT2G04780,AT1G12520,AT1G15550,AT2G38310,AT1G62180,AT1G57680,AT4G37540,AT5G44020,AT1G74910,AT3G18130,AT4G33670,AT2G01850,AT5G20250,AT4G30290,AT2G14900,AT1G27290,AT5G40890,AT5G51550,AT4G34760,AT1G68440,AT1G25550,AT5G48490,AT2G25810,AT1G26210,AT3G18780,AT3G14770,AT1G67865,AT1G21920,AT5G44110,AT2G47930,AT2G41250,AT4G20870,AT1G26800,AT4G28240,AT1G33340,AT1G60960,AT4G38680,AT1G35580,AT4G35100,AT4G23820,AT2G17230,AT4G23650,AT5G59080,AT5G08330,AT3G52760,AT4G25740,AT5G20110,AT2G25900,AT3G23805,AT4G27130,AT2G20724,AT4G28290,AT2G23290,AT3G23830,AT2G43520,AT2G38120,AT1G30250,AT5G49480,AT2G14890,AT5E39460,AT3G19680,AT4G12730,AT4G32870,AT1G66100,AT2G41560,AT3G07350,AT2G37180,AT4G31290,AT4G37300,AT5G20160,AT5G61660,AT5G56100,AT5G28770,AT5G11070,AT5G63160,AT2G39010,AT4G34740,AT1G26910,AT3G21055,AT3G61770,AT3G24420,AT4G04810,AT1G02335,AT5G45490,AT3G43720,AT2G15620,AT5G64290,AT3E22410,AT5G37475,AT4G36670,AT4G16780,AT3G60245,AT2G40770,AT3G07460,AT3G47420,AT2G25200,AT5G01015,AT1G07135,AT5G36910,AT3G60280,AT4G24960,AT1G09250,AT4G16500,AT4G30610,AT5G67420,AT3G16670,AT2G15090,AT2G46970,AT3G02790,AT5G64620,AT1G69530,AT3G54900,AT2G03440,AT5G15830,AT4G28190,AT1G25230,AT4G37450,AT1G02205,AT1G64640,AT1G22690,AT4G25890,AT1G17700,AT2G37120,AT4G16980,AT4G00400,AT2G40330,AT3G13720,AT3G03990,AT2G43760,AT1G24290,AT5G24850,AT3G05730,AT5G06000,AT2G43460,AT5G06980,AT5G16250,AT1G66230,AT5G18290,AT3G48360,AT1G04550,AT4G38860,AT2G41990,AT5G11420,AT5G15520,AT4G31720,AT4G36130,AT1G36980,AT2G09990,AT3G10250,AT2G27840,AT5G13710,AT5G40970,AT3G04770,AT3G57785,AT2G36300 MERIGOUT_NH4NO3+CO(NH2)2_NH4NO3_ROOT_UP Upregulated in root between [NH4NO3 +CO(NH2)2]- and [NH4NO3]-Arabidopsis grown plants (reference). (TableS4 PubmedID:18508958) AT5G10040,AT2G17850,AT2G29870,AT2G34390,AT3G02550,AT4G33070,AT2G39510,AT4G34950,AT4G10265,AT5G44730,AT1G01580,AT4G27110,AT1G12805,AT3G27220,AT4G01360,AT5G39890,AT1G50750,AT4G32480,AT5G54960,AT5G10060,AT1G33055,AT5G62530,AT1G28760,AT4G14980,AT3G61190,AT1G07135,AT5G38820,AT4G19690,AT5G02780,AT3G12140,AT1G18740,AT1E28850,AT3G07720,AT1G72950,AT3G10300,AT3G46620,AT5G51190,AT1G67150,AT3G48390,AT1G35210,AT5G54470,AT3G47720,AT1G76650,AT4G24390,AT3G02800,AT1G19530,AT1G07150,AT2G14247,AT5G05410,AT3G10040,AT5G64790,AT1G13420,AT1G72360,AT5G22410,AT5G61600,AT3G62260,AT3G56590,AT2G36220,AT1G74450,AT3G57450,AT4G26270,AT1G73500,AT2G20520,AT3G52450,AT3G10930,AT1G64720,AT2G44080,AT3G27770,AT5E22650 MERIGOUT_NH4NO3+CO(NH2)2_NH4NO3_ROOT_DN Downregulated in root between [NH4NO3 +CO(NH2)2]- and [NH4NO3]-Arabidopsis grown plants (reference). (TableS4 PubmedID:18508958) AT4G02290,AT2G25490,AT1G15100,AT5G02500,AT2G07783,AT2G29980,AT5G14040,AT3G09440,AT1G72370,AT3G48360,AT3G12890,AT4G22010,AT3G48560,AT5G04590,AT2G34420,AT3G63210,AT3G54260,AT1G79530,AT4G28300,AT5G40450,AT1G15690,AT5G22650,AT5E05240,AT1G70710,AT3G52060,AT5G49720,AT5G07030,AT2G20515,AT2G41410,AT1G49760,AT5G19120,AT5G10160,AT1G80380,AT5G54370,AT2G46830,AT1G51980,AT3G18490,AT1G18080,AT5G63160,AT1G64650,AT3G03990,AT5G25280,AT2G32600,AT3G60530,AT1G08510,AT1G50430,AT2G01140 MERIGOUT_NH4NO3+CO(NH2)2_NH4NO3_SHOOTT_UP Upregulated in shoot between [NH4NO3 +CO(NH2)2]- and [NH4NO3]-Arabidopsis grown plants (reference). (TableS5 PubmedID:18508958) AT2G07600,AT1G73260,AT1G75830,AT2G43510,AT3G44300,AT2G29350,AT4G15610,AT1G73330,AT3G02480,AT1G76960,AT5G20230,AT3G04720,AT5G26340,AT1G14880,AT2G39030,AT3G60140,AT3G45060,AT3G22620,AT2G38240,AT3G09390,AT2G25000,AT4G11890,AT2G43620,AT5G43580,AT1G52890,AT1G15380,AT5G13080,AT5G14180,AT3G29250,AT4G22490,AT1G21520,AT1G14980,AT5G13490,AT1G74010,AT2G38870,AT1G13340,AT3G10500,AT1G19960,AT1G02850,AT3G29034,AT2G37770,AT2G05440,AT5G48180,AT1G74590,AT1G58340,AT1G67750,AT1G72070,AT3G49780,AT4G22520,AT5G19890,AT2G24850,AT2G25450,AT2G43570,AT2G16790,AT1G66580,AT2G26560,AT2G38400,AT4G39670,AT5G37600,AT1G56650,AT4G03060,AT2G39200,AT5G40780,AT2G39330,AT5G06190,AT2G23430,AT2G31660,AT5G05220,AT3G08770,AT4G34950,AT3G28130,AT1G56150,AT4E25020,AT2G29420,AT2G02990,AT5G50200,AT1G31820,AT4G25340,AT2G43460,AT5G56940,AT4G27790,AT1G17020,AT1G69880,AT2G21640,AT1G65690,AT1G30700,AT1G54410,AT2G45220,AT5G09270,AT3G47670,AT2G03760 MERIGOUT_NH4NO3+CO(NH2)2_NH4NO3_SHOOTT_DN Downregulated in shoot between [NH4NO3 +CO(NH2)2]- and [NH4NO3]-Arabidopsis grown plants (reference). (TableS5 PubmedID:18508958) AT4G25100,AT5G48850,AT5G18670,AT5G17300,AT3G33000,AT5G44110,AT1G50250,AT5G63160,AT3G17510,AT5G24120,AT2G25490,AT4G37760,AT2G05620,AT2G33850,AT4G17090,AT3G48560,AT2G29630,AT5G03555,AT5G53970,AT1G74670,AT5G14120,AT1G62180,AT2G17300,AT1G32900,AT5G08130,AT5G49330,AT4G17460,AT1G03870,AT5G65010,AT1G65930,AT3G47640,AT2G34430,AT4G31875,AT3G09450,AT2G15620,AT1G05010,AT3G13750,AT1G67360,AT3G56200,AT3G55500,AT4G18420 CHEKANOVA_CSL4-MUTATION_UP Arabidopsis genomic regions up-regulated expression upon csl4 mutation (TableS2 PubmedID:18160042) AT1G03010,AT1G04480,AT1G08115,AT1G08440,AT1G09800,AT1G10522,AT1G10680,AT1G11480,AT1G11870,AT1G12013,AT1G13270,AT1G14160,AT1G15400,AT1G16820,AT1G16830,AT1G23860,AT1G24090,AT1G24580,AT1G29410,AT1G29460,AT1G30135,AT1G31820,AT1G32350,AT1G32360,AT1G33860,AT1G36520,AT1G36560,AT1G37160,AT1G37735,AT1G38185,AT1G38450,AT1G40101,AT1G40125,AT1G40630,AT1G41726,AT1G42050,AT1G42360,AT1G42888,AT1G43620,AT1G47395,AT1G47400,AT1G47710,AT1G49240,AT1G54030,AT1G56233,AT1G61490,AT1G64820,AT1G65113,AT1G65450,AT1G65870,AT1G68440,AT1G70190,AT1G70350,AT1G72930,AT1G76910,AT1G78200,AT1G78220,AT1G79510,AT1G79540,AT1G79970,AT2G01010,AT2G01020,AT2G01022,AT2G01026,AT2G02910,AT2G02930,AT2G06250,AT2G06330,AT2G07687,AT2G07791,AT2G10180,AT2G10310,AT2G10600,AT2G12815,AT2G12832,AT2G12845,AT2G14247,AT2G14910,AT2G16586,AT2G18740,AT2G20180,AT2G20400,AT2G20410,AT2G21970,AT2G22990,AT2G26080,AT2G29200,AT2G30770,AT2G31140,AT2G31751,AT2G35744,AT2G35747,AT2G36724,AT2G36870,AT2G41310,AT2G42690,AT3G05670,AT3G05690,AT3G05840,AT3G06180,AT3G06895,AT3G11520,AT3G13275,AT3G13857,AT3G14730,AT3G17280,AT3G17790,AT3G17800,AT3G18773,AT3G19750,AT3G22231,AT3G22235,AT3G25450,AT3G27865,AT3G28100,AT3G28800,AT3G29180,AT3G29600,AT3G30460,AT3G30668,AT3G30695,AT3G32880,AT3G32970,AT3G33055,AT3G33058,AT3G33069,AT3G33070,AT3G33072,AT3G33076,AT3G33081,AT3G33084,AT3G33100,AT3G33103,AT3G33127,AT3G38525,AT3G41345,AT3G41979,AT3G42253,AT3G42256,AT3G42431,AT3G42621,AT3G42622,AT3G42718,AT3G43160,AT3G43862,AT3G43990,AT3G49690,AT3G50070,AT3G55640,AT3G55850,AT3G56705,AT3G56820,AT3G57645,AT3G57770,AT3G61190,AT3G62420,AT4G00050,AT4G00755,AT4G00970,AT4G01890,AT4G02530,AT4G02970,AT4G03340,AT4G03360,AT4G03370,AT4G03790,AT4G03860,AT4G04580,AT4G04655,AT4G05556,AT4G05587,AT4G06474,AT4G06477,AT4G06485,AT4G06573,AT4G06590,AT4G06736,AT4G07586,AT4G07750,AT4G07942,AT4G08025,AT4G08050,AT4G08080,AT4G10845,AT4G17390,AT4G18420,AT4G19170,AT4G19820,AT4G23420,AT4G26750,AT4G27597,AT4G28280,AT4G29410,AT4G29830,AT4G30520,AT4G31350,AT4G31400,AT4G31980,AT4G33080,AT4G35220,AT5G03705,AT5G09590,AT5G09720,AT5G10340,AT5G14540,AT5G15020,AT5G15530,AT5G15850,AT5G17250,AT5G17420,AT5G18670,AT5G19130,AT5G24210,AT5G25770,AT5G26990,AT5G27760,AT5G29032,AT5G29550,AT5G29577,AT5G29805,AT5G31572,AT5G32053,AT5G32241,AT5G32410,AT5G32423,AT5G32475,AT5G32481,AT5G32495,AT5G32726,AT5G33270,AT5G33422,AT5G33436,AT5G34358,AT5G34412,AT5G35057,AT5G35145,AT5G36275,AT5G38890,AT5G38895,AT5G38980,AT5G40395,AT5G44005,AT5G44300,AT5G45230,AT5G46115,AT5G46315,AT5G49060,AT5G51680,AT5G53740,AT5G53905,AT5G54075,AT5G54180,AT5G57830,AT5G58595,AT5G61455,AT5G62420,AT5G62990,AT5G67550 CHEKANOVA_RRP41-EST-MUTATION_UP Arabidopsis genomic regions up-regulated expression upon rrp41est mutation (TableS2 PubmedID:18160042) AT1G02205,AT1G02350,AT1G02580,AT1G02660,AT1G02670,AT1G02740,AT1G03200,AT1G03230,AT1G03502,AT1G03506,AT1G03550,AT1G03743,AT1G03746,AT1G03750,AT1G03935,AT1G03990,AT1G04470,AT1G04480,AT1G04560,AT1G04570,AT1G04625,AT1G07920,AT1G07930,AT1G08620,AT1G09800,AT1G10090,AT1G10110,AT1G10522,AT1G11870,AT1G11910,AT1G12013,AT1G12015,AT1G12290,AT1G12300,AT1G12780,AT1G13080,AT1G13920,AT1G13930,AT1G14160,AT1G15010,AT1G15400,AT1G15410,AT1G16630,AT1G16640,AT1G17970,AT1G17990,AT1G18020,AT1G18075,AT1G18740,AT1G18750,AT1G19373,AT1G19376,AT1G19380,AT1G19720,AT1G19730,AT1G19860,AT1G20010,AT1G20015,AT1G20100,AT1G20110,AT1G20400,AT1G20770,AT1G20780,AT1G21390,AT1G21395,AT1G21980,AT1G22930,AT1G23000,AT1G24062,AT1G24090,AT1G24706,AT1G25550,AT1G26150,AT1G26230,AT1G26233,AT1G26235,AT1G26770,AT1G28660,AT1G29020,AT1G29070,AT1G29410,AT1G29460,AT1G29810,AT1G29820,AT1G30230,AT1G31290,AT1G31835,AT1G31840,AT1G31860,AT1G31885,AT1G32220,AT1G32350,AT1G32360,AT1G32385,AT1G32640,AT1G32910,AT1G33380,AT1G33390,AT1G33860,AT1G33970,AT1G33980,AT1G34000,AT1G34010,AT1G34040,AT1G35270,AT1G35350,AT1G36110,AT1G37160,AT1G37999,AT1G38450,AT1G40106,AT1G40139,AT1G41720,AT1G41760,AT1G41790,AT1G41870,AT1G42360,AT1G42370,AT1G43415,AT1G43502,AT1G43620,AT1G47580,AT1G47710,AT1G47980,AT1G48267,AT1G48270,AT1G48450,AT1G48460,AT1G49245,AT1G49460,AT1G49500,AT1G49700,AT1G50450,AT1G50460,AT1G52430,AT1G52860,AT1G52870,AT1G53090,AT1G53540,AT1G54080,AT1G54100,AT1G54110,AT1G54270,AT1G56070,AT1G56233,AT1G58160,AT1G58807,AT1G59124,AT1G59218,AT1G61270,AT1G61275,AT1G61280,AT1G61400,AT1G61580,AT1G62500,AT1G62930,AT1G63180,AT1G63855,AT1G64560,AT1G64570,AT1G65113,AT1G66500,AT1G66510,AT1G67430,AT1G67890,AT1G67900,AT1G69620,AT1G70190,AT1G70570,AT1G70650,AT1G72410,AT1G72640,AT1G72645,AT1G72650,AT1G72840,AT1G73190,AT1G73687,AT1G74453,AT1G74456,AT1G75100,AT1G75110,AT1G75163,AT1G75166,AT1G75860,AT1G75870,AT1G76910,AT1G77230,AT1G77550,AT1G77560,AT1G77570,AT1G77830,AT1G77840,AT1G78200,AT1G78220,AT1G78350,AT1G78740,AT1G79245,AT1G79510,AT1G79540,AT1G79960,AT1G79970,AT1G80060,AT1G80070,AT1G80150,AT1G80800,AT2G01010,AT2G01020,AT2G01022,AT2G01029,AT2G01250,AT2G03750,AT2G03760,AT2G04066,AT2G04070,AT2G04230,AT2G04235,AT2G04460,AT2G05230,AT2G05240,AT2G05380,AT2G05765,AT2G06590,AT2G06985,AT2G07791,AT2G11550,AT2G12490,AT2G12740,AT2G12750,AT2G12760,AT2G12930,AT2G13270,AT2G14640,AT2G14800,AT2G14910,AT2G15080,AT2G15420,AT2G15535,AT2G15810,AT2G15950,AT2G15960,AT2G16586,AT2G16940,AT2G17295,AT2G17580,AT2G17787,AT2G18030,AT2G18180,AT2G18190,AT2G18300,AT2G18320,AT2G18420,AT2G18440,AT2G18930,AT2G20721,AT2G20722,AT2G20723,AT2G20790,AT2G20800,AT2G21200,AT2G21260,AT2G21270,AT2G21570,AT2G22490,AT2G22650,AT2G22660,AT2G23350,AT2G23440,AT2G24050,AT2G24165,AT2G24560,AT2G24650,AT2G24780,AT2G24790,AT2G25020,AT2G25095,AT2G26160,AT2G26210,AT2G26870,AT2G26890,AT2G30570,AT2G30575,AT2G30780,AT2G31081,AT2G31150,AT2G31751,AT2G32200,AT2G32390,AT2G33430,AT2G33540,AT2G35380,AT2G35382,AT2G35384,AT2G35387,AT2G35740,AT2G35742,AT2G35744,AT2G35747,AT2G36270,AT2G36280,AT2G36720,AT2G36790,AT2G36850,AT2G36860,AT2G37960,AT2G37970,AT2G38330,AT2G38340,AT2G38350,AT2G38560,AT2G39980,AT2G40010,AT2G40340,AT2G41310,AT2G41630,AT2G41940,AT2G42940,AT2G42950,AT2G43110,AT2G43137,AT2G43138,AT2G43139,AT2G43141,AT2G43370,AT2G44900,AT2G44950,AT2G45870,AT2G46190,AT2G46660,AT2G46730,AT2G46735,AT2G47780,AT2G47790,AT3G01100,AT3G01120,AT3G01311,AT3G01313,AT3G01316,AT3G01600,AT3G01980,AT3G01990,AT3G02830,AT3G02870,AT3G03150,AT3G03160,AT3G05670,AT3G05690,AT3G06350,AT3G06895,AT3G06900,AT3G07040,AT3G07220,AT3G07860,AT3G08580,AT3G08730,AT3G10410,AT3G10415,AT3G10420,AT3G10740,AT3G10750,AT3G11180,AT3G11290,AT3G11400,AT3G11520,AT3G13275,AT3G13520,AT3G13525,AT3G13720,AT3G13855,AT3G13857,AT3G13920,AT3G14730,AT3G14735,AT3G15720,AT3G17050,AT3G17090,AT3G17100,AT3G17890,AT3G17900,AT3G18040,AT3G18280,AT3G18850,AT3G18860,AT3G18952,AT3G18955,AT3G19820,AT3G21800,AT3G21805,AT3G22820,AT3G22900,AT3G23860,AT3G23955,AT3G24610,AT3G24612,AT3G24614,AT3G24615,AT3G25450,AT3G25690,AT3G26100,AT3G26120,AT3G26125,AT3G27180,AT3G27260,AT3G27865,AT3G28290,AT3G28300,AT3G28890,AT3G28917,AT3G29180,AT3G30250,AT3G30390,AT3G30668,AT3G30843,AT3G30844,AT3G31314,AT3G31400,AT3G32116,AT3G32280,AT3G32300,AT3G32320,AT3G32330,AT3G33055,AT3G33069,AT3G33070,AT3G33076,AT3G33084,AT3G33100,AT3G33103,AT3G33106,AT3G33118,AT3G33121,AT3G33127,AT3G33154,AT3G33572,AT3G41345,AT3G41768,AT3G41979,AT3G42236,AT3G42431,AT3G42718,AT3G42996,AT3G43160,AT3G43304,AT3G43990,AT3G44713,AT3G44716,AT3G45560,AT3G46060,AT3G46960,AT3G47342,AT3G47347,AT3G47348,AT3G48050,AT3G48060,AT3G48515,AT3G48780,AT3G49000,AT3G49520,AT3G50820,AT3G50825,AT3G51180,AT3G51375,AT3G51800,AT3G52590,AT3G54540,AT3G55300,AT3G55310,AT3G55480,AT3G55640,AT3G55850,AT3G55860,AT3G55940,AT3G56070,AT3G57480,AT3G57990,AT3G58193,AT3G58196,AT3G58220,AT3G58260,AT3G58270,AT3G58290,AT3G58300,AT3G59060,AT3G59070,AT3G59610,AT3G59700,AT3G59710,AT3G61170,AT3G61190,AT3G61620,AT3G62260,AT3G62670,AT3G62680,AT3G63050,AT4G00970,AT4G01580,AT4G02530,AT4G02550,AT4G02555,AT4G02890,AT4G02970,AT4G03070,AT4G03292,AT4G03295,AT4G03300,AT4G03340,AT4G03360,AT4G03370,AT4G05048,AT4G05050,AT4G05180,AT4G05320,AT4G05350,AT4G05360,AT4G05556,AT4G06474,AT4G06477,AT4G06547,AT4G06603,AT4G06606,AT4G07350,AT4G07355,AT4G07750,AT4G07970,AT4G08040,AT4G08780,AT4G10590,AT4G10600,AT4G10603,AT4G10710,AT4G11080,AT4G11177,AT4G11180,AT4G11300,AT4G12190,AT4G12200,AT4G13245,AT4G13570,AT4G14650,AT4G14743,AT4G14910,AT4G15010,AT4G15233,AT4G15236,AT4G15240,AT4G15258,AT4G15260,AT4G16060,AT4G16520,AT4G16860,AT4G16880,AT4G16960,AT4G16970,AT4G17390,AT4G18110,AT4G18120,AT4G18280,AT4G18420,AT4G18790,AT4G18800,AT4G19395,AT4G20180,AT4G21060,AT4G21710,AT4G21720,AT4G21800,AT4G22265,AT4G22270,AT4G22320,AT4G23150,AT4G23170,AT4G23360,AT4G23370,AT4G23420,AT4G23560,AT4G23570,AT4G25200,AT4G25210,AT4G25250,AT4G26360,AT4G26365,AT4G26450,AT4G27597,AT4G28220,AT4G28395,AT4G28530,AT4G28690,AT4G29010,AT4G29380,AT4G29410,AT4G29415,AT4G29900,AT4G30680,AT4G31350,AT4G31400,AT4G31410,AT4G31700,AT4G31980,AT4G32620,AT4G34000,AT4G34020,AT4G34150,AT4G34730,AT4G34950,AT4G35220,AT4G35295,AT4G35470,AT4G35940,AT4G36090,AT4G36540,AT4G36640,AT4G36790,AT4G37295,AT4G37300,AT4G39050,AT4G39060,AT4G39180,AT4G39195,AT4G39361,AT4G39363,AT4G39364,AT4G39366,AT4G39370,AT4G39950,AT5G01170,AT5G01270,AT5G01280,AT5G01290,AT5G01335,AT5G01350,AT5G03440,AT5G03445,AT5G05140,AT5G05640,AT5G06160,AT5G06870,AT5G06890,AT5G07315,AT5G07320,AT5G08180,AT5G08490,AT5G08500,AT5G09585,AT5G09590,AT5G09720,AT5G10340,AT5G10550,AT5G10572,AT5G10945,AT5G11090,AT5G11170,AT5G11200,AT5G11370,AT5G11977,AT5G12160,AT5G12170,AT5G13210,AT5G13225,AT5G13230,AT5G13630,AT5G13640,AT5G14540,AT5G15020,AT5G15530,AT5G16610,AT5G16620,AT5G16910,AT5G17250,AT5G18250,AT5G18270,AT5G18970,AT5G19140,AT5G19150,AT5G19390,AT5G21940,AT5G22791,AT5G22875,AT5G23060,AT5G24550,AT5G24930,AT5G25280,AT5G25770,AT5G26147,AT5G26990,AT5G27060,AT5G27490,AT5G27640,AT5G27650,AT5G27715,AT5G27720,AT5G27760,AT5G27895,AT5G27947,AT5G27950,AT5G27990,AT5G28000,AT5G28430,AT5G29046,AT5G29058,AT5G29550,AT5G29574,AT5G29805,AT5G30276,AT5G31963,AT5G32410,AT5G32423,AT5G32518,AT5G32520,AT5G32521,AT5G32726,AT5G33251,AT5G34358,AT5G34412,AT5G34851,AT5G35057,AT5G35914,AT5G35926,AT5G36110,AT5G36185,AT5G36210,AT5G36275,AT5G37440,AT5G38410,AT5G38540,AT5G38700,AT5G39600,AT5G39770,AT5G40000,AT5G40040,AT5G40395,AT5G40400,AT5G40420,AT5G40800,AT5G41350,AT5G41360,AT5G41471,AT5G41690,AT5G42445,AT5G42670,AT5G43020,AT5G43510,AT5G43620,AT5G43850,AT5G44100,AT5G44270,AT5G44280,AT5G44283,AT5G44286,AT5G44300,AT5G44980,AT5G45110,AT5G46080,AT5G46115,AT5G46270,AT5G46315,AT5G46430,AT5G46440,AT5G46510,AT5G46560,AT5G46640,AT5G46845,AT5G47880,AT5G47890,AT5G48410,AT5G49060,AT5G50995,AT5G51170,AT5G51174,AT5G51180,AT5G51330,AT5G51680,AT5G52470,AT5G52471,AT5G53060,AT5G53230,AT5G53500,AT5G53740,AT5G53902,AT5G53905,AT5G54170,AT5G54180,AT5G54940,AT5G55390,AT5G55780,AT5G56360,AT5G56365,AT5G56860,AT5G58590,AT5G58595,AT5G59600,AT5G59610,AT5G60230,AT5G60250,AT5G60390,AT5G60710,AT5G61300,AT5G61310,AT5G61330,AT5G61445,AT5G61580,AT5G61670,AT5G61835,AT5G62420,AT5G62970,AT5G62990,AT5G63040,AT5G63050,AT5G63330,AT5G63340,AT5G64685,AT5G65230,AT5G65630,AT5G65640,AT5G65660,AT5G65700,AT5G65770,AT5G65860,AT5G66450,AT5G66562,AT5G66564,AT5G66567,AT5G66568,AT5G66570,AT5G67380,AT5G67385,AT5G67411 CHEKANOVA_RRP4-EST-MUTATION_UP Arabidopsis genomic regions up-regulated expression upon rrp4est mutation (TableS2 PubmedID:18160042) AT1G01930,AT1G01940,AT1G02205,AT1G02580,AT1G02610,AT1G02620,AT1G03200,AT1G03230,AT1G03350,AT1G03360,AT1G03502,AT1G03506,AT1G03550,AT1G03740,AT1G03743,AT1G03746,AT1G03750,AT1G03935,AT1G03990,AT1G04470,AT1G04480,AT1G04570,AT1G04625,AT1G07920,AT1G08115,AT1G08120,AT1G09800,AT1G10522,AT1G11250,AT1G11840,AT1G11870,AT1G12013,AT1G12015,AT1G12290,AT1G13920,AT1G13930,AT1G14160,AT1G15000,AT1G15010,AT1G15400,AT1G15410,AT1G16640,AT1G16850,AT1G17990,AT1G18020,AT1G18075,AT1G18710,AT1G18740,AT1G18750,AT1G19373,AT1G19376,AT1G19380,AT1G19860,AT1G20010,AT1G20015,AT1G20100,AT1G20110,AT1G20390,AT1G20400,AT1G20770,AT1G20780,AT1G21050,AT1G21110,AT1G21390,AT1G21395,AT1G22930,AT1G23730,AT1G24090,AT1G24706,AT1G25550,AT1G25784,AT1G26150,AT1G26230,AT1G26233,AT1G26235,AT1G26260,AT1G26920,AT1G27320,AT1G27815,AT1G29070,AT1G29410,AT1G29460,AT1G29810,AT1G29820,AT1G30570,AT1G31860,AT1G31870,AT1G32350,AT1G32360,AT1G32385,AT1G32430,AT1G32640,AT1G33860,AT1G34040,AT1G34390,AT1G34700,AT1G35350,AT1G36110,AT1G36120,AT1G36890,AT1G37120,AT1G37160,AT1G37669,AT1G38230,AT1G38330,AT1G38390,AT1G38423,AT1G38450,AT1G38790,AT1G40085,AT1G40099,AT1G40101,AT1G40103,AT1G40106,AT1G40115,AT1G40121,AT1G40139,AT1G40470,AT1G40630,AT1G41726,AT1G41775,AT1G41790,AT1G41797,AT1G41827,AT1G41870,AT1G42040,AT1G42300,AT1G42350,AT1G42360,AT1G42367,AT1G42370,AT1G42375,AT1G43415,AT1G43502,AT1G43620,AT1G47565,AT1G47580,AT1G47710,AT1G47980,AT1G48267,AT1G48450,AT1G48460,AT1G49245,AT1G49460,AT1G49700,AT1G50450,AT1G50460,AT1G52010,AT1G52860,AT1G52870,AT1G52950,AT1G53040,AT1G53540,AT1G54100,AT1G54110,AT1G54270,AT1G56070,AT1G56233,AT1G58160,AT1G58807,AT1G58848,AT1G59124,AT1G59218,AT1G60095,AT1G61270,AT1G61275,AT1G61280,AT1G61580,AT1G61660,AT1G62040,AT1G63855,AT1G64255,AT1G64560,AT1G64570,AT1G65113,AT1G67430,AT1G69620,AT1G70190,AT1G70290,AT1G70570,AT1G71350,AT1G72410,AT1G72640,AT1G72645,AT1G72650,AT1G73687,AT1G74453,AT1G74456,AT1G75163,AT1G75166,AT1G75860,AT1G75870,AT1G76880,AT1G76910,AT1G77230,AT1G77550,AT1G77560,AT1G77570,AT1G77710,AT1G77830,AT1G77840,AT1G78200,AT1G78220,AT1G78330,AT1G78410,AT1G78630,AT1G78740,AT1G79190,AT1G79245,AT1G79510,AT1G79540,AT1G79960,AT1G79970,AT1G80680,AT1G80800,AT2G01010,AT2G01020,AT2G01022,AT2G01029,AT2G01250,AT2G04230,AT2G04235,AT2G04490,AT2G05510,AT2G05765,AT2G06985,AT2G07711,AT2G07718,AT2G07791,AT2G07880,AT2G07981,AT2G08986,AT2G09850,AT2G09920,AT2G10175,AT2G10190,AT2G10300,AT2G11000,AT2G11005,AT2G11340,AT2G11420,AT2G11430,AT2G11440,AT2G12020,AT2G12320,AT2G12580,AT2G12740,AT2G12750,AT2G12760,AT2G13270,AT2G13380,AT2G13400,AT2G14790,AT2G14800,AT2G14910,AT2G15040,AT2G15080,AT2G15420,AT2G15810,AT2G15950,AT2G15960,AT2G16586,AT2G17090,AT2G17295,AT2G17580,AT2G17787,AT2G18030,AT2G18190,AT2G18300,AT2G18420,AT2G18440,AT2G18930,AT2G20570,AT2G20721,AT2G20722,AT2G20723,AT2G21260,AT2G21270,AT2G21570,AT2G22090,AT2G22490,AT2G22650,AT2G22660,AT2G23350,AT2G25095,AT2G26160,AT2G26210,AT2G26860,AT2G27330,AT2G27340,AT2G27510,AT2G30540,AT2G30760,AT2G31150,AT2G31751,AT2G32670,AT2G32680,AT2G33430,AT2G33540,AT2G34370,AT2G34480,AT2G35130,AT2G35310,AT2G35382,AT2G35384,AT2G35387,AT2G35640,AT2G35740,AT2G35742,AT2G35744,AT2G35747,AT2G35750,AT2G36050,AT2G36270,AT2G36280,AT2G36850,AT2G36860,AT2G37960,AT2G37970,AT2G39175,AT2G40010,AT2G40710,AT2G41310,AT2G41560,AT2G42330,AT2G43110,AT2G43137,AT2G43138,AT2G43139,AT2G43141,AT2G43370,AT2G44950,AT2G45870,AT2G46190,AT2G46660,AT2G47780,AT2G47790,AT3G01100,AT3G01120,AT3G01311,AT3G01313,AT3G01316,AT3G01390,AT3G01400,AT3G01500,AT3G02830,AT3G05670,AT3G05690,AT3G06895,AT3G06900,AT3G07220,AT3G07860,AT3G08730,AT3G09070,AT3G09360,AT3G10410,AT3G10415,AT3G10420,AT3G10740,AT3G10745,AT3G10750,AT3G11010,AT3G11400,AT3G11520,AT3G12120,AT3G12340,AT3G13062,AT3G13275,AT3G13525,AT3G13720,AT3G13855,AT3G13857,AT3G13920,AT3G14550,AT3G14590,AT3G14730,AT3G14735,AT3G15220,AT3G17090,AT3G17100,AT3G17890,AT3G17900,AT3G18040,AT3G18610,AT3G18620,AT3G18850,AT3G18860,AT3G18952,AT3G18955,AT3G19790,AT3G19800,AT3G19820,AT3G20420,AT3G21800,AT3G21805,AT3G22900,AT3G23860,AT5G46070,AT3G24610,AT3G24612,AT3G24614,AT3G24615,AT3G25080,AT3G25450,AT3G26120,AT3G26125,AT3G27180,AT3G27865,AT3G28140,AT3G28500,AT3G28890,AT3G29035,AT3G29075,AT3G29180,AT3G29430,AT3G29570,AT3G29792,AT3G30250,AT3G30418,AT3G30433,AT3G30665,AT3G30668,AT3G30690,AT3G30838,AT3G30843,AT3G30844,AT3G32116,AT3G32300,AT3G32397,AT3G32894,AT3G32968,AT3G32980,AT3G33055,AT3G33069,AT3G33070,AT3G33076,AT3G33084,AT3G33100,AT3G33103,AT3G33106,AT3G33121,AT3G33127,AT3G33189,AT3G38525,AT3G41345,AT3G41768,AT3G41979,AT3G42052,AT3G42130,AT3G42431,AT3G42718,AT3G42727,AT3G43160,AT3G43303,AT3G43307,AT3G43571,AT3G43600,AT3G43690,AT3G43850,AT3G43867,AT3G43990,AT3G44713,AT3G44716,AT3G47230,AT3G47240,AT3G47342,AT3G47347,AT3G47348,AT3G47500,AT3G48050,AT3G48515,AT3G48780,AT3G48980,AT3G49640,AT3G50480,AT3G50680,AT3G50820,AT3G50825,AT3G51180,AT3G51375,AT3G51770,AT3G51800,AT3G52590,AT3G55480,AT3G55640,AT3G55850,AT3G55940,AT3G56070,AT3G57990,AT3G58100,AT3G58110,AT3G58193,AT3G58196,AT3G58220,AT3G59060,AT3G59070,AT3G59700,AT3G59710,AT3G61190,AT3G62280,AT3G62285,AT3G62290,AT3G62670,AT3G62680,AT3G62900,AT4G00970,AT4G01580,AT4G02280,AT4G02530,AT4G02550,AT4G02555,AT4G02970,AT4G03070,AT4G03292,AT4G03295,AT4G03300,AT4G03340,AT4G03360,AT4G03370,AT4G03430,AT4G03435,AT4G03840,AT4G04170,AT4G05048,AT4G05180,AT4G05300,AT4G05306,AT4G05320,AT4G05556,AT4G05560,AT4G05587,AT4G05610,AT4G06474,AT4G06477,AT4G06486,AT4G06530,AT4G06547,AT4G06572,AT4G06603,AT4G06606,AT4G06607,AT4G06700,AT4G06702,AT4G06708,AT4G06716,AT4G06738,AT4G07350,AT4G07355,AT4G07630,AT4G07660,AT4G07750,AT4G07755,AT4G07760,AT4G07890,AT4G07893,AT4G07896,AT4G07931,AT4G07970,AT4G08030,AT4G08040,AT4G08130,AT4G08810,AT4G08890,AT4G09580,AT4G10580,AT4G10710,AT4G11080,AT4G11177,AT4G11180,AT4G11370,AT4G11540,AT4G12480,AT4G12490,AT4G13245,AT4G14743,AT4G14910,AT4G15233,AT4G15258,AT4G15260,AT4G16060,AT4G17390,AT4G18420,AT4G20180,AT4G20330,AT4G20340,AT4G21060,AT4G21680,AT4G21800,AT4G22265,AT4G22270,AT4G22320,AT4G22820,AT4G23170,AT4G23360,AT4G23370,AT4G23420,AT4G23560,AT4G23570,AT4G23713,AT4G25250,AT4G26360,AT4G26365,AT4G26450,AT4G27440,AT4G27597,AT4G28220,AT4G28230,AT4G29410,AT4G29415,AT4G29900,AT4G29960,AT4G30680,AT4G31350,AT4G31400,AT4G31410,AT4G31980,AT4G32010,AT4G33080,AT4G34000,AT4G34730,AT4G35220,AT4G35295,AT4G35940,AT4G36540,AT4G36640,AT4G36790,AT4G37020,AT4G37300,AT4G37540,AT4G39050,AT4G39060,AT4G39180,AT4G39195,AT4G39361,AT4G39363,AT4G39364,AT4G39366,AT5G01280,AT5G01290,AT5G01335,AT5G01350,AT5G02740,AT5G03440,AT5G03445,AT5G03850,AT5G06160,AT5G06870,AT5G06890,AT5G07010,AT5G07315,AT5G07320,AT5G08180,AT5G08185,AT5G08190,AT5G09585,AT5G09590,AT5G09720,AT5G10340,AT5G10572,AT5G10945,AT5G11090,AT5G11977,AT5G12160,AT5G12170,AT5G13225,AT5G13230,AT5G13630,AT5G13640,AT5G14540,AT5G15020,AT5G15530,AT5G16610,AT5G16620,AT5G16760,AT5G17250,AT5G18250,AT5G18580,AT5G19140,AT5G19150,AT5G20990,AT5G21940,AT5G22875,AT5G24300,AT5G25280,AT5G25770,AT5G25790,AT5G25880,AT5G26620,AT5G26990,AT5G27060,AT5G27640,AT5G27650,AT5G27715,AT5G27720,AT5G27760,AT5G28000,AT5G28110,AT5G28120,AT5G28430,AT5G28545,AT5G28615,AT5G28620,AT5G28715,AT5G28840,AT5G29058,AT5G29550,AT5G29568,AT5G29574,AT5G29805,AT5G31685,AT5G31702,AT5G31770,AT5G31804,AT5G31821,AT5G31963,AT5G32312,AT5G32400,AT5G32405,AT5G32410,AT5G32420,AT5G32423,AT5G32430,AT5G32431,AT5G32473,AT5G32489,AT5G32490,AT5G32520,AT5G32630,AT5G32702,AT5G32726,AT5G33223,AT5G33251,AT5G33254,AT5G33256,AT5G33306,AT5G33382,AT5G33624,AT5G33898,AT5G34358,AT5G34412,AT5G35045,AT5G35052,AT5G35657,AT5G35914,AT5G36110,AT5G36185,AT5G36210,AT5G36275,AT5G36732,AT5G36825,AT5G37440,AT5G37730,AT5G39770,AT5G40330,AT5G40395,AT5G40400,AT5G40770,AT5G41350,AT5G41360,AT5G41471,AT5G41835,AT5G42445,AT5G43350,AT5G43510,AT5G44060,AT5G44100,AT5G44270,AT5G44280,AT5G44283,AT5G44286,AT5G44300,AT5G44860,AT5G45110,AT5G46115,AT5G46315,AT5G46430,AT5G46440,AT5G46510,AT5G46560,AT5G46640,AT5G46845,AT5G47880,AT5G47890,AT5G48410,AT5G49060,AT5G49960,AT5G50440,AT5G50995,AT5G51170,AT5G51174,AT5G51180,AT5G51680,AT5G52470,AT5G52471,AT5G52545,AT5G53060,AT5G53230,AT5G53740,AT5G53902,AT5G53905,AT5G54064,AT5G54070,AT5G54075,AT5G54080,AT5G54180,AT5G54280,AT5G54940,AT5G55390,AT5G56240,AT5G56360,AT5G56365,AT5G56860,AT5G57870,AT5G58000,AT5G58595,AT5G59370,AT5G60390,AT5G60710,AT5G61310,AT5G61330,AT5G61445,AT5G61670,AT5G61835,AT5G62680,AT5G62990,AT5G63040,AT5G63050,AT5G63330,AT5G63340,AT5G63860,AT5G64685,AT5G64980,AT5G65230,AT5G65630,AT5G65700,AT5G65770,AT5G65860,AT5G66450,AT5G66562,AT5G66564,AT5G66567,AT5G66568,AT5G66570,AT5G67411 CHEKANOVA_CSL4-MUTATION_DN Arabidopsis genomic regions down-regulated expression upon csl4 mutation (TableS2 PubmedID:18160042) AT1G01140,AT1G01190,AT1G01320,AT1G01950,AT1G02660,AT1G03630,AT1G03740,AT1G04040,AT1G04300,AT1G04850,AT1G05560,AT1G06570,AT1G06950,AT1G08520,AT1G08540,AT1G08550,AT1G09210,AT1G09310,AT1G09770,AT1G10760,AT1G11480,AT1G12120,AT1G12270,AT1G12360,AT1G12800,AT1G13110,AT1G13350,AT1G14380,AT1G14610,AT1G14690,AT1G15040,AT1G15290,AT1G15340,AT1G15780,AT1G15910,AT1G16210,AT1G17140,AT1G17360,AT1G17980,AT1G17990,AT1G18030,AT1G18330,AT1G18620,AT1G19835,AT1G19870,AT1G20010,AT1G20020,AT1G20440,AT1G20630,AT1G21310,AT1G21710,AT1G22060,AT1G22530,AT1G22570,AT1G22882,AT1G22930,AT1G23030,AT1G23400,AT1G24160,AT1G25540,AT1G26830,AT1G27210,AT1G28060,AT1G28400,AT1G29090,AT1G29350,AT1G29370,AT1G29470,AT1G29670,AT1G32060,AT1G32450,AT1G32490,AT1G32530,AT1G33240,AT1G36730,AT1G37130,AT1G42550,AT1G43860,AT1G48760,AT1G49970,AT1G49975,AT1G50270,AT1G50660,AT1G50920,AT1G52380,AT1G52420,AT1G53430,AT1G53440,AT1G53800,AT1G54410,AT1G54420,AT1G55450,AT1G55490,AT1G56110,AT1G56340,AT1G60860,AT1G61100,AT1G61690,AT1G62380,AT1G62670,AT1G62740,AT1G62750,AT1G63740,AT1G64170,AT1G64370,AT1G65010,AT1G65230,AT1G65660,AT1G66840,AT1G67230,AT1G67870,AT1G68060,AT1G68250,AT1G68560,AT1G68830,AT1G69830,AT1G70070,AT1G70100,AT1G70620,AT1G71080,AT1G71695,AT1G71696,AT1G71710,AT1G71720,AT1G72150,AT1G72160,AT1G72170,AT1G72410,AT1G73110,AT1G73960,AT1G74250,AT1G74680,AT1G74690,AT1G75100,AT1G75800,AT1G76160,AT1G76810,AT1G76890,AT1G77170,AT1G77760,AT1G78580,AT1G78600,AT1G79140,AT1G79200,AT1G79600,AT1G79830,AT1G80180,AT1G80790,AT2G01100,AT2G01520,AT2G01910,AT2G02160,AT2G02570,AT2G02820,AT2G02950,AT2G03340,AT2G03390,AT2G03640,AT2G04030,AT2G04160,AT2G05230,AT2G06210,AT2G06530,AT2G11100,AT2G13370,AT2G16365,AT2G16940,AT2G17440,AT2G17980,AT2G18300,AT2G20330,AT2G20760,AT2G20770,AT2G20970,AT2G21250,AT2G21300,AT2G21530,AT2G21560,AT2G21660,AT2G22300,AT2G23610,AT2G25450,AT2G25940,AT2G26190,AT2G26570,AT2G26920,AT2G26990,AT2G27170,AT2G27285,AT2G28280,AT2G28630,AT2G28800,AT2G28900,AT2G28910,AT2G29210,AT2G29490,AT2G29510,AT2G29525,AT2G29630,AT2G30500,AT2G30990,AT2G31370,AT2G32240,AT2G32910,AT2G33730,AT2G33830,AT2G34300,AT2G34357,AT2G34620,AT2G35050,AT2G35880,AT2G36760,AT2G36990,AT2G38040,AT2G38050,AT2G38470,AT2G38650,AT2G38800,AT2G39310,AT2G41100,AT2G41310,AT2G41960,AT2G42880,AT2G43680,AT2G43900,AT2G43970,AT2G44060,AT2G46810,AT2G47390,AT3G01060,AT3G01310,AT3G02170,AT3G04340,AT3G04910,AT3G05060,AT3G05220,AT3G05380,AT3G05840,AT3G05900,AT3G06400,AT3G06640,AT3G06850,AT3G07780,AT3G09210,AT3G09850,AT3G10113,AT3G11450,AT3G11460,AT3G11590,AT3G11910,AT3G14205,AT3G14350,AT3G14660,AT3G14690,AT3G14840,AT3G14900,AT3G15950,AT3G16000,AT3G16840,AT3G18390,AT3G18890,AT3G18980,AT3G19370,AT3G19515,AT3G19860,AT3G20350,AT3G21430,AT3G22170,AT3G22380,AT3G22520,AT3G23030,AT3G23310,AT3G23700,AT3G24120,AT3G25690,AT3G25840,AT3G26300,AT3G26730,AT3G28740,AT3G29075,AT3G29185,AT3G29320,AT3G29330,AT3G33106,AT3G43590,AT3G43800,AT3G44200,AT3G45770,AT3G45780,AT3G45850,AT3G45970,AT3G46780,AT3G46970,AT3G47340,AT3G47500,AT3G47610,AT3G47875,AT3G47900,AT3G48870,AT3G48990,AT3G49060,AT3G49220,AT3G49490,AT3G50960,AT3G51150,AT3G51550,AT3G51650,AT3G51950,AT3G52220,AT3G53540,AT3G54050,AT3G54540,AT3G54760,AT3G56150,AT3G56860,AT3G57150,AT3G58110,AT3G59060,AT3G60240,AT3G60320,AT3G60950,AT3G61030,AT3G61260,AT3G62150,AT3G62910,AT3G62940,AT3G63400,AT3G63490,AT3G63500,AT4G00380,AT4G00750,AT4G01290,AT4G01800,AT4G01883,AT4G02260,AT4G02560,AT4G02720,AT4G02920,AT4G03000,AT4G04420,AT4G05240,AT4G08850,AT4G09150,AT4G09630,AT4G10060,AT4G10120,AT4G10710,AT4G10790,AT4G10845,AT4G11420,AT4G12400,AT4G12420,AT4G12770,AT4G12780,AT4G13490,AT4G15230,AT4G15440,AT4G15545,AT4G16660,AT4G16990,AT4G17090,AT4G17100,AT4G17330,AT4G17520,AT4G18030,AT4G18240,AT4G18740,AT4G19110,AT4G19150,AT4G19530,AT4G19540,AT4G19600,AT4G20860,AT4G21210,AT4G21960,AT4G23190,AT4G23280,AT4G23560,AT4G23890,AT4G24190,AT4G24280,AT4G24680,AT4G25730,AT4G27120,AT4G27180,AT4G27430,AT4G27440,AT4G27500,AT4G27710,AT4G27800,AT4G27860,AT4G27880,AT4G28080,AT4G28520,AT4G28610,AT4G29060,AT4G29070,AT4G29440,AT4G30140,AT4G30690,AT4G31880,AT4G32190,AT4G32330,AT4G32360,AT4G32420,AT4G32620,AT4G32765,AT4G33750,AT4G34030,AT4G34135,AT4G34138,AT4G34350,AT4G34430,AT4G34610,AT4G35785,AT4G35940,AT4G36980,AT4G37120,AT4G37130,AT4G37550,AT4G37820,AT4G38280,AT4G38550,AT4G39690,AT4G39840,AT5G01590,AT5G01750,AT5G02810,AT5G02830,AT5G03940,AT5G04810,AT5G05220,AT5G06110,AT5G07250,AT5G08130,AT5G08370,AT5G08420,AT5G09530,AT5G09620,AT5G09880,AT5G10150,AT5G10470,AT5G10490,AT5G10550,AT5G10950,AT5G11510,AT5G12120,AT5G12410,AT5G13010,AT5G13470,AT5G13560,AT5G13590,AT5G13770,AT5G13780,AT5G13950,AT5G14370,AT5G14720,AT5G14920,AT5G15450,AT5G16030,AT5G16210,AT5G16680,AT5G16730,AT5G19220,AT5G19540,AT5G19550,AT5G20490,AT5G22450,AT5G22620,AT5G22640,AT5G22791,AT5G22800,AT5G23610,AT5G24030,AT5G24470,AT5G24490,AT5G24500,AT5G25080,AT5G25260,AT5G25630,AT5G25754,AT5G26000,AT5G27120,AT5G27290,AT5G28540,AT5G35690,AT5G36005,AT5G37380,AT5G38140,AT5G38530,AT5G38880,AT5G39570,AT5G39580,AT5G40450,AT5G41410,AT5G42020,AT5G42050,AT5G42520,AT5G42540,AT5G42920,AT5G43560,AT5G43900,AT5G44380,AT5G45190,AT5G45430,AT5G45460,AT5G45470,AT5G45480,AT5G45510,AT5G45820,AT5G46070,AT5G47690,AT5G47820,AT5G49030,AT5G49910,AT5G50920,AT5G52440,AT5G52640,AT5G52880,AT5G53440,AT5G53850,AT5G54280,AT5G54630,AT5G54710,AT5G55030,AT5G55100,AT5G55230,AT5G55300,AT5G55920,AT5G56240,AT5G56360,AT5G56850,AT5G57035,AT5G57990,AT5G58040,AT5G58130,AT5G58800,AT5G59540,AT5G59780,AT5G61150,AT5G61270,AT5G62390,AT5G62810,AT5G63320,AT5G63550,AT5G63790,AT5G64120,AT5G64340,AT5G64840,AT5G65440,AT5G65540,AT5G65780,AT5G65910,AT5G66020,AT5G67385,AT5G67480 CHEKANOVA_RRP41-EST-MUTATION_DN Arabidopsis genomic regions down-regulated expression upon rrp41est mutation (TableS2 PubmedID:18160042) AT1G01370,AT1G02900,AT1G05210,AT1G05240,AT1G05250,AT1G05830,AT1G06360,AT1G06610,AT1G07260,AT1G07320,AT1G11600,AT1G12030,AT1G13280,AT1G14960,AT1G18650,AT1G20030,AT1G21700,AT1G30870,AT1G34510,AT1G45015,AT1G45191,AT1G47480,AT1G48350,AT1G53520,AT1G62500,AT1G62980,AT1G64590,AT1G66800,AT1G67330,AT1G67860,AT1G67865,AT1G67870,AT1G68400,AT1G70790,AT1G70850,AT1G72230,AT1G73330,AT1G75800,AT1G76790,AT1G80240,AT1G80280,AT2G01010,AT2G01020,AT2G01520,AT2G16005,AT2G16850,AT2G24980,AT2G25060,AT2G25810,AT2G28790,AT2G29750,AT2G31083,AT2G32270,AT2G33790,AT2G36830,AT2G38380,AT2G38390,AT2G40530,AT2G42840,AT2G43030,AT2G43150,AT2G43470,AT2G43535,AT2G44450,AT2G47540,AT2G48140,AT3G01190,AT3G02120,AT3G04290,AT3G05727,AT3G12145,AT3G15030,AT3G17680,AT3G17840,AT3G18960,AT3G19820,AT3G22570,AT3G22930,AT3G24300,AT3G25190,AT3G28550,AT3G41768,AT3G41979,AT3G44326,AT3G49880,AT3G53530,AT3G53850,AT3G54560,AT3G62680,AT3G62780,AT4G00080,AT4G00780,AT4G01580,AT4G02270,AT4G03120,AT4G09090,AT4G09160,AT4G11190,AT4G11290,AT4G11310,AT4G11320,AT4G12510,AT4G12520,AT4G12545,AT4G12550,AT4G12970,AT4G14060,AT4G17750,AT4G20390,AT4G21600,AT4G21850,AT4G22212,AT4G22230,AT4G22235,AT4G22480,AT4G22490,AT4G22500,AT4G22510,AT4G22520,AT4G22610,AT4G22810,AT4G26010,AT4G26220,AT4G26520,AT4G29030,AT4G30170,AT4G31290,AT4G31840,AT4G33360,AT4G34250,AT4G37410,AT4G37700,AT4G38080,AT4G38430,AT4G38660,AT4G39860,AT5G02550,AT5G03545,AT5G05500,AT5G06270,AT5G07030,AT5G11390,AT5G14330,AT5G15230,AT5G15530,AT5G16250,AT5G17820,AT5G19060,AT5G19340,AT5G20630,AT5G22940,AT5G23530,AT5G23830,AT5G23840,AT5G23940,AT5G24420,AT5G24490,AT5G24780,AT5G25490,AT5G25830,AT5G38930,AT5G38940,AT5G39130,AT5G39160,AT5G39190,AT5G40510,AT5G42500,AT5G42510,AT5G44550,AT5G46890,AT5G46900,AT5G47450,AT5G47980,AT5G47990,AT5G48490,AT5G49120,AT5G55450,AT5G56540,AT5G57625,AT5G60660,AT5G60950,AT5G62340,AT5G66580,AT5G66940,AT5G67260 CHEKANOVA_RRP4-EST-MUTATION_DN Arabidopsis genomic regions down-regulated expression upon rrp4est mutation (TableS2 PubmedID:18160042) AT1G05240,AT1G05250,AT1G06090,AT1G06120,AT1G30870,AT1G34510,AT1G62980,AT1G64590,AT1G66270,AT1G66800,AT1G67230,AT1G67865,AT1G67870,AT1G70850,AT1G73330,AT1G77330,AT1G80240,AT2G01010,AT2G01520,AT2G12646,AT2G20515,AT2G25810,AT2G25980,AT2G33790,AT2G34510,AT2G35120,AT2G36100,AT2G36870,AT2G37170,AT2G38810,AT2G42840,AT2G43610,AT2G47200,AT3G01190,AT3G05650,AT3G22570,AT3G24300,AT3G28550,AT3G29250,AT3G41768,AT3G54580,AT3G54590,AT3G62680,AT3G63430,AT4G02270,AT4G04510,AT4G11320,AT4G12510,AT4G12520,AT4G12545,AT4G12550,AT4G19030,AT4G21850,AT4G22212,AT4G22490,AT4G26010,AT4G28210,AT4G30170,AT4G40090,AT5G05500,AT5G14330,AT5G15350,AT5G16250,AT5G17820,AT5G22791,AT5G23710,AT5G24420,AT5G38940,AT5G43350,AT5G43370,AT5G46890,AT5G46900,AT5G47450,AT5G47990,AT5G48490,AT5G53250,AT5G56540,AT5G57625,AT5G60660,AT5G60950,AT5G62340,AT2G23840 CHEN_MET1/GUS-A-SUECICA_UP Up--regulated in the met1-RNAi A. suecica line relative to a GUS-A. suecica line (TableS5 PubmedID:18430920) AT5G24610,AT5G11470,AT4G06537,AT3G58250,AT2G04066,AT5G38705,AT2G11090,AT1G41855,AT5G35800,AT1G42040,AT5G03435,AT4G07630,AT5G32161,AT5G48400,AT5G49520,AT5G31702,AT2G13580,AT4G04170,AT4G03580,AT5G32511,AT1G59920,AT2G17690,AT3G30718,AT4G05640,AT4G08010,AT1G06040,AT3G44260,AT4G09630,AT4G22110,AT3G04630,AT3G18780,AT3G55980,AT2G07880,AT5G28515,AT4G27930,AT3G06433,AT1G36470,AT3G02860,AT4G08103,AT2G38470,AT5G46430,AT1G09070,AT5G62680,AT3G52920,AT5G38890,AT5G06320,AT4G00220,AT3G20700,AT2G14630,AT5G42050,AT5G32405,AT4G08450,AT4G13900,AT5G66070,AT5G35735,AT4G03860,AT5G13090,AT3G56250,AT3G57530,AT1G27730,AT3G56880,AT4G17450,AT1G69760,AT2G12420,AT3G45640,AT2G29610,AT2G28510,AT2G22500,AT4G30270,AT1G80840,AT2G23810,AT4G21120,AT1G60030,AT2G41100,AT4G02010,AT1G58440,AT5G01920,AT5G04150,AT4G38550,AT5G66210,AT4G07967,AT5G11740,AT3G31358,AT3G28005,AT3G06437,AT4G05510,AT3G54410,AT5G62520,AT5G40100,AT4G36170,AT1G72910,AT3G07880,AT2G23310,AT1G13600,AT5G41120,AT1G32870,AT5G52760,AT5G45790,AT5G42510,AT2G12730,AT2G06910,AT3G47960,AT5G36140,AT5G54145,AT4G12870,AT1G55450,AT4G07720,AT5G03650,AT5G35332,AT1G42200,AT3G60280,AT4G10060,AT4G24570,AT3G21550,AT1G27100,AT5G44660,AT1G48750,AT1G79050,AT5G24210,AT1G18740 CHEN_MET1/GUS-A-SUECICA_DN Down-regulated in the met1-RNAi A. suecica line relative to a GUS-A. suecica line (TableS5 PubmedID:18430920) AT1G47960,AT5G35450,AT4G25490,AT5G40390,AT4G32900,AT1G60610,AT1G67070,AT3G49120,AT1G21590,AT3G04720,AT4G27450,AT4G13030,AT5G15970,AT1G29390,AT1G56280,AT4G19940,AT5G55450,AT4G17020,AT1G35850,AT5G44420,AT2G26010,AT3G19895,AT2G15960,AT5G25610,AT3G61280,AT3G42060,AT5G44430,AT5G37770,AT5G45490,AT2G17970,AT3G51710,AT5G15960,AT1G13990,AT2G16580,AT4G14500,AT1G71130,AT1G71520,AT3G12440,AT2G02930,AT3G28990,AT2G15380,AT4G21310,AT5G24260,AT5G28920,AT5G39760,AT5G02520,AT4G14350,AT5G07730,AT4G33290,AT5G55590,AT1G75750,AT2G05530,AT1G33950,AT1G14880,AT5G40820,AT3G22240,AT2G33830,AT1G78110,AT3G01840,AT3G17050,AT1G10420,AT4G08320,AT3G46850,AT2G05510,AT1G54650,AT4G35290,AT3G12720,AT2G14610,AT2G03680,AT2G20060,AT5G39520,AT2G14580,AT3G20935,AT5G24770,AT1G72290,AT5G24780,AT3G22231 CHEN_ALLOS-DN_MET1A-UP Downregulated in both allos and met1 microarray (TableS6 PubmedID:18430920) AT5G24780,AT5G39520,AT5G24770,AT1G72290,AT4G27450,AT1G67070 CHEN_ALLOS_MET1A_DN Upregulated in both allos and met1 microarray (TableS6 PubmedID:18430920) AT4G12870 CHEN_ALLOS_MET1A_UP Upregulated in allos but downregulated in met1 microarray (TableS6 PubmedID:18430920) AT5G25610,AT2G05510 CHEN_ALLOS-UP_MET1A-DN Downregulated in allos but upregulated in met1 microarray (TableS6 PubmedID:18430920) AT5G54145,AT4G24570,AT3G56880,AT3G44260,AT5G62680,AT3G60280,AT2G41100,AT3G55980,AT1G27730,AT5G62520,AT2G23310,AT5G49520,AT5G01920,AT2G23810,AT1G80840,AT1G18740,AT2G22500,AT5G11740,AT1G27100,AT5G06320,AT2G38470,AT2G13580,AT4G30270,AT1G55450 ZIMMERLI_BABA/WT-TREATED_UP Upregulated by BABA-treated/water-treated (TableS1 PubmedID:18047473) AT1G09460,AT5G45480,AT5G47810,AT2G03120,AT2G41070,AT2G02220,AT3G30122,AT2G23410,AT1G24360,AT3G07750,AT2G24300,AT3G33520,AT5G47640,AT4G18230,AT3G21720,AT5G05360,AT3G11690,AT3G06810,AT3G28345,AT1G30755,AT3G11950,AT5G63280,AT3G56230,AT1G74950,AT3G29270,AT5G39220,AT4G15330,AT2G39370,AT5G02840,AT1G24460,AT4G28950,AT1G75420,AT1G71250,AT5G18920,AT1G27540,AT4G20330,AT1G11545,AT4G00400,AT2G36490,AT2G21950,AT1G10170,AT5G41040,AT1G73540,AT5G03540,AT1G28400,AT4G30060,AT1G67360,AT1G68180,AT5G55240,AT3G20010,AT5G54730,AT5G46180,AT3G04320,AT3G26100,AT5G64500,AT2G44470,AT1G21200,AT1G51250,AT5G15850,AT5G52900,AT4G28520,AT2G01930,AT2G25670,AT2G21520,AT1G70340,AT5G65440,AT1G05050,AT3G05500,AT2G45530,AT5G24170,AT5G25270,AT4G19880,AT3G03070,AT4G38980,AT5G04130,AT1G80530,AT5G14970,AT4G00755,AT2G32640,AT4G28760,AT5G55970,AT3G47160,AT3G63030,AT5G55180,AT1G79330,AT4G37680,AT3G62260,AT3G43960,AT5G45360,AT5G63600,AT3G60600,AT1G76990,AT5G62470,AT3G26910,AT2G32980,AT3G25140,AT5G38850,AT5G59710,AT2G42760,AT5G53370,AT3G61180,AT3G62730,AT5G01800,AT5G15980,AT5G51890,AT5G09300,AT4G36810,AT5G46690,AT3G25740,AT1G80500,AT5G01600,AT5G67250,AT3G12480,AT2G46220,AT5G19120,AT1G16040,AT5G62330,AT5G67240,AT3G23660,AT5G50200,AT1G77670,AT3G05890,AT3G12150,AT3G46060,AT5G09960,AT1G54210,AT2G40280,AT1G49230,AT1G10030,AT3G22520,AT2G38280,AT5G25770,AT1G73190,AT1G29950,AT5G67160,AT5G14540,AT2G21620,AT1G07010,AT4G08170,AT3G15780,AT3G27080,AT5G06440,AT2G19600,AT5G16360,AT1G31817,AT5G49190,AT4G30810,AT5G54660,AT1G14570,AT5G65960,AT1G18270,AT2G01670,AT3G08770,AT2G28790,AT3G54920,AT3G24520,AT4G18610,AT5G39610,AT1G30110,AT1G78290,AT2G42680,AT5G27950,AT3G10340,AT3G04080,AT5G20700,AT2G03070,AT3G07780,AT4G21930,AT3G48780,AT3G54980,AT5G60460,AT1G74710,AT4G19140,AT3G12130,AT3G54200,AT4G30450,AT1G18450,AT2G03890,AT5G25280,AT3G58790,AT4G14130,AT2G29590,AT5G63080,AT1G16510,AT2G40920,AT1G49850,AT5G39660,AT5G61640,AT5G39510,AT5G16730,AT1G12080,AT5G16150,AT5G67420,AT4G39390,AT3G57390,AT1G52690,AT1G70230,AT3G14940,AT3G19640,AT1G10470,AT3G23170,AT4G14910,AT1G63140,AT1G80930,AT1G73740,AT1G64890,AT5G59400,AT1G24090,AT3G01090,AT3G22370,AT1G11820,AT1G65530,AT5G21040,AT1G51590,AT4G34600,AT2G04410,AT4G03260,AT5G03030,AT3G10020,AT5G49660,AT3G53180,AT3G09690,AT1G30720,AT4G34090,AT1G51730,AT5G42500,AT5G55070,AT3G27010,AT1G04990,AT2G36380,AT3G07610,AT5G42810,AT4G09610,AT1G21310,AT5G63160,AT3G52960,AT4G28480,AT3G63380,AT4G01960,AT5G01540,AT3G60650,AT2G36120,AT5G60680,AT3G48100,AT4G34740,AT1G72450,AT2G42210,AT1G30730,AT3G51940,AT4G15550,AT3G58120,AT4G17480,AT3G27100,AT5G66010,AT4G25310,AT3G57260,AT5G04860,AT5G57870,AT5G25754,AT3G21770,AT4G27380,AT4G20930,AT1G70760,AT2G37760,AT3G50690,AT1G07810,AT4G29490,AT3G16170,AT1G61670,AT3G49360,AT5G25265,AT2G04280,AT5G61020,AT1G18170,AT1G17100,AT3G49600,AT1G28140,AT1G34130,AT1G04985,AT2G38190,AT1G77450,AT2G22420,AT3G49840,AT3G57410,AT5G48760,AT5G66410,AT4G10250,AT1G76960,AT2G18440,AT1G03610,AT5G41320,AT3G47430,AT3G15090,AT5G12840,AT4G01100,AT4G00585,AT5G42090,AT1G58270,AT2G45070,AT5G22780,AT5G01750,AT1G79160,AT3G13310,AT1G74500,AT1G45261,AT4G00360,AT3G45010,AT3G48430,AT2G16380,AT4G26080,AT2G27380,AT5G52840,AT5G48545,AT4G04330,AT5G54740,AT1G04120,AT1G66870,AT4G23850,AT1G20670,AT5G36160,AT3G48990,AT5G26940,AT3G15810,AT1G74160,AT3G07020,AT1G56210,AT1G29050,AT1G13210,AT1G24160,AT5G10760,AT2G44730,AT1G64070,AT1G80300,AT2G41160,AT2G40610,AT1G77710,AT4G09960,AT2G03470,AT2G26800,AT5G27700,AT5G61160,AT3G29390,AT2G32910,AT3G02530,AT5G45340,AT1G62820,AT4G33910,AT1G36640,AT3G50440,AT3G15050,AT1G53590,AT2G32240,AT4G17020,AT2G31130,AT3G61850,AT1G59820,AT5G02020,AT5G59880,AT2G31090,AT2G23950,AT5G23190,AT5G40020,AT2G17870,AT2G15320,AT3G59700,AT5G47560,AT5G60980,AT2G27450,AT3G08920,AT5G27380,AT5G08420,AT1G25350,AT5G47720,AT4G10730,AT4G03200,AT4G10000,AT3G22440,AT5G54440,AT3G48880,AT4G29520,AT2G46930,AT4G25680,AT5G07350,AT1G78610,AT5G44100,AT5G07270,AT1G61820,ATMG00690,AT4G30140,AT2G28960,AT4G17090,AT4G36000,AT1G17060,AT2G43340,AT5G57040,AT3G01560,AT3G05560,AT3G62550,AT3G10060,AT1G13245,AT1G35190,AT4G32410,AT1G30890,AT4G38440,AT2G44500,AT1G70550,AT1G11910,AT1G20110,AT3G10740,AT4G34910,AT1G80120,AT4G32910,AT3G45310,AT1G01380,AT4G26420,AT5G58350,AT3G17000,AT3G50810,AT4G15415,AT3G32930,AT1G11410,AT3G60350,AT4G27630,AT2G37630,AT1G79660,AT5G19190,AT4G29030,AT1G29400,AT5G46340,AT1G19180,AT5G29000,AT4G11020,AT3G12400,AT3G02200,AT3G52060,AT3G03890,AT4G24220,AT1G17730,AT5G58005,AT4G30160,AT2G47850,AT5G14040,AT2G19590,AT4G25500,AT3G55120,AT3G16340,AT1G20880,AT2G37150,AT4G05530,AT1G19530,AT5G48570,AT2G43670,AT1G04790,AT3G54140,AT1G62040,AT1G66140,AT2G27810,AT1G43190,AT2G25510,AT1G19680,AT1G35720,AT1G48620,AT5G65170,AT2G44840,AT4G33510,AT1G02130,AT4G35740,AT4G16060,AT3G17510,AT5G49570,AT4G12720,AT5G01450,AT3G15880,AT2G25980,AT4G36960,AT5G60960,AT1G73880,AT5G46020,AT5G27600,AT3G56330,AT5G47200,AT4G29370,AT3G18290,AT1G01430,AT5G59170,AT2G02450,AT4G02700,AT5G13110,AT3G01910,AT5G11840,AT5G66920,AT5G42530,AT2G40150,AT3G18970,AT1G10940,AT5G06300,AT5G44380,AT1G07250,AT4G12970,AT4G35800,AT5G42970,AT5G64430,AT2G02050,AT1G70640,AT3G10860,AT1G67900,AT5G10910,AT1G07000,AT5G52560,AT1G14140,AT2G39470,AT2G02800,AT1G08190,AT3G52200,AT4G13950,AT2G15560,AT1G03106,AT2G34780,AT1G12550,AT1G47960,AT5G13740,AT1G27020,AT4G35410,AT1G31850,AT3G18050,AT1G58440,AT3G15210,AT1G06390,AT5G42250,AT2G36060,AT3G47610,AT1G70160,AT3G06380,AT3G51250,AT5G59870,AT3G08650,AT3G16320,AT1G02950,AT4G13500,AT4G34000,AT3G24503,AT4G26690,AT5G42050,AT2G30040,AT2G17640,AT1G64060,AT1G20380,AT1G65660,AT5G19030,AT5G21060,AT3G13200,AT2G20120,AT3G22235,AT5G37600,AT1G80690,AT5G20060,AT5G53850,AT2G11000,AT1G49750,AT5G06640,AT5G34850,AT1G50900,AT3G24180,AT3G02610,AT5G19890,AT1G69330,AT4G11010,AT1G20696,AT4G02520,AT2G45250,AT5G15020,AT1G13380,AT4G25740,AT4G39680,AT2G16980,AT3G51260,AT5G62150,AT5G21326,AT5G50315,AT1G78860,AT4G32320,AT5G05610,AT3G03120,AT5G07440,AT5G53450,AT4G28890,AT4G02530,AT2G14560,AT5G02230,AT4G13020,AT2G14100,AT1G53780,AT4G11980,AT5G64670,AT1G62220,AT4G15396,AT2G19270,AT3G22231,AT2G18900,AT3G18490,AT5G57130,AT5G40580,AT1G78090,AT1G08340,AT2G28190,AT5G54910,AT3G07650,AT5G18800,AT2G44060,AT1G05000,AT5G22320,AT2G04780,AT3G02890,AT1G25260,AT1G05510,AT3G15360,AT3G11670,AT3G23780,AT1G02860,AT3G46700,AT1G22300,AT3G60830,AT3G10520,AT3G51500,AT3G62010,AT1G16810,AT1G17340,AT3G08940,AT3G28730,AT4G24400,AT2G41100,AT1G75330,AT4G25220,AT3G11100,AT4G08770,AT3G56130,AT1G73080,AT5G47990,AT2G32250,AT1G78310,AT4G28990,AT2G44720,AT3G29810,AT3G56910,AT1G66200,AT5G55915,AT4G22690,AT4G28600,AT4G26320,AT1G65260,AT2G14740,AT5G63510,AT2G17200,AT5G12950,AT3G49910,AT1G65430,AT2G05230,AT2G07050,AT1G34020,AT2G40470,AT5G42200,AT1G32160,AT5G22030,AT3G03250,AT5G57910,AT4G16670,AT5G44120,AT5G13930,AT2G34170,AT2G30770,AT1G27760,AT3G49260,AT2G01880,AT1G65380,AT1G67330,AT5G02530,AT4G21960 ZIMMERLI_BABA/WT-TREATED_DN Downregulated by BABA-treated/water-treated (TableS1 PubmedID:18047473) AT1G75750,AT3G16240,AT5G56500,AT5G61410,AT1G22530,AT5G11070,AT1G74670,AT5G63460,AT2G28800,AT2G05540,AT4G19530,AT3G59970,AT3G19680,AT5G17170,AT4G26530,AT3G01500,ATCG00810,AT3G15110,AT1G62750,AT2G25080,AT1G75350,AT5G58260,AT3G45970,AT4G28240,AT3G15200,AT4G35100,AT3G09300,AT5G07730,AT1G19670,AT4G11175,AT4G13250,AT5G29771,AT5G11420,AT4G16985,AT4G24770,AT5G13630,AT1G77220,AT4G39080,AT4G30690,AT5G44020,AT5G24490,AT1G11860,AT4G34350,AT5G40450,AT1G52300,AT1G62480,AT3G18760,AT1G53750,AT3G13750,AT5G50230,AT5G19770,AT5G57930,AT3G12630,AT2G25450,ATCG00380,AT1G17220,AT1G72610,AT1G71270,AT3G63490,AT1G53210,AT5G61590,AT3G18390,AT3G56090,AT2G25870,AT5G04810,AT2G26500,AT3G26420,AT3G51950,AT3G27310,AT3G16950,AT3G43670,AT5G39740,AT5G48230,AT4G29905,AT1G29660,AT1G75680,AT1G57860,AT5G17710,AT4G01310,AT1G68010,AT2G14890,AT2G18270,AT3G27180,AT2G39940 KRINKE_SA_UP SA-induced by overlaps between clusters regulated positively by NPR1 and either positively or negatively by a n-butanol sensitive pathway in response to SA. (Table SII PubmedID:19304931) AT1G01490,AT1G03330,AT1G03400,AT1G03475,AT1G05300,AT1G08830,AT1G09080,AT1G09180,AT1G09560,AT1G10590,AT1G10960,AT1G11890,AT1G13950,AT1G14200,AT1G15230,AT1G15270,AT1G15380,AT1G15400,AT1G16260,AT1G17020,AT1G17745,AT1G21400,AT1G22990,AT1G24450,AT1G31580,AT1G32210,AT1G34750,AT1G43160,AT1G45145,AT1G51400,AT1G56170,AT1G56190,AT1G58360,AT1G60010,AT1G61780,AT1G62420,AT1G64280,AT1G64850,AT1G66580,AT1G68840,AT1G69490,AT1G70140,AT1G72930,AT1G74520,AT1G78380,AT1G78550,AT1G79040,AT1G79510,AT1G80830,AT2G02800,AT2G03760,AT2G04400,AT2G04630,AT2G04900,AT2G05380,AT2G05520,AT2G05620,AT2G07180,AT2G07640,AT2G13790,AT2G15580,AT2G16430,AT2G16600,AT2G19740,AT2G20610,AT2G21060,AT2G21620,AT2G21640,AT2G22330,AT2G23200,AT2G23810,AT2G24360,AT2G24590,AT2G25000,AT2G25450,AT2G25510,AT2G25720,AT2G26170,AT2G26690,AT2G27510,AT2G27960,AT2G29340,AT2G29420,AT2G29700,AT2G29720,AT2G30000,AT2G30040,AT2G30140,AT2G30250,AT2G30490,AT2G30550,AT2G31090,AT2G31660,AT2G32920,AT2G33220,AT2G33830,AT2G34160,AT2G34690,AT2G36120,AT2G36930,AT2G37120,AT2G37710,AT2G37750,AT2G37760,AT2G37970,AT2G38860,AT2G38870,AT2G38880,AT2G39200,AT2G39270,AT2G39740,AT2G40080,AT2G40410,AT2G40600,AT2G41010,AT2G41090,AT2G41380,AT2G41430,AT2G41650,AT2G42350,AT2G42360,AT2G43510,AT2G43530,AT2G43820,AT2G44180,AT2G44240,AT2G45210,AT2G45570,AT2G46680,AT2G47640,AT2G47730,AT2G47770,AT3G02730,AT3G04720,AT3G08690,AT3G09390,AT3G12120,AT3G13445,AT3G15353,AT3G16720,AT3G17590,AT3G22370,AT3G27890,AT3G28930,AT3G47300,AT3G48030,AT3G48080,AT3G48090,AT3G48140,AT3G48890,AT3G50960,AT3G50970,AT3G52020,AT3G52430,AT3G54420,AT3G54960,AT3G57700,AT3G61430,AT4G00355,AT4G00860,AT4G01026,AT4G01070,AT4G01370,AT4G02380,AT4G02520,AT4G02770,AT4G04620,AT4G04700,AT4G08150,AT4G08390,AT4G10500,AT4G11600,AT4G13180,AT4G13510,AT4G14430,AT4G15610,AT4G15910,AT4G16520,AT4G18360,AT4G18910,AT4G21110,AT4G21120,AT4G21580,AT4G22240,AT4G22310,AT4G22610,AT4G23450,AT4G23470,AT4G23690,AT4G23700,AT4G23890,AT4G24040,AT4G24440,AT4G25170,AT4G25300,AT4G26070,AT4G26130,AT4G26200,AT4G26270,AT4G26550,AT4G26840,AT4G27070,AT4G27260,AT4G27440,AT4G27470,AT4G27710,AT4G28030,AT4G28750,AT4G30960,AT4G31310,AT4G31560,AT4G31790,AT4G31860,AT4G32040,AT4G32930,AT4G33300,AT4G33980,AT4G34630,AT4G34920,AT4G35020,AT4G36040,AT4G36090,AT4G36670,AT4G37830,AT4G37900,AT4G38540,AT4G38550,AT4G38980,AT4G39670,AT5G01650,AT5G03545,AT5G05320,AT5G16400,AT5G25890,AT5G25940,AT5G26340,AT5G35080,AT5G36220,AT5G39950,AT5G42980,AT5G47220,AT5G54140,AT5G61210,AT5G65210,AT5G66040 KRINKE_SA_DN SA-repressed by overlaps between clusters regulated positively by NPR1 and either positively or negatively by a n-butanol sensitive pathway in response to SA. (Table SII PubmedID:19304931) AT1G04430,AT1G04680,AT1G08190,AT1G08650,AT1G09620,AT1G09780,AT1G12920,AT1G16520,AT1G21630,AT1G22880,AT1G23080,AT1G23190,AT1G24510,AT1G25490,AT1G26850,AT1G30620,AT1G30970,AT1G31970,AT1G47670,AT1G50480,AT1G54660,AT1G59820,AT1G60030,AT1G60200,AT1G60780,AT1G61580,AT1G61900,AT1G62290,AT1G62330,AT1G62430,AT1G64790,AT1G68560,AT1G69530,AT1G70090,AT1G70280,AT1G70330,AT1G70710,AT1G71380,AT1G73590,AT1G76490,AT1G79460,AT2G01420,AT2G01630,AT2G01690,AT2G01820,AT2G02480,AT2G03890,AT2G04030,AT2G04780,AT2G05790,AT2G05920,AT2G05990,AT2G16280,AT2G17230,AT2G17480,AT2G18130,AT2G19170,AT2G20750,AT2G20800,AT2G21390,AT2G21410,AT2G22125,AT2G23950,AT2G25330,AT2G25430,AT2G25540,AT2G26680,AT2G26710,AT2G26730,AT2G26760,AT2G27860,AT2G28000,AT2G28520,AT2G28950,AT2G29510,AT2G29980,AT2G30740,AT2G30830,AT2G31400,AT2G31810,AT2G32730,AT2G32990,AT2G34300,AT2G34680,AT2G34850,AT2G35190,AT2G36530,AT2G36570,AT2G36850,AT2G36870,AT2G36910,AT2G38120,AT2G38650,AT2G38840,AT2G39750,AT2G39800,AT2G41480,AT2G41820,AT2G41830,AT2G42100,AT2G42320,AT2G42570,AT2G42580,AT2G43360,AT2G43710,AT2G44500,AT2G44830,AT2G45400,AT2G45440,AT2G45470,AT2G46370,AT2G46420,AT2G46590,AT2G47860,AT3G01090,AT3G02830,AT3G09440,AT3G11520,AT3G13920,AT3G14310,AT3G16840,AT3G19100,AT3G24660,AT3G24800,AT3G25800,AT3G26730,AT3G30775,AT3G51670,AT3G51950,AT3G52500,AT3G54810,AT3G57660,AT3G60030,AT3G62830,AT4G00570,AT4G01050,AT4G01850,AT4G02010,AT4G02150,AT4G02290,AT4G03100,AT4G04910,AT4G12420,AT4G12530,AT4G12730,AT4G13700,AT4G14160,AT4G18030,AT4G19120,AT4G20890,AT4G21350,AT4G22010,AT4G22130,AT4G22330,AT4G23740,AT4G24740,AT4G24780,AT4G25870,AT4G26650,AT4G26690,AT4G27020,AT4G27720,AT4G27840,AT4G30210,AT4G30270,AT4G31000,AT4G31820,AT4G32060,AT4G32140,AT4G32290,AT4G32410,AT4G32640,AT4G33380,AT4G33730,AT4G34980,AT4G35300,AT4G35830,AT4G36010,AT4G36080,AT4G36160,AT4G36400,AT4G36520,AT4G37450,AT4G37590,AT4G37750,AT4G38050,AT4G38400,AT4G38660,AT4G39170,AT4G39350,AT4G39840,AT5G02490,AT5G02500,AT5G04870,AT5G05170,AT5G12250,AT5G15350,AT5G15650,AT5G18280,AT5G22500,AT5G23860,AT5G26360,AT5G26850,AT5G40150,AT5G46280,AT5G49720,AT5G52310,AT5G60920,AT5G62350,AT5G64120,AT5G65310,AT5G65670,AT5G67360,ATCG00480 KRINKE_NB-TREATMENT_SA_DIFF SA-regulated genes most influenced by NB treatment, ranked by decreasing degree of repression or induction by NB (Table II PubmedID:19304931) AT1G31580,AT1G66970,AT1G80590,AT5G22570,AT5G26690,AT3G28540,AT1G17745,AT4G31500,AT1G19960,AT1G34750,AT1G66580,AT2G15490,AT3G50970,AT4G30660,AT4G24440,AT2G39725,AT2G36120,AT1G15230,AT3G06760,AT1G56170,AT5G42090,AT1G72150,AT4G04040,AT5G05170,ATCG00740,AT3G30390,ATCG00830,AT3G49990,AT4G12650,ATCG00480 BOUCHABKE-COUSSA_ESK1-5/WT(RATIO>25)_UP_WT_DN Genes more than 5 x over expressed in esk1-5 than in wild type (ratio > 2,5) and weakly expressed in wild type (File 1 PubmedID:19061521) AT3G51860,AT5G15500,AT5G17220,AT5G42800,AT3G28220,AT1G52000,AT2G32870,AT1G52030,AT5G23020,AT5G07990,AT1G18710,AT5G03545,AT2G46680,AT1G52410,AT5G53450,AT4G11130,AT5G10760,AT3G57260 BOUCHABKE-COUSSA_ESK1-5/WT(15 2 and a P value < 0.01 in at least one time point during early flower development are shown. (Tables4 PubmedID:18952771) AT1G01110,AT1G02730,AT1G03080,AT1G03270,AT1G03410,AT1G04080,AT1G04160,AT1G05640,AT1G05790,AT1G06710,AT1G06840,AT1G07300,AT1G08970,AT1G09060,AT1G10270,AT1G10640,AT1G10930,AT1G11720,AT1G12470,AT1G12700,AT1G13560,AT1G14850,AT1G16270,AT1G16630,AT1G17230,AT1G18260,AT1G18340,AT1G19220,AT1G20060,AT1G22660,AT1G22910,AT1G23480,AT1G25350,AT1G26330,AT1G26620,AT1G27880,AT1G27980,AT1G29470,AT1G29900,AT1G30200,AT1G30400,AT1G31230,AT1G31810,AT1G32120,AT1G32415,AT1G33350,AT1G34130,AT1G48210,AT1G49760,AT1G51310,AT1G52080,AT1G52630,AT1G52780,AT1G53200,AT1G53230,AT1G53390,AT1G55750,AT1G56040,AT1G56500,AT1G59890,AT1G60680,AT1G60800,AT1G62110,AT1G63630,AT1G63670,AT1G64790,AT1G65180,AT1G65342,AT1G65420,AT1G67480,AT1G67900,AT1G67960,AT1G68400,AT1G68720,AT1G68790,AT1G68930,AT1G69040,AT1G69610,AT1G69860,AT1G71220,AT1G71360,AT1G71460,AT1G71840,AT1G72840,AT1G73500,AT1G73660,AT1G73860,AT1G73960,AT1G74030,AT1G74720,AT1G75210,AT1G76850,AT1G77410,AT1G77500,AT1G78910,AT1G79190,AT1G79570,AT1G80310,AT1G80440,AT1G80670,AT2G01210,AT2G01440,AT2G01650,AT2G03070,AT2G03880,AT2G04160,AT2G16660,AT2G16800,AT2G17470,AT2G17620,AT2G17820,AT2G20000,AT2G20040,AT2G20100,AT2G20580,AT2G21710,AT2G22010,AT2G23300,AT2G24490,AT2G24640,AT2G25320,AT2G25530,AT2G25660,AT2G27060,AT2G27200,AT2G27210,AT2G28470,AT2G29525,AT2G29710,AT2G30110,AT2G30590,AT2G31070,AT2G31320,AT2G31370,AT2G32700,AT2G34780,AT2G35110,AT2G37320,AT2G37520,AT2G38940,AT2G39750,AT2G40095,AT2G40300,AT2G40460,AT2G41835,AT2G42600,AT2G43150,AT2G44520,AT2G45270,AT2G45670,AT2G45810,AT2G47250,AT2G47330,AT3G01100,AT3G01120,AT3G02050,AT3G02320,AT3G03300,AT3G03790,AT3G07140,AT3G07470,AT3G07650,AT3G08530,AT3G08670,AT3G10500,AT3G10690,AT3G10720,AT3G10740,AT3G11080,AT3G11130,AT3G11720,AT3G12610,AT3G13080,AT3G13100,AT3G13225,AT3G13560,AT3G13682,AT3G13790,AT3G13960,AT3G15380,AT3G16910,AT3G17700,AT3G18290,AT3G18310,AT3G19510,AT3G21250,AT3G21650,AT3G22380,AT3G22780,AT3G24495,AT3G24630,AT3G24690,AT3G25410,AT3G26085,AT3G27530,AT3G29400,AT3G33530,AT3G42640,AT3G43240,AT3G44340,AT3G44690,AT3G46960,AT3G46980,AT3G46990,AT3G49150,AT3G50050,AT3G51670,AT3G51895,AT3G52640,AT3G53930,AT3G54220,AT3G54460,AT3G54750,AT3G54960,AT3G56040,AT3G59140,AT3G59210,AT3G59950,AT3G60750,AT3G61130,AT4G00490,AT4G00660,AT4G00900,AT4G01370,AT4G01860,AT4G02260,AT4G02420,AT4G02680,AT4G05160,AT4G07960,AT4G08395,AT4G11230,AT4G13340,AT4G13345,AT4G13350,AT4G14180,AT4G14770,AT4G15510,AT4G15810,AT4G15880,AT4G15975,AT4G16070,AT4G16120,AT4G16250,AT4G16990,AT4G17000,AT4G17570,AT4G20060,AT4G20270,AT4G20940,AT4G21060,AT4G21550,AT4G21820,AT4G22756,AT4G23190,AT4G23990,AT4G24020,AT4G24560,AT4G24610,AT4G25160,AT4G25540,AT4G25880,AT4G25980,AT4G26100,AT4G26540,AT4G27560,AT4G27910,AT4G28860,AT4G29940,AT4G30110,AT4G30150,AT4G30870,AT4G30900,AT4G31250,AT4G31980,AT4G32840,AT4G35830,AT4G36925,AT4G38750,AT4G39400,AT5G03670,AT5G04885,AT5G04930,AT5G04940,AT5G06580,AT5G09590,AT5G10790,AT5G11040,AT5G11060,AT5G13480,AT5G13870,AT5G13950,AT5G14540,AT5G14880,AT5G16280,AT5G17680,AT5G18230,AT5G18410,AT5G18720,AT5G18750,AT5G18830,AT5G19460,AT5G20320,AT5G20610,AT5G22220,AT5G22690,AT5G23690,AT5G24970,AT5G25510,AT5G26040,AT5G26240,AT5G27030,AT5G27540,AT5G27610,AT5G27650,AT5G27860,AT5G27950,AT5G35630,AT5G36210,AT5G37190,AT5G40840,AT5G40850,AT5G40890,AT5G40910,AT5G41150,AT5G42480,AT5G43900,AT5G44090,AT5G45110,AT5G45250,AT5G46280,AT5G46330,AT5G46450,AT5G46915,AT5G47140,AT5G47480,AT5G48740,AT5G49160,AT5G49430,AT5G49580,AT5G49660,AT5G49760,AT5G49900,AT5G49930,AT5G51070,AT5G51270,AT5G51300,AT5G51710,AT5G53010,AT5G54260,AT5G54440,AT5G54510,AT5G54520,AT5G55400,AT5G55840,AT5G56040,AT5G56730,AT5G57460,AT5G59430,AT5G60930,AT5G61990,AT5G62050,AT5G63770,AT5G64290,AT5G64970,AT5G65110,AT5G65700,AT5G66470,AT5G67420 KURIHARA_AGI-ANNOTATED_UPF1-1_UP AGI-annotated transcripts up-regulated >1.8-fold in upf1-1 (Table S1 PubmedID:19181858) AT1G01060,AT1G01860,AT1G02010,AT1G05680,AT1G06150,AT1G06550,AT1G07010,AT1G07640,AT1G12750,AT1G14560,AT1G15165,AT1G18030,AT1G18570,AT1G21160,AT1G27760,AT1G29950,AT1G31910,AT1G32940,AT1G34270,AT1G36730,AT1G45160,AT1G49350,AT1G49790,AT1G50180,AT1G50300,AT1G50440,AT1G51370,AT1G55910,AT1G56350,AT1G58160,AT1G59620,AT1G63230,AT1G64140,AT1G64570,AT1G65840,AT1G66540,AT1G68890,AT1G70505,AT1G70790,AT1G71696,AT1G71810,AT1G72050,AT1G73170,AT1G73750,AT1G74170,AT1G74370,AT1G77840,AT1G78450,AT1G78690,AT1G78960,AT2G01100,AT2G01330,AT2G01390,AT2G04430,AT2G04450,AT2G06005,AT2G13790,AT2G14610,AT2G18560,AT2G18680,AT2G20830,AT2G21370,AT2G24520,AT2G28605,AT2G32295,AT2G37630,AT2G38185,AT2G38330,AT2G41000,AT2G41080,AT2G41240,AT2G42955,AT2G44850,AT2G45880,AT2G46320,AT2G47160,AT2G47490,AT2G48000,AT3G02830,AT3G03360,AT3G06210,AT3G08730,AT3G09600,AT3G13190,AT3G15354,AT3G17830,AT3G18000,AT3G18500,AT3G20080,AT3G20120,AT3G21390,AT3G23790,AT3G24070,AT3G25430,AT3G26540,AT3G26730,AT3G26950,AT3G27940,AT3G29410,AT3G33530,AT3G45443,AT3G47390,AT3G51110,AT3G51630,AT3G53240,AT3G53400,AT3G53830,AT3G54910,AT3G56080,AT3G56300,AT3G56330,AT3G56840,AT3G56970,AT3G56980,AT3G58940,AT3G59780,AT3G60310,AT4G00590,AT4G00880,AT4G03060,AT4G03260,AT4G03635,AT4G05040,AT4G07825,AT4G09180,AT4G09490,AT4G11000,AT4G13810,AT4G15260,AT4G15440,AT4G18270,AT4G19110,AT4G23050,AT4G24080,AT4G24790,AT4G24810,AT4G25270,AT4G25600,AT4G26520,AT4G26555,AT4G26850,AT4G30680,AT4G30960,AT4G32270,AT4G33470,AT4G34020,AT4G34140,AT4G34310,AT4G36840,AT4G39620,AT5G01450,AT5G01510,AT5G01810,AT5G02480,AT5G02650,AT5G06180,AT5G07130,AT5G08030,AT5G08510,AT5G08710,AT5G09460,AT5G15950,AT5G16540,AT5G17240,AT5G17670,AT5G19400,AT5G20070,AT5G20220,AT5G20410,AT5G23490,AT5G24210,AT5G26270,AT5G27390,AT5G36940,AT5G37260,AT5G38590,AT5G43930,AT5G44600,AT5G45430,AT5G45650,AT5G47790,AT5G47880,AT5G48110,AT5G48330,AT5G48440,AT5G49500,AT5G50180,AT5G51050,AT5G51540,AT5G52550,AT5G53450,AT5G53900,AT5G56990,AT5G59780,AT5G64340,AT5G65450,AT5G66005,AT5G67610,AT1G01448,AT1G07728,AT1G17255,AT1G33415,AT1G34844,AT1G48315,AT1G51645,AT1G60505,AT1G60525,AT1G60545,AT1G67792,AT1G69252,AT1G72855,AT1G78265,AT2G06002,AT2G24755,AT2G32795,AT2G35738,AT2G36792,AT2G42247,AT3G01142,AT3G04485,AT3G26612,AT3G27990,AT3G56408,AT3G63445,AT4G04221,AT4G26795,AT4G37432,AT5G53048,AT5G54569,AT2G10410,AT2G13970,AT3G42658,AT4G04293,AT4G28900,AT5G28626,AT5G35777,AT1G66725 KURIHARA_AGI-ANNOTATED_UPF3-1_UP AGI-annotated transcripts up-regulated >1.8-fold in upf3-1 (Table S2 PubmedID:19181858) AT1G01060,AT1G01860,AT1G05160,AT1G06150,AT1G07010,AT1G07640,AT1G10610,AT1G12750,AT1G14030,AT1G15165,AT1G18773,AT1G29950,AT1G32940,AT1G34270,AT1G36730,AT1G50440,AT1G51370,AT1G53780,AT1G53785,AT1G55910,AT1G58160,AT1G59620,AT1G64140,AT1G64430,AT1G65840,AT1G66540,AT1G67300,AT1G70790,AT1G71810,AT1G74170,AT1G78450,AT1G78960,AT2G01330,AT2G04430,AT2G04450,AT2G18050,AT2G18560,AT2G35130,AT2G37630,AT2G38330,AT2G38460,AT2G43700,AT2G44850,AT2G45770,AT2G45920,AT2G47490,AT2G48000,AT3G02060,AT3G02370,AT3G03360,AT3G06210,AT3G08720,AT3G08730,AT3G09550,AT3G18000,AT3G18500,AT3G20080,AT3G20120,AT3G20620,AT3G21390,AT3G24070,AT3G26080,AT3G26540,AT3G26950,AT3G45443,AT3G46370,AT3G53240,AT3G53400,AT3G56300,AT3G56840,AT3G58940,AT3G60310,AT4G00590,AT4G03060,AT4G03260,AT4G07825,AT4G11000,AT4G13810,AT4G15260,AT4G15440,AT4G18270,AT4G19110,AT4G19160,AT4G23050,AT4G24810,AT4G25270,AT4G25290,AT4G25600,AT4G26520,AT4G26555,AT4G26850,AT4G27820,AT4G30680,AT4G30960,AT4G31870,AT4G32270,AT4G33470,AT4G34020,AT4G36840,AT5G01450,AT5G01670,AT5G01810,AT5G02650,AT5G03406,AT5G04620,AT5G06770,AT5G08510,AT5G09460,AT5G09670,AT5G10140,AT5G10690,AT5G15410,AT5G15950,AT5G16540,AT5G17670,AT5G19400,AT5G20220,AT5G23380,AT5G24090,AT5G36940,AT5G37260,AT5G38590,AT5G41130,AT5G45430,AT5G47790,AT5G47880,AT5G48440,AT5G52120,AT5G52550,AT5G53900,AT5G54520,AT5G55100,AT5G56990,AT5G60700,AT5G61930,AT5G64340,AT5G65450,AT5G66005,AT1G01448,AT1G07728,AT1G11175,AT1G33415,AT1G34844,AT1G48315,AT1G51645,AT1G56612,AT1G60505,AT1G60545,AT1G67792,AT1G69252,AT1G72855,AT1G80325,AT2G24755,AT2G35945,AT2G36792,AT3G26612,AT3G27990,AT3G56408,AT3G63445,AT4G37432,AT5G43403,AT5G53048,AT5G54569,AT2G13970,AT2G13975,AT4G04293,AT5G28626 KURIHARA-MLNCRNAS_AGI_WT_UPF1-1_DIFF AGI mlncRNAs expressed in wild type or upf1-1 (Table S3 PubmedID:19181858) AT1G01448,AT1G04295,AT1G07119,AT1G07728,AT1G11592,AT1G17255,AT1G22403,AT1G24148,AT1G33415,AT1G34844,AT1G48315,AT1G51645,AT1G56612,AT1G60505,AT1G60525,AT1G60545,AT1G67792,AT1G69252,AT1G72855,AT1G78265,AT2G06002,AT2G13665,AT2G15128,AT2G24755,AT2G32795,AT2G35738,AT2G35945,AT2G36792,AT2G42247,AT2G42485,AT2G44798,AT2G45023,AT3G01142,AT3G04485,AT3G24518,AT3G26612,AT3G27990,AT3G45638,AT3G46658,AT3G48115,AT3G56408,AT3G57157,AT3G59778,AT3G63445,AT4G03935,AT4G04221,AT4G06701,AT4G13495,AT4G26795,AT4G37432,AT5G03285,AT5G09443,AT5G24735,AT5G36002,AT5G43403,AT5G53048,AT5G54569,AT1G11175,AT1G46554,AT1G67105,AT1G67328,AT1G69587,AT1G77138,AT1G80325,AT2G09795,AT2G33051,AT2G42365,AT3G52072,AT3G52535,AT4G14548,AT5G01175,AT5G01595,AT5G18255,AT5G43725,AT1G10682,AT1G18415,AT1G26208,AT1G67365,AT1G75295,AT1G76878,AT2G14115,AT2G21187,AT2G21188,AT2G22821,AT2G23672,AT2G26355,AT2G30362,AT2G31585,AT2G44255,AT2G46192,AT3G21755,AT3G22121,AT3G51075,AT3G51238,AT3G62895,AT4G08035,AT4G12917,AT4G26095,AT4G31248,AT5G05435,AT5G06865,AT5G18245,AT5G41612,AT5G48775,AT5G59732,AT5G64572,AT5G66558,AT1G11185,AT1G13448,AT1G16489,AT1G29357,AT1G31935,AT1G34418,AT1G58590,AT1G74088,AT2G07042,AT2G13431,AT2G15555,AT2G18440,AT2G18735,AT2G41312,AT2G43375,AT2G45315,AT3G01202,AT3G06125,AT3G12965,AT3G13061,AT3G13277,AT3G14172,AT3G18535,AT3G52605,AT4G01593,AT4G13505,AT4G15242,AT4G17098,AT4G38545,AT4G40065,AT5G15845,AT5G19221,AT5G28262,AT5G63195,AT5G67488,AT1G15175,AT1G26218,AT1G29785,AT1G69572,AT1G76892,AT3G05905,AT3G07215,AT4G20362,AT4G26488,AT4G36648,AT5G07322 KURIHARA_AGI-MLNCRNAS_WT_UPF3-1_DIFF AGI mlncRNAs expressed in wild type or upf3-1 (Table S4 PubmedID:19181858) AT1G01448,AT1G07728,AT1G11175,AT1G11592,AT1G22403,AT1G24148,AT1G33415,AT1G34844,AT1G48315,AT1G51645,AT1G56612,AT1G60505,AT1G60525,AT1G60545,AT1G67105,AT1G67792,AT1G69252,AT1G69587,AT1G72855,AT1G78265,AT1G80325,AT2G06002,AT2G07042,AT2G24755,AT2G32795,AT2G35738,AT2G35945,AT2G36792,AT3G04485,AT3G24518,AT3G26612,AT3G27990,AT3G46668,AT3G48115,AT3G52072,AT3G56408,AT3G57157,AT3G63445,AT4G03935,AT4G06701,AT4G13495,AT4G37432,AT4G38215,AT5G09443,AT5G24735,AT5G36002,AT5G43403,AT5G53048,AT5G54569,AT1G04295,AT1G46554,AT1G52347,AT1G67328,AT2G09795,AT2G15128,AT2G26355,AT2G42485,AT2G44255,AT2G44798,AT3G21755,AT3G46658,AT3G52535,AT3G59778,AT4G26095,AT4G26795,AT4G37225,AT5G18255,AT5G65575,AT1G13448,AT1G16489,AT1G18415,AT1G26208,AT1G29357,AT1G75295,AT1G76878,AT1G77138,AT2G13665,AT2G15555,AT2G21188,AT2G23672,AT2G24545,AT2G31585,AT2G33815,AT2G42247,AT2G42365,AT3G01142,AT3G06125,AT3G18535,AT3G22121,AT3G29644,AT4G04221,AT4G12917,AT4G13505,AT4G14548,AT4G25719,AT4G31248,AT4G38545,AT5G01175,AT5G01595,AT5G03285,AT5G05435,AT5G06865,AT5G15845,AT5G43725,AT5G48775,AT5G59732,AT5G64572,AT1G10682,AT1G15175,AT1G29785,AT1G34418,AT1G53801,AT1G58590,AT1G67365,AT1G71528,AT1G74088,AT1G76892,AT2G14115,AT2G18440,AT2G18735,AT2G22821,AT2G41312,AT2G43375,AT2G45315,AT2G46192,AT3G13061,AT3G13277,AT3G51075,AT3G52605,AT3G54625,AT3G62895,AT4G01593,AT4G08035,AT4G17098,AT4G40065,AT5G18245,AT5G19221,AT5G41612,AT5G63195,AT5G66558,AT1G11185,AT1G26218,AT1G31935,AT1G69572,AT2G21187,AT2G30362,AT3G05905,AT3G07215,AT3G12965,AT3G14172,AT4G15242,AT4G26488,AT4G36648,AT5G07322,AT5G28262,AT5G67488,AT2G13431,AT4G20362,AT1G65230 KAKIZAKI_PPI2-1-TAG_DN Down-regulated tags in ppi2-1. (Table S1 PubmedID:19726569) AT3G01500,AT4G12800,AT1G20620,AT1G29930,AT3G27690,AT4G25100,AT5G42530,AT1G60950,AT5G01530,AT4G04640,AT1G64720,AT5G41700,AT2G33830,AT1G15810,AT4G20360,AT4G23600,AT1G52300,AT5G64040,AT1G30380,AT5G51720,AT1G29910,AT3G47470,AT5G02960,AT1G06460,AT2G05070,AT2G39010,AT3G16250,AT4G16980,AT2G25510,AT1G18730,AT2G42530,AT2G38170,AT3G17390,AT1G31580,AT1G22890,AT3G26060,AT1G76200,AT2G34420,AT3G54890,AT2G34430,AT4G05070,AT1G01170,AT3G03150,AT1G51400,AT5G65480,AT4G27440,AT4G05180,AT5G19240,AT5G21430,AT1G35680,AT1G56340,AT3G11410,AT5G66570,AT1G15270,AT2G30570,AT2G36830,AT5G02790,AT1G29660,AT4G17530,AT1G44446,AT5G06290,AT5G05560,AT4G13500,AT1G17290,AT3G28940,AT5G38410,AT1G76960,AT4G17040,AT4G10340,AT1G69510,AT1G69390,AT5G01350,AT2G46490,AT3G25770,AT4G13340,AT2G28840,AT2G34620,AT1G15820,AT5G54270,AT1G66100,AT5G06320,AT3G18890,AT3G61470,AT1G80600,AT1G11260,AT4G02890,AT2G02130,AT4G02770,AT3G16370,AT5G20700,AT5G20500,AT1G57720,AT2G24850,AT1G48030,AT4G38770,AT1G66970,AT1G23960,AT5G04490,AT3G14620,AT1G20340,AT4G11211,AT1G03130,AT1G52400,AT3G52960,AT1G19150,AT1G20260,AT5G46290,AT4G31530,AT1G04640,AT1G56220,AT5G54770,AT5G48490,AT1G02340,AT4G34830,AT1G62780,AT2G43030,AT2G21330,AT5G43750,AT1G29700,AT5G63800,AT5G38520,AT1G56300,AT1G55670,AT5G57345,AT2G18460,AT1G52720,AT5G54940,AT1G08630,AT5G03350,AT3G21055,AT4G10960,AT2G10940,AT4G14400,AT1G04270,AT1G80440,AT2G32560,AT5G13410,AT5G53120,AT5G64860,AT1G08880,AT4G14360,AT5G36700,AT2G47890,AT1G32060,AT1G22630,AT2G20570,AT1G48310,AT2G26500,AT3G08940,AT4G21560,AT5G27150,AT5G23060,AT2G39870,AT1G14700,AT2G47880,AT5G65840,AT1G27130,AT4G01690,AT1G67840,AT1G52230,AT4G12830,AT1G24510,AT1G79040,AT5G12050,AT4G35490,AT3G62700,AT5G19550,AT3G55240,AT1G49650,AT5G48790,AT2G29290,AT1G24100,AT1G72900,AT1G23130,AT3G62410,AT5G25980,AT5G57660,AT5G42980,AT4G13010,AT4G24090,AT1G77760,AT4G01900,AT2G26740,AT2G38820,AT5G04550,AT2G39800,AT3G30390,AT1G27100,AT1G67740,AT1G57860,AT1G78915,AT1G56510,AT4G33500,AT2G02070,AT4G33300,AT1G66240,AT3G46630,AT1G06080,AT4G18520,AT1G29920,AT5G02760,AT5G02380,AT5G39050,AT1G61620,AT1G68190,AT1G61520,AT5G24780,AT1G65190,AT2G39140,AT1G44575,AT5G45390,AT4G14716,AT2G35490,AT1G59840,AT5G43470,AT4G15510,AT5G35740,AT5G22500,AT1G51500,AT2G42540,AT1G71480,AT4G23890,AT3G26610,AT4G01130,AT3G62475,AT5G56030,AT4G32770,AT5G10180,AT1G11280,AT3G16000,AT3G26070,AT4G21280,AT5G46110,AT4G06738,AT5G55570,AT3G45310,AT3G10520,AT5G03930,AT1G78670,AT1G23950,AT1G48380,AT4G00030,AT1G78070,AT5G24210,AT4G02510,AT5G41520,AT3G60750,AT1G25098,AT2G02080,ATCG01040,AT3G14310,ATCG00440,AT5G56940,AT4G36410,AT5G45430,AT1G58684,AT2G15290,AT1G12780,AT3G63490,AT3G27925,AT1G24050,AT5G43450,AT5G62220,AT2G29650,AT5G09860,AT2G38950,AT1G03210,AT1G31330,AT4G12980,AT1G06680,AT1G11850,AT2G06850,AT1G47640,AT3G14110,AT1G11790,AT1G26390,AT1G02710,AT3G13800,AT1G44920,AT1G30910,AT5G13630,AT1G53000,AT5G48760,AT4G26555,AT5G54280,AT2G31040,AT2G39470,AT3G54050,AT5G38420,AT3G10060,AT1G67090,AT1G03630,AT3G16130,AT1G68520,AT1G14880,AT5G08410,AT4G26530,AT5G57040,AT5G47240,AT3G14420,AT5G14740,AT5G02120,AT1G08550,AT1G14345,AT5G37360,AT4G19170,AT3G57260,AT1G50910,AT1G01790,AT2G42220,AT1G59900,AT1G21640,AT1G42970,AT3G53990,AT2G13360,AT2G39730,AT3G22231,AT3G62630,AT2G32500,AT5G16400,AT3G02480,AT4G25080,AT5G42070,AT3G55800,AT4G33010,AT2G42870,AT2G36145,AT4G29590,AT5G17990,ATCG00020,AT2G24090,AT1G15980,AT1G25440,AT2G33800,AT1G23390,AT5G39530,AT1G21500,AT4G37925,AT5G19230,AT2G46820,AT1G43670,AT1G12900,AT1G76100,AT5G10860,AT3G51820,AT4G34290,AT2G47400,AT1G51090,AT3G25530,AT1G24147,AT1G03600,AT1G01080,AT4G27410,AT3G02730,AT3G56940,AT1G32080,ATCG00450,AT1G16080,AT3G50820,AT1G76490,AT2G01110,AT1G77580,AT3G56090,AT2G21530,AT2G34470,AT4G36810,AT4G30710,AT1G14150,AT2G20260,AT5G44680,AT1G58290,AT3G14930,AT1G20020,AT1G54780,AT1G70820,AT3G62660,AT4G01050,AT1G51200,AT5G46390,AT1G13260,AT5G49630,AT1G74730,AT5G54960,AT1G01910,AT2G36895,AT5G48880,AT1G76800,AT4G35790,AT1G32550,AT5G57340,AT5G66530,AT5G07020,AT1G21760,AT1G78890,AT3G19680,AT2G24830,AT1G04350,AT2G47060,AT5G13770,AT1G70280,AT2G21340,AT3G16140,AT1G07050,AT3G63140,AT5G35480,AT1G73655,AT5G40500,ATCG01180,AT2G23130,AT1G74470,AT5G12860,AT4G09010,AT5G27560,AT2G32100,AT1G32470,AT4G22890,AT1G12090,AT3G06070,AT2G42750,AT5G19220,AT4G15560,AT4G34220,AT1G75460,AT3G51510,AT2G20725,AT1G21830,AT1G64150,AT3G18490,AT5G60850,AT2G47450,AT3G05640,AT5G06870,AT2G43920,AT5G46690,AT4G12790,AT2G22230,AT5G17630,AT5G62790,AT1G32990,AT4G38740,AT5G42270,AT1G11860,AT5G58140,AT5G60680,AT5G66470,AT3G24430,AT2G44870,AT2G04270,AT1G02090,AT5G53450,AT1G27385,AT3G19490,AT5G14060,AT2G01590,AT4G03280,AT4G28080,AT4G17090,AT4G37930,AT1G75690,AT5G01595,AT1G20850,AT2G45740,AT3G26740,AT1G79850,AT3G61820,AT2G05310,AT3G02570,AT5G66190,AT5G44260,AT3G55250,AT4G38970,AT5G24930,AT1G09340,AT1G52220,AT5G28500,AT5G19190,ATCG00300,AT2G21195,AT1G03160,AT4G34090,AT5G47770,AT5G16030,AT3G10420,AT3G61580,AT1G48350,AT1G64510,AT2G45470,AT5G67030,AT1G32220,AT5G65360,AT1G17990,AT5G08650,AT4G18480,AT1G69740,AT5G38510,AT4G32590,AT1G73060,AT3G42790,AT1G32070,AT5G03650,AT1G72030,AT3G08920,AT5G59250,AT1G79505,AT1G03680,AT5G66090,AT3G15360,AT2G35370,AT4G17560,AT2G41770,AT4G13220,AT5G35170,AT4G27820,AT3G61870,AT4G21445,AT4G37000,AT2G26080,AT1G77090,AT1G65260,AT1G68830,AT5G23235,AT1G23740,AT3G11630,AT1G74670,AT3G15840,AT5G50920,AT1G70760,AT2G30950,AT1G68590,AT4G32260,AT5G03880,AT5G55220,ATCG00480,AT3G10130,AT2G23670,AT3G04210,AT4G36530,AT1G64770,AT1G72450,AT4G37200,AT2G21970,AT1G14280,AT3G15570,AT1G19350,AT4G18740,AT3G56290,AT1G43560,AT4G11570,AT5G06839,AT3G44020,AT4G36090,AT3G63410,AT4G29070,AT5G15980,AT1G50670,AT3G56710,AT1G51610,AT5G04260,AT5G65220,AT4G18240,AT1G29070,AT5G67480,AT1G76080,AT5G27280,AT5G24490,AT2G05620,AT2G15960,AT2G28800,AT3G12780,AT4G03520,AT3G52072,AT1G78630,AT2G24060,AT5G35630,AT5G16710,AT3G17930,AT2G40300,AT2G20270,AT1G74070,AT3G28860,AT2G15570,AT2G40510,AT3G60590,AT2G18300,AT2G14560,AT1G79790,AT3G60810,AT3G62030,AT5G14260,AT1G45474,AT5G60600,AT5G09660,AT2G25080,AT3G47490,AT2G15695,AT1G56190,AT3G62550,AT5G19750,AT5G14970,AT5G47190,AT5G61410,AT4G24770,AT2G46330,AT5G55450,AT2G36990,AT3G59780,AT2G34860 KAKIZAKI_PPI2-1-TAG_UP Up-regulated tags in ppi2-1. (Table S2 PubmedID:19726569) AT4G11650,AT5G01350,AT1G07610,AT5G37740,AT1G29660,AT5G39050,AT3G12500,AT4G14615,AT1G17020,AT5G01740,AT1G02870,AT5G18840,AT4G23680,AT1G47260,AT2G37250,AT2G26400,AT3G13110,AT2G15000,AT4G34030,AT5G17330,AT4G03020,AT3G13230,AT3G22370,AT2G33210,AT1G47640,AT4G36380,AT1G73260,AT5G43460,AT4G30170,AT3G22970,AT1G20260,AT1G76810,AT1G02890,AT2G38550,AT5G37260,AT3G51860,AT3G16640,AT5G26667,AT3G24170,AT1G55810,AT4G16670,AT3G53630,AT2G46505,AT5G23535,AT3G45730,AT5G20150,AT3G16720,AT3G04230,AT5G20590,AT5G67360,AT3G28500,AT4G13970,AT1G76930,AT5G13370,AT3G21690,AT4G23870,AT3G19030,AT2G25000,AT1G24350,AT5G01090,AT1G41880,AT2G28520,AT4G34710,AT1G05300,AT4G26780,AT5G60250,AT2G37340,AT4G17790,AT1G43130,AT5G43570,AT2G21640,AT3G02220,AT4G15900,AT5G62930,AT1G62300,AT1G67800,AT1G25260,AT5G55200,AT4G17830,AT5G48180,AT1G77760,AT4G33420,AT5G55180,AT4G20860,AT2G26210,AT5G28626,AT3G25140,AT1G64710,AT1G26340,AT5G41350,AT1G19380,AT1G72830,AT5G25757,AT4G27652,AT2G25610,AT1G07630,AT5G53730,AT5G08590,AT2G39460,AT2G34640,AT5G65750,AT1G55020,AT4G18360,AT2G29350,AT5G60160,AT5G12950,AT1G09530,AT5G40690,AT1G28600,AT5G43330,AT2G35610,AT4G15680,AT1G14320,AT1G64040,AT5G05000,AT3G17900,AT2G07050,AT3G48115,AT4G26240,AT5G17760,AT5G59150,AT3G20100,AT4G14440,AT5G54490,AT1G80160,AT5G64620,AT1G02160,AT1G76050,AT3G22660,AT3G10530,AT4G02380,AT3G08860,AT5G20660,AT5G65480,AT1G19600,AT1G20620,AT3G44300,AT4G12470,AT3G04720,AT2G16060,AT3G20470,AT1G24100,AT3G05730,AT1G65500,AT1G21310,AT1G75750,AT5G56010,AT3G49120,AT1G43910,AT4G25000,AT3G27240,AT3G16400,AT4G30270,AT5G11520,AT5G19550,AT4G20890,AT5G54900,AT2G36530,AT3G44720,AT2G27510,AT1G22890,AT2G37760,AT5G42090,AT5G64120,AT1G55450,AT4G00400,AT5G49440,AT4G02940,AT5G08690,AT4G36648,AT5G54760,AT2G41730,AT5G36230,AT5G13420,AT5G56940,AT5G61455,AT5G28060,AT1G77840,AT3G30775,AT1G70890,AT1G17745,AT3G62820,AT1G52200,AT4G38420,AT1G17840,AT5G41520,AT5G56150,AT4G17530,AT4G21620,AT1G69510,AT5G47200,AT4G12600,AT4G24000,AT4G23760,AT3G05165,AT5G20700,AT4G17870,AT3G19660,AT4G30280,AT1G69530,AT4G04890,AT3G60600,AT3G51600,AT2G22122,AT3G04070,AT3G16420,AT4G37870,AT2G13431,AT1G09815,AT5G49760,AT3G26280,AT2G40290,AT4G21570,AT5G10480,AT1G76200,AT1G57660,AT1G70830,AT3G14230,AT5G34850,AT1G09640,AT2G32580,AT2G47380,AT2G25450,AT5G03240,AT5G22270,AT3G27210,AT2G46540,AT3G16670,AT1G02920,AT5G57887,AT2G14610,AT4G37910,AT5G64130,AT1G07660,AT2G16280,AT1G08880,AT2G47800,AT1G09840,AT3G57550,AT5G42050,AT2G37770,AT2G18110,AT4G27320,AT1G12780,AT4G16215,AT2G36120,AT5G63800,AT1G22300,AT2G39780,AT3G09820,AT4G00330,AT5G07340,AT5G49890,AT2G01100,AT1G62380,AT5G66040,AT5G53560,AT1G49240,AT5G02790,AT2G02390,AT1G74230,AT4G23670,AT3G03600,AT1G20220,AT1G78670,AT5G18310,AT3G09570,AT2G02950,AT2G39900,AT3G56200,AT1G28440,AT5G62680,AT2G28630,AT4G39280,AT5G37600,AT2G41220,AT1G03220,AT3G28940,AT5G65010,AT5G64260,AT5G56870,AT1G65820,AT4G23710,AT1G57720,AT1G21460,AT1G14980,AT1G25275,AT1G51680,AT1G15270,AT5G35530,AT5G21105,AT1G71880,AT4G33090,AT5G18170,ATCG01130,AT3G07780,AT4G32760,AT1G52780,AT4G24400,AT2G31660,AT2G05520,AT5G44340,AT4G10840,AT5G16880,AT4G08460,AT5G16240,AT5G03630,AT5G65110,AT5G47560,AT1G30880,AT4G26110,AT5G04760,AT4G24510,AT1G30270,AT3G52470,AT1G74790,AT5G44020,AT2G40510,AT4G22690,AT5G54960,AT1G07720,AT2G42680,AT5G54940,AT4G34180,AT5G48485,AT4G18730,AT4G20830,AT1G35720,AT4G34670,AT5G14040,AT2G40080,AT1G22450,AT4G11150,AT2G29530,AT2G03120,AT3G52060,AT5G09590,AT3G03270,AT4G33640,AT2G42790,AT5G16470,AT4G34135,AT1G52310,AT1G11910,AT1G03850,AT1G08800,AT5G35560,AT3G27260,AT3G07100,AT5G35200,AT3G20810,AT2G32190,AT2G25730,AT1G53645,AT4G32180,AT2G27580,AT2G20950,AT1G02120,AT3G05590,AT1G68530,AT4G27000,AT2G33815,AT3G23450,AT4G01100,AT2G17200,AT2G30870,AT2G32240,AT3G08640,AT5G61660,AT1G01170,AT1G27970,AT2G26240,AT1G52740,AT2G15910,AT1G55920,AT1G78820,AT2G05710,AT4G32150,AT1G33590,AT5G47210,AT5G23900,AT5G17770,AT5G11090,AT3G52730,AT2G30980,AT5G65380,AT2G35635,AT1G55910,AT4G36630,AT5G07370,AT2G37540,AT3G17510,AT3G15820,AT3G01770,AT4G10100,AT3G43720,AT1G73650,AT4G29350,AT4G35490,AT2G19540,AT5G10360,AT3G48690,AT5G54500,AT5G67600,AT1G53030,AT2G23450,AT3G60520,AT5G65990,AT3G05690,AT1G34030,AT1G27390,AT3G49490,AT3G57450,AT3G02530,AT3G04120,AT4G33220,AT5G20500,AT1G04040,AT1G18210,AT4G31080,AT4G38510,AT2G32520,AT3G55360,AT5G19990,AT3G24503,AT3G12630,AT2G42490,AT5G11710,AT4G24350,AT1G03040,AT4G07390,AT4G00830,AT5G23860,AT1G76990,AT4G13940,AT4G30190,AT5G08260,AT1G30580,AT5G60640,AT5G61380,AT1G66200,AT5G52040,AT5G19290,AT5G20020,AT3G14990,AT4G34700,AT5G10840,AT1G74560,AT2G32080,AT1G17290,AT1G74100,AT5G58070,AT5G40370,AT1G26630,AT2G47610,AT3G03250,AT5G14950,AT5G18480,AT1G34418,AT4G36250,AT3G48570,AT4G23640,AT4G16143,AT1G71840,AT1G09430,AT2G07360,AT4G27300,AT3G52880,AT1G79230,AT2G23090,AT2G25910,AT4G24690,AT4G25620,AT5G63030,AT5G56600,AT1G27950,AT3G48360,AT4G03560,AT1G27730,AT4G39080,AT4G31180,AT5G21020,AT1G22780,AT5G08570,AT1G31420,AT3G18130,AT2G36130,AT1G67350,AT1G65960,AT4G02890,AT1G27330,AT1G32580,AT1G80930,AT3G15000,AT5G06320,AT4G18930,AT1G48760,AT5G44568,AT5G27760,AT3G12400,AT4G16370,AT3G28920,AT5G48580,AT4G19420,AT1G54740,AT2G31100,AT4G34200,AT3G51610,AT5G48240,AT4G32410,AT2G01140,AT2G36160,AT2G44120,AT2G02510,AT2G46490,AT5G06360,AT1G69870,AT5G58420,AT3G52090,AT5G19230,AT3G06850,AT3G06700,AT5G10180,AT1G01490,AT5G39730,AT4G35750,AT1G05135,AT3G20050,AT2G19480,AT5G13440,AT1G66240,AT5G07580,AT5G11670,AT2G33340,AT2G32690,AT5G23740,AT2G27600,AT1G16700,AT2G18440,ATCG01090,AT1G20330,AT5G40850,AT3G22380,AT2G26250,AT1G10865,AT2G20420,AT2G22080,AT4G10760,AT1G24260,AT5G26000,AT3G13300,AT5G21326,AT5G47830,AT3G01100,AT3G10720,AT4G27820,AT5G24735,AT1G48790,AT5G14410,AT1G33600,AT1G13440,AT4G35220,AT3G51890,AT5G67560,AT5G46315,AT3G26450,AT3G12390,AT3G48990,AT5G67590,AT3G10410,AT2G17360,AT2G37200,AT2G28840,AT1G02140,AT3G52500,AT5G13180,AT5G65720,AT1G14450,AT3G03100,AT1G32790,AT5G08060,AT5G56670,AT5G07470,AT3G57400,AT5G61030,AT4G34490,AT5G45775,AT3G05060,AT1G50640,AT3G60300,AT5G14540,AT3G50930,AT1G23290,AT5G20090,AT4G20260,AT1G02930,AT4G01870,AT3G01290,AT1G70600,AT3G56070,AT3G10090,AT4G14342,AT2G20360,AT2G46390,AT5G20290,AT3G60240,AT4G37660,AT3G30390,AT5G65670,AT1G05010,AT5G65660,AT4G31700,AT2G37190,AT1G79550,AT3G17390,AT3G44010,AT3G18820,AT1G80070,AT2G44065,AT5G05370,AT1G23820,AT1G06950,AT5G46020,AT5G47435,AT4G27500,AT1G60710,AT5G55070,AT1G36050,AT5G19440,AT5G11770,AT3G16370,AT3G14690,AT4G00100,AT1G01430,AT3G49910,AT3G08580,AT4G18100,AT5G15090,AT3G17090,AT5G48810,AT1G31910,AT1G56280,AT3G53740,AT5G27150,AT1G32920,AT5G14920,AT4G32940,AT1G43170,AT5G51040,AT1G09690,AT1G11475,AT5G27700,AT2G17420,AT4G24520,AT4G31500,AT5G04750,AT1G04270,AT2G25210,AT1G67250,AT5G61170,AT2G39010,AT2G36460,AT3G09390,AT5G28050,AT3G45970,AT1G75220,AT1G64230,AT2G27530,AT4G33865,AT4G35230,AT2G32730,AT5G57860,AT2G36290,AT4G14746,AT4G02520,AT4G16920,AT1G17080,AT5G43760,AT2G26910,AT2G01600,AT1G26550,AT3G22120,AT5G57350,AT1G21000,AT5G15320,AT1G04410,AT2G33150,AT5G13780,AT2G05920,ATCG00740,AT4G09800,AT1G54040,AT5G40450,AT1G12440,AT5G10980,AT4G39330,AT1G54270,AT4G13520,AT2G12280,AT1G56045,AT3G62870,AT2G05380,AT2G32060,AT1G15930,AT3G18740,AT5G03850,AT1G74060,AT2G42310,AT3G05530,AT1G01610,AT1G59900,AT4G08850,AT4G04830,AT3G08590,AT3G48720,AT3G62840,AT5G46290,AT1G02280,AT5G22060,AT2G25310,AT1G80040,AT4G26970,AT3G58700,AT3G07110,AT5G33320,AT1G29250,AT3G28050,AT5G57800,AT3G51000,AT1G77130,AT4G21990,AT5G63070,AT1G33140,AT1G02780,AT2G33830,AT1G70780,AT4G30960,AT3G10860,AT5G03290,AT3G59600,AT5G60400,AT2G33470,AT5G05170,AT2G31200,AT4G34050,AT2G31585,AT3G11940,AT4G23100,AT4G13850,AT2G04520,AT1G68300,AT1G65290,AT3G16080,AT1G72370,AT1G74920,AT2G27030,AT5G47890,AT4G30210,AT4G38690,AT5G02870,AT3G11510,AT2G21620,AT5G54430,AT1G33811,AT5G63400,AT2G31410,AT5G59890,AT2G31570,AT2G34480,AT3G06400,AT3G02360,AT5G09510,AT3G16570,AT1G30230,AT2G41840,AT5G14030,AT2G35840,AT5G13710,AT5G41990,AT2G15490,AT1G07930,AT1G67860,AT1G53580,AT2G33220,AT1G14000,AT5G21090,AT3G44310,AT4G05050,AT4G05320,AT5G38650,AT1G29670,AT5G02380,AT1G15120,AT4G01850,AT1G17880,AT1G61740,AT4G39730,AT1G70160,AT5G55620,AT1G73230,AT5G45280,AT5G14780,AT3G62400,AT3G22890,ATMG00020,AT3G46640,AT3G25520,AT3G45030,AT1G75500,AT1G79245,AT1G09310,AT1G22690,AT3G49010,AT2G01490,AT3G48740,AT4G00860,AT5G42080,AT5G06865,AT5G42820,AT1G65720,AT1G19910,AT4G02230,AT4G35830,AT5G27850,AT4G12880,AT3G01470,AT3G45980,AT2G17130,AT3G06310,AT4G00360,AT1G69620,AT5G39590,AT3G01520 KURIHARA_RDR2-1_UP Upregulated in rdr2-1. (Table S2 PubmedID:18805399) AT1G01060,AT1G01580,AT1G14880,AT1G21140,AT1G21250,AT1G33840,AT1G33960,AT1G36370,AT1G36680,AT1G43800,AT1G55910,AT1G60110,AT1G62540,AT1G65490,AT1G65870,AT1G67105,AT1G71890,AT2G14610,AT2G17690,AT2G24540,AT2G29350,AT2G32530,AT2G32990,AT2G38240,AT2G39030,AT2G39330,AT2G40900,AT2G44460,AT2G46830,AT3G09600,AT3G14620,AT3G17609,AT3G23000,AT3G27170,AT3G28270,AT3G28899,AT3G29639,AT3G30720,AT3G42658,AT3G47030,AT3G51240,AT3G57260,AT3G60960,AT4G04293,AT4G08040,AT4G10500,AT4G14400,AT4G14690,AT4G15430,AT4G17090,AT4G21930,AT4G22880,AT5G10040,AT5G10770,AT5G13320,AT5G13930,AT5G14760,AT5G21482,AT5G24150,AT5G24240,AT5G25140,AT5G25250,AT5G35207,AT5G35490,AT5G38005,AT5G42760,AT5G52070,AT5G52640,AT5G54610,AT5G58770 KURIHARA_DDC_UP Upregulated in ddc. (Table S3 PubmedID:18805399) AT1G01060,AT1G01580,AT1G04770,AT1G07180,AT1G10640,AT1G13080,AT1G13470,AT1G13650,AT1G14600,AT1G14880,AT1G16660,AT1G17050,AT1G17870,AT1G20470,AT1G21240,AT1G21250,AT1G23205,AT1G24140,AT1G24145,AT1G24147,AT1G27360,AT1G33260,AT1G33760,AT1G33840,AT1G33960,AT1G35710,AT1G36185,AT1G48100,AT1G49780,AT1G52690,AT1G53090,AT1G53810,AT1G55910,AT1G55960,AT1G56510,AT1G56600,AT1G58520,AT1G60110,AT1G60190,AT1G60590,AT1G62180,AT1G62540,AT1G62560,AT1G64500,AT1G64780,AT1G65490,AT1G65870,AT1G66090,AT1G66230,AT1G66540,AT1G66725,AT1G67105,AT1G68570,AT1G69490,AT1G70000,AT1G70260,AT1G72520,AT1G72910,AT1G72920,AT1G73480,AT1G73870,AT1G74930,AT1G78070,AT1G79270,AT1G80840,AT2G04460,AT2G14560,AT2G14610,AT2G15020,AT2G16000,AT2G16005,AT2G17040,AT2G17690,AT2G18680,AT2G19850,AT2G21320,AT2G22360,AT2G23000,AT2G24540,AT2G27420,AT2G29300,AT2G29350,AT2G31560,AT2G32530,AT2G32540,AT2G33380,AT2G34655,AT2G35960,AT2G36630,AT2G36790,AT2G37100,AT2G37380,AT2G40460,AT2G41190,AT2G44230,AT2G46790,AT2G46830,AT3G01550,AT3G02380,AT3G02830,AT3G04140,AT3G09600,AT3G12320,AT3G12580,AT3G15310,AT3G17609,AT3G17790,AT3G19480,AT3G21150,AT3G21670,AT3G21760,AT3G22550,AT3G22840,AT3G23000,AT3G24460,AT3G27170,AT3G28070,AT3G28270,AT3G28540,AT3G28899,AT3G29639,AT3G30720,AT3G44215,AT3G44630,AT3G46090,AT3G47030,AT3G47420,AT3G47430,AT3G48460,AT3G50060,AT3G51240,AT3G52740,AT3G53830,AT3G55630,AT3G55980,AT3G56080,AT3G56400,AT3G57260,AT3G58810,AT4G04020,AT4G04293,AT4G04610,AT4G08040,AT4G10500,AT4G11190,AT4G11280,AT4G12320,AT4G13800,AT4G13810,AT4G14400,AT4G14690,AT4G15430,AT4G17090,AT4G20000,AT4G20365,AT4G21930,AT4G21990,AT4G23170,AT4G23810,AT4G24570,AT4G26790,AT4G26850,AT4G27030,AT4G29200,AT4G31940,AT4G39210,AT5G02180,AT5G02230,AT5G03350,AT5G07690,AT5G08640,AT5G10380,AT5G10760,AT5G13170,AT5G13320,AT5G13930,AT5G14760,AT5G15500,AT5G15948,AT5G15950,AT5G17220,AT5G17300,AT5G19097,AT5G19240,AT5G19730,AT5G20220,AT5G21100,AT5G23730,AT5G24150,AT5G24210,AT5G24240,AT5G25130,AT5G25140,AT5G25190,AT5G26270,AT5G27925,AT5G32621,AT5G35490,AT5G37300,AT5G38005,AT5G39670,AT5G40390,AT5G40460,AT5G41830,AT5G42760,AT5G43630,AT5G45095,AT5G47220,AT5G48850,AT5G50240,AT5G51190,AT5G52050,AT5G52070,AT5G52300,AT5G52640,AT5G53048,AT5G53280,AT5G54130,AT5G54610,AT5G58120,AT5G58770,AT5G59130,AT5G59220,AT5G59845,AT5G62140,AT5G65890 KURIHARA_CASIRNA-LOCI_RDR2-1_UP Upregulated AGI code genes with casiRNA loci in rdr2-1. (Table S4 PubmedID:18805399) AT1G01060,AT1G36680,AT1G60110,AT1G62540,AT1G67105,AT1G71890,AT2G17690,AT2G39330,AT2G44460,AT3G28899,AT3G29639,AT3G30720,AT3G42658,AT3G47030,AT3G51240,AT3G60960,AT4G04293,AT4G08040,AT4G14400,AT5G24240,AT5G25250,AT5G35207,AT5G35490,AT5G38005,AT5G52070,AT5G54610 KURIHARA_CASIRNA-LOCI_DDC_UP Upregulated AGI code genes with casiRNA loci in ddc. (Table S5 PubmedID:18805399) AT1G01060,AT1G13470,AT1G13650,AT1G16660,AT1G21240,AT1G24147,AT1G35710,AT1G36185,AT1G53810,AT1G55960,AT1G56510,AT1G58520,AT1G60110,AT1G62540,AT1G62560,AT1G66090,AT1G66725,AT1G67105,AT2G04460,AT2G14560,AT2G16000,AT2G17690,AT2G19850,AT2G21320,AT2G33380,AT2G34655,AT3G12580,AT3G15310,AT3G19480,AT3G28070,AT3G28899,AT3G29639,AT3G30720,AT3G44215,AT3G44630,AT3G47030,AT3G51240,AT3G56080,AT4G04293,AT4G08040,AT4G14400,AT4G20000,AT4G20365,AT4G24570,AT4G29200,AT5G19097,AT5G19730,AT5G21100,AT5G24210,AT5G24240,AT5G26270,AT5G27925,AT5G32621,AT5G35490,AT5G38005,AT5G39670,AT5G40390,AT5G45095,AT5G52070,AT5G54610,AT5G59845 KURIHARA_CASIRNA-LOCI_RDR2-1_DDC_UP Upregulated AGI code genes with casiRNA loci in both rdr2-1 and ddc (Table 1 PubmedID:18805399) AT1G01060,AT1G60110,AT1G62540,AT1G67105,AT2G17690,AT3G28899,AT3G29639,AT3G30720,AT3G47030,AT3G51240,AT4G04293,AT4G08040,AT4G14400,AT5G24240,AT5G35490,AT5G38005,AT5G52070,AT5G54610 FABRO_EARLY_INTERACTION-WITH-G.CICHORACEARUM_UP Induced regulated during the early interaction with G. cichoracearum (Table III PubmedID:18218973) AT4G33120,AT2G30140,AT4G22720,AT3G02870,AT3G16520,AT4G29950,AT2G34500,AT1G73480,AT4G28680,AT5G40760,AT5G67030,AT1G18460,AT2G05070,AT1G44446,AT3G08940,AT1G70290,AT1G23880,AT2G34430,AT5G45820,AT2G42590,AT3G17510,AT1G04530,AT3G53420,AT3G52400,AT5G25520,AT3G59060,AT4G11970,AT2G25080,AT3G56940,AT5G44580,AT3G54500,AT1G54390,AT1G11200,AT4G01880,AT4G21850,AT2G30520,AT5G19190 FABRO_EARLY_INTERACTION-WITH-G.CICHORACEARUM_DN Repressed regulated during the early interaction with G. cichoracearum (Table III PubmedID:18218973) AT5G23660,AT2G33830,AT2G25610,AT5G26570,AT1G27630,AT3G10410,AT2G36390,AT2G29630,AT1G18170,AT3G19960,AT1G79440,AT2G28900,AT3G59350,AT4G32551,AT3G24450,AT4G25160,AT5G61380,AT1G56300,AT5G63780,AT3G53460,AT1G12760,AT1G78630,AT3G07650,AT5G20630,AT4G30660,AT1G06460,AT5G05740,AT4G26670,AT3G47860,AT2G40080,AT5G14920,AT2G36320,AT3G63160,AT5G16170 GAETA_GENEVAR_DIPLOID-PROGENITORS-B.RAPA_B.OLERACEA_UP Up-regulated expression (oler_rapa_FDR_average_GeneVar) between the diploid progenitors B. rapa and B. oleracea (Dataset S1 PubmedID:19274085) AT4G12300,AT3G03000,AT3G56990,AT4G37120,AT1G53430,AT3G45440,AT2G47030,AT4G02180,AT1G31820,AT1G17130,AT5G53670,AT3G25900,AT3G10810,AT2G35940,AT3G24540,AT5G63730,AT3G12100,AT1G60130,AT5G58003,AT5G52500,AT3G09510,AT2G42840,AT3G51460,AT4G02050,AT2G40940,AT3G48630,AT1G10290,AT5G27600,AT3G04280,AT4G13040,AT1G34380,AT1G02880,AT4G15430,AT2G13560,AT4G25450,AT1G53470,AT3G51360,AT3G04430,AT1G73540,AT1G10660,AT1G66270,AT2G05170,AT3G26600,AT4G34430,AT3G53600,AT2G39810,AT3G41979,AT5G10450,AT5G30495,AT1G66140,AT3G06380,AT1G15790,AT2G01480,AT3G04550,AT1G06240,AT4G38680,AT2G37800,AT5G23980,AT5G03040,AT4G11980,AT1G27260,AT2G46090,AT5G38460,AT1G15060,AT3G19640,AT5G48020,AT4G13290,AT4G29370,AT3G17340,AT4G35130,AT1G57820,AT5G27560,AT5G07220,AT1G70250,AT5G18620,AT2G23096,AT4G28510,AT1G64890,AT1G49475,AT1G55740,AT4G09630,AT1G27400,AT1G33610,AT1G17290,AT2G32540,AT4G18520,AT5G57490,AT4G29960,AT5G06240,AT2G03230,AT2G41600,AT3G48480,AT2G25430,AT1G01420,AT5G46090,AT5G64730,AT1G77060,AT2G37600,AT5G16760,AT3G28650,AT1G51360,AT1G79640,AT3G60050,AT1G75500,AT4G21660,AT2G37280,AT2G31980,AT5G42030,AT3G01350,AT2G38440,AT5G62080,AT1G79070,AT5G66920,AT3G25950,AT3G25080,AT2G29220,AT1G31290,AT4G38140,AT2G40090,AT3G57710,AT2G02780,AT1G30210,AT5G28970,AT5G11210,AT4G13740,AT5G66820,AT3G20310,AT5G45290,AT1G14520,AT5G66230,AT5G40820,AT1G80410,AT5G57510,AT2G12700,AT2G15900,AT4G35680,AT1G12250,AT5G42090,AT5G64590,AT1G10370,AT3G22720,AT2G05360,AT5G05760,AT5G40080,AT2G31270,AT2G29540,AT4G35280,AT5G40880,AT3G62280,AT1G54790,AT2G01930,AT1G70260,AT4G10510,AT5G10630,AT2G25240,AT3G25020,AT1G14620,AT1G15960,AT4G24390,AT3G07080,AT5G27130,AT5G47310,AT4G05170,AT5G17000,AT3G54750,AT1G15920,AT1G08600,AT1G79190,AT2G46080,AT1G65300,AT4G30320,AT1G17870,AT1G32920,AT3G11010,AT1G49380,AT3G11940,AT1G62510,AT5G53730,AT2G24850,AT1G30380,AT3G14350,AT2G41400,AT4G26300,AT4G24430,AT1G74160,AT5G65687,AT3G21070,AT4G34140,AT5G66280,AT2G31400,AT1G23120,AT1G80610,AT5G66380,AT5G64760,AT4G02680,AT2G05090,AT5G44973,AT3G51480,AT2G36200,AT1G03340,AT1G62560,AT3G14650,AT5G08730,AT4G01450,AT3G28620,AT3G05330,AT5G41290,AT5G16190,AT2G44280,AT5G58510,AT1G30835,AT1G71970,OBSOLETE,AT2G40340,AT2G24930,AT1G08620,AT5G10740,AT4G25470,AT2G26110,AT1G71520,AT5G03380,AT5G15060,AT1G77520,AT1G70750,AT1G16150,AT5G42400,AT5G37850,AT3G29720,AT3G18035,AT2G44850,AT3G46530,AT4G33830,AT1G61680,AT3G06660,AT1G21660,AT1G67070,AT1G54140,AT2G26200,AT3G05370,AT1G64340,AT2G45700,AT4G20470,AT2G45050,AT1G79150,AT3G53090,AT3G16870,AT1G77310,AT5G27020,AT4G09250,AT5G06630,AT5G05590,AT5G24050,AT3G55510,AT1G02870,AT2G06200,AT5G17520,AT4G35300,AT5G55960,AT5G11480,AT4G21500,AT3G54890,AT5G38990,AT1G80590,AT4G29090,AT5G51750,AT4G24490,AT3G29020,AT5G17920,AT1G44090,AT3G50990,AT2G25350,AT5G20930,AT1G55610,AT4G31480,AT3G14220,AT3G07525,AT3G52490,AT2G06570,AT5G48010,AT5G04960,AT1G73850,AT2G01780,AT3G13900,AT3G22110,AT1G52730,AT3G20770,AT4G18580,AT2G45100,AT5G60880,AT4G08770,AT3G63080,AT1G47940,AT5G24510,AT2G16770,AT4G23050,AT1G45976,AT4G22090,AT3G20980,AT5G15940,AT4G04690,AT3G06000,AT5G40770,AT5G38660,AT1G52930,AT2G23600,AT5G35200,AT4G32500,AT1G65500,AT1G14800,AT5G04890,AT3G45800,AT1G50570,AT5G27670,AT1G20220,AT4G04210,AT4G38440,AT4G25380,AT1G75390,AT1G61900,AT4G04955,AT3G22150,AT4G02670,AT3G49380,AT1G34430,AT2G45600,AT4G18380,AT5G66510,AT2G22850,AT3G48710,AT5G43830,AT1G03475,AT2G21280,AT1G51480,AT2G45990,AT3G60740,AT3G57150,AT5G14440,AT3G17850,AT1G16470,AT5G49080,AT4G00400,AT5G65770,AT3G27460,AT3G15790,AT1G63200,AT1G26770,AT1G26730,AT1G26910,AT3G12400,AT5G48870,AT5G41850,AT1G23350,AT4G19390,AT2G17570,AT1G05610,AT4G32410,AT4G29950,AT3G42550,AT3G44630,AT2G47510,AT1G52790,AT4G21220,AT5G02640,AT5G05480,AT2G46190,AT2G05500,AT4G29150,AT4G00234,AT4G33810,AT5G36210,AT1G59970,AT5G44480,AT3G52105,AT2G41310,AT2G25060,AT2G29890,AT4G08910,AT4G31080,AT5G43980,AT5G07800,AT1G74620,AT4G40030,AT1G28250,AT4G13110,AT4G18700,AT2G20670,AT4G22110,AT3G29390,AT1G04040,AT3G59170,AT3G61028,AT5G06170,AT1G57860,AT1G68330,AT2G41160,AT3G55340,AT1G27020,AT2G33470,AT3G22570,AT3G60400,AT4G02550,AT5G59410,AT4G23690,AT1G07745,AT1G02140,AT3G45980,AT3G43270,AT1G27720,AT2G41790,AT1G42470,AT2G46370,AT4G14370,AT4G08400,AT4G19130,AT1G12930,AT5G50710,AT2G34080,AT1G60300,AT1G72570,AT5G65060,AT5G01340,AT2G35620,AT4G20830,AT2G16710,AT4G02340,AT5G47210,AT4G38650,AT1G04800,AT5G41170,AT5G06810,AT1G06420,AT1G32730,AT4G29980,AT3G13410,AT5G41620,AT4G26640,AT5G54140,AT2G15450,AT5G45000,AT2G40600,AT3G17390,AT1G55950,AT1G32460,AT3G46610,AT3G48170,AT2G35450,AT4G04980,AT5G52560,AT4G28050,AT3G21100,AT4G02920,AT1G31150,AT4G19180,AT4G40080,AT1G22100,AT4G39520,AT1G32330,AT4G19950,AT1G07400,AT1G53830,AT1G01860,AT4G30480,AT3G54530,AT5G04090,AT2G37520,AT1G67290,AT4G24480,AT1G54030,AT1G65440,AT3G19240,AT3G57400,AT1G64355,AT3G11250,AT4G37790,AT4G00610,AT3G13230,AT5G20340,AT2G30930,AT4G35200,AT5G24770,AT4G17910,AT4G37260,AT5G23590,AT4G09990,AT1G03170,AT3G13840,AT2G28940,AT3G55920,AT2G34880,AT5G11760,AT1G68930,AT1G50040,AT2G31660,AT4G03470,AT3G43170,AT1G17540,AT3G23750,AT1G32390,AT5G60480,AT5G49980,AT5G39910,AT1G25340,AT5G51590,AT1G63250,AT4G09020,AT5G41160,AT1G06360,AT3G61340,AT2G19120,AT4G33600,AT1G79250,AT4G14050,AT3G28100,AT3G26400,AT5G60150,AT1G17745,AT5G48280,AT2G17530,AT5G49110,AT4G18490,AT5G26210,AT1G78000,AT1G23960,AT5G46660,AT1G03110,AT1G61120,AT1G27385,AT1G12840,AT2G43920,AT5G44316,AT5G35794,AT1G69290,AT5G07920,AT4G39260,AT5G36040,AT5G61080,AT1G54070,AT1G29140,AT3G02690,AT5G14430,AT3G09920,AT2G03390,AT5G43040,AT1G10790,AT3G19330,AT2G39560,AT1G17280,AT1G69490,AT4G16420,AT2G21270,AT1G14490,AT5G38005,AT2G02970,AT1G21060,AT1G01110,AT4G31040,AT2G16130,AT2G38290,AT4G09290,AT5G04530,AT3G21320,AT1G08180,AT5G15300,AT5G40560,AT5G11640,AT3G14090,AT3G27440,AT1G22610,AT4G08470,AT3G58050,AT5G08450,AT5G50020,AT5G45890,AT5G04500,AT1G73660,AT3G18220,AT1G27170,AT2G38720,AT3G28640,AT1G22000,AT5G09450,AT1G62940,AT1G34190,AT2G42770,AT1G65930,AT4G32870,AT5G23180,AT5G11400,AT2G04910,AT1G13220,AT5G44700,AT1G15430,AT1G02660,AT4G39910,AT1G09660,AT5G19120,AT3G54180,AT5G03800,AT5G41300,AT3G16350,AT3G14620,AT5G23080,AT4G31600,AT5G44680,AT2G43230,AT3G12550,AT4G26940,AT4G22620,AT1G55190,AT5G23690,AT1G63610,AT4G01900,AT1G62430,AT1G28320,AT3G06110,AT3G44690,AT3G28390,AT4G03390,AT1G32600,AT2G03670,AT4G02410,AT3G47710,AT5G24760,AT2G04620,AT4G32970,AT2G24120,AT3G23430,AT5G54450,AT3G50590,AT3G03800,AT2G43080,AT3G55190,AT1G17780,AT1G49760,AT5G25990,AT3G56400,AT1G12980,AT1G59535,AT4G12330,AT2G47060,AT3G32040,AT2G44360,AT4G34560,AT2G36020,AT4G29210,AT2G47310,AT5G57090,AT3G04570,AT2G23590,AT3G01180,AT3G07410,AT4G30610,AT5G14590,AT2G41750,AT3G18535,AT5G45570,AT3G02750,AT5G65110,AT1G70520,AT4G35020,AT2G38590,AT1G32100,AT1G23730,AT3G09170,AT1G06850,AT4G31930,AT4G13010,AT5G62580,AT4G16660,AT4G08390,AT4G37340,AT1G03600,AT4G19760,AT1G08470,AT5G45170,AT3G15810,AT4G39660,AT1G20330,AT3G54520,AT5G64370,AT4G33450,AT4G20040,AT5G60870,AT3G51970,AT5G52610,AT1G05770,AT3G57090,AT5G17370,AT5G16220,AT3G52020,AT1G54280,AT1G15500,AT1G74830,AT5G17930,AT3G09200,AT5G59920,AT3G62630,AT3G03350,AT1G23540,AT1G69760,AT5G58200,AT5G50380,AT4G20800,AT1G76670,AT1G50120,AT4G35010,AT1G31580,AT5G13020,AT2G14820,AT2G34210,AT4G05330,AT2G43180,AT5G50490,AT2G18940,AT2G16850,AT4G12490,AT1G29240,AT1G03900,AT4G35335,AT4G18500,AT3G60800,AT4G25900,AT1G49650,AT3G28700,AT5G62050,AT5G66030,AT3G43240,AT1G62950,AT5G55080,AT2G27690,AT1G68780,AT5G64310,AT1G74390,AT1G56330,AT4G25540,AT4G08570,AT1G36310,AT1G42460,AT2G43820,AT1G02540,AT4G04580,AT5G15800,AT1G60780,AT3G18165,AT5G62430,AT1G07180,AT1G74730,AT5G45710,AT4G31170,AT3G17230,AT1G55250,AT2G36270,AT5G64690,AT5G67210,AT5G53140,AT4G29100,AT4G29700,AT1G76210,AT1G34010,AT5G20290,AT4G34060,AT1G33811,AT1G63030,AT4G01310,AT3G17090,AT1G17750,AT4G12570,AT4G14340,AT5G12220,AT5G55230,AT5G24060,AT3G55610,AT1G22140,AT3G03110,AT3G20350,AT1G49050,AT4G02520,AT5G41890,AT5G56290,AT1G68480,AT1G66920,AT2G19510,AT2G27770,AT1G13800,AT3G17480,AT2G01800,AT1G79610,AT3G47920,AT1G02110,AT3G04090,AT3G48430,AT1G63880,AT3G21200,AT1G73655,AT1G04950,AT1G14850,AT5G05040,AT1G15530,AT2G23470,AT3G16000,AT4G33560,AT4G01330,AT3G52350,AT2G25700,AT4G00930,AT3G29035,AT3G42450,AT4G08150,AT1G29740,AT1G20680,AT5G66470,AT5G04710,AT1G54540,AT2G03370,AT2G37860,AT3G29280,AT4G07340,AT5G06930,AT2G31600,AT5G52940,AT5G61380,AT5G67090,AT2G33860,AT1G56000,AT1G60160,AT4G38150,AT1G73400,AT3G05930,AT1G55200,AT3G63190,AT1G76140,AT5G03170,AT2G33120,AT2G10550,AT5G57880,AT5G64280,AT1G65380,AT4G20330,AT1G14345,AT3G56530,AT3G44110,AT1G33530,AT1G11710,AT5G24360,AT3G21620,AT3G19810,AT2G18930,AT1G71410,AT4G37770,AT1G70970,AT4G02770,AT1G54490,AT3G45960,AT1G12890,AT1G77700,AT3G10020,AT1G26310,AT3G62880,AT1G29780,AT1G04690,AT5G11220,AT4G10550,AT5G10340,AT3G04480,AT3G12810,AT5G56590,AT3G19560,AT3G03080,AT5G23490,AT1G04640,AT5G55630,AT1G53730,AT5G58400,AT1G13580,AT1G64940,AT4G17950,AT4G30370,AT2G23800,AT4G08320,AT3G44880,AT1G30250,AT5G16370,AT5G06500,AT1G71750,AT5G48920,AT3G10230,AT5G01750,AT5G48930,AT5G37860,AT2G17380,AT1G57670,AT5G48290,AT2G05830,AT4G08410,AT3G59340,AT5G11580,AT1G66510,AT3G15730,AT5G10890,AT5G24350,AT5G02750,AT1G05385,AT2G13360,AT4G04490,AT5G02790,AT3G15710,AT5G41180,AT1G64300,AT5G19690,AT1G52220,AT4G33740,AT4G10410,AT5G58750,AT1G06470,AT1G22110,AT2G26120,AT3G20830,AT2G42980,AT4G17500,AT4G33260,AT5G15970,AT4G16390,AT3G26270,AT4G04780,AT3G33520,AT2G47670,AT5G45130,AT2G20850,AT4G35040,AT1G01160,AT2G35380,AT5G64813,AT5G57840,AT5G48830,AT1G22490,AT2G35630,AT5G11110,AT1G77490,AT5G37170,AT1G16170,AT5G63410,AT3G05480,AT2G01150,AT5G17420,AT3G17280,AT2G25230,AT1G14360,AT1G07210,AT3G20920,AT2G07680,AT1G69820,AT1G80390,AT3G46700,AT2G04920,AT5G36070,AT1G63140,AT2G30000,AT1G35560,AT2G44380,AT1G18650,AT1G17665,AT4G08330,AT5G62190,AT4G27490,AT5G66360,AT3G23150,AT5G51340,AT1G04190,AT3G07700,AT3G16720,AT2G37410,AT5G43560,AT5G03750,AT1G09510,AT4G22100,AT5G05630,AT4G33760,AT2G01220,AT5G09660,AT3G47810,AT1G63500,AT1G32220,AT2G23770,AT3G50720,AT3G02460,AT2G19210,AT2G39990,AT5G65320,AT2G45760,AT1G72840,AT1G29520,AT1G03000,AT5G13650,AT5G56040,AT1G73870,AT4G15120,AT4G29820,AT3G42590,AT1G37080,AT1G51110,AT5G47480,AT3G15510,AT1G72500,AT5G08260,AT5G52660,AT5G67570,AT5G06450,AT1G13990,AT3G23060,AT2G11520,AT3G47730,AT3G61630,AT4G16600,AT3G53280,AT4G05640,AT5G05450,AT1G68470,AT5G50650,AT1G78820,AT3G04270,AT1G64650,AT1G32470,AT1G80865,AT5G05190,AT5G67590,AT5G59380,AT5G41840,AT4G38700,AT1G61740,AT5G52600,AT3G18210,AT3G45680,AT4G04070,AT5G50240,AT3G29100,AT4G22900,AT4G20130,AT2G25760,AT3G03450,AT5G22380,AT1G07050,AT2G46850,AT1G65030,AT4G37650,AT2G26680,AT1G73510,AT1G17910,AT1G15220,AT5G58030,AT1G53570,AT3G61040,AT5G56380,AT3G28980,AT4G18905,AT5G40480,AT4G28025,AT1G08410,AT3G53390,AT1G30300,AT5G47430,AT2G29340,AT1G04430,AT2G29820,AT4G09130,AT1G11000,AT2G48110,AT5G51010,AT2G24840,AT5G40410,AT3G27473,AT5G56690,AT1G76990,AT3G21670,AT2G29310,AT3G29610,AT1G62200,AT5G15290,AT2G38080,AT3G25855,AT5G54850,AT3G58600,AT4G11420,AT3G16340,AT1G67090,AT1G18680,AT1G18100,AT3G57850,AT2G22170,AT5G37720,AT5G05310,AT5G08310,AT1G53700,AT2G44270,AT5G63300,AT4G18010,AT1G30840,AT5G50540,AT3G15355,AT1G75620,AT3G24600,AT1G07080,AT1G43995,AT3G22680,AT5G58450,AT1G21510,AT1G47780,AT5G46610,AT1G35610,AT3G07990,AT5G66970,AT3G09440,AT4G03230,AT1G29500,AT4G13495,AT2G38570,AT2G23890,AT5G46470,AT1G24320,AT1G74020,AT3G01450,AT5G49020,AT3G06620,AT3G18570,AT5G57440,AT5G06850,AT2G37780,AT2G04270,AT5G59960,AT2G13430,AT5G51430,AT1G16510,AT5G67220,AT4G34050,AT3G62040,AT5G14250,AT2G20760,AT4G10140,AT1G10600,AT2G30615,AT3G22300,AT5G58190,AT1G68980,AT1G77570,AT2G45140,AT2G17860,AT1G74510,AT5G61730,AT1G09620,AT2G45950,AT1G11320,AT1G24560,AT5G38560,AT1G27760,AT4G22510,AT1G63490,AT2G14850,AT3G15970,AT5G56730,AT2G28740,AT5G49210,AT4G04510,AT4G11350,AT4G18230,AT5G54760,AT5G59810,AT2G04040,AT4G37800,AT1G75270,AT5G36100,AT4G21810,AT5G41520,AT1G67910,AT4G34040,AT3G20100,AT3G26280,AT1G69530,AT4G38550,AT1G13880,AT2G37440,AT4G23540,AT2G21650,AT5G51310,AT4G21670,AT3G03830,AT3G43670,AT3G61920,AT1G53250,AT5G61640,AT2G28210,AT1G53550,AT3G51050,AT5G66260,AT3G48960,AT1G54000,AT2G37960,AT2G24990,AT2G46270,AT4G21820,AT1G19240,AT3G18780,AT5G09240,AT4G15300,AT5G63440,AT1G57850,AT1G22030,AT4G09680,AT2G40220,AT5G08020,AT2G39930,AT2G47000,AT4G14880,AT5G01250,AT5G10190,AT5G61140,AT1G65270,AT3G09050,AT4G13970,AT4G22300,AT1G72900,AT3G26860,AT1G23280,AT1G13630,AT3G22520,AT1G14730,AT2G22070,AT2G26330,AT1G78880,AT4G19510,AT5G15450,AT2G20530,AT2G33710,AT1G04550,AT2G35600,AT2G13730,AT2G25890,AT2G02500,AT4G16670,AT5G56200,AT1G61640,AT5G54030,AT5G09390,AT1G52150,AT1G15040,AT4G34090,AT3G03900,AT2G19850,AT4G19050,AT2G34120,AT4G24710,AT1G55510,AT2G33300,AT2G41430,AT4G29590,AT5G63520,AT1G52700,AT1G49390,AT5G66410,AT3G18560,AT5G67510,AT5G56260,AT3G52200,AT3G50620,AT3G22800,AT3G56600,AT5G56890,AT1G05120,AT1G48120,AT3G59550,AT4G17050,AT5G22950,AT3G12990,AT4G24690,AT5G55150,AT5G35690,AT5G47350,AT1G03980,AT4G14060,AT1G54590,AT5G56460,AT5G65630,AT1G49110,AT3G51560,AT1G28330,AT2G19310,AT5G01370,AT4G18070,AT1G48140,AT5G06490,AT1G03750,AT2G41120,AT4G35140,AT1G76430,AT5G08030,AT5G52550,AT3G16730,AT1G75990,AT1G60180,AT1G03830,AT4G25500,AT1G48900,AT3G28230,AT1G47655,AT3G54540,AT1G29950,AT5G46280,AT1G23190,AT2G30940,AT5G08750,AT1G02270,AT3G21940,AT3G18030,AT1G06070,AT2G45850,AT4G10540,AT1G55650,AT2G19860,AT5G20720,AT5G13655,AT3G20140,AT1G31910,AT1G55350,AT5G57310,AT1G27990,AT1G71180,AT1G13140,AT5G40040,AT1G73350,AT5G01330,AT2G27180,AT5G11590,AT4G09840,AT1G28160,AT2G38140,AT1G19670,AT3G22060,AT1G20100,AT5G23650,AT1G64860,AT1G59900,AT4G11710,AT3G53370,AT3G50050,AT1G19010,AT5G35100,AT1G11250,AT5G09630,AT2G40580,AT1G74090,AT1G48150,AT5G57130,AT4G16780,AT1G11810,AT5G24530,AT4G18930,AT1G50750,AT1G55180,AT5G11700,AT5G50720,AT3G14440,AT5G23220,AT5G54480,AT4G39950,AT2G24060,AT1G29940,AT3G18010,AT3G11440,AT4G19100,AT5G04810,AT5G55280,AT1G51170,AT1G72330,AT5G57080,AT5G01060,AT1G28450,AT2G17520,AT2G15290,AT3G63210,AT1G61460,AT5G64190,AT4G33180,AT1G68570,AT4G11260,AT1G18030,AT1G48230,AT5G12270,AT1G51530,AT2G15300,AT5G11790,AT4G21050,AT3G30480,AT5G47460,AT5G01380,AT2G31350,AT3G19184,AT3G46050,AT4G25550,AT4G00100,AT5G13590,AT5G44410,AT4G37360,AT1G13620,AT4G20840,AT1G10000,AT1G64195,AT1G06690,AT5G03555,AT3G55210,AT1G19840,AT5G48140,AT2G02540,AT3G24730,AT2G18590,AT3G51440,AT5G01190,AT1G42250,AT3G02190,AT3G20340,AT2G42060,AT2G33510,AT5G53510,AT1G76080,AT4G11920,AT1G60730,AT3G49900,AT1G72510,AT5G02180,AT1G48310,AT3G45840,AT1G15940,AT3G62530,AT1G01770,AT1G53950,AT5G19040,AT1G61780,AT5G36690,AT1G68610,AT5G56540,AT1G15130,AT5G49380,AT1G29110,AT1G55680,AT4G39810,AT1G72540,AT1G15380,AT2G45520,AT5G18260,AT2G28050,AT1G20065,AT3G07330,AT5G57500,AT5G07170,AT1G09680,AT5G04140,AT5G13920,AT1G30440,AT5G24710,AT1G27420,AT5G55240,AT2G07290,AT2G30270,AT5G16840,AT5G03360,AT1G03080,AT4G20760,AT3G53950,AT3G53540,AT5G61740,AT5G46580,AT1G02410,AT2G02170,AT3G49240,AT1G80480,AT2G33370,AT3G21080,AT1G04330,AT5G52700,AT5G43620,AT1G73320,AT1G51950,AT1G53020,AT1G51730,AT5G45640,AT3G58220,AT4G10890,AT4G00700,AT1G51870,AT3G42670,AT3G25930,AT3G19850,AT3G04460,AT3G16390,AT3G47200,AT4G11460,AT1G31490,AT5G53160,AT1G22210,AT5G14600,AT2G24140,AT5G26780,AT5G28770,AT2G32890,AT3G14640,AT1G33410,AT5G17290,AT4G02300,AT1G62720,AT3G18140,AT3G49600,AT2G39140,AT1G08260,AT3G18260,AT1G69170,AT5G38450,AT3G15530,AT5G48640,AT5G04760,AT1G15600,AT1G26110,AT1G05150,AT5G65490,AT5G66910,AT2G32480,AT5G50910,AT4G38730,AT1G01530,AT3G48850,AT1G60870,AT2G26920,AT1G13440,AT5G12170,AT2G02490,AT3G62680,AT5G07520,AT5G43180,AT3G44713,AT1G57765,AT5G06700,AT1G79510,AT3G56630,AT2G16700,AT5G54870,AT4G16850,AT2G28450,AT5G56510,AT3G01500,AT5G59870,AT1G64490,AT4G23210,AT4G07530,AT4G36400,AT2G21840,AT4G33850,AT1G76160,AT5G11560,AT3G63520,AT4G07400,AT5G49920,AT5G02900,AT3G30280,AT1G66700,AT1G65770,AT4G20170,AT4G10970,AT1G71820,AT2G16900,AT2G22570,AT1G48970,AT4G27980,AT5G42820,AT1G72110,AT1G63010,AT3G27260,AT1G19570,AT2G41550,AT1G03590,AT3G48020,AT1G29020,AT5G58680,AT3G10860,AT2G29140,AT4G21510,AT4G23160,AT3G43750,AT3G57620,AT3G07520,AT4G35690,AT3G17210,AT1G73390,AT5G35740,AT2G23760,AT1G22870,AT5G22940,AT1G79110,AT5G17400,AT4G27050,AT2G39180,AT4G23080,AT1G13610,AT1G27880,AT5G14970,AT4G26610,AT1G67700,AT4G09390,AT5G07560,AT5G14490,AT3G45780,AT5G11460,AT4G36120,AT2G42090,AT5G13870,AT1G14140,AT2G25850,AT1G14570,AT1G27280,AT1G77590,AT3G62920,AT5G43740,AT5G50110,AT1G17950,AT2G35020,AT2G31150,AT4G21080,AT1G73120,AT4G10940,AT3G13350,AT5G65230,AT2G19520,AT1G73940,AT2G34190,AT1G52910,AT2G21910,AT2G06140,AT4G34960,AT5G05830,AT5G24000,AT3G57785,AT3G53030,AT5G64050,AT3G03640,AT5G24040,AT2G40250,AT1G58080,AT4G15393,AT5G44190,AT4G27130,AT3G20660,AT5G45700,AT2G39510,AT2G30110,AT2G07090,AT1G06440,AT2G43930,AT3G13630,AT1G60980,AT5G39960,AT2G27580,AT5G63720,AT5G03810,AT4G40000,AT4G10250,AT2G19640,AT1G56250,AT2G18540,AT5G07990,AT2G41730,AT3G04920,AT5G36240,AT5G08060,AT1G09710,AT5G16560,AT5G50760,AT2G05760,AT2G20360,AT5G23320,AT2G12100,AT2G25170,AT2G28090,AT4G35670,AT4G15940,AT5G49740,AT3G08840,AT1G52070,AT4G01910,AT1G07680,AT2G46040,AT2G29150,AT5G05120,AT5G18140,AT5G50080,AT2G29070,AT3G47000,AT1G14970,AT3G59080,AT1G48130,AT2G23390,AT3G18640,AT3G24800,AT5G66020,AT2G27860,AT2G02880,AT1G53520,AT1G47310,AT1G21200,AT1G26520,AT3G55580,AT2G19320,AT1G05170,AT2G30820,AT1G22470,AT3G57140,AT5G42070,AT1G05970,AT2G39210,AT4G30630,AT2G44520,AT1G17920,AT3G51030,AT5G28850,AT4G30825,AT5G50340,AT1G76710,AT1G49360,AT2G30050,AT4G28370,AT5G16360,AT4G11030,AT1G19830,AT5G54080,AT5G16290,AT1G15000,AT5G58080,AT2G45790,AT2G27080,AT5G41910,AT1G18470,AT4G28980,AT1G12560,AT1G08135,AT1G20200,AT1G18160,AT2G42750,AT5G23130,AT3G13780,AT5G36110,AT1G55360,AT3G62130,AT1G80245,AT3G25490,AT5G20280,AT4G32690,AT1G66060,AT1G50600,AT1G51780,AT3G54870,AT4G02710,AT3G01570,AT4G25800,AT2G42170,AT5G53750,AT3G47840,AT3G27770,AT4G12100,AT2G18660,AT5G55000,AT2G44950,AT5G06310,AT5G04000,AT4G36620,AT2G35540,AT2G29130,AT2G02630,AT3G52920,AT1G77720,AT5G49620,AT5G63670,AT2G25010,AT1G52760,AT3G23570,AT3G14830,AT5G16770,AT1G13380,AT1G61095,AT1G12130,AT4G24520,AT2G26430,AT5G01410,AT1G56500,AT1G66970,AT5G47960,AT5G63960,AT1G65240,AT4G29170,AT5G51490,AT4G23910,AT5G63310,AT1G64260,AT1G09630,AT5G09850,AT4G25970,AT1G06890,AT1G72240,AT1G10220,AT2G11000,AT4G00585,AT2G36300,AT1G57943,AT2G31850,AT5G45900,AT1G63050,AT3G17130,AT3G56140,AT1G29230,AT1G67210,AT3G12720,AT3G54380,AT4G39860,AT1G15400,AT2G32630,AT5G55400,AT1G70440,AT3G27410,AT1G61310,AT1G48990,AT5G52300,AT1G65250,AT4G09510,AT2G36060,AT4G32090,AT5G49160,AT1G52230,AT1G43090,AT1G56430,AT5G38890,AT5G15900,AT4G34460,AT5G19600,AT1G66470,AT5G64110,AT1G22250,AT3G14205,AT3G46960,AT1G72630,AT1G64700,AT1G32130,AT3G19000,AT3G12340,AT1G10690,AT3G22630,AT4G30420,AT2G15660,AT5G42490,AT1G71780,AT1G31220,AT5G40830,AT2G27810,AT3G29770,AT3G56650,AT2G47430,AT3G05240,AT3G09810,AT1G64970,AT5G59530,AT1G74970,AT4G24740,AT4G33350,AT5G35600,AT5G11710,AT3G47300,AT2G01900,AT2G41300,AT4G33120,AT5G58110,AT2G43870,AT2G46130,AT3G61060,AT4G37940,AT4G31450,AT3G11180,AT3G62690,AT5G57790,AT4G30250,AT4G14390,AT5G64290,AT5G42750,AT5G14610,AT5G01810,AT4G30300,AT5G61540,AT1G53660,AT2G21210,AT3G49990,AT3G07760,AT3G45560,AT4G28540,AT3G46350,AT2G43890,AT1G02475,AT1G08020,AT1G22640,AT3G04650,AT5G59300,AT1G19340,AT2G46820,AT2G20815,AT2G39280,AT2G31390,AT3G20530,AT3G22750,AT1G49850,AT5G03890,AT4G01730,AT3G14600,AT1G32710,AT1G77930,AT5G59080,AT1G03850,AT2G46160,AT2G40160,AT5G26580,AT3G10090,AT3G45330,AT3G46510,AT3G10550,AT3G03580,AT3G16940,AT1G08190,AT5G06940,AT2G32990,AT3G45580,AT3G17470,AT5G60170,AT5G56970,AT2G21510,AT3G52340,AT4G37920,AT1G43940,AT1G76460,AT1G26210,AT4G20690,AT5G05660,AT1G75920,AT3G25480,AT2G34720,AT3G46130,AT5G53540,AT3G16840,AT2G14100,AT3G56340,AT5G04780,AT3G10830,AT1G07480,AT3G07970,AT5G64910,AT1G34000,AT1G70500,AT1G77670,AT2G34810,AT2G26840,AT1G05805,AT3G14450,AT5G20330,AT2G45840,AT3G29400,AT4G17830,AT1G01730,AT5G67380,AT4G02930,AT3G09830,AT1G77660,AT1G69920,AT4G18375,AT5G42905,AT1G70480,AT1G30720,AT3G18550,AT3G54270,AT2G36460,AT1G52390,AT5G47670,AT1G69670,AT3G02480,AT3G44310,AT1G50280,AT3G22950,AT1G02370,AT3G60680,AT5G57600,AT1G76690,AT2G33180,AT2G22125,AT4G23760,AT4G03130,AT5G15950 GAETA_GENEVAR_DIPLOID-PROGENITORS-B.RAPA_B.OLERACEA_DN Down-regulated expression (oler_rapa_FDR_average_GeneVar) between the diploid progenitors B. rapa and B. oleracea (Dataset S1 PubmedID:19274085) AT3G26940,AT1G26930,AT1G57700,AT4G33610,AT5G39730,AT3G23880,AT3G25540,AT1G30760,AT1G05790,AT5G41940,AT4G36050,AT5G17390,AT1G74320,AT2G37340,AT5G09780,AT1G46408,AT3G13200,AT3G59660,AT1G13460,AT5G03150,AT2G47690,AT5G15530,AT3G62470,AT1G63970,AT2G11910,AT3G49640,AT5G20040,AT2G38390,AT1G09415,AT1G15080,AT4G39500,AT3G11700,AT2G28930,AT5G22650,AT2G11462,AT3G10580,AT1G47710,AT5G52200,AT3G03890,AT3G28990,AT4G15280,AT1G11200,AT1G65880,AT5G05810,AT2G28360,AT4G16430,AT1G13780,AT1G10180,AT5G53070,AT1G78240,AT3G20950,AT5G52210,AT1G07130,AT5G46640,AT2G30710,AT1G04980,AT1G62710,AT3G50010,AT1G09245,AT5G54100,AT4G35420,AT4G17360,AT4G39520,AT3G05190,AT3G58690,AT5G19130,AT5G62890,AT4G37820,AT3G10800,AT3G23910,AT2G35270,AT1G27640,AT1G32900,AT1G61300,AT4G10920,AT5G14920,AT5G41400,AT4G32920,AT1G33520,AT4G08530,AT5G10430,AT2G19950,AT1G19770,AT1G05890,AT1G75600,AT2G38630,AT3G45638,AT4G33020,AT2G23060,AT2G02690,AT1G57580,AT1G79370,AT5G48650,AT5G56210,AT4G20050,AT1G17530,AT5G49830,AT1G30845,AT2G09840,AT3G47620,AT3G13235,AT4G10600,AT3G16210,AT5G13300,AT5G24200,AT3G22640,AT1G65090,AT5G05900,AT2G37540,AT5G48230,AT5G64570,AT3G46320,AT5G12400,AT2G17680,AT2G02610,AT1G54955,AT3G44750,AT5G19150,AT1G36960,AT4G10500,AT5G19820,AT5G62165,AT2G31430,AT3G14930,AT1G64740,AT5G11370,AT5G66840,AT3G15360,AT1G74910,AT4G13140,AT5G53800,AT1G63950,AT3G46800,AT2G34290,AT1G35290,AT5G02060,AT4G38500,AT3G43290,AT5G51290,AT5G51850,AT5G55680,AT3G47675,AT3G61530,AT4G28040,AT3G49220,AT1G20380,AT1G22015,AT5G48000,AT3G20940,AT2G30150,AT3G43680,AT2G27820,AT1G28080,AT5G61590,AT5G24230,AT1G59980,AT4G00380,AT1G50920,AT2G36790,AT2G34110,AT1G06840,AT2G26370,AT2G42140,AT2G45460,AT5G42410,AT4G09970,AT2G22070,AT2G26940,AT3G07540,AT3G62940,AT1G03330,AT3G15050,AT3G53800,AT3G15090,AT2G29740,AT2G37250,AT5G08620,AT5G55580,AT3G11850,AT5G48800,AT4G23290,AT5G59750,AT1G64040,AT2G34400,AT2G22640,AT2G04830,AT5G60850,AT3G19710,AT4G37690,AT5G13550,AT1G68110,AT1G04380,AT1G53210,AT5G54050,AT4G31590,AT3G02650,AT1G48880,AT4G10610,AT5G51690,AT2G33690,AT2G43800,AT1G80300,AT3G50110,AT4G28420,AT1G79150,AT1G72220,AT3G15260,AT5G13390,AT5G38040,AT4G21300,AT5G08460,AT5G49930,AT5G63950,AT1G17430,AT3G12410,AT1G61200,AT3G23605,AT2G47440,AT5G63920,AT5G13600,AT1G71890,AT3G08650,AT2G19810,AT5G02720,AT2G22750,AT2G43240,AT3G03140,AT5G02610,AT2G41330,AT4G13380,AT4G13770,AT3G22560,AT3G11950,AT2G38860,AT5G14720,AT5G41090,AT4G19410,AT3G04720,AT4G13710,AT4G07460,AT4G37760,AT2G39580,AT3G21490,AT4G23820,AT1G22810,AT2G23080,AT1G19970,AT3G45050,AT5G44980,AT3G23040,AT3G27810,AT1G73710,AT4G02730,AT2G01090,AT4G01070,AT5G58900,AT5G51330,AT1G30690,AT4G20270,AT3G58970,AT4G25220,AT5G37250,AT4G36120,AT3G18660,AT1G66620,AT5G08415,AT3G12230,AT2G01660,AT4G32840,AT2G45470,AT3G48310,AT3G12900,AT1G14550,AT4G11130,AT1G66020,AT2G37000,AT4G11410,AT2G22730,AT1G17390,AT4G30200,AT4G28320,AT5G55120,AT1G47820,AT5G10860,AT3G57780,AT2G39010,AT3G62830,AT3G01550,AT1G28410,AT4G32800,AT1G47750,AT5G56900,AT5G16480,AT3G08940,AT1G13170,AT3G18773,AT1G68170,AT3G57580,AT2G24320,AT1G25682,AT4G05160,AT3G18840,AT5G57530,AT1G06870,AT4G23710,AT2G40750,AT4G04880,AT3G18200,AT4G24610,AT2G14720,AT5G14530,AT4G14530,AT5G54970,AT1G06270,AT3G57570,AT2G34590,AT2G37310,AT1G70320,AT5G22220,AT1G50060,AT5G40980,AT5G17110,AT3G25420,AT3G26120,AT3G24503,AT2G35830,AT5G01440,AT1G55700,AT5G66890,AT1G68740,AT5G47580,AT2G40920,AT1G74150,AT5G54440,AT2G07110,AT1G26650,AT2G33110,AT5G52760,AT1G20710,AT1G62290,AT5G46980,AT5G43940,AT1G63220,AT4G30010,AT2G34140,AT5G65590,AT1G10270,AT5G57030,AT1G71070,AT1G53840,AT1G36990,AT1G53380,AT1G48790,AT3G19650,AT3G62580,AT2G01730,AT1G72360,AT1G53170,AT1G61890,AT3G26140,AT2G15970,AT2G38950,AT3G20740,AT5G61610,AT2G40990,AT3G52170,AT5G56700,AT2G39870,AT2G21680,AT4G05620,AT2G30310,AT5G36940,AT1G78560,AT3G23670,AT5G37020,AT5G36960,AT3G59950,AT4G31100,AT3G16240,AT4G21940,AT2G32470,AT2G02150,AT3G56730,AT5G09640,AT1G04000,AT5G60980,AT5G55390,AT5G62730,AT1G49820,AT2G23930,AT2G43360,AT3G18190,AT2G07340,AT3G46030,AT3G53780,AT3G46420,AT1G72150,AT5G10070,AT1G32230,AT5G25300,AT3G11730,AT1G73990,AT5G61310,AT5G55520,AT4G07410,AT5G01660,AT2G31360,AT3G16140,AT1G79460,AT5G64210,AT3G19100,AT4G10070,AT1G51610,AT3G21870,AT1G61570,AT5G38470,AT1G01230,AT4G23950,AT5G01840,AT5G65010,AT5G63380,AT3G11590,AT5G20350,AT1G10540,AT4G24420,AT3G03550,AT5G13990,AT3G19740,AT3G51180,AT2G14450,AT1G11260,AT2G41740,AT2G40000,AT2G04000,AT2G39260,AT1G73530,AT3G28890,AT3G23090,AT1G07290,AT3G04940,AT1G23870,AT5G42690,AT4G32560,AT5G16580,AT5G08570,AT1G09510,AT3G17200,AT1G53020,AT3G48600,AT4G13890,AT1G80120,AT4G00030,AT1G45080,AT3G13950,AT3G10610,AT5G59440,AT5G56270,AT1G32210,AT3G58670,AT5G38910,AT3G61540,AT1G08440,AT3G05860,AT4G19360,AT1G74640,AT5G50260,AT4G04885,AT2G39320,AT5G12190,AT3G15910,AT3G45150,AT3G07670,AT5G43330,AT1G71860,AT5G55340,AT1G52460,AT1G21100,AT1G11970,AT3G04840,AT4G21540,AT2G45780,AT4G26200,AT1G53430,AT4G35110,AT1G76190,AT3G14420,AT3G21090,AT5G03420,AT3G45430,AT5G60070,AT1G12950,AT1G74330,AT4G12545,AT2G39795,AT5G38800,AT5G17770,AT4G28730,AT1G19450,AT4G09730,AT4G21060,AT2G27390,AT1G75020,AT1G28540,AT1G17270,AT1G19790,AT5G46190,AT3G66654,AT1G21630,AT5G36270,AT2G14210,AT5G49770,AT3G09580,AT5G64630,AT2G24940,AT3G12930,AT2G04090,AT1G54420,AT1G01960,AT4G14170,AT5G59800,AT4G08810,AT3G62590,AT1G35240,AT3G17550,AT5G48110,AT1G65120,AT3G06830,AT2G22660,AT1G47330,AT4G00220,AT3G58420,AT3G49440,AT1G16750,AT5G50970,AT4G40050,AT5G10180,AT5G16350,AT4G24380,AT4G30310,AT3G09110,AT3G45590,AT3G13650,AT5G21090,AT5G41530,AT5G17350,AT1G75800,AT5G06530,AT5G53320,AT3G56750,AT5G37480,AT4G39120,AT4G37400,AT3G05690,AT3G13224,AT3G59910,AT3G23480,AT2G31450,AT4G16143,AT5G64690,AT5G63030,AT2G34500,AT3G10640,AT4G36510,AT2G38050,AT3G21175,AT4G32600,AT5G24270,AT2G25080,AT2G17690,AT5G44500,AT5G51580,AT5G06600,AT3G16280,AT1G12280,AT4G37000,AT5G10240,AT4G07310,AT1G04400,AT5G64970,AT5G45520,AT5G15410,AT3G17540,AT5G37400,AT5G55790,AT4G32230,AT3G55020,AT1G05460,AT3G05320,AT2G18170,AT1G76880,AT1G24540,AT1G65060,AT3G05350,AT3G29200,AT1G30570,AT3G11964,AT3G51580,AT1G06580,AT3G20480,AT5G51640,AT2G21750,AT5G03100,AT3G27920,AT3G52090,AT4G37510,AT3G50390,AT5G64740,AT5G15330,AT5G11740,AT1G28570,AT1G20910,AT1G33230,AT1G68010,AT1G55430,AT2G01530,AT1G21460,AT5G17180,AT3G14190,AT2G34170,AT2G31670,AT5G62380,AT1G52650,AT1G55480,AT3G47580,AT3G60450,AT5G57570,AT2G25840,AT1G55860,AT3G18870,AT2G31140,AT5G64200,AT5G03210,AT5G49570,AT5G49950,AT5G45330,AT5G54360,AT1G18780,AT2G35100,AT4G24190,AT1G33940,AT3G04750,AT4G02330,AT4G08850,AT5G53890,AT3G14460,AT3G48790,AT5G56770,AT4G25120,AT2G40280,AT2G35370,AT3G10910,AT5G55560,AT2G47880,AT2G43720,AT4G25780,AT3G49330,AT5G46620,AT4G27540,AT3G05330,AT5G58330,AT1G17100,AT2G33080,AT1G07340,AT5G37530,AT5G58575,AT4G11230,AT1G77630,AT3G15720,AT5G54200,AT4G15850,AT4G14580,AT5G21910,AT3G22780,AT2G40480,AT3G57110,AT3G26900,AT5G49650,AT2G40740,AT2G30100,AT1G51940,AT1G80940,AT5G46150,AT1G26700,AT1G18560,AT1G08720,AT2G21090,AT4G32330,AT2G34390,AT4G37560,AT5G50860,AT1G77280,AT2G16620,AT5G15380,AT1G80970,AT4G30930,AT2G01440,AT2G32750,AT2G13840,AT4G11330,AT2G21740,AT1G73600,AT4G25200,AT1G80870,AT4G26550,AT2G45830,AT1G79720,AT1G06170,AT1G01880,AT3G17170,AT5G38810,AT1G51640,AT1G54450,AT5G49540,AT3G27980,AT4G18400,AT1G08980,AT4G12340,AT1G80110,AT2G38870,AT4G11070,AT3G62870,AT5G56010,AT4G03430,AT5G64450,AT3G56770,AT3G53700,AT4G27520,AT3G59590,AT4G25434,AT3G12545,AT1G78970,AT2G25740,AT1G12070,AT5G40090,AT1G08170,AT3G49460,AT1G55915,AT1G06710,AT4G17060,AT4G32530,AT5G59480,AT1G21550,AT2G32840,AT5G53440,AT4G28130,AT3G27240,AT5G41560,AT2G40490,AT4G29780,AT3G60480,AT5G39340,AT1G20750,AT5G55780,AT2G36450,AT5G41640,AT3G59150,AT3G17152,AT1G32510,AT1G60940,AT5G14680,AT4G02430,AT1G14210,AT4G20320,AT5G39970,AT5G13460,AT3G11840,AT3G09650,AT1G23070,AT4G31615,AT1G63490,AT4G19550,AT3G12770,AT5G03160,AT4G15940,AT3G07550,AT5G11140,AT4G01170,AT1G74410,AT4G09720,AT5G37090,AT2G28420,AT1G34760,AT1G77230,AT5G28220,AT1G80360,AT5G12230,AT1G75680,AT3G25780,AT5G55020,AT3G26470,AT4G19830,AT2G04070,AT5G65140,AT3G30810,AT1G18920,AT3G57410,AT3G13490,AT3G51500,AT5G58540,AT5G57655,AT5G58782,AT3G45700,AT3G20050,AT3G53530,AT5G44940,AT4G02310,AT5G35980,AT2G22190,AT1G69510,AT2G25140,AT5G61030,AT4G18300,AT2G30080,AT3G62170,AT2G41000,AT4G22050,AT3G44280,AT1G75640,AT5G11650,AT5G24390,AT1G75910,AT1G35550,AT3G51550,AT4G00790,AT5G35770,AT3G27660,AT1G50940,AT5G11980,AT3G22250,AT3G59640,AT2G47650,AT1G14320,AT3G06040,AT5G47600,AT1G80410,AT5G02330,AT1G54217,AT1G64090,AT2G24390,AT2G32500,AT1G05250,AT4G37480,AT3G15500,AT4G14440,AT4G33750,AT4G14780,AT5G09670,AT4G05570,AT1G16380,AT1G07700,AT4G37420,AT3G56200,AT2G23740,AT1G68670,AT1G73020,AT3G19050,AT1G01260,AT3G30530,AT4G33495,AT3G48010,AT2G16120,AT3G10740,AT3G59740,AT5G53590,AT4G33890,AT1G09157,AT3G46270,AT1G74170,AT3G61140,AT3G15420,AT1G02500,AT2G30240,AT1G73680,AT2G44578,AT4G23960,AT2G42810,AT1G34575,AT4G10100,AT2G36650,AT1G63520,AT2G27970,AT4G13720,AT1G74700,AT3G10690,AT1G63780,AT3G14070,AT4G03750,AT4G38540,AT4G37970,AT5G52250,AT1G48300,AT1G28590,AT5G63790,AT5G61040,AT3G42120,AT1G55380,AT1G75770,AT5G24580,AT3G22550,AT2G39100,AT1G15410,AT2G14810,AT5G56020,AT2G19110,AT2G42270,AT5G55640,AT3G53170,AT1G78620,AT1G77370,AT3G20890,AT2G28350,AT3G19010,AT3G59940,AT5G54745,AT4G02860,AT4G25300,AT5G39690,AT1G61930,AT1G35150,AT4G28090,AT3G58400,AT1G49960,AT4G33430,AT3G56330,AT1G08660,AT3G51860,AT4G16260,AT2G04795,AT3G44400,AT3G62650,AT3G12240,AT5G39480,AT3G13670,AT3G58510,AT4G32190,AT5G10080,AT2G44890,AT4G18110,AT3G52720,AT1G48600,AT5G55710,AT1G18810,AT5G48850,AT4G34630,AT1G80560,AT5G09340,AT5G21930,AT5G45275,AT2G34560,AT1G01790,AT1G31640,AT4G17895,AT1G72030,AT5G07080,AT4G20350,AT5G06740,AT1G69480,AT4G17800,AT1G02220,AT2G02660,AT4G03570,AT2G27760,AT1G09080,AT1G55170,AT3G52740,AT3G56980,AT3G60730,AT1G25580,AT4G05000,AT5G10120,AT3G01490,AT1G54095,AT1G77220,AT4G26330,AT5G52890,AT3G03630,AT4G17410,AT1G20940,AT4G24470,AT5G06680,AT1G80520,AT2G16570,AT1G30960,AT1G12080,AT2G41980,AT1G79500,AT3G07720,AT4G22840,AT3G21580,AT4G34170,AT3G23820,AT2G44870,AT1G02700,AT1G68580,AT1G57680,AT4G01670,AT3G62360,AT3G48930,AT1G68640,AT1G19940,AT2G40360,AT4G28200,AT4G09300,AT1G77400,AT2G26360,AT4G26560,AT3G47850,AT5G35570,AT4G17880,AT1G21120,AT4G38620,AT3G25680,AT1G75180,AT4G05430,AT3G55640,AT2G41010,AT1G62060,AT3G44830,AT5G66010,AT5G52750,AT3G48470,AT1G54680,AT3G27070,AT4G27500,AT1G63770,AT4G21280,AT5G49530,AT3G13680,AT3G06700,AT1G54200,AT3G53180,AT5G56980,AT2G42330,AT1G60720,AT4G34440,AT5G02840,AT5G08390,AT1G08910,AT2G46200,AT1G77600,AT2G20660,AT5G11390,AT1G23330,AT1G61210,AT3G11890,AT4G37020,AT1G05520,AT1G24520,AT5G16610,AT5G42260,AT2G14460,AT1G43580,AT1G77090,AT2G32550,AT1G31630,AT3G18090,AT4G22420,AT1G07615,AT4G00900,AT4G12420,AT4G26370,AT1G67150,AT5G60910,AT5G06400,AT2G19300,AT1G59660,AT4G27670,AT3G53850,AT2G42470,AT1G54110,AT1G23460,AT2G31900,AT5G52850,AT1G74920,AT4G31040,AT4G02870,AT5G51470,AT4G32285,AT5G52220,AT3G01070,AT5G49600,AT4G02100,AT2G14060,AT5G02600,AT5G56070,AT2G46940,AT5G09790,AT2G18880,AT2G27160,AT3G15990,AT1G78260,AT4G17340,AT1G74420,AT4G15680,AT1G34670,AT5G66000,AT5G10350,AT5G43820,AT3G55160,AT4G30620,AT4G31780,OBSOLETE,AT5G46320,AT1G07150,AT3G52730,AT4G26100,AT1G36070,AT4G29410,AT1G51370,AT3G10300,AT4G30530,AT1G01980,AT2G35640,AT1G48740,AT2G17190,AT5G48660,AT1G06410,AT5G02100,AT1G07960,AT1G30170,AT1G10820,AT3G36659,AT3G57420,AT5G07480,AT1G32420,AT4G38170,AT4G33820,AT2G20100,AT3G19150,AT3G63480,AT4G29380,AT2G42460,AT1G59960,AT4G18430,AT2G33290,AT2G44300,AT2G32970,AT1G48750,AT5G37450,AT3G06240,AT1G31340,AT1G70190,AT5G48170,AT1G33030,AT3G58380,AT4G38590,AT1G32500,AT2G28760,AT1G12060,AT3G61320,AT1G34500,AT5G11360,AT2G03020,AT5G15190,AT1G31420,AT4G19030,AT2G01390,AT3G27380,AT4G22350,AT5G52360,AT3G22050,AT1G71840,AT2G15600,AT5G27640,AT4G15550,AT3G21610,AT2G32310,AT5G44450,AT2G23620,AT5G46840,AT4G09800,AT5G27210,AT1G80850,AT5G44880,AT2G36050,AT1G15750,AT3G15358,AT5G55380,AT1G72080,AT2G19330,AT1G03220,AT3G12600,AT5G66480,AT2G26580,AT1G21170,AT4G16080,AT5G01510,AT4G10030,AT5G46570,AT1G06750,AT5G34940,AT4G12640,AT1G18740,AT3G11350,AT5G54630,AT3G44160,AT3G28180,AT3G47980,AT2G05400,AT5G56810,AT1G05140,AT4G31630,AT4G12460,AT3G54870,AT2G34360,AT1G53190,AT1G44010,AT4G10390,AT5G60460,AT4G05040,AT1G44875,AT1G77890,AT4G25160,AT5G22280,AT5G06570,AT4G23560,AT2G35150,AT2G44970,AT3G58950,AT3G46240,AT4G24950,AT2G26190,AT4G20680,AT2G36130,AT3G45230,AT1G35620,AT1G52620,AT5G42920,AT1G32970,AT1G59550,AT1G53490,AT4G09490,AT1G31470,AT1G27370,AT4G33100,AT1G35750,AT1G72980,AT5G17680,AT1G18800,AT5G15040,AT4G34180,AT1G10500,AT5G26910,AT4G04910,AT1G13270,AT2G36470,AT4G00990,AT3G10140,AT3G02390,AT5G12910,AT5G56620,AT1G76740,AT3G27880,AT3G11030,AT3G20800,AT4G37470,AT2G28160,AT1G03020,AT4G12320,AT3G52800,AT5G04110,AT5G02560,AT2G38000,AT4G36900,AT1G15570,AT1G23290,AT1G75000,AT4G27420,AT1G28290,AT1G51290,AT1G69810,AT1G22630,AT3G59530,AT5G19070,AT4G15096,AT3G56090,AT1G44130,AT1G69230,AT4G39450,AT1G66080,AT4G07480,AT2G21490,AT3G08560,AT2G34900,AT2G39640,AT3G47250,AT3G61570,AT1G71980,AT3G44720,AT1G18260,AT5G45930,AT2G18140,AT4G23630,AT1G12300,AT2G03530,AT1G03290,AT4G15390,AT1G74780,AT3G04830,AT2G15090,AT3G54660,AT3G13438,AT3G24110,AT5G14660,AT1G23540,AT5G54940,AT3G27970,AT5G52510,AT5G16920,AT5G22430,AT1G61795,AT3G61890,AT3G53590,AT4G12790,AT3G62270,AT5G66730,AT2G33990,AT1G34170,AT1G12520,AT4G21260,AT1G06290,AT2G34260,AT4G09760,AT2G20920,AT1G35770,AT1G53165,AT4G36500,AT1G06690,AT5G60200,AT4G05450,AT5G16070,AT1G62250,AT1G04530,AT2G11370,AT3G51350,AT5G37620,AT5G14570,AT5G61510,AT2G46560,AT1G50790,AT4G04720,AT1G56110,AT2G40140,AT4G38240,AT5G09700,AT5G26130,AT1G79020,AT3G61090,AT3G42490,AT4G03410,AT1G01550,AT3G50420,AT1G16460,AT5G10200,AT3G46860,AT5G41220,AT1G70820,AT5G53280,AT1G49400,AT5G07280,AT2G25510,AT1G70350,AT1G77750,AT3G23540,AT1G13470,AT1G18080,AT3G09880,AT1G03260,AT2G44930,AT5G03820,AT1G45616,AT1G46840,AT1G06910,AT3G54300,AT2G04210,AT5G58730,AT1G55130,AT4G35010,AT3G03510,AT1G60470,AT4G23410,AT1G08570,AT2G26730,AT1G54290,AT3G10113,AT1G16340,AT2G38940,AT5G09600,AT2G30110,AT3G25610,AT1G04250,AT5G61720,AT5G38550,AT1G79770,AT4G01800,AT1G01840,AT3G04190,AT2G27170,AT5G56250,AT2G15000,AT2G40770,AT5G13970,AT2G44710,AT1G21710,AT5G48760,AT1G15060,AT1G44575,AT3G46580,AT3G01430,AT5G14730,AT5G17280,AT2G05330,AT3G20220,AT3G52072,AT5G59660,AT1G14580,AT2G46700,AT5G50190,AT1G63830,AT2G25930,AT4G27550,AT5G07160,AT4G27940,AT5G53250,AT2G29750,AT3G47160,AT1G22700,AT2G23110,AT3G10070,AT2G39130,AT1G45130,AT3G50310,AT1G29370,AT3G02860,AT2G29880,AT2G19280,AT1G44870,AT3G01480,AT2G28305,AT5G62280,AT3G06600,AT3G61010,AT1G14560,AT5G47240,AT2G45570,AT4G13880,AT2G40270,AT5G18800,AT2G43020,AT4G23570,AT3G56760,AT5G65170,AT3G03370,AT1G07910,AT4G09100,AT3G46380,AT2G13660,AT5G64170,AT3G13784,AT4G20060,AT1G43690,AT5G17410,AT3G43980,AT2G42940,AT3G54630,AT5G03780,AT5G67130,AT4G35750,AT2G19630,AT1G54360,AT5G67140,AT5G17660,AT4G35460,AT5G43350,AT2G48150,AT5G57210,AT2G20580,AT1G01540,AT1G48660,AT4G31530,AT3G13450,AT4G31560,AT5G43450,AT4G38560,AT1G23790,AT4G10480,AT1G70400,AT3G10700,AT4G20860,AT1G26140,AT1G72120,AT2G01450,AT5G62520,AT4G36700,AT2G20770,AT1G57540,AT5G08100,AT5G15200,AT1G47603,AT3G16750,AT1G76010,AT1G63840,AT1G73150,AT3G01060,AT3G20620,AT4G18340,AT4G32400,AT3G43500,AT4G30580,AT2G30695,AT4G37430,AT2G36350,AT1G63350,AT2G44180,AT4G26220,AT5G44120,AT2G45890,AT5G24710,AT2G27690,AT3G45710,AT1G50500,AT4G08390,AT1G30350,AT1G23710,AT5G17170,AT3G26630,AT1G01810,AT4G17810,AT4G23640,AT2G47900,AT5G22670,AT5G57240,AT4G09670,AT1G07570,AT5G36160,AT2G19980,AT5G02000,AT1G68650,AT4G22860,AT3G16900,AT2G28150,AT3G49250,AT5G24352,AT2G47460,AT1G04430,AT3G25600,AT1G76310,AT1G34030,AT3G07950,AT5G02800,AT5G16150,AT2G21600,AT1G72660,AT1G26680,AT2G07750,AT5G40330,AT1G79730,AT2G25970,AT1G55560,AT3G43570,AT1G64720,AT1G54570,AT4G34390,AT2G46070,AT4G30280,AT2G12100,AT3G50380,AT4G15690,AT5G15990,AT3G21830,AT3G43990,AT1G77760,AT4G17850,AT4G03110,AT1G58227,AT5G62970,AT3G06200,AT1G07230,AT1G26340,AT3G10820,AT3G59670,AT1G22600,AT3G21750,AT4G35030,AT3G63280,AT3G45080,AT2G32905,AT2G22370,AT3G20460,AT1G10420,AT3G12680,AT5G45830,AT2G43690,AT1G19580,AT1G49570,AT5G38070,AT4G31420,AT4G38030,AT3G11920,AT4G36360,AT5G11450,AT4G40060,AT5G64070,AT4G37890,AT5G61570,AT5G60520,AT1G53160,AT2G23680,AT1G18360,AT2G17410,AT5G27110,AT5G43540,AT4G34135,AT3G21270,AT4G39370,AT5G43680,AT3G04290,AT3G58760,AT5G17690,AT2G07170,AT4G29050,AT2G28010,AT1G27540,AT5G64960,AT1G70270,AT1G76720,AT5G58410,AT5G65160,AT3G55940,AT3G58150,AT1G53910,AT1G18170,AT2G47050,AT1G61920,AT4G00231,AT1G16180,AT5G12020,AT5G38190,AT5G55030,AT5G27030,AT2G44620,AT3G29220,AT2G40300,AT4G13730,AT5G07360,AT1G45180,AT4G12720,AT2G17210,AT5G65800,AT4G31230,AT3G56870,AT4G37900,AT5G54890,AT3G50480,AT3G22840,AT4G09160,AT1G16590,AT4G10000,AT1G29700,AT1G49560,AT1G61980,AT4G26980,AT4G16570,AT2G09970,AT4G12980,AT3G49160,AT3G19910,AT1G02960,AT2G25580,AT1G48030,AT5G49300,AT1G02860,AT2G41870,AT3G44480,AT3G05240,AT2G21630,AT4G05120,AT4G27720,AT2G03010,AT1G03940,AT1G03650,AT3G23460,AT4G15180,AT1G55810,AT3G30210,AT5G52380,AT5G22630,AT2G39720,AT2G23530,AT1G11760,AT1G70090,AT2G26890,AT1G18970,AT4G08200,AT5G64430,AT5G22990,AT5G66210,AT5G63420,AT3G47540,AT1G72940,AT1G16080,AT5G05910,AT5G49720,AT5G22850,AT3G24160,AT2G25090,AT4G19160,AT1G27670,AT4G18260,AT1G17010,AT4G34150,AT4G10040,AT5G40490,AT2G41110,AT1G80900,AT2G20750,AT3G09750,AT2G01820,AT2G43490,AT1G27270,AT2G39300,AT1G63130,AT2G35360,AT5G67080,AT3G53330,AT5G49680,AT5G02630,AT2G46970,AT5G64870,AT3G10600,AT5G17430,AT3G42150,AT2G41440,AT1G25988,AT1G27410,AT3G26960,AT4G16560,AT5G43110,AT5G42250,AT4G30830,AT4G21370,AT5G01060,AT5G27090,AT5G13660,AT2G34990,AT5G17510,AT1G79630,AT1G12000,AT5G41670,AT3G46480,AT5G36710,AT4G29360,AT3G12390,AT4G04330,AT5G52690,AT4G33920,AT1G01950,AT4G26790,AT3G26270,AT1G44446,AT5G64670,AT3G03400,AT5G46340,AT3G13470,AT3G51320,AT1G47600,AT1G05350,AT5G01280,AT4G39170,AT5G57010,AT1G18310,AT5G61440,AT3G16160,AT1G12320,AT5G44080,AT4G05230,AT2G20340,AT1G68390,AT2G37570,AT1G59920,AT4G38460,AT3G11500,AT2G23920,AT2G29770,AT4G25130,AT3G53670,AT1G06130,AT4G39040,AT4G12920,AT1G22940,AT3G15240,AT3G51950,AT5G52870,AT3G23620,AT2G07310,AT5G24380,AT3G49650,AT5G65490,AT5G37210,AT1G70080,AT5G65683,AT4G13830,AT4G01290,AT2G32900,AT4G26520,AT3G17270,AT5G48670,AT3G57330,AT3G42180,AT1G29740,AT3G02850,AT3G02540,AT1G67880,AT4G04320,AT5G36130,AT3G05940,AT5G61430,AT5G59910,AT2G37230,AT4G12580,AT3G51171,AT1G80180,AT1G44000,AT2G25780,AT4G22680,AT1G53590,AT1G29570,AT1G75820,AT5G60620,AT4G10540,AT2G35950,AT4G25030,AT4G36090,AT1G52600,AT5G10400,AT4G29860,AT3G18960,AT3G48920,AT3G22160,AT1G13990,AT3G54810,AT2G42560,AT1G09420,AT2G18840,AT4G16790,AT1G30950,AT1G26900,AT3G54240,AT1G23910,AT5G54290,AT4G25020,AT1G59560,AT5G48240,AT4G16840,AT1G44090,AT4G37450,AT4G10950,AT5G50510,AT1G07390,AT5G46790,AT5G14860,AT5G59790,AT5G46370,AT1G08315,AT1G20810,AT3G42400,AT4G24910,AT5G58320,AT2G05940,AT1G23950,AT5G45690,AT1G64110,AT1G05340,AT2G18210,AT5G40390,AT3G47370,AT3G48690,AT1G25230,AT1G17690,AT1G52980,AT1G67670,AT2G44700,AT1G50630,AT3G54960,AT1G75170,AT1G07473,AT3G46330,AT2G33320,AT4G24000,AT1G33760,AT1G33540,AT5G08560,AT2G24580,AT2G31650,AT2G17750,AT5G38590,AT4G13100,AT1G51490,AT2G33530,AT1G21090,AT1G71695,AT2G24270,AT5G38570,AT2G06700,AT1G27910,AT3G61930,AT3G14760,AT4G21920,AT3G53070,AT4G01840,AT2G17620,AT1G02000,AT2G04790,AT4G31290,AT4G14850,AT3G25470,AT1G70280,AT3G05960,AT1G20450,AT1G35940,AT5G52020,AT4G08990,AT2G18710,AT3G57800,AT4G15930,AT4G02070,AT1G70140,AT4G39470,AT2G21140,AT1G79010,AT4G08350,AT4G15700,AT5G04480,AT4G02030,AT3G03680,AT3G23970,AT5G10920,AT1G44050 GAETA_COMMVARSU_DIPLOID-PROGENITORS-B.RAPA_B.OLERACEA_UP Up-regulated expression (oler_rapa_FDR_average_CommVarsu) between the diploid progenitors B. rapa and B. oleracea (Dataset S1 PubmedID:19274085) AT4G12300,AT3G03000,AT3G56990,AT4G37120,AT1G53430,AT3G45440,AT2G47030,AT4G02180,AT1G31820,AT1G31710,AT1G17130,AT5G02040,AT3G52810,AT5G35730,AT5G01420,AT3G03690,AT1G23680,AT5G66850,AT3G14415,ATCG01020,AT5G44550,AT5G53670,AT1G53690,AT3G25900,AT1G30280,AT5G16860,AT1G26410,AT3G10810,AT4G25620,AT1G55390,AT2G35940,AT5G62620,AT5G05890,AT4G14050,AT3G24540,AT5G63730,AT1G62770,AT2G26500,AT3G12100,AT3G09260,AT3G14170,AT1G60130,AT1G29840,AT3G20230,AT4G38570,AT5G60300,AT1G14940,AT3G11600,AT5G58003,AT4G32640,AT3G14130,AT2G36750,AT5G52500,AT4G21780,AT3G14400,AT3G11540,AT5G67450,AT5G56500,AT3G09510,AT5G62720,AT2G45290,AT2G42840,AT5G63100,AT5G53650,AT1G21245,AT3G44326,AT3G08720,AT1G22710,AT3G51460,AT2G46580,AT1G78980,AT3G51810,AT5G22690,AT5G25780,AT1G68410,AT5G51980,AT5G52820,AT4G02050,AT4G17160,AT1G73860,AT2G40940,AT1G60450,AT2G07560,AT5G17950,AT5G56190,AT1G62220,AT5G04910,AT4G39420,AT2G37640,AT5G38050,AT5G01930,AT1G22050,AT3G48630,AT2G21780,AT1G10290,AT2G36680,AT5G57480,AT5G04000,AT1G50200,AT3G23685,AT5G63340,AT2G37990,AT3G60210,AT5G45920,AT5G21105,AT3G54680,AT5G03620,AT1G26670,AT2G47780,AT3G08500,AT1G60200,AT5G14060,AT3G56800,AT5G22820,AT2G36970,AT5G06000,AT5G27600,AT1G54100,AT3G20120,AT3G60890,AT3G04280,AT1G57990,AT1G77800,OBSOLETE,AT1G68740,AT1G66030,AT5G51620,AT4G13040,AT5G11080,AT5G04930,AT3G61830,AT2G35580,AT5G43570,AT1G34380,AT3G23560,AT5G23200,AT5G37610,AT2G01210,AT5G01630,AT2G47830,AT5G07970,AT1G02880,AT2G38320,AT1G15720,AT4G15430,AT2G36540,AT1G17450,AT1G52060,AT2G38840,AT2G04900,AT4G17120,AT1G04630,AT2G39140,AT2G23590,AT4G31690,AT2G13560,AT5G52170,AT5G46820,AT5G42350,AT5G43650,AT5G67460,AT3G15180,AT5G22130,AT1G28220,AT5G63550,AT1G80190,AT2G26670,AT3G60660,AT4G25450,AT4G14140,AT3G59710,AT5G55490,AT2G32100,AT5G49900,AT1G71880,AT5G49280,AT1G67740,AT5G33393,AT1G28120,AT3G26390,AT1G71110,AT1G09200,AT2G26190,AT4G13650,AT1G17370,AT4G26470,AT5G52190,AT2G27010,AT2G40570,AT5G45440,AT2G26460,AT1G60815,AT3G11620,AT5G15080,AT4G21580,AT1G60530,AT1G53470,AT1G63460,AT2G03270,AT5G02810,AT3G11740,AT2G34150,AT5G60100,AT5G62070,AT2G38120,AT1G61130,AT3G15120,AT5G58770,AT3G56480,AT3G03970,AT5G44350,AT5G23900,AT5G39440,AT2G41460,AT3G46640,AT5G02290,AT1G02260,AT1G06030,AT1G22220,AT4G12370,AT1G05550,AT3G51360,AT2G35260,AT2G26650,AT5G03480,AT3G04430,AT1G13750,AT5G04030,AT1G09130,AT2G10930,AT1G49540,AT3G44760,AT1G73540,AT1G61540,AT3G01820,AT3G49700,AT5G59840,AT5G66690,AT5G28410,AT5G13310,AT1G19400,AT1G43890,AT1G10660,AT1G08590,AT5G24300,AT1G07790,AT2G29640,AT1G49660,AT5G53350,AT3G29590,AT5G25950,AT1G66270,AT5G08740,AT5G16270,AT3G62910,AT2G35390,AT2G05170,AT2G45680,AT3G10670,AT1G69400,AT3G26500,AT5G25280,AT3G26600,AT3G04370,AT1G24020,AT4G32480,AT1G27770,AT1G73440,AT4G26020,AT1G63570,AT2G27000,AT5G03310,AT1G59790,AT5G14500,AT5G10900,AT4G34430,AT5G48380,AT1G52370,AT5G52882,AT3G46040,AT3G53600,AT5G58820,AT5G15540,AT2G39810,AT3G14050,AT1G32740,AT4G26530,AT1G48630,AT3G41979,AT2G32487,AT5G37390,AT5G34940,AT5G10450,AT1G07230,AT3G16540,AT1G19540,AT3G24900,AT3G47090,AT2G41680,AT2G27360,AT2G26850,AT4G00580,AT5G55100,AT3G48730,AT5G59850,AT5G30495,AT1G28590,AT2G21540,AT1G66140,AT1G30870,AT4G21270,AT3G06380,AT1G15550,AT1G09500,AT4G22760,AT3G63200,AT1G23570,AT2G37430,AT3G17720,AT2G24765,AT5G42590,AT1G15790,AT5G46170,AT1G73810,AT1G12240,AT5G02470,AT1G22130,AT3G61270,AT2G01480,AT2G22800,AT5G67240,AT3G27550,AT1G31812,AT5G17900,AT1G50740,AT3G04550,AT1G65920,AT4G01580,AT5G09670,AT5G43130,AT3G13380,AT1G29460,AT3G07690,AT1G17990,AT3G43680,AT1G60240,AT3G51990,AT1G76830,AT1G19130,AT4G37380,AT3G60250,AT2G18720,AT3G25230,AT3G19270,AT3G12950,AT1G06240,AT4G35070,AT5G45740,AT2G37720,AT4G38680,AT2G05210,AT4G39370,AT2G29690,AT1G54730,AT2G37800,AT3G15950,AT2G36230,AT5G04010,AT2G13640,AT1G51070,AT3G28720,AT1G13320,AT3G62310,AT2G24040,AT5G23980,AT3G61600,AT2G34655,AT1G03350,AT3G28150,AT5G03040,AT3G52905,AT2G20710,AT3G01890,AT4G11980,AT2G42930,AT5G24880,AT4G33780,AT1G16030,AT1G53940,AT3G30250,AT5G01290,AT3G51510,AT5G28020,AT5G46910,AT5G63260,AT5G62350,AT1G54250,AT5G62470,AT1G67510,AT4G26990,AT2G29190,AT1G67430,AT3G44340,AT1G10280,AT5G63560,AT1G34180,AT1G55230,AT5G22220,AT3G49230,AT5G39620,AT1G27260,AT3G51890,AT2G47480,AT5G13030,AT5G12340,AT5G14880,AT1G27350,AT5G10300,AT3G15290,AT5G56390,AT1G23460,AT4G00330,AT5G47190,AT2G46090,AT4G11050,AT2G31510,AT2G28200,AT3G54090,AT4G09040,AT5G38460,AT3G57970,AT1G15060,AT1G03880,AT5G49970,AT5G46340,AT5G19860,AT3G19640,AT2G05850,AT3G26310,AT3G24520,AT3G50890,AT3G28790,AT1G47990,AT2G46520,AT5G07420,AT3G55690,AT3G59480,AT1G48450,AT5G66750,AT3G57200,AT5G47660,AT5G10790,AT3G44530,AT5G18380,AT1G51120,AT5G61680,AT5G48020,AT5G08710,AT4G01750,AT3G24880,AT5G02340,AT4G13290,AT5G10880,AT4G17010,AT3G04000,AT4G29370,AT5G08630,AT3G18240,AT3G58410,AT1G12940,AT3G18760,AT3G42640,AT5G14710,AT1G52030,AT5G27540,AT1G55500,AT4G11250,AT1G14660,AT3G17340,AT2G18530,AT2G17480,AT4G35130,AT1G62080,AT4G10450,AT4G10800,AT3G09700,AT2G44450,AT1G29450,AT5G38390,AT1G25025,AT2G19160,AT1G60430,AT2G02760,AT1G57820,AT1G77870,AT5G52860,AT5G05300,AT5G48880,AT5G57620,AT2G45650,AT4G10710,AT3G12977,AT2G45350,AT5G27560,AT1G72050,AT1G20520,AT1G12110,AT3G27490,AT5G59450,AT5G04620,AT1G30530,AT3G27473,AT1G68890,AT5G60050,AT5G13190,AT3G28880,AT1G30730,AT4G24510,AT5G07220,AT1G70490,AT5G23920,AT1G70250,AT4G18450,AT5G49800,AT2G39090,AT3G63430,AT1G71530,AT3G09310,AT4G02440,AT4G21330,AT5G18620,AT3G14650,AT3G60370,AT3G44860,AT2G23096,AT5G59150,AT1G09910,AT1G33750,AT2G46610,AT5G05090,AT2G47940,AT1G80270,AT5G10850,AT4G28510,AT2G07020,AT1G47610,AT2G14860,AT2G42650,AT5G46360,AT1G67680,AT4G07950,AT5G45490,AT2G22980,AT5G41340,AT2G47490,AT5G15640,AT5G25890,AT1G30520,AT3G33530,AT3G45860,AT2G20130,AT1G64890,AT3G26520,AT1G79550,AT4G29790,AT3G53420,AT3G51740,AT5G38130,AT1G69040,AT1G49475,AT1G55080,AT1G53020,AT4G01590,AT4G29710,AT1G02930,AT5G22810,AT1G13650,AT2G05380,AT1G55740,AT4G35090,AT4G09630,AT1G27400,AT3G19880,AT1G58280,AT5G61060,AT4G19380,AT5G06220,AT5G23170,AT5G43580,AT3G15570,AT4G38780,AT1G12480,AT1G33610,AT3G17530,AT1G17290,AT2G32540,AT4G18520,AT2G44100,AT5G28350,AT3G22090,AT5G50500,AT5G17090,AT5G57490,AT5G06480,AT5G63650,AT3G55280,AT2G31340,AT3G23210,AT4G19270,AT2G01620,AT2G21330,AT2G41210,AT2G17200,AT3G14270,AT4G29960,AT4G38210,AT5G45770,AT4G31960,AT1G49640,AT2G42790,AT3G11100,AT1G21830,AT5G06240,AT2G03230,AT2G41600,AT3G46010,AT1G30900,AT5G16210,AT3G48480,AT1G67310,AT3G60560,AT3G58730,AT2G03330,AT2G32240,AT2G25430,AT3G02000,AT1G01420,AT5G12330,AT1G29880,AT5G46090,AT1G70360,AT2G38650,AT5G13930,AT1G36050,AT4G29720,AT5G43080,AT5G64730,AT1G02050,AT5G60490,AT1G77060,AT4G00480,AT2G37600,AT5G44150,AT1G29800,AT5G16760,AT3G28650,AT4G26000,AT4G36030,AT1G32170,AT5G38650,AT1G16940,AT2G39370,AT3G43630,AT5G41010,AT5G28720,AT1G07310,AT4G10780,AT5G54380,AT3G60810,AT1G51360,AT5G67190,AT3G47590,AT1G77480,AT1G19110,AT1G50050,AT1G23080,AT3G18350,AT3G44500,AT1G26570,AT3G04450,AT3G62040,AT1G06210,AT1G47810,AT3G46170,AT4G18190,AT1G24260,AT3G03120,AT1G23050,AT5G18370,AT1G79640,AT3G60050,AT5G55130,AT5G15070,AT1G54770,AT5G18630,AT2G24480,AT4G11440,AT5G03900,AT2G26620,AT2G32170,AT4G22150,AT4G32830,AT1G06220,AT3G09290,AT2G40550,AT1G11700,AT5G53880,AT2G42410,AT5G09460,AT1G36670,AT3G51140,AT5G56910,AT2G18490,AT4G10080,AT1G15990,AT5G56550,AT1G75500,AT5G14590,AT4G21660,AT3G14075,AT5G24710,AT5G12480,AT2G20680,AT2G37280,AT2G19570,AT2G31980,AT4G15096,AT1G22270,AT4G13540,AT1G74500,AT1G66770,AT5G42030,AT3G01350,AT2G38440,AT5G64000,AT1G19640,AT2G30880,AT3G10480,AT2G17510,AT4G25610,AT3G53230,AT3G06810,AT3G05960 GAETA_COMMVARSU_DIPLOID-PROGENITORS-B.RAPA_B.OLERACEA_DN Down-regulated expression (oler_rapa_FDR_average_CommVarsu) between the diploid progenitors B. rapa and B. oleracea (Dataset S1 PubmedID:19274085) AT3G60540,AT5G53010,AT1G69010,AT5G57010,AT5G23110,AT3G51250,AT5G10760,AT2G26150,AT4G39360,AT1G18310,AT1G70250,AT5G51840,AT5G61440,AT2G22620,AT3G50640,AT4G03190,AT1G17580,AT3G22470,AT3G16160,AT4G31760,AT5G22110,AT1G12320,AT4G31770,AT5G51080,AT5G55920,AT5G13830,AT3G09100,AT3G23740,AT1G43040,AT5G44080,AT5G26260,AT4G05230,AT2G24260,AT3G08800,AT2G34490,AT5G18770,AT1G70310,AT2G20340,AT1G68390,AT4G26950,AT2G32400,AT5G64890,AT2G43930,AT2G46430,AT4G19530,AT3G22400,AT3G21720,AT4G20900,AT1G23530,AT3G42410,AT1G29030,AT4G35270,AT4G00430,AT1G05040,AT5G09870,AT2G37570,AT2G01290,AT1G59920,AT4G38460,AT1G13130,AT1G01780,AT3G11500,AT5G38900,AT3G11460,AT1G45100,AT5G53870,AT2G23920,AT2G29770,AT2G06690,AT4G25130,AT1G20120,AT3G44120,AT2G41910,AT3G53670,AT4G29670,AT3G06320,AT1G49810,AT1G75510,AT4G19720,AT1G22760,AT3G46690,AT4G03000,AT1G06130,AT5G63230,AT4G39040,AT4G12920,AT1G33265,AT1G66400,AT3G10530,AT1G22940,AT5G66060,AT5G56440,AT5G61865,AT2G38600,OBSOLETE,AT5G53330,AT4G25260,AT3G22810,AT5G05050,AT5G20500,AT3G15240,AT2G23310,AT1G70780,AT3G06550,AT4G33640,AT4G14870,AT4G05460,AT5G06060,AT4G14020,AT1G54510,AT2G35470,AT3G50800,AT4G33390,AT3G51950,AT4G13940,AT5G58290,AT1G71015,AT1G17510,AT4G28340,AT2G47700,AT4G40020,AT1G61550,AT5G42060,AT5G52870,AT2G14710,AT5G45670,AT3G23620,AT2G07310,AT4G26750,AT5G24380,AT3G24080,AT5G53430,AT3G20010,AT5G63050,AT3G49650,AT5G04900,AT3G04930,AT1G24440,AT1G71000,AT1G66200,AT3G43470,AT5G18190,AT5G20040,AT2G18810,AT3G03820,AT4G14103,AT3G15970,AT3G11000,AT4G32960,AT3G63000,AT1G07680,AT5G65490,AT5G61980,AT4G34730,AT5G57300,AT5G37210,AT4G38620,AT1G70080,AT5G05740,AT3G50870,AT1G19715,AT4G21890,AT3G23490,AT5G44220,AT1G14660,AT4G35985,AT5G45960,AT3G49340,AT5G65683,AT1G18900,AT4G19480,AT1G63580,AT3G48680,AT4G13830,AT1G07020,AT5G01210,AT4G34620,AT1G48610,AT4G01290,AT2G32290,AT4G11240,AT1G48175,AT4G07460,AT2G35460,AT2G32900,AT3G28450,AT3G21600,AT2G34980,AT4G26520,AT1G71440,AT4G22030,AT1G01340,AT5G67250,AT3G17270,AT5G65020,AT3G55520,AT5G48670,AT5G16820,AT3G07300,AT3G15350,AT2G36010,AT5G46580,AT5G09300,AT5G57565,AT3G57330,AT3G22900,AT1G73240,AT2G41590,AT5G49270,AT3G03310,AT1G20050,AT3G04800,AT4G26260,AT3G42180,AT5G64130,AT1G29740,AT1G11570,AT3G02850,AT3G02540,AT1G67880,AT2G37690,AT2G37380,AT3G20250,AT1G31920,AT4G04320,AT3G17070,AT2G43410,AT3G12050,AT1G70330,AT5G36130,AT3G21800,AT3G18860,AT3G46220,AT1G14420,AT5G48530,AT3G26460,AT1G17880,AT3G48820,AT3G05940,AT2G44880,AT4G22400,AT4G11640,AT5G61430,AT2G35030,AT5G59910,AT2G39840,AT3G48550,AT1G07590,AT5G15420,AT1G66000,AT4G36420,AT2G37230,AT3G22660,AT4G29310,AT1G36000,AT5G60280,AT5G18170,AT4G12580,AT5G55180,AT1G19940,AT5G08080,AT4G12410,AT5G53090,AT1G02980,AT3G51171,AT4G04030,AT5G05560,AT5G56050,AT3G29190,AT5G50530,AT1G80180,AT3G54600,AT4G39150,AT4G05350,AT1G44000,AT1G07850,AT3G52030,AT2G25780,AT1G69240,AT4G16100,AT4G11530,AT4G12240,AT4G22680,AT1G53590,AT2G36800,AT4G28910,AT5G51090,AT4G08450,AT3G55250,AT2G29830,AT1G29570,AT5G37580,AT2G03610,AT1G75820,AT1G10210,AT5G49650,AT3G30180,AT1G27450,AT1G48020,AT3G43450,AT5G60620,AT4G30550,AT4G16515,AT5G06460,AT5G60230,AT3G54770,AT4G10540,AT2G18920,AT2G35950,AT4G23610,AT1G64920,AT4G18030,AT3G04260,AT3G25770,AT5G22640,AT4G00850,AT4G25030,AT2G01140,AT2G23690,AT3G08910,AT1G49580,AT1G18010,AT2G05440,AT3G25855,AT4G17230,AT4G37460,AT4G36090,AT1G52600,AT3G13850,AT1G20890,AT4G11030,AT2G42670,AT5G10400,AT3G48040,AT4G25040,AT4G29860,AT3G49110,AT3G48760,AT3G18960,AT1G65310,AT1G14120,AT1G72300,AT4G04530,AT5G64220,AT4G37850,AT2G33700,AT3G48920,AT3G22160,AT5G06040,AT3G62090,AT1G13990,AT1G48460,AT3G02090,AT5G53600,AT4G36680,AT3G54810,AT2G30990,AT1G64830,AT2G24860,AT5G11160,AT3G56490,AT5G48310,AT2G42560,AT2G06000,AT3G17780,AT5G66100,AT4G14770,AT1G09420,AT2G18840,AT4G16790,AT1G30950,AT1G26900,AT5G56870,AT1G24360,AT3G49790,AT3G54240,AT1G63310,AT1G23910,AT5G51170,AT1G79760,AT5G13230,AT5G54290,AT3G15590,AT2G29570,AT1G67710,AT5G04470,AT5G42540,AT5G07070,AT4G07960,AT3G12090,AT4G25020,AT5G35400,AT1G59560,AT4G23510,AT5G48240,AT2G45280,AT3G54390,AT1G52470,AT3G57380,AT1G23690,AT3G57270,AT3G58300,AT4G10200,AT3G02920,AT4G16840,AT5G40760,AT4G26120,AT1G44090,AT4G37450,AT4G32010,AT3G27520,AT4G27820,AT3G57080,AT1G29730,AT4G14455,AT3G57950,AT4G33520,AT5G37600,AT4G24150,AT3G17690,AT1G17410,AT3G42240,AT2G29550,AT3G13080,AT5G61130,AT1G24490,AT4G21570,AT4G10950,AT2G15020,AT2G36000,AT5G50510,AT4G30710,AT3G28240,AT5G55940,AT1G07390,AT5G03850,AT1G76880,AT5G46790,AT5G14860,AT1G29550,AT5G53930,AT1G15020,AT1G10090,AT1G16360,AT5G59790,AT3G32930,AT5G63580,AT3G26030,AT3G62850,AT1G16710,AT4G38440,AT5G41060,AT4G15050,AT1G31750,AT1G43650,AT1G07650,AT1G69180,AT5G57780,AT4G13420,AT4G26190,AT1G34560,AT5G46370,AT5G27430,AT4G23360,AT4G32940,AT4G28140,AT3G52430,AT5G45530,AT2G19130,AT2G38250,AT5G56180,AT1G08200,AT1G08315,AT1G20810,AT3G09210,AT3G42400,AT3G12120,AT4G24910,AT3G45900,AT3G28500,AT3G03420,AT3G44560,AT3G28070,AT1G64100,AT4G14960,AT4G30580,AT1G55310,AT5G58320,AT2G18670,AT5G38410,AT2G20990,AT3G61880,AT4G12310,AT5G18040,AT3G48830,AT5G01820,AT1G20650,AT1G26810,AT2G05940,AT1G11340,AT5G48600,AT1G20370,AT2G27990,AT5G25220,AT1G28310,AT5G25120,AT1G72550,AT4G11790,AT1G16640,AT1G23950,AT5G45690,AT3G24590,AT5G65780,AT5G14930,AT1G71480,AT1G21530,AT1G64110,AT5G09900,AT3G24982,AT5G17720,AT1G05340,AT1G18090,AT5G14850,AT5G19890,AT2G30140,AT1G27600,AT2G26300,AT1G80600,AT2G31945,AT1G71940,AT4G36060,AT2G18210,AT5G43100,AT5G24460,AT4G13150,AT5G66790,AT3G03920,AT1G72390,AT3G12630,AT5G40390,AT4G19730,AT4G12730,AT5G07720,AT2G41570,AT4G39780,AT3G25260,AT5G54280,AT2G33050,AT2G27810,AT3G56560,AT3G60920,AT1G44760,AT2G21260,AT3G02420,AT3G62220,AT5G57250,AT1G51390,AT4G22910,AT3G47370,AT1G79600,AT3G29130,AT4G13370,AT2G15270,AT3G56790,AT1G02060,AT5G66280,AT3G48690,AT4G15610,AT5G41450,AT5G38830,AT1G66180,AT3G01960,AT5G63120,AT1G14030,AT1G25230,AT5G45650,AT5G47980,AT4G22490,AT1G60040,AT3G55650,AT1G43010,AT4G19990,AT4G00680,AT3G45410,AT5G42110,AT5G39865,AT1G09770,AT1G17690,AT1G68850,AT1G52980,AT5G54580,AT2G43350,AT5G03350,AT1G71050,AT1G67670,AT2G22010,AT2G44700,AT3G61640,AT3G16430,AT5G45250,AT1G50630,AT4G38080,AT5G45260,AT2G48090,AT1G22080,AT5G03200,AT1G18710,AT3G15010,AT3G22190,AT3G54960,AT1G23760,AT2G03520,AT3G45970,AT1G76740,AT2G35160,AT2G26640,AT4G10530,AT4G38880,AT2G44630,AT4G31580,AT5G63470,AT3G63150,AT5G47690,AT4G27700,AT1G21410,AT4G11490,AT1G75170,AT1G07473,AT3G46330,AT5G57330,AT4G13630,AT4G37700,AT1G33110,AT3G12650,AT5G61200,AT1G53750,AT2G40400,AT2G33320,AT1G78230,AT2G38920,AT4G19610,AT5G35830,AT4G24000,AT3G25585,AT1G33760,AT4G29120,AT5G58780,AT5G14540,AT1G33540,AT3G48720,AT5G08560,AT5G22020,AT4G37860,AT3G12430,AT4G15240,AT5G60590,AT2G24580,AT5G37870,AT2G31650,AT2G17750,AT2G31290,AT3G03510,AT5G66950,AT2G29780,AT5G06620,AT5G38590,AT5G41890,AT4G15910,AT2G40260,AT4G13100,AT1G10230,AT5G55740,AT1G60860,AT3G04620,AT4G33970,AT1G51490,AT2G33540,AT2G26860,AT2G32610,AT5G47170,AT2G20410,AT3G50980,AT2G33530,AT5G23060,AT4G36210,AT3G48150,AT5G24165,AT4G04730,AT1G13710,AT5G56710,AT1G26120,AT2G25570,AT5G20090,AT3G55180,AT3G49570,AT3G63280,AT3G13440,AT2G04270,AT1G21090,AT2G21030,AT3G12360,AT5G03830,AT5G61100,AT4G15510,AT1G20010,AT1G71695,AT2G24270,AT5G07220,AT5G38570,AT3G49560,AT3G61390,AT2G06700,AT2G38680,AT3G27400,AT5G02820,AT4G16540,AT5G24390,AT1G27910,AT1G63720,AT5G06960,AT1G58100,AT3G61930,AT4G20070,AT3G45760,AT1G19320,AT3G54780,AT3G14760,AT4G27180,AT4G25080,AT5G14570,AT1G64160,AT3G57540,AT4G27390,AT2G35670,AT4G21920,AT3G09930,AT4G24240,AT5G01770,AT3G42320,AT2G43445,AT3G53070,AT3G12860,AT3G01810,AT1G60090,AT4G39030,AT3G10340,AT2G36640,AT5G45860,AT5G35320,AT3G48780,AT4G15180,AT5G05660,AT4G01840,AT1G11820,AT2G40960,AT4G39860,AT5G20990,AT1G48990,AT2G10350,AT4G29490,AT3G56230,AT4G08380,AT3G02340,AT1G60230,AT5G14750,AT4G23720,AT1G20980,AT2G06960,AT1G52950,AT5G16486,AT3G44430,AT3G27680,AT5G58530,AT1G67120,AT5G18120,AT5G64380,AT2G17620,AT1G66460,AT5G38500,AT4G17870,AT3G62400,AT4G12050,AT5G46920,AT4G31120,AT1G52190,AT1G18630,AT1G02000,AT5G22180,AT3G61150,AT5G49240,AT5G47200,AT4G19470,AT2G04790,AT2G17920,AT1G53580,AT4G17480,AT2G30620,AT5G16230,AT4G31290,AT3G09390,AT3G05030,AT5G03795,AT4G14850,AT3G25470,AT4G35920,AT2G07770,AT4G20980,AT3G06720,AT4G10840,AT3G58250,AT3G57250,AT5G60440,AT1G70280,AT1G35420,AT5G52370,AT5G42640,AT5G64700,AT2G46570,AT1G56610,AT2G31610,AT2G47130,AT3G14080,AT5G54020,AT1G07470,AT4G28430,AT2G31710,AT5G66050,AT4G30490,AT2G21550,AT3G03210,AT2G27610,AT1G24330,AT3G47130,AT5G56820,AT1G21750,AT1G09440,AT5G40850,AT5G10930,AT1G61480,AT1G20450,AT1G35940,AT4G22690,AT5G52020,AT2G35970,AT4G08990,AT3G44550,AT1G42550,AT1G10780,AT2G18710,AT3G13772,AT5G62390,AT3G57800,AT4G15930,AT2G28250,AT4G02070,AT1G70140,AT5G54270,AT4G39470,AT3G28820,AT2G21140,AT1G79010,AT4G08350,AT4G15700,AT5G04480,AT4G02030,AT3G03680,AT3G23970,AT5G10920,AT1G44050 GAETA_ALLOPOLYPLOID/PARENT-MIX1200_COMMONVAR_UP Up-regulated genes that were nonadditively expressed in allopolyploid line 1200 relative to the 1:1 parent mix--parentmix_1200_FDR_CommonVar (Dataset S2 PubmedID:19274085) AT2G10350,AT3G57290,AT3G08960,AT4G01480,AT3G14430,AT5G17120,AT3G20240,AT5G15640,AT3G12090,AT5G66750,AT5G11080,AT2G28540,AT1G07310,AT5G03495,AT2G33540,AT5G01200,AT1G20440,AT1G70450,AT1G19090,AT1G64990,AT3G19790,AT2G24230,AT4G14270,AT5G61690,AT4G11690,AT5G56450,AT1G19360,AT3G42500,AT1G02780,AT3G12050,AT1G57570,AT3G49200,AT5G40030,AT5G50790,AT5G53380,AT2G42930,AT4G19720,AT3G14230,AT4G34200,AT1G19540,AT1G06210,AT4G17160,AT4G11240,AT3G50770,AT3G58600,AT5G09910,AT5G42800,AT1G15330,AT1G10780,AT4G11250,AT3G18830,AT3G18800,AT1G52060,AT4G29760,AT4G09960,AT1G23680,AT1G14810,AT1G09155,AT4G33780,AT1G80760,AT4G24340,AT2G05647,AT3G51360,AT5G50210,AT5G15790,AT4G28140,AT2G38920,AT4G10880,AT1G60010,AT1G02730,AT2G37690,AT4G32960,AT5G12360,AT1G34780,AT4G09070,OBSOLETE,AT1G77440,AT5G48080,AT1G21610,AT4G13650,AT1G53470,AT1G35515,AT1G05550,AT1G79430,AT3G04640,AT1G71110,AT4G15010,AT4G35140,AT3G02080,AT2G17050,AT3G19830,AT5G42590,AT3G62310,AT3G18580,AT4G00140,AT3G29090,AT1G08970,AT5G38710,AT5G12120,AT1G47730,AT4G15830,AT1G49640,AT1G43722,AT3G22650,AT1G20090,AT1G17400,AT1G51690,AT3G54530,AT3G50370,AT2G35160,AT1G32580,AT5G61910,AT3G45860,AT1G21050,AT4G37340,AT3G26510,AT3G15590,AT1G63570,AT2G42730,AT2G24040,AT5G46340,AT3G55005,AT4G31920,AT1G79040,AT5G01930,AT1G72550,AT2G19530,AT1G61290,AT1G14460,AT1G80930,AT1G44110,AT2G35030,AT5G53990,AT3G20330,AT2G20710,AT1G78700,AT1G70360,AT5G02810,AT2G37430,AT1G43040,AT2G34180,AT3G55605,AT1G60350,AT1G56010,AT1G01240,AT5G42670,AT3G29800,AT1G05540,AT5G26760,AT1G24620,AT3G55180,AT5G06710,AT5G20910,AT5G24950,AT1G09380,AT5G57250,AT4G23010,AT1G47840,AT5G45190,AT4G27040,AT5G66610,AT5G33393,AT1G66850,AT3G23270,AT5G01170,AT4G12470,AT3G23700,AT2G23910,AT4G35920,AT3G19900,AT4G37370,AT2G26150,AT1G62930,AT3G28690,AT5G41990,AT5G41040,AT5G61450,AT2G18380,AT3G60250,AT3G14290,AT5G52410,AT2G40570,AT3G03810,AT3G04620,AT3G26360,AT4G03510,AT1G14990,AT4G18950,AT5G22730,AT4G13070,AT3G52880,AT2G26670,AT5G62627,AT5G58470,AT4G25810,AT3G12440,AT5G62510,AT3G01200,AT4G15570,AT5G22410,AT5G53180,AT5G11430,AT3G61600,AT3G44560,AT1G28327,AT2G41230,AT3G27870,AT1G73290,AT3G27480,AT3G51990,AT1G07460,AT5G44550,AT1G10040,AT3G03490,AT5G16630,AT1G79250,AT3G22421,AT3G29350,AT5G22640,AT4G18080,AT1G17230,AT5G45920,AT2G40530,AT5G02820,AT1G79550,AT1G22690,AT2G36960,AT5G44060,AT3G43410,AT1G29860,AT2G27940,AT5G45810,AT4G02480,AT3G63200,AT2G31710,AT2G45650,AT3G54120,AT5G58870,AT4G14890,AT1G29820,AT3G23730,AT3G10430,AT2G14020,AT5G39865,AT3G01330,AT4G12370,AT1G08580,AT5G44070,AT1G17880,AT1G44090,AT3G10590,AT3G06500,AT1G63470,AT2G37680,AT2G35580,AT4G13860,AT2G32710,AT1G01280,AT2G42360,AT3G23990,AT5G42890,AT4G32140,AT1G60800,AT4G24860,AT4G16190,AT1G52450,AT3G27550,AT3G20580,AT4G30750,AT2G24860,AT2G44370,AT3G58010,AT2G41590,AT3G47910,AT1G42367,AT3G59400,AT5G63490,AT1G48175,AT3G15130,AT2G05000,AT4G24390,AT5G37890,AT3G22810,AT3G49030,AT5G11270,AT4G18170,AT1G32240,AT5G54220,AT3G23172,AT3G58260,AT3G51740,AT3G27473,AT3G47560,AT1G16610,AT2G19480,AT2G30790,AT2G37220,AT5G07220,AT3G25180,AT4G35985,AT5G51030,AT1G14350,AT4G17505,AT2G41310,AT3G25260,AT1G57990,AT2G17480,AT3G15210,AT5G10550,AT1G71530,AT3G20360,AT3G29575,AT2G27610,AT4G08300,AT3G62960,AT4G15720,AT1G51260,AT2G36980,AT2G32560,AT2G24720,AT3G11400,AT3G08700,AT2G38960,AT3G26390,AT4G38510,AT3G02210,AT5G16210,AT5G65270,AT3G04000,AT3G28345,AT5G38150,AT4G37300,AT5G60990,AT5G48600,AT4G30380,AT5G64580,AT1G53980,AT4G01525,AT3G24840,AT5G62920,AT4G26170,AT3G59360,AT1G18710,AT5G55160,AT1G02770,AT3G61570,AT1G48020,AT3G23210,AT3G19270,AT3G14880,AT5G23810,AT3G49055,AT5G51710,AT4G35890,AT4G21910,AT4G35480,AT2G18390,AT1G51710,AT1G54100,AT3G59330,AT2G42790,AT1G64100,AT3G10930,AT5G14100,AT4G07960,AT1G80280,AT3G25790,AT3G55520,AT1G53020,AT5G56680,AT4G13260,AT4G13950,AT5G23930,AT4G35100,AT4G00755,AT4G21960,AT5G61100,AT3G06220,AT1G52280,AT1G01200,AT2G18400,AT4G33670,AT5G24300,AT1G53690,AT2G04410,AT1G72140,AT5G24480,AT5G28500,AT5G02350,AT3G59810,AT2G21900,AT5G58820,AT5G54530,AT1G75790,AT5G51040,AT1G07720,AT3G10030,AT1G47220,AT1G61420,AT5G43630,AT2G36590,AT3G57530,AT5G01820,AT4G00190,AT3G22370,AT3G12180,AT2G44240,AT5G40370,AT5G55030,AT1G02060,AT5G05550,AT3G01990,AT4G04030,AT4G38230,AT5G58150,AT2G46230,AT2G05310,AT3G16530,AT4G33770,AT5G41450,AT3G25860,AT4G13400,AT2G40130,AT5G13310,AT3G29300,AT4G12490,AT3G23170,AT1G55940,AT2G01940,AT4G28910,AT1G32630,AT4G13960,AT4G36990,AT3G54600,AT3G04050,AT4G18730 GAETA_ALLOPOLYPLOID/PARENT-MIX1200_COMMONVAR_DN Down-regulated genes that were nonadditively expressed in allopolyploid line 1200 relative to the 1:1 parent mix--parentmix_1200_FDR_CommonVar (Dataset S2 PubmedID:19274085) AT1G17150,AT3G01860,AT1G26570,AT4G23660,AT3G15354,AT1G54770,AT1G54510,AT5G51530,AT3G50520,AT1G27030,AT3G01820,AT5G05820,AT1G09090,AT5G12110,AT3G62040,AT5G09690,AT5G34930,AT4G31180,AT5G65460,AT2G41000,AT2G25980,AT2G20680,AT1G48430,AT3G19990,AT4G26800,AT4G18780,AT1G26120,AT5G64550,AT2G22980,AT3G57490,AT2G48020,AT5G51300,AT1G03860,AT3G21980,AT2G20010,AT2G24260,AT4G08750,AT1G32500,AT1G60790,AT1G78430,AT1G79880,AT1G12230,AT5G66100,AT1G23760,AT5G36930,AT1G01060,AT2G20150,AT4G23610,AT2G37585,AT5G25120,AT4G36420,AT5G60380,AT5G13620,AT5G52170,AT3G48230,AT1G55560,AT5G04900,AT3G07510,AT5G53970,AT4G05460,AT5G01500,OBSOLETE,AT2G45680,AT5G25280,AT3G58950,AT5G06220,AT2G27630,AT1G64750,AT3G22190,AT4G02620,AT1G76320,AT1G80690,AT3G51660,AT1G54270,AT5G05010,AT1G76880,AT5G38630,AT5G24165,AT3G49560,AT2G13640,AT4G04480,AT5G47050,AT4G38190,AT1G71950,AT5G58580,AT4G19500,AT4G37630,AT1G29430,AT1G74050,AT5G24880,AT1G32280,AT1G61730,AT1G77750,AT5G58360,AT4G33710,AT3G05020,AT5G57120,AT2G44450,AT3G13850,AT1G36160,AT2G36640,AT4G19270,AT1G11710,AT1G72530,AT2G35300,AT4G10540,AT2G22690,AT4G10090,AT1G29090,AT1G33060,AT2G18910,AT1G53940,AT3G16430,AT3G19300,AT5G16890,AT5G09670,AT1G20980,AT4G30700,AT4G14380,AT3G28710,AT1G22290,AT2G42840,AT3G32047,AT2G33860,AT1G68660,AT1G51040,AT3G13222,AT3G03820,AT3G09690,AT5G49990,AT5G35520,AT3G04930,AT2G29800,AT4G10450,AT2G36330,AT5G22710,AT1G55030,AT1G21245,AT1G12725,AT5G63800,AT3G18430,AT2G10920,AT2G05380,AT2G46290,AT2G42870,AT3G45443,AT1G15960,AT3G21400,AT1G29450,AT5G22390,AT5G52820,AT4G33230,AT4G16380,AT5G48380,AT1G75470,AT3G22600,AT4G24610,AT3G11600,AT3G08510,AT5G60050,AT2G26190,AT1G71330,AT5G17890,AT1G62340,AT1G63310,AT1G53240,AT2G10070,AT3G51510,AT4G36830,AT3G21650,AT2G28870,AT2G32600,AT1G37020,AT4G12640,AT3G04450,AT2G02050,AT5G10900,AT1G77870,AT2G02590,AT4G20040,AT4G28530,AT1G53870,AT2G23590,AT5G47180,AT2G27330,AT1G33170,AT4G21680,AT4G21660,AT1G09830,AT3G04080,AT4G10050,AT3G12680,AT2G04750,AT4G24130,AT4G25540,AT5G63760,AT3G22400,AT4G11360,AT4G35910,AT3G58300,AT5G35450,AT2G02470,AT2G03360,AT3G16610,AT2G29580,AT1G14620,AT1G05730,AT5G45780,AT2G18720,AT3G04530,AT3G25500,AT3G08790,AT2G03270,AT2G43445,AT3G60920,AT3G42310,AT2G47490,AT1G19920,AT4G00300,AT3G08720,AT5G57150,AT3G50510,AT2G43560,AT4G15430,AT4G16040,AT4G17330,AT4G04930,AT2G37640,AT4G38240,AT1G65690,AT4G09080,AT3G61880,AT2G42210,AT5G27080,AT1G70140,AT2G32290,AT2G40850,AT5G53940,AT1G80840,AT1G14130,AT1G47810,AT3G01130,AT4G01280,AT5G57780,AT3G17740,AT2G30990,AT3G21370,AT2G30430,AT4G24175,AT3G55720,AT2G20950,AT5G63230,AT4G28300,AT4G35900,AT5G44230,AT5G23575,AT1G68450,AT3G56110,AT1G62170,AT5G63100,AT3G48630,AT5G04010,AT5G24790,AT5G22960,AT1G34180,AT5G53880,AT2G18530,AT3G50760,AT5G47690,AT1G53580,AT5G02460,AT5G19610,AT1G03880,AT3G20395,AT4G03930,AT3G10770,AT4G01630,AT2G41570,AT5G15840,AT2G17750,AT1G01720,AT4G18830,AT1G49380,AT3G23970,AT5G38340,AT4G31900,AT5G03830,AT1G13710,AT3G17500,AT4G28940,AT2G17740,AT1G61150,AT3G01840,AT5G57980,AT5G06460,AT5G34820,AT3G46840,AT1G36320,AT5G03680,AT5G10510,AT3G13600,AT2G45480,AT3G59160,AT5G59710,AT5G57840,AT3G18810,AT2G11010,AT5G64130,AT3G04700,AT3G42540,AT1G34750,AT5G45220,AT5G60590,AT5G20420,AT3G13820,AT1G29400,AT2G39050,AT1G20450,AT3G24540,AT1G60400,AT5G54270,AT5G15760,AT1G20950,AT1G29380,AT3G07050,AT1G07070,AT1G11580,AT4G02400,AT5G45440,AT2G35470,AT2G42080,AT4G15510,AT4G29240,AT5G26860,AT5G14760,AT4G01980,AT1G56240,AT1G30080,AT5G50870,AT5G07950,AT1G09310,AT2G07770,AT4G31830,AT1G30260,AT5G16230,AT1G77800,AT5G45530,AT5G56870,AT1G22660,AT5G27410,AT1G80190,AT1G51400,AT3G61390,AT5G13220,AT5G15080,AT3G03950,AT4G16900,AT4G34620,AT5G61700,AT3G17810,AT5G63550,AT5G59260,AT5G18630,AT3G11910,AT5G11540,AT5G35737,AT5G44350,AT1G28630,AT1G04780,AT2G40960,AT1G10110,AT2G15130,AT1G51320,AT1G43890,AT5G53450,AT5G50520,AT3G06890,AT2G40450,AT5G47880,AT1G09040,AT5G43650,AT1G32070,AT3G13710,AT1G23570,AT4G18010,AT5G63180,AT4G34490,AT3G45440,AT3G24290,AT4G14960 GAETA_ALLOPOLYPLOID/PARENT-MIX1200_PERGENEVAR_UP Up-regulated genes that were nonadditively expressed in allopolyploid line 1200 relative to the 1:1 parent mix--parentmix_1200_FDR_PerGeneVar (Dataset S2 PubmedID:19274085) AT2G10350,AT5G17120,AT1G70450,AT3G43410,AT1G44090,AT2G44820,AT1G15060,AT3G30210,AT2G25430,AT1G17750,AT1G68650,AT3G04280,AT1G34390,AT1G30000,AT3G30247,AT1G64890,AT2G45160,AT1G01420,AT3G61240,AT4G22940,AT3G21720,AT5G38460,AT3G01060,AT1G50050,AT4G29900,AT3G54750,AT1G52540,AT5G47370,AT5G38550,AT1G72190,AT1G06420,AT1G14850,AT3G59670,AT1G51480,AT5G48605,AT1G71860,AT5G40360,AT2G30010,AT5G57010,AT5G17160,AT5G05480,AT1G65470,AT4G39380,AT4G28180,AT5G17650,AT1G73580,AT3G13810,AT3G14510,AT1G63990,AT5G39800,AT1G67150,AT3G05530,AT5G36210,AT4G14250,OBSOLETE,AT3G02220,AT4G27670,AT4G17660,AT5G06820,AT2G10550,AT2G31400,AT4G38460,AT1G09850,AT5G13240,AT5G63170,AT1G77060,AT4G22190,AT3G32190,AT1G63400,AT1G69480,AT1G59560,AT3G07470,AT4G23690,AT2G47950,AT5G41640,AT1G19380,AT2G34640,AT4G37790,AT4G30320,AT4G37400,AT4G23640,AT5G65010,AT5G40490,AT5G40330,AT4G34830,AT4G09020,AT2G15620,AT4G31810,AT1G16290,AT5G24350,AT1G69990,AT5G19960,AT5G43140,AT2G01610,AT2G15530,AT2G31260,AT1G67800,AT3G07580,AT5G65180,AT4G33700,AT5G18140,AT5G26980,AT1G15440,AT5G27090,AT1G17940,AT3G08840,AT1G80660,AT4G23710,AT1G03340,AT2G25650,AT1G52810,AT5G41050,AT4G26370,AT5G26600,AT5G03420,AT5G04560,AT4G35220,AT1G15580,AT2G32130,AT1G56110,AT5G55500,AT3G12290,AT2G44930,AT1G26240,AT1G16540,AT3G08890,AT5G59880,AT5G19570,AT3G23440,AT2G23760,AT4G32980,AT3G25590,AT2G14810,AT3G20100,AT5G05990,AT5G04180,AT2G20360,AT4G28150,AT5G20300,AT4G27360,AT5G52600,AT5G03610,AT5G03650,AT5G67050,AT2G42220,AT2G37480,AT4G24740,AT4G26080,AT3G14090,AT1G64660,AT5G54060,AT5G41460 GAETA_ALLOPOLYPLOID/PARENT-MIX1200_PERGENEVAR_DN Down-regulated genes that were nonadditively expressed in allopolyploid line 1200 relative to the 1:1 parent mix--parentmix_1200_FDR_PerGeneVar (Dataset S2 PubmedID:19274085) AT5G17870,AT4G30530,AT1G20800,AT4G14170,AT4G21500,AT1G62870,AT5G47470,AT3G25480,AT2G41640,AT3G23920,AT2G17720,AT4G22090,AT3G19640,AT4G03060,AT5G47900,AT5G41980,AT3G47240,AT3G53600,AT5G52470,AT3G26790,AT5G46970,AT3G09510,AT5G67210,AT4G37530,AT5G39910,AT1G34500,AT1G52620,AT3G25670,AT2G26890,AT3G12145,AT3G25020,AT4G11420,AT3G21270,AT3G49160,AT5G36940,AT5G46090,AT4G18940,AT4G39910,AT4G01600,AT5G48920,AT3G57110,AT5G37820,AT2G04040,AT5G58575,AT2G43690,AT3G49580,AT1G04860,AT2G15000,AT4G09300,AT1G22290,AT1G63130,AT3G63140,AT2G27240,AT1G69800,AT5G03530,AT2G30695,AT2G46070,AT4G16140,AT5G50510,AT5G15990,AT1G55130,AT4G12580,AT5G07790,AT5G58350,AT5G35930,AT1G30670,AT3G51150,AT5G52220,AT4G18020,AT1G03650,AT4G14530,AT1G19700,AT1G18970,AT3G57330,AT1G61795,AT2G22970,AT1G44674,AT3G26630,AT5G06850,AT2G45890,AT5G49910,AT5G47780,AT4G25020,AT5G13570,AT4G39370,AT1G47570,AT5G02540,AT2G19980,AT5G05370,AT5G02630,AT1G25230,AT5G22670,AT1G22860,AT2G45600,AT2G43020,AT2G34260,AT3G20220,OBSOLETE,AT1G74230,AT1G64110,AT1G29040,AT2G21650,AT5G15200,AT1G31680,AT5G20340,AT1G01980,AT1G77390,AT4G27720,AT1G13990,AT3G46330,AT2G35360,AT4G10950,AT2G33530,AT1G77810,AT3G06350,AT5G55470,AT1G67880,AT1G49760,AT4G33850,AT3G44460,AT5G11400,AT5G12000,AT2G20550,AT5G66450,AT3G03400,AT5G27100,AT3G47540,AT5G16150,AT3G22010,AT3G08940,AT4G03470,AT2G22850,AT3G17230,AT1G23950,AT1G51370,AT1G79280,AT4G25450,AT5G50710,AT5G62180,AT3G12390,AT4G00610,AT3G03140,AT5G53300,AT5G26780,AT1G74970,AT1G31490,AT4G03430,AT1G54030,AT1G31480,AT5G02600,AT2G26870,AT2G39210,AT3G22050,AT3G52090,AT5G59090,AT5G59670,AT3G26320,AT3G51090,AT4G29950,AT2G43220,AT5G66420,AT3G58120,AT3G52680,AT2G25780,AT1G09490,AT1G50630,AT4G25330,AT3G13890,AT1G63640,AT3G61120,AT1G79730,AT2G37800,AT3G56980,AT3G05960,AT5G26010,AT4G14370,AT5G23960,AT4G39890,AT1G12270,AT4G02920,AT2G46080,AT3G48290,AT5G06570,AT1G36160,AT4G29860,AT5G67150,AT5G27210,AT1G53520,AT1G49475,AT4G29100,AT5G15940,AT5G36130,AT4G36600,AT1G02830,AT5G07220,AT4G02990,AT3G51500,AT1G70090,AT2G18210,AT2G37600,AT4G17200,AT2G04790,AT1G80920,AT1G75180,AT3G46630,AT5G65170,AT1G06410,AT2G05410,AT1G72740,AT4G02500,AT2G17620,AT5G52450,AT3G50590,AT4G01180,AT2G05170,AT3G03380,AT1G61100,AT5G01510,AT2G29480,AT4G04760,AT1G26910,AT1G23740,AT2G21140,AT1G76920,AT2G19550,AT2G21630,AT2G36480,AT2G28250,AT4G18380,AT4G29330,AT3G53640,AT3G51460,AT4G11960,AT5G60610,AT2G45270,AT2G02560,AT4G17910,AT2G34500,AT1G25290,AT3G47980,AT4G02050,AT3G22230,AT5G45000,AT4G04690,AT3G62180,AT1G66940,AT2G24930,AT5G62080,AT1G10370,AT5G06740,AT4G08140,AT2G18840,AT4G28500,AT5G60160,AT4G29430,AT1G30950,AT1G68280,AT3G43970,AT3G21070,AT4G10420,AT1G51360,AT3G02930,AT2G18710,AT3G06130,AT2G37230,AT2G42840,AT1G05730,AT4G15430,AT3G48630,AT2G17750,AT3G24540 GAETA_ALLOPOLYPLOID/PARENT-MIX1250_PERGENEVAR_UP Up-regulated genes that were nonadditively expressed in allopolyploid line 1200 relative to the 1:1 parent mix--parentmix_1250_FDR_PerGeneVar (Dataset S3 PubmedID:19274085) AT1G20440,AT1G22990,AT3G49550,AT5G46340,AT5G38710,AT3G49510,AT2G44820,AT2G45160,AT2G05310,AT3G61240,AT2G38920,AT1G55610,AT1G71490,AT4G18905,AT2G25430,AT1G17750,AT5G47370,AT3G13810,AT4G11200,AT5G23430,AT1G15060,AT1G53930,AT1G63050,AT3G01060,AT1G03210,AT2G05710,AT4G34430,AT3G32190,AT1G30090,AT3G04280,AT5G38550,AT5G17650,AT1G10200,AT3G61850,AT3G58220,AT1G79010,AT2G39940,AT2G14520,AT3G43410,AT3G54750,AT1G54680,AT5G54430,AT1G51480,AT1G15290,AT5G41700,AT1G14850,AT2G30930,AT1G18620,AT4G36040,AT1G15440,AT1G01420,AT1G03030,AT1G11100,AT2G24810,AT3G09360,AT1G14030,AT1G32190,AT5G48605,AT5G36690,AT5G04250,AT2G21610,AT3G01790,AT3G26750,AT5G16990,AT1G76405,AT1G33410,AT5G54480,AT1G16290,AT1G48600,AT1G44900,AT5G38460,AT5G01960,AT5G41640,AT3G09050,AT1G78200,AT3G20820,AT4G29070,AT4G16580,AT5G65530,AT3G51280,AT5G47420,AT3G28820,AT5G51550,AT5G47650,AT4G11410,AT5G09510,AT2G27360,AT3G03750,AT1G64930,AT5G67000,AT5G23310,AT5G39820,AT1G23410,AT3G43790,AT1G50500,AT3G02140,AT4G37500,AT5G01770,AT3G03030,AT4G21340,AT3G55590,AT1G53850,AT3G25020,OBSOLETE,AT2G25090,AT3G53010,AT3G23610,AT1G67270,AT5G32590,AT3G09070,AT3G23220,AT2G37360,AT5G11800,AT5G02640,AT4G14250,AT5G39800,AT5G13700,AT4G24670,AT2G47750,AT4G38460,AT2G35390,AT1G55450,AT1G52390,AT3G52220,AT2G10450,AT3G03430,AT5G38170,AT5G45570,AT2G30010,AT5G46750,AT4G19080,AT1G13150,AT3G07130,AT5G02740,AT1G19490,AT4G24540,AT1G01640,AT5G50330,AT5G10320,AT3G13530,AT1G10020,AT1G14205,AT2G06530,AT5G01970,AT4G25340,AT2G03240,AT1G79440,AT5G41290,AT3G28520,AT3G53500,AT3G61010,AT2G27810,AT3G46530,AT3G05310,AT5G09290,AT1G34490,AT2G32660,AT2G16040,AT3G24010,AT3G19510,AT5G16410,AT3G61550,AT5G53020,AT1G79050,AT5G23950,AT2G34470,AT5G25910,AT3G52920,AT4G27670,AT1G04200,AT4G30320,AT5G42320,AT2G43870,AT3G47730,AT1G64330,AT5G42020,AT5G55630,AT1G55350,AT1G68330,AT5G05100,AT5G54710,AT3G48560,AT2G33040,AT2G14600,AT2G27320,AT1G70550,AT2G04700,AT5G56380,AT3G47180,AT5G14800,AT3G03060,AT2G29420,AT1G76370,AT2G32010,AT2G04430,AT3G57785,AT5G16300,AT2G40060,AT5G65050,AT3G26060,AT2G30630,AT3G19550,AT3G14510,AT5G53780,AT2G28100,AT5G04920,AT5G42825,AT2G04350,AT5G02430,AT5G37060,AT4G12220,AT2G15530,AT2G25270,AT1G08410,AT5G43310,AT1G64180,AT2G32000,AT5G01110,AT3G49990,AT1G74180,AT2G43340,AT5G11890,AT2G31260,AT1G10600,AT4G18760,AT1G69480,AT1G63140,AT3G16570,AT2G31680,AT4G26580,AT1G60740,AT1G77550,AT5G10820,AT5G13470,AT4G26970,AT4G04820,AT1G16470,AT3G19470,AT5G51830,AT4G10520,AT3G62770,AT3G02840,AT2G21150,AT5G37950,AT2G44180,AT4G01460,AT4G00070,AT3G59300,AT3G24517,AT3G05940,AT1G29110,AT5G19450,AT5G11710,AT2G18140,AT3G10970,AT4G23882,AT2G29360,AT4G25560,AT3G10850,AT3G43990,AT5G39550,AT5G16640,AT1G78960,AT1G58080,AT5G45470,AT5G59420,AT5G06540,AT1G03170,AT5G27540,AT1G49970,AT1G19720,AT2G46140,AT1G55360,AT5G24120,AT4G17780,AT5G51650,AT1G65120,AT2G15220,AT1G29240,AT2G43740,AT2G34620,AT1G71820,AT5G52720,AT2G02340,AT1G05150,AT1G29490,AT1G78680,AT5G63590,AT3G11020,AT5G16590,AT2G32150,AT1G57906,AT3G17440,AT5G58410,AT2G42090,AT5G63170,AT1G11000,AT3G15780,AT2G35020,AT1G73510,AT5G65010,AT2G36010,AT5G56510,AT4G21080,AT3G42200,AT2G28370,AT1G51470,AT1G05100,AT1G13300,AT2G29530,AT4G37010,AT5G40260,AT5G56730,AT5G36100,AT2G30820,AT3G02990,AT5G17570,AT5G04440,AT2G36530,AT5G40405,AT1G52700,AT2G43080,AT1G72450,AT5G05830,AT3G56650,AT5G07390,AT3G43670,AT2G11360,AT2G37340,AT1G32290,AT3G24330,AT1G68460,AT3G56860,AT4G36380,AT4G21610,AT1G13790,AT1G51730,AT1G09980,AT1G50710,AT1G70520,AT1G19690,AT1G34510,AT5G50370,AT3G44670,AT5G24030,AT1G04640,AT2G39110,AT2G30360,AT4G04040,AT5G49740,AT5G24735,AT2G35730,AT5G44990,AT3G13120,AT3G16390,AT2G04520,AT1G02410,AT5G15270,AT1G15400,AT1G04180,AT1G12970,AT1G43090,AT2G42110,AT2G18480,AT5G45880,AT3G61710,AT3G15630,AT1G68150,AT5G66000,AT2G36790,AT5G09240,AT1G31540,AT2G03010,AT3G08620,AT5G52100,AT1G06160,AT3G46350,AT1G57980,AT3G54190,AT2G03090,AT5G45100,AT3G15060,AT5G58610,AT2G16370,AT3G09750,AT5G19960,AT2G37960,AT5G56860,AT5G23320,AT2G16890,AT3G61130,AT5G04680,AT2G17110,AT4G31520,AT2G24340,AT1G64190,AT5G52810,AT3G54870,AT1G28060,AT5G52760,AT4G08760,AT4G14040,AT3G20140,AT1G31220,AT1G56430,AT3G17540,AT5G23830,AT4G01800,AT1G19600,AT1G67840,AT5G38320,AT5G01330,AT1G75140,AT3G12960,AT5G60540,AT1G28540,AT1G27270,AT1G10320,AT2G27580,AT1G69470,AT4G27010,AT2G03760,AT3G49670,AT2G34030,AT2G40320,AT5G60340,AT2G03030,AT2G36700,AT2G28990,AT3G62790,AT4G27250,AT5G10220,AT2G15560,AT3G14140,AT1G43000,AT3G47840,AT3G10550,AT3G06360,AT2G21660,AT5G15730,AT1G74190,AT5G11960,AT1G53550,AT3G54800,AT2G18440,AT5G05570,AT3G30190,AT3G16730,AT4G29350,AT1G54040,AT1G17970,AT5G39250,AT3G47800,AT3G61650,AT1G31280,AT1G05280,AT2G27950,AT1G09650,AT1G16500,AT3G24360,AT5G06940,AT3G54820,AT4G23110,AT1G36940,AT2G21680,AT5G59200,AT3G12270,AT5G14610,AT1G20760,AT3G24040,AT4G18850,AT5G24440,AT5G35475,AT2G12100,AT5G05180,AT4G28330,AT1G15860,AT4G20830,AT2G44530,AT1G22800,AT1G28130,AT1G50780,AT2G02870,AT4G08460,AT5G09340,AT2G44950,AT2G26970,AT5G18475,AT3G30560,AT3G25570,AT1G31260,AT3G62450,AT5G42590,AT4G22430,AT2G16910,AT3G14870,AT5G59680,AT3G32030,AT3G45580,AT2G45950,AT2G41370,AT2G47800,AT5G56460,AT1G33990,AT5G58330,AT3G63460,AT5G42905,AT5G58280,AT5G21920,AT4G17950,AT2G28320,AT1G10590,AT4G33870,AT4G36870,AT5G14650,AT5G37280,AT5G43360,AT4G28060,AT3G21990,AT5G51500,AT1G48750,AT5G07410,AT5G55940,AT1G66060,AT5G17610,AT1G76100,AT1G12170,AT2G25370,AT1G55690,AT1G10580,AT1G15630,AT2G21910,AT1G58360,AT5G07870,AT5G14290,AT2G15640,AT5G19570,AT1G17640,AT1G12770,AT3G21850,AT5G57030,AT1G17540,AT2G45730,AT3G51650,AT3G27990,AT4G13300,AT2G45460,AT2G44890,AT5G43530,AT3G55770,AT3G21960,AT1G69900,AT2G17500,AT3G46600,AT3G59910,AT2G20320,AT1G69670,AT3G16280,AT5G47960,AT3G20950,AT2G31110,AT5G48330,AT5G37370,AT1G53290,AT1G53490,AT2G20970,AT2G05370,AT2G40000,AT4G02090,AT3G54660,AT1G66970 GAETA_ALLOPOLYPLOID/PARENT-MIX1250_PERGENEVAR_DN Down-regulated genes that were nonadditively expressed in allopolyploid line 1200 relative to the 1:1 parent mix--parentmix_1250_FDR_PerGeneVar (Dataset S3 PubmedID:19274085) AT1G28230,AT4G21070,AT3G05980,AT2G05520,AT2G32090,AT4G23420,AT1G56170,AT3G58280,AT2G26480,AT5G36110,AT4G07690,AT1G09950,AT2G14450,AT3G14900,AT4G26870,AT4G31390,AT5G09330,AT5G49100,AT3G54070,AT4G27510,AT2G17070,AT3G24110,AT3G20440,AT2G25730,AT3G57220,AT5G61770,AT1G28450,AT1G28080,AT3G49050,AT4G03410,AT3G56430,AT3G27660,AT2G46270,AT5G63010,AT4G37480,AT3G56620,AT3G47870,AT2G25050,AT1G48060,AT5G08760,AT1G77850,AT5G37810,AT3G25780,AT3G05240,AT3G04910,AT4G18070,AT5G53320,AT1G55380,AT3G23430,AT2G44710,AT1G69980,AT3G27690,AT3G14840,AT4G25434,AT2G01800,AT3G06540,AT3G27240,AT2G03070,AT1G10610,AT1G19940,AT2G24590,AT2G36020,AT3G43110,AT3G11520,AT3G11150,AT1G15080,AT1G18780,AT3G21210,AT5G06100,AT1G25450,AT1G19840,AT1G26250,AT4G03550,AT1G69650,AT3G16670,AT5G50040,AT4G31750,AT2G04210,AT5G19130,AT1G52620,AT2G20960,AT5G20920,AT4G39440,AT2G31710,AT5G52220,AT3G21360,AT4G27980,AT2G22660,AT3G44710,AT1G08280,AT5G57655,AT2G01660,AT5G02110,AT1G32660,AT3G02520,AT3G62600,AT5G45260,AT4G11330,AT5G43680,AT5G42610,AT1G48440,AT4G27170,AT4G10400,AT5G53590,AT5G13690,AT4G39050,AT5G54830,AT2G35580,AT3G05310,AT5G23960,AT5G27100,AT1G01980,AT3G48920,AT1G76140,AT1G35515,AT5G54840,AT5G45330,OBSOLETE,AT4G36900,AT3G06290,AT3G01430,AT1G07745,AT3G55150,AT1G63670,AT3G42080,AT5G06520,AT3G22870,AT5G62310,AT1G80300,AT1G76930,AT3G17440,AT3G17450,AT5G14080,AT4G04740,AT5G64180,AT4G18430,AT3G57800,AT1G04000,AT5G49910,AT4G31230,AT1G01470,AT5G43910,AT5G11640,AT4G38420,AT3G62360,AT2G31320,AT1G61870,AT1G30210,AT5G02670,AT5G13570,AT2G04235,AT3G46490,AT2G33870,AT3G06000,AT1G21190,AT5G54410,AT3G58850,AT2G45630,AT1G54030,AT3G02620,AT3G19570,AT2G01480,AT1G79280,AT3G59100,AT3G01090,AT3G52170,AT4G33740,AT5G27230,AT5G13590,AT3G52330,AT1G31490,AT3G11080,AT5G17290,AT3G02440,AT1G27620,AT4G19710,AT4G23730,AT5G48200,AT1G02150,AT3G10360,AT4G13110,AT3G30530,AT4G02450,AT4G32610,AT2G39080,AT1G01960,AT1G63130,AT1G64640,AT1G22860,AT2G25510,AT4G13570,AT3G23580,AT5G35030,AT3G21260,AT4G19130,AT2G48110,AT5G27600,AT1G75910,AT3G16110,AT5G61030,AT3G16340,AT1G16080,AT4G33450,AT3G60470,AT5G33393,AT5G24690,AT5G62860,AT4G00335,AT1G78620,AT1G01840,AT5G24930,AT3G07260,AT3G44770,AT3G61590,AT4G24220,AT4G16890,AT1G12580,AT1G79960,AT1G07340,AT2G30240,AT1G55120,AT1G66370,AT5G58350,AT1G22110,AT4G31560,AT5G61720,AT3G24160,AT3G48930,AT5G52130,AT1G23000,AT3G42320,AT3G14090,AT3G53780,AT1G51630,AT1G67880,AT4G32300,AT5G18900,AT1G31810,AT4G36600,AT3G42400,AT1G05890,AT5G13380,AT5G66450,AT2G38410,AT3G14760,AT1G18970,AT4G08630,AT2G46870,AT1G02020,AT4G31530,AT2G39550,AT3G56980,AT4G16770,AT1G13270,AT3G15355,AT5G04040,AT4G23200,AT5G47780,AT5G15990,AT2G25780,AT2G14820,AT4G35580,AT3G13650,AT4G33600,AT4G30110,AT1G43700,AT2G40290,AT2G45580,AT3G24890,AT1G16670,AT2G46970,AT4G25330,AT3G17230,AT4G39040,AT3G26980,AT5G53300,AT1G62060,AT3G22550,AT3G01480,AT4G04630,AT2G17480,AT3G10090,AT4G09840,AT2G21750,AT3G07410,AT1G77520,AT3G52072,AT1G27670,AT1G74190,AT1G12890,AT1G03120,AT3G57480,AT4G36000,AT4G18180,AT5G35100,AT5G11360,AT5G50510,AT5G66190,AT3G53170,AT1G23790,AT1G27540,AT1G74290,AT3G57330,AT2G24580,AT1G64450,AT5G03555,AT5G37610,AT4G39370,AT1G13990,AT5G09850,AT5G61250,AT3G10400,AT3G56680,AT5G16150,AT1G51550,AT4G28703,AT1G63830,AT2G39050,AT5G06140,AT3G12570,AT3G58120,AT1G64110,AT4G09300,AT5G47550,AT5G17010,AT3G51090,AT2G36760,AT5G35510,AT4G07500,AT2G16980,AT5G17710,AT3G13450,AT2G34500,AT5G52350,AT4G39600,AT1G01810,AT4G27750,AT5G53190,AT1G79510,AT4G34350,AT3G23510,AT4G32870,AT4G00960,AT3G26320,AT2G41850,AT2G46280,AT1G03090,AT1G76010,AT5G51250,AT3G55710,AT4G07990,AT3G22050,AT1G56050,AT1G23950,AT2G36800,AT4G18300,AT5G34940,AT5G20420,AT1G26910,AT5G45930,AT1G25230,AT1G45050,AT3G19800,AT5G59750,AT4G24950,AT4G12580,AT3G14060,AT3G45080,AT4G08770,AT3G44630,AT1G53520,AT1G61810,AT4G34920,AT3G13890,AT4G28050,AT5G12170,AT5G37120,AT3G46330,AT4G33000,AT5G36035,AT3G51750,AT3G48180,AT5G06740,AT5G08560,AT4G36890,AT5G35400,AT1G65260,AT1G51490,AT3G05960,AT3G48630,AT2G18640,AT2G28150,AT1G33500,AT3G47610,AT1G33540,AT2G47060,AT3G14650,AT3G51460,AT2G28010,AT4G39890,AT1G74790,AT3G10780,AT5G53670,AT4G30830,AT4G17810,AT3G16450,AT2G04790,AT2G19980,AT2G18710,AT1G30950,AT3G06130,AT2G07770,AT4G05540,AT2G27630,AT2G17620,AT4G01840,AT5G44220,AT5G48670,AT5G57010,AT2G37230,AT1G36280,AT4G13040,AT3G41979,AT1G71695,AT2G17750,AT4G35920 GAETA_ALLOPOLYPLOID/PARENT-MIX1250_COMMONVAR_UP Up-regulated genes that were nonadditively expressed in allopolyploid line 1200 relative to the 1:1 parent mix--parentmix_1250_FDR_CommonVar (Dataset S3 PubmedID:19274085) AT1G15030,AT3G51360,AT5G09910,AT2G10350,AT1G74650,AT5G11030,AT3G20330,AT2G32710,AT4G14890,AT4G16540,AT3G10810,AT1G20440,AT3G04740,AT2G28060,AT5G55270,AT5G52410,AT1G22990,AT1G10030,AT3G11780,AT2G26150,AT3G56660,AT4G10190,AT1G15180,AT2G26590,AT4G26750,AT4G08380,AT4G37620,AT3G27850,AT2G34910,AT1G79430,AT5G37100,AT5G61440,AT1G30490,AT3G42240,AT5G67090,AT4G25690,AT1G22260,AT4G05460,AT5G56630,AT1G77980,AT4G24090,AT4G24860,AT1G05550,AT5G38440,AT3G52290,AT3G04680,AT5G03495,AT1G33480,AT4G30430,AT2G20050,AT3G26932,AT4G10880,AT1G79160,AT1G56550,AT5G63490,AT1G28660,AT4G02720,AT5G10990,AT3G17520,AT5G59150,AT4G09040,AT1G63210,AT3G02080,AT2G01050,AT4G15650,AT3G09520,AT2G20780,AT4G25810,AT5G04120,AT3G03020,AT2G10370,AT1G72470,AT4G02480,AT1G09160,AT1G13090,AT4G08300,AT5G09430,AT4G27810,AT3G26360,AT1G68400,AT5G35900,AT5G48510,AT2G41770,AT1G42190,AT1G26350,AT5G54260,AT4G36860,AT3G26090,AT4G31120,AT5G15710,AT3G47360,AT4G15830,AT5G53040,AT5G36080,AT1G72550,AT4G32830,AT4G13460,AT5G53990,AT3G42120,AT5G63840,AT4G28300,AT1G62930,AT3G01950,AT3G01960,AT5G43760,AT3G08860,AT4G30680,AT1G79950,AT5G64770,AT1G20540,AT3G47820,AT3G17750,AT1G54780,AT1G09470,AT3G49550,AT1G71680,AT5G46340,AT4G33710,AT1G75630,AT3G24050,AT2G18350,AT5G22410,AT5G38710,AT2G36680,AT3G25150,AT1G47610,AT1G50690,AT3G53230,AT5G63230,AT4G19220,AT1G50620,AT1G52720,AT3G27480,AT4G16190,AT1G62800,AT4G19110,AT5G01210,AT3G05250,AT3G48780,AT2G23030,AT4G19590,AT1G14880,OBSOLETE,AT1G42630,AT4G03500,AT2G45650,AT4G16340,AT1G60800,AT5G44150,AT3G04530,AT4G35890,AT3G43880,AT5G24640,AT1G60940,AT2G26510,AT3G16550,AT3G26420,AT2G04410,AT4G14520,AT3G49560,AT3G13380,AT3G28415,AT1G66220,AT4G00580,AT4G09070,AT3G02000,AT3G25700,AT3G07060,AT1G52280,AT1G53000,AT3G43440,AT1G49015,AT3G54920,AT1G70780,AT5G23730,AT5G45910,AT4G35250,AT4G11510,AT3G50920,AT1G20950,AT5G44730,AT3G29830,AT5G64360,AT5G55910,AT5G67190,AT1G21830,AT4G16940,AT5G63740,AT5G51170,AT2G21440,AT2G45310,AT4G12870,AT3G29800,AT3G09600,AT3G12630,AT3G29580,AT1G50580,AT2G33845,AT5G26810,AT1G14660,AT4G30100,AT2G28450,AT1G48090,AT2G24930,AT3G04180,AT5G46950,AT3G04430,AT5G20960,AT5G51380,AT4G15460,AT4G00020,AT1G35530,AT5G34960,AT3G05650,AT2G11090,AT1G24460,AT3G45860,AT4G29760,AT5G51620,AT4G25310,AT3G17220,AT1G53470,AT3G49510,AT5G54280,AT5G32621,AT4G02940,AT4G21570,AT5G10710,AT4G11250,AT5G53330,AT3G05490,AT4G14230,AT5G58850,AT5G66610,AT5G65780,AT5G44060,AT2G42760,AT5G17470,AT5G48940,AT1G76380,AT3G44450,AT1G06210,AT3G61580,AT4G15910,AT4G34180,AT3G59200,AT2G24230,AT4G29710,AT1G77870,AT4G01895,AT1G01280,AT1G02970,AT3G62230,AT3G62250,AT5G15070,AT5G24310,AT2G20420,AT3G48330,AT5G02150,AT2G27510,AT5G05720,AT2G10440,AT4G32050,AT5G42210,AT3G24500,AT2G20160,AT1G06110,AT4G40100,AT5G38895,AT4G36170,AT3G02920,AT3G52810,AT5G07660,AT1G29510,AT3G62040,AT4G13650,AT2G38255,AT3G14880,AT4G01850,AT2G41080,AT1G70720,AT3G60440,AT4G17870,AT5G52430,AT4G36440,AT2G37690,AT5G42590,AT2G03420,AT3G05390,AT3G01030,AT5G38610,AT1G10095,AT4G13190,AT4G11880,AT1G56160,AT3G18830,AT2G45300,AT1G12480,AT3G14950,AT5G49970,AT2G43200,AT5G26130,AT5G38680,AT2G25810,AT5G26960,AT4G30730,AT1G50450,AT4G33790,AT1G21410,AT5G02870,AT5G57220,AT3G07420,AT3G22440,AT5G45670,AT2G17300,AT5G03240,AT5G50820,AT5G43300,AT2G33020,AT3G12620,AT1G17720,AT3G23190,AT1G53690,AT2G37890,AT4G00460,AT1G03730,AT4G26160,AT4G13820,AT2G46400,AT1G11630,AT1G66470,AT1G21350,AT5G14220,AT5G22370,AT2G30060,AT5G13840,AT5G17900,AT1G56540,AT1G69170,AT5G66130,AT1G02430,AT4G21450,AT3G30247,AT1G69640,AT3G50860,AT1G56240,AT4G25730,AT1G64430,AT5G57120,AT3G26520,AT2G33700,AT4G24150,AT2G33255,AT1G69400,AT5G40100,AT5G65730,AT5G62070,AT3G27590,AT1G43850,AT1G69720,AT5G13620,AT3G28240,AT2G22920,AT5G45340,AT1G21770,AT4G00140,AT5G01200,AT1G21140,AT1G70450,AT5G37340,AT4G39610,AT3G47910,AT2G16010,AT2G47470,AT1G35930,AT3G03000,AT1G28310,AT1G70730,AT5G67250,AT1G66850,AT1G28530,AT4G11400,AT1G71280,AT1G66350,AT1G16490,AT1G78120,AT1G77110,AT1G56510,AT2G05360,AT4G00755,AT1G63730,AT5G03480,AT1G60250,AT2G01710,AT1G61490,AT5G25780,AT1G09090,AT1G13600,AT3G43950,AT2G15830,AT2G01950,AT1G55250,AT1G52200,AT4G20100,AT4G05170 GAETA_ALLOPOLYPLOID/PARENT-MIX1250_COMMONVAR_DN Down-regulated genes that were nonadditively expressed in allopolyploid line 1200 relative to the 1:1 parent mix--parentmix_1250_FDR_CommonVar (Dataset S3 PubmedID:19274085) AT5G05930,AT4G23380,AT3G60250,AT4G22950,AT3G12440,AT4G31710,AT2G17900,AT4G19730,AT4G33030,AT1G66460,AT2G43530,AT5G04030,AT5G24750,AT5G22900,AT5G50210,AT5G22760,AT1G33800,AT1G44800,AT1G03430,AT2G05260,AT5G18630,AT3G43180,OBSOLETE,AT3G02590,AT4G16970,AT5G66630,AT1G29760,AT4G39420,AT1G78760,AT1G29400,AT5G35930,AT4G11230,AT2G22600,AT2G23096,AT1G50740,AT4G01840,AT3G28720,AT4G03950,AT1G62540,AT2G35160,AT3G22460,AT5G37890,AT5G07440,AT3G01670,AT1G63460,AT3G25500,AT1G02730,AT4G00360,AT2G23830,AT4G14560,AT5G44220,AT4G39530,AT3G19870,AT5G48670,AT3G01130,AT2G41720,AT2G42290,AT5G14100,AT2G03840,AT3G14430,AT3G13790,AT5G40430,AT2G38250,AT3G10280,AT5G13330,AT5G09900,AT2G25110,AT1G21430,AT1G19394,AT1G01490,AT3G06880,AT5G53920,AT5G33355,AT5G56550,AT2G41130,AT1G11905,AT3G16380,AT5G43100,AT2G15820,AT3G15690,AT2G32620,AT5G55220,AT1G77500,AT5G63500,AT2G45190,AT5G56710,AT3G09140,AT2G35300,AT5G38650,AT5G41810,AT4G34540,AT2G37980,AT4G36370,AT1G05840,AT3G45630,AT2G38270,AT5G63260,AT5G02780,AT2G40960,AT4G12030,AT3G14130,AT4G26740,AT4G29540,AT1G74000,AT5G24165,AT1G03060,AT2G01130,AT1G23540,AT5G16730,AT2G44850,AT3G26700,AT1G17810,AT5G22880,AT3G08960,AT4G39970,AT1G75540,AT1G60110,AT5G16920,AT3G55910,AT3G57210,AT1G29730,AT5G10110,AT3G43460,AT4G16050,AT1G65860,AT3G10350,AT2G12700,AT5G07490,AT5G57010,AT5G39410,AT1G54770,AT1G22460,AT1G14060,AT4G21760,AT1G65130,AT5G05660,AT5G09720,AT4G35910,AT2G01140,AT2G39030,AT5G02440,AT5G51950,AT2G05210,AT5G22290,AT4G00310,AT1G18960,AT5G08550,AT1G09700,AT3G21520,AT5G25120,AT2G16530,AT3G21370,AT4G02060,AT3G06820,AT5G54270,AT4G18830,AT3G19780,AT4G17670,AT4G39350,AT4G17480,AT5G41790,AT3G08500,AT1G60400,AT4G02400,AT3G42700,AT1G48070,AT3G50980,AT1G15330,AT2G02760,AT5G26820,AT2G22190,AT2G37230,AT5G66790,AT3G45160,AT5G54600,AT1G26570,AT3G03720,AT2G17790,AT4G12640,AT5G18040,AT1G21000,AT3G18740,AT1G36280,AT3G46940,AT4G03340,AT4G39370,AT1G04090,AT2G16990,AT4G34750,AT4G36220,AT1G08510,AT5G26200,AT4G17020,AT2G28810,AT2G37180,AT1G29430,AT1G26750,AT5G62510,AT5G49650,AT1G49980,AT4G38240,AT3G12470,AT5G58580,AT4G35270,AT1G14020,AT4G31800,AT3G21700,AT4G24240,AT2G25720,AT4G26320,AT1G80050,AT2G27140,AT3G54050,AT2G21960,AT5G17200,AT5G47120,AT2G33500,AT5G05350,AT1G04920,AT5G57850,AT3G15351,AT1G16170,AT1G53240,AT4G12800,AT1G75530,AT5G22180,AT3G45770,AT4G31830,AT2G42830,AT3G28270,AT3G47380,AT5G65420,AT2G39960,AT2G26880,AT1G14220,AT1G49890,AT1G73060,AT3G09690,AT3G55270,AT5G63800,AT4G17300,AT2G47940,AT5G28910,AT4G15510,AT3G54770,AT2G21270,AT5G59820,AT1G19110,AT5G59560,AT1G58330,AT1G47128,AT3G18800,AT1G48590,AT4G37630,AT3G09960,AT1G07400,AT1G27820,AT3G26390,AT5G03415,AT4G33170,AT1G27030,AT1G26520,AT5G35737,AT2G19910,AT4G02360,AT5G01770,AT3G57450,AT2G38580,AT1G71530,AT3G25660,AT3G42310,AT4G12390,AT5G05160,AT4G39140,AT4G39960,AT5G02820,AT5G35270,AT4G24610,AT2G29640,AT2G02470,AT2G29630,AT4G03000,AT4G18310,AT1G48530,AT2G38550,AT4G31310,AT1G61600,AT3G61830,AT5G60050,AT4G35390,AT4G07460,AT1G01820,AT3G16430,AT5G28410,AT2G32290,AT1G52140,AT5G66140,AT1G10110,AT4G36470,AT3G47833,AT3G48890,AT3G09490,AT1G67170,AT2G37640,AT4G14050,AT3G26670,AT1G27450,AT2G04440,AT4G22790,AT3G13080,AT4G29120,AT5G41750,AT4G05470,AT3G27060,AT1G04890,AT1G76470,AT5G62560,AT2G47700,AT2G16220,AT3G08510,AT4G13040,AT3G15240,AT1G61030,AT5G16390,AT3G59180,AT4G32930,AT4G23860,AT3G56230,AT5G58530,AT5G48080,AT5G38970,AT4G30980,AT4G22690,AT2G26600,AT1G21245,AT1G20450,AT2G43780,AT5G28850,AT1G19100,AT3G41979,AT5G56420,AT4G21326,AT5G57390,AT4G31570,AT3G23390,AT4G33970,AT4G37030,AT2G42040,AT4G34400,AT2G44800,AT2G05180,AT4G22570,AT3G07210,AT5G24880,AT1G74210,AT5G19610,AT5G42110,AT3G03330,AT2G28860,AT2G41520,AT1G27350,AT2G05850,AT1G65660,AT3G14280,AT1G17990,AT3G55650,AT2G45200,AT1G79630,AT4G34490,AT1G44542,AT3G54600,AT3G51500,AT5G15920,AT5G22690,AT3G45440,AT4G03420,AT2G17920,AT5G66850,AT4G07510,AT1G43620,AT4G21660,AT4G39860,AT1G29380,AT4G16900,AT2G47130,AT3G19840,AT4G15930,AT4G10760,AT5G22420,AT5G15790,AT3G53200,AT3G22900,AT2G42480,AT5G65950,AT4G21960,AT1G73930,AT1G71695,AT3G14690,AT5G50870,AT2G32240,AT2G11010,AT3G12100,AT5G64490,AT5G03620,AT1G06090,AT2G17750,AT2G33860,AT5G01420,AT2G24520,AT3G04470,AT4G25350,AT4G29490,AT1G09830,AT3G05030,AT3G01210,AT5G48380,AT5G57520,AT1G48420,AT4G18010,AT2G30220,AT5G45780,AT1G23700,AT2G23590,AT1G61550,AT5G03680,AT2G34250,AT5G04010,AT3G05800,AT4G38600,AT1G12490,AT4G37860,AT3G11260,AT5G51830,AT3G48550,AT3G25900,AT3G60920,AT4G35920,AT5G16620,AT3G06500,AT4G05060,AT5G43650,AT3G51510,AT5G63180,AT5G05460,AT3G14170,AT3G28650,AT4G00850,AT1G42550 GAETA_ALLOPOLYPLOID/PARENT-MIX5200_COMMONVAR_UP Up-regulated genes that were nonadditively expressed in allopolyploid line 1200 relative to the 1:1 parent mix--parentmix_5200_FDR_CommonVar (Dataset S4 PubmedID:19274085) AT4G19720,AT2G05310,AT5G48385,AT2G02050,AT3G51360,AT2G10350,AT5G44530,AT1G47730,AT4G22570,AT5G02150,AT1G08970,AT1G47230,AT4G21450,AT5G11250,AT3G22421,AT1G34780,AT5G48940,AT4G09040,AT3G52810,AT5G13340,AT3G18170,AT5G07800,AT5G09910,AT2G45610,AT3G25855,AT5G49880,AT5G42800,AT5G53270,AT1G37020,AT1G09070,AT5G09690,AT5G10330,AT4G12640,AT1G09530,AT1G50690,AT5G02810,AT1G72690,AT3G28345,AT3G28890,AT1G65480,AT5G61440,AT3G02070,AT3G13730,AT1G67580,AT3G22490,AT3G18280,AT1G59870,AT5G38710,AT5G39865,AT2G45300,AT3G15600,AT4G25980,AT2G06960,AT4G15530,AT1G21750,AT1G20520,AT3G09700,AT1G61550,AT1G75530,AT1G30450,AT3G62940,AT4G33690,AT1G17370,AT2G18400,AT5G34855,AT1G18300,AT1G03730,AT1G73060,AT1G75630,AT3G03340,AT3G07060,AT2G37530,AT3G59850,AT2G23540,AT3G30580,AT1G43040,AT5G66100,AT1G12600,AT2G39810,AT1G68120,AT1G52820,AT3G43710,AT5G03480,AT3G44910,AT4G05170,AT4G16540,AT4G26300,AT4G28910,AT2G18750,AT1G07310,AT3G21400,AT2G33540,AT1G19090,AT1G63290,AT3G17030,AT1G55930,AT4G13850,AT3G56420,AT1G61150,AT5G16820,AT3G58540,AT2G42360,AT3G42640,AT5G41280,AT2G43330,AT5G22640,AT5G21020,AT1G72470,AT3G17000,AT3G26390,AT3G27590,AT1G07790,AT3G60720,AT2G38840,AT1G64990,AT2G28540,AT2G32487,AT2G14860,AT4G10880,AT2G41310,AT2G01630,AT4G24130,AT2G06000,AT4G11210,AT2G29190,AT3G63120,AT1G24050,AT1G10030,AT1G71090,AT1G03430,AT1G19640,AT1G54080,AT3G19790,AT4G32460,AT5G47180,AT3G61800,AT1G75090,AT5G57390,AT3G55040,AT1G17990,AT2G26530,AT1G71530,AT1G15330,AT4G28350,AT4G19480,AT3G61570,AT4G38480,AT3G23700,AT1G04590,AT5G53180,AT1G55390,AT5G63690,AT1G66860,AT5G51110,AT2G41380,AT5G02110,AT5G63620,AT5G06805,AT4G15230,AT4G23380,AT3G01790,AT1G27380,AT1G80840,AT4G28250,AT1G24120,AT2G02770,AT1G62800,AT4G24960,AT1G23190,AT3G05870,AT2G46980,AT1G20410,AT5G44150,AT4G23720,AT3G18830,AT1G33800,AT5G43570,AT4G32960,AT1G55420,AT5G25270,AT3G04000,AT1G50650,AT2G42370,AT1G23680,AT3G45860,AT1G10360,AT5G22590,AT3G47360,AT1G74510,AT1G26950,AT5G61730,AT3G01810,AT4G35120,AT1G33750,AT2G07020,AT1G10230,AT5G59150,AT4G13340,AT2G05440,AT1G69020,AT2G38960,AT2G44640,AT2G10440,AT5G04480,AT4G39610,AT3G20590,AT3G13550,AT3G26410,AT5G40030,AT2G18220,AT3G61700,AT1G51690,AT3G02550,AT3G51620,AT4G17160,AT3G57380,AT1G44090,AT2G02100,AT1G33615,AT1G65540,AT1G68130,AT2G36960,AT2G32590,AT3G03840,AT4G25730,AT1G60190,AT5G10420,AT5G67240,AT2G04900,AT5G11150,AT5G17080,ATCG01020,AT4G15610,AT3G01030,AT3G21630,AT1G78500,AT4G15720,AT3G01360,AT1G21000,AT5G63740,AT1G13340,AT4G13980,AT2G18850,AT5G38610,AT1G21450,AT3G18760,AT1G27390,AT5G57040,AT4G27880,AT5G51710,AT3G44090,AT5G63980,AT1G54780,AT3G14880,AT1G52080,AT3G28415,AT1G42560,AT1G63730,AT1G35320,AT5G05740,AT3G57780,AT4G24090,AT5G10830,AT3G56510,AT5G23290,AT5G46740,AT3G44870,AT5G52010,AT1G21810,AT4G18310,AT3G04700,AT3G18950,AT3G45770,AT5G24950,AT5G16486,AT1G74860,AT1G65170,AT5G38900,AT2G38920,AT5G49280,AT2G18390,AT2G04410,AT5G41040,AT1G55070,AT5G46360,AT2G33210,AT4G21990,AT4G09140,AT3G01200,AT5G56030,AT5G17480,AT4G01520,AT3G63250,AT1G21850,AT5G13840,AT1G71015,AT4G30660,AT1G47960,AT4G24390,AT4G09450,AT4G29970,AT1G32270,AT1G52280,AT4G03170,AT2G19730,AT4G15040,AT3G26932,AT2G31570,AT1G19540,AT4G12360,AT3G49055,AT5G04740,AT3G03440,AT2G34010,AT4G30280,AT4G37560,AT3G52580,AT3G22650,AT3G25180,AT1G63570,AT4G12300,AT1G16430,AT4G05460,AT1G57630,AT5G07720,AT1G09155,AT1G73820,AT4G00720,AT1G57570,AT5G35900,AT2G36250,AT3G09900,AT4G19110,AT4G18610,AT4G18540,AT3G02010,AT1G69400,AT1G50640,AT1G70450,AT5G13610,AT4G07740,AT3G43630,AT3G06720,AT3G26520,AT4G19920,AT1G66460,AT4G32140,AT5G11270,AT2G26950,AT3G56530,AT5G20910,AT1G61420,AT4G23320,AT3G16780,AT2G32410,AT4G04370,AT1G64380,AT1G75790,AT2G45860,AT3G28900,AT1G09940,AT1G49660,AT1G30420,AT2G02700,AT1G66850,AT1G78150,AT5G48080,AT4G28940,AT3G44540,AT1G49015,AT3G05800,AT3G54530,AT1G65360,AT5G62623,AT1G71270,AT1G68725,AT4G37050,AT3G55380,AT2G42790,AT1G24570,AT4G23010,AT4G23550,AT4G16720,AT1G52520,AT2G40370,AT5G25060,AT3G52880,AT3G05670,AT1G48800,AT1G17510,AT3G60920,AT4G12280,AT3G26200,AT1G77500,AT5G63230,AT5G58570,AT3G09520,AT4G14380,AT5G24480,AT1G28140,AT2G13150,AT1G02780,AT4G26190,AT1G17750,AT2G07320,AT4G22520,AT5G10550,AT3G55910,AT5G07340,AT5G11080,AT1G29440,AT4G31920,AT5G61780,AT3G19280,AT3G53990,AT5G67420,AT3G27520,AT1G70360,AT2G15760,AT5G61900,AT5G63560,AT2G29980,AT4G13190,AT5G23575,AT4G24930,AT3G50860,AT3G02800,AT1G09550,AT1G63210,AT5G50790,AT5G26300,AT1G60110,AT4G04090,AT5G05340 GAETA_ALLOPOLYPLOID/PARENT-MIX5200_COMMONVAR_DN Down-regulated genes that were nonadditively expressed in allopolyploid line 1200 relative to the 1:1 parent mix--parentmix_5200_FDR_CommonVar (Dataset S4 PubmedID:19274085) AT1G15920,AT3G60240,AT5G19370,AT5G37350,AT3G02230,AT1G30190,AT5G36228,AT2G32600,AT1G58280,AT4G21980,AT3G48500,AT1G02870,AT3G57230,AT5G47990,AT3G20970,AT5G13520,AT5G46140,AT3G25590,AT4G39350,AT1G22660,AT1G08070,AT5G48710,AT3G12430,AT3G63440,AT1G17400,AT1G53580,AT1G60940,AT1G51390,AT5G53760,OBSOLETE,AT1G78070,AT4G10640,AT4G39960,AT2G37230,AT1G34560,AT3G47380,AT5G63100,AT5G45220,AT1G23320,AT4G13860,AT3G60920,AT4G34740,AT2G03230,AT4G02030,AT1G53900,AT2G18170,AT5G52020,AT3G26920,AT2G37260,AT5G38580,AT1G35310,AT3G07510,AT3G15980,AT1G20930,AT4G29070,AT1G80540,AT4G26000,AT4G27745,AT5G49130,AT4G01980,AT1G02850,AT3G01610,AT3G44760,AT1G15960,AT4G36860,AT4G25350,AT5G42290,AT3G50370,AT2G26550,AT5G26810,AT1G65470,AT3G62850,AT2G19180,AT1G49900,AT3G48550,AT2G20390,AT1G48070,AT5G51560,AT4G26840,AT3G62230,AT3G15290,AT1G12200,AT3G26710,AT5G45780,AT4G12310,AT3G14650,AT5G18040,AT3G17730,AT3G25585,AT2G21170,AT5G11160,AT4G22120,AT3G47833,AT3G45730,AT5G45590,AT1G11630,AT4G13350,AT2G34880,AT5G23160,AT2G21280,AT3G01400,AT4G27180,AT4G03200,AT1G16710,AT5G13330,AT1G74040,AT1G73240,AT1G12940,AT3G16450,AT3G45200,AT3G52030,AT2G26190,AT1G52140,AT4G20110,AT3G05030,AT3G57250,AT4G15790,AT4G16090,AT3G52290,AT5G04940,AT1G22882,AT1G24330,AT3G58610,AT5G35320,AT4G26790,AT4G37250,AT1G64370,AT4G16900,AT2G41000,AT2G25100,AT5G13600,AT1G55940,AT1G06110,AT4G21900,AT5G01670,AT2G32640,AT5G43200,AT2G35230,AT5G64130,AT1G44020,AT3G49570,AT5G57150,AT1G42960,AT5G36260,AT2G17510,AT3G53680,AT4G04955,AT1G52695,AT3G17840,AT5G47660,AT4G21920,AT5G50700,AT5G44970,AT2G47040,AT1G52990,AT3G18330,AT5G02310,AT1G68250,AT4G11450,AT5G60230,AT5G43280,AT4G08350,AT3G60890,AT3G58860,AT3G21250,AT3G01260,AT2G16380,AT3G53830,AT2G26910,AT3G48000,AT2G30960,AT5G51780,AT3G05165,AT4G21100,AT3G56470,AT1G74790,AT1G18960,AT4G36648,AT2G18930,AT1G53670,AT5G12340,AT4G39690,AT3G18820,AT2G22800,AT3G61830,AT5G62640,AT1G55840,AT1G71150,AT3G42700,AT5G38140,AT5G22410,AT3G04320,AT3G51460,AT1G49730,AT1G14370,AT2G28810,AT3G07020,AT2G27350,AT1G54770,AT3G24100,AT5G11290,AT3G02240,AT4G34930,AT3G42560,AT2G22670,AT5G06510,AT1G22460,AT1G33170,AT1G14080,AT3G31350,AT5G65620,AT2G35850,AT2G41460,AT2G31650,AT1G29430,AT1G58460,AT5G48020,AT3G19340,AT3G31330,AT5G63180,AT3G30260,AT1G53940,AT3G13610,AT1G48590,AT1G71730,AT5G13230,AT2G45530,AT1G13140,AT3G42254,AT3G22440,AT2G06510,AT4G11230,AT2G25120,AT1G29640,AT1G36050,AT2G16990,AT1G28220,AT5G14760,AT5G04030,AT1G56290,AT4G14140,AT4G09510,AT2G32200,AT4G15770,AT4G08920,AT4G22670,AT2G03450,AT5G41750,AT3G18360,AT3G29410,AT3G47590,AT3G60390,AT2G27630,AT4G22650,AT2G18800,AT1G07000,AT5G03630,AT5G45440,AT2G33000,AT5G10990,AT1G79280,AT3G01130,AT5G48030,AT1G08510,AT2G32240,AT4G15955,AT2G16470,AT5G02990,AT1G26670,AT2G37040,AT5G39950,AT4G32570,AT5G59830,AT1G52530,AT1G50400,AT1G29380,AT3G51740,AT4G16380,AT4G32640,AT3G58250,AT3G06680,AT1G74890,AT5G63500,AT5G57730,AT4G39530,AT3G21600,AT1G12570,AT3G05250,AT3G09130,AT2G05850,AT5G10930,AT2G41970,AT2G46020,AT3G26090,AT4G15510,AT1G29860,AT4G33510,AT3G20380,AT2G38350,AT2G44800,AT4G36440,AT2G42840,AT3G16030,AT2G41950,AT3G06670,AT3G48630,AT4G09030,AT1G04120,AT5G55360,AT4G35990,AT3G22900,AT1G21780,AT2G37990,AT1G23760,AT5G55930,AT3G28840,AT5G27080,AT4G17480,AT1G07650,AT5G05320,AT4G16100,AT5G53980,AT4G28360,AT2G03530,AT3G47440,AT3G62460,AT3G05750,AT5G04910,AT2G01210,AT3G51100,AT1G69450,AT1G76880,AT4G19270,AT5G02290,AT1G04700,AT2G02950,AT3G22920,AT4G31830,AT1G09450,AT3G07210,AT1G66930,AT1G54010,AT2G35470,AT2G21960,AT5G50870,AT4G14850,AT4G33230,AT3G56800,AT4G11360,AT5G01630,AT3G19840,AT5G09670,AT4G35540,AT1G12725,AT5G08380,AT3G54770,AT3G17720,AT5G07970,AT1G56520,AT4G19370,AT4G14385,AT5G27410,AT5G13190,AT3G24506,AT4G27240,AT2G44850,AT4G17370,AT1G02930,AT5G24500,AT2G16340,AT5G20630,AT3G14690,AT5G15920,AT1G30080,AT5G60590,AT5G66790,AT3G28650,AT4G35350,AT2G20900,AT5G58860,AT4G10730,AT5G60600,AT5G66850,AT4G31570,AT1G48530,AT5G04000,AT2G16290,AT1G20120,AT2G42930,AT1G13380,AT3G23230,AT3G03330,AT1G12980,AT4G14455,AT5G64380,AT2G41500,AT4G22400,AT4G38780,AT4G14180,AT1G22690,AT3G25500,AT2G34360,AT5G08335,AT3G58760,AT3G53340,AT3G51330,AT2G38970,AT1G78300,AT4G12940,AT3G06500,AT3G21880,AT3G13222,AT1G09830,AT2G18910,AT1G26880,AT2G47300,AT4G05440,AT4G10760,AT3G25900,AT5G44950,AT2G17750,AT2G19990,AT1G16640,AT5G15080,AT4G08990,AT5G11700,AT4G19730,AT5G06270,AT5G47050,AT5G05460,AT5G67150,AT5G14590,AT2G36160,AT1G26270,AT4G27190,AT1G52190,AT1G35420,AT4G04840,AT4G38080,AT4G23620,AT3G03770,AT4G11630,AT5G35737,AT3G04930,AT3G27680,AT3G12020,AT5G37730,AT2G33150,AT2G13570,AT4G18010,AT4G11170,AT2G46860,AT5G45820,AT5G64490,AT5G28410,AT3G56900,AT1G11190,AT5G48380,AT1G19920,AT3G15130,AT3G09690,AT2G46520,AT4G14960,AT5G63260,AT3G12620,AT1G78130,AT1G05850,AT3G60810,AT5G03770,AT2G18980,AT5G57370,AT1G26520,AT4G28560,AT2G42480,AT3G51850,AT4G01820,AT4G30700,AT2G26600,AT5G18630,AT3G45440,AT1G73930,AT5G58470,AT5G61380,AT5G49800,AT5G38130,AT4G39590,AT2G27010,AT5G63970,AT5G15790,AT4G36210,AT2G31610,AT5G57120,AT4G09530,AT4G25540,AT5G54270,AT4G34020,AT2G17740,AT1G44542,AT1G06090,AT5G48810,AT1G51400,AT3G13080,AT4G19560,AT2G10350,AT4G15930,AT2G32290,AT5G03620,AT2G29580,AT3G24540,AT4G15430,AT5G04010,AT2G25490,AT1G20450,AT3G51510 GAETA_ALLOPOLYPLOID/PARENT-MIX5200_PERGENEVAR_UP Up-regulated genes that were nonadditively expressed in allopolyploid line 1200 relative to the 1:1 parent mix--parentmix_5200_FDR_PerGeneVar (Dataset S4 PubmedID:19274085) AT4G22570,AT1G09070,AT5G38710,AT2G06960,AT1G17750,AT2G44820,AT4G34430,AT2G25430,AT3G30247,AT3G26070,AT1G30000,AT3G30210,AT3G49550,AT4G22940,AT2G45160,AT3G04280,AT1G15060,AT1G53830,AT3G61240,AT1G15190,AT5G38680,AT2G22920,AT5G61970,AT1G01420,AT5G65650,AT5G66720,AT4G04320,AT3G60830,AT5G06920,AT5G38550,AT1G29240,AT3G01060,AT5G47370,AT3G54750,AT5G05480,AT1G51480,AT5G11890,AT5G19570,AT1G67290,AT5G40510,AT2G31160,AT5G23080,AT5G41570,AT5G62150,AT4G39380,AT4G38050,AT1G06420,AT4G21050,AT2G40910,AT5G17650,AT1G32220,AT4G37260,AT4G33490,AT3G04090,AT1G55680,AT5G37020,AT1G27540,AT1G69230,AT1G49970,AT1G04640,AT1G13150,AT5G40360,AT5G61380,AT3G09360,AT4G25530,AT2G17380,AT1G29990,AT5G54430,AT1G03457,AT3G27100,AT5G03970,AT1G78750,AT4G30320,AT2G45100,AT1G26340,AT4G27580,AT1G35720,AT5G02180,AT3G14620,AT3G07470,AT3G05180,AT5G50350,AT4G19990,AT4G17620,AT2G32480,AT2G41780,AT3G59670,AT1G65470,AT5G65110,AT5G39800,AT5G43610,AT1G16290,AT5G16990,AT5G63590,AT5G63170,AT3G12145,AT4G17540,AT3G06810,AT3G22780,AT1G63140,AT1G55010,AT2G31840,AT1G79440,AT5G08280,AT4G28610,AT2G30615,AT5G62260,AT5G15450,AT3G05530,AT4G04040,AT5G10340,AT3G56410,AT5G23650,AT3G14000,AT3G11940,AT5G38380,AT1G25054,AT5G41640,AT2G05220,OBSOLETE,AT1G62360,AT2G10550,AT3G59500,AT3G53990,AT5G50650,AT1G68820,AT4G38530,AT1G74090,AT3G47400,AT5G01220,AT1G07230,AT2G38050,AT4G35670,AT1G55180,AT1G74840,AT5G66810,AT2G44790,AT4G22700,AT3G54870,AT5G45470,AT4G34560,AT2G19690,AT1G07700,AT4G35690,AT1G77420,AT1G49100,AT1G69480,AT5G07390,AT4G27760,AT5G62340,AT1G23700,AT1G16860,AT2G05760,AT5G37580,AT1G66070,AT2G47880,AT5G24360,AT4G04273,AT1G67800,AT2G15910,AT3G43890,AT3G49350,AT4G00400,AT4G27670,AT5G12020,AT3G27980,AT3G46980,AT4G01310,AT5G60710,AT5G41540,AT1G21740,AT1G22550,AT1G50120,AT5G65010,AT4G04480,AT1G15580,AT3G21850,AT1G19890,AT5G56510,AT3G56650,AT1G17540,AT1G27640,AT5G37320,AT5G23320,AT5G67050,AT4G36010 GAETA_ALLOPOLYPLOID/PARENT-MIX5200_PERGENEVAR_DN Down-regulated genes that were nonadditively expressed in allopolyploid line 1200 relative to the 1:1 parent mix--parentmix_5200_FDR_PerGeneVar (Dataset S4 PubmedID:19274085) AT4G25390,AT2G02500,AT3G10540,AT1G80990,AT5G07620,AT3G57550,AT5G17750,AT3G20020,AT2G30710,AT1G18520,AT1G55860,AT2G30070,AT3G17660,AT2G39850,AT3G42380,AT4G13930,AT2G02350,AT1G77990,AT4G32170,AT2G04050,AT5G49710,AT5G53320,AT5G14210,AT1G36320,AT3G04840,AT3G51970,AT3G63300,AT3G55020,AT4G33985,AT3G06710,AT2G25760,AT5G03930,AT3G14070,AT4G03550,AT5G46940,AT2G02730,AT1G65070,AT4G11770,AT1G50240,AT1G64020,AT1G21230,AT3G17450,AT2G14050,AT2G20040,AT2G19210,AT1G53570,AT3G17150,AT5G50270,AT3G05860,AT2G30090,AT3G47500,AT1G76720,AT4G37130,AT5G11830,AT5G46870,AT1G14100,AT4G32690,AT2G37410,AT3G27180,AT3G42580,AT3G23580,AT3G06780,AT1G20300,AT3G56030,AT2G37240,AT4G27610,AT5G38560,AT3G62360,AT4G20340,AT5G66055,AT2G45990,AT5G41980,AT1G26830,AT3G29250,AT3G43770,AT1G06960,AT1G60160,AT4G11150,AT3G01180,AT5G14080,AT3G12460,AT3G47030,AT5G48870,AT1G22480,AT4G17130,AT4G30120,AT5G58400,AT3G62130,AT4G18430,AT1G76990,AT5G53660,AT5G42830,AT2G30240,AT3G60130,AT3G45470,AT4G24630,AT1G30670,AT4G24220,AT2G33370,AT1G30480,AT4G29460,AT4G01700,AT1G06340,AT4G09860,AT1G77810,AT1G07840,AT2G17480,AT1G64640,AT1G03890,AT4G23200,AT1G59171,AT3G07730,AT1G76850,AT4G20400,AT5G44680,AT4G14530,AT2G15970,AT4G33600,AT1G43700,AT1G77360,AT2G44430,AT4G19630,AT1G30460,AT5G46390,AT2G45410,AT2G34810,AT5G47550,AT3G18165,AT1G58450,AT1G68780,AT5G61560,AT4G30810,AT3G56890,AT1G44180,AT2G06120,AT1G14610,AT1G21065,AT5G08010,AT2G46190,AT4G09430,AT2G36050,AT2G01810,AT3G15250,AT2G28610,AT4G11290,AT5G15880,AT1G18870,AT2G15690,AT1G05510,AT1G16440,AT1G02090,AT4G35900,AT4G22420,AT5G48370,AT2G35450,AT5G38990,AT5G20410,AT1G68590,AT5G38620,AT1G64400,AT5G49910,AT2G17340,AT2G20740,AT2G33100,AT4G24950,AT3G50880,AT1G69280,AT1G43190,AT1G01570,AT4G03440,AT1G22970,AT1G55915,AT2G42180,AT4G36590,AT1G64090,AT3G62820,AT4G21040,AT2G46830,AT3G22010,AT2G46225,AT5G44920,AT5G50160,AT1G28610,AT4G35580,AT4G29900,AT4G08690,AT4G30560,AT3G54860,AT5G53620,AT3G08580,AT5G46260,AT1G17500,AT5G55020,AT1G32730,AT1G16160,AT3G45390,AT1G04600,AT5G26670,AT3G13900,AT1G72740,AT2G22670,AT1G79720,AT1G11910,AT1G11870,AT3G48750,AT2G22430,AT1G12730,AT1G31810,AT1G05010,AT2G35605,AT2G34420,AT1G03106,AT3G43150,AT4G27410,AT4G04340,AT5G26680,AT2G22850,AT3G60800,AT1G75410,AT2G14850,AT2G43970,AT1G61795,AT3G49380,AT3G47540,AT2G38410,AT4G03390,AT2G28600,AT1G45050,AT1G27320,AT1G31850,AT1G74190,AT2G06700,AT1G30230,AT5G43700,AT1G08315,AT2G15900,AT2G39210,AT5G17010,AT2G36330,AT3G16110,AT1G49760,AT1G61390,AT5G37120,AT1G28690,AT4G04750,AT4G39650,AT4G36600,AT4G33000,AT3G13175,AT1G33350,AT3G20310,AT4G04955,AT4G14000,AT1G68670,AT3G26320,AT4G26850,AT4G24940,AT1G32970,AT2G31380,AT5G65820,AT4G25020,AT3G47610,AT2G39040,AT1G21864,AT1G64060,AT2G31180,AT5G60930,AT1G63640,AT4G25360,AT4G15096,AT5G36035,AT4G24550,AT4G02990,AT3G03410,AT1G03020,AT4G39600,AT3G19760,AT3G04350,AT4G29860,AT2G34070,AT4G11680,AT1G51210,AT4G23050,AT2G23800,AT5G53670,AT1G08770,AT3G01410,AT1G32390,AT3G12590,AT3G32050,AT1G51360,AT3G51500,AT1G65260,AT4G03430,AT4G02500,AT2G18370,AT3G59670,AT4G28800,AT2G45580,AT3G58360,AT3G46630,AT3G48090,AT2G05410,AT5G60160,AT5G06740,AT1G75180,AT1G14780,AT1G49475,AT2G04790,AT4G16950,AT5G53740,AT4G04760,AT2G18640,AT1G03390,AT3G53640,AT5G08200,AT5G07510,AT2G01310,AT3G55190,AT5G06170,AT4G21460,AT2G21140,AT2G29480,AT2G41700,AT1G31830,AT1G23740,AT2G17570,AT4G04690,AT3G06130,AT1G69360,AT3G42550,AT1G79730,AT1G25290,AT4G05540,AT1G76920,AT3G62260,AT1G68280,AT1G30950,AT3G22230,AT4G19620,AT1G36280,AT3G43970,AT3G21070,AT2G18840,AT1G08710,AT2G18710,AT5G62080,AT1G75440,AT2G37230,AT3G14650,AT2G42840,AT3G48630,AT2G17750,AT1G78130,AT1G20450 GAETA_ALLOPOLYPLOID/PARENT-MIX5250_COMMONVAR_UP Up-regulated genes that were nonadditively expressed in allopolyploid line 1200 relative to the 1:1 parent mix--parentmix_5250_FDR_CommonVar (Dataset S5 PubmedID:19274085) AT5G04000,AT4G34600,AT1G66770,AT3G31330,AT2G05310,AT3G20580,AT3G53230,AT2G03480,AT1G17990,AT3G62940,AT4G02075,AT4G33770,AT3G42540,AT5G01240,AT5G28350,AT1G27090,AT3G47965,AT1G24440,AT1G23680,AT1G34390,AT5G62350,AT1G67390,AT4G11630,AT4G18160,AT5G22450,AT1G19400,AT5G54280,AT5G18290,AT4G35350,AT3G02640,AT5G10990,AT1G04630,AT1G10070,AT2G37430,AT3G25717,AT5G17160,AT5G66140,AT3G28345,AT3G20360,AT1G55390,AT5G09910,AT3G12060,AT4G02720,AT3G14650,AT4G12500,AT1G79200,AT1G71000,AT3G50820,AT1G61450,AT1G33480,AT1G16390,AT4G16040,AT2G32710,AT4G25690,AT3G01820,AT3G29580,AT1G46336,AT3G43320,AT4G36990,AT2G38110,AT1G48020,AT4G24280,AT3G63170,AT2G42930,AT1G21980,AT4G29240,AT4G12910,AT2G38185,AT5G38710,AT2G33700,AT5G64580,AT1G69740,AT5G07710,AT5G67420,AT1G24620,AT5G10040,AT1G49640,AT1G01220,AT1G66220,AT1G29270,AT1G30450,AT5G13490,AT3G27540,AT3G06320,AT1G53470,AT5G05510,AT3G18830,AT3G01890,AT1G71300,AT1G14220,AT4G30430,AT2G29400,AT4G32930,AT4G12690,AT5G25780,AT1G28630,AT4G19690,AT5G42670,AT3G54120,AT4G37620,AT1G56130,AT5G53470,AT2G36750,AT1G48090,AT5G01260,AT3G09710,AT2G47300,AT2G17200,AT1G75790,AT3G51360,AT5G14060,AT1G59550,AT4G15450,AT2G19680,AT5G54260,AT4G39710,AT3G62960,AT3G26390,AT3G23240,AT3G60240,AT2G33845,AT3G23600,AT3G33530,AT3G16420,AT1G20440,AT4G21105,AT4G13650,AT4G14270,AT2G02770,AT4G16400,AT3G54590,AT1G79880,AT4G26040,AT5G43630,AT1G20540,AT1G69820,AT5G51680,AT1G19740,AT5G55600,AT3G48730,AT1G16000,AT5G57480,AT1G50650,AT1G03060,AT1G61420,AT3G20330,AT1G22940,AT5G27260,AT3G23000,AT1G34560,AT2G26180,AT1G75290,AT5G54310,AT2G31470,AT5G45350,AT4G04850,AT1G28270,AT4G10640,AT1G29630,AT4G01520,AT5G13930,AT4G33550,AT1G14080,AT4G29490,AT4G14590,AT1G43040,AT2G39740,AT1G19640,AT3G03050,AT4G34660,AT1G16300,AT5G47990,AT3G03000,AT3G23270,AT1G72340,AT5G58850,AT4G38050,AT5G52430,AT3G46220,AT5G24410,AT5G04910,AT5G64000,AT3G19280,AT1G02780,AT1G75090,AT1G55620,AT1G07790,AT4G24390,AT5G09430,OBSOLETE,AT5G23870,AT5G47660,AT3G47360,AT5G59390,AT1G04945,AT4G11680,AT5G50700,AT4G21580,AT3G51540,AT5G62470,AT4G36830,AT5G36880,AT4G15240,AT1G31812,AT5G61440,AT3G62250,AT1G67030,AT3G19270,AT3G50770,AT1G06210,AT2G15820,AT4G32900,AT2G23050,AT1G35650,AT3G56490,AT2G21900,AT4G32140,AT1G19610,AT3G54600,AT5G37730,AT3G53210,AT2G33540,AT2G14170,AT3G06850,AT5G22600,AT4G36180,AT3G27550,AT4G08300,AT4G14050,AT5G25280,AT4G26800,AT4G38230,AT5G04940,AT1G02060,AT1G05370,AT5G01270,AT4G39300,AT4G35140,AT4G33630,AT2G32770,AT1G28020,AT3G58410,AT1G15330,AT4G13850,AT4G05170,AT2G32560,AT3G15200,AT1G12790,AT1G22660,AT3G54680,AT5G35860,AT2G04780,AT2G36680,AT5G50430,AT4G13540,AT4G09780,AT3G14290,AT5G38650,AT1G09350,AT4G34710,AT2G21640,AT5G22750,AT4G11880,AT2G20420,AT4G14455,AT5G01820,AT3G60540,AT3G54910,AT4G33730,AT5G54640,AT5G49970,AT2G26460,AT1G22260,AT3G19790,AT3G13940,AT5G07340,AT5G12480,AT5G43080,AT4G21100,AT4G03630,AT1G11630,AT5G39620,AT1G55070,AT1G55640,AT3G18280,AT3G02730,AT1G70620,AT2G10070,AT3G13320,AT1G54780,AT5G65900,AT1G46912,AT5G22860,AT3G29190,AT1G09470,AT2G42590,AT1G80270,AT3G44180,AT3G10160,AT2G42790,AT5G02440,AT1G50870,AT5G12920,AT1G21750,AT5G50830,AT3G57290,AT5G22590,AT4G14020,AT5G05010,AT2G21190,AT1G61290,AT4G12390,AT3G29830,AT3G54250,AT2G35310,AT2G13900,AT5G46920,AT1G51070,AT1G08430,AT1G71490,AT4G03420,AT3G06390,AT2G10930,AT5G22810,AT5G52040,AT5G65380,AT4G10210,AT3G61880,AT3G59260,AT5G23390,AT1G53000,AT2G26150,AT2G46830,AT3G45900,AT5G53610,AT4G04090,AT3G06020,AT1G21450,AT3G02160,AT3G25730,AT3G04690,AT1G28190,AT2G30440,AT4G03450,AT3G22400,AT3G10200,AT5G22920,AT1G47610,AT2G32590,AT4G26600,AT1G76180,AT2G18110,AT1G26630,AT1G65340,AT2G27900,AT5G10020,AT2G10350,AT4G05440,AT1G20650,AT1G52520,AT2G26580,AT3G18600,AT3G03810,AT2G36160,AT3G12620,AT2G41450,AT1G26600,AT1G37020,AT2G26270,AT3G53720,AT5G45600,AT3G18420,AT5G66270,AT1G69020,AT5G46930,AT5G65950,AT4G20820,AT4G01480,AT5G51380,AT5G11990,AT2G38960,AT5G23400,AT5G67550,AT3G05670,AT1G23320,AT3G28070,AT1G02880,AT2G14560,AT4G09080,AT1G54710,AT4G16540,AT5G16680,AT1G65050,AT5G52180,AT2G28200,AT3G21300,AT5G38720,AT4G03000,AT3G61270,AT3G50440,AT4G15870,AT1G52880,AT5G22060,AT3G03820,AT1G12110,AT5G07120,AT5G11110,AT3G01326,AT2G13650,AT4G29970,AT1G09770,AT4G19470,AT2G45610,AT5G47700 GAETA_ALLOPOLYPLOID/PARENT-MIX5250_COMMONVAR_DN Down-regulated genes that were nonadditively expressed in allopolyploid line 1200 relative to the 1:1 parent mix--parentmix_5250_FDR_CommonVar (Dataset S5 PubmedID:19274085) AT5G14590,AT5G60490,AT4G04950,AT3G28710,AT5G35400,AT1G73440,AT2G31510,AT3G19800,AT1G79060,AT1G29400,AT4G22950,AT3G55900,AT2G14670,AT3G28857,AT5G63100,AT3G51530,AT4G24510,AT2G15390,AT3G18020,AT4G31000,AT3G48230,AT4G03480,AT2G38510,AT5G56050,AT2G15130,AT3G03470,AT3G11400,AT3G51700,ATCG01020,AT4G23550,AT5G13830,AT4G14090,AT5G63260,AT5G17490,AT3G06680,AT2G17510,AT1G71220,AT5G02350,AT4G27450,AT1G04120,AT5G57850,AT3G23490,AT5G35900,AT5G38410,AT2G36980,AT1G19260,AT3G11540,AT5G18050,AT5G52790,AT1G53460,AT1G17370,AT1G32750,AT1G36050,AT4G37860,AT1G17420,AT4G09990,AT4G35270,AT3G06470,AT5G11540,AT4G38510,AT4G37630,AT1G72550,AT1G75470,AT3G21900,AT2G28540,AT3G16450,AT3G16620,AT5G41890,AT4G18380,AT1G27350,AT2G16200,AT5G08780,AT5G40310,AT5G35995,AT4G10890,AT1G56550,AT2G34230,AT3G58010,AT1G17460,AT1G53940,AT3G29630,AT3G23760,AT1G73820,AT3G26420,AT3G07500,AT5G38150,AT4G13860,AT1G50400,AT3G05250,AT4G08590,AT1G55030,AT4G35250,AT2G38350,AT5G16900,AT5G55100,AT5G38900,AT3G01130,AT3G48760,AT4G10760,AT2G35290,AT3G03760,AT4G35990,AT2G07390,AT5G52020,AT3G25700,AT1G48090,AT5G15080,AT5G53990,AT1G26410,AT1G07310,AT3G62840,AT1G73910,AT3G63440,AT3G47990,AT3G13250,AT2G05180,AT1G64780,AT4G23380,AT1G11020,AT3G16430,AT4G05060,AT5G60950,AT5G66850,AT4G11200,AT2G27810,AT4G09250,AT3G51510,AT4G05530,AT2G16780,AT3G44090,AT1G20090,AT2G47040,AT1G54690,AT5G49270,AT3G25500,AT3G53340,AT4G39620,AT4G01920,AT2G19730,AT4G39340,AT3G09700,AT1G31710,AT2G14020,AT3G12120,AT5G57840,AT5G03680,AT2G31960,AT1G16610,AT5G12340,AT5G44570,AT4G21790,AT1G26670,AT5G62920,AT3G10400,AT5G42870,AT3G12110,AT4G25620,AT3G49970,AT5G17740,AT5G26860,AT4G29540,AT2G38720,AT1G28240,AT4G31500,AT1G72120,AT4G08800,AT5G63040,AT5G47910,AT5G61150,AT3G02210,AT5G15920,AT2G33550,AT4G28715,AT1G02050,AT1G18070,AT4G30910,AT5G56600,AT1G08970,AT5G49800,AT5G67460,AT2G35520,AT2G44260,AT1G36280,AT1G35530,AT2G29290,AT5G52010,AT4G34740,AT3G01360,AT4G07960,AT5G44350,AT5G04010,AT1G50110,AT4G29930,AT5G10900,AT3G14050,AT3G15570,AT3G16610,AT5G48380,AT1G05730,AT3G01400,AT1G51390,AT1G74370,AT1G18530,AT5G03620,AT1G36320,AT5G15280,AT5G61380,AT5G59840,AT1G60810,AT3G19840,AT5G58980,AT3G42680,AT2G39140,AT3G18800,AT1G76340,AT5G04480,AT5G14930,AT2G05290,AT1G34750,AT4G20150,AT1G15970,AT2G31610,AT5G05380,AT2G20690,AT2G01210,AT3G61390,AT5G02870,AT3G12880,AT4G28470,AT3G26030,AT1G73310,AT2G29190,AT5G18630,AT4G17860,AT1G09450,AT3G18350,AT3G62090,AT1G32940,AT5G61130,AT5G57010,AT4G16515,AT1G56100,AT1G05920,AT1G10780,AT4G33230,AT5G63560,AT4G03740,AT2G17750,AT3G10280,AT5G47440,AT2G28580,AT2G25250,AT5G51950,AT1G22290,AT2G39050,AT5G47230,AT1G66930,AT5G20990,AT2G18320,AT3G48160,AT5G28910,AT2G26190,AT3G15350,AT3G19780,AT1G19920,AT5G05560,AT5G22710,AT5G48030,AT3G08510,AT4G04030,AT1G60240,AT3G03440,AT3G51895,AT4G15570,AT4G25540,AT2G06500,AT4G16900,AT4G22780,AT1G61550,AT1G80690,AT3G48550,AT2G19990,AT1G53750,AT4G33970,AT3G44550,AT4G02270,AT1G73060,AT2G30960,AT3G50640,AT2G17740,AT3G06170,AT5G54270,AT3G02000,AT5G54600,AT5G37690,AT5G37290,AT5G16730,AT2G10970,AT4G21326,AT3G48400,AT1G60800,AT5G46080,AT2G36040,AT2G41500,AT2G10350,AT3G20970,AT3G14310,AT5G66050,AT4G35070,AT4G13460,AT5G48810,AT1G28200,AT1G14660,AT3G05165,AT3G14690,AT1G73430,AT2G02590,AT1G06890,AT4G26770,OBSOLETE,AT5G65460,AT1G06090,AT5G16390,AT5G54620,AT2G43140,AT5G05820,AT1G62340,AT3G07060,AT3G15950,AT2G22980,AT5G10510,AT4G24090,AT1G24625,AT3G04080,AT5G01170,AT3G12100,AT2G18570,AT1G20130,AT3G45440,AT3G01810,AT3G54580,AT1G42550,AT1G29310,AT3G27473,AT2G43930,AT3G16370,AT3G49930,AT3G28720,AT5G01630,AT4G27100,AT3G13710,AT1G53670,AT1G43890,AT5G07970,AT4G14340,AT3G49560,AT5G05320,AT5G16120,AT5G11020,AT1G80640,AT2G29300,AT1G11050,AT3G15180,AT5G66400,AT4G14960,AT4G26470,AT2G36800,AT2G25490,AT1G74280,AT2G05647,AT3G46840,AT1G79950,AT5G36228,AT5G55990,AT1G71330,AT5G43650,AT5G20500,AT1G47600,AT1G60400,AT2G07770,AT4G21660,AT5G63230,AT3G01680,AT4G17480,AT1G15180,AT3G09390,AT5G55310,AT1G50640,AT5G39420,AT4G10540,AT1G79010 GAETA_ALLOPOLYPLOID/PARENT-MIX5250_PERGENEVAR_UP Up-regulated genes that were nonadditively expressed in allopolyploid line 1200 relative to the 1:1 parent mix--parentmix_5250_FDR_PerGeneVar (Dataset S5 PubmedID:19274085) AT3G62940,AT2G26580,AT4G13040,AT1G49470,AT1G32240,AT1G17750,AT3G54750,AT3G07820,AT3G04280,AT3G49290,AT5G10450,AT1G15060,AT1G61840,AT2G35730,AT3G49590,AT3G12640,AT3G56160,AT3G09550,AT5G18390,AT3G21720,AT5G26980,AT3G23380,AT2G46930,AT3G30210,AT3G61500,AT1G61610,AT5G19960,AT2G01770,AT2G40860,AT3G19770,AT1G72110,AT1G52810,AT4G23780,AT3G44630,AT4G32510,AT5G18140,AT3G51600,AT1G26820,AT3G24420,AT2G48130,AT4G17660,AT1G79660,AT4G23710,AT3G12490,AT2G46890,AT1G30370,AT5G40348,AT3G45680,AT1G17970,AT4G12530,AT1G31250,AT5G27130,OBSOLETE,AT4G21540,AT4G34430,AT3G48880,AT3G50210,AT3G61710,AT1G73325,AT3G08770,AT3G61130,AT3G10990,AT3G24430,AT2G39490,AT1G30110,AT1G54955,AT4G31020,AT1G48280,AT1G49590,AT2G44990,AT2G19330,AT3G10910,AT1G65580,AT3G11290,AT3G48150,AT3G20850,AT4G34510,AT2G23420,AT1G32340,AT5G55030,AT1G19450,AT3G59550,AT3G07760,AT1G14690,AT3G21390,AT1G63140,AT4G34440,AT2G22610,AT3G16990,AT2G36180,AT1G48010,AT2G18630,AT3G44220,AT2G21150,AT5G39990,AT1G65470,AT4G14780,AT1G69480,AT1G31460,AT3G03590,AT1G29830,AT1G42980,AT1G17240,AT1G20680,AT1G30970,AT3G61780,AT3G44440,AT4G26220,AT4G19090,AT3G44980,AT3G06910,AT3G60100,AT3G04810,AT2G46620,AT1G34640,AT5G58940,AT3G11210,AT3G28007,AT1G06890,AT1G13820,AT1G03550,AT2G45730,AT4G08500,AT1G15580,AT1G67830,AT2G32800,AT2G18940,AT3G27910,AT4G26940,AT5G20300,AT3G09360,AT3G02650,AT3G22950,AT2G32040,AT3G10650,AT4G27120,AT4G33870,AT3G01900,AT3G45140,AT3G60490,AT2G32860,AT2G38180,AT1G09850,AT4G08510,AT3G14090,AT4G39380,AT1G51910,AT3G25590,AT3G59020,AT3G57650,AT1G76760,AT1G21890,AT3G05060,AT3G07568,AT4G26310,AT4G26690,AT2G39780,AT3G09970,AT4G36560,AT1G50040,AT2G01920,AT1G20200,AT4G05380,AT3G25940,AT4G31560,AT4G27670,AT3G21340,AT3G51760,AT3G05900,AT1G21650,AT1G57650,AT1G30270,AT5G54050,AT2G43960,AT1G23710,AT4G36090,AT4G01000,AT4G36380,AT2G45060,AT3G07440,AT4G14550,AT1G30700,AT1G67800,AT3G42160,AT1G11765,AT2G43840,AT2G37480,AT4G39070,AT4G29070,AT3G19160,AT4G15560,AT3G48840,AT4G15755,AT3G53000,AT4G04180,AT2G29130,AT1G30590,AT3G03320,AT1G23180,AT1G27640,AT3G22590,AT3G24040,AT1G22830,AT3G21220,AT4G20970,AT2G17850,AT1G51960,AT3G26990,AT4G21500,AT4G33840,AT5G26220,AT2G23060,AT4G21050,AT3G09980,AT2G33770,AT1G53590,AT2G12880,AT1G32080,AT2G25760,AT3G46580,AT3G57930,AT1G43900,AT4G03590,AT4G22720,AT2G48060,AT4G26100,AT4G01460,AT3G52050,AT3G12530,AT3G47630,AT3G44100,AT4G08550,AT3G08840,AT1G73970,AT3G52420,AT3G49430,AT1G05805,AT3G61550,AT1G01230,AT3G06420,AT4G05220,AT2G28090,AT2G14690,AT4G29090,AT4G25760,AT3G12890,AT3G15900,AT3G06090,AT4G10850,AT4G08840,AT3G22020,AT4G38150,AT4G15230,AT3G47980,AT1G53920,AT1G11440,AT4G31400,AT3G24660,AT3G07970,AT4G01940,AT1G04330 GAETA_ALLOPOLYPLOID/PARENT-MIX5250_PERGENEVAR_DN Down-regulated genes that were nonadditively expressed in allopolyploid line 1200 relative to the 1:1 parent mix--parentmix_5250_FDR_PerGeneVar (Dataset S5 PubmedID:19274085) AT3G21660,AT3G06040,AT2G26000,AT1G22110,AT1G28760,AT3G13235,AT4G36140,AT3G09440,AT1G21190,AT3G19055,AT1G05250,AT3G62880,AT2G18070,AT3G19100,AT1G76390,AT3G14840,AT3G49810,AT1G75680,AT3G48920,AT1G78050,AT2G36020,AT1G27670,AT3G45960,AT1G03170,AT3G04140,AT3G61140,AT4G09840,AT1G20380,AT1G29040,AT3G17200,AT3G56810,AT3G52520,AT1G30460,AT4G02450,AT3G59430,AT3G61890,AT4G27630,AT3G49530,AT1G12910,AT3G07550,AT3G25980,AT3G01430,AT1G74920,AT2G19810,AT4G32610,AT1G07340,AT5G45900,AT2G15480,AT1G32990,AT5G25870,AT4G31040,AT4G22050,AT1G57765,AT3G58610,AT1G65020,AT1G67420,AT5G20850,AT1G59920,AT5G43760,AT1G23030,AT3G44770,AT1G61795,AT2G04235,AT5G28210,AT3G56870,AT1G08900,AT5G49910,AT3G53170,AT1G18870,AT2G21860,AT1G50960,AT5G27100,AT2G05830,AT1G66900,AT1G67880,AT1G02150,AT5G27150,AT3G16110,AT1G80610,AT5G27230,AT1G05510,AT2G25090,AT4G39910,OBSOLETE,AT4G23530,AT1G10420,AT4G00231,AT1G26550,AT1G05890,AT1G79280,AT1G64090,AT3G62870,AT1G08315,AT1G03650,AT4G22970,AT3G56980,AT3G05240,AT1G53520,AT2G07310,AT1G61100,AT2G15690,AT1G02020,AT2G45580,AT1G56050,AT1G22882,AT4G13110,AT2G04790,AT5G27220,AT4G24020,AT1G33540,AT2G44870,AT1G10500,AT1G68810,AT3G51500,AT3G50590,AT2G15970,AT4G16840,AT2G28250,AT2G27330,AT2G31180,AT2G17570,AT1G30950,AT3G61010,AT3G43990,AT3G06130,AT2G28010,AT4G17810,AT1G76920,AT2G18710,AT3G59670,AT4G21840,AT4G36980,AT4G34320,AT4G36600,AT4G36920,AT4G03820,AT4G04040,AT4G24950,AT4G24380,AT4G21520,AT4G34280,AT4G27010,AT4G39050,AT4G13830,AT4G11350,AT4G16170,AT4G16560,AT4G24600,AT4G00870,AT4G28240,AT4G01140,AT4G13560,AT4G15390,AT4G33020,AT4G02340,AT4G29860,AT4G21860,AT5G53670,AT5G60970,AT5G40330,AT5G04210,AT5G40350,AT5G03840,AT5G55000,AT5G64180,AT5G38710,AT5G66620,AT5G20070,AT5G35180,AT5G06680,AT5G56580,AT5G62530,AT5G60330,AT5G48210,AT5G51960,AT5G65010,AT5G65570,AT5G06010,AT5G64820,AT5G51570,AT5G24200,AT5G24190,AT5G13440,AT5G23550,AT5G23690,AT5G01160,AT5G01190,AT5G47690,AT5G14730,AT5G13870,AT3G09080,AT5G03600,AT5G36210,AT5G56960,AT5G04440,AT5G02640,AT5G59300,AT5G12080,AT5G50960,AT5G61270,AT5G08290,AT5G07930,AT5G64340,AT5G41440,AT5G13850,AT5G06740,AT5G24000,AT5G41050,AT5G64350,AT5G10430,AT5G48390,AT5G04040,AT5G67270,AT5G56230,AT5G61570,AT5G62520,AT5G07040,AT5G45770,AT5G53280,AT5G03430,AT5G01280,AT5G14230,AT5G01850,AT5G36710,AT5G50040,AT5G61250,AT5G36240,AT5G53320,AT5G45930,AT5G50230,AT5G08415,AT5G66560,AT5G13280,AT5G58740,AT5G61520,AT5G64690,AT5G52930,AT5G16840,AT5G57940,AT5G07030,AT5G37530,AT5G54410,AT5G50000,AT5G44680,AT5G08300,AT5G57625,AT5G60160,AT5G65220,AT5G24735,AT5G14030,AT5G13740,AT5G56660,AT5G07080,AT5G14250,AT5G08090,AT5G10800,AT5G47225,AT5G55850,AT5G14050,AT5G57280,AT5G39190,AT5G67220,AT5G60450,AT5G61500,AT5G24680,AT5G36870,AT5G45520,AT5G45120,AT5G43420,AT5G38460,AT5G42300,AT5G19570,AT5G12320,AT5G57870,AT5G38700,AT5G57010,AT5G44750,AT5G20650,AT5G53370,AT5G61550,AT5G17660,AT5G66920,AT5G64910,AT5G43940,AT5G58410,AT5G39730,AT5G47650,AT5G57130,AT5G22440,AT5G06750,AT5G52590,AT5G16030,AT5G47220,AT5G48050,AT5G44380,AT5G14320,AT5G65910,AT5G13820,AT5G65810,AT5G57630,AT5G36100,AT5G41640,AT5G09610,AT5G63960,AT5G15760,AT5G15730,AT5G45460,AT5G49090,AT5G09240,AT5G39940,AT5G59570,AT5G57450,AT5G23310,AT5G50710,AT5G63170,AT5G39630,AT5G18110,AT5G43460,AT2G29360,AT2G45950,AT2G30010,AT1G47290,AT1G35290,AT3G01060,AT3G56090,AT5G02840,AT5G43830,AT5G65490,AT4G38040,AT3G61240,AT5G17650,AT4G38460,AT3G24160,AT1G15370,AT3G15630,AT3G51090,AT1G52380,AT3G52190,AT4G32040,AT2G25430,AT3G53190,AT4G04320,AT3G62630,AT4G28050,AT3G02720,AT1G73500,AT1G17860,AT2G44950,AT4G04630,AT5G39580,AT4G08390,AT2G46420,ATMG00650,AT2G20835,AT3G02090,AT5G42020,AT1G75950,AT4G37790,AT1G16905,AT5G55790,AT4G17850,AT4G25690,AT4G08770,AT4G09440,AT3G17230,AT3G22770,AT5G60500,AT5G62720,AT5G62340,AT5G52690,AT5G52760,AT5G54420,AT5G39800,AT5G58420,AT5G15990,AT1G29410,AT1G51240,AT5G26130,AT2G21980,AT2G16580,AT1G12390,AT1G33220,AT1G27330,AT1G19640,AT1G51390,AT3G03830,AT1G72740,AT3G44010,AT5G20570,AT5G34940,AT5G56280,AT1G78870,AT1G13990,AT1G73030,AT3G13720,AT4G21090,AT1G30230,AT3G42200,AT5G37120,AT1G45050,AT1G58390,AT3G51080,AT3G59500,AT3G42350,AT3G50300,AT5G15180,AT4G18300,AT4G17930,AT4G23200,AT4G33750,AT4G37970,AT4G37530,AT4G11720,AT4G11090,AT4G11410,AT4G39600,AT4G34770,AT4G11230,AT4G00970,AT5G62310,AT3G32190,AT4G08690,AT4G16060,AT4G30320,AT5G02060,AT5G02680,AT5G07390,AT3G26140,AT3G26250,AT3G24330,AT3G28520,AT5G36690,AT5G51420,AT5G06200,AT3G21170,AT3G19020,AT5G24350,AT5G49050,AT5G53060,AT5G38550,AT5G22940,AT5G24260,AT5G65330,AT5G41820,AT5G05870,AT5G37060,AT1G19720,AT1G62200,AT1G60390,AT1G26830,AT3G18640,AT4G24170,AT3G05530,AT1G79940,AT5G66320,AT2G45100,AT2G39830,AT2G23760,AT2G29330,AT2G38410,AT2G46160,AT2G04210,AT2G36580,AT2G42960,AT2G20540,AT2G20550,AT2G45080,AT2G25140,AT2G17750,AT2G42090,AT5G01290,AT4G03170,AT1G20750,AT3G42120,AT3G12410,AT1G36020,AT1G68270,AT3G01080,AT3G04090,AT2G27530,AT2G03010,AT1G12300,AT3G51300,AT4G19430,AT1G34130,AT4G29350,AT2G37750,AT4G21280,AT1G33250,AT5G06570,AT4G29130,AT5G13430,AT2G41370,AT1G05300,AT4G04070,AT5G36035,AT3G19510,AT2G06700,AT2G06750,AT5G65180,AT5G20330,AT3G46670,AT4G26250,AT4G10520,AT4G08370,AT4G00340,AT4G00930,AT4G04740,AT4G05140,AT5G01330,AT5G04700,AT3G28820,AT5G11230,AT3G20950,AT3G22720,AT3G20090,AT5G59680,AT1G52100,AT2G44890,AT2G29140,AT1G46696,AT3G45080,AT2G16370,AT2G04070,AT1G17500,AT1G20570,AT1G21070,AT1G13350,AT1G78000,AT1G64430,AT1G26240,AT1G60780,AT2G34500,AT2G34970,AT3G16440,AT5G16990,AT2G41790,AT3G49120,AT4G12300,AT2G01670,AT3G18610,AT2G04330,AT2G41740 GAETA_ALLOPOLYPLOID/PARENT-MIX6400_COMMONVAR_UP Up-regulated genes that were nonadditively expressed in allopolyploid line 1200 relative to the 1:1 parent mix--parentmix_6400_FDR_CommonVar (Dataset S6 PubmedID:19274085) AT5G11080,AT2G10350,AT2G43420,AT5G23170,AT2G20450,AT1G54780,AT5G48385,AT1G54100,AT4G22400,ATCG01020,AT3G59830,AT2G32590,AT2G21130,AT3G03510,AT4G10740,AT4G11640,AT3G07800,AT3G48000,AT4G13940,AT5G45920,AT1G21610,AT2G17300,AT2G02700,AT2G24940,AT3G17750,AT5G41990,AT2G45310,AT4G31120,AT1G29195,AT1G28327,AT4G30100,AT2G19450,AT5G11610,AT1G07970,AT4G35890,AT3G52810,AT2G15350,AT3G24690,AT3G63200,AT2G10070,AT4G27190,AT1G20440,AT1G78120,AT4G28300,AT5G17120,AT3G54220,AT1G01820,AT5G40370,AT1G36320,AT2G44450,AT3G50920,AT2G05380,AT1G17400,AT1G26350,AT2G42360,AT2G20680,AT1G53340,AT3G17560,AT1G19540,AT5G63230,AT5G59710,AT3G50100,AT2G04170,AT1G63580,AT1G28660,AT4G33730,AT5G06805,AT1G73820,AT2G20780,AT2G37530,AT1G15990,AT1G22990,AT3G03490,AT5G45600,AT4G13370,AT5G11250,AT4G14590,AT3G57290,AT1G24120,AT2G33090,AT5G01290,AT1G60815,AT1G07790,AT3G63370,AT3G26520,AT3G62670,AT2G01440,AT4G24150,AT1G28630,AT1G19090,AT1G23680,AT3G19280,AT4G15910,AT1G06210,AT2G33540,AT5G28570,AT3G49055,AT3G20240,AT3G62090,AT1G68990,AT3G46990,AT2G36590,AT1G54460,AT5G48940,AT1G51260,AT2G23560,AT1G15550,AT3G19900,AT3G18500,AT2G05310,AT1G11590,AT1G50650,AT5G14220,AT2G16290,AT2G18980,AT2G30500,AT3G14230,AT2G23910,AT3G50770,AT2G24240,AT5G16860,AT3G19870,AT5G61200,AT4G08300,AT5G13310,AT3G28415,AT1G10040,AT3G47360,AT1G12110,AT2G36240,AT5G46650,AT1G08930,AT3G25700,AT1G21830,AT3G30840,AT1G61150,AT1G76340,AT1G52300,AT1G48100,AT4G01690,AT4G11250,AT3G04180,AT3G12440,AT4G22130,AT1G72300,AT4G11050,AT2G17420,AT3G23700,AT2G21560,AT2G36170,AT4G35910,AT5G04690,AT1G66850,AT5G03560,AT3G03340,AT2G26620,AT2G25460,AT5G53380,AT2G34180,AT1G16780,AT1G72210,AT1G09190,AT5G39440,AT5G60630,AT4G33700,AT2G42670,AT5G16110,AT4G29720,AT3G48330,AT3G20590,AT4G01350,AT2G30220,AT5G09460,AT1G02770,AT1G01310,AT4G15360,AT2G26850,AT3G60270,AT4G02075,AT5G41060,AT3G43580,AT1G70490,AT3G01760,AT3G17180,AT3G09700,AT3G28890,AT3G24750,AT3G15950,AT2G26300,AT3G03480,AT3G23270,AT2G16200,AT2G46260,AT4G39780,AT5G59150,AT4G17370,AT4G10780,AT3G20600,AT5G57330,AT2G34940,AT3G02600,AT3G23685,AT1G66860,AT2G19390,AT3G63250,AT2G34490,AT4G11630,AT2G38720,AT3G18830,AT1G03430,AT3G23170,AT5G63580,AT5G38680,AT3G33530,AT2G03440,AT3G02640,AT5G52410,AT4G02480,AT2G19970,AT3G50220,AT3G01960,AT1G63570,AT2G23030,AT1G12960,AT5G39650,AT4G38570,AT2G22010,AT3G25855,AT3G58410,AT5G07220,AT4G36760,AT4G22240,AT4G10730,AT5G66100,AT3G25905,AT5G54310,AT2G47580,AT4G05590,AT1G34320,AT1G47960,AT5G61460,AT1G26580,AT2G22800,AT2G26150,AT1G34780,AT2G31060,AT4G21680,AT4G31380,AT4G08500,AT5G58290,AT2G37890,AT3G14290,AT4G35070,AT2G32560,AT3G09710,AT1G74460,AT5G05160,AT2G21550,AT3G27025,AT2G13320,AT1G05550,AT5G43760,AT2G42790,AT1G59740,AT3G22142,AT3G23990,AT3G11040,AT3G13250,AT3G08670,AT3G55180,AT3G53990,AT3G01030,AT4G18870,AT3G05490,AT5G41040,AT2G23310,AT1G19360,AT3G51140,AT5G65020,AT5G13810,AT2G41640,AT3G08860,AT5G06480,AT5G60950,AT1G71950,AT1G47730,AT3G57720,AT5G08170,AT4G00080,AT5G18770,AT1G30930,AT4G35140,AT3G21180,AT1G01220,AT4G09080,AT4G14270,AT3G51880,AT1G27960,AT1G13060,AT3G22790,AT3G03610,AT2G15230,AT3G01860,AT1G04780,AT1G51690,AT5G55600,AT5G39865,AT3G56800,AT4G00730,AT3G56530,AT5G45740,AT1G07310,AT1G50690,AT2G29300,AT3G63430,AT5G67400,AT5G62470,AT1G48960,AT5G10330,AT1G79750,AT3G49240,AT3G45900,AT1G70360,AT3G04740,AT5G35860,AT4G33630,AT5G44580,AT3G15010,AT2G44760,AT3G47090,AT5G19610,AT1G77980,AT3G04680,AT2G44070,AT4G16340,AT1G47490,AT2G30690,AT1G55070,AT1G60490,AT5G10850,AT1G22770,AT3G43910,AT3G07180,AT2G28870,AT1G22760,AT1G72140,AT4G14455,AT2G21190,AT3G43950,AT4G29120,AT5G19450,AT3G14270,AT4G23660,AT3G21300,AT4G26120,AT3G57600,AT1G17990,AT4G37370,AT1G56560,AT4G35250,AT5G60440,AT1G60800,AT4G15830,AT1G28070,AT5G24390,AT3G50910,AT3G13820,AT1G67580,AT1G13320,AT3G04280,AT5G10710,AT5G11660,AT5G62260,AT1G27030,AT3G22650,AT2G16780,AT4G08035,AT3G01810,AT1G07680,AT1G79430,AT5G53930,AT1G60530,AT1G67760,AT1G27950,AT1G18265,AT5G53900,AT1G30450,AT3G14750,AT3G22400,AT4G33970,AT5G44550,AT4G38010,AT3G01990,AT5G05660,AT4G35350,AT2G01050,AT3G50370,AT5G48400,AT5G64040,AT2G39810,AT4G05170,AT2G34010,AT4G34710,AT4G31690,AT3G20780,AT1G18300,AT1G22720,AT5G36700,AT3G24520,AT3G53290,AT2G27900,AT3G15130,AT5G05740,AT5G02570,AT3G10030,AT3G16380,AT1G73060,AT5G58570,AT5G13340,AT5G48530,AT1G68920,AT4G00250,AT4G18080,AT2G43320,AT5G20250,AT5G26910,AT5G23940,AT2G18940,AT2G15180,AT4G13880,AT3G55690,AT3G27850,AT1G15490,AT3G28270,AT5G40030,AT1G68410,AT3G45770,AT3G06220,AT1G65310,AT4G38850,AT3G19190,AT4G11230,AT4G00630,AT3G27540,AT5G16280,AT3G01950,AT1G54080,AT1G08970,AT5G52070,AT1G09160,AT4G17880,AT5G22220,AT4G33030,AT3G17530,AT4G34430,AT5G38630,AT3G04430,AT2G33990,AT1G59550,AT3G19030,AT1G32480,AT3G62940,AT1G10470,AT5G02810,AT3G09160,AT3G27430,AT1G66660,AT5G59860,AT2G03050,AT1G02260,AT1G48990,AT1G71900,AT1G48090,AT3G50350,AT4G27530,AT3G52060,AT1G71010,AT5G02070,AT3G03970,AT3G26115,AT4G12490,AT5G03330,AT2G38100,AT1G58030,AT3G18810,AT3G03620,AT2G43520,AT1G50580,AT3G15110,AT3G42560,AT4G09780,AT5G48880,AT4G24390,AT3G48730,AT1G24620,AT4G16050,AT2G41460,AT5G56030,AT3G02060,AT2G20710,AT2G24150,AT5G38580,AT4G18280,AT5G02110,AT2G22920,AT4G26290,AT5G62420,AT2G10440,AT5G64330,AT1G69030,AT1G10560,AT1G74040,AT3G60380,AT5G22710,AT4G12470,AT5G54260,AT1G09770,AT5G06510,AT5G04940,AT5G44530,AT5G62850,AT3G27473,AT4G23380,AT2G21730,AT5G23540,AT1G16490,AT2G24130,AT4G34310,AT4G04920,AT1G79530,AT3G59260,AT1G62000,AT4G30430,AT2G47020,AT5G43080,AT2G28200,AT2G21380,AT1G09390,AT3G29800,AT3G53320,AT2G21900,AT3G01840,AT3G58620,OBSOLETE,AT5G18210,AT1G15125,AT1G26950,AT4G28910,AT4G20100,AT1G55930,AT2G27140,AT5G46920,AT3G25545,AT5G63740,AT2G31470,AT4G33830,AT2G39400,AT2G44660,AT5G14880,AT1G21810,AT4G23850,AT4G02790,AT1G17745,AT5G38710,AT1G35614,AT2G32487,AT4G19110,AT3G27520,AT4G15570,AT5G18290,AT4G00480 GAETA_ALLOPOLYPLOID/PARENT-MIX6400_COMMONVAR_DN Down-regulated genes that were nonadditively expressed in allopolyploid line 1200 relative to the 1:1 parent mix--parentmix_6400_FDR_CommonVar (Dataset S6 PubmedID:19274085) AT5G04470,AT3G22470,AT2G40260,AT3G19040,AT5G63550,AT4G19900,AT3G62430,AT5G41810,AT1G28200,AT3G18040,AT1G21350,AT2G33490,AT1G17070,AT2G40830,AT4G08160,AT2G30960,AT4G17120,AT1G30050,AT5G50870,AT3G57700,AT2G04800,AT4G38620,AT3G54810,AT3G08720,AT2G24350,AT5G16390,AT5G12940,AT5G15790,AT4G27620,AT4G17730,AT5G45370,AT4G35530,AT5G52830,AT2G24920,AT5G54600,AT1G80900,AT4G12930,AT4G32700,AT3G25650,AT2G21780,AT1G12820,AT3G09470,AT5G55290,AT1G53100,AT4G20110,AT3G05165,AT2G20990,AT5G51210,AT1G22882,AT5G27410,AT3G21530,AT3G07210,AT3G52840,AT3G55910,AT4G19620,AT5G27840,AT3G27050,AT3G04390,AT4G16360,AT4G17110,AT1G68500,AT3G14000,AT2G05230,AT5G64750,AT4G30380,AT3G10780,AT1G02880,AT3G04370,AT4G18220,AT3G13510,AT5G56140,AT1G25230,AT1G61730,AT4G27820,AT4G33230,AT1G53940,OBSOLETE,AT4G36280,AT4G09990,AT4G35390,AT1G19250,AT4G30620,AT4G13260,AT5G20070,AT3G49560,AT1G48550,AT4G10540,AT1G10000,AT5G23400,AT4G30260,AT5G14760,AT5G51600,AT1G20823,AT4G02050,AT1G19700,AT5G38140,AT4G16270,AT3G12650,AT5G57840,AT3G62220,AT3G22890,AT4G21140,AT2G06990,AT2G38770,AT3G43800,AT4G32714,AT3G23600,AT5G63910,AT5G08335,AT3G29050,AT1G28120,AT3G49780,AT1G50640,AT5G47990,AT1G63810,AT4G19370,AT4G18540,AT5G03240,AT4G32140,AT5G38650,AT1G48910,AT1G35310,AT3G31300,AT1G21170,AT2G34360,AT5G42640,AT5G62560,AT1G51440,AT2G40960,AT5G01930,AT3G46840,AT3G46820,AT2G36800,AT1G16890,AT1G02800,AT3G56660,AT3G04100,AT1G76310,AT4G27190,AT2G45900,AT4G36210,AT5G22180,AT5G01500,AT3G09170,AT1G23700,AT3G10390,AT1G03490,AT4G04840,AT2G16005,AT5G66950,AT3G18360,AT5G51560,AT5G10700,AT5G47050,AT4G22000,AT1G76880,AT4G18640,AT1G34180,AT3G09020,AT3G11100,AT5G52290,AT5G64000,AT1G68300,AT1G76380,AT1G71490,AT4G12310,AT2G35630,AT2G18840,AT4G32080,AT2G42480,AT5G07150,AT2G28860,AT3G04080,AT4G17505,AT1G05570,AT4G20230,AT5G48020,AT5G16486,AT1G05730,AT3G24190,AT4G10290,AT5G65950,AT4G24510,AT1G29070,AT4G13880,AT1G18070,AT4G12730,AT5G37490,AT2G26390,AT2G33860,AT1G14660,AT2G18720,AT3G19830,AT5G56570,AT5G47910,AT5G44580,AT3G59400,AT2G24040,AT4G27745,AT1G20340,AT4G18030,AT5G57390,AT3G61830,AT1G21050,AT1G64780,AT1G66290,AT3G15970,AT1G19610,AT4G03070,AT1G69020,AT3G13882,AT1G42960,AT2G39050,AT1G74370,AT1G02260,AT3G16120,AT5G48810,AT3G45200,AT1G21245,AT1G28440,AT5G23190,AT4G32260,AT1G14370,AT2G17480,AT3G49940,AT3G57230,AT3G44120,AT5G10090,AT4G20040,AT5G59850,AT1G75100,AT5G07490,AT3G26710,AT5G16920,AT3G16160,AT2G17010,AT1G18530,AT2G04450,AT5G22660,AT4G34680,AT5G43260,AT1G04660,AT4G09880,AT3G08730,AT1G04120,AT3G30180,AT2G14710,AT1G55500,AT2G31945,AT4G17770,AT4G33250,AT4G22790,AT4G12600,AT3G22600,AT5G05010,AT3G57660,AT1G50200,AT2G43350,AT1G36160,AT1G79950,AT5G58860,AT4G38910,AT4G22470,AT2G46610,AT1G70140,AT3G20410,AT1G30950,AT5G10780,AT1G16560,AT4G15955,AT2G25720,AT5G63980,AT5G62880,AT1G28220,AT3G16070,AT5G52910,AT2G41170,AT4G28390,AT1G36050,AT4G39400,AT5G45490,AT4G33520,AT2G18710,AT3G28870,AT3G59760,AT4G02570,AT1G54270,AT2G07770,AT1G30080,AT5G45540,AT1G48175,AT1G50800,AT5G26810,AT2G20710,AT3G27230,AT4G37850,AT4G04480,AT3G27150,AT1G07000,AT1G06230,AT4G04570,AT5G09380,AT4G03190,AT4G19470,AT3G06680,AT4G28260,AT4G30350,AT1G48420,AT5G55510,AT1G16650,AT3G01680,AT3G28650,AT3G50500,AT5G25280,AT5G47290,AT1G02305,AT3G60630,AT3G10680,AT4G23610,AT5G04010,AT5G18040,AT4G27180,AT5G44070,AT4G38210,AT2G30430,AT3G18070,AT3G53070,AT4G27910,AT2G19760,AT3G60540,AT5G14540,AT1G44542,AT5G22530,AT3G01360,AT5G52790,AT1G80540,AT5G54280,AT4G33530,AT3G60720,AT1G21430,AT3G60120,AT5G60100,AT5G02290,AT2G37220,AT3G48550,AT1G04430,AT5G53400,AT2G15390,AT5G66690,AT2G03890,AT4G29610,AT5G47760,AT1G26410,AT2G43530,AT3G06810,AT3G21820,AT1G05850,AT5G20730,AT2G28540,AT2G45190,AT2G21940,AT4G08350,AT5G11270,AT1G15850,AT5G45220,AT5G38440,AT3G20290,AT3G55870,AT3G11680,AT5G13350,AT5G41680,AT5G38970,AT5G63800,AT5G35980,AT5G62820,AT4G29080,AT3G19270,AT4G29370,AT1G66140,AT1G27400,AT1G52470,AT4G25350,AT1G20575,AT1G67170,AT5G10570,AT3G55390,AT4G14680,AT3G49230,AT5G28430,AT4G14455,AT2G42370,AT3G09930,AT2G27150,AT1G65470,AT2G19530,AT3G17600,AT2G46690,AT3G22440,AT4G05080,AT5G43650,AT1G63350,AT3G10770,AT3G02920,AT4G10530,AT1G17130,AT1G69180,AT1G77870,AT5G07910,AT4G33930,AT5G18000,AT5G59560,AT4G17150,AT3G14980,AT1G35570,AT1G15960,AT1G05320,AT5G63050,AT1G75690,AT2G39030,AT5G57460,AT4G02350,AT1G73700,AT5G07370,AT3G14640,AT5G39410,AT2G23840,AT5G15080,AT3G59160,AT2G01940,AT2G17130,AT5G38590,AT3G53260,AT2G10920,AT5G55160,AT4G39470,AT2G26460,AT1G15330,AT1G53750,AT4G37330,AT5G47660,AT3G58130,AT3G45410,AT5G14010,AT3G19990,AT4G13850,AT1G73240,AT2G17750,AT2G20160,AT2G30980,AT5G55930,AT4G33960,AT5G38110,AT1G14020,AT5G34930,AT3G26700,AT5G38130,AT2G34700,AT3G49750,AT3G63440,AT5G67520,AT1G12230,AT5G05890,AT4G20980,AT3G25900,AT5G22060,AT3G45440,AT2G11010,AT3G14650,AT4G39140,AT1G80270,AT1G31050,AT3G47590,AT4G39030,AT3G52430,AT2G37230,AT1G62930,AT3G62960,AT3G26440,AT3G17500,AT5G66830,AT4G18010,AT4G32640,AT5G60590,AT3G49570,AT3G50510,AT5G03280,AT3G12360,AT3G17810,AT4G19730,AT1G08430,AT1G02930,AT3G52540,AT1G02050,AT3G46420,AT1G62340,AT4G17330,AT1G29310,AT4G38600,AT1G50630,AT4G02180,AT2G25730,AT2G27010,AT5G17200,AT5G39930,AT4G09830,AT2G10350,AT5G22500,AT5G05050,AT2G35260,AT4G03540,AT3G24850,AT5G09900,AT5G06020,AT2G21420,AT1G50110,AT3G49950,AT2G42840,AT5G16890,AT4G18610,AT1G56630,AT3G42254,AT4G37660,AT2G11090,AT2G18530,AT4G38480,AT2G34680,AT2G30620,AT5G20990,AT5G13860,AT5G12480,AT3G03380,AT3G62230,AT1G70180,AT2G32290,AT5G42540,AT3G23000,AT3G55890,AT2G38320,AT2G41520,AT3G56460,AT1G04900,AT1G60200,AT3G52770,AT1G31660,AT5G45780,AT3G22090,AT3G27820,AT5G61700,AT2G22690,AT3G08510,AT5G17850,AT2G46830,AT5G48380,AT4G36420,AT3G16670,AT5G10760,AT5G50050,AT5G14870,AT1G04590,AT2G36970,AT4G30490,AT5G57320,AT4G27390,AT2G38350,AT4G11160,AT5G25100,AT4G39860,AT3G13610,AT4G15770,AT4G12030,AT4G01480,AT1G72050,AT1G71740,AT1G66930,AT5G52020,AT5G51980,AT4G31760,AT4G28940,AT2G37990,AT1G36030,AT1G26610,AT5G26860,AT3G57200,AT1G13140,AT4G19690,AT5G01240,AT2G26190,AT1G52370,AT3G46630,AT5G52110,AT5G46170,AT4G36370,AT3G48630,AT4G33170,AT3G23970,AT5G48290,AT3G10810,AT1G06090,AT5G16230,AT4G11450,AT5G41750,AT2G28040,AT1G80840,AT2G20870,AT5G07720,AT1G64060,AT3G24290,AT1G24490,AT5G24410,AT5G58580,AT5G35320,AT1G64150,AT1G77800,AT4G29750,AT3G07660,AT2G27990,AT5G56500,AT5G63280,AT5G05930,AT2G06090,AT4G18160,AT4G22490,AT1G07720,AT5G64090,AT3G13080,AT5G06710,AT3G24540,AT4G04750,AT1G42550,AT2G21030,AT5G53720,AT1G23690,AT3G06500,AT1G78980,AT1G53580,AT2G27330,AT3G11540,AT4G15430,AT4G10300,AT5G10060,AT1G23160,AT1G29090,AT5G44230,AT1G78950,AT3G13710,AT4G03140,AT3G48830,AT1G74200,AT5G64530,AT3G26230,AT4G25540,AT5G66790,AT5G54270,AT1G19000 GAETA_ALLOPOLYPLOID/PARENT-MIX6400_PERGENEVAR_UP Up-regulated genes that were nonadditively expressed in allopolyploid line 1200 relative to the 1:1 parent mix--parentmix_6450_FDR_CommonVar (Dataset S7 PubmedID:19274085) AT1G74860,AT2G21130,AT4G39340,AT5G15860,AT4G16540,AT4G11240,AT4G25310,AT2G45650,AT1G20410,AT5G32621,AT5G03850,AT3G56170,AT3G23210,AT3G44460,AT5G54530,AT3G13250,AT2G10350,AT5G40020,AT3G23600,AT1G69325,AT5G60600,AT4G25280,AT2G41950,AT3G55690,AT5G07980,AT1G22270,AT5G39500,AT2G37430,AT1G71490,AT3G02210,AT3G03490,AT5G39865,AT3G04610,AT4G32380,AT2G18970,AT4G24340,AT3G12620,AT2G32487,AT4G30430,AT1G71040,AT1G62080,AT2G32560,AT2G23910,AT1G56320,AT4G34020,AT5G45780,AT2G21440,AT5G62070,AT4G25730,AT5G57840,AT5G22860,AT5G63490,AT1G07790,AT3G25585,AT3G50920,AT4G29710,AT3G05740,AT2G33540,AT1G80760,AT1G69910,AT1G68370,AT4G11840,AT3G23240,AT5G61690,AT5G37230,AT1G10070,AT1G64430,AT4G09640,AT2G23130,AT2G26850,AT5G24150,AT2G46690,AT1G62930,AT4G35780,AT3G12680,AT4G11640,AT1G10470,AT5G02460,AT2G31960,AT5G52430,AT3G55005,AT2G14610,AT1G52060,AT5G16280,AT3G48150,AT5G20630,AT1G54100,AT1G35210,AT1G49910,AT1G17990,AT3G62840,AT3G05870,AT3G22090,AT2G20210,AT3G30390,AT5G07680,AT1G47230,AT4G14270,AT4G26750,AT4G26160,AT4G24510,AT4G35920,AT4G02440,AT1G47970,AT3G02600,AT5G16450,AT4G03420,AT4G17460,AT4G25170,AT3G14230,AT1G71330,AT5G10880,AT5G01170,AT1G03430,AT5G13310,AT5G41060,AT1G28327,AT1G47730,AT4G15770,AT1G17410,AT2G07320,AT1G14040,AT1G10700,AT3G09310,AT1G18350,AT5G50870,AT3G27420,AT2G38940,AT5G13900,AT1G68310,AT2G17200,AT3G08690,AT4G05590,AT1G44875,AT2G02050,AT1G49810,AT5G60300,AT1G15030,AT4G32430,AT5G13370,AT3G61830,AT3G27540,AT4G27100,AT1G20950,AT3G46190,AT3G46220,AT4G17570,AT4G18190,AT1G10140,AT1G11190,AT1G60640,AT5G67240,AT4G17000,AT1G11630,AT5G47180,AT3G53070,AT4G11050,AT2G30990,AT4G08500,AT5G62620,AT3G03340,AT3G53290,AT5G11080,AT5G16860,AT4G23850,AT2G29690,AT1G10030,AT3G26600,AT3G26920,AT1G78230,AT3G30840,AT3G50570,AT2G42670,AT4G32900,AT5G19450,AT4G12300,AT3G43410,AT1G23320,AT1G06030,AT4G00755,AT3G10680,AT1G48450,AT5G10580,AT3G17750,AT1G34180,AT1G65630,AT5G25890,AT4G30040,AT4G10600,AT1G76490,AT1G06120,AT3G58210,AT2G20450,AT4G02940,AT5G35270,AT3G12880,AT3G24050,AT1G75660,AT4G17370,AT3G01580,AT1G29970,AT1G09470,AT5G64250,AT3G48720,AT3G27473,AT4G19850,AT5G53880,AT1G50260,AT1G44110,AT1G06210,AT1G79430,AT1G68410,AT4G05170,AT2G24240,AT2G41310,AT2G43320,AT5G02570,AT3G45860,AT1G74040,AT1G35650,AT5G25610,AT4G22950,AT5G56900,AT1G18590,AT1G60815,AT3G13340,AT1G72300,AT4G24610,AT5G36030,AT4G21760,AT4G19580,AT2G23030,AT2G10920,AT1G08970,AT1G22290,AT5G39410,AT4G00730,AT3G16100,AT1G70730,AT3G60850,AT4G01350,AT2G16400,AT2G13320,AT2G26150,AT3G14270,AT5G46670,AT5G60230,AT1G06890,AT1G71530,AT5G39750,AT2G37690,AT1G69100,AT4G14300,AT5G05690,AT1G10350,AT1G36160,AT5G44250,AT3G52600,AT3G27480,AT5G17480,AT5G13930,AT1G67430,OBSOLETE,AT4G10760,AT5G57120,AT5G13510,AT3G48160,AT5G51270,AT5G61530,AT2G41380,AT5G65280,AT5G09670,AT5G02810,AT2G38430,AT5G42670,AT2G11090,AT3G54600,AT5G48380,AT2G02760,AT3G50220,AT3G58990,AT3G22421,AT1G64160,AT5G02340,AT5G61950,AT4G27240,AT5G41990,AT2G28820,AT5G49730,AT3G57880,AT3G04740,AT3G57960,AT4G20270,AT5G20960,AT3G50820,AT4G35350,AT1G01200,AT3G57380,AT1G27960,AT1G61290,AT3G27025,AT5G67090,AT5G12050,AT1G22050,AT2G46230,AT1G61950,AT3G18350,AT5G09430,AT3G63310,AT4G33550,AT1G44575,AT4G03340,AT4G14770,AT1G29730,AT2G30020,AT5G47270,AT1G04610,AT4G13630,AT3G25180,AT2G21560,AT4G14020,AT2G29300,AT4G03510,AT3G09450,AT1G04780,AT3G08810,AT4G01610,AT5G57760,AT3G12060,AT3G04430,AT1G22300,AT3G46040,AT1G43040,AT2G22920,AT1G34570,AT5G59460,AT2G26620,AT4G25840,AT5G54430,AT3G07710,AT5G45190,AT5G38580,AT1G18070,AT1G69740,AT1G26800,AT2G03180,AT1G78070,AT2G30810,AT3G17030,AT3G25030,AT5G60700,AT3G63150,AT3G02070,AT5G26130,AT5G57090,AT2G45310,AT4G27040,AT3G43320,AT5G01610,AT5G46100,AT3G44090,AT3G14750,AT5G36880,AT4G19720,AT3G09700,AT4G10290,AT5G61110,AT2G41130,AT4G32460,AT4G00050 GAETA_ALLOPOLYPLOID/PARENT-MIX6400_PERGENEVAR_DN Down-regulated genes that were nonadditively expressed in allopolyploid line 1200 relative to the 1:1 parent mix--parentmix_6450_FDR_CommonVar (Dataset S7 PubmedID:19274085) AT3G29130,AT5G38500,AT1G52990,AT5G36260,AT1G76950,AT2G38280,OBSOLETE,AT1G62770,AT1G15180,AT3G04760,AT5G24020,AT2G37530,AT3G28940,AT5G52530,AT1G78400,AT1G61550,AT4G21790,AT4G29940,AT4G29310,AT4G31310,AT1G29400,AT5G50740,AT4G38620,AT4G15090,AT5G60630,AT1G60790,AT5G05510,AT5G14180,AT5G54560,AT5G50890,AT5G59020,AT4G13190,AT3G26390,AT3G24850,AT5G23190,AT3G61690,AT5G34581,AT1G65470,AT2G36230,AT4G27745,AT5G52370,AT1G49660,AT1G22710,AT5G06870,AT4G24960,AT3G25470,AT3G03510,AT1G78430,AT4G37180,AT3G24315,AT2G26590,AT3G10750,AT2G26880,AT3G11620,AT5G23060,AT1G01310,AT5G67450,AT2G45350,AT3G25150,AT2G30790,AT1G69010,AT3G20380,AT3G25590,AT5G06020,AT1G13340,AT1G27380,AT1G03090,AT1G14120,AT5G57200,AT1G15330,AT1G21240,AT2G02470,AT3G06483,AT1G51810,AT5G05740,AT2G28250,AT2G42480,AT5G38110,AT4G37050,AT4G39370,AT1G51690,AT3G44520,AT4G02360,AT1G53750,AT4G27700,AT4G02570,AT2G34010,AT5G66110,AT1G13710,AT5G67160,AT1G73690,AT2G42570,AT1G66410,AT1G22460,AT2G19910,AT3G10670,AT1G21750,AT3G59160,AT2G31340,AT3G48630,AT4G39410,AT5G46630,AT4G15417,AT1G71150,AT2G36360,AT3G62220,AT2G28060,AT5G15080,AT4G25870,AT5G24880,AT5G03830,AT4G14850,AT1G06110,AT1G01730,AT1G11580,AT4G28430,AT1G04900,AT4G35270,AT3G15590,AT4G27140,AT4G08730,AT4G31690,AT1G72490,AT2G41210,AT1G71210,AT5G60440,AT4G32714,AT3G63200,AT3G60320,AT5G58290,AT5G59710,AT4G30670,AT3G43800,AT5G40030,AT3G27680,AT4G03170,AT4G13500,AT1G37020,AT5G46140,AT4G19690,AT5G03330,AT1G65540,AT3G14650,AT4G37630,AT5G22420,AT2G33990,AT5G09460,AT3G17740,AT3G54340,AT1G25230,AT4G29970,AT5G28760,AT3G23740,AT1G70370,AT2G36970,AT3G17205,AT5G07440,AT1G66180,AT2G42790,AT1G72550,AT5G60740,AT1G08560,AT3G12360,AT4G17330,AT5G54600,AT2G12610,AT2G44370,AT4G38880,AT1G42440,AT4G20460,AT1G48050,AT2G14960,AT2G42210,AT3G25650,AT5G45600,AT3G33530,AT4G22150,AT4G33250,AT4G17020,AT5G53600,AT1G67960,AT1G43650,AT1G14220,AT4G32551,AT1G50630,AT1G75790,AT2G25940,AT5G13750,AT2G30430,AT2G17960,AT5G10020,AT5G25270,AT1G30410,AT3G49950,AT2G43445,AT4G07820,AT5G22160,AT4G22570,AT2G18400,AT5G53970,AT5G35360,AT1G54130,AT3G05250,AT2G07560,AT1G80840,AT3G06670,AT3G21720,AT3G11910,AT4G14103,AT3G20980,AT2G38110,AT4G25350,AT3G62430,AT4G14500,AT4G24150,AT1G52300,AT4G36760,AT3G19300,AT2G01740,AT1G76480,AT1G10090,AT3G42254,AT4G36648,AT2G12100,AT3G10340,AT2G18850,AT3G09730,AT4G19220,AT5G01420,AT5G01500,AT5G55930,AT2G42730,AT3G15220,AT4G19270,AT5G56460,AT1G12064,AT3G25010,AT2G38580,AT1G60410,AT2G25980,AT2G02750,AT3G55910,AT1G51390,AT3G24740,AT5G63230,AT2G38720,AT3G55720,AT4G34620,AT3G12380,AT5G44060,AT4G18800,AT5G24300,AT3G02550,AT4G33200,AT1G60400,AT2G38320,AT3G25900,AT2G36250,AT3G63490,AT3G45770,AT1G56510,AT3G21380,AT4G13020,AT2G20050,AT3G22180,AT2G03480,AT1G56540,AT1G10560,AT1G79860,AT3G45440,AT4G32700,AT4G15430,AT3G60720,AT1G80210,AT1G35310,AT4G31900,AT5G66060,AT5G15790,AT3G01810,AT1G79800,AT3G61880,AT4G39420,AT5G12300,AT5G46740,AT5G58470,AT5G23575,AT5G14220,AT1G10130,AT2G02060,AT4G17080,AT5G36700,AT2G38840,AT4G03630,AT4G32890,AT2G18550,AT1G55940,AT5G41890,AT1G19640,AT1G24330,AT4G17160,AT1G75290,AT4G13650,AT1G01750,AT5G24750,AT1G29090,AT3G48040,AT4G12500,AT4G29910,AT5G57250,AT5G10060,AT4G36360,AT1G61688,AT5G47660,AT3G22160,AT3G03440,AT4G01820,AT3G61390,AT2G47580,AT2G05270,AT3G51100,AT4G14560,AT3G27870,AT1G74930,AT4G32930,AT2G24130,AT3G06150,AT1G23700,AT1G01720,AT1G73280,AT4G16040,AT5G61090,AT2G42160,AT1G44050,AT3G06720,AT3G29635,AT5G15960,AT4G03370,AT2G17750,AT1G35940,AT4G19470,AT5G66190,AT4G00020,AT1G51030,AT1G68120,AT4G08300,AT1G28190,AT1G23690,AT3G08510,AT3G22490,AT3G49570,AT3G49200,AT3G12730,AT2G19940,AT4G33800,AT3G28270,AT1G68850,AT3G14880,AT5G10590,AT2G21030,AT3G19230,AT4G12390,AT4G34600,AT1G13160,AT2G17980,AT5G12940,AT3G24982,AT5G23730,AT1G20360,AT1G20120,AT5G16200,AT2G02980,AT1G35420,AT2G31650,AT4G26190,AT4G15610,AT4G26840,AT1G34510,AT5G47980,AT5G65380,AT2G36040,AT4G16210,AT5G61750,AT5G54270,AT5G35520,AT1G42550 GAETA_ALLOPOLYPLOID/PARENT-MIX6500_COMMONVAR_UP Up-regulated genes that were nonadditively expressed in allopolyploid line 1200 relative to the 1:1 parent mix--parentmix_6450_FDR_PerGeneVar (Dataset S7 PubmedID:19274085) AT1G74860,AT4G39340,AT3G44460,AT5G26130,AT2G39810,AT4G34430,AT1G64890,AT1G50140,AT2G47470,AT5G46340,AT1G10200,AT3G04280,AT3G61240,AT1G15125,AT5G38460,AT1G15060,AT3G18210,AT4G21100,AT3G21720,AT5G27000,AT2G26280,AT1G01420,AT3G01060,AT5G23590,AT3G50590,AT1G30010,AT3G59670,AT3G54750,AT5G16990,AT3G09360,AT1G69230,AT5G38550,AT4G18710,AT3G58220,AT1G79750,AT2G45100,AT5G05480,AT5G40160,AT5G25300,AT1G22420,AT5G48605,AT5G35794,AT2G30010,AT4G11820,AT1G17360,AT5G06330,AT1G65470,AT1G33410,AT4G26220,AT3G05530,AT5G36690,AT1G72790,AT1G08380,AT3G04090,AT3G47730,AT1G67290,AT4G38460,AT2G34630,AT5G39800,AT5G41640,AT3G10150,AT1G69480,AT1G04070,AT1G23850,AT4G33400,AT4G34920,AT1G29240,AT4G29070,AT5G01250,AT5G60880,AT2G35920,AT3G12850,AT4G00700,AT5G45510,AT5G20090,AT2G04900,AT4G13320,AT2G17530,AT4G02770,AT5G63170,AT3G52180,AT5G66550,AT4G37450,AT4G27880,AT4G34000,AT4G27670,AT3G01270,AT1G63140,AT1G74330,AT4G23130,AT4G23690,AT4G34100,AT4G22720,AT5G23100,AT1G24090,AT4G26940,AT2G44560,AT5G02640,AT2G25870,AT4G24670,AT4G03610,AT4G00830,AT5G65250,OBSOLETE,AT5G65010,AT3G44713,AT3G27330,AT5G65530,AT3G19000,AT4G08670,AT3G48560,AT2G17380,AT5G49250,AT1G27760,AT5G07310,AT3G06560,AT3G11940,AT5G65050,AT5G05760,AT5G55920,AT5G08730,AT5G36210,AT1G32190,AT1G73510,AT3G60380,AT1G23410,AT4G13040,AT4G35150,AT5G40510,AT5G45380,AT5G47650,AT1G14160,AT1G09850,AT4G38230,AT5G02740,AT4G37400,AT1G23890,AT3G03830,AT5G39820,AT3G09050,AT1G65680,AT3G61010,AT4G17620,AT4G39640,AT3G17540,AT5G23310,AT2G41780,AT1G19120,AT1G24764,AT5G16410,AT2G28210,AT1G55350,AT3G04970,AT5G22570,AT3G47260,AT3G45680,AT2G43870,AT3G01370,AT3G05110,AT1G62200,AT1G54650,AT2G35910,AT4G29130,AT2G31400,AT3G47630,AT4G25500,AT4G05380,AT5G53780,AT5G10340,AT2G27430,AT5G40830,AT1G09245,AT1G55180,AT5G67110,AT3G19160,AT5G05850,AT1G52660,AT1G52870,AT3G30845,AT1G61840,AT5G51550,AT1G79050,AT1G72520,AT2G30970,AT1G78680,AT5G14070,AT2G31160,AT5G53750,AT1G29410,AT3G19310,AT5G50330,AT4G02050,AT1G22640,AT3G41979,AT2G28450,AT2G29590,AT3G60400,AT5G12840,AT5G07850,AT3G53010,AT2G40600,AT4G04273,AT5G01770,AT1G69490,AT4G27650,AT1G51770,AT3G20910,AT5G04290,AT5G47810,AT4G01460,AT5G54710,AT1G55880,AT2G37070,AT4G09250,AT2G19590,AT3G14380,AT1G68140,AT5G44316,AT2G24630,AT1G19800,AT3G20890,AT5G55770,AT5G02380,AT1G29010,AT5G22270,AT2G27080,AT5G17530,AT2G18050,AT2G41850,AT5G50650,AT2G41670,AT3G59780,AT2G30630,AT5G06150,AT3G01300,AT1G04950,AT2G04795,AT1G80550,AT3G12140,AT5G54870,AT2G40050,AT2G01430,AT4G32760,AT3G06750,AT2G41810,AT5G41360,AT5G17600,AT1G72175,AT5G59090,AT2G44950,AT5G16220,AT1G20795,AT1G19140,AT5G21940,AT3G20820,AT3G09230,AT3G51760,AT1G28060,AT2G41240,AT5G13160,AT4G24300,AT5G12310,AT1G70550,AT2G46620,AT5G43950,AT4G31520,AT5G02180,AT4G37010,AT1G04030,AT5G48180,AT3G24800,AT4G25560,AT3G04040,AT5G42320,AT3G57140,AT4G05210,AT5G16300,AT5G36120,AT3G03540,AT1G79770,AT3G60830,AT4G24790,AT2G20260,AT2G24030,AT1G53760,AT5G15680,AT5G14030,AT2G04270,AT2G30050,AT3G28540,AT3G42390,AT3G13880,AT5G40850,AT4G09020,AT4G14040,AT5G40210,AT3G12890,AT1G41880,AT2G29140,AT2G02340,AT5G14800,AT4G27020,AT1G74090,AT5G16760,AT3G53850,AT2G41300,AT5G20290,AT5G16290,AT3G14940,AT3G14500,AT5G63070,AT5G13090,AT2G36370,AT5G06220,AT4G16320,AT1G04180,AT5G10820,AT2G32720,AT2G42950,AT5G04440,AT3G56860,AT4G17540,AT4G10570,AT1G51530,AT2G38900,AT2G01240,AT4G11460,AT5G10390,AT3G49670,AT3G43790,AT1G02910,AT1G78860,AT1G07360,AT1G61280,AT5G54070,AT3G01460,AT1G26400,AT3G04340,AT5G24350,AT5G38320,AT1G64430,AT5G09240,AT5G45470,AT1G54960,AT5G43310,AT5G04420,AT1G47580,AT1G26130,AT3G26340,AT5G02770,AT1G26220,AT1G54560,AT1G29490,AT2G04430,AT1G74130,AT3G24450,AT3G46150,AT2G42380,AT2G01730,AT1G15770,AT1G12130,AT5G44430,AT1G52700,AT5G45360,AT5G06540,AT5G09500,AT3G23440,AT2G22530,AT5G52750,AT1G73230,AT1G28170,AT3G51580,AT1G49100,AT4G08685,AT5G03810,AT5G26310,AT1G54040,AT5G56650,AT4G01320,AT5G35890,AT5G01210,AT1G13790,AT2G17120,AT4G22165,AT5G38560,AT1G64195,AT2G46380,AT3G11480,AT3G23570,AT3G19550,AT4G31950,AT1G03620,AT1G06140,AT5G44910,AT5G60340,AT1G18150,AT5G51490,AT5G11120,AT5G43060,AT1G75380,AT3G22350,AT4G10490,AT5G42940,AT3G08530,AT5G13640,AT4G38000,AT1G19630,AT5G11420,AT5G17150,AT2G12170,AT3G25190,AT2G15220,AT1G52570,AT2G29420,AT4G17720,AT1G74180,AT5G23890,AT3G01120,AT3G61360,AT3G56750,AT3G28170,AT5G52900,AT2G26970,AT2G20900,AT3G26150,AT1G32790,AT2G43790,AT4G31930,AT2G03380,AT1G30760,AT1G55360,AT5G13470,AT2G16140,AT2G39110,AT4G17260,AT2G15640,AT1G11925,AT2G23760,AT4G31230,AT4G07990,AT5G24490,AT3G24040,AT3G51210,AT5G44850,AT2G37390,AT2G16890,AT5G43110,AT3G14450,AT1G10920,AT5G15100,AT3G29375,AT3G19470,AT5G43470,AT2G32650,AT2G37300,AT2G47450,AT5G28510,AT5G24680,AT5G57030,AT4G11530,AT5G27770,AT4G18920,AT4G03916,AT3G19670,AT3G19750,AT1G31280,AT1G68940,AT3G49370,AT5G03220,AT1G30200,AT5G12320,AT5G53210,AT5G54570,AT2G47430,AT1G75140,AT3G46060,AT2G28990,AT5G57600,AT5G45880,AT2G25540,AT2G28660,AT1G55160,AT3G01570,AT1G66190,AT3G61220,AT3G59190,AT1G74190,AT3G63360,AT4G25820,AT1G01040,AT5G45080,AT4G28610,AT3G43720,AT5G64320,AT5G48610,AT1G79130,AT1G14400,AT5G53000,AT4G17500,AT3G49640,AT5G46470,AT5G14650,AT5G39040,AT3G03130,AT2G19690,AT1G23390,AT1G17460,AT3G20530,AT5G40080,AT1G08630,AT4G32800,AT1G23900,AT5G67380,AT5G58890,AT3G48020,AT3G08890,AT4G28030,AT1G26760,AT4G28640,AT1G06190,AT5G13920,AT2G39970,AT4G34770,AT1G76460,AT3G15530,AT5G58510,AT5G08120,AT1G70600,AT5G60320,AT1G22500,AT3G54560,AT3G05620,AT4G11890,AT3G57390,AT4G26670 GAETA_ALLOPOLYPLOID/PARENT-MIX6500_COMMONVAR_DN Down-regulated genes that were nonadditively expressed in allopolyploid line 1200 relative to the 1:1 parent mix--parentmix_6450_FDR_PerGeneVar (Dataset S7 PubmedID:19274085) AT5G42610,AT2G44930,AT1G11450,AT5G62130,AT5G05070,AT4G12400,AT4G03410,AT5G06950,AT1G69370,AT3G20740,AT5G49210,AT3G45690,AT1G06870,AT3G48970,AT4G20340,AT3G26880,AT5G07270,AT5G12260,AT2G29740,AT4G33600,AT3G21055,AT5G28350,AT5G14900,AT4G00100,AT3G21770,AT5G22400,AT5G38810,AT4G26870,AT2G23140,AT1G29200,AT5G61640,AT5G57880,AT5G23910,AT5G03110,AT1G57580,AT4G30850,AT3G43980,AT2G44060,AT2G45520,AT1G21560,AT1G15750,AT5G17060,AT3G57690,AT5G37440,AT1G36990,AT3G09330,AT2G19210,AT4G24220,AT5G47780,AT3G53900,AT1G68170,AT3G11890,AT1G72430,AT4G27610,AT4G02730,AT2G41280,AT2G24190,AT1G56570,AT1G68070,AT1G44090,AT4G21260,AT4G03550,AT4G11020,AT2G34870,AT1G64640,AT2G24590,AT2G34260,AT4G11280,AT5G41390,AT1G28210,AT2G39550,AT4G08690,AT1G68810,AT2G01660,AT4G24805,AT3G24110,AT1G28570,AT5G46870,AT2G18650,AT5G42920,AT5G55320,AT3G60950,AT2G07170,AT2G28130,AT3G21140,AT3G04840,AT1G66230,AT4G39450,AT2G22730,AT2G30310,AT4G29620,AT2G41700,AT1G10610,AT3G14840,AT5G37530,AT5G59750,AT3G02630,AT2G44230,AT2G01780,AT2G40990,AT2G46030,AT1G77090,AT5G25470,AT2G46590,AT1G08440,AT2G24070,AT5G52130,AT2G18180,AT1G72760,AT1G18950,AT1G14730,AT5G03555,AT1G18610,AT2G20040,AT3G25680,AT4G26330,AT3G62050,AT5G01800,AT3G46500,AT4G29720,AT4G32470,AT1G63130,AT4G01290,AT3G19640,AT1G80120,AT2G13980,AT3G19050,AT5G57870,AT3G45470,AT3G12910,AT5G15380,AT5G53300,AT5G15990,AT1G07440,AT5G51340,AT2G28000,AT3G05880,AT2G46970,AT1G80150,AT1G06170,AT5G53180,AT4G35660,AT5G03730,AT4G28580,AT4G34480,AT5G11390,AT5G62940,AT2G25280,AT3G25020,AT3G42120,AT1G68350,AT3G45390,AT1G20760,AT5G42400,AT3G55610,AT1G02860,AT5G07820,AT4G36140,AT4G28420,AT5G22670,AT5G43340,AT5G38620,AT5G57670,AT1G24230,AT4G23200,AT1G73530,AT3G49960,AT1G21190,AT3G43770,AT3G49760,AT5G14080,AT5G46420,AT4G25200,AT1G01150,AT2G01990,AT1G29040,AT5G02800,AT1G50940,AT1G65010,AT5G58190,AT2G15090,AT3G15420,AT4G09670,AT4G12320,AT3G06590,AT1G33090,AT3G06290,AT3G14070,AT5G11250,AT3G62820,AT4G32610,AT3G57400,AT2G34000,AT5G67480,AT1G22190,AT5G16080,AT5G44110,AT2G20770,AT3G17270,AT5G53320,AT1G65120,AT1G53890,AT3G18535,AT1G43700,AT1G59550,AT1G09157,AT2G15490,AT1G55130,AT1G33610,AT5G06530,AT4G00600,AT1G61120,AT1G07745,AT2G25640,AT3G03400,AT4G10070,AT1G51630,AT1G60470,AT2G01860,AT3G60240,AT4G00860,AT2G30590,AT3G06040,AT4G31530,AT5G48470,AT1G35910,AT4G14530,AT4G35950,AT2G26890,AT1G07840,AT5G02390,AT5G50510,AT3G55440,AT2G24140,AT5G15200,AT4G13470,AT3G12990,AT3G07730,AT3G07525,AT2G44310,AT2G15600,AT1G30690,AT5G02630,AT1G80870,AT5G47240,AT5G46260,AT1G18870,AT5G63130,AT3G27560,AT2G45600,AT1G27340,AT4G16060,AT1G60720,AT3G22870,AT2G30240,AT5G01160,AT2G39220,AT3G60740,AT1G13990,AT1G03110,AT5G42280,AT1G75000,AT1G70040,AT1G15080,AT5G04600,AT4G23250,AT4G13110,AT5G13570,AT4G31610,AT4G39370,AT1G64020,AT4G13880,AT3G48010,AT1G67160,AT4G34330,AT5G46070,AT2G35950,AT3G04830,AT1G15790,AT4G01670,AT4G01330,AT4G27410,AT3G42770,AT4G33100,AT3G26870,AT2G06200,AT5G59680,AT5G11450,AT5G47550,AT4G09060,AT5G57210,AT5G09850,AT4G21770,AT5G55390,AT3G05030,AT4G12960,AT1G19970,AT1G51190,AT5G62180,AT1G64110,AT5G16150,AT1G27020,AT5G64960,AT3G23820,AT4G39240,AT3G48930,AT2G35360,AT5G23490,AT3G09050,AT3G22550,AT4G37540,AT4G21840,AT2G22270,AT1G22110,AT1G55480,AT2G46330,AT2G20820,AT5G02000,AT3G29796,AT4G12580,AT2G30110,AT2G05940,AT5G26570,AT3G54240,AT5G56770,AT1G21960,AT2G25510,AT5G65683,AT3G22050,AT4G37560,AT1G08710,AT4G24420,AT4G16570,AT2G42280,AT1G72010,AT5G15340,AT1G52620,AT5G04490,AT1G72120,AT1G45130,AT5G37650,AT1G54240,AT1G28320,AT5G67510,AT5G49140,AT3G16110,AT3G58120,AT2G37250,AT5G49430,AT2G36210,AT4G14630,AT5G52510,AT4G20440,AT3G04750,AT4G10950,AT4G14370,AT1G76740,AT2G19630,AT4G09300,AT1G66670,AT1G63610,AT3G55800,AT1G79020,AT5G58540,AT1G03940,AT3G27970,AT4G05000,AT5G58510,AT3G48940,AT2G45430,OBSOLETE,AT2G29810,AT4G37810,AT4G31560,AT2G38410,AT3G10820,AT1G64360,AT3G58800,AT4G13330,AT2G28150,AT5G35370,AT1G68830,AT1G27370,AT4G04330,AT3G62280,AT1G35620,AT2G01220,AT2G45900,AT3G43240,AT3G52090,AT5G64430,AT2G14810,AT3G46330,AT5G11360,AT4G11090,AT3G04190,AT3G06660,AT1G32570,AT4G18430,AT1G12890,AT1G03010,AT3G22720,AT1G63830,AT3G13784,AT1G72740,AT1G42970,AT5G64700,AT1G01590,AT5G55020,AT5G34940,AT5G57840,AT1G67035,AT2G32905,AT4G33000,AT5G13960,AT3G22010,AT5G44740,AT5G38660,AT3G03140,AT5G53420,AT2G40300,AT1G54030,AT3G12980,AT2G15730,AT1G07590,AT2G39200,AT2G17480,AT1G04860,AT3G62240,AT5G09520,AT1G50680,AT3G59640,AT1G79640,AT5G60210,AT3G61110,AT4G27720,AT5G02840,AT4G32300,AT2G20300,AT1G71520,AT2G46560,AT3G02580,AT4G00610,AT3G26020,AT1G34140,AT5G08710,AT3G57410,AT5G04040,AT1G70750,AT3G02520,AT1G10880,AT5G17000,AT5G53190,AT3G45150,AT2G07310,AT3G49380,AT4G05330,AT3G51690,AT5G43110,AT4G36000,AT1G51110,AT1G52580,AT4G36890,AT1G65500,AT3G51320,AT5G05680,AT2G41360,AT1G42470,AT1G75820,AT1G30630,AT4G04750,AT1G23950,AT1G31680,AT5G35570,AT3G20980,AT3G51500,AT2G34510,AT2G41870,AT1G12730,AT5G20340,AT5G58350,AT5G66420,AT3G56980,AT2G02620,AT5G17690,AT2G41900,AT5G39940,AT1G10500,AT1G29140,AT2G06700,AT3G02860,AT1G03650,AT4G04630,AT4G29610,AT5G54745,AT4G17760,AT5G22150,AT2G24580,AT2G40340,AT5G56540,AT4G29950,AT1G06690,AT5G65230,AT1G52250,AT3G58170,AT3G60880,AT5G22580,AT1G01470,AT2G23600,AT2G39300,AT2G37800,AT1G62430,AT3G47000,AT3G43570,AT4G36600,AT1G43760,AT4G27500,AT1G21170,AT1G77310,AT1G80520,AT1G74670,AT3G50590,AT5G22700,AT1G11920,AT5G53440,AT1G30740,AT2G04620,AT5G02600,AT1G63990,AT2G22540,AT3G49160,AT5G08250,AT5G14860,AT5G36035,AT2G28160,AT1G71080,AT5G65160,AT1G76020,AT1G73870,AT4G18260,AT3G61090,AT4G28050,AT1G26910,AT4G26520,AT1G50750,AT4G28703,AT3G20230,AT2G23110,AT1G49560,AT1G29700,AT2G05810,AT5G01280,AT1G51370,AT1G01810,AT5G67080,AT4G16140,AT4G38040,AT3G55190,AT1G51360,AT1G80180,AT5G27640,AT5G08560,AT5G03820,AT2G42470,AT2G31900,AT1G67670,AT5G14930,AT5G24240,AT3G03680,AT1G55810,AT5G64670,AT3G27240,AT1G54450,AT1G08315,AT3G06130,AT5G54890,AT1G27360,AT1G11690,AT5G65490,AT1G49475,AT4G05540,AT2G18710,AT1G27910,AT2G17570,AT2G17620,AT4G16840,AT2G04790,AT2G21630,AT2G42840,AT3G18670,AT2G18840,AT5G41670,AT3G24540,AT3G25470,AT3G48630,AT3G14650,AT4G32551,AT2G17750,AT1G35940,AT5G54270,AT1G42550 GAETA_ALLOPOLYPLOID/PARENT-MIX6450_PERGENEVAR_UP 252 parental genes expressed at higher level in Eil-0 than in Lc-0 (11 interrogated by 2 probes, 1 interrogated by 3 probes); (Table S2 PubmedID:19225455) AT1G02850,AT1G07310,AT1G10550,AT1G12220,AT1G12230,AT1G12805,AT1G13650,AT1G13750,AT1G14120,AT1G16390,AT1G16420,AT1G17240,AT1G17590,AT1G19540,AT1G19570,AT1G19610,AT1G19920,AT1G20350,AT1G20400,AT1G20630,AT1G21270,AT1G21520,AT1G21525,AT1G22090,AT1G22650,AT1G22980,AT1G23110,AT1G24240,AT1G29355,AT1G31335,AT1G31885,AT1G33960,AT1G35560,AT1G37130,AT1G45000,AT1G45015,AT1G51340,AT1G51965,AT1G52720,AT1G53450,AT1G53790,AT1G54050,AT1G55310,AT1G56300,AT1G58150,AT1G58320,AT1G59900,AT1G61667,AT1G61800,AT1G61980,AT1G62380,AT1G62500,AT1G62690,AT1G62790,AT1G63540,AT1G64100,AT1G65680,AT1G65730,AT1G65980,AT1G65985,AT1G66540,AT1G66910,AT1G67000,AT1G67100,AT1G69720,AT1G71340,AT1G72930,AT1G73010,AT1G74640,AT1G75280,AT1G75830,AT1G76470,AT1G76650,AT1G76960,AT1G78320,AT1G78450,AT1G79650,AT2G01090,AT2G01430,AT2G03505,AT2G03770,AT2G04110,AT2G04800,AT2G05710,AT2G05715,AT2G06025,AT2G10750,AT2G16005,AT2G16140,AT2G16790,AT2G18460,AT2G18710,AT2G19310,AT2G19970,AT2G19990,AT2G21130,AT2G21830,AT2G21850,AT2G21860,AT2G21870,AT2G22780,AT2G23790,AT2G24690,AT2G24750,AT2G25350,AT2G25470,AT2G26440,AT2G29000,AT2G30480,AT2G32550,AT2G34210,AT2G35010,AT2G35350,AT2G35820,AT2G36550,AT2G36750,AT2G40010,AT2G41340,AT2G41650,AT2G43510,AT2G43540,AT2G47510,AT2G47720,AT3G02550,AT3G02690,AT3G06110,AT3G06145,AT3G06435,AT3G06730,AT3G07580,AT3G08940,AT3G10150,AT3G11402,AT3G11930,AT3G21720,AT3G22940,AT3G23120,AT3G24506,AT3G24927,AT3G26210,AT3G26480,AT3G27520,AT3G27770,AT3G28320,AT3G28540,AT3G29130,AT3G29290,AT3G32930,AT3G32940,AT3G43740,AT3G45860,AT3G46540,AT3G47480,AT3G48235,AT3G48640,AT3G49160,AT3G53260,AT3G57260,AT3G57470,AT3G58220,AT3G58270,AT3G59200,AT3G59900,AT3G60300,AT3G61010,AT3G62530,AT3G63280,AT4G00970,AT4G01270,AT4G02520,AT4G02850,AT4G03050,AT4G03510,AT4G03540,AT4G08950,AT4G09360,AT4G10265,AT4G10270,AT4G11410,AT4G13030,AT4G13630,AT4G14905,AT4G14980,AT4G15210,AT4G15910,AT4G16770,AT4G17970,AT4G19730,AT4G21680,AT4G21860,AT4G21870,AT4G22280,AT4G23130,AT4G23220,AT4G23250,AT4G23290,AT4G25710,AT4G27450,AT4G33355,AT4G33550,AT4G33910,AT4G37410,AT4G39210,AT4G39460,AT4G39960,AT5G01590,AT5G02370,AT5G03350,AT5G03455,AT5G05930,AT5G10380,AT5G10760,AT5G14650,AT5G15030,AT5G17780,AT5G17870,AT5G17880,AT5G17890,AT5G20790,AT5G21105,AT5G24200,AT5G24655,AT5G25920,AT5G34850,AT5G37980,AT5G38030,AT5G38565,AT5G38900,AT5G39030,AT5G39890,AT5G40060,AT5G42250,AT5G42890,AT5G43450,AT5G43460,AT5G43580,AT5G44740,AT5G45670,AT5G46110,AT5G47980,AT5G48020,AT5G50100,AT5G52540,AT5G53970,AT5G54170,AT5G58300,AT5G62980,AT5G63020,AT5G63030,AT5G63760,AT5G64000,AT5G64120 GAETA_ALLOPOLYPLOID/PARENT-MIX6450_PERGENEVAR_DN 228 parental genes expressed at lower level in Eil-0 than in Lc-0 (6 interrogated by 2 probes); (Table S2 PubmedID:19225455) AT1G02205,AT1G02340,AT1G02770,AT1G05830,AT1G15380,AT1G17190,AT1G18710,AT1G20680,AT1G22590,AT1G23050,AT1G23390,AT1G23400,AT1G23935,AT1G25380,AT1G26250,AT1G27190,AT1G27570,AT1G29030,AT1G31200,AT1G33040,AT1G33480,AT1G47420,AT1G49860,AT1G51280,AT1G51805,AT1G51990,AT1G52000,AT1G52400,AT1G52410,AT1G52710,AT1G54040,AT1G56510,AT1G58410,AT1G60190,AT1G60530,AT1G60750,AT1G62420,AT1G62540,AT1G63800,AT1G63900,AT1G63910,AT1G65220,AT1G65690,AT1G66920,AT1G66930,AT1G67470,AT1G67700,AT1G69430,AT1G69480,AT1G69900,AT1G72860,AT1G73220,AT1G73530,AT1G73760,AT1G74055,AT1G74450,AT1G75680,AT1G79000,AT1G80160,AT1G80480,AT2G02790,AT2G02795,AT2G03750,AT2G05915,AT2G07783,AT2G10900,AT2G10940,AT2G11150,AT2G11240,AT2G11270,AT2G13810,AT2G15790,AT2G17650,AT2G18193,AT2G19060,AT2G20340,AT2G20360,AT2G20390,AT2G20610,AT2G22600,AT2G24080,AT2G24160,AT2G24600,AT2G24710,AT2G24760,AT2G24940,AT2G25450,AT2G26820,AT2G27385,AT2G28270,AT2G28850,AT2G28860,AT2G30140,AT2G30230,AT2G30830,AT2G34430,AT2G34840,AT2G36870,AT2G38140,AT2G40460,AT2G40910,AT2G41480,AT2G42060,AT2G42530,AT2G43550,AT2G43670,AT2G44380,AT2G45150,AT2G46450,AT2G46455,AT3G01345,AT3G02140,AT3G05210,AT3G10610,AT3G15630,AT3G16140,AT3G17840,AT3G18070,AT3G19515,AT3G21700,AT3G23080,AT3G24300,AT3G26070,AT3G27250,AT3G27350,AT3G28220,AT3G28270,AT3G28730,AT3G44430,AT3G44450,AT3G44716,AT3G44940,AT3G46010,AT3G46490,AT3G46650,AT3G47290,AT3G47340,AT3G48690,AT3G49780,AT3G50020,AT3G51330,AT3G56130,AT4G00160,AT4G00650,AT4G00955,AT4G00980,AT4G02280,AT4G03060,AT4G04700,AT4G04840,AT4G05020,AT4G07410,AT4G07825,AT4G08870,AT4G09680,AT4G10310,AT4G10570,AT4G11070,AT4G11460,AT4G11900,AT4G12060,AT4G12170,AT4G14100,AT4G15300,AT4G15440,AT4G16990,AT4G18370,AT4G18650,AT4G20480,AT4G21140,AT4G22390,AT4G24420,AT4G27410,AT4G29990,AT4G30110,AT4G31650,AT4G36670,AT4G38070,AT5G01510,AT5G03390,AT5G08370,AT5G10390,AT5G10740,AT5G14830,AT5G19700,AT5G19950,AT5G20450,AT5G22880,AT5G23405,AT5G23420,AT5G23570,AT5G23660,AT5G24420,AT5G26680,AT5G26860,AT5G33370,AT5G36740,AT5G36910,AT5G37130,AT5G42850,AT5G43120,AT5G43430,AT5G43780,AT5G44110,AT5G44750,AT5G45070,AT5G45080,AT5G45090,AT5G46290,AT5G47450,AT5G47800,AT5G48070,AT5G48110,AT5G49150,AT5G53150,AT5G57685,AT5G58590,AT5G59220,AT5G59890,AT5G60760,AT5G63180,AT5G63580,AT5G64050,AT5G65980,AT5G66800,AT5G67090,AT5G67370,AT5G36670 STAVANG_WT_29C/20C_UP Up-regulated-WT-temperature(Sample 29?C / Sample 20?C) (Table S1 PubmedID:19686536) AT5G45340,AT5G49210,AT2G29500,AT1G74310,AT3G24500,AT3G12580,AT4G12400,AT1G29420,AT1G54050,AT4G18425,AT3G47340,AT2G43010,AT5G39100,AT5G15830,AT3G14200,AT1G18330,AT5G18050,AT5G02810,AT5G44635,AT1G19530,AT3G53230,AT1G29460,AT3G58930,AT3G15540,AT3G16050,AT2G21820,AT5G18060,AT4G27450,AT2G19310,AT5G51540,AT5G15860,AT3G03820,AT5G67380,AT5G06980,AT2G30550,AT5G16360,AT3G12050,AT1G29490,AT5G12110,AT1G26800,AT3G10020,AT1G33055,AT5G55480,AT1G29430,AT3G03310,AT2G15050,AT5G22770,AT4G10330,AT2G32190,AT3G17790,AT3G50560,AT2G29450,AT3G07090,AT2G31980,AT5G12050,AT2G04030,AT1G04980,AT3G22790,AT1G05340,AT4G14270,AT3G57880,AT5G22860,AT1G13600,AT2G43670,AT2G42040,AT2G37060,AT1G14520,AT3G62860,AT5G63040,AT1G67360,AT5G51030,AT5G54750,AT1G56170,AT5G02580,AT5G04160,AT1G77480,AT1G30500,AT4G33550,AT5G09590,AT5G38430,AT4G16780,AT2G43020,AT1G01470,AT4G04620,AT5G38420,AT5G58060,AT1G48320,AT1G47960,AT1G53560,AT4G30390,AT5G22730,AT4G13830,AT4G14385,AT3G47510,AT5G22290,AT4G24190,AT5G02020,AT3G01100,AT3G61060,AT1G11380 STAVANG_WT_29C/20C_DN Down-regulated-WT-temperature(Sample 29?C / Sample 20?C) (Table S1 PubmedID:19686536) AT1G78450,AT3G20820,AT1G03060,AT1G17170,AT3G52390,AT1G02930,AT1G48850,AT5G05270,AT3G44450,AT2G37450,AT1G21100,AT2G30750,AT5G16770,AT2G31900 DEEKEN_AGROBACTERIUM-TUMEFACIENS_TUMORS_UP Up-regulated in Agrobacterium tumefaciens-induced tumors of Arabidopsis thaliana. (Table S1 PubmedID:17172353) AT1G01010,AT1G01060,AT1G01100,AT1G01225,AT1G01300,AT1G01370,AT1G01480,AT1G01510,AT1G01620,AT1G01730,AT1G01800,AT1G01900,AT1G02080,AT1G02110,AT1G02220,AT1G02330,AT1G02360,AT1G02520,AT1G02530,AT1G02640,AT1G02690,AT1G02730,AT1G02780,AT1G02840,AT1G02850,AT1G02870,AT1G02900,AT1G02920,AT1G02930,AT1G02950,AT1G03090,AT1G03110,AT1G03220,AT1G03230,AT1G03330,AT1G03457,AT1G03590,AT1G03610,AT1G03620,AT1G03780,AT1G03850,AT1G03905,AT1G04020,AT1G04250,AT1G04260,AT1G04270,AT1G04310,AT1G04410,AT1G04510,AT1G04660,AT1G04730,AT1G04750,AT1G04820,AT1G04850,AT1G04870,AT1G05205,AT1G05210,AT1G05260,AT1G05310,AT1G05370,AT1G05710,AT1G05760,AT1G05770,AT1G06090,AT1G06120,AT1G06180,AT1G06390,AT1G06450,AT1G06490,AT1G06550,AT1G06590,AT1G06630,AT1G06670,AT1G06840,AT1G06900,AT1G06960,AT1G07020,AT1G07070,AT1G07170,AT1G07370,AT1G07470,AT1G07480,AT1G07570,AT1G07620,AT1G07770,AT1G07830,AT1G07880,AT1G08050,AT1G08080,AT1G08260,AT1G08360,AT1G08560,AT1G08650,AT1G08750,AT1G08970,AT1G09200,AT1G09390,AT1G09460,AT1G09560,AT1G09570,AT1G09575,AT1G09590,AT1G09630,AT1G09690,AT1G09760,AT1G09780,AT1G09840,AT1G09960,AT1G09970,AT1G09980,AT1G10140,AT1G10180,AT1G10460,AT1G10540,AT1G10550,AT1G10570,AT1G10630,AT1G10670,AT1G10700,AT1G10750,AT1G10780,AT1G10850,AT1G10950,AT1G10990,AT1G11090,AT1G11130,AT1G11240,AT1G11390,AT1G11400,AT1G11545,AT1G11570,AT1G11580,AT1G11670,AT1G11680,AT1G11790,AT1G12000,AT1G12020,AT1G12070,AT1G12310,AT1G12500,AT1G12780,AT1G12910,AT1G12950,AT1G13180,AT1G13340,AT1G13380,AT1G13570,AT1G13730,AT1G13920,AT1G13980,AT1G14040,AT1G14180,AT1G14210,AT1G14240,AT1G14260,AT1G14290,AT1G14320,AT1G14510,AT1G14620,AT1G14730,AT1G14810,AT1G14850,AT1G14870,AT1G14880,AT1G14890,AT1G14900,AT1G14910,AT1G15040,AT1G15210,AT1G15430,AT1G15520,AT1G15570,AT1G15580,AT1G15660,AT1G15690,AT1G15750,AT1G15930,AT1G16340,AT1G16490,AT1G16510,AT1G16520,AT1G16530,AT1G16920,AT1G17170,AT1G17345,AT1G17350,AT1G17830,AT1G17880,AT1G17890,AT1G18080,AT1G18100,AT1G18250,AT1G18370,AT1G18450,AT1G18480,AT1G18540,AT1G18620,AT1G18640,AT1G18670,AT1G18840,AT1G18890,AT1G18980,AT1G19050,AT1G19230,AT1G19330,AT1G19360,AT1G19525,AT1G19530,AT1G19710,AT1G19835,AT1G19850,AT1G19880,AT1G19950,AT1G20050,AT1G20200,AT1G20410,AT1G20430,AT1G20570,AT1G20700,AT1G20770,AT1G20850,AT1G20870,AT1G20930,AT1G20950,AT1G21100,AT1G21110,AT1G21130,AT1G21310,AT1G21525,AT1G21700,AT1G21720,AT1G21750,AT1G21880,AT1G21980,AT1G22180,AT1G22440,AT1G22450,AT1G22780,AT1G22800,AT1G22840,AT1G23190,AT1G23290,AT1G23390,AT1G23410,AT1G23460,AT1G23470,AT1G23480,AT1G23560,AT1G23750,AT1G23870,AT1G23880,AT1G24050,AT1G24180,AT1G24280,AT1G24310,AT1G24360,AT1G24430,AT1G24440,AT1G24625,AT1G25260,AT1G25280,AT1G25320,AT1G25400,AT1G25510,AT1G25530,AT1G25570,AT1G26100,AT1G26190,AT1G26240,AT1G26250,AT1G26260,AT1G26270,AT1G26380,AT1G26450,AT1G26730,AT1G26770,AT1G26840,AT1G26880,AT1G26910,AT1G26930,AT1G27400,AT1G27450,AT1G27610,AT1G27620,AT1G28110,AT1G28130,AT1G28290,AT1G28390,AT1G28395,AT1G28410,AT1G28440,AT1G28510,AT1G29160,AT1G29195,AT1G29310,AT1G29350,AT1G29520,AT1G29860,AT1G29980,AT1G30000,AT1G30080,AT1G30100,AT1G30400,AT1G30440,AT1G30490,AT1G30570,AT1G30620,AT1G30630,AT1G30700,AT1G30720,AT1G30730,AT1G30740,AT1G30820,AT1G31280,AT1G31290,AT1G31320,AT1G31460,AT1G31470,AT1G31660,AT1G31780,AT1G31860,AT1G31880,AT1G32090,AT1G32170,AT1G32190,AT1G32210,AT1G32310,AT1G33055,AT1G33420,AT1G33440,AT1G33590,AT1G33680,AT1G33700,AT1G33790,AT1G34030,AT1G34130,AT1G34300,AT1G34630,AT1G34670,AT1G34770,AT1G35140,AT1G35230,AT1G35260,AT1G35580,AT1G35780,AT1G36050,AT1G36060,AT1G41830,AT1G43170,AT1G43790,AT1G43800,AT1G43910,AT1G44110,AT1G44170,AT1G44900,AT1G44970,AT1G45000,AT1G46264,AT1G47210,AT1G47270,AT1G47380,AT1G47410,AT1G47480,AT1G47670,AT1G47740,AT1G48280,AT1G48320,AT1G48480,AT1G48510,AT1G48630,AT1G48850,AT1G48860,AT1G48950,AT1G49580,AT1G49600,AT1G50010,AT1G50240,AT1G50490,AT1G50500,AT1G50570,AT1G50575,AT1G51420,AT1G51600,AT1G51640,AT1G51650,AT1G51940,AT1G52140,AT1G52300,AT1G52340,AT1G52760,AT1G52930,AT1G52980,AT1G53000,AT1G53050,AT1G53180,AT1G53310,AT1G53440,AT1G53490,AT1G53645,AT1G53660,AT1G53850,AT1G53920,AT1G54000,AT1G54010,AT1G54030,AT1G54140,AT1G54200,AT1G54450,AT1G54540,AT1G54610,AT1G54790,AT1G54960,AT1G55020,AT1G55180,AT1G55610,AT1G55690,AT1G55840,AT1G55900,AT1G55940,AT1G56080,AT1G56110,AT1G56145,AT1G56150,AT1G56210,AT1G56320,AT1G57560,AT1G57630,AT1G57660,AT1G57700,AT1G57860,AT1G57870,AT1G58025,AT1G58350,AT1G58470,AT1G59500,AT1G59710,AT1G59740,AT1G59960,AT1G60030,AT1G60140,AT1G60390,AT1G60680,AT1G60690,AT1G60710,AT1G60730,AT1G60740,AT1G60800,AT1G60890,AT1G61010,AT1G61360,AT1G61370,AT1G61550,AT1G61690,AT1G61770,AT1G62045,AT1G62290,AT1G62300,AT1G62420,AT1G62520,AT1G62770,AT1G62790,AT1G62870,AT1G63020,AT1G63160,AT1G63180,AT1G63220,AT1G63290,AT1G63310,AT1G63420,AT1G63440,AT1G63460,AT1G63470,AT1G63480,AT1G63640,AT1G63660,AT1G63720,AT1G63940,AT1G64060,AT1G64090,AT1G64160,AT1G64190,AT1G64405,AT1G64450,AT1G64460,AT1G64520,AT1G64530,AT1G64550,AT1G64590,AT1G64660,AT1G64790,AT1G64880,AT1G65290,AT1G65310,AT1G65650,AT1G65690,AT1G65930,AT1G65970,AT1G66270,AT1G66280,AT1G66480,AT1G66530,AT1G66570,AT1G66580,AT1G66680,AT1G66690,AT1G66700,AT1G66810,AT1G66880,AT1G67000,AT1G67050,AT1G67140,AT1G67320,AT1G67430,AT1G67630,AT1G67650,AT1G67680,AT1G67830,AT1G67930,AT1G67950,AT1G68060,AT1G68100,AT1G68230,AT1G68320,AT1G68330,AT1G68360,AT1G68400,AT1G68470,AT1G68620,AT1G68630,AT1G68840,AT1G68850,AT1G68940,AT1G69220,AT1G69310,AT1G69420,AT1G69530,AT1G69620,AT1G69700,AT1G69770,AT1G69780,AT1G69810,AT1G69880,AT1G69920,AT1G69930,AT1G70170,AT1G70280,AT1G70470,AT1G70500,AT1G70600,AT1G70660,AT1G70690,AT1G70710,AT1G70850,AT1G71020,AT1G71100,AT1G71140,AT1G71380,AT1G71695,AT1G71697,AT1G71730,AT1G71830,AT1G71930,AT1G72140,AT1G72250,AT1G72370,AT1G72630,AT1G72670,AT1G72680,AT1G72700,AT1G72730,AT1G72790,AT1G73250,AT1G73260,AT1G73270,AT1G73370,AT1G73640,AT1G73730,AT1G74000,AT1G74010,AT1G74020,AT1G74030,AT1G74050,AT1G74055,AT1G74060,AT1G74460,AT1G74590,AT1G74670,AT1G74740,AT1G74790,AT1G74890,AT1G75090,AT1G75200,AT1G75330,AT1G75450,AT1G75490,AT1G75990,AT1G76070,AT1G76090,AT1G76140,AT1G76160,AT1G76260,AT1G76310,AT1G76400,AT1G76405,AT1G76410,AT1G76470,AT1G76540,AT1G76550,AT1G76600,AT1G76660,AT1G76710,AT1G76740,AT1G76780,AT1G76790,AT1G76930,AT1G77120,AT1G77170,AT1G77590,AT1G77670,AT1G77700,AT1G77720,AT1G77750,AT1G77840,AT1G77940,AT1G78040,AT1G78050,AT1G78060,AT1G78120,AT1G78410,AT1G78610,AT1G78770,AT1G78820,AT1G78830,AT1G78850,AT1G78860,AT1G79140,AT1G79180,AT1G79210,AT1G79280,AT1G79420,AT1G79450,AT1G79500,AT1G79530,AT1G79680,AT1G79690,AT1G79820,AT1G79950,AT1G79990,AT1G80110,AT1G80260,AT1G80280,AT1G80350,AT1G80460,AT1G80530,AT1G80590,AT1G80640,AT1G80660,AT1G80730,AT1G80820,AT1G80850,AT2G01120,AT2G01140,AT2G01210,AT2G01250,AT2G01430,AT2G01520,AT2G02000,AT2G02010,AT2G02100,AT2G02120,AT2G02130,AT2G02170,AT2G02220,AT2G02850,AT2G02930,AT2G03280,AT2G04090,AT2G04100,AT2G04650,AT2G04780,AT2G05220,AT2G05440,AT2G05510,AT2G05790,AT2G06510,AT2G06850,AT2G07170,AT2G07690,AT2G09990,AT2G11620,AT2G13820,AT2G14100,AT2G14670,AT2G14890,AT2G14900,AT2G15120,AT2G15220,AT2G15400,AT2G15430,AT2G15480,AT2G15490,AT2G15760,AT2G15880,AT2G16060,AT2G16270,AT2G16390,AT2G16440,AT2G16580,AT2G16600,AT2G16660,AT2G16700,AT2G16780,AT2G16790,AT2G16800,AT2G16850,AT2G17370,AT2G17630,AT2G17720,AT2G17770,AT2G17820,AT2G17850,AT2G17940,AT2G18020,AT2G18060,AT2G18140,AT2G18150,AT2G18360,AT2G18370,AT2G18390,AT2G18400,AT2G18500,AT2G18550,AT2G18590,AT2G18690,AT2G18700,AT2G19590,AT2G19730,AT2G19800,AT2G19930,AT2G19970,AT2G20300,AT2G20360,AT2G21030,AT2G21060,AT2G21100,AT2G21390,AT2G21580,AT2G21790,AT2G21800,AT2G22250,AT2G22310,AT2G22420,AT2G22510,AT2G22610,AT2G22620,AT2G22770,AT2G23050,AT2G23170,AT2G23210,AT2G23320,AT2G23380,AT2G23540,AT2G23700,AT2G24010,AT2G24100,AT2G24170,AT2G24430,AT2G24490,AT2G24850,AT2G24970,AT2G25060,AT2G25210,AT2G25270,AT2G25880,AT2G26070,AT2G26290,AT2G26300,AT2G26400,AT2G26560,AT2G26650,AT2G26700,AT2G26710,AT2G26760,AT2G27000,AT2G27040,AT2G27060,AT2G27130,AT2G27140,AT2G27310,AT2G27530,AT2G27590,AT2G27710,AT2G27720,AT2G28210,AT2G28260,AT2G28570,AT2G28660,AT2G28690,AT2G28790,AT2G28950,AT2G29050,AT2G29210,AT2G29440,AT2G29460,AT2G29470,AT2G29480,AT2G29490,AT2G29550,AT2G29570,AT2G29890,AT2G29980,AT2G30150,AT2G30210,AT2G30500,AT2G30750,AT2G30770,AT2G30980,AT2G31160,AT2G31180,AT2G31270,AT2G31360,AT2G31390,AT2G31410,AT2G31610,AT2G31730,AT2G20570,AT2G32060,AT2G32100,AT2G32280,AT2G32380,AT2G32590,AT2G33330,AT2G33860,AT2G34060,AT2G34140,AT2G34300,AT2G34390,AT2G34480,AT2G34650,AT2G34670,AT2G34710,AT2G35110,AT2G35120,AT2G35190,AT2G35930,AT2G35980,AT2G36080,AT2G36090,AT2G36160,AT2G36170,AT2G36200,AT2G36220,AT2G36530,AT2G36620,AT2G36890,AT2G36910,AT2G36930,AT2G37120,AT2G37190,AT2G37270,AT2G37280,AT2G37590,AT2G37750,AT2G38250,AT2G38370,AT2G38380,AT2G38390,AT2G38530,AT2G38620,AT2G38810,AT2G38860,AT2G39220,AT2G39310,AT2G39350,AT2G39390,AT2G39410,AT2G39660,AT2G39870,AT2G40260,AT2G40370,AT2G40480,AT2G40530,AT2G40540,AT2G40550,AT2G40610,AT2G40765,AT2G40890,AT2G40940,AT2G40960,AT2G41070,AT2G41110,AT2G41230,AT2G41500,AT2G41510,AT2G41520,AT2G41540,AT2G41550,AT2G41650,AT2G41660,AT2G41690,AT2G41780,AT2G41810,AT2G41840,AT2G42210,AT2G42290,AT2G42310,AT2G42570,AT2G42580,AT2G42620,AT2G42740,AT2G43000,AT2G43140,AT2G43150,AT2G43360,AT2G43390,AT2G43420,AT2G43460,AT2G43535,AT2G43590,AT2G43610,AT2G43670,AT2G44040,AT2G44065,AT2G44070,AT2G44080,AT2G44120,AT2G44130,AT2G44150,AT2G44260,AT2G44370,AT2G44790,AT2G44830,AT2G45200,AT2G45290,AT2G45300,AT2G45340,AT2G45420,AT2G45470,AT2G45490,AT2G46140,AT2G46200,AT2G46230,AT2G46500,AT2G46590,AT2G46710,AT2G46750,AT2G46800,AT2G46900,AT2G46920,AT2G46930,AT2G47000,AT2G47115,AT2G47200,AT2G47260,AT2G47270,AT2G47520,AT2G47550,AT2G47610,AT2G47630,AT2G47650,AT2G47690,AT2G47720,AT2G47730,AT2G47780,AT2G47840,AT2G47860,AT2G47950,AT2G47960,AT2G48130,AT2G48140,AT3G01160,AT3G01175,AT3G01280,AT3G01680,AT3G01790,AT3G01970,AT3G02080,AT3G02120,AT3G02180,AT3G02200,AT3G02230,AT3G02360,AT3G02420,AT3G02550,AT3G02555,AT3G02560,AT3G02640,AT3G02780,AT3G02790,AT3G02800,AT3G02820,AT3G02885,AT3G02900,AT3G02910,AT3G02920,AT3G02940,AT3G02990,AT3G03050,AT3G03130,AT3G03170,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AT4G05090,AT4G05190,AT4G05520,AT4G07410,AT4G08160,AT4G08690,AT4G08770,AT4G08780,AT4G08950,AT4G08980,AT4G09030,AT4G09420,AT4G09460,AT4G09510,AT4G09800,AT4G10260,AT4G10270,AT4G10450,AT4G10480,AT4G10610,AT4G10890,AT4G11010,AT4G11080,AT4G11170,AT4G11420,AT4G11450,AT4G11470,AT4G11480,AT4G11530,AT4G11650,AT4G12250,AT4G12390,AT4G12420,AT4G12730,AT4G13195,AT4G13210,AT4G13235,AT4G13660,AT4G13940,AT4G14060,AT4G14110,AT4G14200,AT4G14320,AT4G14330,AT4G14350,AT4G14420,AT4G14465,AT4G14630,AT4G14660,AT4G14720,AT4G14840,AT4G14900,AT4G14930,AT4G14960,AT4G15000,AT4G15120,AT4G15830,AT4G15900,AT4G15910,AT4G16120,AT4G16130,AT4G16155,AT4G16215,AT4G16250,AT4G16480,AT4G16610,AT4G16720,AT4G16800,AT4G17190,AT4G17215,AT4G17240,AT4G17260,AT4G17270,AT4G17390,AT4G17486,AT4G17800,AT4G17980,AT4G18100,AT4G18340,AT4G18465,AT4G18710,AT4G18890,AT4G18910,AT4G19185,AT4G19410,AT4G19810,AT4G20050,AT4G20270,AT4G20280,AT4G20320,AT4G20390,AT4G20430,AT4G20460,AT4G20720,AT4G20840,AT4G21110,AT4G21270,AT4G21450,AT4G21680,AT4G21780,AT4G21830,AT4G21840,AT4G21865,AT4G22050,AT4G22130,AT4G22150,AT4G22212,AT4G22530,AT4G22590,AT4G22610,AT4G22730,AT4G22770,AT4G22930,AT4G23190,AT4G23410,AT4G23420,AT4G23430,AT4G23440,AT4G23510,AT4G23515,AT4G23650,AT4G23680,AT4G23690,AT4G23720,AT4G23750,AT4G23800,AT4G23820,AT4G24040,AT4G24110,AT4G24130,AT4G24140,AT4G24330,AT4G24430,AT4G24610,AT4G24780,AT4G24820,AT4G24860,AT4G25500,AT4G25630,AT4G25720,AT4G25730,AT4G25810,AT4G25835,AT4G26120,AT4G26210,AT4G26220,AT4G26230,AT4G26260,AT4G26400,AT4G26610,AT4G26650,AT4G26660,AT4G26760,AT4G26870,AT4G27060,AT4G27210,AT4G27270,AT4G27350,AT4G27450,AT4G27590,AT4G27970,AT4G28050,AT4G28180,AT4G28190,AT4G28310,AT4G28430,AT4G28440,AT4G28540,AT4G28640,AT4G28703,AT4G28760,AT4G28950,AT4G29190,AT4G29270,AT4G29410,AT4G29480,AT4G29720,AT4G29830,AT4G29880,AT4G30020,AT4G30170,AT4G30190,AT4G30280,AT4G30290,AT4G30410,AT4G30650,AT4G30760,AT4G30800,AT4G30840,AT4G30850,AT4G30860,AT4G30935,AT4G31000,AT4G31100,AT4G31180,AT4G31270,AT4G31290,AT4G31700,AT4G31820,AT4G31840,AT4G31890,AT4G31985,AT4G32280,AT4G32400,AT4G32830,AT4G32880,AT4G32890,AT4G33070,AT4G33130,AT4G33160,AT4G33250,AT4G33360,AT4G33400,AT4G33520,AT4G33560,AT4G33720,AT4G33810,AT4G33865,AT4G34131,AT4G34135,AT4G34160,AT4G34200,AT4G34220,AT4G34265,AT4G34590,AT4G34670,AT4G34760,AT4G34870,AT4G35070,AT4G35100,AT4G35150,AT4G35160,AT4G35350,AT4G35380,AT4G35730,AT4G35830,AT4G35880,AT4G35905,AT4G35910,AT4G35920,AT4G35930,AT4G36030,AT4G36130,AT4G36160,AT4G36180,AT4G36260,AT4G36430,AT4G36470,AT4G36610,AT4G36670,AT4G36740,AT4G36920,AT4G37160,AT4G37210,AT4G37240,AT4G37370,AT4G37390,AT4G37410,AT4G37490,AT4G37540,AT4G37550,AT4G37610,AT4G37650,AT4G37660,AT4G37710,AT4G37750,AT4G37770,AT4G37940,AT4G38080,AT4G38130,AT4G38210,AT4G38470,AT4G38480,AT4G38520,AT4G38620,AT4G38630,AT4G38660,AT4G38680,AT4G38750,AT4G38900,AT4G39030,AT4G39050,AT4G39200,AT4G39230,AT4G39660,AT4G39675,AT4G39690,AT4G39790,AT4G39830,AT4G39860,AT4G39880,AT4G39900,AT4G39920,AT5G01030,AT5G01160,AT5G01190,AT5G01200,AT5G01230,AT5G01340,AT5G01370,AT5G01500,AT5G01620,AT5G01720,AT5G01810,AT5G01890,AT5G01930,AT5G02140,AT5G02440,AT5G02450,AT5G02550,AT5G02780,AT5G02870,AT5G02890,AT5G03260,AT5G03290,AT5G03300,AT5G03510,AT5G03680,AT5G03700,AT5G03790,AT5G03860,AT5G04160,AT5G04420,AT5G04600,AT5G04740,AT5G04770,AT5G04800,AT5G04820,AT5G04860,AT5G04870,AT5G05080,AT5G05100,AT5G05160,AT5G05180,AT5G05340,AT5G05390,AT5G05520,AT5G05640,AT5G05660,AT5G05670,AT5G05680,AT5G05730,AT5G05780,AT5G05850,AT5G05860,AT5G05940,AT5G06140,AT5G06730,AT5G06750,AT5G06860,AT5G06870,AT5G06940,AT5G06970,AT5G07090,AT5G07110,AT5G07130,AT5G07310,AT5G07440,AT5G07590,AT5G07680,AT5G07800,AT5G07820,AT5G07870,AT5G07960,AT5G08000,AT5G08300,AT5G08350,AT5G08360,AT5G08565,AT5G08570,AT5G08620,AT5G09250,AT5G09270,AT5G09300,AT5G09330,AT5G09480,AT5G09520,AT5G09530,AT5G09770,AT5G10010,AT5G10020,AT5G10330,AT5G10360,AT5G10390,AT5G10400,AT5G10460,AT5G10510,AT5G10520,AT5G10540,AT5G10580,AT5G10820,AT5G10840,AT5G11280,AT5G11390,AT5G11500,AT5G11520,AT5G11560,AT5G11630,AT5G11640,AT5G11890,AT5G11980,AT5G11990,AT5G12310,AT5G12330,AT5G12340,AT5G12350,AT5G12410,AT5G12440,AT5G12870,AT5G12930,AT5G12970,AT5G13000,AT5G13080,AT5G13100,AT5G13260,AT5G13280,AT5G13290,AT5G13300,AT5G13330,AT5G13360,AT5G13370,AT5G13420,AT5G13460,AT5G13520,AT5G13580,AT5G13710,AT5G13790,AT5G13840,AT5G13850,AT5G13880,AT5G13900,AT5G13910,AT5G13960,AT5G13980,AT5G14030,AT5G14050,AT5G14080,AT5G14130,AT5G14240,AT5G14420,AT5G14450,AT5G14510,AT5G14520,AT5G14620,AT5G14650,AT5G14800,AT5G15080,AT5G15120,AT5G15160,AT5G15200,AT5G15230,AT5G15350,AT5G15490,AT5G15520,AT5G15530,AT5G15550,AT5G15610,AT5G15650,AT5G15880,AT5G16000,AT5G16070,AT5G16130,AT5G16250,AT5G16440,AT5G16510,AT5G16720,AT5G16880,AT5G17160,AT5G17300,AT5G17330,AT5G17620,AT5G17640,AT5G17760,AT5G17800,AT5G17980,AT5G17990,AT5G18110,AT5G18230,AT5G18310,AT5G18380,AT5G18470,AT5G18550,AT5G18620,AT5G18670,AT5G18690,AT5G18800,AT5G19090,AT5G19100,AT5G19110,AT5G19260,AT5G19290,AT5G19410,AT5G19440,AT5G19510,AT5G19550,AT5G19680,AT5G19690,AT5G19780,AT5G20060,AT5G20090,AT5G20180,AT5G20250,AT5G20290,AT5G20500,AT5G20540,AT5G20550,AT5G20820,AT5G20830,AT5G20860,AT5G20890,AT5G21060,AT5G22000,AT5G22440,AT5G22480,AT5G22500,AT5G22550,AT5G22570,AT5G22740,AT5G22920,AT5G23000,AT5G23140,AT5G23350,AT5G23360,AT5G23380,AT5G23400,AT5G23430,AT5G23530,AT5G23540,AT5G23610,AT5G23720,AT5G23740,AT5G23820,AT5G23830,AT5G23840,AT5G23900,AT5G23910,AT5G24030,AT5G24090,AT5G24310,AT5G24320,AT5G24400,AT5G24580,AT5G24600,AT5G24610,AT5G24760,AT5G25090,AT5G25170,AT5G25190,AT5G25510,AT5G25590,AT5G25800,AT5G25810,AT5G25930,AT5G26200,AT5G26280,AT5G26330,AT5G26340,AT5G26620,AT5G26630,AT5G26670,AT5G26710,AT5G26850,AT5G27000,AT5G27240,AT5G27330,AT5G27470,AT5G27760,AT5G27770,AT5G27820,AT5G27850,AT5G27920,AT5G28050,AT5G28060,AT5G28150,AT5G28290,AT5G28640,AT5G33300,AT5G34940,AT5G35180,AT5G35530,AT5G35580,AT5G35620,AT5G35730,AT5G35740,AT5G36710,AT5G37010,AT5G37340,AT5G37510,AT5G37690,AT5G37740,AT5G38020,AT5G38110,AT5G38310,AT5G38480,AT5G38530,AT5G38610,AT5G38630,AT5G38640,AT5G38840,AT5G38900,AT5G39050,AT5G39100,AT5G39110,AT5G39150,AT5G39160,AT5G39320,AT5G39550,AT5G39610,AT5G39660,AT5G39720,AT5G39740,AT5G39890,AT5G40200,AT5G40540,AT5G40660,AT5G40760,AT5G40990,AT5G41000,AT5G41040,AT5G41060,AT5G41180,AT5G41610,AT5G41620,AT5G41880,AT5G41950,AT5G42350,AT5G42360,AT5G42520,AT5G42560,AT5G42720,AT5G42830,AT5G43060,AT5G43320,AT5G43430,AT5G43580,AT5G43610,AT5G43810,AT5G43830,AT5G43870,AT5G43980,AT5G43990,AT5G44050,AT5G44180,AT5G44340,AT5G44380,AT5G44480,AT5G44550,AT5G44560,AT5G44730,AT5G44790,AT5G44920,AT5G44990,AT5G45280,AT5G45440,AT5G45490,AT5G45560,AT5G45600,AT5G45700,AT5G45750,AT5G46280,AT5G46290,AT5G46430,AT5G46590,AT5G46640,AT5G46700,AT5G46840,AT5G47060,AT5G47210,AT5G47370,AT5G47410,AT5G47700,AT5G47730,AT5G47770,AT5G47920,AT5G47930,AT5G47960,AT5G47990,AT5G48000,AT5G48010,AT5G48060,AT5G48070,AT5G48110,AT5G48230,AT5G48450,AT5G48460,AT5G48500,AT5G48600,AT5G48720,AT5G48760,AT5G48800,AT5G49280,AT5G49350,AT5G49450,AT5G49460,AT5G49550,AT5G49555,AT5G49560,AT5G49620,AT5G49690,AT5G49700,AT5G50000,AT5G50130,AT5G50320,AT5G50350,AT5G50375,AT5G50720,AT5G50730,AT5G50810,AT5G51060,AT5G51200,AT5G51350,AT5G51400,AT5G51430,AT5G51460,AT5G51550,AT5G51560,AT5G51600,AT5G51670,AT5G51890,AT5G51910,AT5G52050,AT5G52200,AT5G52240,AT5G52280,AT5G52470,AT5G52650,AT5G52720,AT5G52840,AT5G52900,AT5G52910,AT5G53090,AT5G53280,AT5G53290,AT5G53320,AT5G53460,AT5G53560,AT5G53830,AT5G53880,AT5G53890,AT5G53900,AT5G53990,AT5G54120,AT5G54130,AT5G54200,AT5G54230,AT5G54380,AT5G54400,AT5G54500,AT5G54510,AT5G54650,AT5G54670,AT5G54750,AT5G54900,AT5G54970,AT5G55100,AT5G55180,AT5G55250,AT5G55480,AT5G55520,AT5G55820,AT5G55830,AT5G55940,AT5G56360,AT5G56540,AT5G56580,AT5G56670,AT5G56710,AT5G56720,AT5G56730,AT5G56970,AT5G57020,AT5G57130,AT5G57290,AT5G57300,AT5G57330,AT5G57340,AT5G57390,AT5G57410,AT5G57440,AT5G57700,AT5G57970,AT5G58140,AT5G58220,AT5G58230,AT5G58300,AT5G58375,AT5G58420,AT5G58620,AT5G58630,AT5G58700,AT5G58730,AT5G58860,AT5G58900,AT5G58960,AT5G59220,AT5G59240,AT5G59290,AT5G59350,AT5G59490,AT5G59560,AT5G59690,AT5G59740,AT5G59845,AT5G59850,AT5G59870,AT5G59970,AT5G60200,AT5G60230,AT5G60280,AT5G60640,AT5G60670,AT5G60690,AT5G60780,AT5G60820,AT5G60950,AT5G60980,AT5G61000,AT5G61020,AT5G61170,AT5G61440,AT5G61690,AT5G61730,AT5G61740,AT5G61770,AT5G61865,AT5G61890,AT5G62070,AT5G62180,AT5G62260,AT5G62300,AT5G62380,AT5G62390,AT5G62410,AT5G62500,AT5G62520,AT5G62550,AT5G62630,AT5G62690,AT5G62700,AT5G62710,AT5G62880,AT5G62890,AT5G62940,AT5G63010,AT5G63030,AT5G63260,AT5G63400,AT5G63510,AT5G63560,AT5G63590,AT5G63680,AT5G63890,AT5G63930,AT5G64130,AT5G64140,AT5G64340,AT5G64410,AT5G64660,AT5G64760,AT5G65120,AT5G65360,AT5G65420,AT5G65440,AT5G65460,AT5G65510,AT5G65660,AT5G65670,AT5G65790,AT5G65810,AT5G65970,AT5G66060,AT5G66120,AT5G66170,AT5G66200,AT5G66230,AT5G66390,AT5G66410,AT5G66440,AT5G66460,AT5G66510,AT5G66560,AT5G66680,AT5G66690,AT5G66700,AT5G66750,AT5G66760,AT5G66920,AT5G66985,AT5G67100,AT5G67130,AT5G67200,AT5G67220,AT5G67240,AT5G67250,AT5G67260,AT5G67270,AT5G67460,AT5G67470,AT5G67490,AT5G67510,AT5G67600 DEEKEN_AGROBACTERIUM-TUMEFACIENS_TUMORS_DN Down-regulated in Agrobacterium tumefaciens-induced tumors of Arabidopsis thaliana. (Table S2 PubmedID:17172353) AT1G01070,AT1G01080,AT1G01140,AT1G01190,AT1G01240,AT1G01320,AT1G01420,AT1G01430,AT1G01490,AT1G01500,AT1G01790,AT1G01830,AT1G01970,AT1G02070,AT1G02140,AT1G02150,AT1G02205,AT1G02260,AT1G02270,AT1G02300,AT1G02305,AT1G02460,AT1G02475,AT1G02560,AT1G02590,AT1G02660,AT1G02820,AT1G03130,AT1G03160,AT1G03200,AT1G03240,AT1G03475,AT1G03520,AT1G03550,AT1G03630,AT1G03680,AT1G04140,AT1G04350,AT1G04420,AT1G04580,AT1G04640,AT1G04710,AT1G04960,AT1G04970,AT1G05010,AT1G05140,AT1G05170,AT1G05190,AT1G05200,AT1G05230,AT1G05300,AT1G05385,AT1G05400,AT1G05690,AT1G05900,AT1G05940,AT1G06060,AT1G06190,AT1G06200,AT1G06430,AT1G06460,AT1G06510,AT1G06680,AT1G06820,AT1G07010,AT1G07080,AT1G07180,AT1G07250,AT1G07280,AT1G07320,AT1G07390,AT1G07440,AT1G07500,AT1G07640,AT1G07645,AT1G07650,AT1G07700,AT1G07720,AT1G08110,AT1G08190,AT1G08380,AT1G08420,AT1G08540,AT1G08550,AT1G08640,AT1G08890,AT1G08900,AT1G08930,AT1G09130,AT1G09140,AT1G09240,AT1G09310,AT1G09340,AT1G09420,AT1G09530,AT1G09795,AT1G09900,AT1G10090,AT1G10310,AT1G10340,AT1G10380,AT1G10500,AT1G10510,AT1G10522,AT1G10660,AT1G10760,AT1G10900,AT1G10920,AT1G10940,AT1G10960,AT1G10970,AT1G11080,AT1G11180,AT1G11350,AT1G11410,AT1G11430,AT1G11530,AT1G11700,AT1G11750,AT1G11910,AT1G11960,AT1G12140,AT1G12240,AT1G12250,AT1G12280,AT1G12410,AT1G12710,AT1G12730,AT1G12800,AT1G12900,AT1G12940,AT1G13090,AT1G13210,AT1G13270,AT1G13650,AT1G13930,AT1G13950,AT1G13990,AT1G14030,AT1G14150,AT1G14270,AT1G14280,AT1G14345,AT1G14370,AT1G14580,AT1G14920,AT1G15140,AT1G15280,AT1G15340,AT1G15500,AT1G15510,AT1G15730,AT1G15820,AT1G15960,AT1G15980,AT1G16040,AT1G16080,AT1G16170,AT1G16400,AT1G16410,AT1G16460,AT1G16720,AT1G16730,AT1G16880,AT1G17100,AT1G17220,AT1G17280,AT1G17340,AT1G17455,AT1G17460,AT1G17640,AT1G17710,AT1G17745,AT1G17770,AT1G17840,AT1G17870,AT1G17970,AT1G18000,AT1G18060,AT1G18170,AT1G18470,AT1G18590,AT1G18710,AT1G18720,AT1G18730,AT1G18750,AT1G18880,AT1G19150,AT1G19380,AT1G19450,AT1G19660,AT1G19670,AT1G19700,AT1G19715,AT1G19720,AT1G19740,AT1G19770,AT1G20020,AT1G20160,AT1G20180,AT1G20340,AT1G20440,AT1G20490,AT1G20510,AT1G20620,AT1G20696,AT1G20810,AT1G20816,AT1G20880,AT1G21050,AT1G21065,AT1G21240,AT1G21250,AT1G21270,AT1G21350,AT1G21360,AT1G21460,AT1G21590,AT1G21600,AT1G21640,AT1G21670,AT1G21680,AT1G21760,AT1G21890,AT1G22050,AT1G22070,AT1G22140,AT1G22160,AT1G22340,AT1G22370,AT1G22530,AT1G22540,AT1G22630,AT1G22690,AT1G22700,AT1G22740,AT1G22750,AT1G22770,AT1G22850,AT1G22910,AT1G22930,AT1G23040,AT1G23050,AT1G23060,AT1G23090,AT1G23310,AT1G23360,AT1G23400,AT1G23740,AT1G23950,AT1G23970,AT1G24040,AT1G24100,AT1G24490,AT1G24575,AT1G25230,AT1G25520,AT1G25682,AT1G25988,AT1G26180,AT1G26220,AT1G26230,AT1G26670,AT1G26800,AT1G26920,AT1G26960,AT1G27070,AT1G27100,AT1G27200,AT1G27360,AT1G27370,AT1G27385,AT1G27410,AT1G27480,AT1G27510,AT1G28140,AT1G28190,AT1G28200,AT1G28230,AT1G28320,AT1G28380,AT1G28570,AT1G28600,AT1G28610,AT1G29050,AT1G29260,AT1G29340,AT1G29390,AT1G29395,AT1G29550,AT1G29590,AT1G29660,AT1G29700,AT1G29720,AT1G30220,AT1G30260,AT1G30270,AT1G30380,AT1G30500,AT1G30530,AT1G30640,AT1G30760,AT1G30840,AT1G30910,AT1G31070,AT1G31130,AT1G31160,AT1G31170,AT1G31190,AT1G31330,AT1G31420,AT1G31750,AT1G31790,AT1G31800,AT1G31812,AT1G31820,AT1G31920,AT1G31940,AT1G32060,AT1G32070,AT1G32080,AT1G32160,AT1G32220,AT1G32230,AT1G32240,AT1G32410,AT1G32470,AT1G32520,AT1G32550,AT1G32560,AT1G32900,AT1G32990,AT1G33330,AT1G33340,AT1G33490,AT1G33810,AT1G33970,AT1G34000,AT1G34040,AT1G34410,AT1G34540,AT1G34570,AT1G35340,AT1G35350,AT1G35680,AT1G35730,AT1G35750,AT1G36320,AT1G36380,AT1G36770,AT1G42550,AT1G42970,AT1G43560,AT1G43620,AT1G43650,AT1G43670,AT1G43950,AT1G44000,AT1G44414,AT1G44575,AT1G44750,AT1G44770,AT1G44800,AT1G44920,AT1G45230,AT1G45474,AT1G46768,AT1G47128,AT1G48030,AT1G48430,AT1G48460,AT1G48520,AT1G48760,AT1G49010,AT1G49230,AT1G49310,AT1G49380,AT1G49470,AT1G49970,AT1G49975,AT1G50020,AT1G50250,AT1G50320,AT1G50400,AT1G50440,AT1G50450,AT1G50460,AT1G50600,AT1G50900,AT1G50950,AT1G51090,AT1G51110,AT1G51200,AT1G51340,AT1G51440,AT1G51500,AT1G51550,AT1G51610,AT1G51805,AT1G51950,AT1G52000,AT1G52220,AT1G52230,AT1G52400,AT1G52410,AT1G52510,AT1G52550,AT1G52590,AT1G52720,AT1G52800,AT1G52810,AT1G52870,AT1G52880,AT1G52920,AT1G53090,AT1G53160,AT1G53210,AT1G53400,AT1G53450,AT1G53560,AT1G53670,AT1G54040,AT1G54080,AT1G54160,AT1G54290,AT1G54350,AT1G54500,AT1G54520,AT1G54730,AT1G54780,AT1G54923,AT1G55090,AT1G55110,AT1G55120,AT1G55265,AT1G55370,AT1G55480,AT1G55490,AT1G55520,AT1G55670,AT1G55680,AT1G55910,AT1G55960,AT1G56050,AT1G56170,AT1G56300,AT1G56430,AT1G56500,AT1G56560,AT1G56600,AT1G56610,AT1G56650,AT1G57770,AT1G58848,AT1G59124,AT1G59218,AT1G59700,AT1G59840,AT1G59950,AT1G60060,AT1G60160,AT1G60190,AT1G60260,AT1G60960,AT1G60970,AT1G60990,AT1G61180,AT1G61250,AT1G61300,AT1G61520,AT1G61660,AT1G61740,AT1G61990,AT1G62180,AT1G62250,AT1G62360,AT1G62390,AT1G62430,AT1G62560,AT1G62630,AT1G62660,AT1G62750,AT1G62760,AT1G62780,AT1G62810,AT1G63010,AT1G63190,AT1G63610,AT1G63770,AT1G63800,AT1G63830,AT1G63970,AT1G64140,AT1G64150,AT1G64350,AT1G64355,AT1G64360,AT1G64370,AT1G64430,AT1G64500,AT1G64510,AT1G64680,AT1G64710,AT1G64770,AT1G64780,AT1G64810,AT1G64860,AT1G64930,AT1G64950,AT1G64970,AT1G65070,AT1G65190,AT1G65230,AT1G65250,AT1G65260,AT1G65410,AT1G65480,AT1G65490,AT1G65790,AT1G65800,AT1G66020,AT1G66070,AT1G66130,AT1G66140,AT1G66200,AT1G66230,AT1G66330,AT1G66390,AT1G66670,AT1G66840,AT1G66910,AT1G66970,AT1G66980,AT1G66990,AT1G67080,AT1G67090,AT1G67280,AT1G67340,AT1G67360,AT1G67470,AT1G67600,AT1G67660,AT1G67700,AT1G67810,AT1G67840,AT1G67860,AT1G67865,AT1G67870,AT1G67970,AT1G68010,AT1G68270,AT1G68300,AT1G68490,AT1G68530,AT1G68540,AT1G68570,AT1G68590,AT1G68600,AT1G68660,AT1G68670,AT1G68740,AT1G69010,AT1G69160,AT1G69170,AT1G69330,AT1G69390,AT1G69610,AT1G69640,AT1G69690,AT1G69720,AT1G69730,AT1G69840,AT1G69870,AT1G69935,AT1G70160,AT1G70200,AT1G70230,AT1G70410,AT1G70510,AT1G70700,AT1G70760,AT1G70790,AT1G70810,AT1G70820,AT1G70890,AT1G70900,AT1G71030,AT1G71040,AT1G71090,AT1G71330,AT1G71340,AT1G71480,AT1G71500,AT1G71710,AT1G71720,AT1G71810,AT1G71820,AT1G71870,AT1G71960,AT1G71970,AT1G72030,AT1G72300,AT1G72430,AT1G72510,AT1G72800,AT1G72830,AT1G72910,AT1G72930,AT1G73040,AT1G73060,AT1G73110,AT1G73170,AT1G73330,AT1G73390,AT1G73470,AT1G73530,AT1G73630,AT1G73650,AT1G73680,AT1G73700,AT1G73710,AT1G73750,AT1G73870,AT1G73880,AT1G73885,AT1G73920,AT1G73950,AT1G74090,AT1G74410,AT1G74660,AT1G74680,AT1G74730,AT1G74850,AT1G74880,AT1G74950,AT1G74970,AT1G75100,AT1G75210,AT1G75300,AT1G75350,AT1G75460,AT1G75690,AT1G75810,AT1G75820,AT1G75980,AT1G76030,AT1G76040,AT1G76080,AT1G76100,AT1G76110,AT1G76120,AT1G76130,AT1G76180,AT1G76350,AT1G76360,AT1G76450,AT1G76520,AT1G76530,AT1G76570,AT1G76720,AT1G76730,AT1G76800,AT1G76820,AT1G76890,AT1G76920,AT1G76960,AT1G77000,AT1G77090,AT1G77370,AT1G77410,AT1G77420,AT1G77480,AT1G77490,AT1G77850,AT1G77930,AT1G77990,AT1G78010,AT1G78020,AT1G78070,AT1G78140,AT1G78200,AT1G78210,AT1G78370,AT1G78450,AT1G78460,AT1G78510,AT1G78620,AT1G78630,AT1G78670,AT1G78680,AT1G78750,AT1G78780,AT1G78815,AT1G78970,AT1G78995,AT1G79040,AT1G79050,AT1G79270,AT1G79410,AT1G79510,AT1G79520,AT1G79600,AT1G79850,AT1G79900,AT1G79920,AT1G79930,AT1G80000,AT1G80010,AT1G80030,AT1G80130,AT1G80170,AT1G80300,AT1G80310,AT1G80400,AT1G80480,AT1G80760,AT1G80800,AT1G80940,AT2G01110,AT2G01170,AT2G01220,AT2G01290,AT2G01300,AT2G01320,AT2G01400,AT2G01490,AT2G01540,AT2G01570,AT2G01590,AT2G01600,AT2G01620,AT2G01680,AT2G01870,AT2G01890,AT2G01910,AT2G02020,AT2G02070,AT2G02080,AT2G02410,AT2G03140,AT2G03310,AT2G03330,AT2G03420,AT2G03500,AT2G03550,AT2G03710,AT2G03730,AT2G03750,AT2G03800,AT2G03810,AT2G03890,AT2G03980,AT2G04030,AT2G04039,AT2G04066,AT2G04070,AT2G04080,AT2G04240,AT2G04270,AT2G04305,AT2G04360,AT2G04410,AT2G04570,AT2G04690,AT2G04700,AT2G04790,AT2G04795,AT2G05310,AT2G05520,AT2G05540,AT2G05620,AT2G05630,AT2G05755,AT2G06010,AT2G06520,AT2G07000,AT2G07180,AT2G07671,AT2G07718,AT2G11810,AT2G12400,AT2G13100,AT2G13360,AT2G14210,AT2G14750,AT2G14880,AT2G14910,AT2G15040,AT2G15050,AT2G15080,AT2G15310,AT2G15390,AT2G15580,AT2G15620,AT2G16400,AT2G16740,AT2G16990,AT2G17033,AT2G17040,AT2G17240,AT2G17260,AT2G17270,AT2G17540,AT2G17710,AT2G17840,AT2G17972,AT2G18170,AT2G18350,AT2G18560,AT2G18570,AT2G18710,AT2G18790,AT2G18950,AT2G19310,AT2G19350,AT2G19450,AT2G19650,AT2G19830,AT2G20100,AT2G20180,AT2G20230,AT2G20260,AT2G20270,AT2G20340,AT2G20500,AT1G48000,AT2G20610,AT2G20630,AT2G20725,AT2G20740,AT2G20860,AT2G20890,AT2G20920,AT2G20960,AT2G21120,AT2G21280,AT2G21330,AT2G21340,AT2G21370,AT2G21385,AT2G21410,AT2G21510,AT2G21530,AT2G21640,AT2G21730,AT2G21820,AT2G21880,AT2G21960,AT2G21970,AT2G22240,AT2G22330,AT2G22360,AT2G22540,AT2G22680,AT2G22860,AT2G22870,AT2G22970,AT2G22980,AT2G22990,AT2G23200,AT2G23390,AT2G23430,AT2G23670,AT2G23760,AT2G23840,AT2G24020,AT2G24040,AT2G24060,AT2G24090,AT2G24220,AT2G24240,AT2G24270,AT2G24280,AT2G24420,AT2G24580,AT2G24740,AT2G24820,AT2G24860,AT2G24940,AT2G25080,AT2G25140,AT2G25310,AT2G25450,AT2G25510,AT2G25590,AT2G25610,AT2G25620,AT2G25625,AT2G25680,AT2G25760,AT2G26080,AT2G26170,AT2G26250,AT2G26340,AT2G26500,AT2G26690,AT2G26740,AT2G26830,AT2G26870,AT2G26890,AT2G26900,AT2G26910,AT2G26930,AT2G27150,AT2G27190,AT2G27210,AT2G27220,AT2G27290,AT2G27360,AT2G27500,AT2G27680,AT2G27920,AT2G27990,AT2G28350,AT2G28400,AT2G28605,AT2G28720,AT2G28800,AT2G28840,AT2G28890,AT2G28900,AT2G29090,AT2G29120,AT2G29130,AT2G29180,AT2G29290,AT2G29300,AT2G29320,AT2G29350,AT2G29360,AT2G29370,AT2G29590,AT2G29630,AT2G29650,AT2G29670,AT2G29720,AT2G30080,AT2G30170,AT2G30350,AT2G30390,AT2G30570,AT2G30950,AT2G31040,AT2G31070,AT2G31110,AT2G31120,AT2G31400,AT2G31530,AT2G31570,AT2G31660,AT2G31790,AT2G31800,AT2G31820,AT2G31890,AT2G31980,AT2G32090,AT2G32160,AT2G32240,AT2G32260,AT2G32290,AT2G32390,AT2G32430,AT2G32440,AT2G32480,AT2G32500,AT2G32530,AT2G32540,AT2G32680,AT2G32830,AT2G32860,AT2G32870,AT2G32880,AT2G33050,AT2G33060,AT2G33180,AT2G33380,AT2G33390,AT2G33400,AT2G33420,AT2G33430,AT2G33450,AT2G33480,AT2G33735,AT2G33800,AT2G33810,AT2G34160,AT2G34310,AT2G34585,AT2G34610,AT2G34640,AT2G34810,AT2G34860,AT2G34960,AT2G35050,AT2G35060,AT2G35070,AT2G35090,AT2G35260,AT2G35290,AT2G35300,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AT3G47450,AT3G47600,AT3G47620,AT3G47650,AT3G47780,AT3G47960,AT3G48185,AT3G48200,AT3G48420,AT3G48460,AT3G48500,AT3G48640,AT3G48730,AT3G48740,AT3G49160,AT3G49220,AT3G49360,AT3G49560,AT3G49880,AT3G50210,AT3G50270,AT3G50280,AT3G50340,AT3G50350,AT3G50440,AT3G50500,AT3G50560,AT3G50685,AT3G50740,AT3G50750,AT3G50820,AT3G50830,AT3G50940,AT3G51140,AT3G51420,AT3G51510,AT3G51520,AT3G51600,AT3G51730,AT3G51820,AT3G51830,AT3G51870,AT3G51880,AT3G51895,AT3G51960,AT3G52150,AT3G52155,AT3G52230,AT3G52380,AT3G52710,AT3G52800,AT3G52950,AT3G53130,AT3G53230,AT3G53280,AT3G53310,AT3G53370,AT3G53420,AT3G53470,AT3G53720,AT3G53920,AT3G53960,AT3G53970,AT3G53980,AT3G54050,AT3G54090,AT3G54140,AT3G54200,AT3G54210,AT3G54220,AT3G54290,AT3G54430,AT3G54720,AT3G54890,AT3G54900,AT3G55040,AT3G55110,AT3G55130,AT3G55250,AT3G55290,AT3G55310,AT3G55330,AT3G55390,AT3G55630,AT3G55640,AT3G55760,AT3G55800,AT3G55830,AT3G55940,AT3G55960,AT3G56010,AT3G56040,AT3G56050,AT3G56080,AT3G56090,AT3G56190,AT3G56200,AT3G56260,AT3G56290,AT3G56450,AT3G56620,AT3G56630,AT3G56650,AT3G56710,AT3G56730,AT3G56800,AT3G56910,AT3G56940,AT3G57020,AT3G57090,AT3G57180,AT3G57190,AT3G57260,AT3G57430,AT3G57520,AT3G57530,AT3G57540,AT3G57680,AT3G57770,AT3G57810,AT3G57990,AT3G58010,AT3G58170,AT3G58620,AT3G58680,AT3G58830,AT3G58970,AT3G58990,AT3G59060,AT3G59280,AT3G59530,AT3G59580,AT3G59780,AT3G60350,AT3G60370,AT3G60520,AT3G60590,AT3G60690,AT3G60720,AT3G60750,AT3G60910,AT3G61080,AT3G61200,AT3G61210,AT3G61260,AT3G61430,AT3G61470,AT3G61700,AT3G61770,AT3G61870,AT3G61880,AT3G61890,AT3G61900,AT3G62010,AT3G62260,AT3G62420,AT3G62550,AT3G62590,AT3G62650,AT3G62660,AT3G62700,AT3G62750,AT3G62820,AT3G62910,AT3G62960,AT3G63050,AT3G63110,AT3G63140,AT3G63160,AT3G63190,AT3G63210,AT3G63260,AT3G63310,AT3G63390,AT3G63490,AT3G63520,AT4G00030,AT4G00050,AT4G00335,AT4G00355,AT4G00360,AT4G00370,AT4G00390,AT4G00500,AT4G00700,AT4G00720,AT4G00730,AT4G00750,AT4G00760,AT4G00780,AT4G00880,AT4G00895,AT4G01010,AT4G01050,AT4G01070,AT4G01150,AT4G01170,AT4G01280,AT4G01310,AT4G01390,AT4G01440,AT4G01480,AT4G01800,AT4G01840,AT4G01940,AT4G02075,AT4G02260,AT4G02340,AT4G02420,AT4G02430,AT4G02510,AT4G02530,AT4G02600,AT4G02630,AT4G02770,AT4G02920,AT4G03060,AT4G03280,AT4G03400,AT4G03410,AT4G03520,AT4G04030,AT4G04330,AT4G04340,AT4G04350,AT4G04460,AT4G04470,AT4G04640,AT4G04710,AT4G04720,AT4G04750,AT4G04770,AT4G04830,AT4G04850,AT4G04880,AT4G04890,AT4G04955,AT4G05020,AT4G05110,AT4G05120,AT4G05160,AT4G05180,AT4G05300,AT4G05590,AT4G07390,AT4G07435,AT4G07670,AT4G08150,AT4G08280,AT4G08290,AT4G08300,AT4G08500,AT4G08956,AT4G09010,AT4G09020,AT4G09350,AT4G09560,AT4G09650,AT4G09720,AT4G09760,AT4G09900,AT4G10000,AT4G10120,AT4G10170,AT4G10300,AT4G10310,AT4G10330,AT4G10380,AT4G10470,AT4G10770,AT4G11100,AT4G11110,AT4G11175,AT4G11220,AT4G11310,AT4G11320,AT4G11330,AT4G11570,AT4G11830,AT4G11850,AT4G11960,AT4G12000,AT4G12030,AT4G12060,AT4G12280,AT4G12290,AT4G12310,AT4G12320,AT4G12470,AT4G12800,AT4G12830,AT4G12970,AT4G13010,AT4G13020,AT4G13140,AT4G13150,AT4G13250,AT4G13430,AT4G13500,AT4G13510,AT4G13550,AT4G13590,AT4G13670,AT4G13770,AT4G13800,AT4G14070,AT4G14190,AT4G14200,AT4G14210,AT4G14230,AT4G14240,AT4G14400,AT4G14540,AT4G14570,AT4G14580,AT4G14680,AT4G14710,AT4G14716,AT4G14780,AT4G14870,AT4G14890,AT4G15110,AT4G15440,AT4G15490,AT4G15545,AT4G15550,AT4G15560,AT4G15700,AT4G16000,AT4G16146,AT4G16150,AT4G16190,AT4G16360,AT4G16380,AT4G16390,AT4G16410,AT4G16490,AT4G16500,AT4G16920,AT4G16950,AT4G16960,AT4G16990,AT4G17090,AT4G17100,AT4G17170,AT4G17245,AT4G17250,AT4G17340,AT4G17360,AT4G17370,AT4G17460,AT4G17550,AT4G17560,AT4G17570,AT4G17600,AT4G17640,AT4G17740,AT4G17840,AT4G17880,AT4G17970,AT4G18050,AT4G18120,AT4G18130,AT4G18210,AT4G18220,AT4G18240,AT4G18370,AT4G18480,AT4G18520,AT4G18530,AT4G18580,AT4G18740,AT4G18810,AT4G18880,AT4G18900,AT4G18905,AT4G18975,AT4G18980,AT4G19100,AT4G19170,AT4G19370,AT4G19420,AT4G19450,AT4G19840,AT4G19960,AT4G20010,AT4G20070,AT4G20130,AT4G20260,AT4G20360,AT4G20370,AT4G20820,AT4G21190,AT4G21210,AT4G21280,AT4G21326,AT4G21350,AT4G21550,AT4G21650,AT4G21750,AT4G21860,AT4G21910,AT4G22190,AT4G22200,AT4G22220,AT4G22260,AT4G22270,AT4G22750,AT4G22790,AT4G22830,AT4G22890,AT4G22920,AT4G23010,AT4G23050,AT4G23100,AT4G23140,AT4G23160,AT4G23180,AT4G23260,AT4G23320,AT4G23493,AT4G23570,AT4G23640,AT4G23730,AT4G23880,AT4G23890,AT4G23920,AT4G23990,AT4G24000,AT4G24090,AT4G24120,AT4G24150,AT4G24280,AT4G24450,AT4G24510,AT4G24700,AT4G24750,AT4G24770,AT4G24930,AT4G25000,AT4G25020,AT4G25130,AT4G25390,AT4G25434,AT4G25440,AT4G25620,AT4G25650,AT4G25700,AT4G25960,AT4G25970,AT4G26130,AT4G26150,AT4G26370,AT4G26520,AT4G26530,AT4G26700,AT4G26850,AT4G26860,AT4G26980,AT4G27030,AT4G27040,AT4G27300,AT4G27380,AT4G27390,AT4G27480,AT4G27600,AT4G27657,AT4G27700,AT4G27710,AT4G27800,AT4G27820,AT4G27830,AT4G27990,AT4G28025,AT4G28030,AT4G28080,AT4G28530,AT4G28660,AT4G28740,AT4G28750,AT4G28770,AT4G29010,AT4G29060,AT4G29070,AT4G29100,AT4G29130,AT4G29210,AT4G29220,AT4G29500,AT4G29670,AT4G29700,AT4G29750,AT4G29770,AT4G29820,AT4G29890,AT4G30080,AT4G30110,AT4G30200,AT4G30270,AT4G30450,AT4G30460,AT4G30470,AT4G30530,AT4G30600,AT4G30630,AT4G30950,AT4G30993,AT4G31040,AT4G31080,AT4G31090,AT4G31110,AT4G31115,AT4G31130,AT4G31240,AT4G31330,AT4G31390,AT4G31450,AT4G31500,AT4G31530,AT4G31540,AT4G31850,AT4G31860,AT4G31870,AT4G32020,AT4G32060,AT4G32190,AT4G32240,AT4G32260,AT4G32270,AT4G32340,AT4G32350,AT4G32520,AT4G32530,AT4G32590,AT4G32770,AT4G32940,AT4G33000,AT4G33010,AT4G33030,AT4G33040,AT4G33080,AT4G33240,AT4G33370,AT4G33380,AT4G33420,AT4G33450,AT4G33470,AT4G33480,AT4G33500,AT4G33510,AT4G33630,AT4G33660,AT4G33670,AT4G33890,AT4G33960,AT4G33985,AT4G34090,AT4G34120,AT4G34190,AT4G34240,AT4G34290,AT4G34350,AT4G34460,AT4G34490,AT4G34560,AT4G34620,AT4G34630,AT4G34710,AT4G34720,AT4G34820,AT4G34830,AT4G34920,AT4G34930,AT4G34980,AT4G35000,AT4G35090,AT4G35240,AT4G35250,AT4G35270,AT4G35290,AT4G35450,AT4G35470,AT4G35510,AT4G35760,AT4G35860,AT4G36060,AT4G36250,AT4G36390,AT4G36530,AT4G36550,AT4G36600,AT4G36710,AT4G36810,AT4G36870,AT4G36900,AT4G36930,AT4G37040,AT4G37200,AT4G37380,AT4G37400,AT4G37430,AT4G37470,AT4G37510,AT4G37560,AT4G37680,AT4G37760,AT4G37880,AT4G37930,AT4G38020,AT4G38060,AT4G38225,AT4G38250,AT4G38290,AT4G38320,AT4G38340,AT4G38380,AT4G38460,AT4G38550,AT4G38560,AT4G38690,AT4G38710,AT4G38740,AT4G38840,AT4G38970,AT4G39040,AT4G39100,AT4G39235,AT4G39710,AT4G39740,AT4G39800,AT4G39850,AT4G39940,AT4G39960,AT4G39970,AT4G40010,AT5G01220,AT5G01260,AT5G01300,AT5G01520,AT5G01530,AT5G01650,AT5G01750,AT5G01820,AT5G01950,AT5G02030,AT5G02120,AT5G02250,AT5G02380,AT5G02480,AT5G02490,AT5G02560,AT5G02600,AT5G02710,AT5G02790,AT5G02830,AT5G02940,AT5G03030,AT5G03070,AT5G03370,AT5G03420,AT5G03430,AT5G03555,AT5G03560,AT5G03640,AT5G03880,AT5G03900,AT5G03940,AT5G04000,AT5G04080,AT5G04140,AT5G04170,AT5G04220,AT5G04230,AT5G04260,AT5G04360,AT5G04440,AT5G04480,AT5G04490,AT5G04590,AT5G04810,AT5G04900,AT5G04950,AT5G04980,AT5G05110,AT5G05200,AT5G05280,AT5G05600,AT5G05630,AT5G05740,AT5G05930,AT5G06130,AT5G06265,AT5G06280,AT5G06290,AT5G06340,AT5G06410,AT5G06440,AT5G06480,AT5G06510,AT5G06530,AT5G06580,AT5G06600,AT5G06690,AT5G06850,AT5G07020,AT5G07220,AT5G07330,AT5G07460,AT5G07580,AT5G07900,AT5G07920,AT5G08400,AT5G08410,AT5G08500,AT5G08510,AT5G08590,AT5G08610,AT5G08650,AT5G08740,AT5G09220,AT5G09440,AT5G09620,AT5G09660,AT5G09670,AT5G09820,AT5G09930,AT5G09990,AT5G10180,AT5G10300,AT5G10380,AT5G10470,AT5G10650,AT5G10695,AT5G10750,AT5G10930,AT5G10960,AT5G11060,AT5G11070,AT5G11250,AT5G11450,AT5G11480,AT5G11580,AT5G11610,AT5G11680,AT5G11700,AT5G11730,AT5G11770,AT5G11840,AT5G12200,AT5G12390,AT5G12840,AT5G13030,AT5G13050,AT5G13170,AT5G13190,AT5G13200,AT5G13240,AT5G13410,AT5G13520,AT5G13550,AT5G13650,AT5G13720,AT5G13730,AT5G13770,AT5G13800,AT5G13810,AT5G14060,AT5G14260,AT5G14270,AT5G14320,AT5G14350,AT5G14570,AT5G14590,AT5G14660,AT5G14710,AT5G14740,AT5G14880,AT5G14910,AT5G14940,AT5G14970,AT5G15190,AT5G15410,AT5G15450,AT5G15850,AT5G15860,AT5G16140,AT5G16200,AT5G16380,AT5G16530,AT5G16540,AT5G16550,AT5G16560,AT5G16570,AT5G16660,AT5G16710,AT5G16820,AT5G17060,AT5G17170,AT5G17230,AT5G17310,AT5G17450,AT5G17560,AT5G17850,AT5G17860,AT5G17910,AT5G18100,AT5G18130,AT5G18240,AT5G18340,AT5G18640,AT5G18760,AT5G18850,AT5G19140,AT5G19220,AT5G19490,AT5G19500,AT5G19540,AT5G19740,AT5G19855,AT5G19875,AT5G19900,AT5G19940,AT5G19970,AT5G20140,AT5G20220,AT5G20280,AT5G20410,AT5G20470,AT5G20480,AT5G20490,AT5G20700,AT5G20935,AT5G21070,AT5G21100,AT5G22250,AT5G23010,AT5G23060,AT5G23120,AT5G23230,AT5G23240,AT5G23440,AT5G23660,AT5G23750,AT5G23810,AT5G23920,AT5G24120,AT5G24150,AT5G24160,AT5G24170,AT5G24210,AT5G24420,AT5G24520,AT5G24650,AT5G24670,AT5G24860,AT5G24870,AT5G24930,AT5G24990,AT5G25110,AT5G25130,AT5G25140,AT5G25240,AT5G25280,AT5G25450,AT5G25610,AT5G25630,AT5G25840,AT5G25890,AT5G25980,AT5G25990,AT5G26000,AT5G26570,AT5G26600,AT5G26820,AT5G27150,AT5G27220,AT5G27280,AT5G27290,AT5G27350,AT5G27360,AT5G27560,AT5G27630,AT5G27730,AT5G27930,AT5G28010,AT5G28020,AT5G28030,AT5G28080,AT5G28300,AT5G28450,AT5G28500,AT5G28750,AT5G28840,AT5G30510,AT5G33280,AT5G33290,AT5G34850,AT5G35170,AT5G35210,AT5G35220,AT5G35320,AT5G35480,AT5G35490,AT5G35630,AT5G35700,AT5G35840,AT5G35970,AT5G36120,AT5G36170,AT5G36700,AT5G36940,AT5G37070,AT5G37360,AT5G37500,AT5G37600,AT5G37670,AT5G37680,AT5G38240,AT5G38250,AT5G38290,AT5G38360,AT5G38410,AT5G38420,AT5G38430,AT5G38510,AT5G38520,AT5G38660,AT5G38710,AT5G38780,AT5G38980,AT5G38990,AT5G39000,AT5G39020,AT5G39080,AT5G39210,AT5G39590,AT5G39830,AT5G40060,AT5G40160,AT5G40170,AT5G40450,AT5G40500,AT5G40930,AT5G40970,AT5G41350,AT5G41700,AT5G41740,AT5G41750,AT5G41790,AT5G41800,AT5G41810,AT5G41920,AT5G41960,AT5G42070,AT5G42270,AT5G42310,AT5G42390,AT5G42530,AT5G42760,AT5G42765,AT5G42890,AT5G43180,AT5G43260,AT5G43330,AT5G43380,AT5G43440,AT5G43750,AT5G43780,AT5G43850,AT5G43920,AT5G44160,AT5G44190,AT5G44410,AT5G44520,AT5G44530,AT5G44580,AT5G44650,AT5G45170,AT5G45350,AT5G45380,AT5G45390,AT5G45430,AT5G45610,AT5G45650,AT5G45680,AT5G45800,AT5G45890,AT5G46110,AT5G46240,AT5G46250,AT5G46420,AT5G46450,AT5G46560,AT5G46580,AT5G46790,AT5G46860,AT5G47110,AT5G47120,AT5G47190,AT5G47330,AT5G47560,AT5G47630,AT5G47650,AT5G47720,AT5G47830,AT5G47840,AT5G47900,AT5G48030,AT5G48150,AT5G48300,AT5G48470,AT5G48730,AT5G48840,AT5G49610,AT5G49630,AT5G49660,AT5G49730,AT5G49740,AT5G49840,AT5G49890,AT5G49900,AT5G49940,AT5G49970,AT5G50160,AT5G50240,AT5G50250,AT5G50260,AT5G50400,AT5G50780,AT5G50800,AT5G50900,AT5G50920,AT5G51010,AT5G51110,AT5G51170,AT5G51540,AT5G51680,AT5G51720,AT5G51740,AT5G51970,AT5G52010,AT5G52030,AT5G52070,AT5G52100,AT5G52190,AT5G52300,AT5G52420,AT5G52430,AT5G52440,AT5G52550,AT5G52780,AT5G52970,AT5G53020,AT5G53050,AT5G53140,AT5G53170,AT5G53350,AT5G53420,AT5G53480,AT5G53550,AT5G53580,AT5G53710,AT5G53870,AT5G53940,AT5G54250,AT5G54290,AT5G54600,AT5G54610,AT5G54630,AT5G54660,AT5G54770,AT5G54840,AT5G54870,AT5G54940,AT5G55050,AT5G55210,AT5G55220,AT5G55570,AT5G55580,AT5G55640,AT5G55740,AT5G55910,AT5G55930,AT5G55960,AT5G55990,AT5G56040,AT5G56130,AT5G56140,AT5G56150,AT5G56260,AT5G56520,AT5G56850,AT5G56860,AT5G56910,AT5G57030,AT5G57040,AT5G57140,AT5G57150,AT5G57170,AT5G57180,AT5G57345,AT5G57350,AT5G57360,AT5G57610,AT5G57630,AT5G57710,AT5G57800,AT5G57815,AT5G57930,AT5G57960,AT5G58060,AT5G58120,AT5G58140,AT5G58200,AT5G58250,AT5G58260,AT5G58310,AT5G58330,AT5G58540,AT5G58570,AT5G58650,AT5G58770,AT5G58870,AT5G58920,AT5G58950,AT5G59030,AT5G59080,AT5G59130,AT5G59180,AT5G59250,AT5G59300,AT5G59310,AT5G59320,AT5G59330,AT5G59400,AT5G59540,AT5G59610,AT5G59670,AT5G59680,AT5G59750,AT5G59780,AT5G60360,AT5G60450,AT5G60470,AT5G60600,AT5G60850,AT5G60860,AT5G60910,AT5G61040,AT5G61410,AT5G61420,AT5G61430,AT5G61520,AT5G61560,AT5G61640,AT5G61660,AT5G61670,AT5G61810,AT5G61820,AT5G61930,AT5G62000,AT5G62020,AT5G62130,AT5G62140,AT5G62200,AT5G62360,AT5G62470,AT5G62480,AT5G62570,AT5G62650,AT5G62680,AT5G62720,AT5G62810,AT5G63050,AT5G63130,AT5G63310,AT5G63410,AT5G63420,AT5G63710,AT5G63760,AT5G63770,AT5G63800,AT5G64040,AT5G64090,AT5G64230,AT5G64240,AT5G64280,AT5G64380,AT5G64570,AT5G64640,AT5G64730,AT5G64770,AT5G64800,AT5G64840,AT5G64860,AT5G64990,AT5G65040,AT5G65220,AT5G65280,AT5G65480,AT5G65610,AT5G65720,AT5G65840,AT5G65870,AT5G65890,AT5G65990,AT5G66090,AT5G66160,AT5G66190,AT5G66400,AT5G66470,AT5G66490,AT5G66570,AT5G66630,AT5G66880,AT5G67030,AT5G67370,AT5G67390,AT5G67520,AT5G67560 DEEKEN_AGROBACTERIUM_TUMORS/TUMOR-FREE-INFLORESCENCE-STALK_UP Up-regulated expressed genes of Agrobacterium tumefaciens(P<0.01_all)-induced Arabidopsis tumors versus tumor-free inflorescence stalk tissue. (Table S3 PubmedID:17172353) 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AT1G11240,AT5G07820,AT2G27060,AT1G70600,AT3G07210,AT3G50000,AT5G67260,AT1G34630,AT3G53430,AT1G08080,AT4G28760,AT3G42725,AT5G25090,AT1G26880,AT5G48450,AT5G02870,AT1G53000,AT3G48210,AT2G16780,AT5G53990,AT3G06040,AT3G62060,AT2G43140,AT5G62410,AT4G38520,AT1G63160,AT3G07510,AT1G63460,AT1G79820,AT3G14220,AT5G38640,AT5G05670,AT1G69810,AT4G23680,AT2G24850,AT4G17240,AT4G31985,AT1G24625,AT1G18080,AT2G43150,AT3G61250,AT1G63020,AT3G10550,AT4G30170,AT5G09270,AT2G36160,AT1G34030,AT1G27450,AT4G30935,AT1G18620,AT2G45490,AT1G21720,AT5G04420,AT1G64590,AT1G13980,AT5G13790,AT3G10880,AT5G59240,AT3G62360,AT1G74055,AT3G11580,AT1G64790,AT1G26250,AT5G50810,AT1G52340,AT1G01225,AT5G08360,AT1G10570,AT5G56720,AT1G79990,AT5G11630,AT4G26610,AT3G28900,AT5G51400,AT2G21060,AT5G41610,AT5G63010,AT5G50000,AT3G52930,AT1G68230,AT2G16390,AT1G31880,AT4G28310,AT5G17990,AT1G16510,AT1G22450,AT3G51310,AT5G49555,AT1G71730,AT4G14060,AT5G56360,AT3G53350,AT3G03130,AT5G58730,AT1G12020,AT1G10550,AT1G04020,AT5G66120,AT1G79950,AT1G71930,AT5G61020,AT1G04850,AT1G06390,AT3G20000,AT4G26660,AT4G22610,AT5G47990,AT5G06140,AT2G23700,AT1G65290,AT3G01175,AT1G07480,AT1G53645,AT2G16700,AT4G00200,AT1G77750,AT3G42660,AT5G02440,AT1G67630,AT4G32400,AT3G50300,AT1G63720,AT2G31270,AT5G66560,AT1G29520,AT1G52930,AT3G51800,AT5G02140,AT1G80350,AT2G40260,AT5G09770,AT3G62130,AT4G16610,AT3G14790,AT3G54690,AT5G04870,AT3G11500,AT5G66680,AT2G17720,AT1G79140,AT2G26760,AT4G00990,AT1G55690,AT3G62870,AT5G12870,AT2G37270,AT3G02920,AT3G45800,AT3G52300,AT5G01200,AT4G34670,AT3G56130,AT4G38130,AT5G02890,AT3G57760,AT5G38630,AT1G49600,AT1G19710,AT4G37660,AT3G09810,AT5G43320,AT1G11680,AT3G53610,AT3G49390,AT3G18090,AT5G42350,AT5G01500,AT1G67930,AT1G19525,AT3G13090,AT3G02820,AT5G18230,AT1G23750,AT3G55690,AT5G16510,AT5G48720,AT2G23380,AT5G20180,AT3G03980,AT5G04860,AT2G30980,AT1G14510,AT1G15570,AT1G48950,AT4G35930,AT1G63220,AT5G01930,AT3G43610,AT1G61770,AT3G43250,AT5G67200,AT5G50320,AT5G11560,AT3G04860,AT3G19300,AT2G46200,AT2G18020,AT1G30630,AT1G24360,AT4G31890,AT3G06390,AT5G57700,AT5G11980,AT1G31860,AT1G10700,AT3G62250,AT3G53870,AT5G54650,AT4G14110,AT3G02990,AT5G52840,AT2G27530,AT5G51350,AT2G03280,AT5G51910,AT5G01160,AT3G03220,AT1G43170,AT1G23190,AT2G47840,AT2G45200,AT1G24050,AT5G59220,AT2G39390,AT1G14320,AT5G05640,AT3G54990,AT1G07070,AT3G07050,AT1G24280,AT4G16120,AT3G06360,AT5G23910,AT1G28510,AT4G03340,AT3G13440,AT2G20300,AT3G60600,AT1G51940,AT4G35905,AT4G10480,AT4G28190,AT3G61670,AT2G31730,AT4G14900,AT3G56480,AT3G11820,AT3G58350,AT5G03860,AT1G60890,AT3G19130,AT5G46640,AT1G69770,AT1G07620,AT5G59560,AT5G27770,AT1G16340,AT5G27820,AT1G21750,AT1G20700,AT5G04160,AT2G38250,AT5G35740,AT3G11800,AT1G72670,AT3G42950,AT5G05780,AT5G51460,AT1G78040,AT4G21270,AT1G12310,AT3G27070,AT2G21390,AT4G22050,AT3G11830,AT5G65970,AT3G51270,AT5G18110,AT3G22160,AT3G26720,AT5G47960,AT5G46290,AT5G35530,AT4G30010,AT5G67250,AT5G60230,AT4G33520,AT3G45850,AT5G12440,AT1G31780,AT4G37550,AT1G14900,AT1G76260,AT4G22150,AT5G58960,AT1G34670,AT1G63290,AT1G64190,AT5G48060,AT1G57870,AT1G03210,AT2G45420,AT3G60380,AT3G19120,AT1G53490,AT1G54140,AT3G21680,AT1G06960,AT1G61690,AT1G13730,AT3G06150,AT4G12250,AT2G15880,AT4G00100,AT2G42210,AT5G14130,AT1G74740,AT2G47960,AT5G24600,AT3G58610,AT1G15690,AT2G14900,AT4G11170,AT2G43390,AT4G35910,AT1G11390,AT1G06590,AT4G16720,AT1G01370,AT1G32210,AT3G17240,AT2G34180,AT5G12410,AT1G67140,AT1G10630,AT5G20890,AT5G52470,AT4G39690,AT1G57630,AT3G52590,AT2G35110,AT5G27240,AT5G07590,AT3G14360,AT5G14240,AT1G13920,AT1G62045,AT1G77720,AT1G55900,AT5G35180,AT3G46430,AT5G01190,AT1G47270,AT1G22800,AT5G09330,AT1G30400,AT2G18590,AT5G20060,AT4G14200,AT1G68100,AT4G16250,AT4G35150,AT5G13260,AT1G62520,AT1G64460,AT5G67600,AT4G02580,AT3G11590,AT4G39880,AT5G62500,AT5G67490,AT3G58650,AT5G66390,AT1G09980,AT1G68940,AT3G63200,AT3G10770,AT3G59220,AT1G18480,AT5G45560,AT4G08980,AT3G04120,AT1G05770,AT3G57330,AT1G01800,AT2G16800,AT4G17486,AT5G47410,AT4G00585,AT2G24430,AT1G71020,AT3G62920,AT3G03970,AT1G64520,AT3G58670,AT3G54010,AT4G23510,AT3G24180,AT3G55410,AT1G25570,AT4G39830,AT2G46230,AT1G67320,AT1G10750,AT1G63660,AT5G15550,AT5G66760,AT1G34770,AT1G54790,AT3G02420,AT4G26650,AT4G14420,AT1G56080,AT5G40660,AT5G10020,AT3G58540,AT4G33160,AT5G57300,AT1G28395,AT4G38680,AT1G09960,AT1G76740,AT2G47690,AT3G19960,AT3G24040,AT4G30760,AT5G37510,AT3G47400,AT1G55940,AT1G20770,AT4G14330,AT1G27610,AT3G48150,AT5G13100,AT1G19950,AT3G06740,AT3G14150,AT2G19930,AT1G76780,AT5G44180,AT4G35830,AT5G22000,AT5G44050,AT5G13980,AT1G75450,AT5G40200,AT3G46690,AT5G12350,AT2G16580,AT2G16790,AT2G41520,AT1G36050,AT2G47650,AT3G09670,AT4G39860,AT1G77700,AT1G69220,AT1G75200,AT1G05310,AT5G23610,AT4G30290,AT1G72790,AT3G02940,AT3G20830,AT3G12760,AT1G57700,AT3G19540,AT5G25590,AT5G63030,AT5G35620,AT3G30380,AT1G26100,AT1G04750,AT1G62420,AT4G29720,AT2G29050,AT1G45000,AT3G49690,AT2G40765,AT1G09390,AT2G15430,AT4G17270,AT3G11450,AT3G08580,AT2G41070,AT5G10400,AT4G29830,AT1G53850,AT4G36030,AT1G18640,AT3G63130,AT1G23480,AT3G25100,AT5G38610,AT5G50730,AT1G52980,AT1G47210,AT4G18890,AT2G01210,AT3G13920,AT1G64550,AT2G43420,AT1G57660,AT4G39790,AT5G60980,AT1G09760,AT2G41110,AT5G58220,AT3G47460,AT5G49560,AT5G12930,AT4G33250,AT4G23750,AT5G66200,AT3G18670,AT1G18450,AT3G03600,AT3G12860,AT5G54750,AT5G14030,AT1G20410,AT3G33520,AT3G49070,AT5G66410,AT1G11570,AT1G80530,AT3G53900,AT3G15357,AT4G28540,AT1G47380,AT5G60640,AT1G71100,AT2G28690,AT1G05760,AT4G22930,AT4G38750,AT5G15530,AT1G74050,AT5G08300,AT1G15750,AT3G03200,AT4G26120,AT5G15880,AT3G22660,AT3G14410,AT5G23540,AT1G26840,AT2G07170,AT1G76400,AT3G27740,AT5G03290,AT5G53560,AT3G01280,AT1G56110,AT5G57290,AT5G14080,AT3G18030,AT5G38310,AT5G62550,AT5G53280,AT2G44150,AT1G54960,AT3G05060,AT5G13280,AT3G03050,AT2G06510,AT1G48510,AT2G27590,AT5G07680,AT5G35730,AT3G57420,AT5G20860,AT2G26700,AT2G16600,AT1G64530,AT1G26240,AT2G31410,AT5G07130,AT4G25720,AT4G02860,AT5G42520,AT5G61865,AT5G12310,AT3G15800,AT4G23650,AT2G42290,AT5G05080,AT3G17350,AT4G02390,AT1G13570,AT3G55520,AT4G10890,AT1G77840,AT3G57860,AT5G09300,AT5G52200,AT1G10780,AT1G06900,AT4G29870,AT5G05850,AT3G09000,AT1G24310,AT5G54900,AT3G13190,AT5G06940,AT1G30570,AT1G58470,AT1G70660,AT5G11390,AT2G41500,AT1G04510,AT1G71920,AT1G61010,AT1G30740,AT3G61600,AT5G67240,AT5G11990,AT5G48760,AT5G65120,AT1G67950,AT3G62370,AT4G31180,AT5G19690,AT3G18520,AT1G66810,AT5G14620,AT3G11400,AT3G16830,AT1G31660,AT5G45600,AT5G19680,AT1G14180,AT3G56870,AT4G11420,AT4G11450,AT1G04410,AT5G51430,AT5G43980,AT1G03110,AT5G52720,AT1G62870,AT3G10220,AT1G19360,AT3G24350,AT4G38630,AT5G27000,AT5G25810,AT4G07410,AT4G24820,AT5G55940,AT1G08750,AT1G50575,AT1G17890,AT3G21140,AT5G56730,AT5G20090,AT1G51600,AT1G10950,AT5G09250,AT3G48570,AT4G20280,AT5G41950,AT4G30840,AT5G55830,AT3G18230,AT5G11640,AT1G14850,AT3G09735,AT3G24315,AT5G60820,AT5G58900,AT1G31280,AT4G31270,AT5G21060,AT1G12500,AT5G25510,AT4G18465,AT4G27210,AT1G18890,AT5G62380,AT4G14660,AT1G03590,AT3G02555,AT5G11280,AT2G43670,AT1G10850,AT1G06630,AT4G02730,AT4G26210,AT3G28730,AT3G48490,AT5G14050,AT1G51640,AT1G68630,AT3G18940,AT5G61690,AT5G28150,AT4G19185,AT1G03457,AT3G57080,AT5G49550,AT4G20390,AT3G13772,AT4G24330,AT5G58230,AT1G05370,AT1G58025,AT3G28150,AT3G57220,AT1G73730,AT5G52910,AT4G01710,AT5G11500,AT5G60280,AT1G44970,AT1G32310,AT1G75330,AT5G42560,AT4G01575,AT4G14840,AT4G20460,AT5G47210,AT2G47720,AT2G09990,AT5G66060,AT1G30000,AT3G23690,AT1G80640,AT5G14520,AT4G39920,AT4G25730,AT5G62880,AT1G34130,AT2G04650,AT1G28410,AT5G05680,AT1G02780,AT5G05660,AT4G20720,AT5G38840,AT5G05520,AT5G07960,AT1G07170,AT1G54610,AT1G79280,AT3G43300,AT5G25800,AT3G61440,AT1G04260,AT1G65650,AT1G12070,AT2G21800,AT3G57560,AT3G50190,AT3G08930,AT3G60660,AT3G24510,AT4G21110,AT1G06670,AT3G53160,AT3G01160,AT3G20920,AT3G13570,AT1G20870,AT5G13300,AT4G14720,AT2G36090,AT5G61770,AT2G17940,AT1G12910,AT4G03180,AT1G02080,AT4G28440,AT4G00310,AT3G62120,AT2G23210,AT3G60220,AT3G05750,AT2G27310,AT1G11090,AT5G63890,AT4G33865,AT3G05620,AT2G29210,AT4G37940,AT1G21700,AT3G09890,AT5G58630,AT4G05090,AT3G03590,AT1G50500,AT5G15610,AT3G07680,AT1G76140,AT1G04730,AT1G31470,AT1G33680,AT3G63480,AT1G20200 DEEKEN_AGROBACTERIUM_TUMORS/TUMOR-FREE-INFLORESCENCE-STALK_DN Down-regulated expressed genes of Agrobacterium tumefaciens(P<0.01_all)-induced Arabidopsis tumors versus tumor-free inflorescence stalk tissue. (Table S3 PubmedID:17172353) AT1G27070,AT2G04570,AT5G02250,AT4G33370,AT3G26990,AT3G44520,AT3G23600,AT4G04710,AT4G04880,AT5G24520,AT5G41920,AT5G58920,AT3G24954,AT1G73950,AT1G33490,AT3G58010,AT3G20620,AT4G32520,AT3G14010,AT1G56560,AT4G35510,AT1G27410,AT1G55520,AT1G17455,AT3G13410,AT5G25020,AT3G29400,AT5G14590,AT1G22930,AT1G80400,AT4G37880,AT5G06580,AT1G23360,AT5G61430,AT5G08510,AT3G08670,AT1G19700,AT4G31540,AT3G12180,AT3G10370,AT5G38360,AT1G65410,AT1G10310,AT3G60720,AT2G03500,AT1G80010,AT5G08500,AT3G23610,AT1G02660,AT2G26890,AT1G63770,AT4G14190,AT4G07390,AT5G61670,AT4G23320,AT3G46480,AT5G13030,AT2G05755,AT4G17640,AT3G14700,AT5G16820,AT4G33240,AT1G73920,AT2G44650,AT5G27630,AT3G13490,AT3G11150,AT5G06600,AT5G41350,AT5G24670,AT2G36750,AT1G11180,AT5G13050,AT3G27580,AT1G78620,AT1G66070,AT5G24170,AT5G05630,AT5G52550,AT1G31420,AT3G11950,AT1G77410,AT5G53020,AT2G42770,AT4G24150,AT1G17770,AT1G50950,AT1G01970,AT3G43540,AT4G29890,AT4G09720,AT3G08020,AT3G21360,AT5G03070,AT1G56610,AT1G03520,AT2G39290,AT5G50780,AT5G44160,AT5G11730,AT1G05400,AT4G18370,AT4G33480,AT4G36550,AT4G33080,AT2G41980,AT3G20070,AT3G19420,AT2G39840,AT4G22750,AT3G50560,AT3G47080,AT3G01910,AT5G61040,AT4G10470,AT2G29290,AT5G49610,AT1G76960,AT5G03420,AT2G42330,AT5G10960,AT1G33340,AT3G16175,AT4G36600,AT1G50600,AT3G05410,AT4G17970,AT1G76350,AT4G18980,AT5G14270,AT1G06060,AT1G66230,AT2G42070,AT4G02430,AT1G12710,AT2G29590,AT5G47840,AT4G18530,AT4G13020,AT3G20230,AT2G45150,AT1G02140,AT1G71820,AT5G57170,AT3G20500,AT3G55390,AT1G28320,AT5G57140,AT5G02380,AT5G66470,AT1G01420,AT4G08280,AT3G47290,AT2G04360,AT5G27290,AT1G69390,AT5G08740,AT1G06200,AT3G05190,AT3G55830,AT4G00500,AT1G08190,AT1G53450,AT5G59180,AT1G50400,AT5G11700,AT5G56130,AT3G18750,AT4G17360,AT5G64280,AT5G55580,AT3G22530,AT1G16040,AT3G09970,AT1G59950,AT4G20370,AT2G03810,AT4G04350,AT5G64990,AT1G64350,AT1G73470,AT5G25990,AT4G17250,AT5G35840,AT5G60860,AT5G11770,AT4G27380,AT5G44060,AT4G00760,AT4G35860,AT3G46920,AT5G17060,AT5G62200,AT4G35470,AT3G56260,AT4G25020,AT3G07910,AT5G56910,AT4G29500,AT4G20820,AT3G29390,AT4G14540,AT1G01830,AT2G33430,AT5G46560,AT5G06410,AT1G56050,AT4G01010,AT3G52950,AT5G19490,AT1G75980,AT3G20910,AT1G69330,AT3G21865,AT1G10660,AT1G77850,AT5G40970,AT5G11480,AT3G46000,AT2G02410,AT5G19040,AT4G14240,AT2G20100,AT4G34710,AT5G63770,AT1G04960,AT3G57430,AT5G48730,AT4G29120,AT5G12200,AT5G66630,AT3G07940,AT4G38380,AT2G31400,AT3G25990,AT3G16090,AT2G21120,AT3G06200,AT1G53210,AT5G04440,AT3G26000,AT1G23400,AT4G10170,AT5G45610,AT3G15760,AT4G29750,AT1G78210,AT4G04750,AT1G35730,AT4G14780,AT1G12730,AT4G18905,AT1G61990,AT5G18640,AT1G06820,AT2G36430,AT1G65070,AT3G03860,AT1G05230,AT1G52550,AT3G54290,AT2G01220,AT2G48070,AT3G63260,AT1G12140,AT2G19450,AT4G15110,AT3G20930,AT5G47900,AT5G54630,AT1G63610,AT4G13800,ATCG00380,AT4G23100,AT5G12840,AT5G07900,AT3G46020,AT3G60590,AT4G39960,AT3G59280,AT2G31070,AT1G24040,AT2G40420,AT3G15890,AT3G19490,AT1G05900,AT4G36390,AT1G26670,AT1G02820,AT1G67600,AT3G28950,AT4G15660,AT3G49560,AT2G24060,AT2G19850,AT4G12060,AT2G33450,AT3G07560,AT5G65610,AT5G63310,AT1G21360,AT4G37380,AT1G79900,AT2G41880,AT4G26980,AT4G21350,AT5G24650,AT5G62650,AT5G01950,AT5G06480,AT1G02460,AT4G17570,AT4G18520,AT3G58970,AT2G37450,AT5G11580,AT5G64730,AT1G78010,AT5G64090,AT4G32060,AT3G15580,AT1G53160,AT4G35240,AT1G08540,AT5G51740,AT2G20860,AT4G21550,AT1G64810,AT1G33330,AT5G52440,AT2G04305,AT4G00390,AT1G73710,AT3G12730,AT3G01310,AT1G71870,AT4G18740,AT1G15280,AT2G02020,AT5G26600,AT1G31790,AT5G44410,AT1G30220,AT1G08640,AT2G43950,AT3G14110,AT2G06010,AT3G16800,AT4G21326,AT3G46930,AT1G33810,AT1G15340,AT3G11880,AT2G31530,AT5G45390,AT3G61700,AT2G46720,AT5G50800,AT5G56260,AT1G10920,AT4G31450,AT3G47780,AT1G54080,AT3G18060,AT4G30600,AT4G33960,AT3G23050,AT3G60350,AT1G24490,AT4G15550,AT2G40810,AT1G06510,AT1G20810,AT1G30910,AT5G03030,AT5G10750,AT4G39740,AT3G19290,AT1G13990,AT3G50500,AT3G51880,AT3G04310,AT1G31160,AT3G10670,AT3G44380,AT1G76120,AT5G06265,AT3G58170,AT1G60990,AT5G03940,AT5G37680,AT1G14580,AT1G74410,AT5G09670,AT3G02980,AT3G51140,AT5G63050,AT1G51610,AT4G09560,AT3G25585,AT4G22830,AT5G62470,AT3G46900,AT5G58200,AT3G04350,ATCG01310,AT1G27510,AT4G32530,AT1G16080,AT2G32500,AT1G31190,AT1G71340,AT1G10510,AT5G06850,AT4G18880,AT1G69010,AT5G21070,AT2G16400,AT3G15770,AT4G14230,AT1G22370,AT2G44310,AT4G16390,AT1G31070,AT3G56650,AT1G28190,AT5G42890,AT5G42765,AT2G07180,AT3G05370,AT3G60370,AT3G26440,AT4G17370,AT3G02130,AT2G45630,AT3G49160,AT4G34490,AT4G08500,AT2G25310,AT5G19590,AT3G11745,AT4G29700,AT3G05900,AT1G66200,AT2G41040,AT3G50210,AT1G01080,AT4G11840,AT2G41210,AT3G05500,AT5G52430,AT4G17245,AT4G34460,AT4G23640,AT4G40010,AT1G70230,AT4G13150,AT4G20010,AT2G46270,AT2G19350,AT5G39590,AT4G00355,AT1G15140,AT5G07920,AT1G67660,AT3G16850,AT3G59530,AT5G37070,AT1G16170,AT3G52710,AT3G17020,AT1G21760,AT5G03370,AT3G07020,AT4G16360,AT2G17270,AT2G32160,AT3G22104,AT5G46250,AT1G22540,AT3G28007,AT5G66160,AT1G15960,AT1G07080,AT3G01350,AT2G19830,AT3G21080,AT1G60060,AT2G01600,AT2G17033,AT3G26630,AT2G01490,AT3G24760,AT4G32350,AT5G11250,AT5G59250,AT2G26830,AT5G53140,AT1G71720,AT1G80800,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AT1G23970,AT5G15410,AT5G57040,AT4G18810,AT5G38420,AT4G20360,AT1G07010,AT1G75350,AT4G20070,AT1G79520,AT5G07330,AT5G07020,AT1G22500,AT5G51720,AT1G02475,AT4G23570,AT5G56850,AT3G04550,AT1G35350,AT5G38510,AT4G01150,AT2G46450,AT1G79510,AT4G21860,AT3G56730,AT4G12800,AT1G45474,AT1G76130,AT3G63490,AT5G33290,AT3G14280,AT3G27110,ATCG00330,AT3G01440,AT4G16410,AT5G28300,AT5G38990,AT3G05165,AT2G05540,AT3G46970,ATCG00130,AT1G61740,AT4G31240,AT4G27800,AT3G12780,AT4G26850,AT3G56200,AT4G00730,AT4G38840,AT2G40100,AT5G51110,AT1G55480,AT1G69840,AT2G12400,AT4G34190,AT4G30530,AT1G08380,AT1G03130,AT4G09650,AT5G67390,AT2G26500,AT2G27500,AT5G13650,AT3G51510,AT4G05590,AT5G25890,AT3G63520,AT2G35940,AT2G05310,AT2G31110,AT2G35290,AT1G70820,AT4G04770,AT5G23750,AT2G31800,AT3G11090,AT5G23920,AT4G33000,AT2G47910,AT2G32290,AT1G76820,AT1G61660,AT3G13062,AT3G44880,AT2G21640,AT1G76450,ATCG01070,AT5G05280,AT1G12900,AT3G23340,AT1G76825,AT5G10695,AT2G28720,AT4G34980,AT3G54140,AT1G74660,AT3G61080,AT2G30950,AT3G06070,AT5G28080,AT1G28140,AT1G63190,AT3G53280,AT1G66970,AT3G21760,AT5G14060,AT5G35170,AT3G27020,AT2G37540,AT1G31170,AT2G02080,AT3G03190,AT3G55630,AT5G57710,AT3G05650,AT3G27925,AT2G04030,AT4G17550,AT3G55130,AT4G00360,AT1G62780,AT4G29670,AT1G30530,AT4G13010,AT4G27820,AT1G27480,AT3G26740,AT5G63800,AT1G05190,AT5G05600,AT5G60850,AT5G40450,AT1G80310,AT4G28080,AT4G30470,AT5G37500,AT3G52150,AT2G33810,AT4G15545,AT4G03280,AT2G03310,AT5G50160,AT4G36870,AT2G40460,AT3G12750,AT3G56080,AT5G57345,AT1G52800,AT1G79040,AT2G46420,AT5G65280,ATCG00710,AT5G57180,AT2G44920,AT2G46820,AT3G17790,AT2G24820,AT2G38790,ATCG00420,AT3G15353,ATCG00600,AT4G11320,AT2G26250,AT3G63210,AT5G04950,AT4G23890,AT1G71030,AT3G61880,ATCG00440,AT5G09440,AT4G04640,AT1G35750,AT1G60190,AT4G28750,AT1G61310,AT1G17870,ATCG00300,AT2G34810,AT1G49230,AT1G19715,AT5G52420,AT2G46650,AT1G20440,AT4G39970,AT2G21960,AT5G43850,ATCG01060,AT1G69730,AT2G38640,AT3G53720,AT2G31040,AT4G32260,AT3G22370,AT5G61420,AT1G54780,AT3G47430,AT1G59700,AT2G40880,AT1G68660,AT2G14750,AT2G05620,AT1G32520,AT5G59080,AT2G46600,AT3G26580,AT1G20340,AT2G26900,AT5G25110,ATCG01080,AT1G65230,AT1G30760,AT2G40900,AT1G60960,AT2G32880,AT5G15450,AT5G28020,AT3G26510,AT3G19800,AT1G22160,AT1G52880,AT3G63110,AT4G16000,AT2G34860,AT4G28740,ATCG00140,AT5G65040,AT2G42690,AT3G26300,AT1G64710,AT3G56290,AT5G66190,AT1G70700,AT3G48200,AT2G42600,AT4G37760,AT1G05010,AT3G46780,AT1G49310,AT1G13930,AT2G21970,AT5G66400,AT1G74090,AT2G42530,AT1G18880,AT5G09990,AT3G47650,AT3G03870,AT4G26700,AT2G15580,AT1G53560,AT2G27360,AT4G39940,AT5G02790,AT1G71480,AT2G23840,AT5G44190,AT4G25700,AT5G23810,AT1G64970,AT2G22970,AT5G61520,AT1G50250,AT3G27210,AT1G19150,AT5G35630,AT5G43440,ATCG00020,AT3G45140,AT4G27030,AT4G25000,AT1G01070,AT1G28610,AT1G16880,AT2G43660,AT5G54940,AT5G37600,AT5G61820,AT1G79270,AT1G07500,ATCG00690,AT1G74880,AT1G78970,AT4G04460,AT5G42270,AT2G38090,AT5G01220,AT2G42760,AT3G19030,AT5G64040,AT1G01320,AT3G50820,AT5G43180,AT1G23090,AT1G29050,AT5G45890,AT5G58310,AT4G31330,AT1G09140,AT5G57800,AT1G64770,AT2G03710,AT1G21460,AT4G18210,AT2G44745,AT5G43750,AT1G18710,AT5G60600,AT2G47600,AT5G25140,AT3G61210,AT5G45380,AT3G23920,AT3G15360,AT5G19875,AT2G39470,AT3G26170,AT4G31500,AT1G52400,AT1G18590,AT5G02120,AT3G59060,AT3G22890,AT2G44210,AT4G23493,AT1G72030,AT5G63710,AT2G28900,AT2G29120,AT4G31870,AT2G24762,AT1G23040,AT4G10310,AT3G63160,AT2G28400,AT4G24450,AT3G28360,AT1G55110,AT1G03630,AT1G32640,AT4G20260,AT3G02730,AT1G73630,AT4G37200,AT2G39920,AT3G23410,AT4G15490,AT3G48420,AT4G28530,AT4G12030,AT4G19420,AT2G36145,ATCG00680,AT1G68570,AT4G33660,AT5G64770,AT1G68270,AT5G10380,AT4G04330,AT1G17710,AT3G47960,AT2G41870,AT1G62560,AT1G80760,AT5G61660,AT1G21250,AT4G05180,ATCG00350,AT3G17930,AT1G32560,AT1G64500,AT5G50260,AT4G02920,AT1G17840,AT3G23400,AT3G22210,AT5G04230,AT4G26530,AT1G10960,AT1G22690,AT4G03400,AT2G43550,AT1G67360,AT5G60910,AT4G24000,AT4G11960,AT4G01070,AT2G29320,AT5G45650,AT2G04039,AT5G36940,AT2G25510,AT2G31790,AT1G12250,AT3G43930,AT1G51110,AT5G52320,AT1G31820,ATCG00280,AT5G58260,AT1G78780,AT5G55050,AT3G05690,AT1G23740,AT4G10300,AT4G24120,AT1G29395,AT1G18730,AT2G22240,AT3G57540,AT2G29670,AT4G21210,AT5G45800,AT3G53960,AT3G53310,AT5G47560,AT3G51895,ATCG00270,AT4G12470,AT1G23310,AT1G64680,AT1G28230,AT1G03680,AT5G06510,AT2G03750,AT1G52410,AT2G43530,AT5G18130,AT5G24120,AT1G07280,AT3G53230,AT4G33420,AT4G21650,AT2G03550,AT4G22890,AT1G73680,AT1G75460,AT1G15980,AT4G17090,AT2G45740,AT5G65870,AT2G17040,AT2G21730,AT1G66390,AT3G05950,AT3G03470,AT2G25450,AT1G11080,AT5G53420,AT1G62760,AT1G56650,AT1G62750,AT5G63410,AT5G67370,AT1G14150,AT1G16400,AT1G05300,AT3G27170,AT1G70760,AT3G22740,AT1G02300,AT1G75820,AT1G21890,AT5G55620,AT4G08300,AT1G56300,AT2G47880,AT5G16570,AT4G19840,AT1G42550,AT1G52810,AT3G14560,AT4G37560,AT1G17100,AT1G76080,AT1G32060,AT5G44580,AT1G28600,AT4G32340,AT5G10930,AT1G52870,AT4G10120,AT4G22240,AT3G50440,AT5G37670,AT3G26280,AT5G24160,AT2G01890,AT3G19550,AT1G11700,AT3G25690,AT5G54250,AT1G73330,AT1G52000,AT5G20700,AT1G11530,AT1G73040,AT5G59780,AT3G58990,AT2G42540,AT1G30260,AT5G52780,AT1G34060,AT2G45180,AT2G43100,AT5G25450,AT3G63140,AT1G07720,AT1G51805,AT1G24575,AT2G38170,AT1G32080,AT2G35820,AT4G12290,AT5G54770,AT5G20280,AT4G10380,AT1G62360,AT3G51600,AT4G00880,AT4G33010,AT1G80170,AT4G01390,AT3G26960,AT1G44575,AT1G65480,AT2G26690,AT5G38710,AT2G20340,AT2G39850,AT1G68600,AT2G35370,AT3G46130,AT1G04350,AT3G45780,AT1G44800,AT5G17860,AT4G17340,AT4G30460,AT1G01140,AT2G29630,AT4G39800,AT5G09220,AT1G06460,AT4G37930,AT5G58770,AT3G55800,AT2G19310,AT5G38980,AT5G17170,AT1G70890,AT4G30450,AT2G39730,AT3G26290,AT4G33040,AT3G51420,AT5G36700,AT1G20160,AT3G54050,AT4G35090,AT1G07440,AT1G78450,AT1G19670,AT2G22980,AT4G37430,AT4G22200,AT4G04830,AT1G09340,AT1G42970,AT1G32900,AT2G37900,AT5G49630,AT5G23660,AT4G30110,AT5G53870,AT3G47070,AT1G56600,AT4G09890,AT1G64780,AT5G04140,AT1G67860,AT1G20020,AT4G19170,AT3G53980,AT1G48750,AT1G65490,AT3G48740,AT1G54040,AT3G62960,AT1G78020,AT2G39330,AT5G07460,AT2G41090,AT1G78370,AT1G12240,AT3G62410,AT5G59320,AT5G14740,AT3G21670,AT1G64360,AT4G27300,AT3G28270,AT5G62680,AT3G01500,AT4G15440,AT5G49730,AT5G23010,AT1G80130,AT1G68530,AT2G13360,AT1G69870,AT1G68010,AT4G00780,AT5G25610,AT2G24270,AT1G64370,AT2G22990,AT2G21330,AT3G14420,AT2G33380,AT3G62550,AT5G09660,AT4G38970,AT3G15840,AT1G09310,AT1G67865,AT1G67870,AT5G59310,AT4G13770,AT3G19710 DEEKEN_CATEGORIES_AGROBACTERIUM_TUMORS/TUMOR-FREE-INFLORESCENCE-STALK_UP Up-regulated expressed genes of Agrobacterium tumefaciens (P<0.01 + functional categories)-induced Arabidopsis tumors versus tumor-free inflorescence stalk tissue. (Table S3 PubmedID:17172353) AT2G23170,AT2G38380,AT4G10270,AT5G54510,AT5G39150,AT1G43800,AT4G36430,AT4G33070,AT2G16060,AT2G43610,AT5G56970,AT3G43190,AT1G69530,AT4G21680,AT4G08770,AT1G66270,AT2G30770,AT1G73260,AT3G29970,AT3G13650,AT1G69880,AT2G19970,AT3G15950,AT3G54820,AT1G78860,AT5G15230,AT4G37410,AT2G47260,AT1G17170,AT1G59740,AT3G26830,AT1G14890,AT1G22440,AT3G13790,AT2G38530,AT2G19990,AT3G13310,AT1G31320,AT5G48070,AT3G02550,AT5G38020,AT5G60200,AT5G39100,AT3G22120,AT3G16460,AT3G09270,AT3G13610,AT4G30410,AT5G25190,AT2G06850,AT4G35350,AT2G29980,AT1G62770,AT2G02120,AT5G12330,AT3G43430,AT1G30700,AT3G26770,AT3G10080,AT2G41510,AT2G13820,AT2G15120,AT1G11580,AT1G70710,AT5G55250,AT2G23540,AT2G02100,AT2G29490,AT2G39310,AT4G13660,AT2G17820,AT2G17850,AT2G22420,AT4G31840,AT5G17760,AT3G45060,AT4G08780,AT1G64160,AT3G21770,AT5G65360,AT1G76470,AT1G76790,AT5G06730,AT1G18250,AT2G02130,AT1G66700,AT1G01620,AT2G44830,AT5G20830,AT3G21420,AT2G31180,AT1G61360,AT4G23690,AT5G17330,AT3G02790,AT1G62300,AT3G02885,AT5G53320,AT1G28290,AT2G18370,AT4G37390,AT1G23870,AT5G59870,AT4G18910,AT4G24780,AT1G71380,AT1G76930,AT5G07440,AT1G28130,AT2G31390,AT1G02730,AT1G09200,AT1G01010,AT4G14930,AT1G26930,AT1G09460,AT2G18700,AT2G28660,AT3G51670,AT1G19850,AT1G30820,AT1G04250,AT4G27450,AT2G19590,AT3G19390,AT1G76410,AT3G61820,AT3G10040,AT5G25160,AT5G43580,AT1G05260,AT2G46140,AT2G29440,AT4G11650,AT2G18140,AT1G05710,AT1G68470,AT5G05340,AT1G77120,AT3G54560,AT5G20250,AT5G22920,AT4G19810,AT4G33720,AT1G68360,AT1G30730,AT5G19550,AT1G74670,AT3G22600,AT5G24760,AT3G22620,AT2G47860,AT3G15450,AT1G11670,AT4G30020,AT3G30775,AT1G03850,AT1G26770,AT2G30500,AT1G71830,AT1G01300,AT3G57040,AT3G25730,AT3G62100,AT4G23800,AT4G02290,AT2G35930,AT2G47550,AT2G34710,AT1G74030,AT3G58550,AT5G19120,AT4G34160,AT4G27970,AT5G13330,AT5G47370,AT1G74010,AT3G12500,AT1G16530,AT1G63180,AT1G60730,AT1G68320,AT1G36060,AT4G36670,AT3G54150,AT1G06180,AT5G06860,AT1G43910,AT5G60950,AT3G14680,AT1G15520,AT3G53480,AT3G53190,AT1G78060,AT2G29470,AT2G01520,AT2G26650,AT5G13080,AT5G05860,AT3G07410,AT5G06870,AT4G37610,AT2G36080,AT1G71695,AT1G23470,AT2G28950,AT5G03260,AT5G42830,AT2G25060,AT2G47270,AT1G18970,AT1G70500,AT4G34220,AT1G67830,AT3G13520,AT4G13210,AT1G74460,AT2G29550,AT2G29460,AT5G23350,AT5G46700,AT1G26730,AT3G60140,AT2G16660,AT1G08560,AT3G22790,AT2G28790,AT1G26380,AT4G09030,AT1G21310,AT2G01430,AT3G52340,AT3G04670,AT5G61890,AT2G14100,AT5G13370,AT1G14290,AT1G02850,AT1G16920,AT1G12000,AT5G22740,AT2G02930,AT4G13235,AT1G28110,AT2G39350,AT5G58860,AT5G10390,AT5G53890,AT5G10510,AT4G26260,AT5G20820,AT4G20320,AT1G30100,AT3G03660,AT1G01900,AT5G05730,AT5G24090,AT4G28640,AT3G18280,AT3G01970,AT1G59960,AT1G06550,AT1G68850,AT1G66880,AT1G03090,AT4G34750,AT3G23240,AT1G35140,AT2G29480,AT5G51890,AT2G39660,AT1G63440,AT3G12830,AT2G48140,AT1G18980,AT2G26290,AT1G21120,AT3G52870,AT3G04000,AT3G27060,AT1G02360,AT3G61850,AT3G19930,AT4G37750,AT1G02640,AT3G17420,AT1G29160,AT1G47670,AT3G23030,AT4G11480,AT2G31360,AT5G03680,AT4G30190,AT5G61440,AT4G31000,AT2G36910,AT3G18130,AT1G74020,AT2G26710,AT1G73640,AT2G04780,AT5G22570,AT1G19050,AT4G34131,AT1G74590,AT5G44380,AT1G33590,AT5G01890,AT5G66700,AT5G45280,AT1G60030,AT1G20850,AT2G26300,AT2G15760,AT4G26870,AT3G51030,AT5G18670,AT3G19350,AT1G15210,AT1G57560,AT1G56150,AT5G24580,AT5G65510,AT3G24120,AT1G55020,AT4G14630,AT4G36180,AT1G07370,AT4G27590,AT5G38530,AT1G62290,AT2G34650,AT4G32880,AT1G62790,AT1G66580,AT5G26200,AT3G27220,AT2G47520,AT1G33790,AT2G19800,AT2G27130,AT1G32170,AT1G71697,AT3G53620,AT1G54000,AT2G45290,AT5G47060,AT1G74000,AT5G15490,AT5G39610,AT5G63400,AT1G55610,AT5G49460,AT1G78830,AT1G02920,AT4G38660,AT4G26760,AT1G25530,AT3G04570,AT2G34300,AT4G19410,AT5G48800,AT5G22440,AT2G18550,AT5G49620,AT1G79530,AT1G51420,AT5G64410,AT5G05160,AT2G37280,AT4G32280,AT3G28600,AT1G80730,AT3G26760,AT1G35580,AT5G62390,AT5G40990,AT1G01480,AT4G31700,AT1G72730,AT3G06850,AT2G04090,AT4G02280,AT3G44540,AT5G25930,AT5G13290,AT5G41180,AT3G54110,AT1G14040,AT2G30750,AT3G16340,AT4G31820,AT2G47000,AT5G17490,AT5G52650,AT1G09780,AT1G09560,AT4G37770,AT5G28050,AT4G22770,AT4G08950,AT2G46710,AT3G23150,AT2G40540,AT2G41690,AT2G24010,AT4G38470,AT1G23410,AT5G57390,AT1G07770,AT3G23830,AT2G40940,AT1G69700,AT5G49450,AT3G29810,AT1G44900,AT5G40540,AT2G23050,AT1G18370,AT2G26560,AT4G39230,AT5G37690,AT2G39220,AT5G10820,AT4G02060,AT4G30650,AT4G22730,AT5G17300,AT2G01140,AT5G61740,AT5G44480,AT5G48230,AT5G56580,AT2G16440,AT1G02220,AT1G72680,AT5G46280,AT4G29190,AT3G54250,AT1G11130,AT2G23320,AT5G55480,AT5G43060,AT1G50490,AT2G38860,AT4G37370,AT4G37540,AT4G20830,AT3G56340,AT2G44130,AT3G02560,AT3G57550,AT2G31900,AT5G43810,AT1G72140,AT5G15160,AT5G66690,AT4G29270,AT5G33300,AT5G09800,AT5G66750,AT4G10260,AT3G45610,AT4G25810,AT3G14370,AT1G06120,AT3G14600,AT3G28510,AT3G48100,AT4G22530,AT4G24860,AT5G62690,AT4G24430,AT1G30440,AT3G17820,AT2G21100,AT5G03790,AT2G46930,AT1G44170,AT5G56670,AT1G74790,AT3G23890,AT5G15350,AT3G54030,AT5G10540,AT1G64660,AT1G15930,AT5G56710,AT1G60740,AT3G22930,AT2G27140,AT5G44560,AT4G11470,AT2G30210,AT5G26710,AT1G22780,AT1G46264,AT5G44730,AT3G21240,AT5G39320,AT5G05390,AT1G69930,AT5G08350,AT5G14510,AT5G18470,AT5G42720,AT3G04840,AT1G80820,AT4G39660,AT3G19910,AT5G49690,AT2G43000,AT5G14450,AT5G54130,AT2G48130,AT5G59290,AT3G14310,AT3G43600,AT5G44340,AT2G34060,AT4G39030,AT3G19820,AT1G18670,AT5G40760,AT5G27920,AT5G64760,AT3G07320,AT3G57030,AT5G66460,AT5G48110,AT1G10540,AT5G20550,AT5G23400,AT1G27400,AT5G66170,AT5G10520,AT3G22060,AT5G16000,AT3G14610,AT1G60390,AT5G58420,AT2G16850,AT5G07870,AT2G29890,AT2G36200,AT2G25210,AT1G54450,AT3G06030,AT2G34140,AT4G38210,AT4G29410,AT2G43360,AT1G14730,AT2G27040,AT5G38110,AT3G60130,AT5G60780,AT4G33360,AT1G66570,AT5G64340,AT1G20950,AT3G60245,AT3G48930,AT4G15000,AT2G01250,AT1G50010,AT5G39050,AT2G36620,AT3G21510,AT1G80590,AT5G13520,AT2G46590,AT1G73370,AT5G49700,AT3G53510,AT1G06840,AT5G47700,AT5G47930,AT2G38810,AT3G63440,AT1G18540,AT5G63680,AT4G37650,AT3G06350,AT2G40370,AT3G49670,AT4G35380,AT1G28390,AT3G19100,AT1G49580,AT4G05190,AT1G79180,AT1G44110,AT1G48850,AT4G17980,AT1G29310,AT1G69780,AT5G58700,AT1G18840,AT5G41060,AT3G51280,AT5G51560,AT2G18390,AT3G24450,AT1G23390,AT3G56370,AT1G25260,AT2G44120,AT5G24030,AT1G68400,AT1G63940,AT5G46590,AT3G53890,AT3G13560,AT3G15720,AT5G52280,AT1G09970,AT5G45750,AT1G12950,AT1G31290,AT2G21790,AT5G48000,AT3G49120,AT4G23430,AT3G48580,AT1G09570,AT3G26980,AT4G15910,AT3G07970,AT5G08570,AT1G63470,AT2G18400,AT1G26910,AT4G24040,AT3G55280,AT4G36160,AT1G71140,AT1G67000,AT5G15080,AT5G04770,AT1G60140,AT3G12490,AT3G11510,AT3G05560,AT3G46940,AT5G39660,AT3G54920,AT1G20930,AT2G35120,AT3G01790,AT2G37590,AT5G13910,AT1G63640,AT1G68840,AT3G09200,AT5G65790,AT5G41880,AT1G09840,AT3G24830,AT1G30620,AT5G23740,AT3G06700,AT1G56145,AT4G22130,AT1G08260,AT5G51600,AT5G60670,AT1G76310,AT5G19780,AT4G16480,AT1G69420,AT4G18710,AT1G30490,AT5G22500,AT5G48600,AT1G27620,AT2G40890,AT3G56490,AT5G01810,AT1G03905,AT4G34760,AT3G16520,AT1G53310,AT3G52090,AT5G58300,AT3G14940,AT1G35230,AT2G43590,AT3G02780,AT3G52490,AT5G15650,AT3G25520,AT1G54030,AT3G03920,AT3G44320,AT1G26450,AT4G26400,AT5G59970,AT5G13710,AT5G62260,AT1G09630,AT4G17390,AT3G17840,AT3G58700,AT1G29860,AT5G39740,AT3G53760,AT5G63590,AT3G09940,AT4G38620,AT5G26330,AT5G62710,AT1G26270,AT3G52430,AT3G52450,AT1G76540,AT3G46040,AT5G23000,AT3G28580,AT1G17350,AT5G13580,AT3G20570,AT1G67430,AT1G02530,AT2G22250,AT3G60250,AT3G16060,AT3G48850,AT3G02080,AT5G18620,AT1G07570,AT4G09460,AT5G56540,AT2G41540,AT3G06680,AT1G69620,AT5G19510,AT2G17630,AT5G65420,AT3G04920,AT1G09690,AT5G03300,AT5G02450,AT5G10360,AT1G61550,AT4G11080,AT1G74890,AT1G24440,AT5G20500,AT5G26340,AT1G14240,AT3G60490,AT5G59740,AT1G11790,AT5G47770,AT3G23250,AT4G35070,AT2G17370,AT5G54380,AT2G27000,AT1G75990,AT1G69920,AT4G17260,AT1G25320,AT1G65930,AT4G12390,AT4G03390,AT3G05890,AT3G53730,AT2G25880,AT5G59850,AT3G17590,AT5G54500,AT1G10670,AT3G28480,AT1G14260,AT5G64660,AT4G36920,AT1G33440,AT5G57970,AT4G36470,AT4G39050,AT1G04270,AT5G67100,AT2G41840,AT4G34870,AT1G48480,AT4G28950,AT2G34480,AT5G54230,AT5G06750,AT5G61000,AT3G06330,AT4G32830,AT3G50700,AT1G01060,AT5G53460,AT4G25835,AT5G62940,AT5G16070,AT3G58750,AT5G16130,AT3G22190,AT5G53090,AT2G22610,AT3G50400,AT2G02220,AT3G61310,AT4G25630,AT3G54180,AT2G29570,AT1G14210,AT1G75090,AT2G47560,AT1G41880,AT1G77590,AT3G09820,AT5G23140,AT5G23900,AT2G45470,AT5G64140,AT2G42620,AT5G63260,AT5G48460,AT3G25250,AT5G15520,AT2G43535,AT3G43270,AT2G24490,AT2G28350,AT5G61170,AT3G51950,AT1G04310,AT4G34200,AT4G23820,AT4G36260,AT1G48630,AT2G47610,AT2G42740,AT1G78050,AT3G29410,AT5G47730,AT4G34590,AT3G30300,AT3G59890,AT5G65670,AT3G06450,AT4G27270,AT2G45300,AT5G57330,AT1G60800,AT2G40610,AT4G16155,AT4G00950,AT3G13380,AT3G49910,AT4G20270,AT3G26460,AT4G10610,AT3G16780,AT2G27720,AT5G01340,AT1G32090,AT2G02850,AT3G28340,AT4G11010,AT4G18100,AT4G25500,AT2G07690,AT1G73270,AT3G27200,AT3G45980,AT4G14320,AT3G17090,AT1G10460,AT3G52580,AT5G45440,AT5G28060,AT1G08360,AT4G00230,AT3G44050,AT1G53440,AT1G26260,AT1G52760,AT1G50570,AT2G30150,AT1G79680,AT3G22800,AT1G15580,AT5G23720,AT4G03270,AT3G25980,AT1G69310,AT2G37190,AT3G15620,AT5G50720,AT3G10610,AT1G35260,AT5G60690,AT5G07090,AT5G51060,AT3G48440,AT1G77670,AT5G14420,AT2G46500,AT5G63930,AT1G24180,AT4G10450,AT5G53290,AT5G43990,AT3G20860,AT5G38480,AT1G75490,AT2G28260,AT5G28290,AT1G78770,AT3G09630,AT5G27850,AT1G66530,AT4G01960,AT5G58150,AT1G73250,AT3G47180,AT3G06410,AT2G22770,AT4G23410,AT5G26630,AT3G53180,AT1G25280,AT1G16490,AT1G34300,AT1G63480,AT5G57440,AT1G26190,AT1G77940,AT1G08650,AT5G62070,AT3G04880,AT4G23190,AT5G14800,AT5G67130,AT3G53020,AT3G59100,AT3G06140,AT4G26220,AT3G57150,AT1G30080,AT4G00960,AT1G53050,AT2G24170,AT1G02690,AT4G30280,AT3G20050,AT3G49010,AT1G64060,AT4G31100,AT5G57020,AT4G20430,AT3G59540,AT5G18550,AT1G76500,AT3G12390,AT5G19410,AT5G35580,AT3G57290,AT2G19730,AT1G70690,AT4G05520,AT5G03510,AT1G22180,AT5G07800,AT1G19230,AT3G52640,AT1G51650,AT2G22620,AT4G32890,AT5G58620,AT2G45340,AT3G15352,AT1G02840,AT1G33420,AT4G08690,AT1G02950,AT3G60770,AT5G13960,AT2G28210,AT1G13180,AT1G21980,AT2G44065,AT1G72370,AT5G18800,AT1G20050,AT5G17800,AT5G27470,AT2G33860,AT3G50900,AT4G22590,AT1G72250,AT3G60900,AT5G14650,AT1G12780,AT1G55840,AT1G11545,AT3G02360,AT3G19640,AT5G67270,AT1G76550,AT5G59845,AT4G02590,AT4G14350,AT1G61370,AT3G61110,AT2G32060,AT3G22780,AT1G19880,AT2G20360,AT1G17880,AT1G70170,AT5G07310,AT5G13850,AT4G17190,AT1G08970,AT2G17770,AT1G08050,AT5G15200,AT3G17360,AT3G11210,AT1G28440,AT3G45030,AT4G13940,AT3G47370,AT5G43430,AT1G56210,AT3G28860,AT1G06490,AT4G36740,AT2G02000,AT5G13900,AT3G14290,AT3G23750,AT3G07110,AT2G36530,AT4G00810,AT5G65460,AT5G19440,AT3G16280,AT2G46800,AT1G53660,AT4G33400,AT5G11520,AT4G30800,AT1G14810,AT5G67510,AT4G39200,AT3G14890,AT4G01580,AT1G07830,AT3G11520,AT1G01510,AT2G02170,AT1G80850,AT4G09510,AT4G16800,AT3G25150,AT1G76710,AT1G64880,AT5G13420,AT4G38900,AT5G39720,AT5G43830,AT4G15900,AT5G54200,AT4G12730,AT1G79210,AT1G80460,AT3G60630,AT2G22310,AT2G36930,AT4G16130,AT2G21580,AT3G23390,AT4G29480,AT4G11530,AT3G13700,AT3G22230,AT1G04870,AT5G16440,AT4G26230,AT4G37490,AT4G09420,AT5G08620,AT5G41000,AT1G01100,AT5G24400,AT1G53920,AT2G43460,AT5G52240,AT2G36890,AT5G20290,AT3G43810,AT1G03330,AT1G79500,AT2G18060,AT1G80660,AT3G16450,AT3G08680,AT1G80260,AT1G52300,AT5G44790,AT3G54960,AT1G55180,AT4G28050,AT2G04390,AT3G10050,AT4G30860,AT5G13460,AT2G36170,AT2G27060,AT1G70600,AT3G50000,AT5G67260,AT3G53430,AT1G08080,AT5G25090,AT1G26880,AT5G48450,AT5G02870,AT2G16780,AT5G53990,AT3G06040,AT3G62060,AT2G43140,AT4G38520,AT1G63160,AT1G63460,AT1G79820,AT3G14220,AT5G38640,AT5G05670,AT1G69810,AT4G23680,AT2G24850,AT4G31985,AT1G24625,AT1G18080,AT2G43150,AT3G61250,AT1G63020,AT3G10550,AT4G30170,AT2G36160,AT1G34030,AT1G27450,AT4G30935,AT2G45490,AT1G21720,AT1G64590,AT1G13980,AT5G13790,AT5G59240,AT3G11580,AT1G26250,AT5G50810,AT1G52340,AT1G10570,AT5G56720,AT1G79990,AT4G26610,AT3G28900,AT2G21060,AT5G41610,AT5G50000,AT3G52930,AT2G16390,AT5G17990,AT1G16510,AT1G22450,AT3G51310,AT5G49555,AT4G14060,AT5G56360,AT3G53350,AT5G58730,AT1G10550,AT1G04020,AT5G66120,AT1G79950,AT1G71930,AT1G04850,AT1G06390,AT4G26660,AT4G22610,AT5G47990,AT1G65290,AT1G07480,AT2G16700,AT4G00200,AT1G77750,AT1G67630,AT4G32400,AT3G50300,AT5G66560,AT1G29520,AT1G52930,AT3G51800,AT5G02140,AT2G40260,AT5G09770,AT3G62130,AT4G16610,AT3G14790,AT3G54690,AT5G04870,AT3G11500,AT5G66680,AT2G17720,AT2G26760,AT4G00990,AT1G55690,AT3G62870,AT5G12870,AT2G37270,AT3G02920,AT3G52300,AT5G01200,AT4G34670,AT3G56130,AT4G38130,AT3G57760,AT5G38630,AT1G49600,AT1G19710,AT4G37660,AT3G09810,AT5G43320,AT1G11680,AT3G53610,AT3G49390,AT3G18090,AT5G42350,AT5G01500,AT1G67930,AT3G13090,AT5G18230,AT5G16510,AT2G23380,AT5G20180,AT3G03980,AT2G30980,AT1G14510,AT1G15570,AT5G01930,AT3G43610,AT1G61770,AT3G43250,AT5G67200,AT5G50320,AT3G19300,AT2G18020,AT1G30630,AT1G24360,AT5G11980,AT1G31860,AT1G10700,AT3G62250,AT3G53870,AT4G14110,AT3G02990,AT5G52840,AT2G27530,AT5G51350,AT5G51910,AT5G01160,AT3G03220,AT1G43170,AT1G23190,AT2G47840,AT2G45200,AT5G59220,AT2G39390,AT1G14320,AT3G54990,AT1G07070,AT3G07050,AT1G24280,AT4G16120,AT3G06360,AT5G23910,AT4G03340,AT2G20300,AT3G60600,AT1G51940,AT4G10480,AT2G31730,AT4G14900,AT3G56480,AT3G11820,AT5G03860,AT1G60890,AT3G19130,AT5G46640,AT1G69770,AT1G07620,AT5G59560,AT5G27770,AT1G16340,AT5G27820,AT1G21750,AT1G20700,AT5G04160,AT2G38250,AT5G35740,AT1G72670,AT3G42950,AT5G05780,AT5G51460,AT1G78040,AT4G21270,AT1G12310,AT3G27070,AT2G21390,AT4G22050,AT3G11830,AT5G65970,AT5G18110,AT3G26720,AT5G47960,AT5G46290,AT5G35530,AT5G67250,AT5G60230,AT4G33520,AT3G45850,AT5G12440,AT4G37550,AT1G14900,AT4G22150,AT1G34670,AT1G63290,AT1G64190,AT5G48060,AT1G57870,AT2G45420,AT1G53490,AT1G54140,AT1G06960,AT1G13730,AT4G12250,AT2G15880,AT4G00100,AT2G42210,AT5G14130,AT1G74740,AT3G58610,AT1G15690,AT2G14900,AT4G11170,AT4G16720,AT1G01370,AT1G32210,AT3G17240,AT2G34180,AT1G10630,AT5G20890,AT5G52470,AT1G57630,AT3G52590,AT5G27240,AT5G07590,AT3G14360,AT1G13920,AT1G77720,AT3G46430,AT5G01190,AT1G47270,AT1G22800,AT5G09330,AT1G30400,AT5G20060,AT1G68100,AT4G16250,AT4G35150,AT1G64460,AT4G02580,AT4G39880,AT5G62500,AT5G66390,AT1G68940,AT3G63200,AT1G18480,AT4G08980,AT3G04120,AT1G05770,AT3G57330,AT1G01800,AT2G16800,AT2G24430,AT1G71020,AT1G64520,AT3G54010,AT4G23510,AT3G55410,AT4G39830,AT1G67320,AT1G10750,AT1G63660,AT5G66760,AT1G54790,AT5G40660,AT5G10020,AT4G33160,AT5G57300,AT4G38680,AT1G09960,AT2G47690,AT3G19960,AT3G24040,AT5G37510,AT3G47400,AT1G55940,AT4G14330,AT3G48150,AT1G19950,AT3G06740,AT3G14150,AT2G19930,AT5G44180,AT4G35830,AT5G22000,AT5G44050,AT5G13980,AT1G75450,AT5G40200,AT3G46690,AT5G12350,AT2G16580,AT2G16790,AT2G41520,AT2G47650,AT1G77700,AT1G69220,AT1G05310,AT4G30290,AT3G02940,AT3G20830,AT1G57700,AT5G63030,AT5G35620,AT1G26100,AT1G04750,AT4G29720,AT1G45000,AT3G49690,AT1G09390,AT2G15430,AT3G11450,AT3G08580,AT2G41070,AT5G10400,AT4G29830,AT1G53850,AT1G18640,AT3G63130,AT1G23480,AT3G25100,AT5G38610,AT1G52980,AT1G47210,AT4G18890,AT2G01210,AT3G13920,AT1G64550,AT2G43420,AT1G57660,AT5G60980,AT1G09760,AT2G41110,AT4G33250,AT4G23750,AT3G18670,AT1G18450,AT3G03600,AT3G12860,AT5G54750,AT3G33520,AT1G11570,AT1G80530,AT3G53900,AT4G28540,AT1G47380,AT5G60640,AT1G71100,AT1G05760,AT4G22930,AT5G15530,AT1G74050,AT5G08300,AT3G03200,AT4G26120,AT3G14410,AT5G23540,AT1G76400,AT3G27740,AT5G03290,AT3G01280,AT1G56110,AT5G57290,AT2G44150,AT1G54960,AT3G05060,AT5G13280,AT3G03050,AT2G06510,AT1G48510,AT5G07680,AT5G20860,AT2G26700,AT2G16600,AT1G64530,AT1G26240,AT5G07130,AT4G25720,AT5G12310,AT4G23650,AT2G42290,AT5G05080,AT4G02390,AT1G13570,AT1G77840,AT5G09300,AT1G10780,AT1G06900,AT5G54900,AT3G13190,AT5G06940,AT1G30570,AT1G58470,AT1G70660,AT2G41500,AT1G71920,AT1G61010,AT1G30740,AT5G67240,AT5G48760,AT4G31180,AT3G18520,AT1G66810,AT5G14620,AT3G11400,AT3G16830,AT5G19680,AT4G11420,AT1G04410,AT5G43980,AT3G10220,AT3G24350,AT4G38630,AT5G27000,AT5G25810,AT4G24820,AT1G08750,AT1G50575,AT1G17890,AT5G56730,AT1G51600,AT5G09250,AT3G48570,AT4G20280,AT4G30840,AT5G55830,AT1G14850,AT3G24315,AT5G60820,AT5G58900,AT1G31280,AT4G31270,AT5G21060,AT1G12500,AT5G25510,AT4G18465,AT4G27210,AT1G18890,AT5G62380,AT4G14660,AT1G03590,AT2G43670,AT1G10850,AT1G06630,AT4G26210,AT3G28730,AT5G61690,AT1G03457,AT3G57080,AT5G58230,AT1G58025,AT1G73730,AT4G01710,AT5G60280,AT1G44970,AT1G75330,AT5G42560,AT4G01575,AT4G20460,AT5G47210,AT2G09990,AT5G66060,AT3G23690,AT1G80640,AT5G14520,AT4G39920,AT4G25730,AT5G62880,AT1G34130,AT2G04650,AT5G05680,AT1G02780,AT5G05660,AT5G38840,AT1G54610,AT3G43300,AT5G25800,AT3G61440,AT1G65650,AT1G12070,AT3G57560,AT1G06670,AT3G53160,AT3G13570,AT5G13300,AT2G36090,AT5G61770,AT1G12910,AT1G02080,AT3G62120,AT2G23210,AT3G60220,AT2G27310,AT5G63890,AT4G33865,AT3G05620,AT2G29210,AT4G37940,AT1G21700,AT3G09890,AT4G05090,AT5G15610,AT3G07680,AT1G76140,AT1G04730,AT1G31470,AT3G63480,AT1G20200 DEEKEN_CATEGORIES_AGROBACTERIUM_TUMORS/TUMOR-FREE-INFLORESCENCE-STALK_DN Down-regulated expressed genes of Agrobacterium tumefaciens (P<0.01 + functional categories)-induced Arabidopsis tumors versus tumor-free inflorescence stalk tissue. (Table S3 PubmedID:17172353) AT1G27070,AT2G04570,AT5G02250,AT4G33370,AT3G44520,AT3G23600,AT4G04710,AT4G04880,AT5G24520,AT5G41920,AT1G73950,AT3G20620,AT4G32520,AT1G56560,AT1G27410,AT1G55520,AT5G14590,AT1G80400,AT4G37880,AT1G23360,AT5G61430,AT1G19700,AT4G31540,AT3G10370,AT1G65410,AT1G10310,AT3G60720,AT2G03500,AT1G80010,AT3G23610,AT1G02660,AT2G26890,AT1G63770,AT4G23320,AT3G46480,AT4G17640,AT5G16820,AT4G33240,AT1G73920,AT2G44650,AT5G27630,AT3G13490,AT5G06600,AT5G41350,AT5G24670,AT2G36750,AT1G11180,AT5G13050,AT3G27580,AT1G66070,AT5G05630,AT1G31420,AT3G11950,AT1G77410,AT1G17770,AT1G50950,AT4G29890,AT4G09720,AT3G08020,AT5G03070,AT1G56610,AT1G03520,AT2G39290,AT5G44160,AT4G18370,AT4G36550,AT4G33080,AT2G41980,AT3G19420,AT2G39840,AT4G22750,AT3G50560,AT3G01910,AT2G29290,AT5G49610,AT1G50600,AT1G76350,AT5G14270,AT1G66230,AT4G02430,AT1G12710,AT5G47840,AT4G13020,AT2G45150,AT3G20500,AT1G28320,AT5G57140,AT5G02380,AT1G01420,AT3G47290,AT5G08740,AT3G05190,AT3G55830,AT4G00500,AT5G59180,AT3G18750,AT5G64280,AT5G55580,AT3G22530,AT3G09970,AT1G59950,AT4G20370,AT4G04350,AT5G64990,AT5G35840,AT5G60860,AT5G11770,AT4G00760,AT4G35860,AT3G46920,AT5G17060,AT5G62200,AT4G29500,AT4G20820,AT4G14540,AT2G33430,AT5G06410,AT1G56050,AT4G01010,AT5G19490,AT3G20910,AT1G69330,AT1G77850,AT3G46000,AT5G19040,AT2G20100,AT4G34710,AT5G63770,AT4G29120,AT5G12200,AT3G07940,AT2G31400,AT3G25990,AT3G16090,AT3G06200,AT1G53210,AT3G26000,AT4G10170,AT4G04750,AT4G14780,AT1G12730,AT1G61990,AT5G18640,AT1G06820,AT1G65070,AT1G05230,AT3G63260,AT1G12140,AT2G19450,AT4G15110,AT5G54630,AT4G13800,ATCG00380,AT4G23100,AT5G12840,AT5G07900,AT3G46020,AT4G39960,AT2G31070,AT2G40420,AT3G15890,AT3G19490,AT1G05900,AT1G26670,AT1G02820,AT3G28950,AT4G15660,AT3G49560,AT2G24060,AT4G12060,AT2G33450,AT5G63310,AT1G79900,AT2G41880,AT4G21350,AT5G24650,AT5G01950,AT1G02460,AT4G17570,AT3G58970,AT2G37450,AT5G11580,AT1G78010,AT4G32060,AT3G15580,AT1G53160,AT1G08540,AT5G51740,AT2G20860,AT4G21550,AT1G33330,AT5G52440,AT2G04305,AT4G00390,AT3G12730,AT1G71870,AT2G02020,AT5G44410,AT1G30220,AT3G16800,AT4G21326,AT3G46930,AT1G15340,AT2G31530,AT5G45390,AT2G46720,AT5G50800,AT5G56260,AT1G10920,AT4G31450,AT3G47780,AT3G18060,AT4G30600,AT3G23050,AT3G60350,AT2G40810,AT1G20810,AT5G03030,AT3G19290,AT3G50500,AT3G51880,AT1G31160,AT3G10670,AT1G76120,AT5G03940,AT5G37680,AT1G14580,AT1G74410,AT1G51610,AT4G09560,AT3G25585,AT5G62470,AT3G46900,ATCG01310,AT4G32530,AT1G31190,AT1G71340,AT4G18880,AT1G69010,AT2G16400,AT1G22370,AT2G44310,AT4G16390,AT1G31070,AT3G56650,AT5G42890,AT2G07180,AT3G05370,AT3G60370,AT3G02130,AT2G45630,AT3G49160,AT4G34490,AT4G08500,AT4G29700,AT1G66200,AT3G50210,AT1G01080,AT4G11840,AT2G41210,AT4G17245,AT4G34460,AT4G23640,AT4G40010,AT2G46270,AT5G07920,AT3G16850,AT3G59530,AT3G17020,AT1G21760,AT5G03370,AT3G07020,AT4G16360,AT2G17270,AT3G22104,AT5G46250,AT1G22540,AT3G28007,AT5G66160,AT1G15960,AT3G01350,AT2G19830,AT3G21080,AT3G24760,AT5G11250,AT5G59250,AT2G26830,AT5G53140,AT1G71720,AT1G80800,AT2G04270,AT3G51830,AT2G42220,AT3G44890,AT4G37040,AT5G06130,AT3G57810,AT3G12520,AT1G48030,AT4G39850,AT4G01280,AT4G23920,AT1G79050,AT1G20696,AT2G24040,AT1G50460,AT1G77370,AT3G10230,AT5G62480,AT5G43920,AT1G10940,AT2G03140,AT3G55960,AT1G76040,AT5G40160,AT5G49840,ATCG00630,AT1G64950,AT5G57030,AT1G76920,AT1G75300,AT3G56910,AT3G56800,AT5G18340,AT1G29260,AT3G02050,AT5G34850,AT5G56150,AT1G29550,AT3G55640,AT2G29370,AT1G50440,AT1G66980,AT3G25190,AT2G28840,AT5G40930,AT2G47070,AT1G49010,AT1G62390,AT4G02340,AT4G20130,ATCG00860,AT4G19450,AT4G11110,AT1G54350,AT1G19660,AT4G39100,AT2G32390,AT1G69170,AT2G27190,AT3G28345,AT4G21750,AT4G30950,AT1G51550,AT4G04890,AT4G32270,AT1G69720,AT2G31660,AT4G33450,AT5G20480,AT3G18890,AT3G50270,AT3G29270,AT5G61560,AT2G13100,AT1G04140,AT1G34310,AT3G19470,AT3G21020,AT2G34960,AT2G21510,AT3G21220,AT1G66140,AT2G23200,AT5G11450,AT3G14650,AT1G18170,AT3G19580,AT5G44520,AT1G22530,AT1G74970,AT3G09920,AT4G05160,AT1G57770,AT4G16950,AT1G80030,AT1G79410,AT5G46860,AT5G01260,AT2G42010,AT1G04710,AT3G45260,AT5G13810,AT2G26870,AT1G67470,AT3G14270,AT5G18100,AT3G06950,AT4G00335,AT3G25740,AT5G14260,AT5G57630,AT5G47110,AT3G04605,AT1G01790,AT5G62020,AT5G59680,AT5G19220,AT5G17850,AT2G22360,AT1G27370,AT4G29220,AT1G62810,AT1G20620,AT5G39020,AT1G21590,AT2G32830,AT1G19770,AT4G17740,AT3G56940,AT2G38460,AT1G20880,AT3G53130,AT1G14920,AT5G10470,AT4G04850,AT1G76530,AT5G27280,AT2G01680,AT3G50940,AT4G00030,AT3G12040,AT4G22220,AT3G54220,AT2G35050,AT3G55110,ATCG00220,AT1G14030,AT2G27150,AT3G14440,AT1G03160,AT3G28100,AT2G44900,AT3G13120,AT1G12410,AT5G03555,AT4G00720,AT5G62360,AT1G76180,AT1G31330,AT5G58120,AT4G21910,AT3G47160,AT5G35220,AT5G36170,AT5G52010,AT4G38250,AT5G60470,AT3G09960,AT1G12280,AT5G28030,AT5G53480,AT1G76030,AT5G38290,AT5G52300,AT2G29090,AT4G02420,AT3G03720,AT5G10650,AT2G46910,AT5G48030,AT4G18240,AT1G11910,AT3G23790,AT3G56050,AT3G06210,AT5G24930,AT4G32770,AT5G03640,AT1G71330,AT1G77480,AT4G02600,AT1G71090,AT3G02750,AT1G01190,AT3G48460,AT1G11750,AT1G09420,AT5G58870,AT3G09770,AT2G15080,AT2G45910,AT5G09820,AT2G46530,AT1G67700,AT2G25760,AT5G06340,AT3G23970,AT1G17340,AT3G54430,AT1G03475,AT2G45650,AT1G55120,AT5G20220,AT5G59610,AT1G02305,AT1G32240,AT4G13430,AT5G51010,AT2G24940,AT5G48840,AT1G30270,AT1G68300,AT3G47600,AT5G64380,AT4G14570,AT5G46580,AT1G79930,AT1G16460,AT2G15390,AT5G52100,AT1G31812,AT5G02030,AT4G23730,AT2G17260,AT1G63800,AT1G78750,AT5G23440,ATCG00160,AT5G41700,AT5G58950,AT5G16540,AT1G10900,AT1G28200,AT1G51440,AT5G04170,AT3G24430,AT5G16140,AT1G05200,AT1G31800,AT1G07250,AT5G42390,AT1G60970,AT4G24280,AT5G33280,AT2G31820,AT5G57360,AT2G38290,AT2G05630,AT2G35500,AT2G21410,AT3G62660,AT2G38140,AT2G46250,AT5G16530,AT5G04360,AT2G45770,AT2G24090,AT5G51540,AT5G46110,AT2G44490,AT5G35700,AT3G53470,AT1G05140,AT3G08740,AT3G10350,AT5G40060,AT3G20300,AT5G09930,AT1G43560,AT1G44770,AT5G59130,AT1G73110,AT1G05170,AT5G49890,AT3G11750,AT4G17170,AT2G45820,AT5G55910,AT3G58680,AT3G50740,AT3G54900,AT5G13550,AT5G59300,AT1G29340,AT2G42590,AT2G36250,AT3G15690,AT5G55990,AT3G52800,AT2G26170,AT4G10770,AT5G08590,AT2G46340,AT5G64800,AT5G65220,AT4G36900,AT4G14710,AT2G32430,AT3G05630,AT2G20630,AT4G01840,AT1G17745,AT3G02540,AT4G14400,AT1G17970,AT5G27220,AT1G22340,AT1G67340,AT5G41800,AT4G13250,AT3G08870,AT2G21370,AT2G45530,AT1G05690,AT1G72830,AT4G01800,AT2G45670,AT1G51200,AT5G59540,AT4G03520,AT4G25960,AT4G18480,AT1G68670,AT1G51950,AT1G17460,AT2G35300,AT1G56430,AT5G67560,AT2G18350,AT3G62590,AT3G05180,AT1G67970,AT2G38330,AT2G43030,AT2G15620,AT2G41140,AT1G18750,AT5G17450,AT4G27480,AT5G61640,AT3G04870,AT5G57960,AT4G05110,AT4G14580,AT5G49940,AT1G12800,AT3G23280,AT4G16500,AT5G53350,AT5G04260,AT5G47630,AT3G45290,AT5G38240,AT4G22260,AT2G46660,AT5G62570,AT4G29100,AT5G16200,AT5G28010,AT4G34720,AT4G34620,AT5G58540,AT3G46530,AT2G24220,AT5G17310,AT5G51680,AT4G23160,AT2G31980,AT3G28080,AT5G47120,AT3G07630,AT4G33510,AT5G54660,AT3G21870,AT1G43620,AT1G08110,AT3G26744,AT4G36810,AT1G47128,AT4G26150,AT3G15260,AT5G48150,AT1G53090,AT3G25570,AT1G44750,AT4G33670,AT3G62010,AT1G62180,AT5G51970,AT1G09530,ATCG00050,AT5G13410,AT5G25130,AT5G39830,AT3G16140,AT3G47620,AT2G26740,AT3G11410,AT2G23760,AT5G20470,AT1G20510,AT3G06483,AT1G32410,AT3G26650,AT1G46768,AT4G30080,AT2G25610,AT4G25390,AT2G20180,AT2G16740,AT4G25970,AT5G46450,AT4G38340,AT3G24590,AT5G40170,AT2G30080,AT3G04110,AT4G24770,AT2G05870,AT2G24860,AT1G22050,AT2G35780,AT1G05940,ATCG00700,AT4G13510,ATCG00650,AT3G55290,AT2G18170,AT5G02560,AT3G50750,AT5G42760,AT4G26520,AT2G32090,AT3G63190,AT3G52380,AT4G05020,AT3G01100,AT2G38270,AT5G01530,ATCG00840,AT5G16560,AT1G64140,ATCG01020,AT4G29010,ATCG00480,AT1G48430,AT1G21240,AT3G08040,AT1G02270,AT1G32470,AT4G33500,AT1G17220,AT3G62700,AT2G25080,AT1G07640,AT2G20270,AT5G61810,AT4G02770,AT4G07670,AT3G07670,AT1G71710,AT5G65990,AT5G47330,AT1G08930,AT5G06690,AT2G22540,AT4G35270,AT2G32680,AT1G32550,AT4G17100,AT3G27300,AT1G78200,AT4G29210,AT5G04490,AT3G48730,AT5G24870,AT5G04590,AT3G14660,AT1G73870,AT4G09010,AT5G54290,AT1G66920,AT5G26820,AT3G09210,AT1G70410,AT1G55910,AT3G56090,AT5G11060,AT2G15040,AT1G64510,AT3G44620,AT5G24420,AT2G32260,AT2G24420,AT5G04220,AT2G29720,AT1G52230,AT5G59670,AT2G01170,AT3G54210,AT5G28840,AT1G77490,AT3G43790,ATCG00470,AT1G03550,AT4G01480,AT3G19553,AT3G51820,AT4G37400,AT1G21270,AT2G37920,AT4G13580,AT2G01910,AT5G39080,AT2G47240,AT1G35680,AT1G68540,AT1G43670,AT5G04900,AT3G26380,AT5G53170,AT3G54090,AT1G09795,AT3G16560,AT2G27990,AT1G33970,AT2G04066,AT2G18710,AT1G62430,AT4G39710,AT1G74680,AT5G08650,AT5G38780,AT3G19010,AT2G33735,AT4G38460,AT4G36710,AT3G26320,AT1G66330,AT3G25920,AT1G78630,AT1G75690,AT1G19450,AT5G05740,AT3G15510,AT1G55670,AT1G70790,AT1G02150,AT1G60950,AT3G51960,AT3G26900,AT2G45560,AT1G13950,AT5G27360,AT3G05350,AT2G36990,AT5G60450,AT2G24240,AT5G24210,AT1G69690,AT5G07580,AT1G07320,AT5G15850,AT1G76890,AT5G19140,AT1G30640,AT3G53420,AT2G28605,AT5G64860,AT4G32940,AT4G27600,AT3G06730,AT1G80480,AT1G09240,AT3G51870,AT3G60750,AT3G08690,AT4G33030,AT4G35000,AT1G04420,AT5G08610,AT3G08510,ATCG00550,AT3G18680,AT4G17460,AT1G18470,AT3G10060,AT4G16190,AT1G73700,AT2G14210,AT5G01820,AT5G04980,AT4G14210,AT4G18120,AT2G33800,AT2G11810,AT4G37510,AT2G04700,AT5G57815,ATCG01090,AT5G54840,AT5G53550,ATCG00520,AT2G24280,AT5G57610,AT5G67520,AT5G50250,AT1G49380,AT2G22680,AT3G62910,AT1G14370,AT4G13550,AT1G17280,AT1G69640,AT3G61470,AT3G14020,AT2G23430,AT3G03910,AT2G27920,AT3G06510,AT3G54720,AT4G38690,AT3G28920,AT3G62650,AT1G50320,AT1G79850,AT2G32440,AT3G59580,AT4G14890,AT3G15190,AT1G05385,AT5G25120,AT2G18790,AT1G77990,AT1G27360,AT4G23050,AT4G18050,AT4G01940,AT2G37460,AT4G27830,AT4G02075,AT1G68740,AT2G15310,AT2G03890,AT3G11020,ATCG00720,AT1G77000,AT2G15050,AT3G54890,AT2G42750,AT3G14205,AT3G19000,AT3G27820,AT3G49360,AT5G66880,AT1G15730,AT3G22420,AT4G04340,AT3G30180,AT2G45850,AT3G04210,AT1G29660,AT5G14660,AT5G13510,AT3G57530,ATCG00890,AT1G73170,AT2G21340,ATCG00590,AT5G52190,AT1G71960,AT1G67280,AT2G26910,AT3G17611,AT3G28050,AT4G35450,AT5G10180,AT1G08550,AT1G64860,AT4G09350,AT1G76520,AT1G61520,AT3G61890,AT3G45600,AT4G21280,AT5G54610,ATCG00640,AT1G49970,AT5G49660,AT1G45230,AT5G10300,AT4G11175,AT1G14280,AT2G20610,AT5G20410,ATCG00730,AT3G21250,AT4G14680,AT4G00050,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AT4G28530,AT4G12030,AT4G19420,ATCG00680,AT1G68570,AT1G68270,AT5G10380,AT1G17710,AT3G47960,AT2G41870,AT1G62560,AT1G80760,AT1G21250,AT4G05180,ATCG00350,AT1G32560,AT1G64500,AT5G50260,AT1G17840,AT3G23400,AT5G04230,AT4G26530,AT1G10960,AT1G22690,AT4G03400,AT2G43550,AT5G60910,AT4G24000,AT4G01070,AT2G29320,AT5G45650,AT5G36940,AT2G31790,AT1G51110,AT5G52320,AT1G31820,ATCG00280,AT5G58260,AT1G78780,AT5G55050,AT3G05690,AT1G23740,AT4G24120,AT2G22240,AT3G57540,AT5G45800,AT3G53960,AT3G53310,AT5G47560,AT3G51895,ATCG00270,AT4G12470,AT1G23310,AT1G28230,AT1G03680,AT5G06510,AT2G03750,AT2G43530,AT5G24120,AT3G53230,AT4G33420,AT4G21650,AT2G03550,AT1G75460,AT4G17090,AT2G17040,AT2G21730,AT1G66390,AT3G05950,AT3G03470,AT2G25450,AT1G11080,AT1G62760,AT1G56650,AT1G62750,AT5G63410,AT1G14150,AT1G16400,AT1G05300,AT3G27170,AT3G22740,AT1G02300,AT1G75820,AT1G21890,AT4G08300,AT1G56300,AT2G47880,AT5G16570,AT4G19840,AT4G37560,AT1G76080,AT1G32060,AT1G28600,AT5G10930,AT4G10120,AT4G22240,AT5G37670,AT3G26280,AT5G24160,AT2G01890,AT5G54250,AT1G73330,AT1G52000,AT5G20700,AT1G11530,AT1G73040,AT5G59780,AT2G42540,AT1G34060,AT2G45180,AT5G25450,AT3G63140,AT1G07720,AT1G51805,AT2G38170,AT4G12290,AT5G20280,AT4G10380,AT1G62360,AT3G51600,AT4G00880,AT4G33010,AT1G80170,AT1G44575,AT1G65480,AT2G26690,AT5G38710,AT2G20340,AT2G39850,AT2G35370,AT3G46130,AT1G04350,AT3G45780,AT1G44800,AT5G17860,AT4G17340,AT1G01140,AT2G29630,AT4G39800,AT5G09220,AT1G06460,AT4G37930,AT3G55800,AT5G17170,AT1G70890,AT2G39730,AT3G26290,AT4G33040,AT3G51420,AT5G36700,AT1G20160,AT3G54050,AT4G35090,AT1G07440,AT2G22980,AT4G37430,AT4G22200,AT4G04830,AT1G42970,AT1G32900,AT2G37900,AT5G49630,AT5G23660,AT4G30110,AT5G53870,AT1G56600,AT5G04140,AT1G20020,AT4G19170,AT3G53980,AT1G48750,AT3G48740,AT1G54040,AT3G62960,AT1G78020,AT2G39330,AT5G07460,AT2G41090,AT1G78370,AT1G12240,AT5G59320,AT5G14740,AT3G21670,AT4G27300,AT5G62680,AT3G01500,AT5G49730,AT5G23010,AT1G68530,AT2G13360,AT1G69870,AT1G68010,AT5G25610,AT2G24270,AT2G22990,AT2G21330,AT3G14420,AT2G33380,AT3G62550,AT5G09660,AT4G38970,AT5G59310,AT4G13770,AT3G19710 LEEA_WS-2_INOCULATION_TUMOR_UP Up- regulated expressed Arabidopsis thaliana (Ws-2) genes _Suppl-Figure 2A: Table lists all genes shown in Figure 2A differentially transcribed in the following experiments: (i) Three hours post inoculation of wounded inflorescence stalks with A. tumefaciens strain C58 (C58 3 hpi) and (ii) with strain GV3101 (GV3101 3 hpi); (iii) six days post inoculation with strain C58 (C58 6 dpi) and (iv) with GV3101 (GV3101 6 dpi), as well as (v) 35 day-old tumors induced by strain C58 (tumor 35 dpi). (DatasetsS 1 PubmedID:19794116) AT2G23170,AT2G05440,AT3G09260,AT2G38380,AT2G38390,AT4G10270,AT5G54510,AT5G39110,AT1G43800,AT4G36430,AT4G33070,AT2G16060,AT4G33560,AT2G43610,AT2G26400,AT5G56970,AT3G43190,AT5G10040,AT1G69530,AT4G21680,AT4G08770,AT3G19200,AT2G44790,AT1G66270,AT2G30770,AT1G73260,AT3G29970,AT3G13650,AT1G69880,AT2G19970,AT3G15950,AT3G54820,AT1G78850,AT5G15230,AT4G37410,AT2G47260,AT3G08030,AT1G17170,AT1G59740,AT3G26830,AT1G14890,AT2G41230,AT1G22440,AT3G13790,AT2G38530,AT2G19990,AT3G13310,AT1G31320,AT5G48070,AT3G02550,AT4G22212,AT5G38020,AT4G39675,AT2G47950,AT5G60200,AT5G39100,AT3G22120,AT3G16460,AT3G20370,AT3G09270,AT3G13610,AT4G30410,AT5G25190,AT4G38080,AT2G06850,AT4G35350,AT5G09530,AT2G29980,AT1G62770,AT3G16430,AT3G16420,AT2G02120,AT5G19100,AT5G12330,AT1G19530,AT3G43430,AT5G17980,AT1G30700,AT3G26770,AT3G54260,AT2G05790,AT3G10080,AT2G41510,AT2G13820,AT2G15120,AT2G15220,AT5G65660,AT1G11580,AT1G70710,AT5G55250,AT2G23540,AT2G02100,AT2G29490,AT2G39310,AT4G13660,AT2G17820,AT2G17850,AT2G22420,AT4G31840,AT5G17760,AT1G03220,AT5G23820,AT3G45060,AT5G15120,AT3G48450,AT4G08780,AT1G64160,AT3G21770,AT5G65360,AT5G57130,AT1G76470,AT1G76790,AT2G42570,AT3G14060,AT5G06730,AT1G18250,AT2G02130,AT3G53540,AT1G66690,AT1G66700,AT1G01620,AT2G44830,AT5G20830,AT3G15630,AT3G21420,AT5G66920,AT2G31180,AT1G61360,AT3G49620,AT4G23690,AT5G17330,AT3G02790,AT1G62300,AT3G02885,AT5G53320,AT1G28290,AT5G39890,AT2G18370,AT4G24110,AT1G59500,AT4G37390,AT4G15120,AT1G23870,AT5G59870,AT1G33055,AT4G18910,AT3G59900,AT4G24780,AT1G71380,AT1G76930,AT5G07440,AT1G28130,AT2G31390,AT1G32190,AT1G02730,AT1G09200,AT1G01010,AT4G14930,AT1G26930,AT1G09460,AT4G01870,AT2G18700,AT2G28660,AT5G54400,AT3G51670,AT5G62630,AT3G25640,AT1G19850,AT1G15040,AT1G30820,AT1G76160,AT1G04250,AT4G27450,AT2G19590,AT3G19390,AT1G76410,AT3G61820,AT3G10040,AT5G25160,AT5G09480,AT1G05260,AT2G46140,AT2G29440,AT4G11650,AT2G18140,AT2G18150,AT1G05710,AT5G28640,AT1G68470,AT5G05340,AT1G77120,AT2G25270,AT3G54560,AT5G20250,AT2G38370,AT5G22920,AT4G19810,AT4G33720,AT1G68360,AT4G12420,AT1G30720,AT5G19550,AT3G22600,AT5G19260,AT5G24760,AT1G03620,AT4G18340,AT5G53830,AT3G22620,AT3G55720,AT2G47860,AT3G15450,AT1G11670,AT4G30020,AT3G30775,AT1G03850,AT1G26770,AT2G30500,AT1G71830,AT1G01300,AT1G79420,AT3G57040,AT3G25730,AT3G62100,AT1G18100,AT4G23800,AT4G02290,AT2G35930,AT4G14465,AT5G02550,AT2G47550,AT2G34710,AT1G74030,AT3G58550,AT5G19120,AT5G26280,AT4G34160,AT4G27970,AT5G13330,AT5G47370,AT1G74010,AT3G12500,AT1G16530,AT1G63180,AT1G60730,AT1G68320,AT1G43790,AT1G36060,AT1G64405,AT4G36670,AT5G37740,AT3G54150,AT1G06180,AT5G06860,AT1G43910,AT5G60950,AT3G14680,AT1G78120,AT1G15520,AT3G53480,AT3G53190,AT1G78060,AT2G32280,AT2G29470,AT3G02640,AT1G80280,AT2G01520,AT2G26650,AT5G13080,AT5G05860,AT3G07410,AT5G51550,AT1G70850,AT5G06870,AT1G16520,AT4G37610,AT3G25900,AT2G44080,AT2G36080,AT1G71695,AT1G23460,AT1G23470,AT3G51720,AT1G41830,AT2G28950,AT5G03260,AT5G42830,AT2G25060,AT2G47270,AT1G18970,AT1G70500,AT4G34220,AT1G67830,AT3G13520,AT4G13210,AT1G74460,AT2G29550,AT2G29460,AT3G09070,AT5G23350,AT5G23380,AT5G46700,AT1G26730,AT3G60140,AT2G16660,AT1G08560,AT3G22790,AT2G28790,AT1G26380,AT4G09030,AT2G40480,AT1G21310,AT2G01430,AT3G52340,AT3G04670,AT4G15830,AT5G61890,AT2G14100,AT5G13360,AT1G10140,AT1G14290,AT1G02850,AT5G20540,AT5G54670,AT1G16920,AT1G12000,AT5G41040,AT5G22740,AT4G02520,AT2G02930,AT1G28110,AT2G39350,AT5G58860,AT3G60450,AT5G10390,AT5G53890,AT5G10510,AT4G26260,AT5G20820,AT4G20320,AT3G25130,AT4G37710,AT5G38900,AT1G66480,AT3G03660,AT1G01900,AT5G19110,AT5G05730,AT5G24090,AT4G28640,AT3G14990,AT3G18280,AT1G35780,AT3G01970,AT1G29980,AT1G59960,AT1G06550,AT1G68850,AT1G66880,AT3G02910,AT1G03090,AT4G34750,AT3G23240,AT1G35140,AT2G29480,AT5G51890,AT2G39660,AT1G63440,AT3G12830,AT3G14840,AT2G39410,AT2G48140,AT1G18980,AT2G26290,AT1G21110,AT1G07880,AT3G52870,AT3G04000,AT3G27060,AT1G02360,AT3G61850,AT3G19930,AT4G37750,AT1G02640,AT3G55840,AT3G17420,AT1G52140,AT1G29160,AT1G47670,AT3G23030,AT1G02110,AT5G05940,AT2G31360,AT5G03680,AT5G57340,AT4G30190,AT5G61440,AT5G19090,AT4G31000,AT5G24610,AT2G36910,AT3G18130,AT1G74020,AT1G14870,AT2G26710,AT1G73640,AT3G03990,AT5G24320,AT1G68620,AT2G37750,AT2G04780,AT5G13000,AT1G19050,AT1G74590,AT3G02120,AT5G44380,AT3G09410,AT1G33590,AT5G01890,AT2G35980,AT5G54970,AT5G66700,AT5G45280,AT1G60030,AT1G20850,AT2G26300,AT2G15760,AT2G31160,AT4G26870,AT3G51030,AT5G18670,AT3G19350,AT1G15210,AT1G57560,AT1G56150,AT2G22510,AT5G24580,AT3G03170,AT3G04630,AT3G24120,AT1G55020,AT4G14630,AT3G02800,AT4G36180,AT1G07370,AT4G27590,AT5G38530,AT1G62290,AT2G34650,AT4G32880,AT1G62790,AT1G79450,AT1G66580,AT5G26200,AT3G27220,AT2G47520,AT1G33790,AT2G19800,AT2G27130,AT1G32170,AT1G71697,AT3G53620,AT1G13340,AT1G54000,AT2G45290,AT5G47060,AT1G74000,AT5G15490,AT5G39610,AT5G63400,AT1G55610,AT5G63560,AT5G49460,AT1G78820,AT1G02930,AT1G02920,AT3G48510,AT1G70280,AT4G38660,AT4G26760,AT1G25530,AT2G34300,AT4G19410,AT5G43870,AT5G53900,AT5G09520,AT5G48800,AT5G22440,AT2G18550,AT5G49620,AT1G79530,AT1G16300,AT1G51420,AT5G64410,AT5G05160,AT2G37280,AT5G49280,AT4G32280,AT3G28600,AT5G23830,AT2G14890,AT3G26760,AT1G35580,AT5G62390,AT1G01480,AT4G31700,AT1G72730,AT3G06850,AT2G04090,AT1G10990,AT4G02280,AT2G41780,AT5G25930,AT5G13290,AT5G41180,AT3G54110,AT1G14040,AT2G30750,AT2G47780,AT5G26850,AT3G07540,AT3G16340,AT5G27760,AT1G25510,AT4G31820,AT2G47000,AT5G52650,AT1G50240,AT1G09780,AT1G09560,AT4G37770,AT3G61920,AT3G61380,AT5G16250,AT5G28050,AT4G22770,AT5G55180,AT4G08950,AT5G41620,AT2G46710,AT3G23150,AT2G40540,AT2G41690,AT2G24010,AT4G38470,AT5G57390,AT1G07770,AT3G23830,AT2G40940,AT1G69700,AT5G49450,AT5G49448,AT3G29810,AT1G63310,AT5G40540,AT2G26560,AT4G39230,AT5G37690,AT2G39220,AT5G10820,AT1G70470,AT4G02060,AT4G30650,AT1G19330,AT4G22730,AT5G17300,AT2G01140,AT5G61740,AT5G44480,AT5G48230,AT5G56580,AT3G56810,AT1G02220,AT1G72680,AT1G03610,AT5G46280,AT2G41810,AT4G29190,AT3G54250,AT1G11130,AT2G23320,AT5G55480,AT5G16720,AT5G43060,AT1G50490,AT2G38860,AT2G41650,AT4G37370,AT1G47480,AT4G37540,AT4G20830,AT3G56340,AT2G44130,AT3G02560,AT1G67050,AT3G57550,AT5G62890,AT2G31900,AT5G43810,AT5G03700,AT1G72140,AT5G15160,AT5G66690,AT5G33300,AT2G18690,AT3G29575,AT4G35730,AT4G10260,AT3G45610,AT4G25810,AT1G33700,AT1G06090,AT3G14600,AT3G48100,AT4G22530,AT4G24860,AT1G68060,AT5G62690,AT5G62700,AT4G24430,AT1G30440,AT5G65440,AT3G17820,AT5G36710,AT5G08000,AT2G46930,AT1G44170,AT5G56670,AT1G74790,AT3G23890,AT3G01680,AT5G15350,AT5G50130,AT3G54030,AT5G10540,AT1G64660,AT1G15930,AT5G56710,AT1G60740,AT1G65970,AT1G79690,AT2G27140,AT5G44560,AT5G19290,AT4G39900,AT5G26710,AT5G50375,AT1G22780,AT1G46264,AT5G44730,AT5G02780,AT5G62520,AT3G21240,AT5G39320,AT5G05390,AT1G69930,AT1G80110,AT5G08350,AT5G14510,AT5G18470,AT5G42720,AT3G04840,AT1G80820,AT4G39660,AT3G19910,AT5G14450,AT3G23090,AT2G40550,AT5G54130,AT5G59290,AT3G14310,AT3G43600,AT5G44340,AT2G34060,AT4G39030,AT5G48500,AT3G19820,AT1G18670,AT5G40760,AT1G72630,AT5G27920,AT3G02900,AT5G64760,AT3G07320,AT3G57030,AT2G18360,AT5G66460,AT1G76660,AT1G10540,AT5G23400,AT1G27400,AT5G66170,AT3G19790,AT5G10520,AT3G22060,AT5G16000,AT3G14610,AT1G60390,AT5G58420,AT2G16850,AT4G35100,AT5G07870,AT2G25210,AT3G06030,AT2G34140,AT4G38210,AT4G29410,AT2G43360,AT1G14730,AT2G27040,AT5G38110,AT3G60130,AT3G60260,AT4G33360,AT3G04720,AT4G36610,AT5G64340,AT5G64343,AT5G64342,AT5G64341,AT2G24100,AT1G20950,AT4G08160,AT3G60245,AT3G48930,AT4G15000,AT2G01250,AT1G50010,AT4G13195,AT5G39050,AT2G41660,AT2G36620,AT3G21510,AT5G13520,AT2G46590,AT5G44920,AT1G73370,AT5G49700,AT3G53510,AT4G01650,AT1G06840,AT5G47700,AT5G47930,AT2G38810,AT3G63440,AT1G18540,AT5G63680,AT4G37650,AT3G06350,AT2G40370,AT3G49670,AT5G64130,AT4G35380,AT1G28390,AT3G19100,AT1G79180,AT1G44110,AT1G48850,AT4G17980,AT1G25400,AT1G29310,AT1G04660,AT5G58700,AT5G58375,AT1G18840,AT5G41060,AT2G18390,AT3G25500,AT1G65690,AT3G24450,AT1G17830,AT1G23390,AT3G56370,AT1G25260,AT2G44120,AT5G24030,AT1G68400,AT1G63940,AT5G46590,AT1G54200,AT3G53890,AT3G13560,AT3G15720,AT1G09970,AT5G45750,AT1G12950,AT2G21790,AT3G07350,AT3G26980,AT3G49110,AT3G49120,AT4G23420,AT3G48580,AT1G09570,AT4G15910,AT3G25610,AT5G08570,AT2G33330,AT1G63470,AT2G18400,AT1G26910,AT4G24040,AT3G55280,AT1G71140,AT1G67000,AT1G47740,AT2G46920,AT3G55560,AT5G15080,AT5G04770,AT1G60140,AT2G32100,AT3G12490,AT3G11510,AT3G05560,AT5G67210,AT3G07480,AT2G40530,AT1G21880,AT1G68330,AT5G39660,AT3G54920,AT1G20930,AT2G35120,AT3G01790,AT5G17640,AT2G37590,AT5G13910,AT4G00440,AT4G27030,AT1G63640,AT1G68840,AT3G09200,AT1G09840,AT1G66680,AT1G72700,AT4G35920,AT3G24830,AT3G03520,AT1G30620,AT5G23740,AT3G06700,AT1G56145,AT4G22130,AT5G60670,AT5G19770,AT5G19780,AT4G16480,AT1G69420,AT5G25170,AT4G18710,AT1G30490,AT5G22500,AT3G09080,AT5G67460,AT5G48600,AT1G27620,AT2G40890,AT3G56490,AT5G01810,AT1G03905,AT3G16520,AT3G11770,AT1G53310,AT3G52090,AT5G58300,AT3G14940,AT2G28570,AT2G43590,AT1G53180,AT3G02780,AT3G52490,AT3G02230,AT5G15650 LEEA_WS-2_INOCULATION_TUMOR_DN Down- regulated expressed Arabidopsis thaliana (Ws-2) genes _Suppl-Figure 2A: Table lists all genes shown in Figure 2A differentially transcribed in the following experiments: (i) Three hours post inoculation of wounded inflorescence stalks with A. tumefaciens strain C58 (C58 3 hpi) and (ii) with strain GV3101 (GV3101 3 hpi); (iii) six days post inoculation with strain C58 (C58 6 dpi) and (iv) with GV3101 (GV3101 6 dpi), as well as (v) 35 day-old tumors induced by strain C58 (tumor 35 dpi). (DatasetsS 1 PubmedID:19794116) AT2G24240,AT1G69690,AT5G07580,AT1G07320,AT5G15850,AT2G36630,AT1G67080,AT5G19140,AT1G30640,AT3G53420,AT2G28605,AT5G64860,AT4G32940,AT2G39050,AT5G22250,AT1G27385,AT4G27600,AT3G56450,AT3G56190,AT3G06730,AT1G80480,AT1G09240,AT4G28025,AT3G51870,AT3G60750,AT3G54200,AT3G08690,AT4G33030,AT4G35000,AT4G11220,AT3G03890,AT2G37660,AT5G04810,AT1G04420,AT5G08610,AT1G78995,AT4G25620,AT3G08510,AT2G37330,AT2G35550,ATCG00550,AT3G18680,AT4G17460,AT1G18470,AT4G27390,AT3G50340,AT1G26920,AT3G10060,AT5G19855,AT4G16190,AT2G14210,AT5G01820,AT5G04980,AT4G14210,AT4G30993,AT4G18120,AT2G33800,AT5G10210,AT4G02260,AT2G11810,AT5G25280,AT4G37510,AT2G04700,AT5G57815,AT3G09650,ATCG01090,AT5G54840,AT5G53550,ATCG00520,AT2G24280,AT5G57610,AT5G62720,AT5G67520,AT5G50250,AT1G49380,AT2G22680,AT3G62910,AT1G14370,AT4G18580,AT1G67840,AT4G13550,AT3G10970,AT5G50430,AT1G17280,AT1G69640,AT5G28450,AT3G61470,AT3G14020,AT2G27920,AT3G06510,AT3G54720,AT2G01590,AT2G26340,AT1G14345,AT3G28920,AT3G62650,AT4G34830,AT1G50320,AT1G67810,AT2G05520,AT4G32240,AT1G79850,AT2G32440,AT5G11070,AT4G14890,AT1G25520,AT3G44450,AT3G15190,AT1G05385,AT2G18790,AT1G62250,AT4G23050,AT2G07000,AT4G13670,AT4G18050,AT4G01940,AT2G37460,AT4G27830,AT4G02075,AT1G68740,AT2G15310,AT2G03890,AT3G11020,AT2G01110,AT3G48185,ATCG00720,AT1G77000,AT3G54890,AT2G42750,AT3G14205,AT1G73060,AT5G16380,AT3G19000,AT4G38550,AT3G27820,AT3G49360,AT5G66880,AT1G15730,AT3G22420,AT4G04340,AT3G30180,AT2G30170,AT2G45850,AT3G04210,AT5G14660,AT1G02205,AT5G13510,AT1G16720,AT3G57530,AT3G04260,AT2G41120,AT4G35250,AT4G17840,ATCG00500,AT5G42310,AT4G00700,AT2G01620,ATCG00890,AT5G19900,AT1G52220,AT2G07718,ATMG00590,AT1G65260,AT1G73170,AT2G21340,ATCG00590,AT5G52190,AT1G71960,AT5G41810,AT1G67280,AT2G26910,AT5G64230,AT3G17611,AT3G28050,AT4G35450,AT5G10180,AT1G08550,AT1G64860,AT3G18500,AT2G21385,AT5G14970,AT4G01050,AT1G76520,AT1G61520,AT3G61890,AT3G45600,AT4G21280,ATCG00640,AT1G49970,AT5G49660,AT2G41720,AT1G32160,AT1G45230,AT5G10300,AT4G11175,AT1G52510,AT2G20610,AT5G20410,ATCG00730,AT3G21250,AT4G14680,AT4G00050,AT2G30570,AT3G08010,AT1G56170,AT1G06680,AT2G43010,AT5G53940,AT3G49220,AT2G01320,AT5G45430,AT5G45428,AT3G57020,AT1G63010,AT4G35290,AT5G64240,AT1G76360,AT4G23880,AT1G53670,AT2G35410,AT3G01850,AT3G06170,AT4G36250,AT4G02630,AT1G21065,AT5G58570,AT1G30500,ATCG00340,AT1G50900,AT1G71500,AT5G05200,AT5G08400,AT5G66570,AT3G60690,AT5G18760,AT5G13170,AT2G45590,AT4G32020,AT4G01310,AT3G55940,AT2G39820,AT3G18370,AT3G27160,AT2G06520,AT5G64840,AT3G05220,AT1G56500,AT1G02560,AT1G54290,AT2G20890,AT4G38020,AT5G47640,AT1G19740,ATCG00580,AT2G20260,AT2G29130,AT4G36930,AT3G18560,AT5G35490,AT1G09130,AT5G40500,AT3G06130,AT5G04080,AT4G15560,AT2G35490,AT3G04790,AT1G22910,AT5G27150,AT5G06290,ATCG01040,AT1G60160,AT4G14070,AT5G16710,AT5G11610,AT3G16570,AT2G26080,AT4G32190,AT4G23010,AT1G78070,AT1G01500,AT1G22750,AT2G43560,AT1G07650,AT2G40300,AT1G72430,AT2G39420,AT2G01870,AT1G63830,AT3G19170,AT1G52590,AT4G34290,AT2G47710,AT3G04530,AT1G08900,AT1G08890,AT3G14067,AT5G53710,AT2G33480,AT2G32860,AT4G19370,AT5G26570,AT5G49900,AT4G23180,ATCG00560,AT5G38660,AT5G43780,AT1G78510,AT4G38225,AT2G04790,AT5G01750,AT2G31570,AT3G55760,AT3G21270,AT5G37360,AT1G51340,AT1G21350,AT5G64640,AT1G72510,AT3G43720,AT1G52720,AT4G26130,AT4G17560,ATCG01100,AT1G76730,AT5G28750,AT3G62260,AT3G45310,AT3G61430,AT2G22330,AT5G13800,AT5G65840,AT3G21690,AT2G37240,AT1G69935,AT1G22140,AT4G04955,ATCG00570,AT2G45720,AT1G77930,AT2G30390,AT4G22790,AT2G04795,AT3G60520,AT1G15820,AT1G26800,AT5G47190,AT4G02530,AT1G18060,AT4G32590,AT1G04580,AT1G02590,AT1G28570,AT5G47720,AT3G61260,AT2G27680,AT1G66670,AT3G11660,AT4G27710,AT2G46440,AT2G46430,AT5G60360,AT1G22070,AT2G01290,AT3G60910,AT1G29700,AT1G55490,ATCG00120,AT4G25650,AT3G24190,AT3G01060,AT4G34240,AT4G17880,AT3G61900,AT2G43060,AT2G37710,AT2G18950,AT5G62130,AT2G25140,AT1G62660,AT5G14940,AT1G74730,AT5G66490,AT2G43520,AT3G53920,AT1G07700,AT5G14320,AT1G72300,AT3G26570,ATCG00510,AT4G29060,AT4G23260,AT4G37470,AT4G30270,AT4G09020,AT2G27220,AT1G54160,AT1G63970,AT5G18240,AT2G02070,AT1G76800,AT1G50020,AT3G25480,AT5G02490,AT3G50770,AT3G08940,AT2G38010,AT4G17600,AT5G05110,AT5G23120,AT3G57190,AT1G51110,AT4G03060,AT5G45350,AT5G27930,AT4G08150,AT2G04240,AT2G21280,AT2G43910,AT5G43260,AT1G20490,AT5G13770,AT4G33470,AT1G26230,AT3G50685,AT5G50920,AT2G27290,AT3G15780,AT1G73750,AT1G51500,AT3G55250,AT5G45680,AT5G48300,AT4G00370,AT2G01570,AT1G30380,AT1G78815,AT1G76100,AT4G11330,AT1G79600,AT1G54500,AT1G07180,AT3G21260,AT1G10340,AT4G19960,AT2G38210,AT2G38230,AT5G02940,AT1G18000,AT2G20960,AT5G52970,AT1G54730,AT5G14910,AT5G30510,AT1G32990,AT2G21880,AT4G27700,AT5G44530,AT3G56620,AT4G28030,AT1G77090,AT5G19940,AT3G21710,AT5G27350,AT3G26085,AT1G10360,AT3G11670,AT5G64570,AT1G32070,AT5G27560,AT5G13720,AT5G35970,AT5G58330,ATCG00490,AT1G49975,AT4G26370,AT1G11430,AT4G16490,AT4G00895,AT1G24100,AT5G58650,AT1G12940,AT2G32480,AT1G25230,AT3G57260,ATCG01050,AT2G20570,AT4G23990,AT5G41740,AT4G11570,AT5G55930,AT3G01210,AT1G21050,AT5G67030,AT3G01660,AT5G41790,AT1G21680,AT4G34920,AT1G76570,AT1G68590,AT2G36870,AT1G22770,AT4G01440,AT1G43650,AT1G78670,AT4G36530,AT3G21790,AT5G57350,AT5G14880,AT5G54600,AT2G36390,ATCG00150,AT1G09070,AT3G18610,AT4G12830,AT5G59750,AT3G02040,AT3G55330,AT1G10970,AT3G07700,AT4G28660,AT3G57520,ATCG00210,AT4G38740,AT5G53580,AT5G08410,AT4G38060,AT5G21100,AT1G70810,AT2G23670,AT5G43330,AT4G25130,AT3G57680,AT1G13090,AT1G34000,AT5G24150,AT5G17230,AT2G17840,AT3G56010,AT2G03980,AT5G50400,AT2G17710,AT5G59030,AT1G78680,AT5G62000,AT1G10760,AT2G37220,AT1G06430,AT3G50280,AT5G13200,AT2G29360,ATCG00430,AT4G27990,AT5G02480,AT4G29070,AT1G11350,AT5G61410,AT2G47730,AT1G23950,AT5G15410,AT5G57040,AT4G18810,AT1G67090,AT5G38430,AT5G38420,AT5G38410,AT4G20360,AT1G07010,AT1G75350,AT4G20070,AT1G79520,AT5G07330,AT5G07020,AT1G22500,AT5G51720,AT1G02475,AT4G23570,AT3G04550,AT1G35350,AT5G38510,AT4G01150,AT2G46450,AT1G79510,AT4G21860,AT3G56730,AT4G12800,AT1G45474,AT1G76130,AT3G63490,AT5G33290,AT3G14280,AT3G27110,ATCG00330,AT3G01440,AT4G16410,AT5G28300,AT5G38990,AT3G05160,AT3G05165,AT2G05540,AT3G46970,ATCG00130,AT1G61740,AT4G31240,AT4G27800,AT3G12780,AT4G26850,AT3G56200,AT4G00730,AT4G38840,AT4G09760,AT2G40100,AT5G51110,AT1G55480,AT1G69840,AT2G12400,AT4G34190,AT4G30530,AT1G08380,AT1G03130,AT4G09650,AT2G26500,AT2G27500,AT5G13650,AT3G51510,AT4G05590,AT5G25890,AT3G63520,AT2G35940,AT2G05310,AT2G31110,AT2G35290,AT4G04770,AT5G23750,AT2G31800,AT3G11090,AT5G23920,AT4G33000,AT2G47910,AT1G76825,AT1G76820,AT1G61660,AT3G13062,AT3G44880,AT2G21640,AT1G76450,ATCG01070,AT5G05280,AT5G05282,AT1G12900,AT3G23340,AT5G10695,AT2G28720,AT4G34980,AT3G54140,AT1G74660,AT3G61080,AT2G30950,AT5G28080,AT1G28140,AT1G63190,AT1G66970,AT3G21760,AT3G02020,AT5G14060,AT5G35170,AT3G27020,AT2G37540,AT1G31170,AT2G02080,AT3G03190,AT3G55630,AT5G57710,AT3G05650,AT3G27925,AT2G04030,AT4G17550,AT3G55130,AT4G00360,AT1G62780,AT4G29670,AT1G30530,AT4G13010,AT4G27820,AT1G27480,AT3G26740,AT5G63800,AT1G05190,AT5G05600,AT5G60850,AT5G40450,AT1G80310,AT4G28080,AT4G30470,AT5G37500,AT3G52150,AT4G15545,AT4G03280,AT2G03310,AT5G50160,AT2G40460,AT3G12750,AT3G56080,AT5G57345,AT1G52800,AT1G79040,AT2G46420,AT5G65280,ATCG00710,AT5G57180,AT2G44920,AT2G46820,AT3G17790,AT2G24820,AT2G38790,ATCG00420,AT3G15353,ATCG00600,AT4G11320,AT4G11310,AT2G26250,AT3G63210,AT5G04950,AT4G23890,AT1G71030,AT3G61880,ATCG00440,AT3G61870,AT5G09440,AT4G04640,AT1G35750,AT1G60190,AT4G28750,AT1G61180,AT1G17870,ATCG00300,AT2G34810,AT1G49230,AT2G47890,AT1G19715,AT5G52420,AT2G46650,AT1G20440,AT4G39970,AT2G21960,AT5G43850,ATCG01060,AT1G69730,AT2G38640,AT3G53720,AT2G31040,AT4G32260,AT3G22370,AT5G61420,AT1G54780,AT3G47430,AT1G59700,AT2G33050,AT2G33060,AT2G40880,AT1G68660,AT2G14750,AT2G05620,AT1G32520,AT5G59080,AT2G46600,AT3G26580,AT1G20340,AT2G26900,AT5G25110,ATCG01080,AT1G65230,AT1G30760,AT2G40900,AT1G60960,AT2G32870,AT5G15450,AT5G28020,AT3G26510,AT3G19800,AT1G22160,AT2G29650,AT1G52880,AT3G63110,AT4G16000,AT2G34860,AT4G28740,ATCG00140,AT5G65040,AT2G42690,AT3G26300,AT1G64710,AT3G56290,AT5G66190,AT1G70700,AT3G48200,AT2G42600,AT4G37760,AT1G05010,AT3G46780,AT1G49310,AT1G13930,AT2G21970,AT5G66400,AT1G74090,AT2G42530,AT1G18880,AT3G47650,AT3G03870,AT4G26700,AT2G15580,AT1G53560,AT2G27360,AT4G39940,AT5G02790,AT1G71480,AT2G23840,AT5G44190,AT4G25700,AT5G23810,AT1G64970,AT2G22970,AT5G61520,AT1G50250,AT3G27210,AT1G19150,AT5G35630,AT5G43440,ATCG00020,AT3G45140,AT4G25000,AT1G01070,AT1G28610,AT1G16880,AT2G43660,AT5G54940,AT5G37600,AT5G61820,AT1G79270,AT1G07500,ATCG00690,AT1G74880,AT1G78970,AT4G04460,AT5G42270,AT2G38090,AT5G01220,AT2G42760,AT3G19030,AT5G64040,AT1G01320,AT3G50820,AT5G43180,AT1G23090,AT1G29050,AT5G45890,AT5G58310,AT4G31330,AT5G58140,AT1G09140,AT5G57800,AT1G64770,AT2G03710,AT2G29350,AT1G21460,AT4G18210,AT4G18220,AT2G44745,AT5G43750,AT1G18710,AT5G60600,AT2G47600,AT3G61210,AT5G45380,AT3G23920,AT3G15360,AT5G19875,AT2G39470,AT3G26170,AT3G26180,AT4G31500,AT5G06530,AT1G52400,AT1G18590,AT5G02120,AT3G59060,AT3G22890,AT2G44210,AT4G23493,AT1G72030,AT5G63710,AT2G28900,AT2G29120,AT4G31870,AT2G24762,AT1G23040,AT4G10310,AT3G63160,AT2G28400,AT4G24450,AT1G55110,AT1G03630,AT1G32640,AT4G20260,AT3G02730,AT1G73630,AT4G37200,AT2G39920,AT3G23410,AT4G15490,AT3G48420,AT4G28530,AT4G12030,AT4G19420,AT2G36145,ATCG00680,AT1G68570,AT4G33660,AT1G68270,AT5G10380,AT4G04330,AT1G17710,AT3G47960,AT2G41870,AT1G62560,AT1G80760,AT5G61660,AT1G21250,AT4G05180,ATCG00350,AT3G17930,AT1G32560,AT1G64500,AT5G50260,AT4G02920,AT1G17840,AT3G23400,AT3G22210,AT5G04230,AT4G26530,AT1G10960,AT1G22690,AT4G03400,AT2G43550,AT1G67360,AT5G60910,AT4G24000,AT4G11960,AT4G01070,AT2G29320,AT5G45650,AT2G04039,AT5G36940,AT2G25510,AT5G23240,AT2G31790,AT1G12250,AT3G43930,AT5G52320,AT1G31820,ATCG00280,AT5G58260,AT1G78780,AT5G55050,AT3G05690,AT1G23740,AT4G10300,AT4G24120,AT1G29395,AT1G18730,AT2G22240,AT3G57540,AT2G29670,AT4G21210,AT5G45800,AT3G53960,AT3G53310,AT5G47560,AT3G51895,ATCG00270,AT4G12470,AT1G23310,AT1G64680,AT1G28230,AT1G03680,AT5G06510,AT2G03750,AT1G52410,AT2G43530,AT5G18130,AT5G24120,AT1G07280,AT3G53230,AT1G72930,AT1G72910,AT4G33420,AT4G21650,AT2G03550,AT4G22890,AT1G73680,AT1G75460,AT1G15980,AT4G17090,AT2G45740,AT5G65870,AT2G17040,AT2G21730,AT1G66390,AT3G05950,AT3G03470,AT2G25450,AT1G11080,AT5G53420,AT1G62760,AT1G56650,AT1G62750,AT5G63410,AT5G67370,AT1G14150,AT1G16410,AT1G16400,AT1G05300,AT3G27170,AT1G70760,AT3G22740,AT1G02300,AT1G75820,AT1G21890,AT5G55620,AT4G08300,AT1G56300,AT2G47880,AT5G16570,AT4G19840,AT1G42550,AT1G52810,AT3G14560,AT4G37560,AT1G17100,AT1G76080,AT1G32060,AT5G44580,AT1G28600,AT4G32340,AT5G10930,AT1G52870,AT4G10120,AT4G04020,AT4G22240,AT3G50440,AT5G37670,AT3G26280,AT5G24160,AT2G01890,AT3G19550,AT1G11700,AT3G25690,AT5G54250,AT1G73330,AT1G52000,AT5G20700,AT1G11530,AT1G73040,AT5G59780,AT3G58990,AT2G42540,AT1G30260,AT5G52780,AT1G34040,AT5G25980,AT5G26000,AT2G45180,AT2G43100,AT5G25450,AT3G63140,AT1G07720,AT1G51805,AT1G24575,AT2G38170,AT1G32080,AT2G35820,AT4G12290,AT5G54770,AT5G20280,AT4G10380,AT1G62360,AT3G51600,AT4G00880,AT4G33010,AT1G80170,AT4G01390,AT3G26960,AT1G44575,AT1G65480,AT2G26690,AT5G38710,AT2G20340,AT2G39850,AT1G68600,AT2G35370,AT3G46130,AT1G04350,AT3G45780,AT1G44800,AT5G17860,AT4G17340,AT4G30460,AT1G01140,AT2G29630,AT4G39800,AT3G25770,AT3G25760,AT5G09220,AT1G06460,AT4G37930,AT5G58770,AT3G55800,AT2G19310,AT5G38980,AT5G17170,AT1G70890,AT4G30450,AT2G39730,AT3G26290,AT4G33040,AT3G51420,AT5G36700,AT1G20160,AT3G54050,AT4G35090,AT1G07440,AT1G78450,AT1G19670,AT2G22980,AT4G37430,AT4G22200,AT4G04830,AT1G09340,AT1G42970,AT1G32900,AT2G37900,AT5G49630,AT5G23660,AT4G30110,AT5G53870,AT3G47070,AT1G56600,AT4G09890,AT1G64780,AT5G04140,AT1G67860,AT1G20020,AT4G19170,AT3G53980,AT1G48750,AT1G65490,AT3G48740,AT1G54040,AT3G62960,AT1G78020,AT2G39330,AT5G07460,AT2G41090,AT1G78370,AT1G12240,AT3G62410,AT5G59320,AT5G14740,AT3G21670,AT1G64360,AT4G27300,AT3G28270,AT5G62680,AT3G01500,AT4G15440,AT5G49730,AT5G49740,AT5G23010,AT1G80130,AT1G68530,AT2G13360,AT1G69870,AT1G68010,AT4G00780,AT5G25610,AT2G24270,AT1G64370,AT2G22990,AT2G21330,AT3G14415,AT3G14420,AT2G33380,AT3G62550,AT5G09660,AT4G38970,AT3G15840,AT1G09310,AT1G67865,AT1G67870,AT5G59310,AT4G13770,AT3G19710 LEEA_WS-2_STRAIN-AT-6DPI_UP Up- regulated expressed Arabidopsis thaliana (Ws-2) genes _Supplemental Figure 2B which are affected by both strains at 3 hpi (DatasetsS 1 PubmedID:19794116) AT1G17860,AT4G13180,AT4G23810,AT4G22530,AT2G44370 LEEA_WS-2_BOTH-STRAIN-AT-3HPI_UP Up- regulated expressed Arabidopsis thaliana (Ws-2) genes _Supplemental Figure 2B which are affected by both strains at 6 dpi (DatasetsS 1 PubmedID:19794116) AT1G43800,AT5G17330,AT5G60950,AT5G15230,AT3G16430,AT1G66690,AT2G43570,AT2G43620,AT2G43610,AT2G19970,AT3G04720,AT2G16060,AT4G02520,AT2G02930,AT1G02930,AT1G02920,AT2G30770,AT4G39950,AT4G31970,AT3G26830,AT4G08770,AT4G08780,AT5G64120,AT1G78850,AT3G16420,AT4G12480,AT4G12500,AT3G13610,AT1G66700,AT3G29970,AT2G26400,AT3G20370,AT3G09260,AT4G33560,AT3G24503 LEEA_WS-2_BOTH-STRAIN-AT-6HPI_DN Down- regulated expressed Arabidopsis thaliana (Ws-2) genes _Supplemental Figure 2B which are affected by both strains at 6 dpi (DatasetsS 1 PubmedID:19794116) AT3G45060 LEEA_WS-2_C58-GV3101-AT-3HPI_UP Up- regulated expressed Arabidopsis thaliana (Ws-2) genes _Supplemental Figure 4 that are affected either by C58 or GV3101 at 3 hpi (DatasetsS 1 PubmedID:19794116) AT2G23170,AT1G30700,AT2G43620,AT5G49480,AT1G52200,AT4G15550,AT2G39200,AT1G55920,AT4G01870,AT1G17170,AT4G11280,AT5G64120,AT1G76600,AT4G27260,AT1G80840,AT5G02760,AT2G47550,AT1G15580,AT5G63790,AT5G39580,AT1G19020,AT4G02380,AT4G37770,AT1G51800,AT4G37370,AT2G30040 LEEA_WS-2_C58-GV3101-AT-3HPI_DN Down- regulated expressed Arabidopsis thaliana (Ws-2) genes _Supplemental Figure 4 that are affected either by C58 or GV3101 at 3 hpi (DatasetsS 1 PubmedID:19794116) AT1G68290,AT5G11160,AT4G39950,AT2G02990 LEEA_WS-2_C58-GV3101-AT-6HPI_UP Up- regulated expressed Arabidopsis thaliana (Ws-2) genes _Supplemental Figure 4 that are affected either by C58 or GV3101 at 6hpi (DatasetsS 1 PubmedID:19794116) AT2G23170,AT3G59900,AT5G47550,AT1G62500,AT2G41230,AT1G59740,AT1G10640,AT1G12090,AT3G12500,AT2G19990,AT1G74670,AT2G26020,AT5G48485,AT1G12080,AT1G19530,AT5G44420,AT3G22120,AT3G14370,AT2G44080,AT5G22460,AT1G75040,AT5G25350,AT5G10040,AT2G19590,AT1G30515,AT2G39010,AT5G55450,AT5G12330,AT1G26770,AT1G15580,AT1G60590,AT4G12470,AT5G19260,AT5G55250,AT1G09750,AT4G37770,AT2G30040,AT4G37800,AT4G14930,AT4G25630,AT5G65640,AT2G44040,AT1G71380,AT2G43590,AT3G55720,AT5G25460,AT4G02380,AT5G20820,AT5G18470,AT3G23150,AT4G17980,AT5G25190,AT2G47260,AT2G37130,AT5G40730,AT2G40205,AT5G13140,AT4G33070,AT1G10585,AT5G06860,AT5G54970,AT1G04250,AT5G59870,AT2G17500,AT1G69530,AT5G01210,AT3G23990,AT4G16260,AT4G13180,AT2G38540,AT5G54510,AT1G53070,AT4G02290,AT2G41820,AT4G10270,AT4G30410,AT1G54690,AT3G54640 LEEA_WS-2_C58-GV3101-AT-6HPI_DN Down- regulated expressed Arabidopsis thaliana (Ws-2) genes _Supplemental Figure 4 that are affected either by C58 or GV3101 at 6 hpi (DatasetsS 1 PubmedID:19794116) AT4G13770,AT1G68570,AT3G15450,AT4G09760,AT5G57660,AT2G24550,AT5G09480,AT3G50400,AT2G40000,AT5G63560,AT2G13360,AT3G11430,AT3G52840,AT1G07610,AT1G61820,AT4G12030,AT5G61600,AT1G74840,AT3G58990,AT5G09440,AT3G61060,AT2G47180,AT3G15630,AT5G49360,AT2G28200,AT2G32150,AT5G49450,AT5G49448,AT3G47950,AT2G15890,AT1G55020,AT3G45970,AT1G13700,AT4G24140,AT5G50450,AT2G22510,AT2G19800,AT1G80920,AT1G76590,AT2G23540,AT4G36610,AT5G18130,AT3G62550,AT3G53510,AT2G30210,AT2G48130,AT1G68850,AT3G62730,AT3G59940,AT2G16660,AT2G02710,AT5G22500,AT3G22600,AT1G74460,AT5G09520,AT2G47200,AT3G03530,AT4G36040,AT3G30775,AT3G19710,AT5G13580,AT5G64260,AT5G23010,AT3G22620,AT5G20250,AT5G37690,AT1G70700,AT4G38080,AT2G42530,AT1G70290,AT2G18370,AT2G48140,AT3G58550,AT2G21100,AT1G54540,AT1G61810,AT5G61590,AT5G57560,AT5G41040,AT5G09530,AT5G58860,AT1G80440 LEEA_WS-2_3HPI-ELF26_UP Up- regulated expressed Arabidopsis thaliana (Ws-2) genes _Comparison 3 hpi with elf26: This Table lists the genes differentially expressed at (i) 3hpi C58, (ii) 3hpi GV3101, and those after a treatment with the elf26 peptide according to Zipfel et al. (2006). (DatasetsS 1 PubmedID:19794116) AT2G23170,AT1G30700,AT4G13180,AT2G43620,AT5G49480,AT1G52200,AT4G15550,AT2G39200,AT4G23810,AT1G55920,AT4G01870,AT1G17170,AT4G11280,AT5G64120,AT1G76600,AT4G27260,AT2G44370,AT1G80840,AT5G02760,AT2G47550,AT1G15580,AT5G63790,AT5G39580,AT1G17860,AT1G19020,AT4G22530,AT4G02380,AT4G37770,AT1G51800,AT4G37370,AT2G30040 LEEA_WS-2_3HPI-ELF26_DN Down- regulated expressed Arabidopsis thaliana (Ws-2) genes _Comparison 3 hpi with elf26: This Table lists the genes differentially expressed at (i) 3hpi C58, (ii) 3hpi GV3101, and those after a treatment with the elf26 peptide according to Zipfel et al. (2006). (DatasetsS 1 PubmedID:19794116) AT1G68290,AT5G11160,AT4G39950,AT2G02990,AT2G31900 EFETOVA_ABA_DROUGHT_DN Down-regulated-ABA- and drought responsive genes (Table S1 PubmedID:17827272) AT2G33380,AT2G42540,AT1G73330,AT1G29395,AT1G32560,AT2G42530,AT5G66400,AT1G20440,AT1G01470,AT2G17840,AT4G34240,AT1G20450,AT5G37770 EFETOVA_ABA_DROUGHT_UP Up-regulated-ABA- and drought responsive genes (Table S1 PubmedID:17827272) AT4G15910,AT5G08350,AT1G69700,AT5G23350,AT2G46140,AT2G16850,AT3G16240,AT4G18910,AT2G01620,AT3G54820,AT3G26090 MUSTROPH_GO_HYPOXIC-STRESS_CELL-TYPE-UP GO_more_induced-Differential gene expression analysis of hypoxic stress AND cell types (DatasetsS7 PubmedID:19843695) AT1G09520,AT1G11130,AT1G12000,AT1G13600,AT1G14550,AT1G14610,AT1G14830,AT1G22480,AT1G24360,AT1G32210,AT1G52890,AT1G61100,AT1G62640,AT1G63250,AT1G76550,AT1G78920,AT2G02000,AT2G02130,AT2G17850,AT2G25780,AT2G32440,AT2G43550,AT3G02530,AT3G02880,AT3G15000,AT3G15353,AT3G23990,AT3G42050,AT3G52310,AT3G56100,AT4G16450,AT4G19960,AT4G19980,AT4G23810,AT4G29080,AT4G31760,AT4G36920,AT4G37295,AT5G01500,AT5G05170,AT5G08610,AT5G23630,AT5G49030,AT5G49555,AT5G52670,AT5G55590,AT5G58270,AT5G61670,AT5G62200,AT4G26300,AT2G42520,AT3G50130,AT3G15095,AT4G29840,AT4G38550,AT4G21820,AT4G24830,AT4G01020,AT5G05460,AT5G50390,AT5G64290,AT5G46290,AT3G11945,AT1G63770,AT3G25860,AT3G16950,AT1G77760,AT1G79690,AT5G13930,AT1G70770,AT4G37640,AT1G34130,AT1G11680,AT1G21750,AT4G27500,AT4G11420,AT5G13990,AT4G37910,AT2G30970,AT5G08300,AT5G37510,AT2G26080,AT2G33210,AT3G55410,AT3G58610,AT4G26970,AT4G35850,AT5G23300,AT5G55070,AT2G26140,AT2G46470,AT1G13210,AT3G57490,AT4G39080,AT1G62020,AT1G30120,AT4G00360,AT1G01600,AT4G33680,AT5G58550,AT1G50140,AT4G21710,AT1G68990,AT5G66280,AT1G17500,AT5G39320,AT3G03250,AT5G35360,AT3G51970,AT1G70710,AT3G28180,AT2G38700,AT3G05190,AT1G78950,AT5G26710,AT2G30800,AT3G60330,AT5G37830,AT3G21340,AT3G44200,AT1G61370,AT4G37950,AT3G61580,AT2G30210,AT2G40370,AT4G26770,AT1G53310,AT3G02360,AT4G20140,AT2G36580,AT5G08570,AT5G56350,AT2G17510,AT5G66960,AT4G16600,AT1G66150,AT1G10560,AT2G17370,AT5G20280,AT1G02530,AT3G53510,AT1G78280,AT4G13750,AT4G17550,AT2G24610,AT2G25990,AT4G00570,AT4G00740,AT5G51070,AT1G14670,AT1G65280,AT1G72170,AT3G50310,AT3G58510,AT4G00630,AT5G39040,AT3G02550,AT5G08040,AT1G69020,AT3G13920,AT4G30010,AT3G24495,AT4G19040,AT4G39730,AT1G14910,AT1G32740,AT1G75350 MUSTROPH_TF_HYPOXIC-STRESS_CELL-TYPE-UP TF_more_induced-Differential gene expression analysis of hypoxic stress AND cell types (DatasetsS7 PubmedID:19843695) AT1G13600,AT1G18860,AT1G20980,AT1G24625,AT1G34190,AT1G52890,AT2G04240,AT2G25990,AT3G02550,AT3G12720,AT3G18930,AT3G20770,AT4G21340,AT4G23810,AT4G36920,AT5G57390 MUSTROPH_GO-LESS_HYPOXIC-STRESS_CELL-TYPE-UP GO_less_induced-Differential gene expression analysis of hypoxic stress AND cell types (DatasetsS7 PubmedID:19843695) AT1G12910,AT1G18070,AT1G18450,AT1G19850,AT1G23205,AT1G29260,AT1G33050,AT1G52300,AT1G52830,AT1G62400,AT1G70310,AT1G72340,AT1G75250,AT2G02770,AT2G18400,AT2G19590,AT2G21590,AT2G22425,AT2G29570,AT2G38300,AT2G41630,AT2G43550,AT3G12890,AT3G15000,AT3G20000,AT3G24495,AT3G25120,AT3G25920,AT3G43190,AT3G46900,AT3G48460,AT4G12430,AT4G20050,AT4G26770,AT4G32280,AT5G08610,AT5G13710,AT5G17050,AT5G20280,AT5G20830,AT5G43970,AT5G49555,AT5G51470,AT5G62520,AT5G63890,AT3G60245,AT5G03850,AT5G46160,AT5G64140,AT3G10090,AT1G65700,AT3G11500,AT5G48870,AT1G19510,AT1G23160,AT1G75350,AT2G22830,AT2G42210,AT3G61210,AT4G31985,AT5G04750,AT5G50810,AT5G57540,AT1G29490,AT1G49400,AT1G73720,AT2G02130,AT3G10610,AT4G28850,AT2G37030,AT2G47670,AT4G33865,AT1G14890,AT2G01090,AT2G28085,AT2G33340,AT4G27450,AT2G03870 MUSTROPH_TF-LESS_HYPOXIC-STRESS_CELL-TYPE-UP TF_less_induced-Differential gene expression analysis of hypoxic stress AND cell types (DatasetsS7 PubmedID:19843695) AT1G17460,AT1G19850,AT1G68840,AT1G69580,AT2G04240,AT2G30410,AT3G49690,AT3G57670,AT4G00220,AT4G32040,AT4G36540,AT4G36710,AT5G04760,AT5G60440,AT4G09460,AT5G05090,AT5G62610 JAMET_CWGS_5-11-DAY-HYPOCOTYL_UP Up- regulated Cell Wall Genes (CWGs) with detecTable levels of transcripts in 5- and 11-day-old hypocotyls (File 1 PubmedID:19878582) AT5G40960,AT5G20230,AT3G13520,AT5G53250,AT3G61640,AT4G09030,AT2G41480,AT4G24780,AT5G11740,AT4G28250,AT5G40970,AT1G47960,AT2G38390,AT3G01950,AT2G37040,AT2G47930,AT3G01940,AT3G15720,AT1G69530,AT1G56600,AT4G25260,AT1G23205,AT4G27520,AT1G55850,AT1G72230,AT1G12780,AT3G29090,AT5G64640,AT3G15370,AT4G12880,AT1G08500,AT4G37530,AT2G18150,AT3G07330,AT5G06730,AT5G15350,AT1G68850,AT1G69460,AT5G58090,AT1G62440,AT2G35380,AT4G31840,AT5G49720,AT3G27400,AT1G14890,AT4G38270,AT3G17220,AT3G55790,AT2G01610,AT3G07680,AT1G57620,AT4G30270,AT3G14960,AT5G64310,AT4G26220,AT4G36430,AT3G27200,AT1G60590,AT5G05290,AT5G66390,AT2G27035,AT5G62350,AT3G11420,AT1G21900,AT2G27500,AT2G22420,AT1G26770,AT5G53810,AT5G25090,AT5G48070,AT1G62760,AT3G06260,AT1G14010,AT4G24260,AT3G29810,AT3G47380,AT3G49330,AT4G24430,AT1G72680,AT1G70720,AT4G26940,AT4G39000,AT1G35230,AT4G19750,AT4G17030,AT5G53870,AT1G70630,AT2G37640,AT5G44930,AT2G14890,AT5G18690,AT1G18690,AT2G15880,AT5G51480,AT3G60280,AT2G43080,AT5G10430,AT5G24105,AT2G40370,AT3G55140,AT4G33970,AT4G19010,AT3G20570,AT4G28360,AT1G73250,AT4G23920,AT2G28950,AT3G24480,AT3G10340,AT5G64110,AT1G33250,AT4G20850,AT5G64620,AT3G62820,AT1G23480,AT5G16190,AT2G24450,AT3G22800,AT5G05390,AT5G57920,AT5G18900,AT1G20270,AT5G53340,AT4G16260,AT3G05610,AT1G51680,AT5G07475,AT4G25600,AT1G77810,AT1G27120,AT5G05340,AT5G26330,AT2G27860,AT3G51160,AT3G58790,AT5G20560,AT1G53840,AT4G37520,AT4G13990,AT5G20330,AT1G32860,AT1G72990,AT4G38210,AT5G50660,AT2G25060,AT4G21326,AT3G62720,AT2G14620,AT2G30210,AT4G00230 JAMET_CWGS_5-11-DAY-HYPOCOTYL_DN Down- regulated Cell Wall Genes (CWGs) with detecTable levels of transcripts in 5- and 11-day-old hypocotyls (File 1 PubmedID:19878582) AT2G34850,AT5G49215,AT2G03090,AT1G68725,AT3G16860,AT1G49490,AT3G61990,AT5G20740,AT1G53290,AT4G16745,AT1G71380,AT3G62110,AT1G70500,AT5G19880,AT2G25300,AT2G33100,AT4G19730,AT1G19170,AT5G14650,AT3G45960,AT1G03870,AT2G32300,AT1G02000,AT5G62620,AT4G25820,AT2G19440,AT1G30080,AT3G55500,AT1G80820,AT2G02850,AT2G45310,AT5G48930,AT4G12390,AT5G11610,AT1G68470,AT1G32170,AT1G66250,AT4G18340,AT3G13750,AT5G04310,AT1G09910,AT3G11700,AT5G47780,AT5G19670,AT5G25820,AT4G07960,AT1G67410,AT1G75110,AT2G01850,AT2G26600,AT1G64760,AT3G12880,AT3G47670,AT3G06440,AT1G32930,AT1G14070,AT2G40610,AT1G28290,AT3G02210,AT4G34230,AT5G04330,AT5G01190,AT1G08200,AT3G28340,AT1G74680,AT5G24090,AT1G30620,AT3G01040,AT2G38650,AT1G21480,AT5G16890,AT2G35650,AT5G18220,AT3G61810,AT3G61490,AT2G28470,AT2G23130,AT1G12040,AT5G03260,AT1G18140,AT3G61130,AT5G33290,AT3G07160,AT2G32990,AT3G55430,AT2G43870,AT3G21240,AT1G64440,AT2G26100,AT1G26810,AT5G61840,AT1G14590,AT5G13000,AT5G56590,AT4G17180,AT3G42950,AT3G55250,AT5G58490,AT1G15950,AT5G28840,AT4G38040,AT1G34270,AT2G35610,AT2G25540,AT1G11545,AT5G05250,AT1G19300,AT5G62220,AT2G29040,AT3G15800,AT3G05910,AT2G24800,AT1G30600,AT4G00110,AT1G09580,AT2G04780,AT3G21770,AT4G30170,AT2G18980,AT3G28480,AT5G15470,AT3G28180,AT1G75680,AT2G02400,AT4G33930,AT1G20160,AT4G34980,AT1G08990,AT1G27440,AT5G44820,AT3G62060,AT3G21230,AT2G35100,AT3G06770,AT3G10720,AT3G09410,AT5G64790,AT3G16850,AT5G47500,AT4G02330,AT3G60900,AT4G18670,AT3G14240,AT1G02720,AT2G01630,AT2G46930,AT4G12730,AT1G20480,AT4G22580,AT4G30290,AT5G42100,AT5G20870,AT4G23500,AT2G20750,AT4G37450,AT4G27110,AT5G04230,AT1G20510,AT5G40150,AT5G44530,AT3G62830,AT1G70090,AT2G20370,AT5G17420,AT5G09760,AT4G38400,AT5G66280,AT1G60450,AT1G20190,AT4G31370,AT1G44970,AT1G63000,AT5G03170,AT1G18580,AT2G31960,AT1G05310,AT4G19410,AT4G13710,AT5G60490,AT1G26250,AT5G19890,AT1G76160,AT2G19170,AT1G53500,AT5G53370,AT4G12420,AT1G17890,AT4G29360,AT5G18480,AT3G57630,AT1G19360,AT5G44030,AT3G23730,AT3G24670,AT4G33910,AT3G46440,AT4G02500,AT4G16120,AT1G26570,AT1G77130,AT3G02350,AT5G41870,AT5G56320,AT1G65060,AT2G47650,AT2G20810,AT5G63810,AT1G04680,AT3G12660,AT2G30490,AT2G31430,AT5G22940,AT4G23820,AT5G60920,AT5G45650,AT1G24170,AT1G13250,AT4G19810,AT3G59010,AT3G17070,AT1G74380,AT4G31140,AT5G55730,AT5G48450,AT5G42720,AT5G51890,AT3G62660,AT3G52840,AT2G33790,AT2G21730,AT5G22740,AT1G70710,AT5G13870,AT3G07010,AT5G67360,AT3G18660,AT3G43270,AT5G02260,AT5G64120,AT5G63180,AT5G44130,AT2G28110,AT2G21890,AT5G63380,AT1G05170,AT2G29130,AT1G41830,AT5G58480,AT5G63800,AT5G15630,AT1G05260,AT3G09220,AT4G38420,AT5G41460,AT4G33220,AT5G39580,AT1G64390,AT5G15490,AT4G00300,AT3G19450,AT3G23820,AT5G05170,AT4G32410,AT3G09540,AT2G32430,AT1G67750,AT2G22900,AT3G07320,AT4G22010,AT2G26440,AT2G45470,AT2G40890,AT4G33870,AT1G45130,AT5G56870,AT1G53830,AT4G30440,AT2G21140,AT3G28550,AT5G64100,AT5G03760,AT2G06850,AT5G48900,AT5G20710,AT4G21960,AT3G01190,AT3G49220,AT5G60020,AT4G39350,AT1G05570,AT5G54160,AT2G38080,AT1G76790,AT5G39320,AT5G09870,AT2G05920,AT3G14310,AT4G38770,AT2G36870,AT2G04160,AT5G17820,AT1G71695,AT3G04010,AT4G02290,AT5G59090,AT3G54580,AT3G14067,AT1G23720,AT4G37800,AT4G39330,AT2G37130,AT4G14130,AT3G44990,AT5G51750,AT2G43050 JAMET_CWGS_5OR11D_UP Up- regulated Cell Wall Genes (CWGs) with high levels of transcripts in either 5- or 11-day-old hypocotyls (File 2 PubmedID:19878582) AT3G13520,AT5G53250,AT3G61640,AT1G67750,AT4G24780,AT5G11740,AT4G28250,AT1G69530,AT4G12880,AT1G08500,AT5G15350,AT1G69460,AT5G58090,AT4G30270,AT2G14890,AT5G10430,AT3G24480,AT5G18900 JAMET_CWGS_5DOR11D_DN Down- regulated Cell Wall Genes (CWGs) with high levels of transcripts in either 5- or 11-day-old hypocotyls (File 2 PubmedID:19878582) AT2G32300,AT1G03870,AT5G48930,AT1G32170,AT2G01850,AT2G40610,AT1G28290,AT1G08200,AT5G58490,AT1G11545,AT3G05910,AT3G21770,AT2G04780,AT3G14240,AT4G12730,AT4G30290,AT5G42100,AT1G76160,AT1G19360,AT1G77130,AT2G30490,AT1G04680,AT4G23820,AT5G60920,AT3G07010,AT5G67360,AT5G02260,AT5G64120,AT2G28110,AT1G41830,AT1G05260,AT1G64390,AT5G15490,AT4G00300,AT5G05170,AT4G32410,AT2G22900,AT2G40890,AT4G33870,AT2G45470,AT1G45130,AT5G56870,AT2G21140,AT2G06850,AT5G48900,AT4G21960,AT3G49220,AT5G54160,AT4G39350,AT1G76790,AT5G39320,AT5G09870,AT2G05920,AT3G14310,AT4G38770,AT1G71695,AT3G04010,AT4G02290,AT5G59090,AT3G14067,AT4G39330,AT2G37130,AT4G14130,AT5G51750,AT2G43050 JAMET_SPGS_5-11-DAY-HYPOCOTYL_HIGH_UP Up- regulated Secretory Pathway Genes (SPGs) with moderate or high levels of transcripts in 5- and 11-day-old hypocotyls (File 3 PubmedID:19878582) AT2G05440,AT3G60140,AT5G14180,AT5G40960,AT1G74670,AT4G38080,AT1G52400,AT3G18280,AT3G54260,AT3G49780,AT1G55240,AT3G13520,AT4G09530,AT1G53650,AT2G02120,AT5G53250,AT2G05540,AT2G14900,AT5G18850,AT1G73260,AT5G05960,AT5G43460,AT3G17520,AT5G15230,AT3G21360,AT2G43510,AT5G58375,AT3G61640,AT5G03460,AT2G24040,AT2G41260,AT1G65720,AT5G14105,AT4G24780,AT1G67785,AT5G11740,AT1G02850,AT4G28250,AT1G21680,AT4G30660,AT2G38390,AT1G78895,AT1G26820,AT3G01950,AT2G47930,AT1G62240,AT2G13820,AT4G16515,AT2G20510,AT5G20520,AT1G69530,AT2G45180,AT1G24450,AT1G09460,AT5G17190,AT4G04800,AT5G61160,AT2G31090,AT5G40730,AT4G25260,AT3G44100,AT5G46730,AT2G27385,AT3G22640,AT4G30450,AT2G32380,AT4G00860,AT4G14420,AT2G31980,AT1G71950,AT1G72230,AT2G25110,AT3G53980,AT1G68220,AT2G41470,AT1G69980,AT4G02370,AT4G12880,AT1G08500,AT5G47550,AT1G77350,AT5G51550,AT1G48440,AT1G80860,AT5G15350,AT2G42390,AT4G16980,AT5G62200,AT4G36010,AT1G36980,AT5G58090,AT3G51730,AT2G35850,AT5G56170,AT5G40480,AT1G08210,AT2G05520,AT3G24660,AT4G30270,AT1G18520,AT5G61820,AT5G01075,AT1G61740,AT1G08800,AT5G64310,AT4G16500,AT1G43580,AT5G58640,AT5G66390,AT1G51890,AT1G62810,AT2G28490,AT1G17860,AT3G20500,AT3G22620,AT1G28580,AT2G01890,AT2G39780,AT1G28400,AT3G03330,AT5G53870,AT1G02816,AT3G07460,AT2G14890,AT1G69295,AT5G10430,AT3G11780,AT3G52360,AT1G27520,AT3G61820,AT2G16005,AT2G28950,AT3G24480,AT5G45670,AT5G36290,AT1G27950,AT1G21670,AT4G01985,AT5G26740,AT5G19590,AT1G27930,AT3G15480,AT5G18630,AT1G07080,AT3G43720,AT4G23690,AT1G53840,AT3G45040,AT2G34250,AT1G78040,AT5G38980,AT5G20330,AT2G05380,AT5G01800,AT2G00230,AT1G55260,AT4G31130 JAMET_SPGS_5-11-DAY-HYPOCOTYL_HIGH_DN Down- regulated Secretory Pathway Genes (SPGs) with moderate or high levels of transcripts in 5- and 11-day-old hypocotyls (File 3 PubmedID:19878582) AT3G19320,AT1G76090,AT4G16190,AT2G23810,AT3G09090,AT3G57030,AT4G29720,AT5G08380,AT3G02875,AT1G03870,AT2G32300,AT4G27120,AT1G27000,AT1G27190,AT3G09570,AT4G28050,AT4G27790,AT1G32400,AT4G27300,AT3G54080,AT5G44020,AT2G12845,AT3G01100,AT1G32170,AT1G70530,AT2G04690,AT2G01850,AT1G09970,AT3G12880,AT2G40610,AT5G19120,AT1G28290,AT1G68100,AT1G61150,AT5G11420,AT3G51580,AT5G56660,AT5G03260,AT1G03880,AT2G15050,AT3G10080,AT1G48480,AT5G03610,AT1G47310,AT3G17430,AT5G01460,AT5G25100,AT1G11545,AT1G12090,AT3G05910,AT4G01320,AT5G16000,AT1G73330,AT3G18050,AT1G30130,AT2G04780,AT3G21770,AT5G21105,AT5G20950,AT1G20160,AT3G10450,AT3G25290,AT2G44450,AT5G48380,AT1G61900,AT5G49720,AT5G24620,AT2G30900,AT4G01610,AT3G14240,AT5G19740,AT2G37710,AT2G22170,AT4G39840,AT1G29790,AT4G12730,AT3G24160,AT4G30290,AT5G42100,AT2G17120,AT4G35220,AT5G25265,AT3G62580,AT1G53590,AT1G61670,AT4G25830,AT4G49310,AT5G49360,AT1G20190,AT5G61130,AT1G75800,AT4G24330,AT2G17500,AT2G27190,AT2G05790,AT4G19410,AT2G31960,AT1G76160,AT4G12420,AT3G06550,AT5G39570,AT5G19860,AT1G29020,AT1G73980,AT3G05990,AT3G51050,AT1G09390,AT1G09560,AT1G13900,AT3G08930,AT4G26690,AT1G20330,AT5G18520,AT5G06860,AT3G13410,AT2G20990,AT4G36190,AT3G57790,AT1G04680,AT1G51940,AT1G28340,AT2G28315,AT4G23820,AT2G02220,AT3G62360,AT2G38540,AT5G60920,AT4G01450,AT5G52180,AT3G08030,AT1G57680,AT5G48450,AT5G34850,AT1G07230,AT5G42720,AT1G11910,AT4G16563,AT2G33060,AT3G08650,AT2G04850,AT5G42090,AT5G13870,AT3G07010,AT5G67360,AT1G29980,AT1G68560,AT5G02260,AT5G60360,AT1G62290,AT5G64120,AT3G43270,AT5G12200,AT3G14920,AT3G23300,AT5G25460,AT1G05500,AT3G18080,AT3G54400,AT1G31420,AT1G41830,AT3G15950,AT2G39360,AT1G07650,AT1G05260,AT1G53210,AT3G61050,AT2G01820,AT5G13140,AT5G10560,AT1G78680,AT1G53730,AT5G16590,AT2G39180,AT1G78850,AT4G15160,AT2G12400,AT3G20370,AT3G55260,AT3G25700,AT3G15356,AT5G13980,AT5G05170,AT4G32410,AT1G20850,AT1G71980,AT4G39730,AT1G05850,AT1G67750,AT1G78830,AT5G09440,AT2G28670,AT1G51630,AT3G07320,AT4G22010,AT3G27390,AT3G20820,AT3G16370,AT2G45470,AT1G69270,AT4G33870,AT5G10480,AT1G45130,AT1G70710,AT5G56870,AT3G01720,AT3G23150,AT2G21140,AT3G57010,AT2G42840,AT5G08260,AT2G06850,AT5G48900,AT5G43060,AT1G28440,AT3G26720,AT1G25230,AT4G21960,AT3G14220,AT3G49220,AT5G60020,AT2G04570,AT1G30360,AT3G49670,AT1G64390,AT4G39350,AT1G05570,AT3G52500,AT2G38080,AT1G66180,AT5G26000,AT5G25610,AT4G01950,AT4G32460,AT5G09870,AT3G43960,AT5G12940,AT1G64670,AT3G52370,AT4G38220,AT2G05920,AT3G60130,AT3G14310,AT1G54000,AT1G08590,AT4G38770,AT4G29700,AT2G26330,AT3G48460,AT4G32940,AT1G78820,AT4G08950,AT4G22490,AT1G71695,AT4G02290,AT3G04010,AT5G59090,AT3G04290,AT4G36880,AT3G14067,AT5G44380,AT2G37130,AT5G45950,AT2G43590,AT5G20630,AT4G14130,AT3G44990,AT5G51750,AT2G43050,AT5G10770,AT2G34700 JAMET_SPGS_5-11-DAY-HYPOCOTYL_MODULATED_UP Up- regulated Secretory Pathway Genes (SPGs) with modulated levels of transcripts in 5- and 11-day-old hypocotyls (File 4 PubmedID:19878582) AT2G05440,AT3G60140,AT5G14180,AT5G40960,AT1G74670,AT4G38080,AT5G20230,AT3G18280,AT3G54260,AT1G04560,AT3G49780,AT1G55240,AT1G49320,AT3G13520,AT5G05930,AT2G22860,AT5G53650,AT2G02120,AT5G53250,AT3G54940,AT4G27290,AT2G05540,AT2G14900,AT5G18850,AT5G09520,AT1G73260,AT5G05960,AT4G09600,AT5G43460,AT3G45160,AT3G17520,AT5G15230,AT2G43510,AT5G58375,AT5G64510,AT3G61640,AT2G31945,AT1G75830,AT5G03460,AT2G24040,AT4G09030,AT2G41260,AT1G65720,AT3G02885,AT5G14150 JAMET_SPGS_5-11-DAY-HYPOCOTYL_MODULATED_DN Down- regulated Secretory Pathway Genes (SPGs) with modulated levels of transcripts in 5- and 11-day-old hypocotyls (File 4 PubmedID:19878582) AT3G49220,AT5G60020,AT3G49670,AT1G05570,AT1G64390,AT2G38080,AT3G52500,AT1G04800,AT1G66180,AT5G26000,AT5G09870,AT3G43960,AT4G38220,AT2G05920,AT3G60130,AT3G14310,AT2G34080,AT1G08590,AT4G38770,AT2G26330,AT2G36870,AT2G04160,AT4G32940,AT5G17820,AT1G71695,AT3G04010,AT5G59090,AT4G36880,AT5G44380,AT3G14067,AT2G37130,AT2G43590,AT4G14130,AT3G44990,AT5G51750,AT2G43050,AT5G10770 FAHLGREN_21_NT_SIRNA_BIN_UP Over-represented 21 nt siRNA bins (Table S4 PubmedID:19307293) AT1G53230,AT1TE63560,AT2TE16215,AT3TE63395,AT3TE63405,AT5G13120,AT5TE54365,AT5TE63265,AT1G51720,AT1G53233,AT3G43829,AT3TE63400 FAHLGREN_21_NT_SIRNA_BIN_DN Under-represented 21 nt siRNA bins (Table S4 PubmedID:19307293) AT1G12300,AT1G12620,AT1G12775,AT1G48410,AT1G62590,AT1G62670,AT1G62910,AT1G62930,AT1G63070,AT1G63080,AT1G63130,AT1G63150,AT1G63230,AT1G63320,AT1G63330,AT1G63400,AT1G63630,AT1G67481,AT1TE44690,AT1TE46575,AT2G37160,AT2G46800,AT2TE15695,AT2TE21025,AT2TE21420,AT2TE21450,AT3G13370,AT3G57480,AT3TE51300,AT3TE51930,AT3TE52365,AT4G13420,AT4G14615,AT4G19690,AT4G24300,AT4G33300,AT4G36920,AT4TE26710,AT5G02040,AT5G16640,AT5G38850,AT5G41170,AT5G41610,AT5G43740,AT5G61350,AT5TE47200,AT5TE58360,AT5TE63845,AT1TE44695,AT3TE52370,AT1G12780,AT1G62600,AT1G62935,AT1G63090,AT1G63340,AT1TE77410,AT2G46810,AT4TE34215,AT4TE76870,AT5G41612 FAHLGREN_24_NT_SIRNA_BIN_UP Over-represented 24 nt siRNA bins (Table S5 PubmedID:19307293) AT1G15410,AT1G17150,AT1G32140,AT1G32190,AT1G33070,AT1G50600,AT1G50720,AT1G53480,AT1G62940,AT1G65990,AT1G70080,AT1TE13965,AT1TE18370,AT1TE38630,AT1TE49765,AT1TE59755,AT1TE61180,AT1TE62360,AT1TE63560,AT1TE81720,AT1TE86845,AT1TE91400,AT2G01021,AT2G17550,AT2G19200,AT2G29720,AT2G30810,AT2G37720,AT2G41312,AT2TE00095,AT2TE09085,AT2TE13745,AT2TE16215,AT2TE23770,AT2TE70305,AT2TE89040,AT3G19670,AT3G23970,AT3G26280,AT3G43970,AT3G45940,AT3G47540,AT3G49990,AT3TE39565,AT3TE44630,AT3TE47920,AT3TE47925,AT3TE52350,AT3TE63790,AT4G10740,AT4G12570,AT4G12820,AT4G13260,AT4TE24045,AT4TE27065,AT4TE34755,AT4TE43370,AT4TE45320,AT4TE50990,AT4TE62130,AT5G01280,AT5G13120,AT5G25110,AT5G35737,AT5G40020,AT5G40280,AT5G41490,AT5G46930,AT5G47300,AT5TE15245,AT5TE23175,AT5TE36610,AT5TE37885,AT5TE49065,AT5TE51105,AT5TE51155,AT5TE54365,AT5TE57140,AT5TE63265,AT5TE81680,AT1G12620,AT1G16630,AT1G49860,AT1G50740,AT1G51720,AT1G74290,AT1TE49780,AT1TE81725,AT2TE00110,AT2TE13750,AT3TE44650,AT3TE52355,AT4G10200,AT4TE34760,AT4TE62135,AT5G13210,AT5G28463,AT5TE36620,AT5TE51115,AT1TE49785 FAHLGREN_24_NT_SIRNA_BIN_DN Under-represented 24 nt siRNA bins (Table S5 PubmedID:19307293) AT1G26380,AT1G60620,AT1G61320,AT1G62170,AT1G62910,AT1G62930,AT1G63130,AT1G63150,AT1G71692,AT1TE28175,AT1TE33490,AT1TE38985,AT1TE40760,AT1TE40925,AT1TE41625,AT1TE44380,AT1TE52360,AT1TE54915,AT1TE55910,AT1TE61805,AT1TE69805,AT1TE69815,AT1TE78195,AT1TE80300,AT2G05160,AT2G21900,AT2G27229,AT2G36490,AT2G46880,AT2TE05515,AT2TE05690,AT2TE05700,AT2TE08320,AT2TE20155,AT2TE27805,AT2TE44770,AT2TE63330,AT2TE65005,AT3G04720,AT3G20930,AT3G23380,AT3G28750,AT3G43580,AT3G57480,AT3TE42290,AT3TE42300,AT3TE44030,AT3TE46245,AT3TE72850,AT4G04180,AT4G04223,AT4G09000,AT4G13420,AT4G24300,AT4G31200,AT4TE06910,AT4TE18675,AT4TE23875,AT4TE26310,AT4TE26710,AT4TE28065,AT4TE46700,AT4TE58715,AT5G02370,AT5G05830,AT5G17470,AT5G35230,AT5G38005,AT5G39560,AT5G44910,AT5G46295,AT5TE27630,AT5TE30220,AT5TE33595,AT5TE35500,AT5TE36920,AT5TE38010,AT5TE38845,AT5TE40100,AT5TE41875,AT5TE42710,AT5TE49515,AT5TE52200,AT5TE57020,AT5TE58360,AT5TE63830,AT5TE63845,AT5TE68020,AT5TE86765,AT1G62180,AT2TE39610,AT4TE34215,AT5TE20840,AT1TE40770,AT1TE52375,AT1TE69830,AT2G15630,AT4G03070,AT4TE18690,AT5G27610,AT5G35730,AT5TE30230,AT5TE41885 CHANDRAN_LASER-MICRODISSECTED/LEAF_10FC_UP Tissue preparation-associated genes. These genes exhibited a ?10-fold change in expression due to tissue preparation (i.e. in parallel scrape (prepared tissue, amplified) vs.whole leaf-amplified (fresh tissue, amplified) samples). These same 107 genes also exhibited a ?10-fold change in expression when laser microdissected (prepared tissue, laser microdissected, amplified) were compared to whole leaf amplified samples (fresh tissue,amplified) as would be expected if their expression difference was due to the tissue preparation method. (Table S1 PubmedID:20018666) AT5G42380,AT4G29330,ATMG01220,ATMG00060,AT4G27652,AT2G07698,AT5G02490,AT2G07701,AT2G07712,AT1G16040,AT5G25450,AT5G37670,ATMG01210,ATMG01130,ATMG00690,AT2G07707,AT2G07768,AT2G07671,AT5G58770,AT1G66090,ATMG01350,AT2G07711,AT1G66500,AT2G25140,AT2G07723,AT3G07090,AT2G07687,AT3G62260,AT5G12030,AT3G61190,AT2G07699,AT4G25340,AT2G07675,AT2G07722,ATMG00160,AT3G24500,AT5G35320,AT2G19310,AT2G07727,AT1G07400,AT3G12050,ATMG00070,AT1G52560,AT2G07681,ATMG00270,AT3G09350,AT2G29500,AT5G09590,AT2G24100,AT1G01720,AT3G08970,AT1G30070,AT3G46230,AT3G25230,ATMG00640,AT3G16050,AT1G56660,AT1G54050,AT1G01940,AT5G56030,AT2G37710,AT2G07725,AT2G17660,AT1G53540,AT3G07770,ATMG00650,AT2G46240,AT4G10250,AT4G26780,AT1G07350,AT1G62730,AT4G27670,AT4G12400,AT5G59720,AT4G24380,AT1G26800,AT2G32120,ATMG00630,AT5G48570,AT3G28210,AT1G03070,AT2G47180,AT4G34410,AT3G13470,AT1G16030,AT2G20560,AT4G11280,AT2G26150,AT4G33660,AT5G52640,AT1G74310,AT5G12020,AT5G51440,AT4G25200,AT5G47830,AT3G19240,AT5G05410,AT1G61340,AT4G27654,AT1G10090,AT3G12580,AT3G56090,AT4G21320,AT1G17870,AT5G12110,AT5G62520,AT1G71000 CHANDRAN_PM_LMD_DIFF Known PM-impacted genes enriched in LMD Dataset (Table S2A PubmedID:20018666) AT1G04750,AT1G54040,AT1G59870,AT1G74710,AT1G75040,AT2G01650,AT2G04400,AT2G14610,AT2G20610,AT2G33120,AT2G44490,AT3G11820,AT3G13790,AT3G14210,AT3G18830,AT3G19930,AT3G50480,AT3G52400,AT3G52430,AT3G54640,AT3G57260,AT4G31500,AT4G39950,AT5G05730,AT5G11110,AT5G13320,AT5G44070,AT5G57220,AT5G61210,AT4G27090 CHANDRAN_LMD_PM-ALTERED_UP Up-regulated LMD genes with PM-altered expression (Table S2B PubmedID:20018666) AT1G02930,AT3G18250,AT2G14610,AT1G75040,AT3G57260,AT2G02930,AT1G65820,AT1G14870,AT1G76960,AT5G37600,AT5G05730,AT2G18660,AT5G64000,AT4G24190,AT2G38860,AT5G02380,AT5G56150,AT1G05010,AT2G39400,AT3G49120,AT2G04400,AT3G51860,AT1G53310,AT1G52600,AT1G72060,AT5G66680,AT3G50480,AT3G01280,AT1G35720,AT1G65500,AT1G10340,AT1G17745,AT3G01290,AT4G11890,AT2G43570,AT4G38540,AT5G10380,AT2G20530,AT5G07340,AT1G13110,AT5G51070,AT2G01060,ATMG00050,AT5G22250,AT1G22300,AT3G11280,AT1G56700,AT2G04900,AT2G24550,AT3G51920,AT3G24503,AT5G63680,AT5G40670,AT1G09210,AT1G22920,AT5G11000,AT5G20950,AT5G52740,AT3G02840,AT4G27450,AT5G10710,AT2G26440,AT3G07600,AT2G23170,AT3G60540,AT4G39670,AT4G21150,AT5G50460,AT5G18310,AT3G13790,AT4G30190,AT2G35020,AT2G47470,AT5G24530,AT4G00700,AT3G55830,AT4G33050,AT4G16450,AT2G24945,AT1G16670,AT3G50590,AT2G44100,AT2G18690,AT3G13930,AT5G48540,AT4G32940,AT2G30860,AT5G10760,AT5G40780,AT1G19020,AT4G21830,AT1G13350,AT1G13750,AT3G13910,AT5G52750,AT1G45145,AT3G19930,AT2G47380,AT5G26830,AT3G02740,AT1G33960,AT3G45860,AT1G08450,AT5G60950,AT1G63460,AT2G43510,AT3G17240,AT1G03290,AT1G05575,AT4G14420,AT5G52760,AT1G68000,AT1G27330,AT1G36050,AT2G22480,AT2G35930,AT5G21090,AT5G53870,AT5G10840,AT3G54960,AT3G17790,AT4G38260,AT5G08380,AT3G19740,AT1G69340,AT3G54640,AT1G67560,AT2G24850,AT1G61780,AT3G52730,AT3G27240,AT1G19250,AT1G13340,AT5G17380,AT1G72160,AT3G09390,AT3G04120,AT1G57630,AT4G24920,AT1G75270,AT2G04450,AT2G17120,AT2G39660,AT2G33040,AT5G18420,AT2G29120,AT5G54760,AT2G30550,AT2G40360,AT4G23220,AT3G10930,AT5G24110,AT1G74210,AT1G19130,AT2G38870,AT5G40370,AT1G04410,AT4G14800,AT3G28480,AT4G22150,AT3G07230,AT2G28890,AT2G44080,AT2G42310,AT1G08830,AT5G35680,AT1G72020,AT1G08480,AT1G20980,AT1G77510,AT3G01520,AT4G31500,AT3G03300,AT2G29350,AT5G49540,AT5G55070,AT5G38900,AT2G41090,AT3G62600,AT2G46560,AT5G02290,AT1G51920,AT3G06690,AT2G29420,AT4G20110,AT4G35230,AT2G01650,AT3G51430,AT2G19130,AT1G05570,AT2G02810,AT3G07680,AT2G45790,AT1G09130,AT4G34200,AT5G61210,AT4G02030,AT2G31350,AT3G28540,AT3G43520,AT1G63840,AT3G03250,AT3G23250,AT3G13670,AT3G17020,AT2G44350,AT1G13990,AT3G03990,AT5G58710,AT5G43460,AT5G51040,AT1G72520,AT5G15320,AT1G29310,AT3G60450,AT1G08310,AT1G24510,AT5G12170,AT4G33250,AT2G31090,AT1G16890,AT4G26970,AT1G23960,AT5G14780,AT1G23140,AT4G35600,AT1G66960,AT4G39830,AT1G64520,AT5G20050,AT1G27970,AT3G05970,AT1G05720,AT5G39950,AT1G26550,AT3G53890,AT4G14716,AT3G48570,AT3G11230,AT5G20660,AT3G10860,AT5G13430,AT3G44340,AT2G39990,AT2G42790,AT3G20510,AT3G13410,AT1G19310,AT4G11010,AT2G44360,AT3G30720,AT2G26670,AT5G63030,AT5G50900,AT3G13920,AT2G03510,AT4G11380,AT2G05520,AT1G66680,AT1G55840,AT1G09630,AT4G29040,AT5G59820,AT4G23470,AT2G18680,AT4G16520,AT5G44580,AT2G26240,AT3G07030,AT4G39950,AT1G52890,AT1G72680,AT3G26280,AT3G26740,AT4G18930,AT1G15120,AT1G75130,AT5G62740,AT2G22660,AT4G10970,AT1G32790,AT5G20900,AT3G63420,ATMG01040,AT2G02510,AT4G16330,AT1G15880,AT1G32940,AT3G54840,AT1G56330,AT2G29020,AT3G10090,AT5G20090,AT2G33120,AT5G08300,AT1G55210,AT3G46560,AT5G10980,AT1G55850,AT3G57890,AT3G07110,AT1G19330,AT2G19540,AT4G31985,AT5G42980,AT2G03680,AT4G13850,AT4G10500,AT4G21105,AT1G09430,AT1G16740,AT4G29520,AT5G59140,AT1G70160,AT5G45010,AT1G28480,AT1G61790,AT5G07400,AT3G03920,AT4G23150,AT5G22270,AT4G29660,AT3G29090,AT3G13060,AT5G47910,AT5G20570,AT2G22425,AT1G02475,AT1G71010,AT1G69750,AT1G23290,AT5G66040,AT1G51760,AT2G26660,AT3G16080,AT4G16710,AT5G52820,AT1G56060,AT2G30140,AT3G18035,AT5G07830,AT3G18480,AT5G33290,AT2G45070,AT1G51890,AT2G46540,AT1G74710,AT5G42300,AT1G31580,AT2G02390,AT5G20990,AT4G30270,AT5G02100,AT5G66760,AT1G03900,AT1G25520,AT5G57030,AT2G29700,AT2G27730,AT1G10590,AT1G67940,AT5G19550,AT3G22370,AT5G54860,AT5G59880,AT3G54110,AT5G50400,AT2G40765,AT1G22840,AT2G24180,AT5G18780,AT1G74340,AT1G58180,AT3G60190,AT5G67600,AT3G62290,AT3G57090,AT2G23090,AT2G38740,AT2G33470,AT4G03030,AT4G25630,AT3G27890,AT2G39550,AT3G56460,AT5G61790,AT3G51130,AT5G64350,AT1G66240,AT1G15270,AT2G47250,AT3G51890,AT5G61590,AT5G15490,AT1G77420,AT5G54500,AT1G61570,AT5G48380,AT1G76150,AT1G53780,AT5G48590,AT1G23840,AT2G47440,AT5G26920,AT1G22750,AT3G57480,AT1G11890,AT2G25070,AT3G57240,AT5G63980,AT4G17830,AT4G29350,AT3G59920,AT3G25800,AT1G17160,AT3G46040,AT1G79380,AT4G21160,AT2G07691,AT5G59890,AT3G43590,AT2G20820,AT2G07728,AT4G23010,AT3G06860,AT3G07910,AT3G06700,AT5G19440,AT3G01740,AT3G44010,AT1G02500,AT5G38890,AT2G30770,AT1G22410,AT3G23600,AT3G57870,AT5G05370,AT2G40740,AT5G08290,AT3G24830,AT3G12200,AT5G66320,AT2G44525,AT2G46390,AT2G38710,AT2G05630,AT1G45000,AT3G13330,AT4G03960,AT1G32460,AT1G56450,AT1G61250,AT1G31910,AT2G45170,AT1G27980,AT2G34470,AT2G30110,AT4G36030,AT1G01730,AT5G04750,AT3G48780,AT5G03290,AT1G06650,AT3G11940,AT1G53280,AT2G05710,AT1G56340,AT2G32680,AT3G60860,AT2G20670,AT1G67350,AT4G39640,AT1G03860,AT1G53030,AT5G53120,AT5G58420,AT1G18540,AT3G62150,AT1G08940,AT1G76200,AT3G24160,AT2G05940,AT2G30930,AT5G51940,AT1G28680,AT1G80420,AT2G20610,AT5G55190,AT4G33640,AT5G20400,AT1G62840,AT5G47200,AT5G39570,AT1G67250,AT1G21370,AT3G24170,AT1G18720,AT1G34130,AT3G04090,AT1G78380,AT2G47320,AT4G24220,AT4G16430,AT3G08610,AT4G24470,AT4G21620,AT1G66580,AT5G67330,AT4G14410,AT2G27020,AT4G39940,AT2G41410,AT1G51650,AT1G29850,AT1G14320,AT3G03470,AT5G59210,AT3G27310,AT4G17230,AT1G61730,AT5G58740,AT4G27230,AT3G09735,AT5G67490,AT2G14750,AT2G31570,AT5G52020,AT1G03210,AT4G31180,AT5G52560,AT2G20570,AT5G03850,AT2G36160,AT1G14000,AT3G26220,AT5G36880,AT2G47170,AT5G47220,AT1G18160,AT3G52400,AT4G19860,AT5G64300,AT3G44750,AT2G17980,AT5G53550,AT4G00860,AT3G03160,AT1G47640,AT5G18190,AT5G26030,AT1G56140,AT4G18040,AT3G15580,AT3G55410,AT1G54030,AT4G29735,AT4G21980,AT4G22190,AT2G27600,AT3G51000,AT3G49010,AT4G21850,AT3G11730,AT3G56360,AT1G77710,AT1G21900,AT5G23740,AT5G44320,AT5G16970,AT2G47640,AT2G36530,AT1G77940,AT1G50430,AT1G15400,ATMG01060,AT4G21810,AT3G47810,AT1G35620,AT3G26340,AT5G57020,AT3G44100,AT3G49490,AT2G17740,AT4G28460,AT4G33865,AT5G51620,AT5G20560,AT4G23040,AT1G20050,AT5G19140,AT1G07750,AT1G21770,AT3G19910,AT2G43970,AT5G43260,AT5G53330,AT3G10210,AT4G38920,AT5G48370,AT5G63800,AT1G28580,AT3G15290,AT1G54770,AT5G20290,AT3G46430,AT5G53140,AT1G29940,AT1G79940,AT2G45330,AT4G23885,AT5G37070,AT3G45980,AT3G24560,AT5G61530,AT4G36760,AT5G42320,AT2G40600,AT3G56800,AT5G65430,AT5G42790,AT5G05010,AT2G03870,AT4G21610,AT4G15800,AT4G33950,AT1G71860,AT1G56110,AT1G08880,AT4G02080,AT5G20920,AT3G53020,AT3G17000,AT5G55290,AT4G32470,AT4G33510,AT2G40590,AT5G22950,AT3G23580,AT1G74090,AT2G43350,AT1G07610,AT1G09780,AT5G42020,AT1G57720,AT1G62020,AT2G15570,AT3G10370,AT4G40030,AT1G67860,AT5G27840,AT1G47420,AT4G02930,AT3G04400,AT3G15540,AT5G13190,AT1G16470,AT4G27960,AT1G65720,AT2G31880,AT2G02050,AT4G30490,AT5G13320,AT1G68520,AT3G12980,AT5G20500,AT1G66410,AT3G52880,AT1G12360,AT1G24440,AT1G27930,AT1G49140,AT3G53630,AT5G65720,AT4G09800,AT5G65910,AT3G12570,AT3G18830,AT1G19910,AT2G42680,AT4G17420,AT2G31110,AT3G25220,AT1G16000,AT1G29880,AT1G34190,AT4G15475,AT1G48900,AT1G43170,AT1G34030,AT2G11810,AT2G13560,AT5G06530,AT3G25010,AT1G19120,AT4G05070,AT5G38650,AT3G18430,AT3G10640,AT1G04750,AT4G07390,AT4G35460,AT2G14720,AT1G70490,AT3G22200,AT2G45510,AT5G47050,AT3G19970,AT3G56310,AT4G02980,AT3G61110,AT3G62830,AT2G35790,AT3G05230,AT1G30500,AT4G19400,AT3G07480,AT2G07180,AT2G19760,AT5G43780,AT1G16210,AT3G48140,AT1G50370,AT3G47836,AT5G61500,AT1G14820,AT1G12710,AT5G56670,AT1G79710,AT5G15400,AT4G14320,AT1G28660,AT3G12650,AT4G02060,AT5G57660,AT5G52240,AT2G04390,AT5G38630,AT2G35050,AT1G06890,AT4G09320,AT1G07170,AT5G55850,AT3G26640,AT4G26570,AT3G19490,AT3G10380,AT1G62040,AT1G30230,AT1G47260,AT2G25210,AT5G02790,AT3G18860,AT3G10420,AT5G06820,AT3G29075,AT5G46430,AT1G51200,AT1G48920,AT4G34450,AT5G11520,AT4G20840,AT4G23710,AT3G22330,AT2G26230,AT1G74270,AT5G39510,AT1G48160,AT5G35080,AT2G47710,AT3G07580,AT3G32930,AT4G10790,AT5G52840,AT1G60610,AT2G25510,AT3G23300,AT5G27850,AT4G22750,AT1G27530,AT1G64850,AT4G10840,AT3G22845,AT1G21270,AT5G58290,AT4G36800,AT3G21865,AT3G55520,AT5G11510,AT3G09970,AT5G54310,AT1G42480,AT1G67360,AT4G26840,AT3G09810,AT4G22310,AT5G42890,AT1G30640,AT5G47570,AT1G04270,AT2G31490,AT3G48680,AT5G58630,AT3G15352,AT3G52590,AT1G29970,AT4G02580,AT3G13310,AT1G27820,AT3G23290,AT5G65110,AT3G11810,AT2G21870,AT5G08670,AT3G58170,AT5G10860,AT3G62400,AT2G37410,AT5G57060,AT5G49500,AT1G31550,AT3G53430,AT3G52430,AT4G22820,AT3G55770,AT2G28430,AT4G25030,AT2G23810,AT2G43000,AT5G52470,AT3G09680,AT1G78210,AT5G58350,AT4G39200,AT5G14040,AT5G14030,AT5G45775,AT5G42030,AT4G03020,AT4G20330,AT2G26780,AT3G12490,AT5G54160,AT4G16720,AT3G47833,AT2G40205,AT4G29390,AT5G03345,AT4G24690,AT5G16880,AT3G21430,AT2G01490,AT3G17810,AT4G15470,AT5G16070,AT5G43440,AT1G73030,AT5G20230,AT1G78280,AT5G07470,AT5G62440,AT2G17380,AT3G15590,AT2G19710,AT3G11010,AT5G41560,AT2G01540,AT1G03330,AT4G37830,AT1G48140,AT1G75510,AT4G35360,AT3G23280,AT2G28720,AT5G61970,AT1G50120,AT1G09690,AT4G28260,AT2G29070,AT1G56070,AT2G46400,AT4G23140,AT1G27000,AT5G18380,AT2G38280,AT3G55970,AT1G78620,AT1G78460,AT4G31170,AT1G32920,AT2G28860,AT4G39100,AT1G78420,AT3G02070,AT3G60340,AT2G15230,AT3G03890,AT2G36880,AT4G10480,AT1G60870,ATMG01270,AT3G06310,AT2G17130,AT5G32440,AT5G02450,AT4G24450,AT4G28770,AT1G31812,AT1G69270,AT2G32970,AT1G55920,AT1G76520,AT3G03790,AT5G63670,AT2G25000,AT3G60640,AT1G36640,AT5G11110,AT1G50940,AT2G01180,AT1G42990,AT1G52300,AT3G59060,AT1G04810,AT1G67970,AT5G10170,AT3G43740,AT5G04930,AT3G05500,AT1G80940,AT3G27210,AT3G46620,AT3G05590,AT1G63880,AT5G33390,AT5G27170,AT1G72450,AT5G55920,AT2G05840,AT3G12390,AT4G27880,AT4G32150,AT3G22630,AT5G01650,AT3G53500,AT4G27270,AT1G14980,AT1G22780,AT2G47790,AT2G28080,AT5G08520,AT5G03350,AT3G22320,AT3G19640,AT1G56280,AT1G60970,AT2G47240,AT5G42270,AT3G49720,AT2G41530,AT3G04680,AT3G04780,AT5G14800,AT2G28120 CHANDRAN_LMD_PM-ALTERED_DN Down-regulated LMD genes with PM-altered expression (Table S2B PubmedID:20018666) AT4G00370,AT5G47840,AT5G56010,AT4G20450,AT3G59970,AT2G38350,AT1G72390,AT3G51360,AT1G33000,AT1G54180,AT3G03230,AT5G28140,AT3G22770,AT5G51480,AT4G23890,AT4G30440,AT3G07660,AT2G42770,AT3G13980,AT4G12040,AT2G24780,AT1G14420,AT3G33064,AT3G06780,AT1G65350,AT5G15180,AT1G65330,AT3G17170,AT5G54270,AT1G04150,AT1G02530,AT1G36550,AT4G33900,AT5G17480,AT3G63410,AT1G22590,AT5G12150,AT4G01050,AT5G23660,AT4G14210,AT5G04810,AT5G50960,AT5G25050,AT2G04039,AT4G09930,AT3G63490,AT5G51270,AT4G35950,AT2G43500,AT1G56300,AT2G25150,AT3G47340,AT5G07260,AT1G50560,ATCG01020,AT4G37450,AT5G01530,AT2G27680,AT5G06340,AT1G76190,AT4G08140,AT3G14300,AT5G39700,AT5G13140,AT1G67310,AT3G01580,AT1G77820,AT4G03280,AT5G35130,AT3G08940,AT5G58310,AT3G46330,AT3G25855,AT3G52960,AT2G38620,AT2G18700,AT3G09820,AT2G10650,AT1G23420,AT3G21070,AT1G34530,AT1G27120,AT2G11590,AT3G50820,AT3G16040,AT1G70470,AT4G07540,AT3G16770,AT2G21380,AT2G30950,AT5G40930,AT2G43200,AT5G38030,AT5G28550,AT3G03170,AT5G62140,AT5G51600,AT3G43130,AT2G17450,AT4G34970,AT5G06400,AT4G14360,AT1G45100,AT1G79790,AT3G14000,AT2G36250,AT1G74880,AT1G73470,AT2G45770,AT3G23330,AT5G48140,AT4G08685,AT2G05960,AT3G16090,AT4G25950,AT5G25130,AT3G05030,AT4G17540,AT1G67580,AT5G65685,AT5G51650,AT1G07150,AT1G32030,AT3G49050,AT4G12330,AT1G08520,AT3G44210,AT5G14270,AT2G11270,AT3G55040,AT5G56780,AT3G28360,AT3G01140,AT1G16080,AT1G14150,AT4G35560,AT2G24790,AT3G46020,AT1G09950,AT5G37990,AT4G18240,AT1G15820,AT5G40360,AT3G56880,AT3G04450,AT5G58470,AT1G26850,AT5G15960,AT5G38140,AT5G46710,AT5G51110,AT5G51550,AT1G76880,AT3G44960,AT2G25620,AT1G56410,AT1G75860,AT5G52920,ATCG00280,AT4G01830,AT5G18590,AT5G03920,AT4G15560,ATCG00820,AT3G05900,AT2G38140,AT4G24930,AT3G02890,AT1G08540,AT1G61450,AT4G12830,AT1G64510,AT1G75350,AT3G59400,AT2G35880,AT1G50620,AT1G11160,AT5G04140,AT2G40760,AT1G29910,AT3G50685,AT5G03000,AT5G48880,AT1G32830,AT5G16200,AT5G58200,AT2G17260,AT2G47280,AT4G07790,AT4G31780,AT4G39420,AT1G75080,AT5G08590,ATCG00130,AT4G16155,AT1G13560,AT4G27600,AT5G14970,AT1G03600,AT4G02790,AT3G60020,AT3G51820,AT4G02920,AT3G63160,AT5G65790,AT1G60550,AT1G50900,AT2G01280,AT1G08980,AT4G25480,AT5G57340,AT2G29180,AT5G66570,ATCG01080,AT2G28900,AT3G61870,AT5G12950,AT4G22890,AT1G55370,AT2G35570,AT1G01120,AT5G20470,AT5G66190,AT3G50060,AT1G54040,ATCG00840,AT3G60750,AT5G24490,AT5G37050,AT1G49230,ATCG00870,AT1G30520,AT5G42650,AT3G13270,AT1G72860,AT1G56650,AT5G13120,AT2G29670,AT5G17710,AT3G24430,AT5G66100,AT3G23630,AT5G64860,AT3G15520,AT5G65010,AT4G03690,AT2G25800,AT3G56910,AT3G17130,AT1G07320,AT5G15600,AT1G03630,AT4G32340,AT1G05190,AT3G13900,AT5G44500,AT1G67740,ATCG00420,AT2G36910,AT2G35650,AT2G30600,AT2G39820,AT1G74970,AT1G56500,AT3G54210,AT1G56190,AT1G44575,AT1G06680,AT3G53800,AT1G42970,AT5G48770,ATCG00040,AT2G47510,AT5G55220,AT5G40850,AT1G43590,AT1G35680,AT5G14650,AT3G08920,AT2G46910,AT4G03430,AT3G19480,AT5G17670,AT5G35170,AT1G18060,AT1G64720,AT1G13650,AT5G55180,AT5G14910,AT3G27160,AT1G21500,AT1G27510,AT4G24750,AT1G14345,AT1G74730,ATCG00330,AT2G36200,ATCG01230,AT3G55800,AT3G52380,AT1G10180,AT5G54600,AT4G30950,AT2G47910,AT3G01480,AT5G49030,AT2G21170,AT1G11860,AT1G24090,AT2G46340,AT1G35420,AT2G46820,AT2G21280,AT4G24770,AT5G57650,AT1G66860,AT2G21330,AT2G34560,AT5G36170,AT3G10940,AT3G48560,AT5G65220,AT2G24060,AT4G31800,AT2G18560,AT1G67700,AT4G12410,ATCG00430,AT5G63330,AT5G19940,AT2G23340,AT3G47860,ATCG00650,AT5G35360,AT4G34090,AT5G63060,AT1G51080,AT1G48450,AT1G58290,AT4G00310,AT3G51510,AT5G04970,ATCG01070,AT3G11170,AT5G11420,ATCG01060,AT1G13830,ATCG00780,AT2G21385,AT1G75680,ATCG00065,AT3G29185,AT1G73060,AT1G20450,AT1G64020,AT1G70370,AT1G07370,AT5G53580,AT4G23820,AT4G34260,AT1G69523,AT5G47190,AT4G09650,AT5G62670,AT3G61060,AT2G42380,ATCG01120,ATCG00360,AT1G71500,AT3G11630,AT4G29770,AT1G11720,AT3G28860,AT1G26270,AT5G08650,AT3G23050,AT4G25670,AT4G09010,AT3G06750,AT5G58870,AT1G57770,AT2G33800,AT5G28430,AT4G27350,AT3G23700,AT5G45680,AT4G29060,AT3G62700,AT1G29070,AT4G27030,AT3G62910,AT3G26950,AT5G50740,AT2G05920,ATCG00170,AT1G15980,AT2G12400,AT1G51110,ATCG00860,AT4G24510,AT3G25660,ATCG00800,AT1G04420,AT4G17600,AT1G55490,AT3G01210,AT5G43750,AT5G64740,AT4G33905,AT5G14660,AT5G44020,AT1G01090,AT2G40400,AT5G65630,AT3G08740,AT5G03940,AT4G37550,ATCG00710,AT5G23120,AT4G23060,AT1G69526,AT1G18730,AT2G34680,AT1G65390,AT4G24340,AT4G30690,AT1G12900,AT3G61080,AT5G64230,AT3G12780,AT2G46900,AT1G79500,AT3G63140,AT1G01790,AT1G08550,AT1G77490,AT2G43030,ATCG00520,ATCG00770,AT1G10370,AT5G51720,AT5G01920,AT3G25920,AT4G12970,ATCG01110,AT5G63310,AT5G44520,AT2G42220,AT1G20440,AT4G35250,AT1G32080,AT4G39970,AT3G16250,AT3G54050,ATCG00050,AT1G15410,AT2G34620,AT4G25080,ATCG00160,ATCG00790,AT1G20010,AT1G19150,AT1G74470,AT5G04610,AT3G26710,AT1G73920,AT3G46780,AT3G10720,AT4G39890,AT4G36010,AT3G19820,AT5G52310,AT3G01500,ATCG00810,AT2G18710,AT5G64460,AT5G62360,AT3G63350,AT5G18660,AT5G58090,AT5G09870,AT4G31290,AT4G26530,AT2G10940,AT3G19270,AT1G09750,AT1G29395,AT5G60790,AT2G42270,AT1G01620,AT1G10170,AT2G29290,AT3G27690,AT5G01015,AT2G38540,AT2G05790,AT4G04840,AT5G48490,AT3G16240,AT1G12090,AT4G18280,AT4G24960 CHANDRAN_LEAF_PM-ALTERED_5DPI_UP Up-regulated whole leaf genes with PM-altered expression at 5 dpi (Table S2B PubmedID:20018666) AT2G23170,AT3G18250,AT2G30770,AT4G23700,AT1G51890,AT1G21240,AT2G29460,AT2G14610,AT3G26830,AT4G04490,AT3G54700,AT4G23150,AT1G26420,AT5G64000,AT1G33030,AT3G22600,AT3G47420,AT4G29520,AT5G52740,AT4G21830,AT5G46050,AT5G64510,AT2G18660,AT4G04500,AT1G26380,AT3G45290,AT2G30750,AT3G09940,AT5G65600,AT4G21850,AT3G51860,AT1G79680,AT2G43570,AT1G14870,AT1G09080,AT4G11890,AT4G00700,AT4G12290,AT1G56600,AT4G10500,AT1G76960,AT1G04980,AT2G13810,AT4G38540,AT1G26390,AT1G19250,AT5G38900,AT1G66960,AT4G34131,AT5G11920,AT1G55210,AT2G38860,AT2G39220,AT2G32680,AT1G07090,AT1G74360,AT2G30140,AT1G77510,AT1G08310,AT4G23310,AT3G55130,AT1G30900,AT5G18470,AT4G28390,AT5G47220,AT4G16260,AT5G39670,AT3G25010,AT1G57630,AT5G61790,AT1G17745,AT1G05300,AT1G13340,AT4G23140,AT4G36988,AT5G10740,AT5G13320,AT4G18250,AT2G01670,AT2G02810,AT5G41410,AT3G51330,AT1G02930,AT1G61800,AT3G57260,AT5G42020,AT5G67340,AT3G26210,AT2G04450,AT1G21120,AT3G60540,AT3G28540,AT2G04400,AT2G29120,AT1G63380,AT3G20250,AT3G62600,AT3G44450,AT3G51660,AT1G75170,AT1G64400,AT1G33960,AT1G27980,AT2G47130,AT5G27600,AT1G21110,AT2G17290,AT4G35630,AT5G25910,AT2G33480,AT5G01540,AT5G37600,AT5G10760,AT4G23810,AT3G54150,AT1G20350,AT2G19190,AT1G78410,AT5G15860,AT1G74710,AT5G09290,AT1G08050,AT1G77920,AT5G38250,AT2G38870,AT1G75040,AT1G32940,AT5G17860,AT2G47000,AT5G20960,AT2G47800,AT2G15480,AT4G01720,AT4G24190,AT5G63680,AT3G26230,AT1G67970,AT5G45380,AT1G66880,AT3G50930,AT5G12420,AT4G13920,AT3G28580,AT4G05020,AT1G12320,AT2G18690,AT3G49340,AT1G25155,AT1G14360,AT2G04040,AT3G19510,AT4G04510,AT1G72280,AT3G54960,AT4G10955,AT3G55950,AT3G10500,AT1G21750,AT2G26660,AT4G15610,AT1G12290,AT3G50550,AT4G39270,AT3G11010,AT3G26670,AT5G58940,AT1G52200,AT2G29110,AT1G60610,AT5G61520,AT3G09010,AT4G16660,AT2G29990,AT5G59780,AT1G08450,AT2G32920,AT4G05390,AT4G19670,AT2G40330,AT3G54640,AT5G08240,AT1G70690,AT5G47370,AT3G28930,AT5G24530,AT1G32900,AT1G53645,AT2G46620,AT2G47470,AT3G52430,AT5G53870,AT1G72060,AT1G13470,AT1G62840,AT2G24180,AT5G10380,AT1G56340,AT5G07340,AT3G01830,AT3G57240,AT1G04770,AT2G25110,AT1G33390,AT5G47580,AT1G06760,AT4G17720,AT5G42150,AT5G61160,AT4G27830,AT1G29310,AT1G10410,AT1G28050,AT3G59660,AT1G64710,AT4G13810,AT4G19810,AT5G12930,AT5G66640,AT4G10590,AT1G06000,AT4G21990,AT5G45800,AT5G62620,AT1G09210,AT2G04070,AT1G49470,AT3G13380,AT3G06450,AT1G21100,AT1G56350,AT1G12200,AT4G02930,AT5G51830,AT4G25900,AT3G13910,AT1G52880,AT4G20110,AT3G04350,AT5G50460,AT1G48210,AT3G13790,AT5G60900,AT5G05730,AT1G71100,AT5G25260,AT5G44240,AT2G32240,AT5G20410,AT2G30550,AT1G13990,AT5G64770,AT3G09440,AT5G53800,AT5G52630,AT1G09740,AT2G03120,AT4G35180,AT3G26220,AT3G23550,AT2G31390,AT3G63380,AT1G51760,AT3G50910,AT1G67850,AT4G00500,AT5G17990,AT5G19320,AT1G23840,AT3G25020,AT5G52750,AT1G32340,AT1G05570,AT5G18130,AT5G17380,AT1G30420,AT5G56010,AT2G44240,AT1G35710,AT4G04220,AT4G23300,AT3G53810,AT2G17980,AT4G17500,AT5G22300,AT3G19260,AT1G68740,AT3G45620,AT3G23000,AT4G26240,AT1G24140,AT5G61760,AT2G30870,AT1G52600,AT2G40110,AT5G25070,AT3G03470,AT3G06860,AT5G50200,AT1G18480,AT5G54960,AT3G08720,AT5G23410,AT5G14700,AT5G22250,AT2G21650,AT5G08380,AT1G69870,AT2G17280,AT5G33290,AT5G03630,AT1G76300,AT1G66920,AT5G58710,AT1G30620,AT4G32940,AT5G19690,AT3G19010,AT4G02380,AT4G34630,AT2G36580,AT4G28450,AT5G19550,AT5G53400,AT4G02570,AT1G53310,AT5G54810,AT4G11840,AT1G11950,AT5G44090,AT5G57220,AT1G01340,AT4G36970,AT4G39260,AT1G18210,AT3G02520,AT5G52450,AT3G24503,AT5G11000,AT2G25650,AT5G56630,AT1G71400,AT1G21830,AT4G27300,AT3G50480,AT3G05830,AT3G28480,AT2G19130,AT4G26910,AT1G08940,AT4G23280,AT1G21400,AT5G52810,AT4G04570,AT5G26920,AT4G31860,AT2G32260,AT5G17060,AT1G03350,AT5G51070,AT3G07800,AT2G39210,AT4G39980,AT4G36920,AT2G26650,AT4G34200,AT4G17940,AT5G19960,AT3G06540,AT5G12890,AT1G65690,AT5G52760,AT3G51160,AT2G20420,AT5G57630,AT3G09020,AT1G67650,AT4G37370,AT2G17040,AT4G34680,AT1G59600,AT1G18570,AT3G50740,AT5G61510,AT5G24110,AT2G17720,AT5G07360,AT5G05110,AT2G27190,AT1G77770,AT4G02410,AT1G61870,AT3G13100,AT2G45910,AT1G62380,AT1G07990,AT3G45860,AT2G02360,AT2G37980,AT4G31500,AT2G20610,AT1G53280,AT3G04120,AT2G47240,AT3G46030,AT1G71170,AT3G21220,AT4G37530,AT2G44430,AT2G47990,AT3G28700,AT5G66760,AT3G57550,AT1G69270,AT1G22180,AT5G60950,AT4G26620,AT5G13370,AT2G05540,AT5G55600,AT3G09390,AT5G50840,AT4G08960,AT5G23850,AT3G03520,AT2G39400,AT1G09780,AT4G28460,AT3G27080,AT3G08640,AT5G50780,AT2G43080,AT5G51770,AT2G05630,AT3G27570,AT2G32250,AT5G11670,AT3G52570,AT4G35770,AT2G36530,AT5G10290,AT3G04580,AT1G69720,AT1G01140,AT1G59960,AT1G61560,AT1G71130,AT5G47120,AT1G56220,AT3G17240,AT5G13490,AT1G61640,AT4G15530,AT3G03610,AT5G07830,AT4G24330,AT5G12170,AT2G45510,AT1G08570,AT1G64610,AT5G52390,AT5G05320,AT2G05710,AT3G46440,AT1G51350,AT3G04420,AT4G38260,AT1G78510,AT1G77000,AT2G05050,AT1G67360,AT1G22890,AT5G62900,AT2G35940,AT1G79940,AT5G54490,AT4G26060,AT1G20300,AT1G16970,AT3G51440,AT1G56150,AT5G26600,AT4G01610,AT4G08390,AT5G63930,AT2G40140,AT1G64810,AT2G23890,AT3G20720,AT4G17420,AT4G29040,AT3G46320,AT1G18890,AT5G60790,AT4G36140,AT2G24200,AT2G32950,AT2G17530,AT1G77420,AT1G29720,AT5G45260,AT5G38830,AT5G25930,AT1G03550,AT1G07670,AT1G80460,AT5G15650,AT5G04930,AT4G21660,AT2G35660,AT1G52760,AT2G29400,AT5G15640,AT3G60420,AT2G31060,AT5G54500,AT4G21580,AT1G60420,AT1G22410,AT2G30350,AT5G43710,AT4G24690,AT5G46680,AT3G62150,AT1G77370,AT5G14040,AT4G08850,AT5G09850,AT2G17570,AT4G16430,AT1G13750,AT2G18330,AT4G00040,AT5G45010,AT3G15090,AT5G43910,AT4G01560,AT2G37250,AT4G14420,AT1G34750,AT1G60490,AT1G21370,AT3G54130,AT2G25670,AT3G21520,AT1G71840,AT4G23470,AT5G03290,AT5G47420,AT3G08590,AT3G50920,AT2G24390,AT5G53000,AT5G39040,AT2G34250,AT3G60190,AT5G14030,AT4G07950,AT4G33050,AT5G60460,AT3G18930,AT3G57090,AT1G14020,AT3G15460,AT1G43890,AT4G02220,AT1G43910,AT1G49820,AT3G14620,AT1G25520,AT1G30400,AT4G11830,AT2G11520,AT4G25720,AT5G60280,AT5G61960,AT5G15870,AT5G16880,AT4G08320,AT3G16430,AT2G33120,AT1G03210,AT3G04080,AT3G51430,AT2G45070,AT1G59970,AT3G05970,AT5G61930,AT1G71780,AT1G05180,AT1G06530,AT1G68160,AT3G44720,AT3G11660,AT1G28680,AT1G55850,AT3G51130,AT4G35110,AT5G25770,AT1G53780,AT1G06870,AT1G02330,AT2G37130,AT2G26240,AT4G38100,AT2G04520,AT2G04900,AT4G33030,AT3G23600,AT2G16500,AT3G60520,AT4G19010,AT3G05290,AT5G55070,AT1G19730,AT5G62740,AT5G20620,AT1G67800,AT5G56650,AT3G48080,AT1G08880,AT2G15570,AT3G09410,AT4G26970,AT3G53668,AT4G25030,AT3G09970,AT5G01220,AT2G16710,AT1G13110,AT4G35260,AT1G61250,AT4G37120,AT3G51260,AT1G03040,AT1G28490,AT2G33310,AT3G14920,AT4G29130,AT1G32640,AT5G39030,AT2G36460,AT1G24100,AT5G13570,AT1G80440,AT1G55900,AT4G29660,AT3G55510,AT1G48430,AT5G44580,AT3G12740,AT5G16760,AT2G18250,AT2G30640,AT4G14270,AT2G22660,AT2G05380,AT4G11220,AT4G03020,AT4G24740,AT3G29075,AT4G37640,AT4G30960,AT5G67500,AT2G22500,AT1G05010,AT5G61450,AT5G52240,AT5G01820,AT2G17790,AT5G07940,AT1G48850 CHANDRAN_LEAF_PM-ALTERED_5DPI_DN Down-regulated whole leaf genes with PM-altered expression at 5 dpi (Table S2B PubmedID:20018666) AT5G65220,AT4G26300,AT4G17950,AT5G11060,AT3G15900,AT5G40950,AT3G46370,AT5G02230,AT4G33950,AT4G20840,AT1G19050,AT1G31230,AT1G53120,AT1G63800,AT2G17450,AT3G12930,AT3G47650,AT5G09650,AT3G23310,AT4G13770,AT2G24020,AT1G52510,AT1G65490,AT4G39040,AT1G16880,AT1G72810,AT5G58260,AT1G35340,AT2G44870,AT5G59130,ATCG00640,AT1G65330,AT5G04130,AT1G71030,AT5G27560,AT4G34150,AT5G53580,AT3G59000,AT3G06950,AT2G20260,AT4G21860,AT3G51510,AT4G37470,AT5G23330,AT5G26000,AT5G09960,AT3G56650,AT3G07200,AT1G73080,AT3G17210,AT1G03630,ATCG00790,AT3G57530,AT2G22240,AT2G29390,AT1G49930,AT3G27850,AT1G43850,AT2G32090,AT5G08410,AT5G16715,AT2G25200,AT4G11100,AT1G62480,AT2G26900,AT3G20270,AT1G52230,AT4G18370,AT5G11070,AT4G35250,AT1G30120,AT5G37360,AT1G12900,AT1G69550,AT1G60660,AT4G31270,AT3G56940,AT3G20310,AT4G31550,AT5G40500,AT1G16080,AT1G34350,AT1G10740,AT1G11750,AT2G22980,AT1G49430,AT4G36150,AT3G23760,AT1G13280,AT5G62090,AT5G27350,AT5G62460,AT2G29510,AT4G23890,AT5G58900,AT1G50730,AT5G24800,AT3G21650,AT5G57960,AT2G41990,AT5G65390,AT1G54500,AT1G52220,AT2G21385,AT4G24090,AT1G77640,AT1G33040,AT4G30660,AT4G01080,AT4G30620,AT1G28110,AT4G32330,AT1G31330,AT5G23740,AT5G45280,AT5G39360,AT4G19100,AT4G14610,AT1G19650,AT2G42070,AT3G09500,AT3G44630,AT4G27350,AT3G25600,AT2G06210,AT1G17350,AT5G50740,AT4G12110,AT3G48500,AT5G54600,AT1G49750,AT5G28630,AT1G49890,AT4G30650,AT5G42030,AT3G56340,AT5G24570,AT1G10960,AT4G23270,AT4G19985,AT2G21140,AT1G18730,ATCG00810,AT3G02180,AT1G24822,AT2G36430,AT4G17600,AT3G13430,AT4G14870,AT5G17870,AT2G38750,AT1G62250,AT3G61380,AT5G46570,AT1G04250,AT1G07780,AT1G27480,AT5G16650,AT3G52920,AT1G52830,AT1G14580,AT1G24610,AT3G26950,AT5G45310,AT3G56480,AT5G52920,AT4G15800,AT1G71695,AT3G25410,AT3G04210,AT1G11870,ATCG01000,AT5G48220,AT1G68590,AT2G18162,AT4G18060,AT2G36620,AT1G52290,AT1G70090,AT3G56910,AT1G56580,AT5G06320,AT2G20230,AT1G03457,AT1G27400,AT5G08350,AT1G43560,AT2G25790,AT3G02560,AT5G11450,AT2G45340,AT5G56170,AT1G06190,AT5G18760,AT3G21055,AT2G32450,AT4G12690,AT5G42070,AT5G51720,AT1G76020,AT1G36390,AT1G11430,AT3G43800,AT1G06630,AT5G57100,AT3G04940,AT4G25910,AT2G22670,AT4G02200,AT2G29300,AT1G52280,AT5G50900,AT5G12130,AT1G53290,AT4G29750,AT3G57040,AT3G47860,AT1G18870,AT2G47590,AT3G06850,AT3G19720,AT4G04350,AT3G10080,AT4G16442,AT2G31790,AT1G77090,AT3G20680,AT1G51090,AT4G00895,AT2G34640,AT5G24420,AT5G39790,AT3G14110,AT5G02120,AT1G60230,AT1G16130,AT1G50590,AT1G74840,AT5G57345,AT3G06130,AT1G27120,AT3G61550,AT5G42240,AT3G10610,AT1G60160,AT2G18710,AT3G44735,AT3G57700,AT1G01790,AT1G70760,AT4G18220,AT4G34090,AT1G63180,AT4G12970,AT5G17670,AT5G49450,AT1G48240,AT1G28100,AT2G36230,AT4G37250,AT5G42650,AT1G31480,AT5G27710,AT2G01590,AT5G20040,AT1G19835,AT4G18950,AT1G18020,AT5G18410,AT4G24570,AT4G28660,AT2G30500,AT3G61080,AT1G61900,AT2G35040,AT4G37300,AT3G44610,AT4G33110,AT1G01080,AT2G36410,AT5G22740,AT4G20760,AT3G51420,AT5G43750,AT5G63060,AT3G46110,AT2G04845,AT2G17880,AT4G39970,AT2G38140,AT2G40960,AT1G75030,AT3G59310,AT3G52750,AT1G09390,AT1G21880,AT2G30150,AT3G05320,AT5G58120,AT3G51950,AT5G65460,AT2G03420,AT4G32970,AT2G39180,AT1G33810,AT1G74970,AT2G22990,AT3G20230,AT4G33666,AT2G01180,AT4G00430,AT1G59910,AT5G57340,AT2G35860,AT5G23550,AT1G22370,AT1G12500,AT1G35680,AT5G52960,AT2G04530,AT1G11545,AT5G14660,AT4G01900,AT2G38460,AT3G13740,AT4G16146,AT4G02530,AT1G52400,AT1G67910,AT2G16990,AT1G05560,AT1G19960,AT2G43820,AT3G49260,AT2G27040,AT1G76450,AT3G25805,AT5G48790,AT1G48520,AT2G34810,AT3G46630,AT2G17550,AT5G40960,AT5G13510,AT2G26640,AT2G01760,AT1G69523,AT1G44000,AT2G46250,AT5G57170,AT3G47560,AT1G11410,AT4G31800,AT1G22550,AT3G07470,AT4G09650,AT2G39470,AT3G52960,AT1G32990,AT3G56010,AT1G17650,AT5G25190,AT5G63310,AT3G07340,AT1G63470,AT3G23070,AT5G56750,AT5G02710,AT2G32500,AT3G57930,AT1G65230,AT1G72790,AT4G37080,AT2G40540,AT1G12845,AT2G24060,AT5G14320,AT5G02940,AT2G27130,AT3G10940,AT1G70740,AT2G35710,AT4G01070,AT3G06070,AT5G62840,AT2G05940,AT1G27030,AT2G33990,AT5G52440,AT4G15690,AT4G15630,AT2G37585,AT4G12030,AT4G22200,AT2G06925,AT1G56510,AT4G23940,AT4G18740,AT1G65420,AT5G53490,AT1G21410,AT4G36730,AT1G16410,AT4G09900,AT3G17380,AT5G64310,AT2G29450,AT1G25450,AT5G41800,AT3G07360,AT3G62700,AT2G03240,AT1G18650,AT1G72970,AT5G03760,AT1G20650,AT4G08685,AT2G41640,AT5G64850,AT5G22340,AT3G52870,AT3G28040,AT1G48350,AT3G05800,AT3G28290,AT3G54200,AT1G02816,AT2G20670,AT1G76790,AT1G51080,AT5G48830,AT5G56590,AT1G59840,AT2G24090,AT4G10770,AT5G51460,AT1G50040,AT5G38520,AT5G24010,AT3G52950,AT5G48450,AT5G41760,AT5G41100,AT1G66130,AT4G39710,AT5G39320,AT4G18340,AT3G13672,AT4G17560,AT5G24150,AT4G33080,AT2G33450,AT1G75690,AT4G33660,AT5G55400,AT3G22740,AT4G26670,AT2G05990,AT5G65610,AT3G55840,AT1G75310,AT5G47190,AT4G15920,AT4G16155,AT3G07190,AT4G01250,AT3G62000,AT1G65390,AT5G37770,AT5G22640,AT4G04840,AT1G29070,AT5G53500,AT1G48480,AT3G49680,AT1G14345,AT1G52030,AT5G13240,AT1G70280,AT2G29730,COL2(con,AT5G57700,AT2G44500,AT5G13140,AT1G64355,AT3G45850,AT2G46225,AT1G68410,AT1G75900,AT5G65020,AT1G27950,AT1G13700,AT3G21670,AT4G29780,AT2G35650,AT2G29290,AT1G22330,AT5G55620,AT5G51560,AT4G35470,AT2G21880,AT2G23000,AT1G17970,AT2G45400,AT5G06870,AT5G13400,AT1G27910,AT1G62780,AT5G57550,AT1G31690,AT5G67260,AT5G16590,AT1G26210,AT3G08680,AT3G56880,AT5G54980,AT3G23750,AT2G41330,AT4G18970,AT1G18360,AT4G30470,AT5G42800,AT1G64200,AT5G20270,AT4G39770,AT3G01980,AT1G62560,AT1G56720,AT1G26560,AT4G33420,AT3G50660,AT2G43100,AT2G17230,AT2G29310,AT1G36280,AT1G30520,AT1G62660,AT5G42200,AT5G40380,AT1G07720,AT3G05490,AT4G12980,AT2G19440,AT1G77060,AT1G76600,AT5G12940,AT1G78370,AT1G54820,AT5G45040,AT3G19620,AT3G28200,AT4G20170,AT4G20870,AT1G14230,AT1G13650,AT3G60290,AT1G10550,AT1G49840,AT2G14890,AT1G53520,AT2G34620,AT3G47960,AT1G66100,AT3G12110,AT4G37610,AT2G04780,AT5G44050,AT5G20630,AT2G34930,AT4G01950,AT4G25810,AT5G24030,AT3G23730,AT5G01015,AT4G38400,AT2G43550,AT4G16563,AT1G58270,AT4G17470,AT5G24770,AT5G25930 KURIHARA_AGO1-25_UP Upregulated genes in ago1-25. (Table S2 PubmedID:19633021) AT1G01190,AT1G01580,AT1G02520,AT1G02690,AT1G02920,AT1G02930,AT1G02970,AT1G04020,AT1G04120,AT1G04220,AT1G04770,AT1G06000,AT1G06220,AT1G06560,AT1G06620,AT1G07135,AT1G07220,AT1G07260,AT1G07370,AT1G07390,AT1G08610,AT1G08830,AT1G09090,AT1G09240,AT1G09300,AT1G09830,AT1G10270,AT1G10490,AT1G11130,AT1G11330,AT1G11580,AT1G12010,AT1G12030,AT1G12160,AT1G12200,AT1G12380,AT1G12560,AT1G13260,AT1G13300,AT1G13420,AT1G13520,AT1G13600,AT1G13710,AT1G14170,AT1G14180,AT1G14370,AT1G14790,AT1G15210,AT1G15440,AT1G15480,AT1G15510,AT1G15540,AT1G16110,AT1G16350,AT1G16640,AT1G17020,AT1G17380,AT1G17420,AT1G17590,AT1G17745,AT1G18850,AT1G18880,AT1G18970,AT1G19180,AT1G19250,AT1G19850,AT1G20380,AT1G21250,AT1G21750,AT1G22990,AT1G23090,AT1G24020,AT1G24090,AT1G24280,AT1G24310,AT1G24420,AT1G24530,AT1G25320,AT1G26250,AT1G26380,AT1G26390,AT1G26410,AT1G26420,AT1G26460,AT1G27360,AT1G27370,AT1G27470,AT1G27680,AT1G27730,AT1G27770,AT1G28530,AT1G29320,AT1G29900,AT1G29940,AT1G29980,AT1G30330,AT1G30400,AT1G30700,AT1G30720,AT1G30730,AT1G30760,AT1G30840,AT1G30870,AT1G30900,AT1G31010,AT1G31280,AT1G31290,AT1G31320,AT1G31430,AT1G31690,AT1G31850,AT1G32940,AT1G32960,AT1G33170,AT1G33390,AT1G33410,AT1G33560,AT1G33790,AT1G35720,AT1G36060,AT1G36370,AT1G42440,AT1G43800,AT1G43910,AT1G44830,AT1G44900,AT1G46264,AT1G48370,AT1G48410,AT1G48560,AT1G48930,AT1G49230,AT1G49570,AT1G49760,AT1G50240,AT1G50920,AT1G51380,AT1G51420,AT1G51460,AT1G51790,AT1G51800,AT1G51820,AT1G52250,AT1G52760,AT1G52770,AT1G52790,AT1G52800,AT1G52820,AT1G53310,AT1G53910,AT1G54385,AT1G54540,AT1G54990,AT1G55020,AT1G55120,AT1G55210,AT1G55850,AT1G56010,AT1G56110,AT1G56680,AT1G57820,AT1G58340,AT1G58370,AT1G59740,AT1G59870,AT1G60420,AT1G60730,AT1G60890,AT1G61360,AT1G61380,AT1G62570,AT1G62660,AT1G62670,AT1G62810,AT1G62870,AT1G63160,AT1G63660,AT1G63810,AT1G64160,AT1G64170,AT1G64590,AT1G64790,AT1G66620,AT1G66700,AT1G67180,AT1G67470,AT1G67550,AT1G67630,AT1G67690,AT1G67750,AT1G67810,AT1G67980,AT1G68040,AT1G68450,AT1G68570,AT1G68620,AT1G68850,AT1G68880,AT1G69170,AT1G69730,AT1G69770,AT1G69870,AT1G69880,AT1G70170,AT1G70560,AT1G70710,AT1G71040,AT1G71400,AT1G71870,AT1G72125,AT1G72210,AT1G72360,AT1G72830,AT1G72900,AT1G73260,AT1G73620,AT1G74030,AT1G74360,AT1G74590,AT1G75030,AT1G75040,AT1G75200,AT1G76790,AT1G77050,AT1G77120,AT1G77270,AT1G77380,AT1G77510,AT1G77520,AT1G77530,AT1G77550,AT1G77640,AT1G77690,AT1G77720,AT1G77760,AT1G77990,AT1G78000,AT1G78570,AT1G78780,AT1G78815,AT1G78920,AT1G78930,AT1G78990,AT1G79180,AT1G79360,AT1G79470,AT1G79490,AT1G79530,AT1G79680,AT1G79690,AT1G79940,AT1G80070,AT1G80270,AT1G80320,AT2G01913,AT2G02810,AT2G02930,AT2G02990,AT2G03200,AT2G05120,AT2G05440,AT2G07690,AT2G12646,AT2G15220,AT2G15390,AT2G15480,AT2G16430,AT2G16440,AT2G16660,AT2G16780,AT2G17040,AT2G17280,AT2G18150,AT2G18220,AT2G18900,AT2G18950,AT2G19110,AT2G19490,AT2G19570,AT2G19670,AT2G21790,AT2G21850,AT2G22910,AT2G23150,AT2G23200,AT2G23540,AT2G24180,AT2G24600,AT2G24610,AT2G24850,AT2G25680,AT2G25940,AT2G26440,AT2G26480,AT2G26510,AT2G26560,AT2G26760,AT2G27230,AT2G27660,AT2G28080,AT2G28160,AT2G28190,AT2G28450,AT2G28670,AT2G28960,AT2G29120,AT2G29200,AT2G29350,AT2G29500,AT2G29630,AT2G29710,AT2G29740,AT2G29750,AT2G30210,AT2G30750,AT2G31020,AT2G31880,AT2G32270,AT2G33210,AT2G33380,AT2G33770,AT2G34020,AT2G34260,AT2G34357,AT2G34810,AT2G35980,AT2G36100,AT2G36380,AT2G36570,AT2G36580,AT2G36790,AT2G36880,AT2G36885,AT2G36985,AT2G37230,AT2G37690,AT2G37770,AT2G38280,AT2G38290,AT2G38380,AT2G38390,AT2G38470,AT2G38860,AT2G39030,AT2G39200,AT2G39210,AT2G39220,AT2G39330,AT2G39350,AT2G39510,AT2G39660,AT2G39700,AT2G39710,AT2G40140,AT2G40370,AT2G40390,AT2G40550,AT2G40750,AT2G41220,AT2G41240,AT2G42060,AT2G42200,AT2G42250,AT2G42350,AT2G43570,AT2G43590,AT2G43610,AT2G43620,AT2G43650,AT2G43780,AT2G44480,AT2G44790,AT2G44830,AT2G45220,AT2G45360,AT2G45440,AT2G46430,AT2G46440,AT2G46620,AT2G46740,AT2G46750,AT2G46890,AT2G47000,AT2G47230,AT2G47240,AT2G47550,AT2G47680,AT2G47800,AT2G47850,AT2G47860,AT2G47990,AT3G01175,AT3G01190,AT3G01345,AT3G01420,AT3G02100,AT3G02230,AT3G02370,AT3G02550,AT3G03060,AT3G03670,AT3G04070,AT3G04530,AT3G04570,AT3G04720,AT3G05120,AT3G05370,AT3G05400,AT3G05690,AT3G05950,AT3G06530,AT3G06810,AT3G06860,AT3G06920,AT3G06930,AT3G07050,AT3G07650,AT3G07720,AT3G07770,AT3G08970,AT3G09020,AT3G09220,AT3G09270,AT3G09440,AT3G09720,AT3G09830,AT3G09940,AT3G10040,AT3G10050,AT3G10500,AT3G10530,AT3G10690,AT3G10930,AT3G11340,AT3G11430,AT3G11580,AT3G11964,AT3G12145,AT3G12270,AT3G12500,AT3G12900,AT3G13150,AT3G13175,AT3G13610,AT3G13760,AT3G13790,AT3G13950,AT3G13960,AT3G14020,AT3G14120,AT3G14620,AT3G14870,AT3G14900,AT3G15010,AT3G15240,AT3G15270,AT3G15590,AT3G16050,AT3G16340,AT3G16460,AT3G16470,AT3G16660,AT3G16670,AT3G17790,AT3G18000,AT3G18080,AT3G18130,AT3G18250,AT3G18600,AT3G19200,AT3G19615,AT3G20010,AT3G21240,AT3G21520,AT3G21540,AT3G21720,AT3G21750,AT3G21770,AT3G22060,AT3G22310,AT3G22330,AT3G22550,AT3G22570,AT3G22640,AT3G22840,AT3G22850,AT3G23150,AT3G23170,AT3G23175,AT3G23190,AT3G23290,AT3G23890,AT3G23990,AT3G24020,AT3G24180,AT3G24240,AT3G24300,AT3G24660,AT3G25100,AT3G25610,AT3G25640,AT3G25760,AT3G25770,AT3G26040,AT3G26200,AT3G26210,AT3G26410,AT3G26782,AT3G27150,AT3G27170,AT3G27220,AT3G27280,AT3G27400,AT3G28500,AT3G28540,AT3G28650,AT3G29410,AT3G29430,AT3G30460,AT3G32980,AT3G42658,AT3G42660,AT3G43670,AT3G44300,AT3G44550,AT3G45130,AT3G45140,AT3G46110,AT3G46280,AT3G46690,AT3G47480,AT3G47720,AT3G47730,AT3G47780,AT3G47950,AT3G48080,AT3G48250,AT3G48350,AT3G48870,AT3G49240,AT3G49320,AT3G50280,AT3G50300,AT3G50470,AT3G50480,AT3G50930,AT3G50950,AT3G51240,AT3G51860,AT3G52140,AT3G52170,AT3G52430,AT3G52970,AT3G53190,AT3G53480,AT3G53510,AT3G54040,AT3G54260,AT3G54420,AT3G55110,AT3G55230,AT3G55340,AT3G55410,AT3G55510,AT3G55970,AT3G55980,AT3G56150,AT3G57010,AT3G57150,AT3G57260,AT3G57330,AT3G57600,AT3G57660,AT3G57700,AT3G57780,AT3G57920,AT3G58570,AT3G58660,AT3G59550,AT3G59670,AT3G59700,AT3G59820,AT3G59890,AT3G60140,AT3G61280,AT3G61670,AT3G61990,AT3G63010,AT3G63110,AT3G63380,AT4G00700,AT4G00900,AT4G01525,AT4G01700,AT4G01870,AT4G02060,AT4G02090,AT4G02110,AT4G02290,AT4G02330,AT4G02400,AT4G02930,AT4G03210,AT4G04610,AT4G04940,AT4G04990,AT4G05020,AT4G05390,AT4G06744,AT4G08040,AT4G08690,AT4G08770,AT4G08780,AT4G08850,AT4G08870,AT4G09110,AT4G10270,AT4G10500,AT4G10955,AT4G11120,AT4G11320,AT4G11650,AT4G11850,AT4G12290,AT4G12420,AT4G12490,AT4G12750,AT4G13395,AT4G13510,AT4G13580,AT4G14200,AT4G14365,AT4G14400,AT4G14465,AT4G14630,AT4G14690,AT4G14790,AT4G14980,AT4G15210,AT4G15380,AT4G15390,AT4G15393,AT4G15400,AT4G15440,AT4G15500,AT4G15610,AT4G16260,AT4G16370,AT4G16630,AT4G17090,AT4G17230,AT4G17260,AT4G18250,AT4G18630,AT4G19430,AT4G19810,AT4G19880,AT4G20830,AT4G20860,AT4G21680,AT4G21990,AT4G22120,AT4G22470,AT4G22560,AT4G23600,AT4G23700,AT4G23810,AT4G23990,AT4G24110,AT4G24120,AT4G24190,AT4G25240,AT4G25400,AT4G25630,AT4G25710,AT4G25730,AT4G26010,AT4G26760,AT4G26780,AT4G27560,AT4G27730,AT4G28250,AT4G28900,AT4G28940,AT4G29050,AT4G29080,AT4G29150,AT4G29210,AT4G29270,AT4G29690,AT4G29740,AT4G29780,AT4G30080,AT4G30150,AT4G30170,AT4G30650,AT4G30840,AT4G30991,AT4G31210,AT4G31320,AT4G31330,AT4G31500,AT4G31800,AT4G31940,AT4G31970,AT4G32800,AT4G32810,AT4G33070,AT4G33360,AT4G33495,AT4G33560,AT4G33720,AT4G33790,AT4G34200,AT4G34710,AT4G34860,AT4G35050,AT4G35160,AT4G35380,AT4G35630,AT4G35850,AT4G36150,AT4G36430,AT4G36580,AT4G36640,AT4G36670,AT4G36680,AT4G37190,AT4G37390,AT4G37430,AT4G37640,AT4G37750,AT4G37900,AT4G37910,AT4G37990,AT4G38080,AT4G38540,AT4G38950,AT4G39860,AT4G39950,AT4G39980,AT5G01100,AT5G01250,AT5G01540,AT5G01820,AT5G03350,AT5G03740,AT5G03800,AT5G04340,AT5G04620,AT5G04840,AT5G05600,AT5G05790,AT5G06350,AT5G06510,AT5G06550,AT5G06730,AT5G06740,AT5G06900,AT5G06905,AT5G07030,AT5G07340,AT5G07360,AT5G08020,AT5G08250,AT5G08260,AT5G08380,AT5G08610,AT5G08620,AT5G09420,AT5G09530,AT5G09590,AT5G10625,AT5G10760,AT5G11230,AT5G11240,AT5G11920,AT5G12080,AT5G12220,AT5G12270,AT5G12340,AT5G12420,AT5G12970,AT5G13220,AT5G13320,AT5G13360,AT5G13370,AT5G13520,AT5G13750,AT5G13930,AT5G14050,AT5G14180,AT5G14230,AT5G14610,AT5G14650,AT5G15120,AT5G15980,AT5G16690,AT5G16750,AT5G16930,AT5G17380,AT5G17700,AT5G17860,AT5G18470,AT5G18620,AT5G18820,AT5G19110,AT5G19240,AT5G19440,AT5G19520,AT5G19550,AT5G19890,AT5G20230,AT5G20480,AT5G20630,AT5G20710,AT5G20830,AT5G20960,AT5G21970,AT5G22100,AT5G22630,AT5G22740,AT5G22790,AT5G23190,AT5G23300,AT5G23690,AT5G23940,AT5G23990,AT5G25440,AT5G26220,AT5G26570,AT5G26680,AT5G26710,AT5G26860,AT5G26920,AT5G27420,AT5G35670,AT5G35735,AT5G36220,AT5G37010,AT5G37020,AT5G37600,AT5G38530,AT5G38910,AT5G39020,AT5G39050,AT5G39410,AT5G39670,AT5G39840,AT5G40405,AT5G40480,AT5G40590,AT5G40760,AT5G40780,AT5G41040,AT5G41180,AT5G41761,AT5G42020,AT5G42830,AT5G43270,AT5G43520,AT5G43780,AT5G44380,AT5G44390,AT5G44400,AT5G44480,AT5G44635,AT5G44780,AT5G44920,AT5G45070,AT5G45340,AT5G45380,AT5G45510,AT5G45650,AT5G46050,AT5G46060,AT5G46280,AT5G46740,AT5G47330,AT5G47910,AT5G47980,AT5G48010,AT5G48430,AT5G48850,AT5G49120,AT5G49160,AT5G49520,AT5G50915,AT5G51500,AT5G51660,AT5G51750,AT5G52310,AT5G52450,AT5G53550,AT5G53890,AT5G54020,AT5G54040,AT5G54610,AT5G54960,AT5G55120,AT5G55180,AT5G55450,AT5G55530,AT5G55930,AT5G56000,AT5G56030,AT5G56500,AT5G57090,AT5G57220,AT5G57990,AT5G58520,AT5G58620,AT5G58780,AT5G58860,AT5G59450,AT5G59680,AT5G59820,AT5G61000,AT5G61010,AT5G61790,AT5G62210,AT5G62270,AT5G62520,AT5G63420,AT5G63560,AT5G63600,AT5G63930,AT5G63940,AT5G63960,AT5G64100,AT5G64120,AT5G64420,AT5G64510,AT5G64570,AT5G64630,AT5G65630,AT5G66690,AT5G66750,AT5G66760,AT5G66960,AT5G67100,AT5G67340,AT5G67400 KURIHARA_AGO1-25_DN Downregulated genes in ago1-25. (Table S4 PubmedID:19633021) AT1G01430,AT1G02340,AT1G02660,AT1G03870,AT1G07280,AT1G12990,AT1G13650,AT1G14250,AT1G14280,AT1G14290,AT1G14580,AT1G14700,AT1G17870,AT1G17970,AT1G18620,AT1G18710,AT1G18810,AT1G19350,AT1G20010,AT1G20190,AT1G21670,AT1G22160,AT1G22330,AT1G22370,AT1G22500,AT1G22530,AT1G22690,AT1G22740,AT1G23080,AT1G25230,AT1G26208,AT1G26210,AT1G26920,AT1G26945,AT1G29395,AT1G29420,AT1G29460,AT1G29490,AT1G29660,AT1G34760,AT1G44350,AT1G52000,AT1G52190,AT1G52830,AT1G52870,AT1G53480,AT1G56600,AT1G56720,AT1G57980,AT1G62280,AT1G62510,AT1G64360,AT1G64370,AT1G65310,AT1G65480,AT1G66100,AT1G67900,AT1G69160,AT1G69530,AT1G70260,AT1G72150,AT1G72790,AT1G75960,AT1G77210,AT1G78970,AT2G01420,AT2G05540,AT2G12870,AT2G15020,AT2G18010,AT2G18300,AT2G18890,AT2G20670,AT2G20870,AT2G23760,AT2G26690,AT2G26710,AT2G27500,AT2G27550,AT2G28150,AT2G28200,AT2G29670,AT2G30520,AT2G30600,AT2G30930,AT2G32100,AT2G32860,AT2G32880,AT2G33790,AT2G35060,AT2G36430,AT2G37025,AT2G37030,AT2G37640,AT2G39850,AT2G39980,AT2G40610,AT2G42380,AT2G42620,AT2G42900,AT2G43010,AT2G44740,AT2G46640,AT2G47440,AT2G47880,AT2G47930,AT3G01490,AT3G02170,AT3G03341,AT3G03840,AT3G05170,AT3G05900,AT3G06770,AT3G07010,AT3G11690,AT3G12610,AT3G12710,AT3G13000,AT3G14170,AT3G14440,AT3G15115,AT3G15540,AT3G15570,AT3G16850,AT3G17100,AT3G17510,AT3G20300,AT3G25670,AT3G25717,AT3G28007,AT3G28200,AT3G30180,AT3G42800,AT3G45780,AT3G46490,AT3G47340,AT3G47620,AT3G49790,AT3G50340,AT3G50440,AT3G50750,AT3G50840,AT3G51150,AT3G52840,AT3G53800,AT3G53960,AT3G55560,AT3G55920,AT3G56060,AT3G57400,AT3G57800,AT3G58120,AT3G59350,AT3G59580,AT3G61060,AT3G62070,AT3G62570,AT3G62660,AT4G00950,AT4G01330,AT4G01390,AT4G01950,AT4G03790,AT4G09900,AT4G10150,AT4G11211,AT4G12310,AT4G12690,AT4G12980,AT4G14130,AT4G16515,AT4G16990,AT4G17340,AT4G17460,AT4G17970,AT4G18970,AT4G19170,AT4G19530,AT4G23060,AT4G23400,AT4G24230,AT4G25780,AT4G26150,AT4G26288,AT4G26540,AT4G27410,AT4G28270,AT4G30110,AT4G30340,AT4G30410,AT4G33550,AT4G33625,AT4G34530,AT4G34770,AT4G34790,AT4G35470,AT4G35770,AT4G37080,AT4G37220,AT4G37800,AT4G38690,AT4G38825,AT4G39800,AT5G01075,AT5G01520,AT5G01740,AT5G02160,AT5G02760,AT5G03090,AT5G05690,AT5G06930,AT5G07000,AT5G09220,AT5G11420,AT5G12050,AT5G12950,AT5G13170,AT5G15150,AT5G15410,AT5G17640,AT5G18030,AT5G20270,AT5G22310,AT5G22860,AT5G23210,AT5G24120,AT5G25190,AT5G25460,AT5G35490,AT5G35970,AT5G38510,AT5G39860,AT5G41800,AT5G43440,AT5G45820,AT5G46240,AT5G47370,AT5G47450,AT5G48900,AT5G49215,AT5G49360,AT5G50950,AT5G51810,AT5G52570,AT5G54190,AT5G54510,AT5G57785,AT5G59000,AT5G60850,AT5G60860,AT5G61270,AT5G61290,AT5G62100,AT5G62220,AT5G63850,AT5G64330,AT5G64770,AT5G66400,AT5G66590,AT2G23170 KURIHARA_HYL1-2_UP Upregulated genes in hyl1-2. (Table S3 PubmedID:19633021) AT1G01040,AT1G01300,AT1G01320,AT1G01390,AT1G01420,AT1G01470,AT1G01600,AT1G01640,AT1G01830,AT1G02180,AT1G02220,AT1G02290,AT1G02360,AT1G02460,AT1G02690,AT1G02730,AT1G02850,AT1G02920,AT1G02930,AT1G03080,AT1G03310,AT1G03660,AT1G03780,AT1G03820,AT1G04020,AT1G04070,AT1G04110,AT1G04120,AT1G04220,AT1G04410,AT1G04570,AT1G04620,AT1G04770,AT1G04820,AT1G04840,AT1G04850,AT1G04870,AT1G04945,AT1G04980,AT1G04990,AT1G05055,AT1G05160,AT1G05180,AT1G05300,AT1G05310,AT1G05440,AT1G05560,AT1G05570,AT1G05960,AT1G06000,AT1G06145,AT1G06180,AT1G06270,AT1G06350,AT1G06460,AT1G06550,AT1G06580,AT1G06590,AT1G06620,AT1G06720,AT1G06900,AT1G06950,AT1G07000,AT1G07030,AT1G07050,AT1G07090,AT1G07135,AT1G07260,AT1G07370,AT1G07640,AT1G07670,AT1G07890,AT1G08030,AT1G08050,AT1G08220,AT1G08230,AT1G08250,AT1G08350,AT1G08470,AT1G08560,AT1G08610,AT1G08650,AT1G08800,AT1G08830,AT1G08940,AT1G09020,AT1G09100,AT1G09190,AT1G09200,AT1G09210,AT1G09240,AT1G09470,AT1G09630,AT1G09780,AT1G09810,AT1G09820,AT1G09830,AT1G10090,AT1G10200,AT1G10280,AT1G10310,AT1G10410,AT1G10580,AT1G10585,AT1G10640,AT1G10650,AT1G10760,AT1G10780,AT1G10930,AT1G10970,AT1G11210,AT1G11390,AT1G11670,AT1G11755,AT1G11940,AT1G12010,AT1G12200,AT1G12290,AT1G12380,AT1G12430,AT1G12570,AT1G12620,AT1G12710,AT1G12775,AT1G13020,AT1G13030,AT1G13120,AT1G13160,AT1G13170,AT1G13210,AT1G13270,AT1G13410,AT1G13520,AT1G13600,AT1G13710,AT1G13750,AT1G13860,AT1G13930,AT1G14010,AT1G14120,AT1G14130,AT1G14170,AT1G14210,AT1G14360,AT1G14540,AT1G14770,AT1G14780,AT1G14790,AT1G14820,AT1G14990,AT1G15125,AT1G15140,AT1G15210,AT1G15440,AT1G15510,AT1G15540,AT1G15710,AT1G16010,AT1G16070,AT1G16280,AT1G16340,AT1G16410,AT1G16630,AT1G16780,AT1G16870,AT1G16900,AT1G16970,AT1G17020,AT1G17100,AT1G17110,AT1G17140,AT1G17147,AT1G17170,AT1G17250,AT1G17380,AT1G17420,AT1G17480,AT1G17560,AT1G17590,AT1G17665,AT1G17710,AT1G17745,AT1G17830,AT1G17890,AT1G18040,AT1G18070,AT1G18140,AT1G18150,AT1G18200,AT1G18210,AT1G18250,AT1G18370,AT1G18590,AT1G18720,AT1G18850,AT1G18970,AT1G19130,AT1G19180,AT1G19200,AT1G19250,AT1G19370,AT1G19570,AT1G19670,AT1G19860,AT1G19900,AT1G19920,AT1G20030,AT1G20070,AT1G20370,AT1G20410,AT1G20430,AT1G20510,AT1G20620,AT1G20840,AT1G20870,AT1G20930,AT1G20960,AT1G21250,AT1G21260,AT1G21390,AT1G21440,AT1G21460,AT1G21550,AT1G21560,AT1G21590,AT1G21600,AT1G21650,AT1G21680,AT1G21750,AT1G22180,AT1G22200,AT1G22770,AT1G22950,AT1G22970,AT1G23140,AT1G23205,AT1G23790,AT1G23800,AT1G23830,AT1G23890,AT1G24020,AT1G24070,AT1G24100,AT1G24260,AT1G24310,AT1G24420,AT1G24530,AT1G25220,AT1G25450,AT1G25500,AT1G26190,AT1G26230,AT1G26250,AT1G26370,AT1G26380,AT1G26390,AT1G26410,AT1G26420,AT1G26450,AT1G26520,AT1G26640,AT1G26665,AT1G26690,AT1G26740,AT1G26760,AT1G26770,AT1G26900,AT1G27020,AT1G27340,AT1G27360,AT1G27370,AT1G27390,AT1G27470,AT1G27480,AT1G27630,AT1G27680,AT1G27730,AT1G27900,AT1G28050,AT1G28110,AT1G28140,AT1G28230,AT1G28370,AT1G28390,AT1G28400,AT1G28530,AT1G28570,AT1G28580,AT1G28600,AT1G28610,AT1G28660,AT1G29030,AT1G29170,AT1G29195,AT1G29240,AT1G29370,AT1G29395,AT1G29940,AT1G29980,AT1G30070,AT1G30210,AT1G30330,AT1G30490,AT1G30530,AT1G30580,AT1G30600,AT1G30700,AT1G31010,AT1G31230,AT1G31280,AT1G31430,AT1G31470,AT1G31500,AT1G31550,AT1G31660,AT1G31690,AT1G31817,AT1G31830,AT1G31835,AT1G31850,AT1G32090,AT1G32260,AT1G32330,AT1G32640,AT1G32860,AT1G32940,AT1G33265,AT1G33390,AT1G33410,AT1G33420,AT1G33590,AT1G33600,AT1G33970,AT1G34245,AT1G34380,AT1G34550,AT1G34750,AT1G35260,AT1G35320,AT1G35720,AT1G35780,AT1G42410,AT1G42440,AT1G43620,AT1G43710,AT1G43860,AT1G43910,AT1G44100,AT1G44110,AT1G44170,AT1G44800,AT1G44900,AT1G45010,AT1G45160,AT1G45249,AT1G46480,AT1G47260,AT1G47340,AT1G47420,AT1G47710,AT1G47840,AT1G47900,AT1G48110,AT1G48120,AT1G48210,AT1G48330,AT1G48370,AT1G48570,AT1G48605,AT1G48630,AT1G48650,AT1G48830,AT1G48920,AT1G49160,AT1G49230,AT1G49470,AT1G49540,AT1G49620,AT1G49650,AT1G49670,AT1G49720,AT1G50110,AT1G50420,AT1G50480,AT1G50490,AT1G51090,AT1G51420,AT1G51460,AT1G51560,AT1G51590,AT1G51630,AT1G51790,AT1G51800,AT1G51805,AT1G51820,AT1G51840,AT1G51850,AT1G51890,AT1G51965,AT1G51980,AT1G52000,AT1G52030,AT1G52040,AT1G52050,AT1G52150,AT1G52160,AT1G52250,AT1G52270,AT1G52400,AT1G52410,AT1G52710,AT1G52770,AT1G52790,AT1G52800,AT1G52820,AT1G52890,AT1G53035,AT1G53040,AT1G53070,AT1G53140,AT1G53230,AT1G53240,AT1G53310,AT1G53390,AT1G53510,AT1G53785,AT1G53910,AT1G54000,AT1G54010,AT1G54020,AT1G54080,AT1G54160,AT1G54217,AT1G54220,AT1G54380,AT1G54385,AT1G54460,AT1G54570,AT1G55020,AT1G55120,AT1G55210,AT1G55490,AT1G55690,AT1G55760,AT1G55850,AT1G55920,AT1G56010,AT1G56110,AT1G56300,AT1G56440,AT1G56580,AT1G57610,AT1G57820,AT1G58350,AT1G59720,AT1G59760,AT1G59870,AT1G59960,AT1G59990,AT1G60000,AT1G60070,AT1G60110,AT1G60390,AT1G60590,AT1G60600,AT1G60610,AT1G60640,AT1G60680,AT1G60730,AT1G60770,AT1G60850,AT1G60890,AT1G60960,AT1G61340,AT1G61360,AT1G61380,AT1G61500,AT1G61560,AT1G61580,AT1G61640,AT1G61730,AT1G61800,AT1G61870,AT1G62050,AT1G62085,AT1G62110,AT1G62180,AT1G62200,AT1G62262,AT1G62290,AT1G62300,AT1G62305,AT1G62370,AT1G62560,AT1G62570,AT1G62670,AT1G62730,AT1G62810,AT1G62830,AT1G62870,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AT3G52180,AT3G52190,AT3G52450,AT3G52640,AT3G52740,AT3G52870,AT3G52880,AT3G52910,AT3G52930,AT3G52990,AT3G53160,AT3G53190,AT3G53380,AT3G53430,AT3G53460,AT3G53510,AT3G53530,AT3G53560,AT3G53760,AT3G54040,AT3G54150,AT3G54260,AT3G54400,AT3G54420,AT3G54470,AT3G54600,AT3G54630,AT3G54640,AT3G54750,AT3G54760,AT3G54950,AT3G54960,AT3G55060,AT3G55110,AT3G55120,AT3G55130,AT3G55320,AT3G55340,AT3G55360,AT3G55450,AT3G55660,AT3G55970,AT3G56070,AT3G56090,AT3G56100,AT3G56260,AT3G56330,AT3G56370,AT3G56430,AT3G56710,AT3G56950,AT3G56990,AT3G57010,AT3G57060,AT3G57150,AT3G57230,AT3G57350,AT3G57430,AT3G57470,AT3G57490,AT3G57520,AT3G57600,AT3G57630,AT3G57710,AT3G57780,AT3G57920,AT3G58100,AT3G58220,AT3G58520,AT3G58570,AT3G58650,AT3G58660,AT3G58840,AT3G58990,AT3G59050,AT3G59140,AT3G59210,AT3G59570,AT3G59630,AT3G59660,AT3G59760,AT3G59820,AT3G59890,AT3G60380,AT3G60420,AT3G60510,AT3G60630,AT3G60840,AT3G60900,AT3G61360,AT3G61530,AT3G61650,AT3G61780,AT3G61820,AT3G61960,AT3G62110,AT3G62200,AT3G62360,AT3G62460,AT3G62580,AT3G62700,AT3G62780,AT3G63110,AT3G63160,AT3G63380,AT3G63460,AT3G66658,AT4G00026,AT4G00165,AT4G00270,AT4G00370,AT4G00550,AT4G00620,AT4G00630,AT4G00740,AT4G00790,AT4G00900,AT4G01037,AT4G01070,AT4G01080,AT4G01130,AT4G01430,AT4G01550,AT4G01560,AT4G01700,AT4G01810,AT4G01870,AT4G01920,AT4G01990,AT4G02150,AT4G02330,AT4G02410,AT4G02520,AT4G02680,AT4G02710,AT4G02750,AT4G02800,AT4G02930,AT4G02980,AT4G02990,AT4G03020,AT4G03060,AT4G03960,AT4G04330,AT4G04610,AT4G04770,AT4G04870,AT4G04890,AT4G04910,AT4G04940,AT4G05020,AT4G05120,AT4G05190,AT4G05390,AT4G05410,AT4G05440,AT4G05520,AT4G06599,AT4G06744,AT4G06746,AT4G07400,AT4G07410,AT4G08150,AT4G08470,AT4G08590,AT4G08690,AT4G08770,AT4G08780,AT4G08850,AT4G08870,AT4G08940,AT4G09020,AT4G09110,AT4G09140,AT4G09420,AT4G09500,AT4G09510,AT4G09520,AT4G10480,AT4G10500,AT4G10630,AT4G10955,AT4G10960,AT4G11010,AT4G11080,AT4G11120,AT4G11280,AT4G11290,AT4G11420,AT4G11560,AT4G11600,AT4G11650,AT4G11670,AT4G11800,AT4G11850,AT4G12010,AT4G12030,AT4G12130,AT4G12290,AT4G12310,AT4G12320,AT4G12470,AT4G12480,AT4G12490,AT4G12500,AT4G12620,AT4G12700,AT4G12750,AT4G12900,AT4G12910,AT4G12917,AT4G13070,AT4G13100,AT4G13180,AT4G13195,AT4G13250,AT4G13370,AT4G13395,AT4G13630,AT4G13770,AT4G13810,AT4G13840,AT4G13920,AT4G13930,AT4G13970,AT4G13990,AT4G14040,AT4G14060,AT4G14200,AT4G14230,AT4G14240,AT4G14290,AT4G14310,AT4G14365,AT4G14440,AT4G14480,AT4G14510,AT4G14630,AT4G14660,AT4G14880,AT4G15080,AT4G15210,AT4G15270,AT4G15390,AT4G15400,AT4G15440,AT4G15490,AT4G15500,AT4G15610,AT4G15640,AT4G15740,AT4G15830,AT4G16146,AT4G16250,AT4G16260,AT4G16340,AT4G16370,AT4G16444,AT4G16630,AT4G16670,AT4G16740,AT4G16770,AT4G16860,AT4G16880,AT4G17000,AT4G17020,AT4G17070,AT4G17090,AT4G17140,AT4G17240,AT4G17430,AT4G17470,AT4G17490,AT4G17550,AT4G17570,AT4G17720,AT4G17905,AT4G18020,AT4G18030,AT4G18040,AT4G18130,AT4G18240,AT4G18250,AT4G18270,AT4G18360,AT4G18390,AT4G18430,AT4G18440,AT4G18520,AT4G18630,AT4G18800,AT4G18840,AT4G18880,AT4G19040,AT4G19070,AT4G19110,AT4G19120,AT4G19390,AT4G19410,AT4G19430,AT4G19700,AT4G19810,AT4G19880,AT4G19900,AT4G19985,AT4G20020,AT4G20430,AT4G20440,AT4G21100,AT4G21140,AT4G21170,AT4G21270,AT4G21310,AT4G21380,AT4G21410,AT4G21570,AT4G21650,AT4G21680,AT4G21705,AT4G21770,AT4G21903,AT4G21910,AT4G21990,AT4G22120,AT4G22130,AT4G22150,AT4G22250,AT4G22470,AT4G22520,AT4G22530,AT4G22560,AT4G22590,AT4G22770,AT4G22790,AT4G22980,AT4G23000,AT4G23010,AT4G23020,AT4G23100,AT4G23170,AT4G23250,AT4G23260,AT4G23450,AT4G23490,AT4G23540,AT4G23600,AT4G23620,AT4G23640,AT4G23700,AT4G23770,AT4G23800,AT4G23810,AT4G23990,AT4G24000,AT4G24010,AT4G24110,AT4G24120,AT4G24190,AT4G24265,AT4G24270,AT4G24330,AT4G24350,AT4G24780,AT4G24830,AT4G25020,AT4G25340,AT4G25440,AT4G25470,AT4G25480,AT4G25630,AT4G25640,AT4G25710,AT4G25730,AT4G25750,AT4G25900,AT4G26080,AT4G26270,AT4G26370,AT4G26500,AT4G26600,AT4G26670,AT4G26760,AT4G26780,AT4G26850,AT4G26910,AT4G26940,AT4G26960,AT4G27080,AT4G27130,AT4G27300,AT4G27340,AT4G27510,AT4G27560,AT4G27570,AT4G27585,AT4G27660,AT4G27820,AT4G27860,AT4G27950,AT4G27970,AT4G28200,AT4G28230,AT4G28250,AT4G28310,AT4G28320,AT4G28430,AT4G28450,AT4G28590,AT4G28910,AT4G29010,AT4G29050,AT4G29080,AT4G29110,AT4G29130,AT4G29220,AT4G29520,AT4G29570,AT4G29610,AT4G29680,AT4G29690,AT4G29700,AT4G29730,AT4G29840,AT4G30080,AT4G30140,AT4G30190,AT4G30250,AT4G30360,AT4G30560,AT4G30650,AT4G30660,AT4G30720,AT4G30840,AT4G30890,AT4G30935,AT4G30975,AT4G31210,AT4G31320,AT4G31330,AT4G31500,AT4G31550,AT4G31600,AT4G31810,AT4G31840,AT4G31920,AT4G31970,AT4G31990,AT4G32070,AT4G32340,AT4G32470,AT4G32530,AT4G32605,AT4G32650,AT4G32920,AT4G32980,AT4G33030,AT4G33050,AT4G33090,AT4G33260,AT4G33270,AT4G33360,AT4G33400,AT4G33490,AT4G33495,AT4G33700,AT4G33720,AT4G33780,AT4G33980,AT4G33985,AT4G33990,AT4G34135,AT4G34200,AT4G34560,AT4G34570,AT4G34710,AT4G34740,AT4G34830,AT4G34950,AT4G34980,AT4G35050,AT4G35130,AT4G35160,AT4G35260,AT4G35270,AT4G35300,AT4G35440,AT4G35630,AT4G35760,AT4G35790,AT4G35830,AT4G36010,AT4G36180,AT4G36240,AT4G36360,AT4G36380,AT4G36430,AT4G36440,AT4G36550,AT4G36580,AT4G36620,AT4G36630,AT4G36640,AT4G36670,AT4G36680,AT4G36880,AT4G36910,AT4G37070,AT4G37100,AT4G37110,AT4G37170,AT4G37320,AT4G37370,AT4G37430,AT4G37490,AT4G37640,AT4G37740,AT4G37870,AT4G37900,AT4G37910,AT4G38050,AT4G38100,AT4G38150,AT4G38210,AT4G38350,AT4G38370,AT4G38540,AT4G38550,AT4G38620,AT4G38710,AT4G38890,AT4G38950,AT4G39010,AT4G39230,AT4G39260,AT4G39330,AT4G39470,AT4G39730,AT4G39780,AT4G39950,AT4G39980,AT4G40000,AT4G40065,AT5G01100,AT5G01250,AT5G01420,AT5G01500,AT5G01540,AT5G01790,AT5G02050,AT5G02190,AT5G02270,AT5G02410,AT5G02430,AT5G02490,AT5G02830,AT5G02860,AT5G02890,AT5G02940,AT5G03200,AT5G03240,AT5G03350,AT5G03370,AT5G03390,AT5G03630,AT5G03730,AT5G03800,AT5G03870,AT5G04340,AT5G04360,AT5G04610,AT5G04670,AT5G04740,AT5G04885,AT5G04920,AT5G04950,AT5G05000,AT5G05160,AT5G05240,AT5G05340,AT5G05410,AT5G05510,AT5G05600,AT5G05730,AT5G05740,AT5G05790,AT5G05920,AT5G05990,AT5G06100,AT5G06150,AT5G06250,AT5G06350,AT5G06510,AT5G06550,AT5G06720,AT5G06730,AT5G06900,AT5G06905,AT5G06940,AT5G07030,AT5G07180,AT5G07350,AT5G07360,AT5G07460,AT5G07970,AT5G08000,AT5G08020,AT5G08260,AT5G08370,AT5G08380,AT5G08400,AT5G08570,AT5G08610,AT5G08710,AT5G08790,AT5G09300,AT5G09460,AT5G09590,AT5G09630,AT5G09800,AT5G10110,AT5G10170,AT5G10290,AT5G10390,AT5G10740,AT5G10820,AT5G10930,AT5G11150,AT5G11240,AT5G11300,AT5G11320,AT5G11460,AT5G11510,AT5G11520,AT5G11560,AT5G11670,AT5G12010,AT5G12020,AT5G12080,AT5G12170,AT5G12200,AT5G12340,AT5G12420,AT5G12890,AT5G12930,AT5G13060,AT5G13220,AT5G13300,AT5G13320,AT5G13330,AT5G13420,AT5G13430,AT5G13450,AT5G13480,AT5G13520,AT5G13750,AT5G13840,AT5G14040,AT5G14100,AT5G14180,AT5G14520,AT5G14550,AT5G14580,AT5G14590,AT5G14700,AT5G14940,AT5G15300,AT5G15400,AT5G15490,AT5G15550,AT5G15740,AT5G15770,AT5G15950,AT5G15970,AT5G15980,AT5G16070,AT5G16210,AT5G16250,AT5G16380,AT5G16750,AT5G16950,AT5G16970,AT5G16990,AT5G17000,AT5G17010,AT5G17050,AT5G17160,AT5G17380,AT5G17700,AT5G17760,AT5G17800,AT5G17860,AT5G17930,AT5G18040,AT5G18270,AT5G18470,AT5G18480,AT5G18490,AT5G18525,AT5G18570,AT5G18590,AT5G18620,AT5G18660,AT5G18700,AT5G18840,AT5G18950,AT5G19020,AT5G19320,AT5G19380,AT5G19440,AT5G19750,AT5G19900,AT5G20040,AT5G20150,AT5G20280,AT5G20480,AT5G20550,AT5G20630,AT5G20660,AT5G20700,AT5G20740,AT5G20790,AT5G20950,AT5G20960,AT5G20980,AT5G20990,AT5G22010,AT5G22060,AT5G22100,AT5G22110,AT5G22130,AT5G22140,AT5G22250,AT5G22460,AT5G22630,AT5G22740,AT5G22790,AT5G22840,AT5G22890,AT5G23190,AT5G23240,AT5G23300,AT5G23310,AT5G23400,AT5G23410,AT5G23575,AT5G23630,AT5G23660,AT5G23810,AT5G23940,AT5G23990,AT5G24090,AT5G24150,AT5G24160,AT5G24470,AT5G24780,AT5G24970,AT5G25040,AT5G25090,AT5G25475,AT5G25770,AT5G25820,AT5G25930,AT5G26220,AT5G26260,AT5G26340,AT5G26360,AT5G26570,AT5G26680,AT5G26880,AT5G26920,AT5G27100,AT5G27110,AT5G27330,AT5G27380,AT5G27395,AT5G27420,AT5G27440,AT5G27930,AT5G28220,AT5G28530,AT5G28540,AT5G33290,AT5G33370,AT5G34940,AT5G35220,AT5G35670,AT5G35700,AT5G35735,AT5G35910,AT5G36120,AT5G36210,AT5G36220,AT5G36880,AT5G36890,AT5G36925,AT5G37010,AT5G37020,AT5G37190,AT5G37300,AT5G37310,AT5G37570,AT5G37600,AT5G37780,AT5G37830,AT5G38000,AT5G38530,AT5G38590,AT5G38720,AT5G38780,AT5G38830,AT5G38890,AT5G38900,AT5G38910,AT5G39050,AT5G39350,AT5G39410,AT5G39520,AT5G39580,AT5G39610,AT5G39670,AT5G39680,AT5G39790,AT5G39840,AT5G39850,AT5G39900,AT5G39940,AT5G39980,AT5G40160,AT5G40170,AT5G40240,AT5G40370,AT5G40405,AT5G40460,AT5G40520,AT5G40780,AT5G40830,AT5G40990,AT5G41050,AT5G41350,AT5G41460,AT5G41670,AT5G41761,AT5G41850,AT5G41870,AT5G42020,AT5G42150,AT5G42370,AT5G42440,AT5G42580,AT5G42650,AT5G42655,AT5G42660,AT5G42830,AT5G42890,AT5G42900,AT5G42920,AT5G42970,AT5G43070,AT5G43170,AT5G43180,AT5G43350,AT5G43380,AT5G43400,AT5G43580,AT5G43740,AT5G43745,AT5G43780,AT5G43790,AT5G43860,AT5G43960,AT5G43980,AT5G44005,AT5G44040,AT5G44100,AT5G44110,AT5G44210,AT5G44370,AT5G44380,AT5G44390,AT5G44400,AT5G44410,AT5G44480,AT5G44610,AT5G44620,AT5G44635,AT5G44730,AT5G44780,AT5G44785,AT5G45070,AT5G45080,AT5G45140,AT5G45275,AT5G45330,AT5G45340,AT5G45380,AT5G45400,AT5G45420,AT5G45470,AT5G45480,AT5G45510,AT5G45650,AT5G45700,AT5G45780,AT5G46050,AT5G46270,AT5G46280,AT5G46350,AT5G46440,AT5G46520,AT5G46580,AT5G46740,AT5G46860,AT5G47160,AT5G47210,AT5G47220,AT5G47230,AT5G47240,AT5G47250,AT5G47330,AT5G47500,AT5G47810,AT5G47880,AT5G47980,AT5G48230,AT5G48250,AT5G48290,AT5G48310,AT5G48430,AT5G48640,AT5G48830,AT5G48840,AT5G48850,AT5G48880,AT5G49030,AT5G49120,AT5G49330,AT5G49480,AT5G49525,AT5G49555,AT5G49560,AT5G49890,AT5G49900,AT5G49950,AT5G50200,AT5G50370,AT5G50410,AT5G51050,AT5G51060,AT5G51190,AT5G51220,AT5G51500,AT5G51570,AT5G51600,AT5G51710,AT5G51750,AT5G51820,AT5G52010,AT5G52070,AT5G52180,AT5G52220,AT5G52310,AT5G52320,AT5G52380,AT5G52390,AT5G52450,AT5G52540,AT5G52780,AT5G52790,AT5G52850,AT5G52860,AT5G52950,AT5G53030,AT5G53048,AT5G53210,AT5G53290,AT5G53420,AT5G53540,AT5G53990,AT5G54020,AT5G54040,AT5G54090,AT5G54470,AT5G54810,AT5G54910,AT5G54930,AT5G54960,AT5G54970,AT5G55180,AT5G55450,AT5G55530,AT5G55560,AT5G55580,AT5G55600,AT5G55920,AT5G55930,AT5G56000,AT5G56010,AT5G56030,AT5G56120,AT5G56250,AT5G56350,AT5G56360,AT5G56380,AT5G56580,AT5G56630,AT5G56740,AT5G57110,AT5G57120,AT5G57220,AT5G57270,AT5G57300,AT5G57410,AT5G57590,AT5G57630,AT5G57840,AT5G57990,AT5G58380,AT5G58390,AT5G58600,AT5G58620,AT5G58730,AT5G58760,AT5G58800,AT5G59130,AT5G59210,AT5G59480,AT5G59530,AT5G59540,AT5G59680,AT5G59720,AT5G59820,AT5G60100,AT5G60210,AT5G60450,AT5G60540,AT5G60640,AT5G60790,AT5G60910,AT5G60930,AT5G60960,AT5G60990,AT5G61000,AT5G61020,AT5G61160,AT5G61370,AT5G61380,AT5G61420,AT5G61430,AT5G61450,AT5G61480,AT5G61520,AT5G61600,AT5G61760,AT5G61790,AT5G61810,AT5G61820,AT5G61960,AT5G62050,AT5G62070,AT5G62150,AT5G62190,AT5G62200,AT5G62210,AT5G62340,AT5G62360,AT5G62370,AT5G62440,AT5G62480,AT5G62530,AT5G62550,AT5G62630,AT5G62680,AT5G62720,AT5G62990,AT5G63090,AT5G63100,AT5G63180,AT5G63220,AT5G63290,AT5G63410,AT5G63420,AT5G63580,AT5G63600,AT5G63650,AT5G63760,AT5G63790,AT5G63890,AT5G63950,AT5G63980,AT5G64100,AT5G64110,AT5G64120,AT5G64250,AT5G64320,AT5G64550,AT5G64560,AT5G64580,AT5G64670,AT5G64860,AT5G65000,AT5G65040,AT5G65280,AT5G65310,AT5G65360,AT5G65420,AT5G65630,AT5G65820,AT5G65860,AT5G66120,AT5G66230,AT5G66310,AT5G66420,AT5G66460,AT5G66470,AT5G66510,AT5G66530,AT5G66680,AT5G66760,AT5G66820,AT5G66860,AT5G67150,AT5G67160,AT5G67240,AT5G67270,AT5G67280,AT5G67460,AT5G67630 KURIHARA_HYL1-2_DN Downregulated genes in hyl1-2. (Table S5 PubmedID:19633021) AT1G01060,AT1G01110,AT1G01180,AT1G01240,AT1G01430,AT1G01448,AT1G01540,AT1G01750,AT1G02340,AT1G02380,AT1G02610,AT1G02620,AT1G02640,AT1G02650,AT1G02660,AT1G02750,AT1G03090,AT1G03270,AT1G03400,AT1G03440,AT1G03457,AT1G03610,AT1G03870,AT1G03970,AT1G04230,AT1G04240,AT1G04250,AT1G04430,AT1G05630,AT1G05840,AT1G05860,AT1G06060,AT1G06080,AT1G06230,AT1G06570,AT1G06630,AT1G07180,AT1G07728,AT1G07985,AT1G09250,AT1G09390,AT1G09460,AT1G09480,AT1G09490,AT1G09500,AT1G09570,AT1G09575,AT1G10020,AT1G10150,AT1G10550,AT1G10610,AT1G10740,AT1G11175,AT1G11260,AT1G11380,AT1G11905,AT1G12240,AT1G12244,AT1G12440,AT1G12450,AT1G12560,AT1G12580,AT1G12780,AT1G12990,AT1G13650,AT1G13700,AT1G13880,AT1G14185,AT1G14250,AT1G14280,AT1G14290,AT1G14490,AT1G14580,AT1G14700,AT1G14920,AT1G15000,AT1G15010,AT1G15410,AT1G15430,AT1G15550,AT1G15740,AT1G15920,AT1G16170,AT1G16250,AT1G16320,AT1G16720,AT1G17040,AT1G17050,AT1G17430,AT1G17620,AT1G17780,AT1G17970,AT1G18030,AT1G18460,AT1G18620,AT1G18710,AT1G18810,AT1G19050,AT1G19110,AT1G19150,AT1G19350,AT1G19400,AT1G19530,AT1G19540,AT1G19770,AT1G20190,AT1G20650,AT1G20780,AT1G21000,AT1G21050,AT1G21400,AT1G21450,AT1G21760,AT1G21910,AT1G21920,AT1G22160,AT1G22190,AT1G22330,AT1G22430,AT1G22470,AT1G22530,AT1G22590,AT1G22610,AT1G22640,AT1G22690,AT1G22740,AT1G22870,AT1G22885,AT1G23030,AT1G23050,AT1G23480,AT1G23870,AT1G23880,AT1G24440,AT1G25230,AT1G26560,AT1G26920,AT1G26945,AT1G26960,AT1G27290,AT1G27460,AT1G29430,AT1G29440,AT1G29450,AT1G29460,AT1G29465,AT1G29490,AT1G29500,AT1G29510,AT1G29660,AT1G29760,AT1G30200,AT1G30570,AT1G30690,AT1G30870,AT1G31300,AT1G31935,AT1G32150,AT1G32170,AT1G32220,AT1G32700,AT1G32900,AT1G33055,AT1G33240,AT1G33340,AT1G34630,AT1G34760,AT1G35140,AT1G35340,AT1G35612,AT1G35670,AT1G41740,AT1G42550,AT1G43700,AT1G45180,AT1G45976,AT1G48840,AT1G49032,AT1G49200,AT1G49490,AT1G49500,AT1G49510,AT1G49780,AT1G49840,AT1G49890,AT1G50040,AT1G50280,AT1G50460,AT1G51140,AT1G51950,AT1G52190,AT1G52290,AT1G52830,AT1G52870,AT1G53163,AT1G53190,AT1G53430,AT1G53480,AT1G53570,AT1G53730,AT1G53830,AT1G54090,AT1G54740,AT1G55960,AT1G56170,AT1G56510,AT1G56600,AT1G56720,AT1G57680,AT1G57943,AT1G57980,AT1G57990,AT1G58180,AT1G58470,AT1G59710,AT1G60140,AT1G61100,AT1G61170,AT1G61350,AT1G61795,AT1G61900,AT1G62280,AT1G62510,AT1G62520,AT1G62960,AT1G62980,AT1G63900,AT1G64065,AT1G64500,AT1G64530,AT1G64640,AT1G64660,AT1G64740,AT1G64770,AT1G64860,AT1G65490,AT1G66090,AT1G66100,AT1G66130,AT1G66150,AT1G66160,AT1G66180,AT1G66230,AT1G66900,AT1G67560,AT1G67840,AT1G67900,AT1G68010,AT1G68020,AT1G68190,AT1G68400,AT1G68440,AT1G68840,AT1G68870,AT1G68920,AT1G69040,AT1G69160,AT1G69490,AT1G69570,AT1G69690,AT1G70060,AT1G70090,AT1G70100,AT1G70290,AT1G70360,AT1G70590,AT1G70700,AT1G70940,AT1G71970,AT1G72060,AT1G72150,AT1G72180,AT1G72200,AT1G72360,AT1G72416,AT1G72430,AT1G72600,AT1G72645,AT1G72650,AT1G72770,AT1G72790,AT1G72820,AT1G73670,AT1G73750,AT1G73830,AT1G73870,AT1G74220,AT1G74450,AT1G74458,AT1G74670,AT1G74840,AT1G74860,AT1G74890,AT1G74910,AT1G75080,AT1G75100,AT1G75490,AT1G75770,AT1G76110,AT1G76410,AT1G76490,AT1G76570,AT1G76800,AT1G76990,AT1G77210,AT1G77290,AT1G77640,AT1G78100,AT1G78110,AT1G78230,AT1G78970,AT1G79660,AT1G79700,AT1G80180,AT1G80420,AT1G80440,AT2G01180,AT2G01190,AT2G01420,AT2G01850,AT2G01860,AT2G01910,AT2G01930,AT2G01940,AT2G02710,AT2G02950,AT2G03640,AT2G03710,AT2G03890,AT2G04550,AT2G04690,AT2G05540,AT2G06025,AT2G06850,AT2G07678,AT2G12870,AT2G12875,AT2G14247,AT2G15080,AT2G15680,AT2G16050,AT2G16280,AT2G16380,AT2G16575,AT2G17230,AT2G17650,AT2G17787,AT2G17880,AT2G18010,AT2G18300,AT2G18560,AT2G18700,AT2G18730,AT2G18860,AT2G18890,AT2G19810,AT2G20180,AT2G20670,AT2G20680,AT2G21890,AT2G22240,AT2G22790,AT2G23000,AT2G23100,AT2G23130,AT2G23320,AT2G23690,AT2G23760,AT2G23810,AT2G24240,AT2G24540,AT2G25080,AT2G25200,AT2G25430,AT2G25770,AT2G25800,AT2G25900,AT2G26110,AT2G26570,AT2G26690,AT2G26710,AT2G26975,AT2G27050,AT2G27080,AT2G27500,AT2G28120,AT2G28150,AT2G28200,AT2G28305,AT2G28930,AT2G29300,AT2G29670,AT2G30010,AT2G30040,AT2G30520,AT2G30530,AT2G30580,AT2G30600,AT2G30930,AT2G31083,AT2G31305,AT2G32090,AT2G32100,AT2G32150,AT2G32440,AT2G32450,AT2G32530,AT2G32540,AT2G32550,AT2G32560,AT2G32710,AT2G32800,AT2G32860,AT2G32880,AT2G32890,AT2G33570,AT2G33700,AT2G33990,AT2G34170,AT2G34510,AT2G34620,AT2G34770,AT2G35060,AT2G35230,AT2G35260,AT2G35650,AT2G35710,AT2G35800,AT2G35880,AT2G36050,AT2G36220,AT2G36305,AT2G36410,AT2G36420,AT2G36430,AT2G36540,AT2G36792,AT2G36895,AT2G37025,AT2G37030,AT2G38120,AT2G38230,AT2G38400,AT2G38480,AT2G38820,AT2G39040,AT2G39100,AT2G39570,AT2G39850,AT2G39870,AT2G39980,AT2G40000,AT2G40420,AT2G40530,AT2G40810,AT2G40880,AT2G40960,AT2G41080,AT2G41100,AT2G41240,AT2G41250,AT2G41330,AT2G41430,AT2G41640,AT2G41880,AT2G41940,AT2G41990,AT2G42040,AT2G42170,AT2G42320,AT2G42380,AT2G42580,AT2G42620,AT2G42750,AT2G42870,AT2G42900,AT2G42975,AT2G43010,AT2G43330,AT2G43340,AT2G43820,AT2G44130,AT2G44230,AT2G44500,AT2G45170,AT2G45530,AT2G45750,AT2G46030,AT2G46220,AT2G46310,AT2G46330,AT2G46640,AT2G46710,AT2G46830,AT2G47060,AT2G47440,AT2G47540,AT2G47880,AT2G47930,AT2G48010,AT2G48020,AT3G01220,AT3G01260,AT3G01400,AT3G01490,AT3G01550,AT3G02130,AT3G02140,AT3G02170,AT3G02290,AT3G02340,AT3G02380,AT3G02480,AT3G02550,AT3G03030,AT3G03341,AT3G03750,AT3G03820,AT3G03830,AT3G03840,AT3G03850,AT3G04000,AT3G04890,AT3G05100,AT3G05200,AT3G05490,AT3G05900,AT3G06070,AT3G06080,AT3G06150,AT3G06210,AT3G06330,AT3G06380,AT3G06750,AT3G06760,AT3G06770,AT3G06780,AT3G06868,AT3G07250,AT3G07350,AT3G07360,AT3G07470,AT3G07500,AT3G07550,AT3G07700,AT3G07790,AT3G07940,AT3G08600,AT3G09030,AT3G09600,AT3G10420,AT3G10572,AT3G10760,AT3G11420,AT3G11690,AT3G11700,AT3G11760,AT3G12020,AT3G12150,AT3G12320,AT3G12630,AT3G12710,AT3G12920,AT3G13000,AT3G13061,AT3G13062,AT3G13065,AT3G13450,AT3G13750,AT3G13980,AT3G14770,AT3G15060,AT3G15450,AT3G15510,AT3G15540,AT3G15770,AT3G15780,AT3G15850,AT3G16240,AT3G16800,AT3G16850,AT3G16857,AT3G17040,AT3G17100,AT3G17470,AT3G17510,AT3G17860,AT3G18170,AT3G18560,AT3G18773,AT3G18980,AT3G19400,AT3G19480,AT3G19540,AT3G19680,AT3G19850,AT3G19860,AT3G20300,AT3G21330,AT3G21360,AT3G21420,AT3G21870,AT3G22420,AT3G22961,AT3G23000,AT3G23030,AT3G23050,AT3G23080,AT3G23480,AT3G23750,AT3G23880,AT3G24070,AT3G24190,AT3G24550,AT3G25670,AT3G25690,AT3G26610,AT3G26640,AT3G27170,AT3G28007,AT3G28160,AT3G28180,AT3G28200,AT3G28270,AT3G29240,AT3G29370,AT3G29670,AT3G30180,AT3G42800,AT3G43230,AT3G43850,AT3G44200,AT3G45710,AT3G45730,AT3G45780,AT3G45970,AT3G46370,AT3G46490,AT3G46600,AT3G47340,AT3G47620,AT3G48360,AT3G48390,AT3G49780,AT3G49790,AT3G49960,AT3G50340,AT3G50560,AT3G50750,AT3G50830,AT3G50840,AT3G51110,AT3G51150,AT3G52340,AT3G52720,AT3G52840,AT3G53030,AT3G53830,AT3G54030,AT3G54500,AT3G54690,AT3G54720,AT3G54810,AT3G54920,AT3G55710,AT3G55840,AT3G56290,AT3G56440,AT3G56970,AT3G57040,AT3G57120,AT3G57390,AT3G57400,AT3G57800,AT3G57810,AT3G58120,AT3G58490,AT3G58530,AT3G58620,AT3G58850,AT3G59060,AT3G59080,AT3G59090,AT3G59110,AT3G59350,AT3G59400,AT3G59940,AT3G60200,AT3G60260,AT3G60290,AT3G60320,AT3G60530,AT3G60590,AT3G60910,AT3G61060,AT3G61210,AT3G61260,AT3G61350,AT3G61430,AT3G61590,AT3G61830,AT3G61890,AT3G61970,AT3G62070,AT3G62570,AT3G62660,AT3G62720,AT3G62950,AT4G00050,AT4G00231,AT4G00355,AT4G00360,AT4G00910,AT4G01330,AT4G01450,AT4G01950,AT4G02440,AT4G02540,AT4G02630,AT4G03110,AT4G04020,AT4G04630,AT4G04840,AT4G05100,AT4G06534,AT4G06536,AT4G08040,AT4G08290,AT4G08920,AT4G08930,AT4G08950,AT4G09160,AT4G09460,AT4G09890,AT4G10150,AT4G10170,AT4G10310,AT4G10330,AT4G10840,AT4G10910,AT4G11211,AT4G11330,AT4G12690,AT4G12830,AT4G12980,AT4G13160,AT4G13340,AT4G13530,AT4G13830,AT4G14130,AT4G14500,AT4G14520,AT4G14550,AT4G14560,AT4G14750,AT4G15430,AT4G15760,AT4G15800,AT4G16480,AT4G16515,AT4G16780,AT4G16990,AT4G17245,AT4G17340,AT4G17350,AT4G17460,AT4G17810,AT4G17900,AT4G18340,AT4G18501,AT4G18510,AT4G18640,AT4G18710,AT4G18740,AT4G18830,AT4G19140,AT4G19160,AT4G19170,AT4G19420,AT4G19530,AT4G20070,AT4G20170,AT4G20240,AT4G20260,AT4G20380,AT4G20820,AT4G21760,AT4G21810,AT4G22360,AT4G22570,AT4G23060,AT4G23400,AT4G23750,AT4G23840,AT4G24020,AT4G24050,AT4G24230,AT4G24275,AT4G24590,AT4G24805,AT4G24972,AT4G25170,AT4G25620,AT4G25780,AT4G25800,AT4G25810,AT4G25820,AT4G25830,AT4G25835,AT4G26150,AT4G26288,AT4G26540,AT4G26610,AT4G26690,AT4G27030,AT4G27260,AT4G27310,AT4G27430,AT4G27435,AT4G27450,AT4G27470,AT4G27740,AT4G27745,AT4G27880,AT4G28180,AT4G28190,AT4G28260,AT4G28270,AT4G28300,AT4G29950,AT4G30110,AT4G30320,AT4G30440,AT4G30510,AT4G30610,AT4G31410,AT4G32030,AT4G32040,AT4G32190,AT4G32280,AT4G32300,AT4G32350,AT4G32480,AT4G32770,AT4G32790,AT4G33420,AT4G33550,AT4G33666,AT4G33940,AT4G34000,AT4G34030,AT4G34150,AT4G34250,AT4G34530,AT4G34540,AT4G34770,AT4G34790,AT4G34970,AT4G35100,AT4G35320,AT4G35470,AT4G35770,AT4G36105,AT4G36110,AT4G36410,AT4G36540,AT4G36730,AT4G36780,AT4G36850,AT4G36870,AT4G36900,AT4G37080,AT4G37220,AT4G37550,AT4G37560,AT4G37610,AT4G37760,AT4G37770,AT4G37790,AT4G37800,AT4G38040,AT4G38400,AT4G38470,AT4G38480,AT4G38670,AT4G38690,AT4G38700,AT4G38825,AT4G38840,AT4G38850,AT4G38860,AT4G38940,AT4G38960,AT4G39400,AT4G39675,AT4G39800,AT4G39990,AT4G40080,AT5G01075,AT5G01520,AT5G01620,AT5G01740,AT5G01810,AT5G01880,AT5G01980,AT5G02010,AT5G02020,AT5G02440,AT5G02540,AT5G02550,AT5G02760,AT5G02840,AT5G02910,AT5G02970,AT5G03120,AT5G03150,AT5G03360,AT5G03470,AT5G03490,AT5G03520,AT5G04040,AT5G04150,AT5G04190,AT5G04490,AT5G04720,AT5G04770,AT5G04960,AT5G05090,AT5G05100,AT5G05140,AT5G05190,AT5G05435,AT5G05440,AT5G05500,AT5G05690,AT5G05710,AT5G05750,AT5G05860,AT5G05870,AT5G05880,AT5G05890,AT5G06530,AT5G06700,AT5G06865,AT5G06930,AT5G06980,AT5G07240,AT5G08139,AT5G08150,AT5G08330,AT5G09220,AT5G09410,AT5G09870,AT5G10040,AT5G10150,AT5G10200,AT5G10570,AT5G10695,AT5G11330,AT5G11420,AT5G11650,AT5G12050,AT5G12260,AT5G13100,AT5G13160,AT5G13170,AT5G13570,AT5G13740,AT5G13770,AT5G13900,AT5G14110,AT5G14120,AT5G15120,AT5G15180,AT5G15310,AT5G15330,AT5G15350,AT5G15440,AT5G15581,AT5G15600,AT5G15710,AT5G15830,AT5G15850,AT5G16000,AT5G16030,AT5G16120,AT5G16410,AT5G16590,AT5G17220,AT5G17300,AT5G17640,AT5G18030,AT5G18080,AT5G18130,AT5G18140,AT5G18170,AT5G18630,AT5G18650,AT5G18670,AT5G18850,AT5G18880,AT5G18930,AT5G19070,AT5G19080,AT5G19120,AT5G19140,AT5G19190,AT5G19200,AT5G19260,AT5G19430,AT5G19530,AT5G20120,AT5G20220,AT5G20250,AT5G21170,AT5G21482,AT5G21930,AT5G21940,AT5G22050,AT5G22390,AT5G22500,AT5G22920,AT5G22940,AT5G23130,AT5G23210,AT5G23380,AT5G23730,AT5G23860,AT5G24010,AT5G24030,AT5G24120,AT5G24210,AT5G24800,AT5G24930,AT5G25140,AT5G25190,AT5G25280,AT5G26200,AT5G26740,AT5G27350,AT5G27360,AT5G27690,AT5G28770,AT5G32450,AT5G35490,AT5G35777,AT5G35940,AT5G35970,AT5G36250,AT5G37540,AT5G37710,AT5G38850,AT5G39660,AT5G39860,AT5G39890,AT5G40380,AT5G40890,AT5G41270,AT5G41800,AT5G42200,AT5G42460,AT5G42750,AT5G42810,AT5G43190,AT5G43700,AT5G43725,AT5G44020,AT5G44050,AT5G44190,AT5G44260,AT5G44680,AT5G45110,AT5G47370,AT5G47390,AT5G47450,AT5G47560,AT5G47640,AT5G47900,AT5G48490,AT5G48545,AT5G48590,AT5G48900,AT5G49215,AT5G49360,AT5G49400,AT5G49450,AT5G49700,AT5G50950,AT5G51150,AT5G51460,AT5G51810,AT5G52100,AT5G52250,AT5G52570,AT5G53360,AT5G53970,AT5G54080,AT5G54145,AT5G54380,AT5G54510,AT5G55700,AT5G55900,AT5G55970,AT5G56100,AT5G56140,AT5G56170,AT5G56340,AT5G56550,AT5G56590,AT5G56750,AT5G56870,AT5G57060,AT5G57340,AT5G57550,AT5G57560,AT5G57565,AT5G57625,AT5G57660,AT5G57785,AT5G57800,AT5G58010,AT5G58120,AT5G58340,AT5G58650,AT5G58770,AT5G59000,AT5G59150,AT5G59430,AT5G59750,AT5G59920,AT5G60190,AT5G60580,AT5G60850,AT5G60860,AT5G61560,AT5G62020,AT5G62100,AT5G62130,AT5G62220,AT5G62280,AT5G62570,AT5G62920,AT5G63160,AT5G63190,AT5G63470,AT5G63850,AT5G64090,AT5G64240,AT5G64260,AT5G64330,AT5G64410,AT5G64520,AT5G64780,AT5G64840,AT5G65380,AT5G65470,AT5G65610,AT5G65730,AT5G65890,AT5G66080,AT5G66110,AT5G66200,AT5G66400,AT5G66580,AT5G66590,AT5G66920,AT5G67190,AT5G67385,AT5G67440 HORIGUCHI_GRA-D-MUTANT_UP Upregulated commonly in the gra-D mutants and located outside of the duplications. (Table S2 PubmedID:19508432) AT1G09350,AT1G12845,AT1G15550,AT1G17190,AT1G18870,AT1G27030,AT1G28230,AT1G35670,AT1G52000,AT1G56650,AT1G68600,AT1G77960,AT1G80130,AT2G34810,AT2G40435,AT3G05640,AT3G11410,AT3G50440,AT3G51450,AT3G53980,AT4G03960,AT4G14020,AT4G23600,AT5G03545,AT5G22460,AT5G25110 HORIGUCHI_GRA-D-MUTANT_DN Downregulated commonly in the gra-D mutants and located outside of the duplications. (Table S3 PubmedID:19508432) AT1G03470,AT1G10522,AT1G14350,AT1G15510,AT1G48570,AT1G56150,AT1G66100,AT1G69200,AT1G75250,AT1G75750,AT1G76240,AT2G04160,AT2G05540,AT2G16660,AT2G22810,AT2G29490,AT2G34640,AT2G43520,AT2G43590,AT3G02480,AT3G05730,AT3G13750,AT3G16670,AT3G20370,AT3G28740,AT3G30180,AT3G51870,AT3G62950,AT4G15690,AT4G15700,AT4G21870,AT4G30140,AT5G01870,AT5G02540,AT5G03130,AT5G08610,AT5G18600,AT5G22300,AT5G24150,AT5G24240,AT5G24420,AT5G36910,AT5G39710,AT5G43500,AT5G45840,AT5G49450,AT5G59330,AT5G59510,AT5G64110 HSIEH_WT-ENDOSPERM/EMBRYO_UP Up-regulated genes with significant (p<1x10-7) methylation changes within 1 Kb in WT endosperm compared to embryo (Table S4 PubmedID:19520962) AT2G23410,AT1G15010,AT5G44870,AT2G05660,AT5G59845,AT3G25260,AT3G27540,AT3G27785,AT5G27600,AT2G41260,AT1G16980,AT3G03470,AT2G31900,AT2G32370,AT1G12040,AT2G25940,AT2G23260,AT4G35725,AT3G48740,AT2G15440,AT1G79330,AT2G21420,AT3G49050,AT2G16990,AT1G32450,AT2G23150,AT4G37050,AT5G07280,AT2G23430,AT3G20950,AT3G54770,AT1G66020,AT5G27910,AT3G29800,AT2G17310,AT4G00220,AT1G02850,AT5G06500,AT3G16450,AT2G24340,AT1G43760,AT5G24030,AT4G05030,AT4G03830,AT1G22590,AT5G11460,AT2G02610,AT5G03020,AT2G33830,AT5G35480,AT5G05260,AT3G28830,AT2G19420,AT3G45810,AT2G11810,AT1G47660,AT5G13820,AT3G59710,AT1G30760,AT4G00440,AT5G33290,AT3G26880,AT3G48450,AT5G04030,AT3G22870,AT5G39560,AT2G03370,AT2G27390,AT3G26390,AT3G51860,AT3G20450,AT1G12100,AT4G35290,AT4G03156,AT5G47070,AT4G02910,AT2G22590,AT4G04620,AT5G03840,AT2G15790,AT3G22860,AT5G28560,AT2G37800,AT2G16980,AT3G20340,AT3G22940,AT3G45480,AT2G40310,AT5G25890,AT3G16600,AT3G45000,AT3G27473,AT5G27350,AT1G12990,AT2G43870,AT3G53350,AT4G20480,AT2G31930,AT3G52370,AT3G50730,AT4G23080,AT2G07290,AT3G26960,AT1G02700,AT2G24360,AT1G49800,AT1G26970,AT2G17740,AT1G05540,AT2G30590,AT1G36920,AT3G15890,AT2G44570,AT5G19630,AT5G40640,AT3G32040,AT5G24316,AT4G32500,AT2G04920,AT3G16530,AT1G15790,AT4G31060,AT3G24510,AT2G32790,AT2G01580,AT3G27980,AT3G15900,AT3G19350,AT4G03160,AT5G48180,AT4G13270,AT1G14580,AT3G57390,AT3G29770,AT5G24850,AT3G28790,AT2G02370,AT3G21800,AT5G25900,AT2G03580,AT4G08290,AT3G26800,AT4G00040,AT1G66110,AT2G01600,AT4G03290,AT1G09370,AT2G26230,AT5G18550,AT3G26490,AT1G28300,AT5G19710,AT2G24040,AT1G78340,AT3G45230,AT3G50060,AT3G14205,AT4G07820,AT2G04870,AT1G18940,AT3G45540,AT1G09970,AT4G09880,AT2G18930,AT2G02180,AT4G05100,AT2G15900,AT5G27000,AT5G07250,AT2G01660,AT5G28470,AT1G28270,AT5G35920,AT5G41350,AT2G37050,AT3G66656,AT3G21700,AT2G13430,AT5G11670,AT2G05755,AT1G49660,AT4G05170,AT5G35550,AT5G35490,AT5G67250,AT2G06200,AT4G04990,AT2G05540,AT2G05920,AT3G30845,AT2G45290,AT5G22300,AT1G29760,AT3G45850,AT3G28520,AT1G27040,AT2G22750,AT1G75370,AT2G26070,AT3G25080,AT1G18870,AT3G30460,AT3G01015,AT2G26480,AT4G10770,AT3G61260,AT5G17060,AT3G21790,AT5G01520,AT2G34890,AT2G19280,AT2G45650,AT3G30160,AT5G26970,AT1G36070,AT2G28900,AT1G33440,AT3G14270,AT4G15400,AT5G24120,AT3G22880,AT4G03080,AT3G50630,AT3G27510,AT1G31960,AT2G30470,AT3G30820,AT4G35720,AT5G39090,AT3G20720,AT5G03090,AT2G44745,AT1G13460,AT3G60840,AT2G02650,AT1G05680,AT5G09340,AT4G24630,AT2G17470,AT1G10690,AT4G04080,AT4G04340,AT3G13900,AT5G25540,AT5G50480,AT1G27680,AT3G46400,AT4G29180,AT3G28580,AT2G28520,AT5G17600,AT5G40830,AT3G54930,AT3G07100,AT1G34440,AT1G65450,AT3G54070,AT3G28155,AT1G43640,AT5G23270,AT2G01300,AT2G16090,AT5G25930,AT4G08470,AT3G45110,AT3G19950,AT2G20805,AT3G22050,AT2G24370,AT3G05010,AT2G13290,AT3G43220,AT1G35500,AT4G10500,AT1G64300,AT5G17320,AT2G05350,AT2G15090,AT3G17120,AT4G08330,AT3G29170,AT2G31050,AT5G11840,AT2G07020,AT4G15120,AT5G09520,AT1G30790,AT4G05060,AT2G21930,AT4G01610,AT3G29690,AT3G27410,AT2G02820,AT1G03350,AT3G28510,AT4G13700,AT2G41440,AT1G02580,AT5G08240,AT1G67450,AT2G45880,AT3G06360,AT2G05160,AT3G09690,AT2G15230,AT2G45780,AT3G44760,AT3G50570,AT1G12520,AT3G14820,AT4G04210,AT1G53160,AT5G28770,AT2G01610,AT2G36190,AT3G48700,AT5G17570,AT3G05000,AT2G28840,AT4G02420,AT5G25880,AT2G42270,AT2G26260,AT2G15890,AT1G68520,AT2G27140,AT3G09520,AT1G06160,AT3G28007,AT2G23240,AT5G22890,AT3G12870,AT5G05760,AT4G32530,AT1G33270,AT2G25310,AT1G72890,AT4G11890,AT3G45460,AT4G10040,AT1G28200,AT3G23490,AT3G56080,AT3G28120,AT5G26740,AT4G07380,AT2G03840,AT3G11320,AT5G48460,AT2G01690,AT5G27150,AT4G08180,AT3G26310,AT2G38670,AT5G48690,AT4G00740,AT3G50210,AT3G20800,AT3G13662,AT3G43300,AT2G23400,AT3G26320,AT4G36460,AT3G27200,AT2G14095,AT1G51200,AT2G01620,AT4G04510,AT5G38710,AT1G02205,AT2G24880,AT2G20010,AT5G37830,AT4G08430,AT2G05590,AT5G09810,AT3G43860,AT2G25910,AT1G25370,AT2G12480,AT2G41730,AT2G06090,AT3G16550,AT1G32410,AT1G18610,AT5G12200,AT3G48530,AT2G04060,AT4G15330,AT3G28890,AT5G37930,AT2G13950,AT1G01180,AT2G16510,AT3G03970,AT2G20670,AT2G16340,AT5G43260,AT1G62310,AT3G29760,AT5G11850,AT1G60985,AT2G01810,AT3G15730,AT5G28220,AT4G09300,AT1G32180,AT1G49950,AT2G26770,AT1G35330,AT1G23780,AT2G17000,AT1G52700,AT2G24860,AT1G23130,AT2G38185,AT5G42660,AT2G01460,AT3G58580,AT4G23920,AT3G23960,AT1G28630,AT1G65680,AT3G21170,AT1G61210,AT3G29260,AT3G55940,AT4G14990,AT3G27530,AT3G27670,AT3G28380,AT3G44400,AT5G40430,AT1G32760,AT2G12400,AT5G17470,AT2G24830,AT2G25110,AT2G18170,AT2G41490,AT1G52560,AT1G30000,AT2G24765,AT2G23420,AT2G01930,AT2G01910,AT5G12260,AT3G26510,AT3G62230,AT3G29670,AT3G48950,AT2G04570,AT2G07360,AT5G04950,AT1G71780,AT2G11000,AT5G24440,AT3G27300,AT3G29400,AT3G23920,AT2G33000,AT3G10300,AT3G25040,AT5G28530,AT5G17310,AT2G04550,AT1G43890,AT4G08040,AT4G04850,AT3G24480,AT2G16960,AT5G26250,AT5G48650,AT3G27880,AT2G25350,AT5G40740,AT5G46350,AT3G07560,AT3G29780,AT1G33230,AT2G35670,AT3G13225,AT2G03050,AT3G44340,AT3G44700,AT5G40360,AT3G14010,AT1G08110,AT3G52700,AT3G19340,AT5G25400,AT2G10950,AT5G47520,AT1G05490,AT1G27990,AT3G28870,AT3G30530,AT1G54100,AT1G34220,AT4G11770,AT1G49560,AT3G45870,AT3G11530,AT2G01480,AT4G10880,AT1G25375,AT3G55670,AT2G17540,AT3G28770,AT4G08320,AT3G43240,AT5G24290,AT5G63540,AT3G19160,AT4G19530,AT2G01410,AT4G21580,AT1G63170,AT2G20620,AT2G19470,AT4G18140,AT2G34080,AT1G45688,AT2G04500,AT1G29970,AT3G29360,AT1G32220,AT4G24980,AT3G46830,AT5G24890,AT4G09690,AT3G22950,AT2G26340,AT2G04620,AT5G19070,AT2G13150,AT5G45620,AT1G32120,AT1G30140,AT2G04220,AT2G02560,AT1G32340,AT4G05330,AT5G05140,AT5G26960,AT3G45190,AT2G22060,AT4G21980,AT4G28950,AT1G27970,AT2G23250,AT5G01160,AT1G34550,AT5G35540,AT3G44730,AT2G02960,AT5G35730,AT1G32000,AT5G33280,AT5G64500,AT1G26580,AT5G42680,AT4G12230,AT4G08960,AT5G48020,AT4G16190,AT2G28380,AT4G01070,AT3G27050,AT1G35670,AT3G25110,AT4G02170,AT3G45300,AT5G41340,AT3G46000,AT3G17210,AT5G12210,AT5G40820,AT2G15535,AT5G11770,AT3G52560,AT4G13360,AT4G26100,AT5G57180,AT1G50060,AT2G42720,AT3G30230,AT2G03980,AT1G43950,AT4G30450,AT2G19790,AT4G09130,AT2G02870,AT3G26950,AT5G51740,AT1G02790,AT1G33250,AT1G14790,AT1G18550,AT2G16365,AT3G57040,AT2G19480,AT1G53000,AT5G63260,AT4G12000,AT1G77710,AT2G21230,AT3G13110,AT2G04750,AT3G51580,AT1G35614,AT5G27280,AT2G14835,AT3G57890,AT4G09460,AT2G01520,AT3G58190,AT1G28460,AT2G04240,AT2G22930,AT1G07025,AT4G17270,AT4G28940,AT1G10390,AT1G48790,AT1G19090,AT5G23000,AT4G08800,AT3G28030,AT3G23310,AT3G24800,AT1G66880,AT3G10370,AT2G23800,AT3G11850,AT2G39770,AT5G25110,AT1G35710,AT3G01420,AT4G11140,AT1G76190,AT1G66750,AT4G07990,AT1G27220,AT4G13730,AT3G14250,AT2G02800,AT2G32700,AT3G47060,AT2G07050,AT3G29430,AT2G06530,AT5G22060,AT2G03430,AT1G47290,AT1G54960,AT3G14030,AT2G07180,AT2G25470,AT3G10940,AT4G01390,AT3G04860,AT3G20920,AT5G47940,AT3G11480,AT3G44800,AT3G58640,AT3G25800,AT3G03370,AT2G17890,AT2G22010,AT4G03580,AT3G24315,AT2G32150,AT2G01270,AT3G16940,AT3G46460,AT1G75990,AT3G27390,AT2G23090,AT3G10540,AT1G34470,AT5G55350,AT3G30200,AT2G25900,AT5G04230,AT3G16460,AT3G21175,AT3G47810,AT3G26590,AT3G49930,AT3G29390,AT2G27180,AT2G05260,AT2G01830,AT4G08920,AT3G22200,AT5G35080,AT5G16200,AT1G05030,AT1G02960,AT3G29140,AT3G30340,AT5G40010,AT5G47900,AT5G42880,AT4G02480,AT3G55260,AT5G07990,AT2G17620,AT3G25220,AT3G25140,AT3G16830,AT3G20015,AT1G65520,AT3G44280,AT2G42880,AT3G17490,AT1G08250,AT4G07740,AT5G05130,AT5G38470,AT2G13760,AT2G12900,AT1G76200,AT2G31510,AT3G51610,AT3G54290,AT5G24655,AT3G23660,AT2G40316,AT4G14430,AT3G48410,AT3G29080,AT4G05190,AT3G48210,AT2G14830,AT3G26400,AT1G19270,AT2G03560,AT1G61340,AT2G21410,AT3G50770,AT2G15260,AT2G01390,AT1G51420,AT2G27300,AT2G38610,AT5G20370,AT5G36290,AT4G24690,AT2G28130,AT3G26110,AT1G50160,AT3G19380,AT4G05370,AT3G29350,AT1G30650,AT5G49940,AT2G01280,AT5G08360,AT4G10060,AT1G35510,AT3G27750,AT1G03150,AT2G28060,AT5G39930,AT3G19420,AT5G35700,AT3G42970,AT5G46210,AT5G05610,AT5G46340,AT5G26010,AT3G26600,AT5G42300,AT2G15660,AT3G22190,AT5G45190,AT4G10100,AT2G24440,AT2G24170,AT2G06210,AT1G50290,AT2G32040,AT2G29750,AT5G32440,AT1G47310,AT5G45200,AT3G06440,AT5G40300,AT3G22810,AT5G22555,AT5G46290,AT3G16920,AT3G17740,AT2G25010,AT2G04690,AT1G15110,AT3G29190,AT3G44940,AT5G28150,AT1G32230,AT2G26600,AT1G71450,AT3G12490,AT3G47740,AT2G40620,AT2G02720,AT3G29570,AT3G43170,AT4G01010,AT1G47885,AT2G19510,AT2G45100,AT3G44110,AT2G16950,AT2G01800,AT3G33530,AT5G37300,AT4G18470,AT3G24050,AT1G65270,AT1G57700,AT5G36260,AT1G32070,AT2G22920,AT1G03560,AT3G24180,AT4G11820,AT3G24350,AT3G12840,AT2G35230,AT3G43230,AT4G02160,AT3G44850,AT2G40420,AT5G04110,AT5G39760,AT4G02500,AT4G07350,AT2G27460,AT1G34760,AT1G05440,AT4G17260,AT1G13180,AT3G29420,AT1G07980,AT5G24360,AT4G00660,AT3G23650,AT1G17000,AT2G16900,AT3G24530,AT2G16520,AT5G37010,AT5G29070,AT4G12890,AT2G28390,AT2G19290,AT1G55700,AT2G16250,AT5G38280,AT4G02920,AT3G20960,AT3G11290,AT3G11540,AT3G05520,AT5G41450,AT1G47380,AT4G26050,AT5G49210,AT1G56450,AT1G67230,AT5G54520,AT3G29100,AT5G06050,AT3G27925,AT3G49340,AT1G05630,AT5G35380,AT5G39990,AT3G13630,AT1G50620,AT4G13520,AT4G34350,AT5G44860,AT3G30320,AT1G52950,AT4G05070,AT1G42700,AT5G40340,AT1G45000,AT3G27590,AT2G37840,AT2G18510,AT3G44050,AT1G18190,AT3G15480,AT1G02220,AT4G01400,AT2G20300,AT5G47890,AT2G18940,AT2G07110,AT2G22990,AT2G24080,AT4G10180,AT5G45600,AT2G13840,AT2G19410,AT3G57090,AT3G20700,AT3G45820,AT5G42220,AT2G01710,AT3G52950,AT2G44230,AT2G38500,AT3G50070,AT5G23840,AT4G24620,AT2G01220,AT4G10140,AT1G13760,AT3G16930,AT5G19020,AT3G22170,AT1G28120,AT1G24620,AT2G34840,AT2G30380,AT2G42890,AT3G09970,AT2G30200,AT4G10050,AT5G24650,AT5G24670,AT1G53885,AT4G08930,AT3G46390,AT3G43900,AT3G10310,AT3G27020,AT1G35617,AT5G04940,AT3G12000,AT3G22231,AT3G01410,AT2G45870,AT2G17750,AT1G28210,AT3G26210,AT5G24240,AT2G40020,AT3G27090,AT2G44560,AT2G01820,AT1G17240,AT2G34690,AT3G22590,AT5G53150,AT2G02580,AT4G17310,AT1G48510,AT5G35100,AT2G03510,AT2G26760,AT5G35620,AT2G27080,AT5G45000,AT2G17920,AT3G27190,AT2G30110,AT3G22425,AT1G36730,AT2G03690,AT5G58350,AT2G24200,AT5G26790,AT5G42190,AT2G03800,AT5G37380,AT2G07690,AT3G29375,AT5G23530,AT3G45160,AT3G08650,AT1G12370,AT1G57650,AT2G07280,AT1G49260,AT1G11370,AT2G30920,AT2G25930,AT3G16540,AT2G06005,AT3G54100,AT2G29050,AT2G25540,AT4G05000,AT3G45990,AT3G28930,AT5G42640,AT4G07515,AT3G46170,AT3G48610,AT2G25920,AT3G45060,AT4G02780,AT1G32430,AT3G27350,AT3G47770,AT3G52740,AT4G24680,AT3G26720,AT1G02450,AT4G05150,AT2G29890,AT3G51100,AT3G49850,AT1G68440,AT2G16710,AT2G31040,AT3G13620,AT3G29270,AT3G07400,AT1G28370,AT5G45610,AT2G03060,AT3G19050,AT3G52730,AT1G08480,AT2G30460,AT4G23070,AT5G26640,AT3G23980,AT2G15020,AT4G08310,AT4G02150,AT2G21920,AT5G63620,AT4G10030,AT1G31440,AT2G39930,AT1G28340,AT3G01320,AT1G73400,AT3G12760,AT1G48010,AT3G03980,AT3G22920,AT3G43110,AT5G48280,AT4G14410,AT5G15570,AT3G57990,AT1G48370,AT3G26790,AT2G03350,AT3G22290,AT2G18610,AT5G19240,AT4G12430,AT1G34310,AT5G22790,AT5G53460,AT3G28680,AT3G52190,AT1G01530,AT3G25580,AT3G54080,AT2G02480,AT5G52920,AT1G31812,AT2G26800,AT2G27510,AT5G41720,AT3G43660,AT5G27610,AT3G27570,AT5G24100,AT3G60130,AT3G27110,AT2G01650,AT2G15270,AT3G54670,AT1G54120,AT1G60950,AT1G35320,AT1G51980,AT3G30220,AT2G21770,AT1G20030,AT5G06800,AT2G16586,AT3G28950,AT2G29740,AT3G46710,AT5G39640,AT5G36080,AT5G35360,AT4G10970,AT2G01530,AT4G36800,AT3G28720,AT2G14170,AT4G04970,AT2G29995,AT1G05610,AT2G16620,AT3G17750,AT2G20810,AT1G43860,AT3G27260,AT1G70170,AT2G14110,AT1G69390,AT2G41480,AT1G32080,AT4G31780,AT5G39080,AT1G68490,AT3G21640,AT2G26590,AT4G03110,AT1G48280,AT1G53035,AT2G26780,AT1G30270,AT3G49350,AT1G47250,AT5G53520,AT5G35580,AT3G50500,AT2G05940,AT1G56680,AT2G22770,AT3G16320,AT2G24762,AT2G16940,AT3G43250,AT2G02730,AT2G30160,AT3G27470,AT5G09730,AT3G27100,AT5G26360,AT2G35460,AT2G05990,AT4G09980,AT3G09310,AT2G04680 HSIEH_WT-ENDOSPERM/EMBRYO_DN Down-regulated genes with significant (p<1x10-7) methylation changes within 1 Kb in WT endosperm compared to embryo (Table S4 PubmedID:19520962) AT5G53800,AT1G05530,AT2G15480,AT5G26780,AT2G32520,AT3G54360,AT5G06170,AT1G22480,AT2G14260,AT3G51620,AT4G03070,AT5G09970,AT3G22960,AT5G08740,AT1G16610,AT1G36970,AT4G11610,AT1G34320,AT4G01100,AT5G35840,AT3G16020,AT3G44330,AT3G52780,AT4G01340,AT3G24060,AT1G50660,AT1G28060,AT4G08170,AT1G44990,AT5G42470,AT3G46180,AT5G49930,AT2G16380,AT2G18040,AT2G04305,AT2G40630,AT4G15930,AT5G15680,AT3G11760,AT2G16070,AT3G44320,AT5G26990,AT1G05430,AT1G64700,AT5G35200,AT1G29990,AT2G16460,AT5G60950,AT3G53900,AT1G55280,AT1G57670,AT3G46690,AT1G53580,AT3G24190,AT2G15320,AT4G12340,AT2G10970,AT1G64920,AT5G48640,AT2G01890,AT5G28550,AT1G70450,AT5G38020,AT1G63200,AT5G62840,AT1G28010,AT4G37020,AT2G02850,AT3G01330,AT3G19520,AT5G43910,AT2G34590,AT3G46860,AT3G53910,AT3G24200,AT5G42230,AT5G01080,AT3G27610,AT2G03870,AT2G19300,AT2G03070,AT4G08620,AT1G67250,AT2G37950,AT4G08500,AT2G04940,AT3G57380,AT2G06010,AT3G27080,AT3G51110,AT3G27330,AT4G00760,AT1G54170,AT4G00130,AT5G23010,AT4G12790,AT3G28190,AT2G15760,AT5G55340,AT2G25970,AT1G21120,AT3G27930,AT2G04230,AT3G29410,AT4G03820,AT3G43840,AT2G40690,AT3G09630,AT3G15250,AT3G13226,AT3G44190,AT2G32730,AT2G33410,AT3G33520,AT5G05030,AT5G58850,AT5G38350,AT5G52510,AT3G28590,AT1G13470,AT2G36700,AT4G39860,AT1G43190,AT5G51930,AT3G28670,AT5G49260,AT3G04090,AT1G69250,AT5G22290,AT3G10680,AT1G66330,AT2G16860,AT5G27200,AT3G28050,AT1G32480,AT1G18660,AT3G28330,AT1G04400,AT2G03470,AT5G57360,AT1G34540,AT4G09680,AT4G02820,AT5G57490,AT3G15260,AT3G02520,AT5G22870,AT1G48420,AT3G27210,AT3G28040,AT5G41440,AT3G45980,AT3G12050,AT3G25480,AT3G13670,AT5G35910,AT5G13470,AT4G03153,AT3G49810,AT4G02770,AT2G07240,AT5G28840,AT3G49060,AT3G28840,AT3G54170,AT2G15500,AT1G44478,AT1G64860,AT3G03380,AT2G01735,AT3G24540,AT4G17870,AT3G60620,AT4G05160,AT2G39330,AT3G60350,AT3G16140,AT1G26240,AT1G02270,AT4G03090,AT5G15790,AT2G02050,AT2G01850,AT4G09340,AT5G27540,AT3G46570,AT5G50770,AT2G35030,AT1G02690,AT1G76860,AT5G04260,AT1G61040,AT2G03180,AT2G01960,AT2G26080,AT1G17490,AT4G14350,AT3G47930,AT5G44710,AT2G18540,AT5G27490,AT3G04400,AT5G23880,AT1G11790,AT2G29920,AT1G44000,AT3G20980,AT4G19680,AT3G17080,AT3G08610,AT1G12730,AT2G42340,AT4G00400,AT5G27710,AT1G15360,AT1G04390,AT5G40100,AT3G49270,AT5G11780,AT3G22160,AT3G32940,AT4G04860,AT1G16650,AT4G12250,AT3G44460,AT5G13130,AT4G19240,AT2G27630,AT2G26690,AT5G53140,AT2G24630,AT1G21660,AT3G20810,AT1G43770,AT3G22360,AT1G76990,AT1G07130,AT4G10170,AT3G27820,AT3G23930,AT3G22780,AT5G27170,AT3G19260,AT3G24750,AT1G05890,AT2G41500,AT5G26040,AT2G46900,AT5G26770,AT5G22980,AT5G38840,AT2G16500,AT3G15490,AT3G55720,AT3G27800,AT3G28450,AT2G27450,AT3G24440,AT3G26140,AT1G12710,AT2G21940,AT2G04630,AT5G48600,AT3G50220,AT3G21140,AT1G32700,AT4G34340,AT1G56070,AT1G13200,AT2G46800,AT2G41600,AT2G36720,AT1G33320,AT4G05040,AT1G51805,AT2G17110,AT3G47500,AT2G25160,AT1G34630,AT3G23890,AT3G04390,AT3G43540,AT4G25800,AT2G27130,AT1G36160,AT2G22940,AT1G30100,AT2G07190,AT3G18270,AT3G11980,AT2G18920,AT3G26740,AT1G33060,AT5G46550,AT3G09380,AT3G51820,AT2G18390,AT3G21690,AT2G32290,AT3G27520,AT2G45790,AT1G52970,AT5G46560,AT4G03960,AT3G09960,AT2G18690,AT2G25210,AT2G15670,AT3G55500,AT2G02880,AT3G27690,AT3G46110,AT5G13830,AT3G46580,AT1G51830,AT5G03850,AT3G49370,AT3G51010,AT5G39030,AT2G18620,AT3G22350,AT2G13690,AT5G26720,AT3G25640,AT3G05530,AT1G04950,AT1G77500,AT5G17020,AT3G23325,AT2G39440,AT4G02590,AT3G14670,AT3G04100,AT3G26570,AT2G03740,AT3G26380,AT2G16835,AT2G29040,AT3G29796,AT3G29792,AT5G14880,AT5G11300,AT2G42040,AT5G22730,AT3G26700,AT3G15605,AT3G46600,AT5G64400,AT2G21655,AT2G25230,AT5G01680,AT3G45750,AT2G36930,AT3G44550,AT1G64440,AT3G44100,AT3G20680,AT4G17590,AT1G52080,AT3G27640,AT2G22490,AT5G54410,AT3G47530,AT3G47860,AT4G26140,AT5G24600,AT4G39280,AT2G36940,AT4G01560,AT1G17790,AT4G26640,AT1G05010,AT1G18750,AT1G62770,AT3G47833,AT4G03380,AT5G17050,AT1G01790,AT3G22570,AT2G27310,AT4G07940,AT5G09760,AT4G02320,AT5G19980,AT2G44240,AT2G19400,AT1G60420,AT3G51830,AT2G23290,AT2G02280,AT1G02280,AT2G03820,AT1G33070,AT2G14660,AT5G23250,AT3G16130,AT1G75690,AT3G24760,AT5G26630,AT4G09640,AT2G46470,AT2G02470,AT4G09490,AT1G44446,AT5G38460,AT3G17160,AT1G10430,AT1G70480,AT3G23190,AT1G33110,AT1G43730,AT3G16080,AT4G05520,AT1G04330,AT2G30580,AT1G69990,AT4G25330,AT2G20020,AT5G27270,AT4G01090,AT3G47640,AT2G17060,AT3G17300,AT3G27290,AT2G33500,AT3G19360,AT1G04420,AT1G24610,AT3G18350,AT2G34700,AT3G27060,AT1G12930,AT1G31930,AT3G55410,AT2G06960,AT5G22970,AT4G04750,AT1G44900,AT5G02370,AT1G12700,AT2G15420,AT1G18600,AT3G46720,AT1G03210,AT3G01150,AT3G09280,AT3G46590,AT5G34940,AT1G51790,AT2G04540,AT3G55850,AT3G53920,AT1G32330,AT3G50750,AT3G44630,AT5G01670,AT2G02500,AT2G19430,AT5G42740,AT5G22390,AT2G26500,AT5G27620,AT3G11590,AT3G27700,AT1G34400,AT2G05810,AT2G26730,AT2G18980,AT5G21160,AT1G09600,AT3G23250,AT1G01650,AT3G44250,AT5G53120,AT3G26100,AT5G39670,AT4G05230,AT4G02900,AT2G30150,AT2G14080,AT2G17900,AT2G22470,AT3G49890,AT3G55250,AT2G01250,AT2G01880,AT2G38270,AT5G46180,AT2G01440,AT1G53080,AT2G25680,AT1G34410,AT3G29070,AT3G30730,AT2G02740,AT1G26410,AT1G56570,AT2G01330,AT1G31070,AT2G16200,AT2G16780,AT3G25120,AT2G15960,AT1G34510,AT1G45230,AT3G54350,AT1G59540,AT1G27670,AT2G25100,AT3G45210,AT4G03200,AT2G05850,AT2G20960,AT5G25360,AT1G03770,AT3G46480,AT1G72570,AT2G39710,AT3G48710,AT3G46430,AT2G04780,AT3G45490,AT3G19553,AT3G11510,AT2G47940,AT3G20160,AT5G01660,AT4G01550,AT2G27330,AT5G51010,AT2G44180,AT2G16600,AT4G11790,AT5G02590,AT2G21320,AT4G05180,AT5G13200,AT1G48050,AT1G49760,AT5G26890,AT3G04870,AT1G69380,AT1G35420,AT4G00270,AT4G11410,AT3G20030,AT2G18290,AT5G28780,AT3G16690,AT2G30070,AT1G27160,AT5G48590,AT3G25210,AT3G25190,AT1G44960,AT1G66580,AT2G35160,AT2G32500,AT3G26750,AT3G25250,AT1G01700,AT2G06050,AT1G07970,AT1G44835,AT3G46380,AT2G04360,AT5G37170,AT5G45590,AT1G19170,AT2G14540,AT1G60280,AT3G47570,AT3G50200,AT4G09800,AT2G02130,AT1G78630,AT3G49510,AT1G50280,AT1G20970,AT2G14960,AT3G19940,AT3G17470,AT4G01250,AT2G40030,AT1G60400,AT4G04880,AT2G26570,AT5G18990,AT1G35340,AT2G34120,AT2G39705,AT1G22030,AT1G64880,AT3G18520,AT3G25720,AT2G02630,AT1G44110,AT1G26440,AT5G57590,AT4G01840,AT3G29370,AT1G36756,AT2G04675,AT2G23470,AT5G20930,AT3G26560,AT1G12940,AT2G36835,AT1G12150,AT5G54140,AT2G17340,AT3G23880,AT1G31770,AT5G42310,AT3G23640,AT3G43290,AT2G22300,AT2G21780,AT1G53660,AT2G13650,AT5G33370,AT1G58100,AT3G14000,AT5G43080,AT4G33900,AT2G41590,AT1G54740,AT4G15110,AT1G43320,AT2G15820,AT1G10380,AT2G13720,AT5G27820,AT1G37150,AT1G28050,AT3G23790,AT2G04160,AT3G29300,AT3G11870,AT3G28850,AT5G52860,AT1G15670,AT2G16870,AT5G43270,AT1G80960,AT5G28680,AT2G04370,AT4G01710,AT2G01540,AT1G54030,AT1G27150,AT3G13570,AT2G02520,AT5G13480,AT3G28390,AT5G43920,AT4G04960,AT2G05830,AT2G27610,AT2G47280,AT3G24982,AT3G25850,AT5G24940,AT1G50300,AT5G27700,AT5G27990,AT3G49910,AT4G02540,AT2G27260,AT3G27070,AT4G18450,AT4G35770,AT3G23390,AT5G27230,AT5G23120,AT3G60560,AT2G40300,AT2G17820,AT1G08730,AT4G10090,AT4G02860,AT5G02980,AT3G04500,AT1G67580,AT5G42540,AT3G27560,AT3G47780,AT1G34750,AT1G36510,AT2G20450,AT4G12460,AT1G52000,AT3G55660,AT3G12850,AT2G33370,AT3G21680,AT1G30820,AT1G12620,AT1G01800,AT3G61860,AT4G03100,AT2G04795,AT2G39920,AT5G07040,AT4G10480,AT3G46370,AT3G14680,AT2G20060,AT3G42860,AT2G23440,AT3G28560,AT1G65590,AT3G50530,AT3G21100,AT2G03280,AT5G23430,AT1G19160,AT2G45240,AT2G30390,AT1G59510,AT2G07560,AT1G47740,AT4G04490,AT3G53340,AT2G18650,AT5G11470,AT5G52520,AT4G07960,AT3G11750,AT2G04860,AT5G45800,AT5G28290,AT3G25130,AT3G08660,AT1G69920,AT1G52990,AT2G01060,AT2G30210,AT3G13820,AT5G17870,AT2G17120,AT3G23100,AT2G32720,AT2G01590,AT3G07990,AT2G01570,AT1G32580,AT3G45860,AT2G01680,AT5G36960,AT3G25890,AT4G00550,AT3G29575,AT2G04740,AT3G60360,AT5G11790,AT1G01080,AT3G23210,AT1G09240,AT4G03280,AT5G39210,AT3G56710,AT2G28470,AT1G62790,AT3G16310,AT2G17480,AT3G24430,AT3G28310,AT4G00416,AT5G26210,AT5G39830,AT3G50810,AT3G44680,AT2G41560,AT3G29185,AT1G10400,AT2G31480,AT3G29230,AT1G52160,AT1G57750,AT3G46900,AT1G34290,AT1G31830,AT3G46940,AT3G50320,AT3G17710,AT3G51590,AT3G14210,AT2G02700,AT2G24570,AT3G22530,AT2G24560,AT3G20930,AT1G59990,AT3G24210,AT4G39270,AT3G22760,AT5G37840,AT3G13580,AT3G43270,AT1G44760,AT4G09890,AT5G62100,AT3G42960,AT4G09030,AT2G40960,AT2G16060,AT1G71870,AT1G53360,AT3G08570,AT1G50350,AT1G35560,AT5G26570,AT2G41650,AT3G62050,AT5G41490,AT5G51080,AT2G27060,AT2G15690,AT2G01310,AT3G58570,AT2G01400,AT4G30150,AT5G15560,AT4G04760,AT1G12110,AT2G15300,AT3G09270,AT3G25855,AT2G02220,AT5G39600,AT5G02070,AT2G13550,AT5G11420,AT2G47950,AT3G23080,AT2G13900,AT5G19040,AT5G18570,AT3G50540,AT2G03380,AT4G08280,AT5G28190,AT5G06020,AT3G43430,AT5G48560,AT2G17250,AT5G37890,AT4G05340,AT4G03630,AT2G26240,AT3G56070,AT4G12420,AT1G51080,AT3G04720,AT2G28570,AT1G70560,AT2G26350,AT5G28820,AT5G66310,AT1G34650,AT5G26200,AT1G02860,AT2G02590,AT3G46560,AT4G09730,AT3G28760,AT2G13600,AT1G31970,AT3G59760,AT3G10960,AT3G28900,AT3G17820,AT2G02780,AT2G17260,AT3G27740,AT2G31360,AT1G14810,AT4G08690,AT2G02620,AT4G03740,AT3G52500,AT3G16010,AT3G07110,AT5G11310,AT5G24310,AT3G52380,AT2G01870,AT1G59890,AT2G15050,AT3G60910,AT1G57770,AT1G47370,AT3G18524,AT3G21580,AT2G18220,AT1G31450,AT4G08530,AT2G22680,AT3G56700,AT1G32350,AT5G50780,AT2G31980,AT2G04530,AT2G38970,AT2G02440,AT3G29750,AT2G17033,AT2G28490,AT3G26710,AT1G58110,AT1G11300,AT1G17910,AT2G01750,AT2G04063,AT3G11880,AT2G23760,AT1G04880,AT5G47530,AT5G06180,AT3G54960,AT3G05720,AT3G18930,AT3G24790,AT5G12910,AT3G43950,AT4G08370,AT3G26782,AT1G18810,AT3G14370,AT3G08620,AT2G04025,AT1G01110,AT2G01450,AT4G14360,AT1G47300,AT3G21560,AT4G04940,AT2G34880,AT5G39980,AT3G54920,AT2G04450,AT3G15590,AT2G38320,AT1G18910,AT3G25070,AT2G35980,AT3G60630,AT5G35735,AT4G04110,AT1G21050,AT4G05620,AT3G51870,AT3G53310,AT2G04070,AT5G66800,AT5G23850,AT3G45260,AT1G56710,AT2G37450,AT1G70510,AT1G72580,AT3G28420,AT1G54180,AT2G03550,AT5G25550,AT1G12020,AT2G18890,AT5G35090,AT1G01660,AT2G16230,AT3G29075,AT2G17950,AT2G45630,AT2G43620,AT3G17830,AT3G28920,AT5G28080,AT2G26490,AT3G26330,AT4G10130,AT1G20910,AT2G06925,AT5G36950,AT2G06850,AT5G42030,AT2G04030,AT3G45680,AT2G02980,AT2G17680,AT1G32930,AT1G18250,AT1G53430,AT4G24600,AT5G51090,AT3G23460,AT1G35190,AT5G36940,AT2G28010,AT5G27220,AT3G29110,AT1G48095,AT2G34900,AT2G06020,AT3G50190,AT1G30530,AT4G03060,AT3G55400,AT1G67590,AT1G29980,AT2G31070,AT2G11010,AT1G72050,AT3G23560,AT4G15630,AT3G54090,AT2G02680,AT5G39860,AT1G13710,AT2G25980,AT3G12040,AT2G37440,AT1G55020,AT5G35670,AT2G15000,AT2G14050,AT2G35155,AT3G54270,AT3G30180,AT2G18360,AT3G26220,AT3G28210,AT3G25650,AT1G51950,AT5G51060,AT3G10890,AT2G29800,AT3G21110,AT5G13350,AT3G16220,AT2G01150,AT1G02800,AT5G48000,AT1G67750,AT3G44720,AT1G51700,AT4G08450,AT5G48030,AT1G62410,AT5G41800,AT1G05470,AT4G24020,AT3G47620,AT1G10420,AT3G44610,AT2G01420,AT3G54820,AT5G46690,AT3G54940,AT5G23180,AT4G26370,AT3G42800,AT4G02750,AT2G18500,AT2G15010,AT1G22720,AT2G20180,AT5G48170,AT2G03090,AT2G04790,AT5G11160,AT1G05690,AT5G46700,AT1G65880,AT3G17700,AT3G21470,AT3G43720,AT1G31320,AT2G26580,AT3G13730,AT3G50660,AT4G03190,AT3G45310,AT2G01950,AT1G34640,AT1G70460,AT2G02550,AT1G51840,AT1G32240,AT3G22420,AT5G42370,AT1G52770,AT3G19040,AT3G20840,AT3G48420,AT3G02250,AT1G51190,AT2G16430,AT1G08430,AT3G28345,AT3G30350,AT2G03830,AT3G15720,AT4G08150 MANG_RST1-MUTANT_UP Up-regulated-JA synthesis, perception, and response genes in rst1 mutants (Table 3 PubmedID:19625635) AT3G45140,AT1G17420,AT1G72520,AT2G06050,AT4G05160,AT2G33150,AT1G32230,A4G11260,AT1G74950,AT1G17380,AT1G71030,AT2G34600,AT1G70700,AT2G14580,AT2G24850,AT1G52030,AT4G01060,AT4G01280,AT4G23100,AT4G23600,AT5G24770,AT5G44420,AT5G44430,AT2G26020,AT2G26010,AT1G52400,AT2G43570,AT4G37520,AT3G26830,AT4G30950 NISHIMURA_AHG2-1_UP Up- regulated in ahg2-1 (log2 < -1 or log2 >1) (Table S1 PubmedID:19892832) AT2G07727,AT2G07687,AT5G09570,ATMG01360,ATMG00270,ATMG01040,AT1G47400,ATMG00110,AT3G56980,AT4G21490,ATMG00520,ATMG00960,ATMG00070,AT4G19690,ATMG00640,AT2G07696,AT5G04150,ATMG00510,ATMG00650,AT2G28820,AT2G07675,ATMG00160,AT2G20800,ATMG00570,AT2G21640,AT2G07676,AT1G12030,AT2G07707,AT2G47520,ATMG01130,ATMG00660,AT3G05950,ATMG00580,AT2G18660,AT1G56430,ATMG01190,AT5G05250,AT2G03130,AT2G07734,AT2G24850,AT4G22950,AT1G36180,AT1G02520,ATMG00830,ATMG01080,AT5G24280,ATMG01200,ATMG00500,AT1G17180,AT2G07751,AT3G21720,AT5G26270,AT3G55970,AT1G32870,AT5G60250,AT3G22231,AT3G15310,ATMG01000,AT5G53450,AT1G30160,AT1G33960,AT4G33070,ATMG00080,ATMG00060,AT2G07715,AT1G74760,AT1G24090,AT3G57260,ATMG00180,ATMG01280,AT2G35480,ATMG00690,AT2G07725,AT3G05730,AT1G18970,AT3G47640,AT4G30140,AT4G16370,AT1G50400,AT3G18290,AT2G32020,AT4G23990,AT5G51440,AT3G16670,ATMG01170,AT2G07777,AT1G23020,AT3G48640,AT2G16060,AT5G26920,AT5G46830,AT5G54100,AT5G14580,ATCG00330,AT3G43190,AT5G44420,AT5G60730,AT2G39510,AT3G56710,AT1G77120,AT4G39740,AT2G07718,AT1G56650,AT5G36910,AT3G59820,AT5G08030,AT1G54020,AT4G36580,ATMG00940,AT1G17170,AT2G37890,AT1G20350,AT5G10760,AT2G41730,AT5G54060,AT5G55620,AT3G30180,AT1G03940,AT5G39890,AT1G72260,AT3G47780,AT3G22370,AT4G01390,AT5G58840,AT5G09420,AT1G30960,AT2G40670,AT5G24660,AT1G64220,AT5G05600,AT2G03760,AT4G01630,AT5G03350,ATMG01180,AT2G47010,AT3G28220,AT2G04070,AT3G51860,AT3G61630,AT1G52030,AT5G16930,AT2G14560,AT2G14610,AT3G15357,AT2G04050,AT3G49320,AT5G48850,AT2G39030,AT5G13320,AT1G52000,AT3G45860,AT1G02530,AT1G52040,AT2G07671,AT2G07695,AT2G07698,AT5G32621,ATMG00090,ATMG00210,ATMG00220,ATMG00290,ATMG00410,ATMG00480,ATMG00490,ATMG00513,ATMG00560,ATMG00590,ATMG00730,ATMG00980,ATMG00990,ATMG01090,ATMG01270,AT2G07708,AT2G07741,ATMG00040,ATMG00665 NISHIMURA_AHG2-1_DN Down-regulated in ahg2-1 (log2 < -1 or log2 >1) (Table S1 PubmedID:19892832) AT4G26220,AT5G06640,AT1G26390,AT3G55150,AT2G22510,AT3G57690,AT2G03200,AT2G39400,AT2G24610,AT3G13700,AT1G64480,AT4G18550,AT5G59090,AT1G51800,AT2G39040,AT4G26520,AT4G20230,AT5G67520,AT5G17410,AT1G76410,AT4G30170,AT3G13760,AT4G25810,AT1G51280,AT2G23620,AT1G02640,AT1G13300,AT4G01700,AT5G06690,AT3G22060,AT5G19790,AT2G37870,AT1G57750,AT5G01520,AT3G02480,AT1G80240,AT5G37540,AT1G75590,AT3G57540,AT5G10770,AT5G49270,AT2G45750,AT3G13672,AT3G61060,AT2G47540,AT4G36670,AT5G57530,AT3G28830,AT3G62950,AT5G43780,AT4G15680,AT5G12940,AT3G26460,AT3G24460,AT1G19530,AT2G19800,AT3G10710,AT1G53540,AT4G23220,AT3G14280,AT5G54190,AT3G13840,AT1G51890,AT5G22460,AT3G28750,AT5G14090,AT4G09420,AT5G45890,AT4G28530,AT4G34580,AT1G64110,AT4G40090,AT2G33830,AT1G08500,AT1G57590,AT1G24320,AT1G51920,AT1G10340,AT5G66400,AT5G05340,AT5G53870,AT3G56000,AT2G44480,AT5G45310,AT2G41190,AT1G19940,AT2G28780,AT2G01580,AT5G06760,AT5G60660,AT3G62280,AT3G53800,AT1G17870,AT3G49160,AT5G37970,AT3G06390,AT5G09930,AT1G69940,AT5G59220,AT4G08300,AT5G04120,AT3G07850,AT3G25790,AT3G59480,AT4G00680,AT1G52690,AT5G58310,AT3G16150,AT3G47040,AT4G30280,AT2G47770,AT5G05390,AT1G76800,AT5G53250,AT2G22860,AT3G54590,AT5G13170,AT4G33730,AT1G18100,AT2G23030,AT1G48930,AT2G44110,AT5G51720,AT1G19900,AT5G60490,AT4G39675,AT5G45880,AT5G46050,AT5G59310,AT2G39200,AT5G52300,AT5G67450,AT3G26200,AT3G54580,AT3G46280,AT1G01750,AT5G14380,AT4G15400,AT1G65310,AT4G13800,AT4G22470,AT1G10550,AT1G34040,AT5G50260,AT1G26380,AT5G22410,AT1G02790,AT4G12330,AT5G42180,AT2G43050,AT4G09990,AT3G13400,AT5G46900,AT3G01270,AT1G61566,AT1G80170,AT3G18250,AT1G07430,AT2G47050,AT3G02850,AT1G02810,AT1G08430,AT2G44370,AT1G10770,AT1G26410,AT5G47000,AT3G07820,AT1G62280,AT1G62980,AT4G12480,AT1G78950,AT5G43520,AT4G31940,AT5G39580,AT1G65500,AT1G12560,AT1G62510,AT4G30670,AT3G30720,AT2G33790,AT5G05500,AT2G43620,AT3G59845,AT5G42600,AT1G34510,AT2G47040,AT1G49860,AT3G49960,AT2G19190,AT4G07820,AT1G05250,AT5G47450,AT1G30870,AT4G02270,AT4G12490,AT5G67400,AT1G22480,AT2G36690,AT4G26010,AT5G62340,AT3G62680,AT5G04960,AT2G17740,AT4G25820,AT4G12500,AT4G33720,AT1G59218,AT1G05240,AT1G58848,AT3G13710,AT3G14040,AT4G26530,AT4G30290,AT4G31970,AT5G07410,AT5G17420,AT5G19780,AT5G57540 NISHIMURA_AHG2-1_SID2-OR-ABI1-MUTATION_UP The ahg2-1 up-regulated genes whose expressions were affected by sid2 or abi1 mutation. (Table S2 PubmedID:19892832) AT1G47400,AT3G56980,AT4G19690,AT5G04150,AT1G12030,AT3G05950,AT2G18660,AT5G05250,AT2G24850,AT5G26270,AT3G22231,AT5G53450,AT1G33960,AT1G74770,AT3G57260,AT3G05730,AT3G47640,AT4G30140,AT4G16370,AT3G18290,AT4G23990,AT3G16670,ATMG01090,AT1G23020,AT3G48640,AT5G46830,ATCG00330,AT3G43190,AT5G44420,AT3G56710,AT1G77120,ATMG00590,AT1G56650,AT1G54020,ATMG00940,AT1G17170,AT5G10760,AT5G54060,AT1G03940,AT5G39890,AT1G72260,AT4G01390,AT5G58840,AT5G24660,AT4G01630,AT5G03350,AT3G28220,AT3G51860,AT1G52030,AT2G14560,AT2G14610,AT5G48850,AT2G39030,AT5G13320,AT1G52000,AT3G45860,AT1G03495,AT1G52040,AT2G07677,AT2G07718,AT2G07777 NISHIMURA_AHG2-1_SID2-OR-ABI1-MUTATION_DN The ahg2-1 down-regulated genes whose expressions were affected by sid2 or abi1 mutation. (Table S2 PubmedID:19892832) AT1G26390,AT3G57690,AT2G03200,AT2G39400,AT4G18550,AT5G59090,AT1G51800,AT4G26530,AT4G20230,AT5G67520,AT5G17420,AT1G76410,AT4G30170,AT3G13760,AT4G25810,AT1G51270,AT2G23620,AT1G02640,AT1G13300,AT4G01700,AT5G06690,AT3G22060,AT2G37870,AT1G57750,AT3G02480,AT1G80240,AT2G45750,AT3G13672,AT3G61060,AT4G36670,AT3G28830,AT4G15680,AT3G26460,AT3G24460,AT1G19530,AT1G53540,AT4G23220,AT3G14280,AT5G54190,AT3G13840,AT1G51890,AT3G28750,AT5G14090,AT4G09420,AT1G64110,AT2G33830,AT1G57590,AT1G51920,AT1G10340,AT5G66400,AT5G05340,AT5G53870,AT2G44480,AT5G45310,AT2G41190,AT1G19940,AT5G06760,AT3G62280,AT3G53800,AT1G17870,AT3G49160,AT1G69940,AT5G59220,AT5G04120,AT3G07850,AT3G25790,AT1G52690,AT5G58310,AT3G16150,AT2G47770,AT5G05390,AT2G22860,AT5G13170,AT2G23030,AT5G51720,AT5G60490,AT5G45880,AT5G46050,AT2G39200,AT5G67450,AT3G26200,AT3G46280,AT5G14380,AT4G13800,AT4G22470,AT1G10550,AT1G26380,AT1G02790,AT4G12330,AT5G42180,AT2G43050,AT3G13400,AT5G46900,AT3G01270,AT1G61563,AT1G80170,AT3G18250,AT2G47050,AT1G02810,AT1G08430,AT2G44370,AT1G10770,AT1G26410,AT5G47000,AT3G07820,AT4G12480,AT1G78950,AT4G31970,AT5G39580,AT1G65500,AT4G30670,AT2G43620,AT3G59845,AT5G42600,AT2G47040,AT1G49860,AT2G19190,AT4G07820,AT1G05250,AT4G02270,AT4G12490,AT1G22480,AT2G36690,AT2G17740,AT4G12500,AT4G33720,AT1G59218,AT1G05240,AT1G58848,AT1G61566,AT2G47030,AT3G14040,AT5G07410,AT5G46890 NISHIMURA_ABI1_AHG2-1_UP Increased by abi1 in ahg2-1 back ground. (Table S3 PubmedID:19892832) AT4G03050,AT5G24240,AT4G31570,AT1G10110,AT4G19240,AT4G29770,AT5G39100,AT5G48350,AT5G48090,AT1G09420,AT4G22280,AT3G44070,AT4G16920,AT4G23130,AT2G19850,AT5G39640,AT2G40330,AT5G47250,AT5G15360,AT1G10920,AT5G64510,AT5G59650,AT4G27050,AT5G54930,AT1G13470,AT4G01270,AT5G52070,AT4G18330,AT3G29410,AT4G11000,AT5G64630,AT1G10880,AT5G46050,AT5G60100,AT4G22350,AT1G50290,AT5G46780,AT4G16800,AT3G23970,AT5G46730,AT4G21870,AT5G02080,AT5G40060,AT1G78450,AT3G30530,AT1G17610,AT4G00970,AT4G03400,AT2G26440,AT5G64000,AT1G10550,AT5G45040,AT2G25735,AT3G54920,AT1G69720,AT3G46880,AT1G49860,AT4G22960,AT5G47540,AT3G45880,AT5G54400,AT4G25150,AT5G46760,AT4G08770,AT4G17510,AT4G34650,AT5G47000,AT4G18975,AT5G03090,AT3G45440,AT5G46750,AT4G04635,AT2G43200,AT3G26460,AT1G12790,AT3G49310,AT5G67520,AT4G04955,AT1G02300,AT3G48650,AT4G10920,AT5G51480,AT4G33000,AT4G37770,AT4G17180,AT5G46140,AT5G62740,AT5G43680,AT4G35480,AT3G30340,AT5G05440,AT5G11610,AT5G63810,AT4G27440,AT3G60290,AT5G46740,AT3G02980,AT5G54090,AT5G50335,AT2G15560,AT3G25730,AT1G05575,AT3G46110,AT2G38310,AT1G68320,AT4G34880,AT4G18250,AT3G19550,AT4G25110,AT5G39860,AT5G60900,AT1G66050,AT2G07180,AT4G21840,AT5G46330,AT5G44820,AT5G27940,AT1G12350,AT4G21830,AT5G39550,AT1G66040 NISHIMURA_ABI1_AHG2-1_DN Decreased by abi1 in ahg2-1 back ground. (Table S3 PubmedID:19892832) AT4G33360,AT4G11100,AT3G21520,AT4G01920,AT4G13100,AT4G10770,AT5G63030,AT5G41140,AT4G19400,AT3G46980,AT4G36150,AT3G07610,AT5G47940,AT3G63330,ATCG00730,AT2G48140,AT4G13630,AT3G46450,AT2G45570,AT5G24150,AT3G16750,AT5G50400,AT4G00880,AT4G00110,AT3G19515,AT4G29740,AT4G12460,AT4G25710,AT5G43270,AT4G29020,AT4G18580,AT4G37990,AT2G36490,AT3G53710,AT5G66750,AT1G10910,AT4G35090,AT4G03320,AT4G21860,AT5G40820,AT4G00050,AT5G62210,AT5G50120,AT5G57410,AT5G39990,AT5G43860,AT4G16980,AT4G12030,AT5G47610,AT3G26830,AT4G19230,AT5G59130,AT5G63080,AT5G50630,AT4G16990,AT4G08500,AT3G46370,AT5G42720,AT4G39210,AT4G16710,AT1G22400,AT5G57000,AT4G01590,AT5G45550,AT5G13900,AT5G59510,AT3G44430,AT4G02790,AT5G43150,AT4G16760,AT4G28100,AT4G16900,AT4G26790,AT5G50550,AT4G17030,AT4G02130,AT5G45020,AT4G13050,AT3G21890,AT5G53120,AT4G32960,AT4G05120,AT4G39030,AT4G19490,AT4G22920,AT4G39955,AT5G44580,AT3G61010,AT5G43740,AT1G10730,AT5G41650,AT5G47800,AT4G02410,AT4G19510,AT5G55790,AT5G44920,AT5G62140,AT4G37320,AT5G53050,AT4G01910,AT4G22730,AT4G16960,AT5G50130,AT4G11830,AT4G09680,AT4G25780,AT4G04830,AT5G66060,AT5G44930,AT5G40500,AT5G45420,AT4G39770,AT5G43760,AT4G05040,AT4G05050,AT3G28290,AT5G65850,AT4G08110,AT4G37410,AT5G47810,AT4G03060,AT4G02850,AT5G59340,AT4G16870,AT5G63020,AT5G40950,AT5G45070,AT4G16860,AT4G16890,AT5G56910,AT5G56380,AT5G50565,AT4G21650,AT4G19500,AT4G20480,AT5G45500,AT3G28300,AT4G05110,AT4G08480,AT4G16880,AT4G21640,AT4G22740,AT5G40830,AT5G50520,AT5G50650,AT5G50665,AT5G53130,AT4G16940,AT4G21630 NISHIMURA_ABI2_AHG2-1_UP Increased by sid2 in ahg2-1 back ground. (Table S3 PubmedID:19892832) AT1G76530,AT5G47230,AT5G46350,AT5G58310,AT5G54470,AT4G27654,AT3G11480,AT3G02840,AT1G27730,AT2G45580,AT5G61160,AT4G34410,AT2G46790,AT1G74930,AT1G07450,AT2G46670,AT3G02850 NISHIMURA_ABI2_AHG2-1_DN Reduced by sid2 in ahg2-1 back ground. (Table S3 PubmedID:19892832) AT2G14560,AT2G14610,AT3G57260,AT1G35710,AT1G74700,AT1G74710,AT4G28040,AT5G14610 MOLDOVAN_QRT-PCR_UP Up-regulated -QRT-PCR relative expression of experimentally determined or predicted gene targets of selected smRNAs (Table 5 PubmedID:19815687) AT1G50990,AT2G42090,AT5G18065,AT3G60460,AT4G05360,AT2G26960,AT4G29770,AT1G64100,AT1G68840,AT2G32460,AT5G18040,AT2G26950,AT5G18100,AT2G33810,AT2G39250,AT3G11440,AT3G15270,AT5G06100,AT1G69170,AT1G27360,AT5G52070,AT3G03580,AT5G50570,AT5G42670,AT4G36920,AT3G54990 MOLDOVAN_QRT-PCR_DN Down-regulated -QRT-PCR relative expression of experimentally determined or predicted gene targets of selected smRNAs (Table 5 PubmedID:19815687) AT4G37770,AT1G53290,AT3G61320,AT2G42200,AT5G67180,AT5G43270,AT1G27370,AT2G28550,AT1G53160,AT5G60120,AT3G57920,AT3G27230,AT2G34010,AT1G51670 LEIVAR_PIF_SEED_DARK-GROWN-SEEDLING_DIFF PIF-regulated genes in both seed and dark-grown seedlings. (Dataset 2 PubmedID:19920208) AT2G20180,AT3G62090,AT1G09530,AT2G28400,AT5G02200,AT4G16780,AT2G31980,AT4G25260,AT5G66590,AT4G09610,AT4G01410,AT5G53660,AT1G67100,AT5G45310,AT3G29575,AT3G59060,AT1G03790,AT2G18050,AT1G27990,AT2G22900,AT4G39510,AT5G01870,AT1G29195,AT1G78340,AT1G29910,AT1G69530,AT2G34020,AT5G66920,AT5G02260,AT4G32460,AT4G30290,AT1G15260,AT3G51410,AT1G15550,AT1G75580,AT3G30720,AT1G74670 LEIVAR_SSTF_WT-R1-WT-RC-PIFQ-D/WT-D_DIFF SSTF genes defined as ambiguous since they show converse responses (Induction or Repression) in WT-R1, WT-Rc and/or pifq-D relative to WT-D. (Dataset5 PubmedID:19920208) AT5G67400,AT1G30870,AT5G05500,AT3G47340,AT3G29970,AT4G07820,AT5G42600,AT4G14690,AT5G11260,AT2G16365,AT2G23910,AT4G12410,AT2G17840,AT2G17880,AT1G80440,AT3G48360,AT2G46270,AT5G37300,AT3G59010,AT4G17670,AT3G59060,AT5G06760,AT4G18650,AT3G53250,AT5G59080 LEIVAR_SSTF-C1_WT-R1-WT-RC-PIFQ-D/WT-D_UP Induced SSTF Class 1 genes that are Induced in WT-R1, WT-Rc and/or pifq-D relative to WT-D. (Dataset3 PubmedID:19920208) AT5G55180,AT2G34490,AT3G63200,AT3G03770,AT5G24420,AT4G14090,AT1G12740,AT5G19800,AT1G48930,AT5G08030,AT3G14650,AT1G10640,AT5G59540,AT2G34810,AT4G20430,AT2G39220,AT1G31710,AT3G44970,AT2G23610,AT5G45700,AT3G27400,AT1G23750,AT3G57520,AT4G22870,AT1G73620,AT4G37310,AT2G40840,AT5G10170,AT4G18290,AT3G22104,AT5G42800,AT3G19430,AT2G31790,AT1G21460,AT3G45070,AT4G27820,AT1G22160,AT1G56430,AT4G12440,AT1G78450,AT4G37160,AT5G17220,AT1G23410,AT4G09100,AT1G03940,AT3G28550,AT3G54580,AT3G54590,AT5G49080,AT4G08410,AT5G35190,AT2G03720,AT1G78020,AT3G55710,AT2G41090,AT2G26870,AT5G18430,AT5G09660,AT3G52720,AT4G18570,AT3G05340,AT5G42720,AT4G12390,AT4G09900,AT1G18250,AT3G01660,AT1G48030,AT5G46800,AT5G45650,AT1G73650,AT5G25090,AT3G17470,AT2G29310,AT5G53370,AT1G02730,AT4G24350,AT4G28250,AT3G61820,AT5G09870,AT5G57540,AT1G54970,AT1G01750,AT3G10710,AT1G28600,AT4G30610,AT4G31320,AT4G12980,AT1G05340,AT4G09350,AT2G27290,AT4G03150,AT1G80030,AT1G11700,AT1G72640,AT3G09050,AT1G03680,AT3G51510,AT2G39190,AT1G52510,AT1G62780,AT1G23740,AT5G65840,AT5G45680,AT2G32480,AT1G19740,AT5G49910,AT2G38780,AT1G70580,AT2G30390,AT2G42770,AT2G21340,AT5G05200,AT1G73530,AT3G15357,AT1G74960,AT4G32590,AT2G37240,AT1G77090,AT4G34090,AT1G71500,AT2G45770,AT2G28900,AT1G77060,AT2G36885,AT3G29320,AT3G09580,AT3G28220,AT4G18810,AT5G07020,AT5G19855,AT2G31040,AT4G00895,AT1G70820,AT3G10050,AT1G57770,AT1G32520,AT5G20140,AT2G26080,AT1G79600,AT5G23020,AT3G47860,AT1G67660,AT3G14530,AT1G69830,AT5G13720,AT5G59750,AT2G47910,AT5G02830,AT3G23700,AT3G14415,AT2G32640,AT1G50320,AT5G08410,AT1G31800,AT4G01150,AT5G03650,AT2G37660,AT5G57030,AT5G42310,AT3G55800,AT5G06290,AT2G24820,AT2G36000,AT3G06510,AT2G48070,AT4G26520,AT3G12780,AT2G34860,AT5G36120,AT3G55040,AT3G56650,AT1G43560,AT4G37000,AT4G02800,AT1G32080,AT5G52970,AT1G56050,AT1G62750,AT5G08280,AT1G51100,AT3G04790,AT4G31530,AT2G28605,AT2G01870,AT2G21280,AT3G15840,AT3G10840,AT1G71480,AT3G44020,AT3G15110,AT5G13650,AT1G44575,AT2G35500,AT1G71810,AT1G32220,AT1G44920,AT3G17930,AT4G34830,AT1G15140,AT1G08540,AT3G55250,AT5G66530,AT2G43010,AT2G34180,AT1G19050,AT3G21510,AT5G07450,AT1G55200,AT2G45340,AT4G33270,AT5G22410,AT5G46450,AT3G46530,AT5G63660,AT2G02810,AT1G30360,AT1G75280,AT2G45750,AT3G49960,AT2G42600,AT2G34060,AT4G16950,AT2G22540,AT1G56650,AT1G74500,AT5G11060,AT2G20570,AT4G24660,AT5G61420,AT2G23760,AT3G22760,AT2G40435,AT1G57560,AT2G47890,AT2G26580,AT5G53210,AT2G01760,AT4G32980,AT1G34310,AT1G10470,AT1G64780,AT1G71890,AT5G62220,AT4G16370,AT5G54250,AT2G38460,AT1G16390,AT1G08920,AT1G01790,AT5G63060,AT5G50740,AT5G40500,AT3G51660,AT5G54370,AT2G47540,AT1G30140,AT5G40860,AT4G16410,AT2G32500,AT1G13650,AT3G12685,AT2G33330,AT1G22750,AT5G43150,AT5G38510,AT4G16140,AT2G35960,AT3G45450,AT5G57785,AT1G52060,AT5G36710,AT4G34560,AT5G54790,AT3G01730,AT5G10130,AT1G50060,AT3G18170,AT5G24313,AT3G02870,AT4G22710,AT1G31335,AT1G29530,AT5G60880,AT1G63360,AT3G57160,AT1G52070,AT2G03420 LEIVAR_SSTF-C2_WT-R1-WT-RC-PIFQ-D/WT-D_UP Induced SSTF Class 2 genes that are Induced in WT-R1, WT-Rc and/or pifq-D relative to WT-D. (Dataset3 PubmedID:19920208) AT1G22650,AT1G13700,AT1G58180,AT2G24280,AT4G18340,AT4G19420,AT1G73920,AT3G50790,AT4G12430,AT3G52340,AT1G35612,AT2G30600,AT2G37450,AT5G04530,AT5G48000,AT5G14120,AT3G43670,AT3G53280,AT1G68080,AT4G21180,AT1G08630,AT3G13450,AT1G60550,AT5G18600,AT5G49160,AT3G55630,AT5G52120,AT5G57560,AT3G52840,AT2G37030,AT2G21210,AT1G75580,AT5G40850,AT3G53470,AT2G33180,AT1G11720,AT2G20670,AT2G44230,AT3G22150,AT5G53490,AT5G26000,AT5G10690,AT1G80380,AT4G19830,AT5G16240,AT1G54350,AT5G04190,AT4G27300,AT4G38690,AT3G49160,AT1G11350,AT1G70430,AT4G04040,AT1G16260,AT5G51890,AT1G73330,AT5G20320,AT2G14610,AT3G47620,AT1G15580,AT2G01930,AT1G15050,AT1G68840,AT5G02840,AT1G72140,AT1G15180,AT2G30070,AT2G15050,AT5G27350,AT3G30720,AT2G15960,AT1G43590,AT2G16005,AT3G47295,AT3G06840,AT5G22270,AT3G49140,AT3G21950,AT3G18980,AT5G56100,AT3G07350,AT5G12050,AT2G46220,AT3G59930,AT1G19715,AT4G12970,AT1G51430,AT4G37300,AT3G02670,AT1G43790,AT2G44130,AT1G22890,AT1G52100,AT3G16670,AT1G22885 LEIVAR_SSTF-C3_WT-R1-WT-RC-PIFQ-D/WT-D_UP Induced SSTF Class 3 genes that are Induced in WT-R1, WT-Rc and/or pifq-D relative to WT-D. (Dataset3 PubmedID:19920208) AT4G19450,AT1G18660,AT1G67070,AT5G01520,AT5G03190,AT3G30460,AT2G42620,AT2G36800,AT1G72770,AT2G43900,AT3G57540,AT4G11360,AT5G66460,AT2G44750,AT1G21410,AT5G53760,AT4G10040,AT5G58760,AT3G48520,AT2G23000,AT1G65560,AT3G21560,AT1G69640,AT1G15100,AT2G25160,AT5G18670,AT1G12240,AT5G43260,AT5G15950,AT4G30470,AT2G26170,AT3G23920,AT1G73480,AT2G30040,AT3G23530,AT3G21390,AT1G66330,AT1G27120,AT4G15690,AT5G44530,AT4G15660,AT4G15680,AT5G19970,AT3G57010,AT4G15700,AT1G71710,AT3G14690,AT5G20840,AT2G03240,AT3G59710,AT3G15090,AT5G03960,AT4G15920,AT5G41400,AT1G49660,AT2G42490,AT3G48700,AT3G52370,AT3G23810,AT2G41870,AT4G16690,AT5G19850,AT3G54420,AT4G23990,AT3G44735,AT5G24460,AT2G36870,AT2G25450,AT1G78440,AT4G21200,AT1G30040,AT5G15910,AT1G76570,AT2G39800,AT4G28290,AT3G17800,AT1G20070,AT3G07700,AT5G58770,AT1G08570,AT1G78510,AT5G20070,AT5G59220,AT1G06690,AT1G73990,AT2G40100,AT4G17840,AT3G29200,AT4G23450,AT5G14760,AT2G21970,AT5G26030,AT1G64970,AT5G42270,AT2G33250,AT1G78070,AT3G57830,AT4G29950,AT5G58380,AT3G24500,AT1G53090,AT4G11330,AT3G11410,AT3G02140,AT1G73660,AT1G69260,AT3G08730,AT2G32950,AT3G16800,AT3G15470,AT1G08650,AT2G15310,AT5G57630,AT1G22770,AT2G02950,AT5G53500,AT4G24960,AT1G13080,AT1G77280,AT5G63380,AT2G22240,AT2G29450,AT1G80130,AT3G12580,AT5G59820,AT3G17790,AT5G49480,AT5G58750,AT1G06180,AT4G38960,AT4G24790,AT5G09230,AT5G56860,AT4G26150,AT4G05100,AT1G22640,AT5G04340,AT4G01120,AT2G45680,AT5G54470,AT5G02810,AT3G57040,AT2G46680,AT5G60850,AT5G39660,AT2G28550,AT1G19700,AT5G37260,AT2G36080,AT4G25480,AT4G34000,AT1G70700,AT2G46410,AT1G01520,AT3G22830,AT1G77450,AT3G23210,AT5G67300,AT5G49330,AT5G65310,AT4G38620,AT2G35940,AT5G54230,AT5G52660,AT2G46670,AT4G08930,AT5G62470,AT4G31920,AT3G19290,AT2G22800,AT3G16350,AT4G00050,AT1G09540,AT4G16750,AT2G33710,AT3G24520,AT5G05410,AT4G37610,AT3G46450,AT2G46800,AT5G02280,AT5G20380,AT1G33110,AT3G09520,AT3G24840,AT3G27170,AT3G11900,AT1G61890,AT3G47960,AT4G01660,AT5G62130,AT4G38060,AT5G03230,AT2G21560,AT1G78100,AT1G20890,AT4G27657,AT3G10912,AT1G32690,AT1G76210,AT1G13970,AT1G79270,AT4G12000,AT3G24750,AT4G35560,AT1G70420,AT3G07360,AT1G68440,AT5G15190,AT1G13740,AT2G46420,AT5G64780,AT4G15630,AT2G39560,AT1G55960,AT5G04830,AT1G13670,AT2G28320,AT5G56240,AT4G35660,AT4G25830,AT4G36500,AT3G44450,AT5G37550,AT1G72240,AT2G41000,AT5G04820,AT5G59050,AT5G12010,AT3G49210,AT5G51040,AT1G42550 LEIVAR_SSTF-C4_WT-R1-WT-RC-PIFQ-D/WT-D_UP Induced SSTF Class 4 genes that are Induced in WT-R1, WT-Rc and/or pifq-D relative to WT-D. (Dataset3 PubmedID:19920208) AT4G37550,AT4G33000,AT4G02850,AT3G05180,AT2G43800,AT1G07440,AT1G22400,AT3G49260,AT2G29360,AT3G23410,AT1G77760,AT3G47380,AT3G19000,AT1G10360,AT3G46540,AT1G66130,AT3G05730,AT4G28780,AT4G22753,AT2G29290,AT1G21500,AT3G05600,AT1G33811,AT4G11320,AT1G72610,AT4G17245,AT1G28570,AT3G46490,AT1G11300,AT1G78460,AT2G22980,AT3G50270,AT5G65010,AT4G17470,AT5G07240,AT3G02020,AT1G32540,AT1G21130,AT2G22990,AT1G02300,AT1G78490,AT3G47560,AT3G16520,AT3G10280,AT3G19850,AT2G40960,AT1G31920,AT5G44680,AT3G62820,AT5G16540,AT5G38020,AT3G04290,AT5G51010,AT1G27480,AT4G24780,AT4G22570,AT4G36220,AT1G06830,AT2G30540,AT3G15570,AT3G53190,AT4G37930,AT4G34160,AT2G23600,AT5G62630,AT5G47500,AT5G16190,AT5G03350,AT5G65730,AT5G12110,AT1G33590,AT4G38420,AT3G29030,AT2G28950,AT1G74670,AT1G05010,AT1G04350,AT1G06650,AT1G22690,AT3G50820,AT1G15820,AT3G18890,AT1G51400,AT1G61520,AT2G21330,AT4G12800,AT4G09650,AT3G21055,AT5G66570,AT1G75690,AT1G55670,AT1G30520,AT1G65230,AT3G56940,AT5G38520,AT5G02120,AT1G06680,AT4G01050,AT4G22890,AT5G02940,AT2G39730,AT4G39710,AT1G53520,AT1G18060,AT5G17170,AT2G30570,AT5G36790,AT5G16400,AT5G51460,AT1G74070,AT4G28706,AT3G47070,AT5G17670,AT1G79040,AT1G03630,AT5G18660,AT2G34460,AT1G55480,AT2G04039,AT3G61870,AT1G32900,AT1G73110,AT4G28660,AT5G43745,AT1G54500,AT3G46630,AT4G33010,AT5G16010,AT1G12250,AT5G58330,AT1G76450,AT3G59780,AT4G03280,AT4G05180,AT3G47470,AT1G52230,AT1G75460,AT2G20260,AT4G28750,AT3G61470,AT5G01530,AT3G16000,AT3G16470,AT1G19150,AT3G54050,AT1G03600,AT1G55370,AT1G52220,AT3G52070,AT5G43750,AT4G18370,AT1G17220,AT3G08920,AT3G11670,AT3G15360,AT1G67700,AT1G60950,AT3G16140,AT2G39470,AT4G21280,AT1G29910,AT3G46780,AT1G76100,AT3G01500,AT5G23060,AT2G42220,AT1G03130,AT1G12900,AT1G08380,AT5G64040,AT3G63140,AT3G19480,AT5G51720,AT5G02160,AT1G31330,AT2G23670,AT4G02770,AT4G23890,AT5G19940,AT5G19220,AT5G35790,AT1G79790,AT4G33666,AT5G04490,AT5G04140,AT1G74730,AT1G30380,AT1G49750,AT5G54770,AT3G54900,AT1G22630,AT3G02730,AT1G42970,AT1G14150,AT1G51110,AT2G43560,AT3G48420,AT1G67740,AT1G68010,AT1G15980,AT3G14930,AT4G09010,AT1G29700,AT3G25760,AT1G60000,AT3G01480,AT2G47450,AT1G09340,AT4G10340,AT3G56040,AT5G12860,AT1G07700,AT2G21960,AT4G25910,AT3G01440,AT2G42690,AT4G13500,AT5G27290,AT4G25080,AT1G03310,AT2G06520,AT3G10060,AT2G05620,AT1G45474,AT1G18730,AT1G49975,AT2G17972,AT1G77490,AT1G20020,AT2G01590,AT2G26500,AT5G59250,AT2G46820,AT4G35250,AT4G33470,AT4G15510,AT3G26650,AT3G16250,AT4G25050,AT5G35170,AT3G25690,AT5G66190,AT1G20340,AT2G36145,AT2G29630,AT4G38970,AT3G26740,AT1G26220,AT1G34000,AT5G48790,AT4G04640,AT3G55330,AT3G27925,AT5G58260,AT5G44520,AT5G57040,AT4G18480,AT2G41680,AT5G37360,AT3G02690,AT1G69523,AT4G24930,AT4G01690,AT5G45930,AT1G56500,AT4G13220,AT2G40490,AT1G70610,AT4G28030,AT4G02530,AT1G54780,AT4G32260,AT4G21210,AT5G02760,AT1G54820,AT1G14700,AT1G33600,AT1G24530,AT4G22730,AT1G66970,AT4G11460,AT1G51805,AT4G34220,AT1G35290,AT5G40170,AT1G80640,AT1G63880,AT2G43550,AT4G00750,AT3G62550,AT3G14210,AT3G56080,AT1G18020,AT2G43530,AT2G43520,AT4G23680,AT4G37150,AT1G54050,AT4G16990,AT1G24020,AT1G06460,AT5G44870,AT1G68190,AT4G14540,AT1G30260,AT1G12860,AT5G46690,AT2G31070,AT4G17810,AT2G40670,AT1G68520,AT1G29660,AT4G00950,AT1G76110,AT4G18740,AT1G22590,AT3G11090,AT1G49010,AT3G61310,AT1G53230,AT4G31805,AT4G34590,AT2G45850,AT1G70760,AT2G13610,AT5G27360,AT2G38540,AT5G61520,AT5G46110,AT3G21260,AT5G55450,AT3G26570,AT5G01240,AT1G67400,AT3G10520,AT1G05200,AT3G59340,AT1G69160,AT1G11850,AT1G23130,AT4G10060,AT1G78995,AT3G19800,AT2G44210,AT3G06470,AT1G65900,AT3G01060,AT1G08180,AT5G22390,AT4G37080,AT3G19030,AT4G28080,AT3G48200,AT5G53880,AT3G47250,AT3G48720,AT3G14760,AT5G16030,AT5G38980,AT1G04800,AT1G15260,AT5G25840,AT2G21185,AT2G40020,AT5G01015,AT5G11070,AT3G50685,AT2G32100,AT5G41050,AT1G23390,AT2G34510,AT1G64720,AT1G34245,AT5G44580,AT3G06080,AT2G42190,AT3G23080,AT4G02920,AT3G16660,AT5G20935,AT2G30010,AT1G50730 LEIVAR_SSTF-C5_WT-R1-WT-RC-PIFQ-D/WT-D_UP Induced SSTF Class 5 genes that are Induced in WT-R1, WT-Rc and/or pifq-D relative to WT-D. (Dataset3 PubmedID:19920208) AT1G06570,AT3G17510,AT1G01060,AT3G13040,AT1G66760,AT3G55130,AT3G12320,AT5G06980,AT3G45210 LEIVAR_SSTF-C6_WT-R1-WT-RC-PIFQ-D/WT-D_UP Induced SSTF Class 6 genes that are Induced in WT-R1, WT-Rc and/or pifq-D relative to WT-D. (Dataset3 PubmedID:19920208) AT1G60270,AT1G48100,AT4G18010,AT3G51240,AT2G43910,AT1G64500,AT1G72500,AT5G13930,AT4G11570,AT1G12370,AT5G05270,AT2G31750,AT5G48880,AT5G17050,AT2G37970,AT3G19450,AT2G25530,AT2G41660,AT5G23730,AT5G11110,AT1G06000,AT3G57020,AT5G20220,AT4G28680,AT3G02910,AT1G59700,AT1G17100,AT2G16430,AT3G24190,AT5G40390,AT1G17050,AT1G10370,AT4G36530,AT2G38230,AT4G29590,AT1G13930,AT5G10470,AT1G62180,AT2G30950,AT1G79510,AT4G13010,AT1G50250,AT1G50020,AT3G44720,AT1G06430,AT4G28740,AT2G46340,AT5G52250,AT2G40080,AT4G37760,AT3G22840,AT2G15970,AT5G15960,AT4G26850,AT3G50970,AT3G61220,AT5G52310,AT1G78290,AT3G05800,AT3G21890,AT1G78600,AT5G24120,AT1G43160,AT4G27410,AT2G47460,AT3G17609,AT1G67030,AT1G70000,AT5G25890,AT5G25810,AT3G54990,AT5G02270,AT3G21670,AT5G59730,AT5G44110,AT5G67370,AT3G47430,AT3G52740,AT1G67360,AT5G64170,AT2G24540,AT5G42760 LEIVAR_SSTF-C7_WT-R1-WT-RC-PIFQ-D/WT-D_UP Induced SSTF Class 7 genes that are Induced in WT-R1, WT-Rc and/or pifq-D relative to WT-D. (Dataset3 PubmedID:19920208) AT5G47610,AT1G23310,AT1G37130,AT4G37410,AT3G55120,AT3G21760,AT1G72030,AT5G47040,AT4G04840,AT4G39510,AT2G03750,AT1G75100,AT4G12320,AT5G08640,AT1G65060,AT1G30530,AT5G53970,AT4G37800,AT1G60590,AT1G69530,AT4G37470,AT3G21870,AT2G32540,AT1G26770,AT4G38840,AT2G21220,AT2G05070,AT5G54270,AT5G13630,AT3G17040,AT1G14345,AT2G35260,AT5G64940,AT5G08050,AT4G04850,AT5G52570,AT1G53670,AT1G52870,AT1G44446,AT5G13770,AT2G29650,AT5G17230,AT3G27690,AT2G34430,AT3G54890,AT5G35970,AT1G76080,AT1G58290,AT3G08940,AT3G59400,AT2G13360,AT4G27700,AT3G15850,AT1G64860,AT3G29240,AT1G16720,AT3G62410,AT1G68830,AT4G15560,AT3G52540,AT5G67030,AT2G40400,AT2G30520,AT5G24850,AT2G01890,AT5G58140,AT1G78820,AT1G18810,AT1G07010,AT5G36910,AT1G31580,AT2G46450,AT1G19670,AT3G02380,AT3G61890,AT2G46830,AT3G47500,AT2G21320,AT2G34620,AT4G00480,AT5G17300,AT3G09600,AT2G31380,AT5G15310,AT3G02830,AT5G15850,AT4G34610,AT1G06040,AT2G39250,AT5G44190,AT1G18330,AT5G48490,AT5G06530,AT5G64840,AT5G48485,AT5G03555,AT3G14770,AT5G64770,AT3G54500,AT5G64850,AT1G15290,AT3G48350,AT2G37380,AT5G57345,AT4G27520,AT5G55620,AT4G15620,AT4G24700,AT1G44000,AT5G56850,AT4G33660,AT5G26820,AT4G27030,AT1G54740,AT3G56290 LEIVAR_SSTF-C1_WT-R1-WT-RC-PIFQ-D/WT-D_DN Repressed SSTF Class 1 genes that are Repressed in WT-R1, WT-Rc and/or pifq-D relative to WT-D. (Dataset4 PubmedID:19920208) AT3G29250,AT5G57240,AT5G55170,AT1G19540,AT5G62860,AT3G24715,AT3G11340,AT2G44380,AT5G55550,AT4G10150,AT1G62770,AT4G20260,AT3G63470,AT1G01120,AT2G02930,AT1G66690,AT5G20550,AT1G17430,AT1G66800,AT4G37890,AT5G47240,AT3G54120,AT4G14010,AT3G13610,AT1G05170,AT4G18360,AT5G48900,AT1G76090,AT4G16500,AT1G07740,AT2G41850,AT2G38610,AT4G32070,AT4G17730,AT1G02660,AT2G01530,AT3G02620,AT2G22860,AT3G16690,AT2G05540,AT3G45300,AT2G28110,AT3G62860,AT1G12780,AT3G05900,AT1G65970,AT2G33990,AT1G29510,AT3G55310,AT1G72070,AT4G38540,AT1G22500,AT3G50660,AT1G50560,AT5G24410,AT5G44440,AT1G72200,AT4G30140,AT4G36380,AT1G42470,AT5G11540,AT5G23750,AT1G31070,AT5G63600,AT4G19670,AT3G57510,AT1G14890,AT2G35710,AT5G63030,AT2G02390,AT3G20130,AT3G60140,AT2G42990,AT1G30720,AT5G63590,AT1G27130,AT5G44020,AT1G70810,AT5G59490,AT1G17170,AT4G01950,AT3G43430,AT1G29020,AT2G29730,AT2G32300,AT2G34500,AT5G40760,AT3G09300,AT5G24090,AT5G02230,AT1G07750,AT1G47480,AT5G16450,AT1G62800,AT2G41740,AT5G48450,AT3G59690,AT2G22680,AT1G17060,AT5G57480,AT3G13760,AT2G39400,AT2G43590,AT1G13430,AT3G23560,AT4G17220,AT5G40590,AT5G41900,AT3G07990,AT4G16770,AT5G28020,AT4G13180,AT5G07110,AT1G21100,AT5G23870,AT5G25460,AT1G11545,AT1G32170,AT2G21140,AT4G33220,AT2G22970,AT4G34970,AT1G75750,AT2G43050,AT3G45970,AT5G65430,AT5G44380,AT5G07830,AT4G16260,AT5G42180,AT4G25810,AT3G28180,AT1G65310,AT3G03830,AT5G59530,AT2G18010,AT1G29500,AT3G03840,AT1G29450,AT4G34760,AT1G29460,AT1G29490,AT5G40450,AT5G05460,AT5G14780,AT5G02020,AT5G22580,AT1G15350,AT2G41180,AT1G14370,AT2G37760,AT3G61430,AT5G42590,AT5G20410,AT4G35770,AT1G61590,AT4G19880,AT2G30930,AT1G69526,AT3G12610,AT1G10070,AT2G30360,AT3G59350,AT2G17290,AT2G21880,AT1G26270,AT5G66210,AT2G39180,AT5G25440,AT4G17170,AT5G41260,AT4G05200,AT5G61570,AT5G65530,AT4G02410,AT5G03530,AT1G34110,AT3G55950,AT2G31680,AT5G25110,AT5G59010,AT3G20340,AT1G54100,AT3G01190,AT1G01620,AT3G28740,AT4G40010,AT1G62480,AT1G11000,AT5G61900,AT2G42010,AT3G49120,AT1G78000,AT3G03270,AT4G33420,AT2G23620,AT3G12500,AT5G44920,AT1G49570,AT2G37130,AT1G52200,AT5G39580,AT1G07720,AT5G12250,AT4G30170,AT4G23690,AT5G59780,AT4G01680,AT3G23030,AT1G52830,AT1G04240,AT4G30410,AT1G14350,AT2G35210,AT3G23050,AT1G69570,AT4G17695,AT3G50260,AT1G74650,AT5G26660,AT1G10480,AT1G26960,AT3G28910,AT5G50915,AT5G47450,AT4G17340,AT1G73640,AT5G35200,AT2G28260,AT4G23400,AT3G24450,AT3G16180,AT5G04770,AT3G48970,AT4G12550,AT3G51890,AT1G32450,AT4G35060,AT1G72150,AT2G21540,AT1G17700,AT1G16370,AT2G47160,AT5G02170,AT1G22740,AT4G29900,AT1G22530,AT3G05920,AT5G40780,AT3G05150,AT4G23030,AT2G01770,AT5G46900,AT4G22610,AT5G23840,AT1G19530,AT1G10140,AT3G29370,AT2G34070,AT1G72790,AT5G18970,AT5G49800,AT4G33750,AT5G61660,AT1G44800,AT2G39210,AT5G66650,AT5G61820,AT5G45500,AT1G69840,AT5G15580,AT3G60520,AT2G39980,AT2G39430,AT4G35070,AT5G44670,AT1G27670,AT1G19380,AT1G02700,AT5G23830,AT4G16515,AT5G09440,AT1G03870,AT1G53180,AT2G27830,AT2G36410,AT1G33055,AT1G61160,AT4G15390,AT3G54260,AT4G39675,AT1G15670,AT4G37010,AT1G01640,AT1G10740,AT4G09890,AT3G18200,AT2G36220,AT4G32350,AT2G30990,AT5G23460,AT2G35270,AT1G09575,AT4G15610,AT1G61667,AT5G10580,AT4G23870,AT3G47210,AT2G17550,AT4G35320,AT4G14380,AT1G61260,AT2G23810,AT5G56540,AT5G63820,AT2G28670,AT1G30750,AT2G36100,AT4G12730,AT3G54200,AT1G19020,AT4G27450,AT4G17350,AT3G02240,AT1G12080,AT3G11550,AT5G15290,AT1G71740,AT2G39530,AT5G22555,AT3G22231,AT1G63220,AT4G02090,AT5G53250,AT2G27370,AT1G08030,AT2G32280,AT1G17620,AT1G29050,AT4G13580 LEIVAR_SSTF-C2_WT-R1-WT-RC-PIFQ-D/WT-D_DN Repressed SSTF Class 2 genes that are Repressed in WT-R1, WT-Rc and/or pifq-D relative to WT-D. (Dataset4 PubmedID:19920208) AT5G39320,AT5G13870,AT5G26670,AT3G47540,AT2G22900,AT4G29700,AT3G10410,AT4G30670,AT4G31500,AT2G23640,AT2G24170,AT1G63000,AT5G22740,AT1G76790,AT5G17330,AT1G78340,AT5G57110,AT5G66690,AT5G51060,AT5G66280,AT5G23530,AT3G49360,AT1G56300,AT4G02330,AT4G01700,AT5G38940,AT5G63800,AT5G15490,AT4G28850,AT1G62980,AT3G23480,AT2G32610,AT5G04960,AT4G25820,AT5G57530,AT1G15550,AT1G48660,AT1G79530,AT2G21660,AT5G39410,AT5G64300,AT1G74490,AT5G10720,AT4G25390,AT3G17420,AT3G46280,AT1G35720,AT1G34510,AT4G26010,AT4G30650,AT1G20450,AT1G01470,AT4G20830,AT2G21620,AT1G21520,AT4G37530,AT3G53990,AT2G43510,AT1G31850,AT2G34300,AT1G08830,AT5G11150,AT4G19120,AT3G49930,AT5G59570,AT2G22840,AT3G03450,AT1G02220,AT3G20810,AT2G20180,AT1G09530,AT1G52280,AT5G17850,AT2G23150,AT4G34580,AT4G25220,AT5G01870,AT2G20515,AT4G40090,AT5G46230,AT1G12845,AT3G17680,AT1G53035,AT5G55960,AT3G54040,AT2G46140,AT4G23885,AT2G18690,AT5G38550,AT3G57780,AT2G07000,AT4G02270,AT4G39840,AT3G06035 LEIVAR_SSTF-C3_WT-R1-WT-RC-PIFQ-D/WT-D_DN Repressed SSTF Class 3 genes that are Repressed in WT-R1, WT-Rc and/or pifq-D relative to WT-D. (Dataset4 PubmedID:19920208) AT1G52250,AT1G69040,AT5G19120,AT1G13250,AT3G12920,AT3G52290,AT4G13830,AT4G03510,AT5G25350,AT2G26710,AT3G16490,AT5G22920,AT5G23350,AT4G37770,AT3G15630,AT2G22330,AT1G67910,AT5G61440,AT2G39705,AT4G17615,AT1G51940,AT4G28240,AT5G39860,AT5G25190,AT1G75540,AT5G28300,AT1G14920,AT2G45050,AT2G25900,AT4G01250,AT5G61590,AT3G60530,AT1G73830,AT1G25560,AT2G18300,AT3G60390,AT3G16500,AT1G77210,AT5G50335,AT5G08350,AT5G07000,AT3G53800,AT3G10985,AT5G53420,AT1G77870 LEIVAR_SSTF-C4_WT-R1-WT-RC-PIFQ-D/WT-D_DN Repressed SSTF Class 4 genes that are Repressed in WT-R1, WT-Rc and/or pifq-D relative to WT-D. (Dataset4 PubmedID:19920208) AT4G26940,AT1G63380,AT1G62710,AT5G14180,AT3G54510,AT1G72100,AT4G25250,AT5G37970,AT2G36640,AT1G65920,AT3G48460,AT1G75900,AT4G29270,AT5G22470,AT1G02800,AT1G02205,AT2G28490,AT1G72290,AT4G10020,AT3G17520,AT3G56350,AT3G05260,AT3G54940,AT5G44120,AT2G47000,AT2G32990,AT4G30290,AT1G64660,AT3G53040,AT1G03880,AT4G25260,AT2G28420,AT5G04120,AT2G42790,AT4G21020,AT5G01300,AT2G33380,AT5G42890,AT5G07460,AT2G44790,AT2G29420,AT1G30620,AT4G21850,AT3G52450,AT3G04010,AT3G53230,AT4G22770,AT5G24910,AT5G38010,AT5G43520,AT1G06080,AT1G04220,AT1G01600,AT5G11920,AT5G03860,AT1G65340,AT3G54770,AT1G08500,AT3G06860,AT3G29410,AT5G23220,AT1G60090,AT2G24300,AT4G26740,AT1G64640,AT1G75780,AT3G23800,AT4G02290,AT3G48940,AT3G21370,AT5G39110,AT4G13210,AT5G64120,AT4G29690,AT2G29440,AT2G28630,AT1G64110,AT2G23240,AT5G40420,AT5G50700,AT4G28520,AT1G53830,AT5G45280,AT5G63810,AT5G57550,AT4G30280,AT5G44130,AT3G43270,AT4G38400,AT1G45130,AT5G66920,AT1G02810,AT5G20710,AT1G53080,AT1G20190,AT3G20470,AT4G32460,AT5G07030,AT1G75830,AT3G22640,AT2G45210,AT5G18060,AT2G14900,AT4G34770,AT3G25290,AT5G14920,AT1G77330,AT1G15210,AT5G02260,AT1G70710,AT1G54870,AT1G76240,AT1G07420,AT5G01670,AT2G22780,AT1G68560,AT3G50770,AT5G51670,AT5G54190,AT5G22500,AT1G29195,AT4G24150,AT5G66080,AT3G55940,AT2G19660,AT5G12940,AT5G37790,AT5G16590,AT1G61840,AT5G28080,AT4G11290,AT3G58450,AT1G02930,AT3G50980,AT1G16850,AT1G14950,AT2G47180,AT4G11190,AT4G25140,AT1G48130,AT2G38905,AT5G66390,AT1G05260,AT2G18050,AT1G70880,AT4G11650,AT1G70840,AT2G02120,AT4G21830,AT1G14930,AT5G12030,AT2G15010,AT2G21490,AT5G66400,AT1G04250,AT2G43060,AT3G01220,AT5G15150,AT1G03790,AT2G41070,AT1G77950,AT1G75390,AT1G18400,AT1G02340,AT1G20900,AT3G63350,AT1G67100,AT1G53690,AT1G19510,AT3G21090,AT5G24580,AT4G29140,AT4G22460,AT5G54740,AT1G72470,AT4G27160,AT3G51895,AT5G10180,AT4G27150,AT4G23700,AT4G16160,AT4G22490,AT1G27770,AT5G60660,AT4G12510,AT1G73190,AT1G17810,AT5G11000,AT4G01410,AT4G16442,AT1G70990,AT4G30060,AT1G07090,AT2G42610,AT1G06980,AT2G38465,AT5G60760,AT4G31830,AT5G45690,AT5G66780,AT2G21820,AT2G35300,AT2G41260,AT4G01140,AT3G51410,AT1G27990,AT1G16730,AT1G52690,AT2G25890,AT1G27461,AT2G22470,AT5G51210,AT1G32560,AT1G04560,AT2G40170,AT3G03170,AT1G15330,AT3G50900,AT3G22500,AT1G54860,AT5G62490,AT2G41280,AT5G66590,AT2G47780,AT3G29575,AT5G06200,AT2G28400,AT3G44510,AT3G23090,AT2G38500,AT1G68250,AT5G45310,AT5G10430,AT1G76640,AT5G28630,AT3G19920,AT2G33070,AT4G11020,AT4G26320,AT3G59370,AT3G12960,AT2G34700,AT5G42860,AT1G65090,AT3G15670,AT2G47770,AT2G23110,AT5G07330,AT4G09610,AT3G27660,AT1G05510,AT4G09600,AT3G51810,AT3G01570 LEIVAR_SSTF-C5_WT-R1-WT-RC-PIFQ-D/WT-D_DN Repressed SSTF Class 5 genes that are Repressed in WT-R1, WT-Rc and/or pifq-D relative to WT-D. (Dataset4 PubmedID:19920208) AT4G39070 LEIVAR_SSTF-C6_WT-R1-WT-RC-PIFQ-D/WT-D_DN Repressed SSTF Class 6 genes that are Repressed in WT-R1, WT-Rc and/or pifq-D relative to WT-D. (Dataset4 PubmedID:19920208) AT1G63140,AT1G15040,AT4G37580,AT2G04500,AT4G08950,AT1G29440,AT2G21200,AT4G25420,AT1G18290,AT3G23150,AT2G40000,AT4G10270,AT2G42870,AT3G02550,AT3G53200,AT1G13260,AT2G46990,AT2G44910,AT5G44260,AT3G56400,AT2G44080,AT3G59900,AT5G60680,AT5G15120,AT5G62280,AT3G42800,AT5G67390,AT5G67020,AT2G41640 LEIVAR_SSTF-C7_WT-R1-WT-RC-PIFQ-D/WT-D_DN Repressed SSTF Class 7 genes that are Repressed in WT-R1, WT-Rc and/or pifq-D relative to WT-D. (Dataset4 PubmedID:19920208) AT2G21910,AT2G34020,AT4G11050,AT2G32430,AT5G44460,AT2G26440,AT3G28340,AT4G11610,AT5G02540,AT5G01320,AT1G10550,AT4G14130,AT4G13790,AT3G14370,AT1G75450,AT1G53700,AT5G65800,AT4G36110,AT1G34630,AT5G01790,AT5G02200,AT2G31980,AT5G63650,AT4G36010,AT4G38580,AT2G37678,AT1G06850,AT1G69690,AT5G15830,AT1G77200,AT4G37740,AT5G53980,AT3G12820,AT3G15540,AT3G61830,AT4G32280,AT4G16780,AT3G62090,AT1G18570,AT1G44830,AT3G25730,AT4G10240,AT5G53660,AT2G39350,AT1G01200,AT1G28330,AT5G57760,AT5G07010,AT1G70270,AT5G02580,AT1G26290,AT3G18530,AT1G60060,AT4G14465,AT4G16670,AT4G35720 ZHENG_AGL15_AGL15-AGL18/COL-OR-COL/35S-AGL15_DIFF Expressed Genes by AGL15 defined as a two-fold change and P<0.01 for at least one comparison (agl15 agl18/Col or Col/35S:AGL15) and a consistent or no change for the other comparison (Dataset 3 PubmedID:19767455) AT1G02860,AT1G03620,AT1G04030,AT1G05070,AT1G05580,AT1G06120,AT1G08430,AT1G10460,AT1G11000,AT1G12780,AT1G13450,AT1G13930,AT1G14240,AT1G17180,AT1G19220,AT1G20850,AT1G21560,AT1G23000,AT1G23160,AT1G23460,AT1G25550,AT1G26260,AT1G26680,AT1G27150,AT1G29090,AT1G29660,AT1G30070,AT1G43790,AT1G44900,AT1G45180,AT1G47410,AT1G47540,AT1G47600,AT1G49320,AT1G53320,AT1G53860,AT1G56090,AT1G56280,AT1G60010,AT1G62480,AT1G65570,AT1G65810,AT1G68320,AT1G68670,AT1G68880,AT1G69010,AT1G69040,AT1G70210,AT1G70500,AT1G70830,AT1G70850,AT1G71380,AT1G72850,AT1G73640,AT1G75190,AT1G78110,AT1G78430,AT1G80920,AT2G02820,AT2G03470,AT2G16270,AT2G18040,AT2G18060,AT2G18360,AT2G20240,AT2G23700,AT2G23960,AT2G26700,AT2G29480,AT2G29890,AT2G31270,AT2G31980,AT2G32430,AT2G35530,AT2G40480,AT2G43590,AT2G46590,AT2G46690,AT2G46710,AT2G46990,AT3G03640,AT3G04320,AT3G04630,AT3G04730,AT3G09730,AT3G09980,AT3G10740,AT3G10880,AT3G16440,AT3G17990,AT3G18035,AT3G18960,AT3G21550,AT3G21680,AT3G22930,AT3G25710,AT3G25790,AT3G45090,AT3G48210,AT3G48580,AT3G52290,AT3G54190,AT3G54820,AT3G56230,AT3G62100,AT4G00680,AT4G01280,AT4G02160,AT4G02170,AT4G02210,AT4G02800,AT4G03210,AT4G05520,AT4G10350,AT4G13980,AT4G14200,AT4G17010,AT4G17350,AT4G17720,AT4G18340,AT4G20230,AT4G21650,AT4G21820,AT4G24670,AT4G27590,AT4G28400,AT4G28520,AT4G29270,AT4G29690,AT4G30090,AT4G31100,AT4G31320,AT4G31800,AT4G34160,AT4G35070,AT4G35350,AT4G36160,AT4G36700,AT4G36880,AT4G37110,AT4G38620,AT5G01260,AT5G01610,AT5G02370,AT5G02540,AT5G03510,AT5G04110,AT5G05290,AT5G08370,AT5G08590,AT5G12030,AT5G13790,AT5G19340,AT5G19530,AT5G20150,AT5G22430,AT5G23780,AT5G24490,AT5G25110,AT5G25180,AT5G25210,AT5G25580,AT5G27390,AT5G27410,AT5G27740,AT5G35790,AT5G37260,AT5G38700,AT5G39730,AT5G39820,AT5G40020,AT5G40270,AT5G40550,AT5G40840,AT5G41220,AT5G42630,AT5G44120,AT5G44560,AT5G46020,AT5G46910,AT5G47920,AT5G48460,AT5G48560,AT5G48800,AT5G49400,AT5G49870,AT5G50130,AT5G50180,AT5G51520,AT5G51600,AT5G51850,AT5G54850,AT5G56540,AT5G57630,AT5G60760,AT5G60950,AT5G61580,AT5G63650,AT5G64160,AT5G64340,AT5G64760,AT5G65210,AT5G65910,AT5G66300,AT5G67270 ZHENG_AGL15_AGL15-AGL18/COL-OR-COL/35S-AGL15_DN Repressed Genes by AGL15 defined as a two-fold change and P<0.01 for at least one comparison (agl15 agl18/Col; or Col/35S:AGL15) and a consistent or no change for the other comparison (Dataset 3 PubmedID:19767455) AT1G02470,AT1G07090,AT1G07180,AT1G07750,AT1G09750,AT1G11545,AT1G11700,AT1G12090,AT1G12100,AT1G12845,AT1G15580,AT1G16370,AT1G16510,AT1G16850,AT1G17620,AT1G19960,AT1G20900,AT1G21670,AT1G22500,AT1G23090,AT1G23205,AT1G23800,AT1G24260,AT1G24530,AT1G27480,AT1G28390,AT1G30100,AT1G30750,AT1G31290,AT1G31580,AT1G33250,AT1G35230,AT1G35350,AT1G48070,AT1G49470,AT1G52140,AT1G52700,AT1G52880,AT1G54570,AT1G59930,AT1G60030,AT1G61800,AT1G62560,AT1G63530,AT1G64900,AT1G65310,AT1G65490,AT1G65500,AT1G66200,AT1G66970,AT1G69870,AT1G70230,AT1G70990,AT1G71400,AT1G71880,AT1G75620,AT1G75880,AT1G76130,AT1G76500,AT1G76930,AT1G77640,AT1G79410,AT1G79720,AT1G80450,AT1G80530,AT1G80760,AT2G01290,AT2G02130,AT2G03020,AT2G03980,AT2G04780,AT2G07718,AT2G16570,AT2G16660,AT2G21210,AT2G22550,AT2G23130,AT2G23170,AT2G25510,AT2G25620,AT2G26740,AT2G28120,AT2G28670,AT2G30080,AT2G32210,AT2G32300,AT2G33050,AT2G33860,AT2G35860,AT2G36570,AT2G36830,AT2G37040,AT2G37770,AT2G39010,AT2G39210,AT2G39710,AT2G41800,AT2G42360,AT2G42610,AT2G43100,AT2G43780,AT2G47560,AT2G47840,AT2G47930,AT2G48130,AT2G48140,AT3G01930,AT3G03050,AT3G04000,AT3G05180,AT3G05360,AT3G06150,AT3G06470,AT3G06810,AT3G07270,AT3G07390,AT3G14210,AT3G14560,AT3G15650,AT3G15840,AT3G19550,AT3G19710,AT3G20100,AT3G22120,AT3G22240,AT3G25760,AT3G26280,AT3G28040,AT3G44860,AT3G47670,AT3G48690,AT3G48700,AT3G50340,AT3G51420,AT3G51860,AT3G54400,AT3G57260,AT3G58990,AT3G60420,AT3G60490,AT3G60690,AT3G60900,AT3G63160,AT4G00360,AT4G00390,AT4G02410,AT4G04540,AT4G08870,AT4G09500,AT4G10130,AT4G12310,AT4G12470,AT4G12480,AT4G12490,AT4G12500,AT4G12730,AT4G13340,AT4G13510,AT4G15490,AT4G16985,AT4G21680,AT4G21830,AT4G22460,AT4G22470,AT4G23600,AT4G23900,AT4G24120,AT4G24130,AT4G25640,AT4G26220,AT4G29140,AT4G29240,AT4G30420,AT4G30430,AT4G33420,AT4G33550,AT4G36430,AT4G36710,AT4G37310,AT4G37320,AT4G37450,AT4G37980,AT4G38080,AT4G38250,AT5G01840,AT5G03555,AT5G04120,AT5G04950,AT5G05340,AT5G05600,AT5G06870,AT5G07010,AT5G08000,AT5G09730,AT5G09970,AT5G10020,AT5G10180,AT5G10380,AT5G10580,AT5G11730,AT5G12170,AT5G13100,AT5G13890,AT5G14120,AT5G14180,AT5G16010,AT5G16970,AT5G17340,AT5G19260,AT5G19820,AT5G21105,AT5G22250,AT5G22270,AT5G26270,AT5G28430,AT5G35160,AT5G36160,AT5G38990,AT5G39760,AT5G40170,AT5G41400,AT5G43380,AT5G44130,AT5G45800,AT5G46050,AT5G46330,AT5G47560,AT5G48930,AT5G50570,AT5G50710,AT5G50720,AT5G50800,AT5G52450,AT5G53370,AT5G53870,AT5G55930,AT5G58860,AT5G59060,AT5G61160,AT5G61520,AT5G61890,AT5G63690,AT5G65320,AT5G65380 HSIEH_PI-DEFICIENCY_UP Up- regulated-the target genes with altered expression by Pi deficiency (Table 1 PubmedID:19854858) AT3G05690,AT5G06510,AT5G43780,AT5G10180,AT3G27150,AT1G56650,AT1G66370,AT1G66390 HSIEH_PI-DEFICIENCY_DN Down- regulated-the target genes with altered expression by Pi deficiency (Table 1 PubmedID:19854858) AT2G33810,AT2G42200,AT2G33770,AT2G35160,AT1G02860 LEGNAIOLI_TOC1-OX/WT_UP Increased genes in TOC1-ox compared with WT (Table S1 PubmedID:19816401) AT4G15210,AT3G60140,AT5G61380,AT4G33720,AT1G43800,AT5G20230,AT5G07990,AT1G03495,AT4G24890,AT1G02940,AT4G14090,AT5G14650,AT5G54060,AT3G59930,AT2G40100,AT4G33560,AT4G01630,AT3G29590,AT5G09470,AT1G65500,AT1G17710,AT5G09570,AT5G08030,AT2G19970,AT1G43910,AT3G19550,AT1G73010,AT1G27730,AT5G64000,AT3G15310,AT5G42800,AT2G36750,AT2G47520,AT3G10150,AT5G58770,AT1G76650,AT2G39330,AT1G65060,AT2G19990,AT1G62580,AT5G41080,AT4G22870,AT5G48880,AT1G06000,AT5G24150,AT5G46050,AT1G23140,AT3G02550,AT5G51720,AT1G29720,AT1G69880,AT5G20410,AT3G15650,AT1G77120,AT3G51240,AT3G16330,AT1G09240,AT1G19200,AT1G05680,AT1G30040,AT4G02330,AT3G10040,AT2G04032,AT3G59140,AT2G16060,AT3G29810,AT2G45220,AT2G17280,AT5G15120,AT3G21560,AT2G29670,AT2G03020,AT5G05270,AT5G59490,AT2G29350,AT1G02920,AT1G65490,AT3G04000,AT3G10450,AT1G71330,AT4G08770,AT1G01060,AT1G76190,AT5G52320,AT5G10130,AT5G24160,AT1G50110,AT5G49330,AT2G23910,AT5G01840,AT3G59010,AT3G27220,AT5G15070,AT2G32190,AT5G13930,AT1G09500,AT2G25000,AT5G20400,AT5G51500,AT5G49520,AT5G63580,AT4G17970,AT2G45210,AT1G75388,AT5G38710,AT3G60160,AT1G17420,AT5G55930,AT4G21680,AT4G21990,AT3G17998,AT5G50200,AT5G51850,AT3G27170,AT1G61380,AT1G28600,AT5G17050,AT4G14680,AT1G72920,AT2G23560,AT4G10120,AT5G02190,AT5G20830,AT3G14850,AT1G65840,AT4G15490,AT1G74710,AT5G67400,AT5G44110,AT4G23600,AT5G08640,AT4G11890,AT1G21460,AT1G69870,AT5G35970,AT3G23295,AT5G44190,AT2G28690,AT3G52190,AT4G27280,AT2G41010,AT3G13650,AT3G12700,AT3G23290,AT4G17840,AT2G31160,AT3G44990,AT1G72900,AT5G33290,AT5G52810,AT1G73260,AT1G64900,AT3G55120,AT1G06550,AT2G31750,AT4G08850,AT1G48320,AT1G64405,AT3G49360,AT3G22540,AT5G45650,AT4G38950,AT1G22150,AT1G12320,AT1G19450,AT1G02520,AT3G50480,AT3G13760,AT4G33030,AT3G08940,AT5G06320,AT5G54960,AT5G43980,AT1G74000,AT3G49110,AT3G26690,AT1G33811,AT5G43060,AT3G61220,AT1G22400,AT4G34580,AT4G27970,AT2G19880,AT2G19570,AT2G30490,AT5G67300,AT3G56040,AT1G17170,AT5G64870,AT3G44720,AT3G51330,AT2G23960,AT3G19000,AT4G14030,AT4G23190,AT5G38530,AT2G31730,AT4G14010,AT1G22410,AT3G04640,AT5G64100,AT1G58370,AT5G60300,AT1G24020,AT3G51090,AT4G36010,AT3G63300,AT1G51070,AT1G06420,AT3G06500,AT2G43018,AT3G16520,AT2G34070,AT1G25450,AT2G19110,AT2G41640,AT4G24130,AT1G80360,AT5G49890,AT1G36940,AT5G07830,AT3G03300,AT2G25820,AT3G55520,AT4G34050,AT2G26530,AT2G04650,AT2G05260,AT2G04450,AT5G51190,AT4G37310,AT3G55980,AT1G09780,AT5G18630,AT2G26080,AT1G79720,AT4G37870,AT5G58870,AT1G51890,AT5G52560,AT4G17230,AT1G12140,AT3G27380,AT2G29630,AT2G39110 LEGNAIOLI_TOC1-OX/WT_DN Decreased genes in TOC1-ox compared with WT (Table S1 PubmedID:19816401) AT1G27690,AT3G48750,AT1G74170,AT3G63120,AT3G62370,AT4G11960,AT5G27670,AT5G65490,AT3G29035,AT3G01690,AT2G02760,AT3G20410,AT5G58960,AT4G14270,AT1G49320,AT3G60390,AT2G44900,AT1G30690,AT1G30210,AT2G38000,AT2G45280,AT2G41890,AT3G01310,AT4G31450,AT5G19030,AT3G21650,AT5G39590,AT1G17455,AT3G04910,AT1G06390,AT1G49740,AT1G51950,AT5G40610,AT3G53950,AT1G07250,AT1G05140,AT5G05100,AT1G12580,AT5G52450,AT3G27820,AT5G22310,AT5G23920,AT1G50575,AT1G04400,AT1G55510,AT2G36490,AT2G42590,AT4G26530,AT1G68540,AT2G18280,AT5G07950,AT2G44660,AT1G48240,AT5G63810,AT3G16450,AT5G58140,AT3G25690,AT5G12440,AT4G16330,AT1G61900,AT2G30420,AT3G14690,AT1G10760,AT2G33390,AT5G43700,AT1G13640,AT2G03710,AT2G32480,AT5G16000,AT2G39400,AT3G57190,AT3G26030,AT1G68550,AT3G57040,AT1G52340,AT1G03520,AT3G48610,AT2G39010,AT1G68020,AT4G25020,AT5G57040,AT5G01075,AT5G16820,AT3G14650,AT3G62550,AT1G21130,AT3G18930,AT5G06270,AT1G12990,AT1G35612,AT3G47620,AT5G19500,AT1G62030,AT3G17930,AT3G47250,AT3G20810,AT2G46680,AT4G25910,AT4G34250,AT1G06040,AT1G28330,AT4G38690,AT2G23240,AT5G25460,AT3G16240,AT3G56080,AT1G02700,AT2G33790,AT2G37870,AT3G28007,AT2G21830,AT3G53800,AT1G25520,AT5G43840,AT4G28040,AT1G74670,AT4G34650,AT5G57345,AT5G01300,AT1G75770,AT2G25200,AT5G44310,AT2G29300,AT1G66130,AT4G32980,AT1G07430,AT4G39770,AT5G59130,AT2G36050,AT3G05640,AT1G62290,AT4G21020,AT1G02340,AT5G60100,AT1G29430,AT1G05510,AT5G42900,AT1G54040,AT2G45660,AT5G44260,AT3G01510,AT2G33830,AT3G50750,AT3G53250,AT2G29650,AT1G54870,AT3G16800,AT1G14280,AT5G47610,AT1G62510,AT5G45310,AT2G02120,AT2G25890,AT3G20210,AT2G28490,AT2G22980,AT3G17520,AT5G52300,AT3G28290,AT5G36910 LEGNAIOLI_TOC1-2_UP Upregulated in toc1-2 samples (Table S2 PubmedID:19816401) AT1G22410,AT3G16870,AT2G05070,AT2G20670,AT3G27690,AT5G06980,AT4G27310,AT1G32900,AT4G12480,AT5G54270,AT5G38910,AT2G46830,AT3G01060,AT2G21650,AT1G73870,AT5G44420,AT3G09450,AT4G12490,AT4G12470,AT3G54890,AT2G46790,AT4G31940,AT2G30810,AT2G29650,AT5G17220,AT1G73600,AT3G30210,AT5G67030,AT2G43010,AT3G30150,AT3G29970,AT1G06040,AT5G13630,AT5G43570,AT5G14760,AT4G08300,AT1G75830,AT1G09932,AT2G24915,AT5G54060,AT2G39030,AT3G30220,AT2G30770,AT2G02320,AT5G44570,AT3G29765,AT2G34610,AT1G75040,AT5G18990,AT2G30750,AT2G19050,AT3G30200,AT3G13950,AT2G28780,AT1G14880,AT4G01430,AT2G36820,AT5G64840,AT4G34150,AT3G30420,AT1G61480,AT2G46450,AT2G32680,AT2G42540,AT5G25250,AT5G01540,AT5G48540,AT1G26380,AT5G45105,AT5G22545,AT2G23270,AT1G75100,AT2G39510,AT5G20190,AT5G15725,AT4G14365,AT5G64120,AT2G46440,AT1G56060,AT4G24110,AT4G09400,AT3G30480,AT3G26830,AT4G13010,AT2G21045,AT1G13340,AT3G28580,AT2G29360,AT2G19440,AT1G80130,AT1G70610,AT5G43910,AT3G51895,AT5G28770,AT2G34430,AT3G51660,AT1G20510,AT1G74590,AT3G18250,AT1G07700,AT4G34610,AT4G24380,AT4G10040,AT5G20180,AT4G04770 LEGNAIOLI_TOC1-2_DN Downregulated in toc1-2 samples (Table S2 PubmedID:19816401) AT5G57655,AT4G29270,AT5G01520,AT2G34650,AT1G02205,AT3G61160,AT5G11070,AT1G30260,AT3G24240,AT3G09770,AT2G19810,AT4G17730,AT1G66140,AT2G22420,AT2G29630,AT2G15440,AT5G56040,AT4G12290,AT4G25250,AT2G42900,AT1G25230,AT4G11211,AT3G50440,AT1G18100,AT3G43920,AT1G61097,AT3G48510,AT2G39570,AT2G01530,AT3G53040,AT5G11550,AT4G25580,AT1G64590,AT5G57685,AT5G37260,AT5G48250,AT4G34950,AT2G16005,AT4G14270,AT5G22460,AT2G21910,AT1G47960,AT4G15440,AT4G11210,AT2G01200,AT3G12120,AT5G40420,AT3G45680,AT5G45690,AT3G60530,AT3G07650,AT4G12545,AT4G32340,AT2G23240,AT4G14096,AT1G21670,AT5G47640,AT5G45310,AT1G73190,AT2G18050,AT3G26880,AT4G09600,AT1G07050,AT2G21820,AT4G16146,AT5G59570,AT1G72100,AT2G15890,AT4G28520,AT2G40170,AT3G22640,AT3G15670,AT4G08530,AT2G19190,AT1G75870 LEGNAIOLI_ABA_TOC1-2_MISS-EXPRESSED ABA-related genes miss-expressed in toc1-2 (Table S3 PubmedID:19816401) AT3G16870,AT2G05070,AT2G20670,AT3G27690,AT5G06980,AT4G27310,AT1G32900,AT4G12480,AT5G54270,AT2G46830,AT3G01060,AT1G73870,AT4G12490,AT4G12470,AT2G46790,AT4G31940,AT2G29650,AT1G73600,AT3G30210,AT5G67030,AT1G06040,AT5G13630,AT5G43570,AT4G08300,AT2G39030,AT2G34610,AT3G13950,AT2G28780,AT5G64840,AT4G34150,AT2G46450,AT2G42540,AT5G25250,AT5G48540,AT1G26380,AT1G75100,AT2G39510,AT4G14365,AT5G64120,AT1G56060,AT4G24110,AT4G13010,AT1G13340,AT1G80130,AT3G51895,AT1G20510,AT1G74590,AT3G18250,AT1G07700,AT4G24380,AT4G04770,AT5G57655,AT5G01520,AT3G61160,AT5G11070,AT1G30260,AT3G09770,AT2G19810,AT4G17730,AT1G66140,AT2G22420,AT4G12290,AT1G25230,AT3G50440,AT1G18100,AT3G48510,AT2G39570,AT3G53040,AT4G25580,AT5G37260,AT5G48250,AT2G16005,AT5G22460,AT1G47960,AT5G45690,AT3G60530,AT3G07650,AT1G21670,AT5G47640,AT5G45310,AT2G18050,AT4G09600,AT2G21820,AT5G59570,AT2G40170,AT3G22640,AT3G15670 LEGNAIOLI_ABA_TOC1-OX_MISS-EXPRESSED ABA-related genes miss-expressed in TOC1-ox (Table S4 PubmedID:19816401) AT4G15210,AT3G60140,AT5G61380,AT1G43800,AT5G20230,AT5G07990,AT5G14650,AT5G09470,AT2G19970,AT1G43910,AT1G73010,AT1G27730,AT3G15310,AT2G36750,AT2G47520,AT3G10150,AT5G58770,AT1G76650,AT2G39330,AT1G65060,AT2G19990,AT5G41080,AT5G48880,AT1G06000,AT5G24150,AT5G46050,AT3G02550,AT5G51720,AT1G69880,AT1G77120,AT3G51240,AT3G16330,AT1G09240,AT1G19200,AT1G05680,AT1G30040,AT4G02330,AT2G04032,AT3G59140,AT3G29810,AT2G45220,AT2G17280,AT5G15120,AT2G29670,AT5G05270,AT5G59490,AT2G29350,AT1G65490,AT3G04000,AT3G10450,AT4G08770,AT1G01060,AT1G76190,AT5G24160,AT5G49330,AT2G23910,AT3G59010,AT3G27220,AT5G13930,AT1G09500,AT2G25000,AT5G49520,AT5G63580,AT2G45210,AT5G38710,AT1G17420,AT4G21680,AT4G21990,AT5G50200,AT3G27170,AT1G28600,AT5G17050,AT4G14680,AT4G10120,AT5G02190,AT5G20830,AT3G14850,AT1G65840,AT4G15490,AT1G74710,AT5G67400,AT5G44110,AT4G23600,AT5G08640,AT4G11890,AT1G21460,AT1G69870,AT5G35970,AT5G44190,AT4G27280,AT3G12700,AT3G44990,AT1G72900,AT5G33290,AT1G73260,AT1G64900,AT4G08850,AT1G48320,AT3G22540,AT5G45650,AT4G38950,AT1G19450,AT3G50480,AT3G13760,AT4G33030,AT3G08940,AT5G06320,AT5G43980,AT1G74000,AT3G26690,AT1G33811,AT5G43060,AT3G61220,AT1G22400,AT2G19880,AT2G19570,AT5G67300,AT1G17170,AT3G44720,AT3G51330,AT3G19000,AT4G23190,AT4G14010,AT3G04640,AT5G64100,AT1G58370,AT1G24020,AT3G51090,AT4G36010,AT3G06500,AT3G16520,AT2G34070,AT2G41640,AT4G24130,AT5G49890,AT2G26530,AT2G05260,AT2G04450,AT4G37310,AT3G55980,AT1G09780,AT5G18630,AT2G26080,AT4G37870,AT5G58870,AT1G51890,AT4G17230,AT2G39110,AT3G63120,AT2G02760,AT3G60390,AT2G44900,AT2G38000,AT5G39590,AT1G49740,AT1G51950,AT3G53950,AT1G05140,AT5G05100,AT5G52450,AT3G27820,AT5G23920,AT1G50575,AT1G55510,AT4G26530,AT2G18280,AT5G63810,AT5G58140,AT1G61900,AT3G14690,AT1G13640,AT2G32480,AT2G39400,AT1G03520,AT3G48610,AT1G68020,AT5G19500,AT3G17930,AT3G20810,AT2G46680,AT4G25910,AT1G06040,AT1G28330,AT5G25460,AT3G56080,AT1G02700,AT2G33790,AT2G37870,AT3G28007,AT2G21830,AT3G53800,AT5G43840,AT4G28040,AT1G74670,AT5G57345,AT5G01300,AT1G75770,AT2G29300,AT1G66130,AT4G32980,AT1G07430,AT5G59130,AT4G21020,AT5G60100,AT5G42900,AT1G54040,AT5G44260,AT3G01510,AT2G33830,AT3G50750,AT2G29650,AT1G54870,AT5G47610,AT5G45310,AT2G02120,AT3G17520,AT5G52300,AT5G36910 CHEN_OE/WT_35S-WRKY6-9-PLANT_WRKY6-1MUTANT_UP Up-regulated expression of (OE/WT) Pi-starvation responsive genes in 35S:WRKY6-9 plants and the wrky6 1 mutants (Table S2 PubmedID:19934380) AT2G45130,AT1G76430,AT3G03540,AT5G43370,AT1G73010,AT3G23430,AT2G38940,AT5G42810,AT1G22710,AT3G16785,AT1G08960,AT2G32830,AT2G02990,AT5G60410,AT4G33030,AT5G43360,AT3G47420,AT3G05630,AT5G24770,AT5G04340,AT1G20860,AT3G26570 CHEN_OE/WT_35S-WRKY6-9-PLANT_WRKY6-1MUTANT_DN Down-regulated expression of (OE/WT) Pi-starvation responsive genes in 35S:WRKY6-9 plants and the wrky6 1 mutants (Table S2 PubmedID:19934380) AT5G43340,AT3G51860,AT5G20150,AT5G13080,AT3G25710,AT2G33770,AT4G28610,AT5G01220 CHEN_KO/WT_35S-WRKY6-9-PLANT_WRKY6-1MUTANT_UP Up-regulated expression of (KO/WT) Pi-starvation responsive genes in 35S:WRKY6-9 plants and the wrky6 1 mutants (Table S2 PubmedID:19934380) AT5G01220,AT3G47420,AT4G28610,AT3G25710,AT5G20150,AT5G04340,AT5G13080,AT3G05630,AT5G24770,AT5G43340,AT3G51860 CHEN_KO/WT_35S-WRKY6-9-PLANT_WRKY6-1MUTANT_DN Down-regulated expression of (KO/WT) Pi-starvation responsive genes in 35S:WRKY6-9 plants and the wrky6 1 mutants (Table S2 PubmedID:19934380) AT5G60410,AT2G33770,AT5G42810,AT1G08960,AT3G26570,AT2G32830,AT1G20860,AT5G43360,AT1G22710,AT2G02990,AT3G23430,AT3G16785,AT4G33030,AT1G73010,AT5G43370,AT1G76430,AT3G03540,AT2G38940,AT2G45130 ZHONG_TETRAPYRROLE_WT/EIN3EIL1-MUTANT-SEEDLING_UP Up-regulated tetrapyrrole biosynthesis regulatory genes?? expression in WT and EIN3EIL1 mutant seedlings (Table S2 PubmedID:19948955) AT1G69720,AT1G44318,AT4G27440,AT1G58300,AT5G63290,AT5G54190,AT3G51820,AT5G08280,AT1G03475,AT3G48730,AT1G09940,AT5G45930,AT5G14220,AT3G09150,AT2G26550,AT1G69740,AT1G58290,AT2G40490,AT3G56940,AT3G14930,AT4G01690,AT4G05320,AT4G25080,AT1G08520 ZHONG_TETRAPYRROLE_WT/EIN3EIL1-MUTANT-SEEDLING_DN Down-regulated tetrapyrrole biosynthesis regulatory genes?? expression in WT and EIN3EIL1 mutant seedlings (Table S2 PubmedID:19948955) AT5G40850,AT3G14110,AT5G63570,AT2G30390,AT3G59400,AT5G13630,AT1G03630,AT2G26670,AT5G26030,AT4G03205,AT1G44446,AT2G31250,AT2G26540,AT4G18490 RUBIN_LBD37OX-N/WT-N_UP Up-regulated by LBD37OX -N vs. WT -N (Dataset 1 PubmedID:19933203) RPS8,RPL16.CHLOROPLAST,AFO,AT1G58420,CXE17,ERF104,AACT1,TCH4,SPCH,TCH2,AT5G22460,AT5G14650,E13L3,KCS19,GIS,XTR8,AT3G45160,LBD39,AT4G34950,AT4G29780,EXPB3,AT4G21870,TSF,CRK30,MSRB6,AT1G54926,HB33,AT2G43730,CYP71B22,AT3G09870,GSTF14,AT1G73600,CML38,CML23,AT1G29270,NRAMP6,EPF2,AT1G78460,AT1G05700,XTH32,PDF1,PP2-A5,FT,AT2G15960,AT2G28085,AT2G35290,EXPA15,AT2G22880,AT2G30020,HSPRO2 RUBIN_LBD37OX-N/WT-N_DN Down-regulated by LBD37OX -N vs. WT -N (Dataset 1 PubmedID:19933203) HRE2,SUFE2,ACD6,AT4G17670,AT4G15400,AT4G14610,AT4G14090,PAP1,DYL1,PUP1,AT1G56710,AT1G66920,AT1G73530,AT1G26290,WRKY75,UBC17,CEN2,CA2,AT5G26220,AT5G25040,ZF1,AT5G66815,DAR3,STR18,XND1,GSTU9,EXO70E2,GUS1,AT5G60800,RLK1,AT5G60280,AT5G59670,AT5G59490,AT5G59530,TIL,AT5G57610,BGAL4,OPT1,AT5G55050,ANK,UF3GT,AT5G52740,AT5G52390,AT5G50800,AT5G50260,WR3,AT5G48490,AT5G48370,ATGLR1.2,AT5G48175,AT5G46960,PTR3,AT5G45000,AT5G44580,AT5G44400,AT5G42830,DFR,AT5G42250,AT5G39670,AATP1,GER2,AT5G38910,AT5G39110,LSU2,DMR6,MTN3,AT5G23240,WRKY38,AT5G22555,AT5G22530,AILP1,AT5G18130,GSTF12,GLN1;4,AT5G15120,AT5G15180,SIG4,CWINV6,HSP17.6A,AT5G10760,IQD24,PA2,NF-YA10,AT5G05340,AT5G03350,AT5G02550,AT5G02580,AT5G02420,AT5G02230,SR1,AT3G62960,AT3G60420,AT3G60470,DIN2,PME61,AT3G58830,AT3G57950,BGL2,BG3,AT3G56620,AT3G53650,UGT73D1,PAD4,AT3G51750,AT3G51330,LBD38,LSU1,AT3G48640,AT3G48080,PS3,AT3G47540,AT3G47090,HSP17.4,CRK4,LOX2,FAR4,AT3G44620,APL3,AT4G39670,AT4G35190,AT4G33720,AT4G33666,AT4G33040,GLDP1,AT4G32950,AT4G33070,CYP82C2,GGT4,AT4G28570,AT4G28350,AT4G27900,AT4G26950,AT4G26530,CSLG3,CHX17,AT4G23610,CORI3,CRK24,CRK6,CRK7,AT4G22870,AAT1,AT4G20760,AT5G44810,RLP49,AT4G11900,OSM34,AT4G10500,TT8,AT4G05590,AT4G04750,CRK36,CRK37,AT4G10270,AT1G17960,AT1G22160,FMO1,AT1G13750,HCHIB,SCPL14,AT1G66880,RLP34,AT1G31550,AT3G28510,AT3G28540,AT3G19970,AT3G29410,CML11,BAM1,AT3G23910,AT5MAT,AT3G28580,RLP40,RLP41,MRP8,MRP7,AT3G13130,AAE16,AT3G22060,WRKY54,DMP1,AT3G24954,AT3G26510,CYP71B3,CYP71B24,AOC1,AT3G25790,AT3G29240,RLP37,AT3G29250,CYP72A14,LHCB2.3,ELIP1,AT3G16150,NAC3,LBD41,AT3G04210,AT3G04320,SCPL27,AT3G03150,AT3G08870,AIR12,GLR1.4,LNG2,PAL4,AT3G10320,CA1,AT3G07600,AT3G01190,AT3G11580,AT3G03870,GDH3,AT1G13470,AT1G15790,NIA1,AT1G64360,AT1G76350,PR5,BOR5,BZIP,KTI1,MYB90,HWI1,GSTU10,AT1G68450,GSTU11,AT2G41730,CHI,MYB2,ZIP11,NRT2.2,AT1G08050,AOX1D,AT1G78290,AT1G78410,AT1G17310,AT1G43800,PGP12,TRX5,AT1G53540,AT1G26390,NRT2.5,SBT3.5,AT1G35710,AT1G63530,AT1G49750,AT1G50090,AT1G64590,BPEP,GSTF5,AT1G78020,AT1G68620,CIPK17,AT1G64160,AT1G16260,AT1G28570,AT1G29020,CYP71B28,PCR2,G-TMT,AT1G14780,RDR1,TH7,AT1G23390,AT2G17500,NF-YA5,UGT74E2,MGDC,AT2G04070,MIPS2,AT2G21640,TAT3,FUT4,CNGC11,NUDT6,WRKY59,YLS9,MC6,BCA4,AT1G70270,AT1G12080,NRT1.1,AT1G10340,BIP3,ESL1,AT1G22890,PORC,AT1G03400,AT1G76960,AT1G03495,VSR6,NAC042,LOG1,AT2G32020,AT2G32190,AT2G32150,AT2G32160,AT2G32140,LURP1,AT2G15120,CDA1,TTG2,PNP-A,ATG8E,AT2G39050,PHT1;4,GSTU3,AT2G29290,XTH10,PR1,AT2G47880,AT2G29670,AT2G03200,AT2G47010,ABCB4,AT2G47130,AT2G29070,AT2G44970,AT2G38340,FRK1,AGP30,AT2G33850,AT2G33830,RLP23,CYP71A12,AT2G30660,AT2G30670 RUBIN_LBD38OX-N/WT-N_UP Up-regulated by LBD38OX -N vs. WT -N (Dataset 1 PubmedID:19933203) NDHG,PSBB,PSBT,RPS8,RPL22,RPL23.1,PSAA,ATPF,AFO,AT1G59265,DR4,NUDT21,AT1G58420,CXE17,HB25,PAP29,AT5G62210,AACT1,MYB34,AT5G57785,AT5G55220,SPCH,AT5G51190,PDF1.2,AT5G24570,SQP1,AT5G22460,AT5G14650,AT5G14090,E13L3,AT5G07030,KCS19,GUN4,GIS,AT3G57780,LBD38,XTR8,AT3G45160,AT3G44260,BZIP7,EXPB3,AT4G27652,AT4G27654,AT4G27657,CGA1,DIC2,BGLU47,AT4G21870,CRK30,MSRB6,AT2G40480,ATLP-1,EXPA1,HB33,CYP81D1,TPS-CIN,AT3G15310,AT3G13000,GASA5,AT3G01260,AT1G06350,AT1G73600,HB31,STZ,AT1G47400,BEE1,NRAMP6,AT1G70985,AT1G73120,EPF2,AT1G15180,GRP3S,AT1G78460,UGT75B1,AT1G05700,AT2G31730,XTH32,PDF1,PP2-A5,AT1G61740,ERD9,PUP4,FT,AT1G23205,AT2G10940,AT2G19970,EXPA15,TBL45,GH9B8,AT2G32880 RUBIN_LBD38OX-N/WT-N_DN Down-regulated by LBD38OX -N vs. WT -N (Dataset 1 PubmedID:19933203) ARD3,PLA2A,HRE2,SUFE2,ACD6,XBAT34,AT4G17670,PPDK,AT4G14610,AT4G14090,PAP1,DYL1,PUP1,AT1G56710,AT1G66920,AT1G73530,AT1G26290,WRKY75,AT1G57630,CA2,CBP60G,AT5G25260,AT5G25440,ZF1,DAR3,STR18,XND1,GSTU9,EXO70E2,AT5G60800,RLK1,AT5G60280,AT5G59670,AT5G59490,AT5G59000,AT5G57610,BGAL4,OPT1,AT5G55050,ANK,UF3GT,AT5G52740,AT5G52810,AT5G52390,AT5G50800,AT5G50260,WR3,AT5G48370,ATGLR1.2,AT5G48175,AT5G46960,PTR3,AT5G45000,AT5G42250,AT5G41740,AT5G39670,AATP1,AT5G39520,AT5G38910,AT5G38900,AT5G39110,LSU2,DMR6,AT5G24210,MTN3,AT5G23240,WRKY38,AT5G22555,AT5G22530,AILP1,GSTF12,GLN1;4,AT5G15180,PBS3,CWINV6,AT5G11930,HSP17.6A,GLR2.5,AT5G10760,NF-YA10,AT5G03350,GSTL1,AT5G02580,AT5G02420,AT5G02230,LECRKA4.1,SR1,AT3G62960,AT3G60420,AT3G60470,DIN2,MRP9,AT3G57950,BGL2,AT3G57460,BG3,WRKY70,AT3G56620,AT3G55890,UGT73D1,PAD4,AT3G51660,AT3G51330,BCS1,HR4,LSU1,AT3G48640,AT3G48080,AT3G47480,AT3G47540,AT3G47090,HSP17.4,CRK4,LOX2,FAR4,AT3G44620,APL3,AT4G39670,EDS5,AT4G38560,AT4G38340,AT4G37290,AT4G35190,AT4G33720,AT4G33040,AT4G32950,AT4G33070,AT4G31875,GGT4,AT4G28570,AT4G28350,AT4G26950,AT4G26530,CSLG3,CSLG2,CHX17,AT4G23610,CRK24,CRK14,CRK6,CRK7,RK3,AAT1,RLP49,AT4G11890,AT4G11900,AT4G10500,AT4G05590,AT4G04750,RLP46,CRK36,CRK37,AT4G03450,AT4G01390,AT4G00700,AT1G17960,AT1G22160,FMO1,AT1G13750,AT1G51620,HCHIB,SCPL14,AT1G35910,AT1G66880,RLP34,AT1G31550,AT1G66090,AT3G28510,AT3G28540,AT3G19970,PCC1,AT3G22910,BAM1,AT5MAT,AT3G21080,AT3G28580,ZF2,RLP41,RLP42,MRP8,MRP7,AT3G13130,AAE16,AT3G22060,AT3G28007,WRKY54,DMP1,AT3G24954,AT3G26510,CYP71B23,CYP71B3,CYP71B24,AT3G29240,RLP37,AT3G29250,PMT5,CYP72A14,PAP17,AT3G13950,PAD3,AT3G16150,NAC3,LBD41,AT3G04210,AT3G03150,AT3G08870,AIR12,AT3G10320,CA1,AT3G11580,AT3G03870,AT1G13470,AT1G17745,AT1G15790,AGP5,WAK3,WAK1,NIA1,MYBL2,AT1G64360,RLP7,AT1G76350,PR5,BOR5,GA2OX2,AT1G73800,AT1G73805,KTI1,AIG1,MYB90,HWI1,AT1G74440,GSTU10,GSTU11,AT2G41730,CHI,MYB2,ZIP11,NRT2.2,AT1G08050,AOX1D,AT1G78290,AT1G78410,AT1G17310,NIMIN1,AT1G21520,PGP12,TRX5,AT1G26390,NRT2.5,SBT3.5,AT1G35710,GRX480,AT1G63530,AT1G49750,AT1G50090,UGT85A1,AT1G64590,AT1G56150,GSTF5,AT1G77920,AT1G78020,AT1G68620,CIPK17,AT1G64160,AT1G34750,SRG1,AT1G28570,AT1G29020,CYP71B28,PCR2,G-TMT,AT1G14780,RDR1,TH7,RK1,AT1G23390,AT2G17500,UGT74E2,MGDC,AT2G04070,MIPS2,SOBIR1,AT2G21640,TAT3,CNGC11,NUDT6,NUDT5,WRKY59,YLS9,MC6,AT1G78780,AT1G70270,NRT1.1,AT1G10340,AT1G55780,AT1G65500,BIP3,ESL1,PORC,AT1G03400,AT1G24140,AT1G23060,AT1G76960,AT1G03495,VSR6,NAC042,LOG1,ALD1,RLP20,AT2G32190,AT2G32150,AT2G32160,AT2G32140,LURP1,AT2G25625,AT2G15120,CDA1,AT2G18690,PNP-A,AT2G39050,PHT1;4,GSTU3,SAG13,XTH10,PR1,AT2G47880,AT2G29670,ABCB4,AT2G47130,AT2G29070,AT2G39210,AT2G38340,AT2G32560,CSLB01,FRK1,AT2G33830,AT2G30550,RLP23,AT2G30670,HB31 RUBIN_WT-FN/WT-N_UP Up-regulated by WT FN vs. WT -N (Dataset 1 PubmedID:19933203) NDHH,CCSA,NDHD,ORF31,PETG,PSAJ,RPL33,RPS18,PSBB,PSBT,PSBN,RPS11,RPL36,RPS8,RPL14,RPL16.CHLOROPLAST,RPS3.CHLOROPLAST,RPL22,RPS19,RPL23.1,YCF1.1,RPS2,RPOC2,RPOC1,PSBD,PSBC,PSAA,YCF3,RPS4.CHLOROPLAST,NDHJ,ACCD,PSAI,YCF4,YCF10_CEMA,ATPF,HEMD,MATK,RPS16,ACA4,CAO,AFO,PHR2,AT2G33180,AT1G67700,FXG1,AT4G17245,AT4G16155,OPT3,ELIP2,AT4G14100,AT4G15830,AT4G14890,MES16,LIL3:1,AT4G17560,AT4G15510,AT4G17810,AT4G16410,AT4G15680,AT4G14870,TIP2;2,AT4G17240,AT4G17540,AT4G16390,AT4G15660,AT4G15690,AT4G15700,TCX2,NF-YB3,AT1G25230,PAL3,BHLH101,AT1G73470,DR4,CYCA1;1,AT1G51080,AT1G51110,AT1G51100,AT1G33600,AT1G33590,AT1G45332,LHCA5,AT5G13510,AT1G26230,AT1G26220,AT5G11070,AT5G28750,BZO2H3,VSP1,AT5G09240,AT5G19750,AT5G28500,AT5G13140,CPN20,GER3,AT5G10690,HEMC,AT5G08400,AT5G20130,DIN10,AT5G19970,AT5G19940,MAP1D,AT4G37180,AT4G36390,AT4G36670,AT-IE,AT4G37110,AT4G36700,BEE2,PSRP5,AT3G51870,G4,AT3G56680,RPL9,AT1G57770,AT5G16980,KIN1,AT5G16030,AT5G16140,AT5G16250,EMB2247,DND1,AT5G14910,AT5G14920,AT5G15510,CA2,AT1G31710,AT1G31690,AT1G50730,AT5G35170,AT5G35210,AT5G27560,AT5G27290,AT5G26260,AT5G26665,IREG3,AT5G26280,TNY,ENODL13,LBD37,EB1C,AT5G66470,AT5G66520,AT5G66530,AT5G66230,HB25,AT5G65220,ASN2,AT5G64580,C/VIF2,XYL4,AT5G64080,AT5G64380,ERS,PSAN,FP3,SHA1,BGAL10,PAP29,NDPK2,EMB2746,AT5G63430,GSA1,AT5G62840,EMB2759,AT5G63100,ALDH12A1,AT5G62720,AT5G62350,AT5G62340,AT5G62360,ACHT5,AT5G60680,MYB34,AT5G59750,MES18,AT5G58260,AT5G58480,AT5G58250,AT5G57785,AT5G57655,AT5G57170,CIA2,MKK6,AT5G56850,AT5G56100,AT5G55520,AT5G55580,CRR21,AT5G55220,FTSZ1-1,LHCB3,AT5G54600,PTAC15,AT5G53490,EMB2737,AT5G53580,SPCH,ORG1,AT5G52960,AT5G52970,AT5G52780,HCF106,PGM,AT5G52010,CRR1,AT5G51540,PLE,AT5G51110,AT5G50915,FSD2,FRO6,CPHSC70-2EATSHOCKPROTEIN70-2,BZIP1,BXL1,AT5G48790,OVA2,AT5G48460,AT5G48630,AT5G48830,AT5G48490,DIR1,AT5G48220,AT5G48470,AT5G48480,CYP708A2,THAS1,AT5G47610,AT5G47550,AT5G47190,AT5G47500,AT5G46580,APE2,CIPK20,CHLI2,AT5G45950,FKBP13,AT5G45700,AT5G45040,AT5G44520,CEST,FLA13,AT5G44020,NDH18,AT5G42765,AT5G42070,AT5G41050,CLC-A,RPL27,EMB506,SIP1,AT5G39790,CRR7,AT5G39080,AT5G38510,AT5G38520,AT5G38290,AT5G38020,RVE2,THI2.2,PGLP1,AT5G36710,CCB3,G6PD1,AT5G24490,SQE6,AT5G23820,FSD3,AT5G22920,AT5G23070,HCF136,CAS,EMB1211,AT5G19120,APL1,AT5G22340,EMB269,AT5G18600,PCB2,BMY3,AT5G17660,PSRP6,EMB1241,UGP2,AT5G17670,AT5G16650,TIC40,RVE1,TRXF2,AT5G14650,PDF1B,AT5G14450,AT5G14320,NAP14,AT5G14120,FZR3,GUN5,SIG4,AT5G13650,DIT1,AT5G11450,AT5G11480,APT5,OCP3,AT5G10160,AT5G08610,AT5G07900,AT5G08050,E13L3,MYB29,WCRKC1,AT5G07030,AT5G07020,PGIP2,2-CYSPRXB,EGY2,AT5G05250,NAS1,AT5G04810,CPSRP54,KCS19,AT5G03120,AT5G03230,AT5G02940,AT5G02890,AT5G02710,AT5G02160,AT5G01910,STN8,AT5G01590,APG1,AT3G63510,AT3G63490,AT5G01015,AT3G63160,CSP41A,RRF,APG3,CP12-2,AT3G62550,AT3G61870,AT3G62060,AT3G61930,ROC4,AT3G61080,FLA8,AT3G60370,AT3G60210,AT3G59930,AT3G59980,AT3G59940,AT3G59040,GUN4,MTPA2,GIS,AT3G57830,SIP2,BPG2,BHLH039,AT3G56650,AT3G56330,AT3G56010,DFD,ROPGEF6,PPL1,OVA1,AT3G55250,LHCA1,AT3G54750,AT3G54210,HCEF1,TBL36,FES1B,UPP,FLN1,CP29,AT3G53560,LUT1,AT3G53190,BGAL2,FTSZ2-2,AT3G52150,AT3G51720,AT3G52110,SSL4,AT3G51510,AT3G51140,PSBO2,AT3G51280,AT3G50560,MES10,AT3G50685,AT3G50270,LBD38,AT3G49790,NACA2,AT3G49140,AT3G48720,GSA2,AT3G48200,PDE312,AT3G48460,AT3G48350,AT3G48420,BT2,AT3G47800,CHL,EDD1,AT3G47650,NOA1,ASN1,TCP14,AT3G47560,PTAC16,DUT1,TOC75-III,COPT2,AT3G46490,XTR8,AT3G45160,LOX2,AT4G39960,FKBP16-2,SAMC1,AT4G39675,EMB2453,AT4G39040,AT4G38840,AT4G38470,ANT,PDE191,XTH7,LBD39,MEE59,AGP18,BT5,CYP81F4,AT4G37510,CLC-E,AT4G35730,SEN1,AT4G35250,SSR16,AT4G34820,MRL1,AT4G34290,AT4G34730,ASE2,AT4G34760,CYCD3;1,SEP1,AT4G34220,UGT73B1,AT4G34090,AT4G33760,AT4G33660,AT4G33960,HDA14,CDC20.2,AT4G32915,AUR1,AT4G32340,TIFY8,ENODL15,MGD1,PGR3,GPX7,CYP82C4,AT4G31040,FAD6,AT4G31210,BRS1,AT4G30720,AT4G30690,ATS2,AT4G30450,AT4G30620,AT4G29270,AT4G29360,EMB2726,PSB28,EXPB3,EMB1923,AT4G28080,NARA5,AT4G27700,PORB,ENODL2,CYP709B3,AT4G26520,AT4G26530,AT4G26555,AT4G26670,AT4G26370,BETA-OHASE1,AT4G25835,AT4G25830,CIL,ACP4,CHLM,AT4G24750,RBP31,HB22,AT4G24810,AT4G24930,CPHSC70-1,AT4G23940,AT4G24090,AT4G24175,AT4G23820,AT4G23670,AT4G23800,CRF2,SP1L5,AT4G22830,AT4G22470,APT3,SMO1-3,BGLU47,AT4G21870,PSBQA,EMB1417,RP1,AT4G20120,PTAC14,IRT2,AK-HSDHII,AT4G19830,IRT1,NCED4,AT4G19410,AT4G19100,CHLI1,SS4,AT4G13220,AT4G12830,STOMAGEN,SKU5,AIR1,CYP706A5,AT4G11190,AT4G11175,AT4G11100,CRK30,AT4G10060,ATPD,RH39,AT4G09050,APX4,EHD2,PSBQ-2,MSRB6,EMB2369,AT4G04330,MEE51,AT4G03100,XTH9,AT4G03150,AT4G02530,AT4G02790,AT4G02850,PSAD-1,AT4G02800,AT4G02990,TOC159,PRL,GH9B13,TROL,AT4G01310,AT1G32080,AT1G25550,HCF173,DAL1,PDLP3,HEME2,AT2G33450,AT2G40480,AT1G17850,CAB3,LHCA6,HEMA1,F2KP,AT1G07050,AT1G18060,AT1G18090,AT1G20810,PGL1,CYP78A5,ATLP-1,AT1G18170,AT1G50900,AT1G56220,EMB2738,EXPA1,AT1G69523,AT1G66820,FAD7,HB33,AT1G75190,AT1G32550,LOL1,AT1G66100,AT1G33290,CYP81D1,AT3G28270,AT3G18890,AT3G52170,CP33,AT3G20680,AT2G34060,AT3G25660,AT3G27180,GHS1,BGAL1,AT3G13740,AT3G22150,AT3G22210,AT3G15190,AT3G15110,AT3G23940,AT3G19030,CYCP2;1,AT3G18960,PSBTN,AT3G13470,FLU,BTS,AT3G20230,AT3G12870,AT3G12900,AT3G28900,HCF101,AT3G23760,AT3G23700,AT3G13180,AT3G13120,XTH16,RALFL24,UGT88A1,AT3G16530,HEME1,RPL12-C,AT3G28130,AT3G15570,AT3G10840,AOC1,AT3G25805,EMB2729,AT3G20370,MYB10,PGK1,AT3G12685,EMB1865,AT3G29230,AT3G18680,CFM3A,AT3G23080,AT3G29185,NAI2,AT3G25190,CCB1,AT3G12930,RFC3,AT3G28460,AT3G25480,AT3G19850,AT3G20820,AT3G19480,AT3G21300,AT3G21260,EMB2083,DELTA-TIP,NDF4,MAD2,RPL15,ATPRXQ,EMB1270,BGLU44,AT3G18050,AT3G15680,AT3G15630,AT3G27750,LHCB2.3,FAD5,AT3G15720,SOL1,MFP1,AT3G14330,AT3G17680,AT3G15520,AT3G15450,AT3G16670,AT3G16560,AT3G17350,AT3G06070,AT3G02640,AT3G02450,AT3G06500,TRXZ,AT3G06980,PTAC3,EMB2458,GASA5,AT3G08030,AT3G08740,LTP6,AT3G09580,AIF1,AT3G04550,AT3G04650,AT3G04760,AT3G03980,AT3G02120,AT3G02060,AT3G05600,AT3G05730,DFC,AT3G10060,PQL1,AT3G08920,PYK10,YLMG1-1,PTAC13,AT3G04790,CA1,CS26,CYP38,AT3G09050,HY2,AT3G11630,AT3G16460,RIF10,MAP1C,HRS1,AT3G16370,NSP3,JAL31,JR1,AT3G16450,AT1G06350,PIP1C,AT1G44000,ARR7,AT1G15710,LHCB6,AT1G28100,LTPG1,GAPB,NAS4,BGLU18,NDF5,TAPX,AT1G77630,AT1G29670,MYB20,AT1G52220,AT1G73600,AT1G72250,AT1G76790,AT1G71500,AT1G72640,AT1G76450,BZIP,AT1G73655,TPPB,BEE3,AT1G78180,AT1G35420,AT1G66430,AT1G33940,AT1G36390,RPS17,TIFY7,AT1G74670,AT1G74370,AT1G68520,PTAC17,AT1G80380,AT1G80440,MURE,FLN2,SP1L2,HEMB1,AT1G74070,AT1G68190,SCPL31,EMB2654,AT2G43530,AT2G43560,AT2G43550,AT2G43535,AT2G43620,AT2G43590,GLYR2,AT1G32470,GSTU20,AT1G49200,AT1G06190,RIP2,TIC110,AT1G43670,AT1G21350,AT1G21500,AT1G29070,BXL2,AT1G12250,ATBETAFRUCT4,AT1G53520,AT1G01320,RPL4,AT1G75460,EMB2184,PRPL11,SCRM2,GAPA-2,AT1G12800,FNR2,AT1G48460,AT1G48570,GATB,LPA19,AT1G18810,NDF6,ATMPK13,AT1G14270,AT1G14345,WHY1,AT1G49050,AT1G71720,AT1G63610,AT1G01170,AT1G01080,AT1G49650,AT1G01970,AT1G49975,HIK,AT1G18440,AT1G47400,ALB1,BEE1,SKS5,PSAO,PETE1,CYCB2;4,AT1G76110,NDF1,AT1G16080,AAE14,AT1G11430,TLP8,UBC20,AT1G50450,PDE318,AT1G65870,AT1G22550,AT1G22500,AT1G22430,AT1G22570,AGL87,AT1G64680,AT1G64510,AT1G33810,AT1G33790,AT1G35680,AT1G80030,AT1G56050,CSLD5,AT1G02820,AT1G74730,RPS9,AT1G53800,PTAC2,XYL1,AT1G48350,AT1G53870,AT1G68590,AT1G68670,CRR23,AT1G70820,PAC,AT1G64150,AT1G73120,AT1G73110,EMB1273,AT1G49380,AT1G49500,PTAC6,AT1G21680,AT1G17200,EPF2,AT1G15180,AT1G15140,PDF1A,AT1G14120,PQL2,AT1G14030,AT1G62780,AT1G75960,TY2,3-OCT,CDKB2;2,PAP3,CP5,CCB4,GASA1,AT1G54500,AT1G75690,AT1G23390,MLP423,GRP3S,AT2G05310,PSAD-2,AT1G78460,EMB1473,AT1G65230,UGT75B1,AT1G10522,EMB2004,AT2G38820,AT2G36145,GDU4,LHCB2.2,AT2G17240,AT2G22230,AT2G28605,KCS12,AT2G31730,RAP,CR88,MAX2,LSH10,AT2G17033,PAP7,AT2G01870,MCM4,AT2G04790,CRB,AT1G04420,AT1G60000,AT2G21530,SULA,AT2G21385,AT2G40400,AT2G36885,XTH32,AT2G36835,SIGF,AT2G04360,CPZ,AT2G21860,AT2G21960,APG10,AT2G36570,AT2G35800,AT2G36000,NHL12,PDF1,AT2G21210,AT2G03750,SEP4,CYP79B3,CPN60A,AT1G78995,LUP1,TOC33,AT1G79080,PP2-A5,AT1G02150,TLP18.3,AT1G22700,AT1G22630,AT1G54740,AT1G78820,AT1G78860,TPS8,SRS,ENODL14,GPX1,AT1G11860,GSTU18,AT1G27480,NPGR1,AT1G09390,AT1G09500,AT1G30820,PSAG,UKL3,EMB2394,EXPB2,AMI1,AT1G09750,AT1G09900,AT1G70200,FRO3,SIG2,NPQ1,SYP111,LIN2,PSB27,AT1G23205,ECHID,AT1G60590,AT1G77060,ABC4,AT1G52100,ZKT,CPN60B,TPX2,AT1G62510,AT1G62480,AT1G62500,AT1G51400,AT1G23790,AT2G43030,PSAE-2,AT2G18300,AT2G20670,AT2G20690,AT2G10940,AT2G37130,MEE14,AT2G15960,AT2G05540,GRP-3,PR-1-LIKE,AT2G19970,AT2G25450,AT2G27420,AT2G03420,RPH1,AT2G17972,KCS8,AT2G37470,AT2G37220,AT2G37450,SCA3,SCY1,MOD1,LCR69,AT2G45180,AT2G38870,AT2G27680,XTH4,AT2G28790,AT2G29340,AT2G29310,AT2G29290,AT2G29180,TUB7,AT2G27130,CIPK3,CRR3,MLP329,AT2G41250,AT2G14660,RPB5D,AT2G47840,SYCOARATH,CRR6,DEGP2,AT2G24020,AT2G35260,AT2G24090,AT2G24060,AT2G46220,AT2G14880,SKL2,AT2G35410,OVA4,AUR2,ATCTH,AT2G25830,MIOX2,AT2G46910,EXPA15,CYP707A2,AT2G44920,CDPMEK,CHL-CPN10,AT2G44640,AT2G34620,AT2G45850,AT2G18940,PTAC12,PPL2,JAL22,LHB1B1,SVR1,AT2G32500,PSRP4,CAX1,MES3,PDX1L4,EXP3,AT2G37660,ISPD,AT2G44040,AGP17,SNG1,SCPL13,YCF37,AT2G39920,AT2G44380,EDA3,AT2G33800,AT2G33830,WHY3,PLPB,CYP76C1,AT2G30600,AT2G32640,AT2G32650,AT2G39670,PSBP-2,AT2G30695,AT2G41990,AT2G41950,AT2G26690,AT2G42220,AT2G42110 RUBIN_WT-FN/WT-N_DN Down-regulated by WT FN vs. WT -N (Dataset 1 PubmedID:19933203) PLA2A,WRKY15,AT2G26440,UGT76D1,AT2G23270,AT2G41640,AT2G45220,HRE2,AT5G12420,SUFE2,AT1G67800,AT1G67850,AT5G12340,ACD6,AT4G17215,AT4G15610,XBAT34,TPS5,AT4G14020,AT4G17670,AT4G16190,AT4G15620,PPDK,CYP705A4,AT4G15400,CIPK4,AT4G14610,GLP9,AT4G14090,PAP1,PUP1,AT1G56710,AT1G56610,ZAT6,MKK9,AT1G44130,AT1G51140,AT1G35210,AT1G35190,RD21,SULTR4;1,AT1G26290,AT1G26250,EXL4,AT5G09480,AT5G11090,AT5G09290,ASP2,RAP2.11,WRKY75,AT5G10650,SPS1F,AT5G20400,AT5G19875,AT5G20910,CEN2,HSF4,AT4G36710,AT1G31820,SIB1,CAX3,AT3G51890,AT1G16670,AT1G51850,AT1G51890,AT1G51860,MYB50,AT1G57630,AT5G14730,SAG101,AT1G50740,AT5G35190,XGD1,AT5G27830,CNI1,PNC2,CBP60G,AT5G26731,AT5G25930,AT5G25820,AT5G25260,AT5G25450,AT5G24870,AT5G24810,AT5G67340,ZF1,APK4,AT5G67600,AT5G66930,AT5G66815,DAR3,AT5G66390,DAR5,STR18,AT5G66250,AT5G65530,AT5G65300,AT5G65240,PROPEP2,AT5G65040,XND1,AT5G64550,BETA-UP,AT5G64250,OPT4,AT5G64510,AAP4,AT5G63905,SAL2,AT5G63990,AT5G63560,AT5G63130,AT5G63030,GSTU9,AT5G62150,BON1,PMSR1,EXO70E2,GUS1,SNAP33,NRT2.4,RLK1,AT5G60250,AT5G60280,ALP,AT5G60520,RHL41,AT5G59670,MYB59,AT5G59550,AT5G59490,AT5G59530,CRCK1,AT5G58980,AT5G59050,CYP86A1,WNK4,AT5G58540,AT5G57910,XTH12,XTH13,AT5G56980,AT5G56350,UBC30,WRKY2,AT5G55860,OPT1,AT5G55560,AT5G55450,AT5G55420,SUMO3,AT5G55050,SGP1,PBP1,ANK,UF3GT,HGO,AT5G53590,SPDS3,CLPX,AT5G53420,YSL3,AT5G52740,AT5G52760,AT5G52750,AT5G52810,HSP90.1,AT5G52390,AT5G51830,AT5G51440,AT5G50800,ERD1,AT5G50560,AT5G50260,WR3,AT5G49690,AT5G49710,CLC-C,PNG1,AAP6,AT5G49350,AT5G49080,AT5G48370,BIR1,ATGLR1.2,GLR1.3,NSP5,AT5G48290,RABA4C,AT5G47635,AT5G47050,AT5G47060,AT5G46960,BI1,AT5G46520,DELTA-OAT,KAT1,AT5G46230,WRKY8,SAG12,AT5G45500,AT5G45350,DUR3,AT5G45000,PP2-A8,PP2-A6,NPR3,MAP18,AT5G44920,AT5G44550,AT5G43910,AT5G43150,AT5G42830,CML37,DFR,AT5G42050,CHX18,AT5G41740,AT5G41670,AT5G41280,AT5G41400,AT5G41350,BEL1,LHT1,AT5G40690,AT5G40370,AT5G39670,AATP1,AT5G39520,NAC6,GER2,AT5G38910,AT5G38900,AT5G38895,AT5G39020,AT5G39030,AT5G39110,AT5G38700,AT5G38210,AT5G37690,AT5G37740,GSR1,AT5G37990,AT5G37070,AT5G35580,LSU2,DMR6,AT5G24210,AT5G23850,CYP86B1,AT5G22540,WRKY38,AT5G22555,AT5G22530,AT5G22460,AILP1,AT5G22250,RHS18,NAC090,NIT4,AT5G18900,AT5G18780,AT5G18470,AT5G18640,ANAC087,AT5G18130,CAX7,AT5G17760,GSTF12,GAD,GLN1;4,SK13,MYB40,AT5G14130,TBP1,AT5G13900,AT5G13580,ZIFL1,PPH,AT5G13810,AT5G12890,AT5G13200,PBS3,RAP2.6L,AT5G13190,AT5G11970,CWINV6,AT5G12880,AT5G11650,AT5G11930,AT5G11950,HSP17.6A,AT5G11600,GLR2.5,RING1,AT5G10760,AT5G10770,AT5G09800,AT5G09530,AT5G09520,TT7,NHL3,NF-YA10,AT5G06330,AT5G05340,AT5G04960,AT5G05110,ALA1,ADR1-L2,AT5G04750,AT5G03490,UPL4,NAK,AT5G02490,HTA12,AT5G02580,AT5G02420,AT5G02230,LECRKA4.1,SR1,AT5G01800,AT5G01610,FER1,BIL4,AT3G63380,AT3G62590,AT3G62920,AT3G62960,GID1B,PRP3,AT3G62260,HB-12,AT3G61960,CRF6,BAP1,AT3G60450,ATG8G,AT3G60420,DIN2,MRP9,AT3G59580,HLECRK,PME61,AT3G58550,AT3G57680,AT3G57630,AT3G57950,BGL2,AT3G57460,AT3G57540,AT3G57380,BG3,WRKY70,AT3G56620,CAN,AT3G55890,SZF1,PROT2,AT3G55910,AT3G55470,PLAIIIA,PTR1,AT3G54150,EP3,AT3G54040,RBL4,UGT73D1,AT3G53230,AT3G52710,AT3G52800,SYP122,PAD4,AT3G51440,AT3G51730,AT3G51660,AT3G51330,YLS2,BCS1,AT3G50900,AT3G50910,CML41,AT3G50610,HR4,AT3G50400,AT3G50210,CEJ1,AT3G49960,LSU1,NAC062,AT3G49160,XTH11,AT3G48790,PHT3;2,MYB45,AT3G48640,AT3G48650,CYP94B3,EDS1,ABCA2,ATH6,AT3G47970,AT3G48020,AT3G48080,AT3G47480,AT3G47540,AT3G47090,AT3G46930,AT3G46280,HSP17.4,AT3G46450,AT3G45730,CRK4,AT3G45410,AT3G45620,MPK3,FAR4,FAR5,ADT4,AT3G44400,AT3G43670,AT3G43230,AT4G39955,RABH1C,AGP3,MIPS1,APL3,AT4G39670,EDS5,AT4G39270,AT4G39140,AT4G38560,ELI3-2,AT4G38540,AT4G38060,AT4G38080,AT4G38340,AT4G37290,CYP81D8,CYP81H1,AT4G37470,AT4G36150,AT4G36210,AT4G36010,CONNEXIN32,AT4G35060,LHT7,AT4G35190,MYB32,AT4G34860,AT4G34630,AT4G34480,XLG2,CAD5,AT4G33720,AT4G33780,AT4G33420,GAMMA-VPE,ADR1-L1,AT4G33040,AT4G32950,EDA39,AT4G33070,AT4G31860,AT4G32250,AT4G31910,WRKY18,AT4G31240,AT4G30390,AT4G30230,XTH24,GGT4,XTH26,AAC3,HAE,AT4G28400,AT4G28460,BGLU10,AT4G27900,WES1,AT4G27280,AT4G26950,AT4G26470,PFK3,ACHT1,AT4G26060,ABI1,RPS2,ACS7,AT4G26120,AT4G25790,XTH14,PUM6,AT4G25390,AT4G25010,ATGP4,PWD,YSL1,AT4G23880,CSLG2,AT4G24130,CHX17,AT4G23610,WRKY53,CRK11,CRK12,CRK24,CRK14,CRK6,CRK7,AT4G22870,AT4G22980,UTR2,NYE1,ACR7,AT4G22530,AT4G22640,APG8A,CDS2,QQT2,MSRB7,MSRB9,CPK15,AT4G21580,NRT1.8,RK3,AT4G20830,AAT1,AT4G20390,PCAP1,VSR7,GSO1,AT4G20170,AT5G44810,AT4G20000,ARA7,AT4G19370,HSFA4A,AT4G18580,AT4G18425,AT4G18360,AT4G18250,RABA1E,AT4G17900,AT4G13580,AMT1;1,RLP49,NUDT7,AT4G13030,GAE5,AT4G12280,CYP706A4,AT4G11890,PLDGAMMA3,AT4G11170,ACS6,UGE5,AT4G10500,AT4G09890,MYB6,TT8,ISA3,AT4G08850,MEKK3,AT4G05590,NDB2,ATG8B,AT4G04750,ALN,RLP46,CRK36,CRK37,CRK39,AT4G04460,AT4G03450,TIC20-IV,AT4G02940,SAG21,AT4G02410,AT4G02420,SUS3,AT4G02090,AT4G01430,PPA5,AT4G01610,AT4G01700,CNGC13,GT72B1,AT4G00700,ADF8,AT4G00355,MYB51,RD20,AT1G17960,AT1G22180,AT1G22160,PAPP2C,AT1G33970,AT1G34040,FMO1,EXO70B2,AT1G51800,ILL5,MKK4,AT1G56320,HSP70,AT3G11340,AT3G12320,SCPL14,AT1G69480,NAP,AT1G35910,AT1G66500,AT1G66880,AT1G66690,ADR1,RLP34,AT3G10930,AT1G36640,AT1G66090,PMZ,AT3G28510,AT3G28540,AT3G19970,AT3G13610,SEX4,PCC1,AT3G13650,AT3G22160,AT3G21420,CML11,BAM1,AT3G26470,AT3G26440,AT5MAT,AT3G22600,AGP12,AT3G21080,AT3G28580,ZF2,AT3G18250,AT3G19660,RLP40,RLP41,RLP42,PUM5,AMT1;5,MRP8,MRP7,AT3G13130,AAE16,AT3G14920,AT3G28007,AT3G14470,AT3G14430,APG8H,AT2G38640,AT1G62840,AT3G09490,AT3G02800,DMP1,AT3G06210,RLP39,AT3G24954,ARO4,CYP71B23,CYP71B3,ALIS1,ATSYTF,RLP37,CIPK7,PMT5,TOM20-1,AT3G16990,UBC32,MYB15,AT3G23170,AT3G21710,ICL,RGS1,AT3G14700,MBF1C,DXPS1,AT3G13910,AT3G13950,RSH2,AT3G14060,AT3G26840,AT3G15650,PAD3,SULTR3;4,ELIP1,AT3G16150,CNBT1,AT3G14280,NAC3,AOX1A,AT3G17410,AT3G06780,AT3G04210,ILR1,AT3G02770,AT3G07870,AT3G09830,UBC11,S6K2,EXO70H4,PUB24,AT3G04010,NAC047,NAC046,RLP33,RLP32,VPS60.1,NAC053,AT3G10420,AT3G09960,AT3G01830,DOX1,ACR6,WRKY45,AT3G08870,ATERDJ3A,PUB9,AIR12,LAC7,AT3G03440,CYP89A9,GLR1.4,DGD1,NHL1,RGF7,PAL4,AT3G10320,AT3G09020,AT3G09010,NPC5,AT3G07700,AT3G07600,AT3G01290,GPAT5,AT3G11550,RLP30,AT3G05320,AT3G03870,GDH3,AT1G13470,ST4B,AT1G17745,AT1G13340,AT1G13830,MPK11,AT1G01520,AT1G18980,AT1G19020,GLP4,AT1G15790,AT1G43910,AT1G12290,AGP5,WAK3,WAK2,WAK1,DPL1,AT1G43020,BZIP60,AT1G55265,AT1G77770,NAC032,AT1G77570,AT1G71140,AT1G64370,AT1G64360,COR413IM1,RLP7,AT1G72240,ERO1,AT1G72800,AT1G76350,AT1G72700,AT1G72540,NAP5,BOR5,AT1G76470,HSFA8,NAP3,AT1G67860,AT1G67920,AT1G67865,GA2OX2,AT1G68850,AT1G68820,AT1G73800,AT1G73805,AIG1,CML23,MYB90,NAM,HWI1,NAC019,AT1G74440,GSTU10,AT1G74360,AT1G63720,AT1G68450,UBC5,AT1G63840,ELF5A-3,AT1G74010,AT1G69840,GSTU11,TH8,AT1G69610,AT1G68300,AT2G41730,AT2G43390,AT2G43500,TI1,CHI,MYB2,AT2G47200,ZIP11,AT2G43670,NRT2:1,NRT2.2,AT1G08050,NRT1.5,AOX1D,AT1G48210,AT1G49150,GSTU21,GSTU22,AT1G78410,AT1G17310,AT1G21400,NIMIN1,AT1G21520,GLTP2,PGP12,AT1G02470,TRX5,AT1G26390,AT1G26380,AT1G12200,CNGC10,AT1G17430,RCAR1,AT1G07500,UBC16,CYP722A1,AT1G04970,AT1G32900,NAC13,AT1G32920,NRT2.5,AT1G33030,SBT3.5,SBT3.3,AT1G05840,AT1G53030,AT1G44770,AT1G44800,AT1G35710,CDPK1,WRKY61,AT1G18830,AT1G07870,NAC010,GRX480,AT1G21120,AT1G21110,AT1G14540,CK1,AT1G71740,APK2A,AT1G63530,ADF11,AT1G01640,STZ,AT1G50090,CRT3,AT1G32700,NF-YA7,RFNR2,WRKY40,CCR2,UGT85A1,AT1G64590,MGL,AT1G64610,CYP76C6,AT1G33700,AT1G80130,ZCF37,BPEP,AT1G56120,NF-YC2,AT1G02750,AT1G59660,AT1G77920,EDS16,AT1G68620,AT1G48320,CIPK17,AT1G53790,AT1G70810,EDA4,AT1G64160,AT1G73040,AT1G72890,TIR,AT1G72900,AT1G72920,AT1G72940,MYB93,AT1G34750,MLO2,AT1G17080,SRG1,AT1G11330,GSTU25,GSTU24,NAC016,AT1G15410,AT1G13990,PDS1,BETA-VPE,AT1G13970,FUT7,CPK29,MC8,AT1G29020,ACA.L,AT1G13195,CYP71B7,AT1G21000,AT1G11700,PCR2,G-TMT,AT1G14780,RDR1,TH7,YSL7,RK1,AT1G65690,AT1G54540,AT2G18190,AT2G17500,IRE1A,HB1,ALDH7B4,RSH3,ZFP5,AT1G10585,AT1G30750,AT1G30700,AT2G36100,AT2G38800,AT2G20560,CZF1,MGDC,AT2G04070,AT2G04050,AT2G17220,MIPS2,AT2G28670,SOBIR1,AT2G21640,WRKY60,FUT4,NAC036,AT2G25240,AT1G31130,CNGC11,WRKY46,AT2G40270,NUDT6,NUDT5,WRKY59,AT2G36220,YLS9,AGP2,AT2G21100,MRH6,ACR5,SOT12,AT2G28570,AT1G79110,SERK4,MC6,NAC003,AT1G54570,SUC2,AT1G67520,NAS3,AT1G61930,AT1G78780,KCS2,AT1G70270,AT1G03290,GPT2,AT1G10340,AT1G10410,BCAT-2,AT1G30760,AT1G55780,AT1G55760,AT1G05340,AT2G17710,AT2G17740,AT1G65500,AT1G08940,BIP3,ESL1,SRC2,RPT5B,AT1G65510,FH8,AT1G22985,AT1G61370,AT1G22930,THA1,AT1G03400,CPK6,AT1G24140,FH4,AT1G61260,AT1G23140,AT1G23040,AT1G23060,AT1G60750,AT1G60740,AT1G60730,EDA16,AT1G76960,AT1G67360,AT1G24575,AR791,AT1G03495,AT1G63340,FMOGS-OX4,VSR6,AT1G05060,EFE,AT1G05000,IBH1,NAC042,ML2,AT2G28400,AT2G18370,PPA2,AT2G37110,AT2G46600,AT2G37150,ATG8D,AT2G15830,AT2G20145,AT2G27390,FD3,ALD1,RLP20,AT2G24360,AT2G32020,AT2G32210,AT2G32190,AT2G32150,AT2G24390,AT2G32160,UPS2,AT2G40110,AT2G32140,AT2G32030,AT2G31990,AT2G35730,LURP1,AT2G42350,AT2G42360,PUX2,AT2G25625,AT2G15120,AT2G18600,TTG2,AT2G24160,AT2G18690,AT2G05940,DGK3,PNP-A,AT2G18680,AT2G39050,GSTZ1,AT2G02370,PHT1;4,ATC,AT2G28780,PP2-B10,GSTU4,GSTU3,SAG13,HB-7,HB17,UCC1,AT2G41230,GLU2,AT2G41380,AT2G41410,XTH10,PR1,AT2G38740,AT2G47710,MRP4,AT2G31110,AT2G31130,AT2G47880,AT2G23840,AT2G46150,AT2G29670,AT2G35380,UGT71C1,SNF7.2,AT2G03200,RNS1,GSTF3,ABCB4,AT2G47130,AT2G29070,PSK2,NDA2,ALPHA-VPE,AT2G39420,AT2G39430,AT2G39210,CYP710A1,AT2G38340,WRKY33,AT2G41090,TCH3,AT2G41180,AT2G38300,AT2G23540,AMT2,RLK,AT2G37770,AT2G37580,AT2G37750,AT2G30840,AT2G44010,ARL,WRKY25,TET8,AT2G30140,NF-YA4,ARSK1,CYP711A1,AT2G26190,AT2G44500,FRK1,AT2G19130,AT2G30550,RLP23,AP4.3A,CYP76C2,CYP71A12,AT2G30660,AT2G30670,SEH RUBIN_LBD37-1-FN/WT-FN_UP Up-regulated by lbd37-1 FN vs. WT FN (Dataset 2 PubmedID:19933203) NUDT21,TCH4,AT5G52760,BAP1,AT3G48650,AT3G44260,AT4G33720,AT4G27280,DIC2,AT4G23680,AT4G10270,AT3G10930,AT1G66090,LBD41,AT3G10040,CML38,STZ,WRKY40,HSPRO2 RUBIN_LBD38-FN/WT-FN_UP Up-regulated by lbd38 FN vs. WT FN (Dataset 2 PubmedID:19933203) VSP1,AT5G20790,SPX1,AT1G57630,MES18,AT5G54530,AT5G52760,AAP6,AT5G46900,PDF1.2,ACA1,AT3G48650,PS3,ASN1,SUS4,AT4G33070,AT4G27280,FSD1,CORI3,TBL26,AT4G01390,AT3G10930,AT1G66090,AT1G66100,QQS,PDF1.2B,PAP17,SRG3,AT3G01830,AT1G13470,BGLU18,GSTF14,BZIP,NRT2:1,STZ,RFNR2,WRKY40,AT1G68600,AT1G43590,TAT3,MEE3,ADH1,AT2G39030,AT2G28780,AT2G39510 RUBIN_LBD38-FN/WT-FN_DN Down-regulated by lbd38 FN vs. WT FN (Dataset 2 PubmedID:19933203) AT4G15680,AT4G36700,AT5G64120,ORG1,BXL1,NAC6,BHLH039,AT4G22470,CYP81D1,BTS,WRKY45,KCS12,AT1G09500,AT2G17740,FRO3,AT1G49050 RUBIN_WT-N/WT-FN_UP Up-regulated by WT -N vs. WT FN (Dataset 2 PubmedID:19933203) PLA2A,WRKY15,AT2G26440,UGT76D1,AT2G23270,AT2G41640,AT2G45220,HRE2,AT5G12420,SUFE2,AT1G67800,AT1G67850,AT5G12340,ACD6,AT4G17215,AT4G15610,XBAT34,TPS5,AT4G14020,AT4G17670,AT4G16190,AT4G15620,PPDK,CYP705A4,AT4G15400,CIPK4,AT4G14610,GLP9,AT4G14090,PAP1,PUP1,AT1G56710,AT1G56610,ZAT6,MKK9,AT1G44130,AT1G51140,AT1G35210,AT1G35190,RD21,SULTR4;1,AT1G26290,AT1G26250,EXL4,AT5G09480,AT5G11090,AT5G09290,ASP2,RAP2.11,WRKY75,AT5G10650,SPS1F,AT5G20400,AT5G19875,AT5G20910,CEN2,HSF4,AT4G36710,AT1G31820,SIB1,CAX3,AT3G51890,AT1G16670,AT1G51850,AT1G51890,AT1G51860,MYB50,AT1G57630,AT5G14730,SAG101,AT1G50740,AT5G35190,XGD1,AT5G27830,CNI1,PNC2,CBP60G,AT5G26731,AT5G25930,AT5G25820,AT5G25260,AT5G25450,AT5G24870,AT5G24810,AT5G67340,ZF1,APK4,AT5G67600,AT5G66930,AT5G66815,DAR3,AT5G66390,DAR5,STR18,AT5G66250,AT5G65530,AT5G65300,AT5G65240,PROPEP2,AT5G65040,XND1,AT5G64550,BETA-UP,AT5G64250,OPT4,AT5G64510,AAP4,AT5G63905,SAL2,AT5G63990,AT5G63560,AT5G63130,AT5G63030,GSTU9,AT5G62150,BON1,PMSR1,EXO70E2,GUS1,SNAP33,NRT2.4,RLK1,AT5G60250,AT5G60280,ALP,AT5G60520,RHL41,AT5G59670,MYB59,AT5G59550,AT5G59490,AT5G59530,CRCK1,AT5G58980,AT5G59050,CYP86A1,WNK4,AT5G58540,AT5G57910,XTH12,XTH13,AT5G56980,AT5G56350,UBC30,WRKY2,AT5G55860,OPT1,AT5G55560,AT5G55450,AT5G55420,SUMO3,AT5G55050,SGP1,PBP1,ANK,UF3GT,HGO,AT5G53590,SPDS3,CLPX,AT5G53420,YSL3,AT5G52740,AT5G52760,AT5G52750,AT5G52810,HSP90.1,AT5G52390,AT5G51830,AT5G51440,AT5G50800,ERD1,AT5G50560,AT5G50260,WR3,AT5G49690,AT5G49710,CLC-C,PNG1,AAP6,AT5G49350,AT5G49080,AT5G48370,BIR1,ATGLR1.2,GLR1.3,NSP5,AT5G48290,RABA4C,AT5G47635,AT5G47050,AT5G47060,AT5G46960,BI1,AT5G46520,DELTA-OAT,KAT1,AT5G46230,WRKY8,SAG12,AT5G45500,AT5G45350,DUR3,AT5G45000,PP2-A8,PP2-A6,NPR3,MAP18,AT5G44920,AT5G44550,AT5G43910,AT5G43150,AT5G42830,CML37,DFR,AT5G42050,CHX18,AT5G41740,AT5G41670,AT5G41280,AT5G41400,AT5G41350,BEL1,LHT1,AT5G40690,AT5G40370,AT5G39670,AATP1,AT5G39520,NAC6,GER2,AT5G38910,AT5G38900,AT5G38895,AT5G39020,AT5G39030,AT5G39110,AT5G38700,AT5G38210,AT5G37690,AT5G37740,GSR1,AT5G37990,AT5G37070,AT5G35580,LSU2,DMR6,AT5G24210,AT5G23850,CYP86B1,AT5G22540,WRKY38,AT5G22555,AT5G22530,AT5G22460,AILP1,AT5G22250,RHS18,NAC090,NIT4,AT5G18900,AT5G18780,AT5G18470,AT5G18640,ANAC087,AT5G18130,CAX7,AT5G17760,GSTF12,GAD,GLN1;4,SK13,MYB40,AT5G14130,TBP1,AT5G13900,AT5G13580,ZIFL1,PPH,AT5G13810,AT5G12890,AT5G13200,PBS3,RAP2.6L,AT5G13190,AT5G11970,CWINV6,AT5G12880,AT5G11650,AT5G11930,AT5G11950,HSP17.6A,AT5G11600,GLR2.5,RING1,AT5G10760,AT5G10770,AT5G09800,AT5G09530,AT5G09520,TT7,NHL3,NF-YA10,AT5G06330,AT5G05340,AT5G04960,AT5G05110,ALA1,ADR1-L2,AT5G04750,AT5G03490,UPL4,NAK,AT5G02490,HTA12,AT5G02580,AT5G02420,AT5G02230,LECRKA4.1,SR1,AT5G01800,AT5G01610,FER1,BIL4,AT3G63380,AT3G62590,AT3G62920,AT3G62960,GID1B,PRP3,AT3G62260,HB-12,AT3G61960,CRF6,BAP1,AT3G60450,ATG8G,AT3G60420,DIN2,MRP9,AT3G59580,HLECRK,PME61,AT3G58550,AT3G57680,AT3G57630,AT3G57950,BGL2,AT3G57460,AT3G57540,AT3G57380,BG3,WRKY70,AT3G56620,CAN,AT3G55890,SZF1,PROT2,AT3G55910,AT3G55470,PLAIIIA,PTR1,AT3G54150,EP3,AT3G54040,RBL4,UGT73D1,AT3G53230,AT3G52710,AT3G52800,SYP122,PAD4,AT3G51440,AT3G51730,AT3G51660,AT3G51330,YLS2,BCS1,AT3G50900,AT3G50910,CML41,AT3G50610,HR4,AT3G50400,AT3G50210,CEJ1,AT3G49960,LSU1,NAC062,AT3G49160,XTH11,AT3G48790,PHT3;2,MYB45,AT3G48640,AT3G48650,CYP94B3,EDS1,ABCA2,ATH6,AT3G47970,AT3G48020,AT3G48080,AT3G47480,AT3G47540,AT3G47090,AT3G46930,AT3G46280,HSP17.4,AT3G46450,AT3G45730,CRK4,AT3G45410,AT3G45620,MPK3,FAR4,FAR5,ADT4,AT3G44400,AT3G43670,AT3G43230,AT4G39955,RABH1C,AGP3,MIPS1,APL3,AT4G39670,EDS5,AT4G39270,AT4G39140,AT4G38560,ELI3-2,AT4G38540,AT4G38060,AT4G38080,AT4G38340,AT4G37290,CYP81D8,CYP81H1,AT4G37470,AT4G36150,AT4G36210,AT4G36010,CONNEXIN32,AT4G35060,LHT7,AT4G35190,MYB32,AT4G34860,AT4G34630,AT4G34480,XLG2,CAD5,AT4G33720,AT4G33780,AT4G33420,GAMMA-VPE,ADR1-L1,AT4G33040,AT4G32950,EDA39,AT4G33070,AT4G31860,AT4G32250,AT4G31910,WRKY18,AT4G31240,AT4G30390,AT4G30230,XTH24,GGT4,XTH26,AAC3,HAE,AT4G28400,AT4G28460,BGLU10,AT4G27900,WES1,AT4G27280,AT4G26950,AT4G26470,PFK3,ACHT1,AT4G26060,ABI1,RPS2,ACS7,AT4G26120,AT4G25790,XTH14,PUM6,AT4G25390,AT4G25010,ATGP4,PWD,YSL1,AT4G23880,CSLG2,AT4G24130,CHX17,AT4G23610,WRKY53,CRK11,CRK12,CRK24,CRK14,CRK6,CRK7,AT4G22870,AT4G22980,UTR2,NYE1,ACR7,AT4G22530,AT4G22640,APG8A,CDS2,QQT2,MSRB7,MSRB9,CPK15,AT4G21580,NRT1.8,RK3,AT4G20830,AAT1,AT4G20390,PCAP1,VSR7,GSO1,AT4G20170,AT5G44810,AT4G20000,ARA7,AT4G19370,HSFA4A,AT4G18580,AT4G18425,AT4G18360,AT4G18250,RABA1E,AT4G17900,AT4G13580,AMT1;1,RLP49,NUDT7,AT4G13030,GAE5,AT4G12280,CYP706A4,AT4G11890,PLDGAMMA3,AT4G11170,ACS6,UGE5,AT4G10500,AT4G09890,MYB6,TT8,ISA3,AT4G08850,MEKK3,AT4G05590,NDB2,ATG8B,AT4G04750,ALN,RLP46,CRK36,CRK37,CRK39,AT4G04460,AT4G03450,TIC20-IV,AT4G02940,SAG21,AT4G02410,AT4G02420,SUS3,AT4G02090,AT4G01430,PPA5,AT4G01610,AT4G01700,CNGC13,GT72B1,AT4G00700,ADF8,AT4G00355,MYB51,RD20,AT1G17960,AT1G22180,AT1G22160,PAPP2C,AT1G33970,AT1G34040,FMO1,EXO70B2,AT1G51800,ILL5,MKK4,AT1G56320,HSP70,AT3G11340,AT3G12320,SCPL14,AT1G69480,NAP,AT1G35910,AT1G66500,AT1G66880,AT1G66690,ADR1,RLP34,AT3G10930,AT1G36640,AT1G66090,PMZ,AT3G28510,AT3G28540,AT3G19970,AT3G13610,SEX4,PCC1,AT3G13650,AT3G22160,AT3G21420,CML11,BAM1,AT3G26470,AT3G26440,AT5MAT,AT3G22600,AGP12,AT3G21080,AT3G28580,ZF2,AT3G18250,AT3G19660,RLP40,RLP41,RLP42,PUM5,AMT1;5,MRP8,MRP7,AT3G13130,AAE16,AT3G14920,AT3G28007,AT3G14470,AT3G14430,APG8H,AT2G38640,AT1G62840,AT3G09490,AT3G02800,DMP1,AT3G06210,RLP39,AT3G24954,ARO4,CYP71B23,CYP71B3,ALIS1,ATSYTF,RLP37,CIPK7,PMT5,TOM20-1,AT3G16990,UBC32,MYB15,AT3G23170,AT3G21710,ICL,RGS1,AT3G14700,MBF1C,DXPS1,AT3G13910,AT3G13950,RSH2,AT3G14060,AT3G26840,AT3G15650,PAD3,SULTR3;4,ELIP1,AT3G16150,CNBT1,AT3G14280,NAC3,AOX1A,AT3G17410,AT3G06780,AT3G04210,ILR1,AT3G02770,AT3G07870,AT3G09830,UBC11,S6K2,EXO70H4,PUB24,AT3G04010,NAC047,NAC046,RLP33,RLP32,VPS60.1,NAC053,AT3G10420,AT3G09960,AT3G01830,DOX1,ACR6,WRKY45,AT3G08870,ATERDJ3A,PUB9,AIR12,LAC7,AT3G03440,CYP89A9,GLR1.4,DGD1,NHL1,RGF7,PAL4,AT3G10320,AT3G09020,AT3G09010,NPC5,AT3G07700,AT3G07600,AT3G01290,GPAT5,AT3G11550,RLP30,AT3G05320,AT3G03870,GDH3,AT1G13470,ST4B,AT1G17745,AT1G13340,AT1G13830,MPK11,AT1G01520,AT1G18980,AT1G19020,GLP4,AT1G15790,AT1G43910,AT1G12290,AGP5,WAK3,WAK2,WAK1,DPL1,AT1G43020,BZIP60,AT1G55265,AT1G77770,NAC032,AT1G77570,AT1G71140,AT1G64370,AT1G64360,COR413IM1,RLP7,AT1G72240,ERO1,AT1G72800,AT1G76350,AT1G72700,AT1G72540,NAP5,BOR5,AT1G76470,HSFA8,NAP3,AT1G67860,AT1G67920,AT1G67865,GA2OX2,AT1G68850,AT1G68820,AT1G73800,AT1G73805,AIG1,CML23,MYB90,NAM,HWI1,NAC019,AT1G74440,GSTU10,AT1G74360,AT1G63720,AT1G68450,UBC5,AT1G63840,ELF5A-3,AT1G74010,AT1G69840,GSTU11,TH8,AT1G69610,AT1G68300,AT2G41730,AT2G43390,AT2G43500,TI1,CHI,MYB2,AT2G47200,ZIP11,AT2G43670,NRT2:1,NRT2.2,AT1G08050,NRT1.5,AOX1D,AT1G48210,AT1G49150,HB31,GSTU21,GSTU22,AT1G78410,AT1G17310,AT1G21400,NIMIN1,AT1G21520,GLTP2,PGP12,AT1G02470,TRX5,AT1G26390,AT1G26380,AT1G12200,CNGC10,AT1G17430,RCAR1,AT1G07500,UBC16,CYP722A1,AT1G04970,AT1G32900,NAC13,AT1G32920,NRT2.5,AT1G33030,SBT3.5,SBT3.3,AT1G05840,AT1G53030,AT1G44770,AT1G44800,AT1G35710,CDPK1,WRKY61,AT1G18830,AT1G07870,NAC010,GRX480,AT1G21120,AT1G21110,AT1G14540,CK1,AT1G71740,APK2A,AT1G63530,ADF11,AT1G01640,STZ,AT1G50090,CRT3,AT1G32700,NF-YA7,RFNR2,WRKY40,CCR2,UGT85A1,AT1G64590,MGL,AT1G64610,CYP76C6,AT1G33700,AT1G80130,ZCF37,BPEP,AT1G56120,NF-YC2,AT1G02750,AT1G59660,AT1G77920,EDS16,AT1G68620,AT1G48320,CIPK17,AT1G53790,AT1G70810,EDA4,AT1G64160,AT1G73040,AT1G72890,TIR,AT1G72900,AT1G72920,AT1G72940,MYB93,AT1G34750,MLO2,AT1G17080,SRG1,AT1G11330,GSTU25,GSTU24,NAC016,AT1G15410,AT1G13990,PDS1,BETA-VPE,AT1G13970,FUT7,CPK29,MC8,AT1G29020,ACA.L,AT1G13195,CYP71B7,AT1G21000,AT1G11700,PCR2,G-TMT,AT1G14780,RDR1,TH7,YSL7,RK1,AT1G65690,AT1G54540,AT2G18190,AT2G17500,IRE1A,HB1,ALDH7B4,RSH3,ZFP5,AT1G10585,AT1G30750,AT1G30700,AT2G36100,AT2G38800,AT2G20560,CZF1,MGDC,AT2G04070,AT2G04050,AT2G17220,MIPS2,AT2G28670,SOBIR1,AT2G21640,WRKY60,FUT4,NAC036,AT2G25240,AT1G31130,CNGC11,WRKY46,AT2G40270,NUDT6,NUDT5,WRKY59,AT2G36220,YLS9,AGP2,AT2G21100,MRH6,ACR5,SOT12,AT2G28570,AT1G79110,SERK4,MC6,NAC003,AT1G54570,SUC2,AT1G67520,NAS3,AT1G61930,AT1G78780,KCS2,AT1G70270,AT1G03290,GPT2,AT1G10340,AT1G10410,BCAT-2,AT1G30760,AT1G55780,AT1G55760,AT1G05340,AT2G17710,AT2G17740,AT1G65500,AT1G08940,BIP3,ESL1,SRC2,RPT5B,AT1G65510,FH8,AT1G22985,AT1G61370,AT1G22930,THA1,AT1G03400,CPK6,AT1G24140,FH4,AT1G61260,AT1G23140,AT1G23040,AT1G23060,AT1G60750,AT1G60740,AT1G60730,EDA16,AT1G76960,AT1G67360,AT1G24575,AR791,AT1G03495,AT1G63340,FMOGS-OX4,VSR6,AT1G05060,EFE,AT1G05000,IBH1,NAC042,ML2,AT2G28400,AT2G18370,PPA2,AT2G37110,AT2G46600,AT2G37150,ATG8D,AT2G15830,AT2G20145,AT2G27390,FD3,ALD1,RLP20,AT2G24360,AT2G32020,AT2G32210,AT2G32190,AT2G32150,AT2G24390,AT2G32160,UPS2,AT2G40110,AT2G32140,AT2G32030,AT2G31990,AT2G35730,LURP1,AT2G42350,AT2G42360,PUX2,AT2G25625,AT2G15120,AT2G18600,TTG2,AT2G24160,AT2G18690,AT2G05940,DGK3,PNP-A,AT2G18680,AT2G39050,GSTZ1,AT2G02370,PHT1;4,ATC,AT2G28780,PP2-B10,GSTU4,GSTU3,SAG13,HB-7,HB17,UCC1,AT2G41230,GLU2,AT2G41380,AT2G41410,XTH10,PR1,AT2G38740,AT2G47710,MRP4,AT2G31110,AT2G31130,AT2G47880,AT2G23840,AT2G46150,AT2G29670,AT2G35380,UGT71C1,SNF7.2,AT2G03200,RNS1,GSTF3,ABCB4,AT2G47130,AT2G29070,PSK2,NDA2,ALPHA-VPE,AT2G39420,AT2G39430,AT2G39210,CYP710A1,AT2G38340,WRKY33,AT2G41090,TCH3,AT2G41180,AT2G38300,AT2G23540,AMT2,RLK,AT2G37770,AT2G37580,AT2G37750,AT2G30840,AT2G44010,ARL,WRKY25,TET8,AT2G30140,NF-YA4,ARSK1,CYP711A1,AT2G26190,AT2G44500,FRK1,AT2G19130,AT2G30550,RLP23,AP4.3A,CYP76C2,CYP71A12,AT2G30660,AT2G30670,SEH RUBIN_WT-N/WTFN_DN Down-regulated by WT -N vs. WT FN (Dataset 2 PubmedID:19933203) NDHH,CCSA,NDHD,ORF31,PETG,PSAJ,RPL33,RPS18,PSBB,PSBT,PSBN,RPS11,RPL36,RPS8,RPL14,RPL16.CHLOROPLAST,RPS3.CHLOROPLAST,RPL22,RPS19,RPL23.1,YCF1.1,RPS2,RPOC2,RPOC1,PSBD,PSBC,PSAA,YCF3,RPS4.CHLOROPLAST,NDHJ,ACCD,PSAI,YCF4,YCF10_CEMA,ATPF,HEMD,MATK,RPS16,ACA4,CAO,AFO,PHR2,AT2G33180,AT1G67700,FXG1,AT4G17245,AT4G16155,OPT3,ELIP2,AT4G14100,AT4G15830,AT4G14890,MES16,LIL3:1,AT4G17560,AT4G15510,AT4G17810,AT4G16410,AT4G15680,AT4G14870,TIP2;2,AT4G17240,AT4G17540,AT4G16390,AT4G15660,AT4G15690,AT4G15700,TCX2,NF-YB3,AT1G25230,PAL3,BHLH101,AT1G73470,DR4,CYCA1;1,AT1G51080,AT1G51110,AT1G51100,AT1G33600,AT1G33590,AT1G45332,LHCA5,AT5G13510,AT1G26230,AT1G26220,AT5G11070,AT5G28750,BZO2H3,VSP1,AT5G09240,AT5G19750,AT5G28500,AT5G13140,CPN20,GER3,AT5G10690,HEMC,AT5G08400,AT5G20130,DIN10,AT5G19970,AT5G19940,MAP1D,AT4G37180,AT4G36390,AT4G36670,AT-IE,AT4G37110,AT4G36700,BEE2,PSRP5,AT3G51870,G4,AT3G56680,RPL9,AT1G57770,AT5G16980,KIN1,AT5G16030,AT5G16140,AT5G16250,EMB2247,DND1,AT5G14910,AT5G14920,AT5G15510,CA2,AT1G31710,AT1G31690,AT1G50730,AT5G35170,AT5G35210,AT5G27560,AT5G27290,AT5G26260,AT5G26665,IREG3,AT5G26280,TNY,ENODL13,LBD37,EB1C,AT5G66470,AT5G66520,AT5G66530,AT5G66230,HB25,AT5G65220,ASN2,AT5G64580,C/VIF2,XYL4,AT5G64080,AT5G64380,ERS,PSAN,FP3,SHA1,BGAL10,PAP29,NDPK2,EMB2746,AT5G63430,GSA1,AT5G62840,EMB2759,AT5G63100,ALDH12A1,AT5G62720,AT5G62350,AT5G62340,AT5G62360,ACHT5,AT5G60680,MYB34,AT5G59750,MES18,AT5G58260,AT5G58480,AT5G58250,AT5G57785,AT5G57655,AT5G57170,CIA2,MKK6,AT5G56850,AT5G56100,AT5G55520,AT5G55580,CRR21,AT5G55220,FTSZ1-1,LHCB3,AT5G54600,PTAC15,AT5G53490,EMB2737,AT5G53580,SPCH,ORG1,AT5G52960,AT5G52970,AT5G52780,HCF106,PGM,AT5G52010,CRR1,AT5G51540,PLE,AT5G51110,AT5G50915,FSD2,FRO6,CPHSC70-2EATSHOCKPROTEIN70-2,BZIP1,BXL1,AT5G48790,OVA2,AT5G48460,AT5G48630,AT5G48830,AT5G48490,DIR1,AT5G48220,AT5G48470,AT5G48480,CYP708A2,THAS1,AT5G47610,AT5G47550,AT5G47190,AT5G47500,AT5G46580,APE2,CIPK20,CHLI2,AT5G45950,FKBP13,AT5G45700,AT5G45040,AT5G44520,CEST,FLA13,AT5G44020,NDH18,AT5G42765,AT5G42070,AT5G41050,CLC-A,RPL27,EMB506,SIP1,AT5G39790,CRR7,AT5G39080,AT5G38510,AT5G38520,AT5G38290,AT5G38020,RVE2,THI2.2,PGLP1,AT5G36710,CCB3,G6PD1,AT5G24490,SQE6,AT5G23820,FSD3,AT5G22920,AT5G23070,HCF136,CAS,EMB1211,AT5G19120,APL1,AT5G22340,EMB269,AT5G18600,PCB2,BMY3,AT5G17660,PSRP6,EMB1241,UGP2,AT5G17670,AT5G16650,TIC40,RVE1,TRXF2,AT5G14650,PDF1B,AT5G14450,AT5G14320,NAP14,AT5G14120,FZR3,GUN5,SIG4,AT5G13650,DIT1,AT5G11450,AT5G11480,APT5,OCP3,AT5G10160,AT5G08610,AT5G07900,AT5G08050,E13L3,MYB29,WCRKC1,AT5G07030,AT5G07020,PGIP2,2-CYSPRXB,EGY2,AT5G05250,NAS1,AT5G04810,CPSRP54,KCS19,AT5G03120,AT5G03230,AT5G02940,AT5G02890,AT5G02710,AT5G02160,AT5G01910,STN8,AT5G01590,APG1,AT3G63510,AT3G63490,AT5G01015,AT3G63160,CSP41A,RRF,APG3,CP12-2,AT3G62550,AT3G61870,AT3G62060,AT3G61930,ROC4,AT3G61080,FLA8,AT3G60370,AT3G60210,AT3G59930,AT3G59980,AT3G59940,AT3G59040,GUN4,MTPA2,GIS,AT3G57830,SIP2,BPG2,BHLH039,AT3G56650,AT3G56330,AT3G56010,DFD,ROPGEF6,PPL1,OVA1,AT3G55250,LHCA1,AT3G54750,AT3G54210,HCEF1,TBL36,FES1B,UPP,FLN1,CP29,AT3G53560,LUT1,AT3G53190,BGAL2,FTSZ2-2,AT3G52150,AT3G51720,AT3G52110,SSL4,AT3G51510,AT3G51140,PSBO2,AT3G51280,AT3G50560,MES10,AT3G50685,AT3G50270,LBD38,AT3G49790,NACA2,AT3G49140,AT3G48720,GSA2,AT3G48200,PDE312,AT3G48460,AT3G48350,AT3G48420,BT2,AT3G47800,CHL,EDD1,AT3G47650,NOA1,ASN1,TCP14,AT3G47560,PTAC16,DUT1,TOC75-III,COPT2,AT3G46490,XTR8,AT3G45160,LOX2,AT4G39960,FKBP16-2,SAMC1,AT4G39675,EMB2453,AT4G39040,AT4G38840,AT4G38470,ANT,PDE191,XTH7,LBD39,MEE59,AGP18,BT5,CYP81F4,AT4G37510,CLC-E,AT4G35730,SEN1,AT4G35250,SSR16,AT4G34820,MRL1,AT4G34290,AT4G34730,ASE2,AT4G34760,CYCD3;1,SEP1,AT4G34220,UGT73B1,AT4G34090,AT4G33760,AT4G33660,AT4G33960,HDA14,CDC20.2,AT4G32915,AUR1,AT4G32340,TIFY8,ENODL15,MGD1,PGR3,GPX7,CYP82C4,AT4G31040,FAD6,AT4G31210,BRS1,AT4G30720,AT4G30690,ATS2,AT4G30450,AT4G30620,AT4G29270,AT4G29360,EMB2726,PSB28,EXPB3,EMB1923,AT4G28080,NARA5,AT4G27700,PORB,ENODL2,CYP709B3,AT4G26520,AT4G26530,AT4G26555,AT4G26670,AT4G26370,BETA-OHASE1,AT4G25835,AT4G25830,CIL,ACP4,CHLM,AT4G24750,RBP31,HB22,AT4G24810,AT4G24930,CPHSC70-1,AT4G23940,AT4G24090,AT4G24175,AT4G23820,AT4G23670,AT4G23800,CRF2,SP1L5,AT4G22830,AT4G22470,APT3,SMO1-3,BGLU47,AT4G21870,PSBQA,EMB1417,RP1,AT4G20120,PTAC14,IRT2,AK-HSDHII,AT4G19830,IRT1,NCED4,AT4G19410,AT4G19100,CHLI1,SS4,AT4G13220,AT4G12830,STOMAGEN,SKU5,AIR1,CYP706A5,AT4G11190,AT4G11175,AT4G11100,CRK30,AT4G10060,ATPD,RH39,AT4G09050,APX4,EHD2,PSBQ-2,MSRB6,EMB2369,AT4G04330,MEE51,AT4G03100,XTH9,AT4G03150,AT4G02530,AT4G02790,AT4G02850,PSAD-1,AT4G02800,AT4G02990,TOC159,PRL,GH9B13,TROL,AT4G01310,AT1G32080,AT1G25550,HCF173,DAL1,PDLP3,HEME2,AT2G33450,AT2G40480,AT1G17850,CAB3,LHCA6,HEMA1,F2KP,AT1G07050,AT1G18060,AT1G18090,AT1G20810,PGL1,CYP78A5,ATLP-1,AT1G18170,AT1G50900,AT1G56220,EMB2738,EXPA1,AT1G69523,AT1G66820,FAD7,HB33,AT1G75190,AT1G32550,LOL1,AT1G66100,AT1G33290,CYP81D1,AT3G28270,AT3G18890,AT3G52170,CP33,AT3G20680,AT2G34060,AT3G25660,AT3G27180,GHS1,BGAL1,AT3G13740,AT3G22150,AT3G22210,AT3G15190,AT3G15110,AT3G23940,AT3G19030,CYCP2;1,AT3G18960,PSBTN,AT3G13470,FLU,BTS,AT3G20230,AT3G12870,AT3G12900,AT3G28900,HCF101,AT3G23760,AT3G23700,AT3G13180,AT3G13120,XTH16,RALFL24,UGT88A1,AT3G16530,HEME1,RPL12-C,AT3G28130,AT3G15570,AT3G10840,AOC1,AT3G25805,EMB2729,AT3G20370,MYB10,PGK1,AT3G12685,EMB1865,AT3G29230,AT3G18680,CFM3A,AT3G23080,AT3G29185,NAI2,AT3G25190,CCB1,AT3G12930,RFC3,AT3G28460,AT3G25480,AT3G19850,AT3G20820,AT3G19480,AT3G21300,AT3G21260,EMB2083,DELTA-TIP,NDF4,MAD2,RPL15,ATPRXQ,EMB1270,BGLU44,AT3G18050,AT3G15680,AT3G15630,AT3G27750,LHCB2.3,FAD5,AT3G15720,SOL1,MFP1,AT3G14330,AT3G17680,AT3G15520,AT3G15450,AT3G16670,AT3G16560,AT3G17350,AT3G06070,AT3G02640,AT3G02450,AT3G06500,TRXZ,AT3G06980,PTAC3,EMB2458,GASA5,AT3G08030,AT3G08740,LTP6,AT3G09580,AIF1,AT3G04550,AT3G04650,AT3G04760,AT3G03980,AT3G02120,AT3G02060,AT3G05600,AT3G05730,DFC,AT3G10060,PQL1,AT3G08920,PYK10,YLMG1-1,PTAC13,AT3G04790,CA1,CS26,CYP38,AT3G09050,HY2,AT3G11630,AT3G16460,RIF10,MAP1C,HRS1,AT3G16370,NSP3,JAL31,JR1,AT3G16450,AT1G06350,PIP1C,AT1G44000,ARR7,AT1G15710,LHCB6,AT1G28100,LTPG1,GAPB,NAS4,BGLU18,NDF5,TAPX,AT1G77630,AT1G29670,MYB20,AT1G52220,AT1G73600,AT1G72250,AT1G76790,AT1G71500,AT1G72640,AT1G76450,BZIP,AT1G73655,TPPB,BEE3,AT1G78180,AT1G35420,AT1G66430,AT1G33940,AT1G36390,RPS17,TIFY7,AT1G74670,AT1G74370,AT1G68520,PTAC17,AT1G80380,AT1G80440,MURE,FLN2,SP1L2,HEMB1,AT1G74070,AT1G68190,SCPL31,EMB2654,AT2G43530,AT2G43560,AT2G43550,AT2G43535,AT2G43620,AT2G43590,GLYR2,AT1G32470,GSTU20,AT1G49200,AT1G06190,RIP2,TIC110,AT1G43670,AT1G21350,AT1G21500,AT1G29070,BXL2,AT1G12250,ATBETAFRUCT4,AT1G53520,AT1G01320,RPL4,AT1G75460,EMB2184,PRPL11,SCRM2,GAPA-2,AT1G12800,FNR2,AT1G48460,AT1G48570,GATB,LPA19,AT1G18810,NDF6,ATMPK13,AT1G14270,AT1G14345,WHY1,AT1G71720,AT1G63610,AT1G01170,AT1G01080,AT1G49650,AT1G01970,AT1G49975,HIK,AT1G18440,AT1G47400,ALB1,BEE1,SKS5,PSAO,PETE1,CYCB2;4,AT1G76110,NDF1,AT1G16080,AAE14,AT1G11430,TLP8,UBC20,AT1G50450,PDE318,AT1G65870,AT1G22550,AT1G22500,AT1G22430,AT1G22570,AGL87,AT1G64680,AT1G64510,AT1G33810,AT1G33790,AT1G35680,AT1G80030,AT1G56050,CSLD5,AT1G02820,AT1G74730,RPS9,AT1G53800,PTAC2,XYL1,AT1G48350,AT1G53870,AT1G68590,AT1G68670,CRR23,AT1G70820,PAC,AT1G64150,AT1G73120,AT1G73110,EMB1273,AT1G49380,AT1G49500,PTAC6,AT1G21680,AT1G17200,EPF2,AT1G15180,AT1G15140,PDF1A,AT1G14120,PQL2,AT1G14030,AT1G62780,AT1G75960,TY2,3-OCT,CDKB2;2,PAP3,CP5,CCB4,GASA1,AT1G54500,AT1G75690,AT1G23390,MLP423,GRP3S,AT2G05310,PSAD-2,AT1G78460,EMB1473,AT1G65230,UGT75B1,AT1G10522,EMB2004,AT2G38820,AT2G36145,GDU4,LHCB2.2,AT2G17240,AT2G22230,AT2G28605,KCS12,AT2G31730,RAP,CR88,MAX2,LSH10,AT2G17033,PAP7,AT2G01870,MCM4,AT2G04790,CRB,AT1G04420,AT1G60000,AT2G21530,SULA,AT2G21385,AT2G40400,AT2G36885,XTH32,AT2G36835,SIGF,AT2G04360,CPZ,AT2G21860,AT2G21960,APG10,AT2G36570,AT2G35800,AT2G36000,NHL12,PDF1,AT2G21210,AT2G03750,SEP4,CYP79B3,CPN60A,AT1G78995,LUP1,TOC33,AT1G79080,PP2-A5,AT1G02150,TLP18.3,AT1G22700,AT1G22630,AT1G54740,AT1G78820,AT1G78860,TPS8,SRS,ENODL14,GPX1,AT1G11860,GSTU18,AT1G27480,NPGR1,AT1G09390,AT1G09500,AT1G30820,PSAG,UKL3,EMB2394,EXPB2,AMI1,AT1G09750,AT1G09900,AT1G70200,FRO3,SIG2,NPQ1,SYP111,LIN2,PSB27,AT1G23205,ECHID,AT1G60590,AT1G77060,ABC4,AT1G52100,ZKT,CPN60B,TPX2,AT1G62510,AT1G62480,AT1G62500,AT1G51400,AT1G23790,AT2G43030,PSAE-2,AT2G18300,AT2G20670,AT2G20690,AT2G10940,AT2G37130,MEE14,AT2G15960,AT2G05540,GRP-3,PR-1-LIKE,AT2G19970,AT2G25450,AT2G27420,AT2G03420,RPH1,AT2G17972,KCS8,AT2G37470,AT2G37220,AT2G37450,SCA3,SCY1,MOD1,LCR69,AT2G45180,AT2G38870,AT2G27680,XTH4,AT2G28790,AT2G29340,AT2G29310,AT2G29290,AT2G29180,TUB7,AT2G27130,CIPK3,CRR3,MLP329,AT2G41250,AT2G14660,RPB5D,AT2G47840,SYCOARATH,CRR6,DEGP2,AT2G24020,AT2G35260,AT2G24090,AT2G24060,AT2G46220,AT2G14880,SKL2,AT2G35410,OVA4,AUR2,ATCTH,AT2G25830,MIOX2,AT2G46910,EXPA15,CYP707A2,AT2G44920,CDPMEK,CHL-CPN10,AT2G44640,AT2G34620,AT2G45850,AT2G18940,PTAC12,PPL2,JAL22,LHB1B1,SVR1,AT2G32500,PSRP4,CAX1,MES3,PDX1L4,EXP3,AT2G37660,ISPD,AT2G44040,AGP17,SNG1,SCPL13,YCF37,AT2G39920,AT2G44380,EDA3,AT2G33800,AT2G33830,WHY3,PLPB,CYP76C1,AT2G30600,AT2G32640,AT2G32650,AT2G39670,PSBP-2,AT2G30695,AT2G41990,AT2G41950,AT2G26690,AT2G42220,AT2G42110 DIJK_DEHYDRATION-STRESS_UP Up-Further analysis indicated 640 genes increased, their transcript levels by 4-fold or more (p <= 0.001) as result of the dehydration stress. (Table S3 PubmedID:21050490) AT5G13170,AT5G52300,AT5G06760,AT3G17520,AT3G02480,AT1G52690,AT2G47770,AT1G22990,AT1G80160,AT5G59220,AT2G37870,AT5G66780,AT5G59310,AT2G21820,AT1G43160,AT5G05220,AT1G05340,AT4G02360,AT5G66400,AT3G53980,AT3G57010,AT1G16850,AT4G33150,AT3G15670,AT5G50360,AT1G07430,AT4G14090,AT5G43840,AT1G17870,AT2G41190,AT4G02280,AT1G64110,AT1G03940,AT5G59320,AT1G17020,AT3G13672,AT1G69260,AT2G46680,AT1G77120,AT4G09600,AT2G37770,AT4G33550,AT2G42560,AT1G60190,AT4G24000,AT5G53710,AT3G50970,AT5G07330,AT3G46230,AT1G09500,AT2G35300,AT5G52390,AT1G62570,AT5G01300,AT1G67930,AT5G10300,AT3G28007,AT1G04220,AT3G61890,AT4G31830,AT1G68500,AT1G04560,AT1G24600,AT1G57590,AT1G05100,AT1G54120,AT2G25625,AT5G15190,AT1G31750,AT3G14360,AT1G77450,AT2G45570,AT3G24520,AT1G54160,AT4G12580,AT1G14730,AT5G42800,AT3G55970,AT2G29460,AT1G49450,AT1G66390,AT1G01480,AT3G46660,AT5G20830,AT2G19900,AT3G17800,AT5G02020,AT5G54060,AT5G53870,AT4G17030,AT1G02310,AT3G50980,AT4G37430,AT4G33905,AT1G48000,AT1G61800,AT5G17220,AT4G15910,AT5G39520,AT3G13784,AT3G60140,AT2G34850,AT2G43570,AT3G22600,AT2G22470,AT4G22870,AT3G48020,AT2G35090,AT5G44310,AT3G03170,AT1G73040,AT1G07590,AT3G12580,AT3G28270,AT3G12510,AT2G23110,AT5G11110,AT2G02990,AT2G43590,AT4G32920,AT5G45310,AT2G21590,AT1G79900,AT1G56650,AT2G39030,AT2G35730,AT1G52890,AT4G03820,AT1G69480,AT4G20320,AT4G30460,AT5G05410,AT5G25110,AT5G13330,AT5G57050,AT2G33380,AT1G54100,AT1G07500,AT5G01670,AT4G23680,AT3G22620,AT2G29380,AT3G29575,AT1G03790,AT4G39670,AT4G35560,264494_AT,AT1G54870,AT5G62040,AT1G06180,AT5G04010,AT2G36780,AT1G72260,AT5G62480,AT5G10930,AT3G03620,AT5G61820,AT4G23600,AT4G10250,AT5G66460,AT3G08860,AT1G17830,AT3G12960,AT3G11020,AT1G64660,AT3G51860,AT2G20560,AT2G39050,AT5G09530,AT5G01520,AT3G54680,AT1G76590,AT2G04240,AT3G25870,AT1G32560,AT4G34860,AT4G21440,AT2G16990,AT4G23450,AT5G48180,AT2G33590,AT3G57520,AT1G32450,AT1G01250,AT3G11480,AT4G32870,AT1G62620,AT2G38400,AT4G05100,AT3G03480,254414_AT,AT3G29590,AT5G66110,AT5G37550,AT3G03240,AT1G08630,AT3G49130,AT3G03470,AT1G51140,AT1G80110,AT3G16360,AT1G46768,AT4G19390,AT5G42900,AT3G59930,AT1G56600,AT1G11210,AT2G42000,AT3G24750,AT5G14180,AT1G53540,AT4G03320,AT3G16990,AT5G22460,AT1G15100,AT1G62710,AT1G70300,AT1G10070,AT3G53230,AT4G12410,AT1G08650,AT1G05680,AT5G16600,AT5G13820,AT4G34230,AT3G10910,AT1G68570,AT5G02550,AT2G36080,AT5G52310,AT5G02420,AT5G49700,AT1G72770,AT5G15240,AT3G17180,AT3G14560,AT5G04380,AT1G21400,AT3G28290,AT2G17500,AT3G57540,AT4G12430,AT3G27270,AT5G04000,AT5G42290,AT3G09910,AT2G29300,AT2G45210,AT2G39800,AT5G01600,AT5G62150,AT4G34710,AT4G37150,AT5G45630,AT5G04370,AT5G19875,AT1G47960,AT1G74010,AT5G03210,AT4G27410,AT3G17110,AT4G26080,AT2G12290,AT5G67080,AT4G34000,AT2G29350,AT1G30500,AT2G18050,AT4G39210,AT4G18980,AT4G37320,AT5G65280,AT5G51990,AT5G59330,AT1G10690,AT3G14280,AT2G42790,AT5G07990,AT4G10955,AT3G17000,AT5G09640,AT1G65890,AT3G03520,AT2G46270,AT1G74020,AT5G03230,AT3G48350,AT5G37540,AT1G29680,AT4G19230,AT3G22840,AT3G14440,AT1G13990,AT5G41040,AT2G38340,AT5G39610,AT4G12290,AT4G25580,AT2G34610,AT4G13560,AT4G25480,AT5G57910,AT4G37990,AT1G79270,AT5G37300,AT2G37760,AT3G30460,AT3G58540,AT5G37260,AT2G15480,AT5G66170,AT4G16750,AT3G20250,AT5G58380,AT3G49210,AT1G73260,AT1G17745,AT1G63380,AT4G23493,AT2G38465,AT1G52080,AT3G04070,AT4G17280,AT2G16890,AT1G53100,AT5G09520,AT3G03310,AT1G01520,AT3G05640,AT3G62090,AT5G67310,AT2G47780,AT1G01470,AT3G51240,AT1G69490,AT2G47190,AT5G01720,AT4G31240,AT3G44880,AT4G37370,AT3G06810,AT4G14220,AT4G22820,AT3G55940,AT1G05510,AT3G48510,AT1G58360,AT2G40080,AT4G36600,AT5G09930,AT2G34810,AT2G23910,AT3G62590,AT1G09530,AT1G07040,AT5G06510,AT1G68620,AT3G20100,AT5G49690,AT1G23040,AT2G46940,AT5G47550,AT3G49120,AT4G33980,AT5G42500,AT4G23050,AT5G13080,AT1G22370,AT3G11050,AT2G22420,AT1G76790,266155_AT,AT4G09610,AT5G60910,AT1G15960,AT1G19200,AT1G67360,AT1G30220,AT5G04250,AT3G23920,AT3G19390,AT1G55760,AT3G57680,AT3G01100,AT1G67300,AT5G45690,AT5G45890,AT5G13580,AT2G42540,AT3G59820,AT3G03440,AT5G22860,AT5G04660,AT5G53590,AT5G47060,AT4G15610,AT2G45220,AT1G75400,AT4G18280,AT5G51760,AT1G23800,AT5G02640,AT4G38060,AT1G24070,AT3G06420,AT3G60690,AT4G00700,AT4G33540,AT1G02470,AT4G35790,AT5G07080,AT1G54570,AT2G47180,AT5G57900,AT5G62490,AT1G03070,AT5G37500,AT2G31945,AT3G03320,AT5G23050,AT5G17860,AT4G30450,AT1G29330,AT3G09390,AT2G21620,AT1G54020,AT2G38820,AT5G17050,AT1G07720,AT4G21680,AT2G41000,AT4G17550,AT4G31860,AT3G48520,AT2G22510,AT5G13750,AT1G62510,AT5G07920,AT5G40020,AT1G66830,AT2G38530,AT2G21510,AT3G12500,AT1G63010,AT1G79520,AT1G69610,AT1G21790,AT4G13800,AT2G30550,AT1G73010,AT3G61630,AT3G20660,AT3G20300,AT1G01720,AT5G49900,AT3G50400,AT1G52560,AT2G25620,AT1G31820,AT1G08230,AT2G01540,AT3G03550,AT5G47560,AT2G41210,AT2G29090,AT3G20620,AT2G28840,AT1G22985,AT1G21410,AT1G33260,AT4G16690,AT4G30490,AT1G65000,AT5G10650,AT1G63390,AT2G27150,AT2G43580,AT1G63440,AT5G22290,AT2G19810,AT2G24540,AT1G32870,AT5G52640,AT4G17650,AT4G33040,AT1G75170,AT3G19100,AT2G36750,AT3G22200,AT1G77000,AT3G10320,AT2G28110,AT1G79110,AT5G01880,AT2G25890,AT5G51070,AT2G28400,AT5G17850,AT3G15760,AT3G17810,AT3G19620,AT4G01870,AT4G40070,AT1G58270,AT1G27760,AT1G08570,AT1G10585,AT5G24770,AT1G76580,AT1G31830,AT3G16410,AT2G02390,AT3G10340,AT5G64510,AT5G53660,AT2G45600,AT4G15530,AT3G01350,AT5G07950,AT3G20910,AT1G35720,AT1G04830,AT5G65990,AT4G34650,AT5G22470,AT5G18040,AT5G66760,AT3G56260,AT1G20030,AT4G37970,AT5G17380,AT5G03190,AT2G39350,AT3G22830,AT5G15860,AT5G50240,AT3G55310,AT5G25390,AT4G13920,AT5G13310,AT3G11410,AT3G27210,AT5G55180,AT5G03180,AT2G22200,AT4G11350,AT1G17520,AT3G63060,AT5G67340,AT5G09620,AT3G54950,AT4G01430,AT1G20440,AT2G16720,AT1G72680,AT3G51440,AT1G62810,AT3G57020,AT5G10730,AT2G34500,AT3G05630,AT2G41380,AT5G41620,AT5G57610,AT1G53580,AT5G44670,AT5G04530,AT5G14940,AT2G37150,AT3G55890,AT3G24500,AT2G46690,AT2G04350,AT1G29240,AT5G01200,AT2G47890,AT5G66100,AT5G67090,AT2G04160,AT5G65210,AT5G47610,AT2G30140,AT5G29000,AT5G18130,AT1G64380,AT4G30470,AT5G07010,AT5G24870,AT5G59845,AT2G13290,AT4G24960,AT3G63010,AT5G17460,AT1G62030,AT2G27200,AT3G51090,AT5G25770,AT1G69360,AT3G26820,AT1G69310,AT1G62540,AT4G22920,AT3G21750,AT5G24090,AT4G32250,AT1G52410,AT2G39330,AT3G02990,AT1G69295,AT5G25450,AT5G54840,AT1G52100,AT3G04060,AT3G04000,AT3G01650,AT4G22240,AT1G77280,AT5G56520,AT1G09140,AT2G07727,AT4G16760,AT2G04090,AT3G26290,AT5G13880,AT1G24470,AT4G35500,AT2G29500,AT4G15490,AT1G48560,AT4G01960,AT1G27200,AT2G18915,AT5G55560,AT1G55280,AT1G34630,AT4G01610,AT5G01990,AT1G29395,AT3G48690,AT2G25590 DIJK_DEHYDRATION-STRESS_DN Down-Further analysis indicated 525 genes decreased, their transcript levels by 4-fold or more (p <= 0.001) as result of the dehydration stress. (Table S3 PubmedID:21050490) AT5G48540,AT1G19960,AT3G55330,AT5G51720,AT1G68590,AT3G48100,255082_AT,AT3G44990,AT3G57330,AT5G15580,AT1G04680,AT1G11860,AT4G18480,AT2G04780,AT5G54970,AT5G10390,AT5G02200,AT1G63350,AT2G18690,AT3G18710,AT1G66100,AT5G66520,AT4G22570,AT1G78460,AT5G15830,AT1G70410,AT1G04520,AT4G33360,AT4G28660,AT5G26920,AT5G35490,AT2G18660,AT2G40530,AT3G22240,AT4G03190,AT3G13000,AT5G40150,AT1G13210,AT4G16515,AT1G62780,AT4G24930,AT1G80280,AT5G20450,AT4G39640,AT1G17860,AT3G06080,AT5G03380,AT3G54260,AT2G42220,AT3G63110,AT3G44890,AT5G25930,AT5G50740,AT3G12150,AT5G63410,AT3G01860,AT1G73190,AT2G17040,AT2G36120,AT1G72790,AT4G38400,AT4G32830,AT1G68400,AT5G47380,AT1G72520,AT4G21850,AT4G04955,AT1G19150,AT1G52290,AT5G44070,AT5G23060,AT5G51560,AT5G39860,AT3G63140,AT5G42250,AT1G14280,AT5G53880,AT1G29440,AT4G14680,AT4G39970,AT5G11250,AT4G18370,AT1G60590,AT4G17070,AT3G62030,AT5G64120,AT3G56480,AT2G37430,AT3G62110,AT4G33000,AT2G38810,AT2G29180,AT1G33770,AT1G16260,AT3G01480,AT3G13470,AT5G45480,AT5G39020,AT1G18650,AT4G39770,AT2G35880,AT2G23600,AT5G66210,AT3G54810,AT3G48090,AT1G17610,AT4G26690,AT5G52050,AT3G48730,AT1G13110,AT3G19850,AT5G64870,AT3G16690,AT3G28180,AT1G04530,AT5G08030,AT5G19780,AT5G06870,AT1G32470,AT3G28040,AT1G60550,AT1G34760,AT2G16060,AT2G38120,AT5G45930,AT1G29430,AT3G46940,AT5G14740,AT3G15540,AT1G53430,AT3G02110,AT1G75780,AT1G67330,AT2G42610,AT2G26190,AT1G16390,AT5G08260,AT5G60270,AT3G15850,AT1G11670,AT3G45640,AT1G22530,AT5G19120,AT1G19020,AT5G57700,AT3G60320,AT4G34220,AT4G23060,AT2G07690,AT3G48360,AT5G20250,AT4G01680,AT1G05210,AT1G21500,AT5G57780,AT3G52430,AT4G24370,AT3G23530,AT1G11350,AT2G40100,AT5G10760,AT1G24170,AT5G03120,AT4G19985,AT3G18080,AT1G17650,AT1G02360,AT1G25230,AT5G46710,AT5G15350,AT4G25080,AT2G04790,AT3G08920,AT1G48260,AT1G27770,AT5G16590,AT4G30290,AT4G21870,AT5G49740,AT3G46490,AT2G18210,AT1G03850,AT4G17340,AT3G56400,AT1G59590,AT4G37290,AT1G63260,AT1G54820,AT5G13710,AT4G16370,AT3G15570,AT3G52500,AT5G13140,AT4G20780,AT4G36550,AT2G01180,AT1G66160,AT5G54490,AT1G55450,AT1G14290,AT1G05575,AT4G02850,AT1G44830,AT5G27290,AT2G44740,AT5G49160,AT1G18570,AT1G56190,AT2G30990,AT1G72970,AT3G28340,AT4G02540,AT2G13820,AT4G00950,AT1G17700,AT1G76240,AT1G64640,AT5G52100,AT3G59080,AT3G01550,AT3G02380,AT2G34620,AT1G52830,AT3G62150,AT1G67910,AT4G34760,AT2G47930,AT4G08850,AT1G65310,AT1G23205,AT5G66530,AT4G37450,AT2G35960,AT1G07370,AT4G17810,AT1G19380,AT4G38860,AT2G36050,AT4G36670,AT3G14310,AT3G27690,AT5G64410,AT4G37610,AT3G50480,AT5G10400,AT2G15090,AT5G44680,AT3G50560,AT3G54560,AT5G14920,AT5G52760,AT3G01500,AT4G24350,AT2G34930,AT1G34310,AT3G59300,AT4G25050,AT2G02950,AT4G19530,AT2G06925,AT5G57770,AT1G10340,AT1G57990,AT4G30270,AT1G66090,AT1G15000,AT5G07580,AT3G49940,AT3G47570,AT3G01440,AT1G30520,AT5G41750,AT1G77690,AT4G00400,AT1G75820,AT3G28860,AT2G31730,AT5G61440,AT4G12730,AT4G19120,AT2G39870,AT2G36885,AT4G38420,AT1G47400,AT2G03350,AT2G44210,AT1G02640,AT1G75500,AT3G50270,AT1G56430,AT1G65490,AT5G19240,AT1G18250,AT1G75750,AT5G46330,AT3G53190,AT3G49670,AT3G05320,AT1G20010,AT4G39710,AT1G09200,AT3G57930,AT2G35710,AT5G48460,AT3G07470,AT4G36030,AT1G72920,AT2G23130,AT2G41990,AT5G55620,AT1G66970,AT2G32030,AT3G14210,AT1G79720,AT5G12940,AT3G43960,AT4G30020,AT4G00970,AT3G06750,AT4G12980,AT4G23400,AT5G01740,AT3G18890,AT1G27460,AT4G12420,AT4G28190,AT2G30930,AT3G16250,AT3G05490,AT3G22210,AT3G49260,AT4G38660,AT1G09390,AT5G02890,AT2G42380,AT1G33240,AT3G23550,AT2G42580,AT4G11000,AT1G49730,AT5G50915,AT4G31800,AT2G46330,AT5G54380,AT5G55450,AT3G60290,AT4G14365,AT5G24210,AT5G25460,AT4G29740,AT3G52720,AT5G12050,AT2G37640,AT5G05300,AT4G22010,AT4G30410,AT5G28770,AT1G22650,AT2G44500,AT5G40450,AT1G18620,AT5G44130,AT1G29450,AT1G55330,AT1G53520,AT1G22330,AT5G16030,AT1G11850,AT3G09020,AT1G77640,AT3G10520,AT4G34770,AT3G11110,AT2G28630,AT2G02930,AT1G73830,AT1G62480,AT5G59870,AT5G50335,AT4G30610,AT5G54720,AT2G41100,AT1G51940,AT4G14400,AT1G70985,AT5G62630,AT4G16563,AT5G51550,AT1G48480,AT4G32800,AT1G72910,AT1G21270,AT4G25260,AT2G26440,AT3G14840,AT3G07010,AT5G50730,AT1G68840,AT3G16240,AT3G18050,AT1G73600,AT3G06770,AT4G02330,AT3G12110,AT1G49750,AT1G30040,AT5G67450,AT5G51460,AT5G49630,AT2G17880,AT5G45670,AT5G62280,AT5G41080,AT1G23030,AT4G31840,AT4G32280,AT1G72430,AT2G26560,AT2G28950,AT5G20630,AT1G75250,AT3G50060,AT5G25190,AT1G52200,AT3G54920,AT1G33811,AT3G10720,AT2G01300,AT2G24600,AT1G22335,AT4G18970,AT2G47440,AT5G02540,AT3G54400,AT2G27690,AT3G22231,AT3G12610,AT3G16530,AT4G36540,AT4G17490,AT1G11545,AT4G16980,AT5G08330,AT1G75040,AT3G48720,AT1G50040,AT1G23480,AT5G66920,AT4G08040,AT3G04290,AT5G48490,AT2G06850,AT2G33330,AT5G05440,AT5G65390,AT5G02760,AT2G14560,AT4G14130,AT4G37770,AT4G04570,AT3G19680,AT4G37800,AT4G28780,AT5G23210,AT1G52190,AT2G42870,AT3G02170,AT5G20740,AT3G45860,AT3G23730,AT3G16670,AT5G03350,AT1G09750,AT3G22060,AT1G74670,AT4G23290,AT2G40750,AT5G57220,AT1G08930,AT1G06830,AT5G01015,AT1G29660,AT1G10020,AT5G63180,AT2G41090,AT2G25735,AT1G13260,AT1G71880,AT2G21650,AT1G04040,AT3G06070,AT3G05730,AT2G34510,AT5G28630,AT4G23820,AT5G36910,AT3G01290,AT1G06080,AT4G03210,AT5G22580,AT1G72610,AT2G38310,AT1G65390,AT2G17230,AT4G13340,AT3G58120,AT1G66940,AT1G33760,AT2G30010,AT2G18300,AT2G10940,AT5G44020,AT4G30280,AT1G21910,AT4G37240,AT2G40610,AT4G08950,AT1G22690,AT4G17460,AT5G65730,AT3G04210,AT1G35140,AT1G03870 NUMA_AGI-GENE_MOM1_UP AGI genes up-regulated in mom1. (Table S1 PubmedID:20010696) AT1G21910,AT1G35140,AT1G36675,AT1G36680,AT1G38390,AT1G41680,AT2G06917,AT2G10975,AT2G10980,AT2G11778,AT2G11780,AT2G15790,AT2G15815,AT2G17690,AT2G34600,AT3G01345,AT3G19680,AT3G29639,AT3G30843,AT3G42353,AT3G42719,AT3G48360,AT4G04180,AT4G04293,AT4G05636,AT4G06505,AT4G06511,AT4G06586,AT4G06615,AT4G06607,AT4G06718,AT4G06730,AT4G07896,AT4G08950,AT4G32480,AT5G26270,AT5G31302,AT5G32473,AT5G33000,AT5G35146,AT5G35490,AT5G52070 SEHR_INTERNODE_UP Up-Genes preferentially expressed in the internode. (Table S1 PubmedID:20579310) AT3G01500,AT1G30250,AT4G23496,AT5G59320,AT5G38420,AT3G62410,AT1G56600,AT2G38170,AT5G38430,AT3G63160,AT5G14740,AT2G38380,AT5G35480,AT5G09660,AT2G39730,AT1G76960,AT1G02205,AT1G30380,AT1G31330,AT1G44575,AT1G20020,AT5G06530,AT1G64670,AT4G37930,AT1G67090,AT1G68110,AT3G48420,AT5G39160,AT5G35630,AT5G44130,AT5G39110,AT5G39190,AT5G24770,AT1G09340,AT5G36790,AT3G26740,AT5G42235,AT2G42530,AT1G20340,AT1G30260,AT2G46820,AT1G70760,AT1G03130,AT2G22990,AT1G60950,AT1G29440,AT1G61520,AT1G54780,AT1G73310,AT5G23240,AT5G39130,AT1G29450,AT5G54830,AT5G12950,AT3G59845,AT4G38860,AT1G14150,AT1G32080,AT3G14420,AT1G42970,AT1G25440,AT1G70680,AT1G52190,AT3G56010,AT1G03680,AT1G06460,AT1G03630,AT4G28750,AT3G51600,AT1G29420,AT5G66570,AT3G21055,AT4G03280,AT1G72610 SEHR_STEM-BASE_UP Up-Genes preferentially expressed at the stem base. (Table S2 PubmedID:20579310) AT4G27654,AT3G22120,AT3G45970,AT5G44420,AT5G13220,AT3G56700,AT2G34600,AT2G19590,AT1G27030,AT5G17220,AT3G04720,AT5G13140,AT1G45201,AT1G49320,AT3G04290,AT5G48485,AT1G75830,AT3G44260,AT3G53235,AT4G38770,AT2G22500,AT1G70840,AT1G77120,AT5G22490,AT1G64230,AT2G42610,AT1G70830,AT4G10380,AT4G11211,AT1G62480,AT1G76650,AT4G37870,AT4G25470,AT2G06050,AT1G70850,AT4G22212,AT3G22740,AT2G39705,AT1G30135,AT2G26020,AT2G32870,AT4G27652,AT1G49310,AT2G38540,AT3G12610,AT3G10080,AT1G80920,AT3G16500,AT3G57450,AT1G52040,AT3G25780,AT1G05710,AT2G23120,AT1G11580,AT3G02550,AT2G47160,AT3G48100,AT4G37800,AT1G43160,AT1G09750,AT1G65500,AT2G46890,AT3G45160,AT1G61340,AT4G24570,AT1G53885,AT1G15010,AT5G13930,AT1G08680,AT4G27450,AT1G68840,AT3G03270,AT4G34410,AT1G18740,AT4G29780,AT2G42720,AT5G03545,AT5G37770,AT3G08890,AT3G16400,AT3G61190,AT4G08290,AT3G53960,AT3G17185,AT3G47340,AT3G15680,AT2G35290,AT2G44450,AT1G73540,AT5G61600,AT1G31550,AT1G66380 OKAMOTO_DRY-SEED_DN ABA-downregulated genes in dry seeds (Table S3 PubmedID:20579310) AT5G25460,AT5G25190,AT5G20950,AT5G14040,AT5G11420,AT5G08260,AT5G07190,AT5G05290,AT3G46970,AT3G45310,AT3G19820,AT3G16460,AT3G16420,AT3G09260,AT3G03450,AT1G69530,AT1G61800,AT1G26770,AT1G22710,AT1G11580 OKAMOTO_ONLY-ABA2-MUTANT_DRY-SEED_UP Upregulated genes in only aba2 mutant dry seeds (Table S3 PubmedID:20579310) AT5G66920,AT5G66570,AT5G66030,AT5G65020,AT5G63810,AT5G63310,AT5G63140,AT5G62890,AT5G62700,AT5G61130,AT5G60360,AT5G59290,AT5G58960,AT5G57560,AT5G55370,AT5G54270,AT5G53180,AT5G51820,AT5G51750,AT5G49980,AT5G48480,AT5G47190,AT5G47110,AT5G46290,AT5G45670,AT5G45490,AT5G44340,AT5G43830,AT5G43330,AT5G41670,AT5G40880,AT5G39320,AT5G38420,AT5G26260,AT5G24470,AT5G22740,AT5G22500,AT5G19760,AT5G19740,AT5G19340,AT5G17920,AT5G14640,AT5G13870,AT5G13520,AT5G12250,AT5G10840,AT5G09660,AT5G05740,AT5G02490,AT5G02260,AT5G01600,AT5G01590,AT4G39500,AT4G39090,AT4G38970,AT4G38210,AT4G36880,AT4G35785,AT4G35100,AT4G35000,AT4G34300,AT4G33930,AT4G33010,AT4G32460,AT4G30850,AT4G30810,AT4G30650,AT4G30620,AT4G30290,AT4G27720,AT4G27670,AT4G27440,AT4G27280,AT4G26760,AT4G26400,AT4G24670,AT4G24190,AT4G23650,AT4G22280,AT4G21990,AT4G21960,AT4G21280,AT4G18480,AT4G16190,AT4G14960,AT4G12980,AT4G11010,AT4G10380,AT4G04640,AT4G02530,AT4G02380,AT4G01850,AT3G63410,AT3G61580,AT3G61470,AT3G56940,AT3G54890,AT3G53800,AT3G52930,AT3G52880,AT3G48140,AT3G45010,AT3G44990,AT3G29320,AT3G26650,AT3G26060,AT3G25860,AT3G23880,AT3G23820,AT3G23800,AT3G21215,AT3G21090,AT3G20370,AT3G20210,AT3G18130,AT3G16450,AT3G16140,AT3G16100,AT3G15950,AT3G14310,AT3G12610,AT3G12120,AT3G11170,AT3G09440,AT3G08960,AT3G08590,AT3G07650,AT3G05060,AT3G03780,AT3G02630,AT2G47940,AT2G47510,AT2G47450,AT2G45200,AT2G45050,AT2G44160,AT2G44060,AT2G42840,AT2G41560,AT2G41340,AT2G39730,AT2G38540,AT2G37660,AT2G37640,AT2G37270,AT2G37120,AT2G35370,AT2G35130,AT2G34590,AT2G34420,AT2G33630,AT2G32520,AT2G30766,AT2G29980,AT2G28840,AT2G27385,AT2G27190,AT2G26900,AT2G26330,AT2G26250,AT2G26080,AT2G25980,AT2G24280,AT2G24270,AT2G24150,AT2G22170,AT2G21250,AT2G20180,AT2G19800,AT2G15970,AT2G15090,AT2G14890,AT2G07678,AT2G06520,AT2G05790,AT2G05520,AT2G03090,AT1G80640,AT1G80530,AT1G78610,AT1G78370,AT1G78060,AT1G77210,AT1G77200,AT1G76400,AT1G76160,AT1G75780,AT1G74690,AT1G74670,AT1G74470,AT1G71500,AT1G70830,AT1G70480,AT1G68560,AT1G67360,AT1G67090,AT1G66270,AT1G64970,AT1G64680,AT1G64650,AT1G63850,AT1G63460,AT1G62770,AT1G62570,AT1G61520,AT1G60160,AT1G58270,AT1G56580,AT1G55360,AT1G55130,AT1G54410,AT1G54010,AT1G50010,AT1G48630,AT1G47128,AT1G42970,AT1G32470,AT1G32200,AT1G32060,AT1G31330,AT1G30510,AT1G29930,AT1G29920,AT1G29910,AT1G29240,AT1G28290,AT1G23410,AT1G21750,AT1G20340,AT1G20010,AT1G17200,AT1G16920,AT1G14670,AT1G13930,AT1G12000,AT1G11820,AT1G10960,AT1G10690,AT1G10670,AT1G10630,AT1G10200,AT1G09780,AT1G09750,AT1G09210,AT1G08650,AT1G08500,AT1G07890,AT1G06360,AT1G05190,AT1G04820,AT1G04770,AT1G02500,AT1G01610 OKAMOTO_ONLY-ABA2-MUTANT_DRY-SEED_DN Downregulated genes in only aba2 mutant dry seeds (Table S3 PubmedID:20579310) AT5G67080,AT5G61720,AT5G53742,AT5G39880,AT5G28690,AT5G26010,AT5G18470,AT5G15110,AT5G13220,AT5G07410,AT5G06860,AT5G01550,AT4G39130,AT4G20860,AT4G17500,AT4G05120,AT4G04077,AT4G02250,AT3G62170,AT3G48580,AT3G44810,AT3G29670,AT3G28830,AT3G26220,AT3G23240,AT3G21520,AT3G17060,AT3G16530,AT3G14620,AT3G14040,AT3G07850,AT3G07820,AT3G01345,AT3G01270,AT2G47050,AT2G47030,AT2G43590,AT2G39400,AT2G26530,AT1G78850,AT1G78460,AT1G69920,AT1G67105,AT1G51250,AT1G48020,AT1G26410,AT1G26380,AT1G21130,AT1G19610,AT1G11610,AT1G02930,AT1G02920,AT1G02790,AT1G01180 OKAMOTO_ONLY-CYP707A1A2A3-TRIPLE-MUTANT_DRY-SEED_UP Upregulated genes in only cyp707a1a2a3 triple mutant dry seeds (Table S3 PubmedID:20579310) AT5G64510,AT5G55930,AT5G47000,AT5G46050,AT5G44380,AT5G38850,AT5G26700,AT5G24910,AT5G19580,AT5G15450,AT5G12960,AT5G07430,AT4G27670,AT4G25200,AT4G24640,AT4G24000,AT4G22340,AT4G13290,AT4G12400,AT4G10250,AT3G61160,AT3G42640,AT3G28740,AT3G22840,AT3G16910,AT3G14330,AT3G13400,AT3G13390,AT3G05610,AT3G04700,AT2G46240,AT2G30115,AT2G26450,AT2G23900,AT1G77100,AT1G55560,AT1G30190,AT1G29390,AT1G29140,AT1G14420,AT1G04360,AT1G03070 OKAMOTO_ONLY-CYP707A1A2A3-TRIPLE-MUTANT_DRY-SEED_DN Downregulated genes in only cyp707a1a2a3 triple mutant dry seeds (Table S3 PubmedID:20579310) AT5G44460,AT5G19520,AT5G14450,AT5G10120,AT5G07200,AT5G07090,AT5G03670,AT5G01210,AT4G25630,AT4G17390,AT4G09420,AT4G01610,AT3G19800,AT3G14220,AT3G09820,AT3G08030,AT3G01345,AT2G38310,AT2G29090,AT2G21660,AT2G19740,AT1G75240,AT1G60190,AT1G53480,AT1G29980,AT1G13380,AT1G09950 SKIRYCZ_OSMOTIC-STRESS_DIFF Genes involved in the biological processes affected by osmotic stress Expression changes are presented as log (Table 1 PubmedID:19906889) AT5G52300,AT5G52310,AT2G42540,AT5G25610,AT2G42530,AT1G20450,AT2G17840,AT1G01470,AT2G30870,AT4G19120,AT1G01120,AT2G38530,AT2G38540,AT1G02205,AT1G68530,AT1G67730,AT5G20960,AT3G43600,AT5G13930,AT5G08640,AT1G56650,AT2G39200,AT3G45290,AT1G61560,AT2G44490,AT4G01700,AT1G33590,AT3G45640,AT1G59580,AT1G75040,AT4G23810,AT2G38470,AT2G23320,AT5G57220,AT2G30770,AT4G39950,AT2G22330,AT4G31500,AT1G18570 KANNO_DMS4/DRD1_UP Up-Genes differentially regulated in dms4 compared to drd1. (Table S3 PubmedID:20010803) AT2G31380,AT3G12320,AT2G46830,AT5G06980,AT1G01060,AT3G61890,AT5G17300,AT3G02380,AT1G64500,AT2G41260,AT1G65490,AT1G61280,AT1G32900,AT2G15020,AT1G75100,AT5G64940,AT5G45820,AT1G55960,AT2G46450,AT3G21870,AT1G10370,AT1G07180,AT2G37870,AT5G24120,AT4G14690,AT5G60250,AT1G69160,AT5G05340,AT3G21890,AT5G52300,AT3G56080,AT1G07010,AT1G62510,AT3G21670,AT1G48100,AT5G54300,AT5G49700,AT5G59320,AT2G37240,AT1G44446,AT5G15850,AT1G06570,AT3G56290,AT3G59400,AT2G41250,AT3G01060,AT3G18250,AT1G51800,AT1G78290,AT3G01550,AT5G44190,AT3G06750,AT2G21320,AT5G02230,AT3G29810,AT5G13770,AT2G03760,AT5G53970,AT4G20860,AT3G47500,AT4G24700,AT5G42760,AT3G01260,AT3G24170,AT2G31750,AT4G25810,AT5G01520,AT5G46050,AT5G52570,ATCG00790,AT2G22240,AT3G17609,AT2G04050,AT2G40900,AT4G09030,AT1G60590,AT1G56170,AT4G15430,AT4G30460,AT4G22200,AT4G33420,AT4G37560,AT1G64740,AT5G03390,AT5G64170,AT1G05680,AT1G64660,AT5G53550,AT2G44370,AT1G62710,AT5G48000,AT4G21680,AT3G48700,AT5G43450,AT4G26200,AT3G27690,AT1G66100,AT1G23205,AT5G06760,AT2G40460,AT1G73480,AT5G24150,AT2G37460,AT1G72030,AT1G13080,AT3G54500,AT1G17960,AT2G24100,AT3G51920,AT2G16005,AT5G26200,AT4G38960,AT5G66400,AT5G48540,AT2G29340,AT5G24420,AT3G16650,AT3G47420,AT5G65380,AT4G35090,AT3G22370,AT2G04039,AT5G48490,AT5G64120,AT5G26260,AT1G02820,AT1G17050,AT3G12510,AT3G19450,AT1G04250,AT5G13170,AT5G62430,AT1G65500,AT1G74010,AT2G46680,AT1G64780,AT3G21090,AT3G14770,AT1G33110,AT1G44000,AT2G29090,AT3G11900,AT1G52100,AT1G79450,AT2G26800,AT4G23680,AT5G59080,AT3G28220,AT1G23740,AT2G41120,AT1G51140,AT4G37550,AT1G73870,AT1G79270,AT5G23060,AT5G60040,AT5G19875,AT1G53090,AT2G27550,AT4G02360,AT5G64850,AT3G18610,AT3G60080,AT1G70000,AT2G32100,AT4G26860,AT1G21410,AT2G41290,AT5G43150,AT1G15380,AT3G29970,AT3G09600,AT3G53420,AT1G58360,AT2G05620,AT2G29650,AT5G16030,AT3G62260,AT1G26560,AT4G25700,AT5G19850,AT5G15950,AT1G20160,AT3G29250,AT4G02280,AT5G63750,AT4G25020,AT1G64970,AT2G39200,AT3G21250,AT4G28290,AT2G26080,AT1G80820,AT3G23210,AT3G57380,AT3G15760,AT1G64860,AT3G26570,AT2G48020,AT2G02990,AT5G06530,AT2G19650,AT3G52360,AT1G68570,AT1G55910,AT4G27940,AT5G53370,AT3G61430,AT4G14550,AT1G75180,AT1G26420,AT1G29460,AT2G39380,AT4G30450,AT5G02840,AT5G35460,AT1G80760,AT1G05300,AT2G43570,AT5G11410,AT5G47560,AT5G42100,AT1G68440,AT5G19730,AT3G13040,AT1G71040,AT3G03890,AT3G46700,AT4G26850,AT1G66330,AT3G53650,AT5G12880,AT2G31980,AT2G41040,AT5G25130,AT3G63380,AT3G59060,AT3G46280,AT4G19170,AT1G23550,AT1G16730,AT1G06040,AT5G67030,AT1G01520,AT3G47340,AT3G17510,AT3G19200,AT5G04190,AT4G36430,AT5G58350,AT4G30110,AT4G02330,AT5G54130,AT5G09930,AT1G51820,AT2G33710,AT3G17800,AT2G33380,AT3G18400,AT1G73650,AT3G16800,AT5G06190,AT3G08040,AT1G10740,AT2G35060,AT2G18190,AT1G14280,AT2G26690,AT4G15210,AT4G37990,AT1G13650,AT3G59340,AT4G34000,AT1G51420,AT4G17840,AT5G12110,AT1G08940,AT1G60190,AT1G70250,AT3G17040,AT1G26390,AT2G47770,AT1G50420,AT3G27350,AT1G65870,AT2G32150,AT1G79520,AT2G37760,AT1G64200,AT2G04070,AT1G03610,AT5G35970,AT5G67340,AT4G22470,AT5G66240,AT1G61820,AT2G36830,AT5G64930,AT4G28390,AT2G05540,AT5G48430,AT2G27420,AT5G50260,AT5G24600,AT4G33550,AT4G08590,AT4G37150,AT3G25190,AT1G63440,AT3G43600,AT2G36630,AT1G71890,AT4G38850,AT5G13090,AT4G37760,AT3G53480,AT5G67310,AT4G16980,AT5G07690,AT2G18050,AT2G30490,AT4G17245,AT1G32870,AT5G64840,AT1G78340,AT2G43660,AT1G69880,AT3G16450,AT5G43850,AT4G00750,AT3G02870,AT5G58860,AT2G36870,AT4G32650,AT2G38530,AT3G48140,AT4G05020,AT1G19450,AT5G24380,AT2G29350,AT1G78510,AT3G57040,AT1G58290,AT1G07700,AT3G10910,AT5G57660,AT2G33590,AT4G30280,AT5G27350,AT2G47490,AT3G56940,AT4G11190,AT2G21560,AT5G14880,AT1G66130,AT1G17020,AT5G58870,AT4G32770,AT3G06760,AT4G31730,ATMG00660,AT1G66760,AT5G06720,AT3G61220,AT1G07500,AT5G67160,AT5G47550,AT4G32190,AT2G21830,AT1G75450,AT5G24760,AT2G21330,AT5G03555,AT4G34610,AT3G51670,AT1G74560,AT2G20670,AT4G11570,AT5G49520,AT3G02150,AT5G54160,AT5G50100,AT3G53260,AT5G42830,AT1G04530,AT5G57785,AT4G00430,AT4G30290,AT4G16690,AT1G52690,AT4G35110,AT4G27450,AT1G51680,AT2G42360,AT1G09560,AT1G35560,AT1G47530,AT5G23220,AT1G06080,AT3G23920,AT5G62130,AT5G48070,AT4G37180,AT1G50290,AT4G27860,AT2G24150,AT5G15450,AT2G41280,AT2G28110,AT4G24140,AT5G47050,AT2G24270,AT1G34180,AT3G10720,AT1G29450,AT3G45970,AT4G28940,AT1G21060,AT2G39450,AT4G15610,AT3G16520,AT2G27660,AT5G02120,AT1G30160,AT5G39580,AT1G49910,AT1G21590,AT3G08690,AT4G39480,AT5G04950,AT5G47990,AT5G18670,AT4G20000,AT5G22390,AT1G19920,AT2G43330,AT1G03590,AT5G52900,AT2G41630,AT5G25610,AT1G51790,AT5G65990,AT5G25120,AT5G56860,AT3G56170,AT3G57020,AT4G23630,AT1G04350,AT2G39310,AT2G26170,AT1G06410,AT5G51940,AT3G56490,AT4G12980,AT1G14290,AT3G25585,AT5G67330,AT3G16175,AT5G12050,AT2G37970,AT5G13640,AT5G16830,ATCG00065,AT4G17800,AT1G19730,AT3G08730,AT1G64720,AT5G64905,AT3G48100,AT5G14640,AT1G05340,AT5G24870,AT3G05180,AT5G64060,AT2G34460,AT3G22640,AT2G16070,AT3G19480,AT1G20650,AT1G01490,AT2G45960,AT2G47450,AT3G10420,AT1G18460,AFFX-AThal-GAPDH_M_s_AT,AT5G48010,AT4G39675,AT5G53820,AT2G31570,AT1G66230,AT1G20350,AT5G18270,AT5G57900,AT3G02790,AT1G03055,AT3G59700,AT4G38840,AT3G05900,AT5G19550,AT4G16370,ATCG00080,AT3G19380,AT5G46800,AT2G44060,AT1G73220,AT1G17360,AT3G22840,AT3G54900,AT4G30993,AT4G13660,AT5G47610,AT2G01570,AT5G05270,AT3G20660,AT1G68620,AT1G72770,AT1G74470,AT3G17130,AT1G20120,AT1G31290,AT3G54510,AT1G79770,AT2G42220,AT3G03770,AT1G28130,AT5G62140,AT3G54580,AT1G07610,AT3G57520,AT3G53980,AT1G76100,AT1G76930,AT5G13630,AT5G15830,AT3G16440,AT3G49780,AT1G62290,AT4G17530,AT2G43290,AT1G55920,AT3G02470,AT5G42070,AT3G19270,AFFX-CreX5_AT,AT5G36910,AT3G30510,AT5G65850,AT5G59220,AT1G01620,AT5G47700,AT4G37310,AT3G27380,AT4G21800,AT1G29660,AT5G13490,AT5G23840,AT1G21460,AT5G57345,AT5G52420,AT1G75810,AT4G10330,AT3G05020,AT1G24530,AT2G29500,AT3G48580,AT1G79600,AT5G01820,AT2G18260,AT2G38870,AT1G76560,AT1G50020,AT4G18700,AT4G33666,AT2G34620,AT2G30150,AT2G39210,AT5G25450,AT5G23730,AT2G04040,AT5G09530,AT5G54470,AT3G52340,AT4G34350,AT1G45688,AT1G26930,AT4G04850,AT1G66160,AT5G59750,ATCG00360,AT1G29510,AT5G49480,AT5G03080,AT4G17550,AT1G70610,AT5G24160,AT1G70580,AT2G01120,AT3G27400,AT5G20110,AT1G53580,AT4G15560,AT5G65660,AT1G32520,AT1G05690,AT3G13980,AT2G24780,AT5G10210,AT4G12500,AT3G06780,AT1G69480,AT5G01300,AT2G29670,AT1G71030,AT2G35840,AT3G28270,AT4G13010,AT2G40890,AT2G14890,AT3G14690,AT1G66880,AT3G04520,AT2G35260,AT5G59780,AT5G02020,AT5G66750,AT3G51895,AT3G11670,AT2G30520,AT3G27050,AT1G74710,AT4G39800,AT5G13930,AT5G37550,AT1G78050,AT3G26000,AT1G21790,AT4G18650,AT5G54870,AT1G27970,AT2G44380,AT4G13180,AT3G18490,AT3G08590,AT5G66040,AT5G56150,AT5G38900,AT5G18770,AT2G30080,AT5G13080,AT3G11280,AT1G69570,AT1G69700,AT2G01850,AT3G47250,AT5G15910,AT5G24280,AT5G57840,AT5G39660,AT3G06570,AT1G35140,AT4G04490,AT4G17180,AT4G15910,AT2G04690,AT5G45280,AT1G66240,AT5G08040,AT2G27080,AT2G35290,AT4G18300,AT2G29290,AT4G21580,AT3G45730,AT1G22840,AT1G31920,AT5G24530,AT1G80160,AT3G27090,AT5G47040,AT5G64080,AT4G15530,AT5G58590,AT2G44620,AT1G05490,AT5G53870,AT5G66740,AT2G39010,AT5G15350,AT2G25900,AT3G03370,AT4G38860,AT5G17050,AT2G47440,AT2G30550,AT5G53120,AT5G57240,AT2G16570,AT1G44760,AFFX-AThal-25SrRNA_s_AT,AT2G36950,AT5G54660,AT1G70140,AT5G01870,AT4G01680,AT2G20750,AT4G08300,AT5G38340,AT4G38130,AT1G47400,AT5G39850,AT3G46900,AT5G42990,AT2G16060,AT4G03260,AT2G42690,AT1G78000,AT2G22990,AT4G37900,AT5G62480,AT2G38810,AT2G21600,AT5G40890,AT5G11100,AT1G61660,AT4G31470,AT4G26690,AT1G15100,AT3G14700,AT2G24280,AT5G09650,AT3G55470,AT2G25080,AT4G38060,AT2G16430,AT2G47000,AT2G39530,AT4G01630,AT1G13590,AT4G11130,AT3G47295,AT5G28030,AT1G30700,AT4G22380,AT5G65870,AT3G16460,AT1G54100,AT3G61580,AT3G01180,AT5G16760,AT5G42810,AT1G04550,AT4G37830,AT3G61440,AT5G05130,AT5G42590,AT2G21820,AT3G55430,AT3G23570,AT2G21970,AT3G26920,AT3G27280,AT3G18280,AT5G17600,AT1G69530,ATCG00280,AT1G42550,AT3G04120,AT1G17180,AT4G20870,AT4G36040,AT3G15810,AT2G38400,AT1G08570,AT1G12880,AT5G67300,AT2G46800,AT4G21620,AT1G28960,AT2G33250,AT3G21600,AT1G73260,AT3G01420,AT1G09815,AT1G09310,AT4G33560,AT1G07450,AT4G19460,AT4G10040,AT2G41780,AT1G51650,AT5G61820,AT3G26210,AT5G58070,AT5G63950,AT3G22160,AT3G25900,AT2G21180,AT4G01910,AT4G32810,AT5G60850,AT3G14067,AT4G35970,AT1G24735,AT5G44380,AT2G33530,AT2G25680,AT3G44610,AT5G21090,AT1G52550,AT1G22850,AT2G04795,AT3G45600,AT2G30500,AT3G02240,AT5G20070,AT1G11700,AT1G14345,AT1G68765,AT1G61790,AT3G15790,AT5G17980,AT4G16240,AT4G12470,AT2G01140,AT1G03770,AT4G27700,AT2G18700,AT1G80450,AT5G52920,AT1G15180,AT5G19760,AT4G35540,AT1G29610,AT3G11690,AT1G12900,AT2G21640,AT3G16990,AT4G19130,AT1G09380,AT5G61670,AT4G38080,AT3G14650,AT5G03760,AT5G11650,AT4G25050,AT1G44970,AT5G11090,AT1G49470,AT1G78320,AT2G28510,AT5G60970,AT2G25200,AT3G22550,AT1G75280,AT1G76490,AT5G61340,ATCG00070,AT3G28500,AT4G39950,AT5G60260,AT1G72300,AT3G50830,AT4G21810,AT3G29240,AT4G25080,AFFX-AThal-GAPDH_5_s_AT,AT1G72810,AT1G03440,AFFX-r2-AT-GAPDH-3_s_AT,AT3G52230,AT5G55070,AT4G30530,AT4G34640,AT5G23820,AT2G41010,AT3G61630,AT1G44350,AT1G65690,AT3G07700,AT3G54400,AT1G64170,AT5G47120,AT5G17310,AT3G01410,AT2G20720,AT3G24460,AT5G15090,AT2G34790,AT1G68450,AT3G47620,AT3G14395,AT3G14760,AT2G43420,AT2G17740,AT3G15950,AT3G09260,AT4G36770,AT3G05950,AT1G56010,AT1G58270,AT5G45410,AT1G31300,AT5G28750,AT3G50340,AT1G12000,AT3G24190,AT5G61890,AT3G12110,AT2G21200,AT1G77090,AT1G64620,AT3G15850,AT2G28200,AT1G49430,AT1G55020,AT1G65510,AT5G19970,AT5G57620,AT1G64850,AT5G39520,AT4G21940,AT1G14550,AT5G03380,AT3G20390,AT1G48600,AT4G31130,AT4G22920,AT1G49150,AT1G04220,AT3G16670,AT4G16140,AT2G46750,AT5G24930,AT3G09270,AT1G69260,AT5G37990,AT2G24570,AT1G37130,AT1G06430,AT5G63600,AT1G21910,AT1G13330,AT3G59940,AT3G53040,AT2G40610,AT5G09570,AT3G23250,AT2G42840,AT5G36160,AT3G16860,AT4G37910,AT2G43710,AT5G40480,AT4G33080,AT1G01050,AT3G03840,AT1G02500,AT3G51730,AT3G12580,AT2G38860,AT2G32090,AT4G08230,AT2G40200,AT4G27000,AT2G40970,AT1G56580,AT5G04890,AT5G45950,AT5G12930,AT1G29440,AT4G22820,AT4G30270,AT3G54660,AFFX-r2-AT-GAPDH-5_s_AT,AT3G27240,AT3G53210,AT5G13420,AT3G58550,AT5G12470,AT2G23120,AT2G25940,AT3G04980,AT4G11330,AFFX-BioBM_AT,AT2G15000,AT5G44530,AT5G11770,AT5G41050,AT1G03860,AT4G21120,AT1G66830,AT1G77380,AT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50,AT2G31670,AT1G76090,AT2G41110,AT5G56760,AT3G50930,AT3G12760,AT1G78060,AT1G24575,AT5G60360,AT2G45640,AT3G15720,AT3G09770,AT3G26290,AT1G06450,AT5G49690,AT4G38920,AT3G28740,AT1G60000,AT5G63700,AT5G15320,AT5G02820,AT1G06620,AT4G20150,AT4G39330,AT1G75220,AT1G80460,AT5G48930,AT3G63110,AT1G08700,AT5G65830,AT3G01620,AT1G18540,AT1G06520,AT3G24100,AT4G15545,AT1G54120,AT1G62480,AT3G16340,AT2G22860,AT3G56980,AT4G24330,AT5G65260,AT1G06650,AT5G07660,AT1G22750,AT5G17560,AT3G20710,AT5G38030,AT4G16480,AT3G62130,AT1G24180,AT1G01480,AT5G24800,AT4G08410,AT1G24600,AT5G46350,AT1G10410,AT5G01540,AT1G73920,AT4G17880,AT5G38480,AT1G17860,AT1G75830,AT1G23530,AT1G79550,AT5G57090,AT2G45820,AT5G27770,AT1G05410,AT5G58380,AT4G05050,AT3G26520,AT1G52200,AT2G02050,AT4G27435,AT3G20500,AT1G53830,AT2G37860,AT5G43180,AT4G40030,AT1G66260,AT5G10450,AT2G27720,AT1G04800,AT5G67370,AT3G04070,AT2G33540,AT1G65570,AT2G03200,AT1G64770,AT4G23700,AT5G20500,AT4G02720,AT5G04850,AT4G31870,AT5G47870,AT5G17230,AT4G34670,AT1G52990,AT1G34030,AT5G23900,AT3G01590,AT1G36380,AT3G51000,AT1G11850,AT4G34200,AT3G55280,AT5G07800,AT2G33340,AT4G23670,AT5G51890,AT4G40020,AT5G58710,AT3G07910,AT2G32660,AT3G21500,AT2G21510,AT3G47510,AT4G38510,AT2G36880,AT1G18060,AT3G15570,AT2G18180,AT4G05160,AT1G75330,AT4G15000,AT5G45130,AT5G10480,AT2G24970,AT3G24770,AT3G07430,AT4G37130,AT3G56150,AT3G52300,AT4G13170,AT1G52340,AT1G12820,AT3G54420,AT3G24450,AT5G65720,AT1G78300,AT1G01100,AT1G18990,ATCG00740,AT1G06760,AT3G16500,AT4G29130,AT4G05060,AT1G78670,AT2G43810,AT5G20090,AT5G49280,AT2G45990,AT1G69295,AT4G39230,AT2G23130,AT2G24590,AT1G23870,AT2G27470,AT5G65170,AT3G04840,AT1G32220,AT3G05590,AT5G51260,AT2G18780,AT3G04110,AT2G24420,AT3G19460,AT5G25900,AT3G26744,AT5G56350,AT1G32580,AT5G42960,AT2G33410,AT5G23000,AT5G16390,AT4G34720,AT5G65470,AT3G10920,AT2G29310,AT5G03230,AT2G18300,AT5G49720,AT1G22650,AT1G04270,AT5G03190,AT4G15930,AT1G07080,AT5G08290,AT2G27310,AT3G10740,AT1G31070,AT5G10400,AT2G41530,AT4G04960,AT1G47128,AT2G26290,AT3G57510,AT4G21470,AT1G09740,AT1G30660,AT3G19210,AT4G08290,AT5G24850,AT4G09300,AT5G53110,AT3G11780,AT3G55800,AT1G05940,AT1G48850,AT3G13790,AT2G43620,AT5G01840,AT1G74590,AT1G62390,AT2G43090,AT3G19760,AT1G05900,AT5G07080,AT2G17360,AT5G41040,AT2G30250,AT1G10170,AT3G48920,AT4G20440,AT5G46250,AT5G66730,AT1G76240,AT1G51980,AT4G33220,AT3G19290,AT5G21105,AT1G60140,AT3G28200,AT1G16180,AT5G02830,AT5G51110,AT3G08630,AT5G02450,AT5G09480,AT5G63130,AT2G14910,AT3G60010,AT2G33370,AT5G56980,AT1G77940,AT2G48090,AT1G17830,AT5G28060,AT3G52730,AT2G34560,AT3G09570,AT1G18070,AT3G02050,AT1G31130,AT3G16060,AT5G18200,AT2G45290,AT5G38650,AT1G50250,AT1G19610,AT1G69400,AT5G49000,AT4G38800,AT4G18970,AT2G24180,AT5G60790,AT1G08510,AT4G14320,AT5G24650,AT1G72540,AT3G53020,AT4G18480,AT5G06060,AT1G34760,AT3G10930,AT3G12350,AT4G27730,AT5G60530,AT3G55050,AT1G07510,AT5G58110,AT2G29440,AT1G75590,AT2G41420,AT2G45220,AT4G01720,AT5G16110,AT3G52930,AT5G62210,AT2G21580,AT3G30460,AT5G37770,AT2G04630,AT1G27980,AT3G51250,AT5G51040,AT2G24200,AT3G48560,AT4G28440,AT5G04530,AT2G37410,AT5G01650,AT5G63380,AT3G02540,AT4G27090,AT1G17190,AT2G23930,AT3G06080,AT1G67080,AT1G65290,AT2G35300,AT3G22060,AT2G37900,AT3G25520,AT4G34220,AT5G14740,AT1G32050,AT3G57290,AT1G14120,AT5G49640,AT1G01610,AT3G60690,AT5G64530,AT3G52720,AT2G38540,AT1G02816,AT5G53300,AT3G23430,AT2G43670,AT3G26650,AT5G01350,AT2G17520,AT1G01090,AT3G26710,AT2G32830,AT5G54900,AT1G15740,AT1G03660,AT5G10980,AT3G15880,AT1G70940,AT3G20100,AT5G38780,AT3G28580,AT4G24120,AT4G17620,AT4G00860,AT4G10050,AT2G03820,AT5G20060,AT5G48150,AT3G56820,AT5G56080,AT5G07440,AT3G14280,AT1G10900,AT3G45980,AT3G21310,AT1G78080,AT1G11840,AT5G53830,AT4G37580,AT3G62190,AT3G52880,AT4G22570,AT5G59850,AT1G57820,AT1G17210,AT1G79590,AT4G21070,AT3G50820,AT4G34180,AT1G53210,AT1G23190,AT1G54110,AT2G38340,AT3G27340,AT4G26110,AT5G10160,AT2G01890,AT1G52760,AT4G11650,AT4G02930,AT5G44050,AT5G25820,AT5G23760,AT2G22510,AT4G36640,AT1G68150,AT5G39950,AT3G51880,AT5G47770,AT5G48590,AT5G20920,AT4G37170,AT2G26480,AT3G59810,AT4G15940,AT4G01080,AT5G54430,AT2G44065,AT5G13180,AT3G07350,AT4G33070,AT3G23600,AT2G34730,AT3G61110,AT5G46730,AT1G79720,AT4G24930,ATCG00040,AT5G48485,AT2G35635,AT3G08640,AT1G65730,AT3G10090,AT1G74880,AT4G23220,AT5G46190,AT3G48570,AT1G74440,AT1G49160,AT1G22980,AT5G40010,AT4G08850,AT1G73110,AT5G43260,AT2G39780,AT5G24090,AT5G59910,AT5G04120,AT3G16910,AT5G47980,AT2G05790,AT5G56600,AT2G43610,AT5G54580,AT2G25450,AT1G75600,AT4G35040,AT2G38820,AT3G45530,AT4G26160,AT3G61140,AT5G18600,AT1G10010,AT5G59240,AT1G09250,AT2G28950,AT3G04790,AT5G63400,AT1G69410,AT4G20390,AT3G17380,AT3G10190,AT3G50910,AT5G42580,AT5G49660,AT1G27530,AT2G19190,AT5G17330,AT1G77570,AT1G60710,AT3G13520,AT4G21110,AT5G11930,AT4G32470,AT4G34160,AT1G13400,AT4G10450,AT4G37610,ATCG00550,AT1G59740,AT3G13920,AT2G39350,AT2G38420,AT3G13950,AT4G30190,AT2G04350,AT3G09840,AT1G76130,AT1G29150,AT5G61460,AT5G15130,AT3G02530,AT3G07110,AT4G24780,AT5G01550,AT2G21900,AT5G52660,AT5G47210,AT5G40960,AT3G06650,AT4G14020,AT2G20490,AT4G33010,AT3G05320,AT4G22890,AT2G44210,AT5G61260,AT2G37740,AT1G03070,AT4G01920,AT4G24260,AT3G26280,AT4G14970,AT3G62290,AT1G56700,AT1G18630,AT3G59280,AT3G22320,AT4G00810,AT4G09320,AT1G11680,AT2G41380,AT1G78580,AT5G65280,AT5G35160,AT2G18160,AT2G44350,AT1G36980,AT4G09980,AT1G20830,AT1G56430,AT5G05640,AT1G70160,AT4G17830,AT2G20360,AT2G44100,AT3G03270,AT3G22440,AT5G19900,AT5G57350,AT5G16010,AT3G55440,AT1G62180,AT4G02230,AT1G71980,AT1G14320,AT3G19580,AT2G03680,AT1G44130,AT3G44430,AT1G56330,AT3G12300,AT3G50880,AT1G46264,AT3G13090,AT1G74450,AT5G26710,AT5G09590,AT4G22960,AT5G05370,AT3G17440,AT3G26830,AT4G12030,AT5G08060,AT5G25440,AT5G05700,AT3G19590,AT1G34000,AT2G18120,AT3G10880,AT1G14780,AT4G23100,AT5G64260,AT3G15990,AT5G20350,ATCG00820,AT2G01470,AT1G19380,AT5G63310,AT3G48610,AT3G18130,AT5G56100,AT2G21270,AT4G16000,AT3G50360,AT1G27310,AT4G27230,AT5G06630,AT4G14800,AT3G28340,AT1G23140,AT2G30620,AT1G10960,AT1G07770,AT1G62750,AT1G07370,AT5G59845,AT4G39955,AT2G47550,AT5G46230,AT1G77710,AT5G52650,AT4G04210,AT4G12650,AT3G15310,AT3G27190,AT3G27660,AT5G03160,AT3G11800,AT5G54640,AT1G14330,AT5G43560,AT1G18900,AT5G45620,AT1G61740,AT3G46560,AT3G13870,AT3G19950,AT5G56090,AT3G04920,AT5G25160,AT1G54780,AT5G40770,AT4G00720,AT1G60960,AT5G18630,AT2G05380,AT2G36930,AT3G01820,AT5G43380,AT5G24030,AT2G46310,AT2G16510,AT1G53790,AT2G23670,AT5G09920,AT4G34265,AT4G37470,AT1G17620,AT1G47260,AT2G45190,AT3G52920,AT5G40780,AT5G10140,AT1G20070,AT1G77640,AT4G31520,AT1G14610,AT4G21790,AT1G06550,AT1G03150,AT3G60820,AT5G02870,AT5G48410,AT4G36700,AT3G15710,AT3G15770,AT3G13650,AT4G34870,AT1G67940,AT4G14210,AT4G36220,AT3G18710,AT2G34310,AT1G27290,AT4G21326,AT2G19750,AT2G29080,AT2G22470,AT4G17170,AT3G58170,AT4G26710,AT5G19910,AT3G14720,AT5G63150,AT1G69450,AT1G48830,AT4G32150,AT5G28050,AT4G03320,AT5G38630,AT1G23030,AT1G64980,AT1G64090,AT3G05090,AT2G41480,AT3G08030,AT1G52140,AT4G24110,AT4G23190,AT3G25860,AT3G05560,AT3G15180,AT3G23830,AT5G65480,AT5G55050,AT2G30050,AT4G31720,AT2G43780,AT4G23650,AT5G05960,AT2G19760,AT5G17630,AT5G45830,AT5G18850,AT5G22880,AT5G63030,AT5G20620,AT1G73340,AT3G01890,AT1G67980,AT4G39790,AT5G41600,AT3G50070,AT3G02880,AT3G56340,AT3G09630,AT2G28790,AT3G58200,AT4G33360,AT2G47070,AT5G05110,AT4G31300,AT2G42760,AT3G18740,AT3G27820,AT4G14900,AT3G12800,AT1G20580,AT2G31200,AT1G06640,AT5G60160,AT2G46760,AT1G73680,AT3G20570,AT5G11520,AT5G17450,AT5G24655,AT1G32940,AT3G56950,AT1G03870,AT3G06890,AT5G55470,AT5G61960,AT1G71090,AT1G28200,AT4G17390,AT1G34190,AT2G18450,AT4G34540,AT4G02890,AT2G25070,AT5G38470,AT1G51200,AT3G24550,AT2G33210,AT1G02850,AT3G04400,AT3G27430,AT4G10840,AT4G35800,AT1G36060,AT3G43720,AT1G75390,AT4G02390,AT2G27500,AT3G17810,AT5G58420,AT3G49130,AT3G06060,AT4G30790,AT2G40400,AT1G70520,AT5G12010,AT1G77180,AT1G65295,AT5G11280,AT1G79870,AT3G27540,AT3G26450,AT1G65820,AT3G50270,AT1G73230,AT2G45470,AT3G12700,AT1G29900,AT4G13195,AT3G03100,AT3G10770,AT5G58375,AT5G55200,AT1G14810,AT5G66120,AT4G31180,AT4G31330,AT5G63760,AT5G04200,AT3G61550,AT4G34970,AT2G45160,AT3G26220,AT1G14240,AT2G37060,AT5G47880,AT3G06860,AT1G64520,AT3G23090,AT3G02820,AT2G05990,AT3G55120,AT5G59870,AT4G01450,AT4G09500,AT3G25780,AT4G18360,AT5G16270,AT5G40690,AT1G61760,AT5G40980,AT5G16130,AT2G27450,AT1G71200,AT2G14210,AT1G55480,AT5G50850,AT1G26880,AT5G13740,AT1G73590,AT3G13200,AT4G00390,AT5G49350,AT2G31090,AT2G14900,AT1G48450,AT4G30330,AT1G03350,AT5G18810,AT1G80230,AT1G25490,AT3G61180,AT2G47170,AT3G13730,AT3G09810,AT1G15720,AT1G64230,AT5G49810,AT1G69920,AT1G31910,AT3G62840,AT3G56800,AT2G27710,AT3G15352,AT3G08860,AT3G04000,AT5G23580,AT5G51030,AT2G37280,AT5G61640,AT5G35680,AT5G16990,AT2G40100,AT1G74790,AT2G41840,AT5G52860,AT3G22800,AT4G11800,AT4G16330,AT2G29120,AT1G29260,AT5G48580,AT5G42790,AT4G16450,AT5G24230,AT5G08530,AT4G32390,AT3G12370,AT4G10480,AT1G02870,AT3G01120,AT4G33660,AT5G27700,AT1G72160,AT1G48900,AT5G09990,AT3G21520,AT1G78040,AT1G14000,AT4G39770,AT2G29700,AT5G22730,AT2G20420,AT2G22640,AT4G22070,AT5G59770,AT3G10860,AT5G67590,AT1G64880,AT4G23280,AT3G08610,AT1G24510,AT4G29030,AT1G35910,AT5G44980,AT3G06050,AT1G68660,AT3G01130,AT1G12800,AT2G29400,AT3G45210,AT2G33040,AT4G01850,AT4G17600,AT3G16310,AT1G08110,AT4G27150,AT5G55160,AT1G07360,AT5G03880,AT2G35736,AT2G40370,AT2G04030,AT5G63905,AT5G01500,AT1G77540,AT3G09735,AT1G13370,AT1G68120,AT3G27060,AT5G59160,AT5G13780,AT1G02220,AT5G62680,AT1G04480,AT3G51850,AT1G14950,AT4G02450,AT2G42680,AT1G61340,AT2G43970,AT5G55320,AT4G26630,AT3G09200,AT1G30510,AT3G01280,AT1G64040,AT3G11330,AT1G76900,AT1G18870,AT1G28580,AT3G51800,AT1G79470,AT1G30630,AT1G79610,AT4G15900,AT1G31340,AT2G33630,AT1G64220,AT1G49570,AT3G02520,AT4G25570,AT1G18860,AT3G51160,ATCG01020,AT3G29080,AT3G03070,AT4G36540,AT3G15020,AT5G64240,AT1G17170,AT3G48850,AT5G18240,AT5G27150,AT3G48680,AT2G36210,AT1G08360,AT1G31650,AT2G21290,AT2G16460,AT5G51460,AT2G30110,AT5G53580,AT2G38905,AT2G16630,AT4G39670,AT5G35940,AT5G58090,AT1G24360,AT1G74100,AT5G39740,AT3G22230,AT5G47360,AT3G54300,AT1G59660,AT3G20960,AT4G14060,AT3G46040,AT1G19250,AT1G70770,AT3G53680,AT2G15780,AT4G39510,AT5G06850,AT1G43910,AT1G13710,AT2G34080,AT1G15980,AT4G18910,AT2G39960,AT2G07680,AT2G43460,AT5G55400,AT2G03130,AT5G05140,AT5G18620,AT5G64290,AT2G37570,AT1G06110,AT1G17550,AT2G34250,AT2G32940,AT1G49820,AT1G20950,AT5G23740,AT1G80380,AT1G36390,AT2G37110,AT1G16370,AT3G53500,AT1G51080,AT3G48930,AT1G72800,AT4G04320,AT3G50000,AT2G35150,AT5G45350,AT2G05710,AT5G04740,AT5G35360,AT1G51580,AT5G20720,AT2G15290,AT1G76860,AT2G25910,AT2G46520,AFFX-AThal-Actin_M_AT,AT2G33740,AT2G34480,AT3G51260,AT5G02780,AT4G34050,AT3G52590,AT5G60620,AT5G58060,AT1G01290,AT5G13710,AT4G20980,AT2G35980,AT3G01790,AT2G46230,AT1G63660,AT1G65930,AT5G38040,AT5G64400,AT4G16680,AT3G03950,AT3G52220,AT5G38770,AT1G80860,AT1G68670,AT3G44735,AT2G46930,AT5G63680,AT5G54060,AT1G06390,AT5G04080,AT5G19290,AT2G18960,AT3G44320,AT1G64490,AT4G12790,AT2G46780,AT4G27590,AT1G60730,AT5G12140,AT3G52850,AT4G15890,AT2G40880,AT3G09520,AT4G18710,AT1G15860,AT4G08960,AT4G04830,AT4G32950,AT4G17520,AT1G77230,AT5G55480,AT5G59740,AT5G15490,AT1G61667,AT1G72680,AT5G26360,AT3G44990,AT4G02380,AT3G05060,AT2G32920,AT2G21930,AT3G20060,AT1G14980,AT5G54390,AT5G10510,AT4G38780,AT2G17760,AT4G34110,AT3G17240,AT1G73490,AT1G66970,AT4G39730,AT1G64260,AT3G44750,AT5G64350,AT3G25655,AT4G18610,AT5G25940,AT3G17820,AT1G14900,AT3G06850 KANNO_DMS4/DRD1_DN Down-Genes differentially regulated in dms4 compared to drd1. (Table S3 PubmedID:20010803) AT5G42900,AT1G07050,AT5G23240,AT2G21130,AT4G33980,AT4G34950,AT5G62360,AT2G40080,AT5G11150,AT5G67480,AT4G30650,AT2G42530,AT2G23910,AT3G20810,AT3G07650,AT1G78970,AT3G16530,AT2G22450,AT5G60100,AT3G57890,AT1G12710,AT5G61380,AT1G17665,AT5G54960,AT4G32340,AT2G15880,AT5G16960,AT1G49230,AT1G56300,AT3G47860,AT2G21660,AT1G67810,AT3G63160,AT2G33830,AT2G28900,AT1G79440,AT1G10060,AT1G04110,AT3G48360,AT2G01150,AT5G06690,AT5G23870,AT3G30720,AT3G05800,AT3G59820,AT4G09020,AT4G19530,AT1G28330,AT5G18800,AT5G04360,AT1G04620,AT5G48250,AT5G10380,AT1G71050,AT5G37260,AT4G23060,AT1G18030,AT5G26220,AT5G35735,AT1G31690,AT5G55450,AT4G12750,AT5G59010,AT5G26570,AT4G33720,AT2G19450,AT1G11210,AT1G10760,AT4G11280,AT4G01130,AT5G50450,AT4G04330,AT1G23730,AT1G55450,AT2G25930,AT5G57760,AT5G17700,AT3G15110,AT1G53100,AT4G16146,AT3G05370,AT1G51610,AT1G44830,AT3G46970,AT4G19860,AT3G25890,AT4G23180,AT4G24350,AT4G25940,AT1G19960,AT1G48210,AT1G27630,AT3G56710,AT2G39190,AT4G18240,AT5G19890,AT4G27120,AT1G80280,AT3G60420,AT1G77460,AT5G51570,AT5G44420,AT1G65070,AT1G53035,AT1G18485,AT3G04210,AT1G34380,AT2G16660,AT5G24470,AT4G17490,AT3G24140,AT1G49650,AT3G14020,AT3G46600,AT4G17120,AT5G57110,AT2G39920,AT3G23550,AT4G20430,AT3G56410,AT4G08470,AT2G19310,AT5G48960,AT1G18570,AT1G65060,AT4G14400,AT5G59130,AT3G20240,AT3G12685,AT2G41090,AT1G13270,AT1G43620,AT4G33985,AT4G31050,AT4G10000,AT5G14960,AT2G36750,AT1G67660,AT2G23950,AT3G53250,AT4G21990,AT3G48720,AT1G66940,AT1G07135,AT1G25450,AT2G25730,AT3G59350,AT4G38550,AT5G61520,AT4G01390,AT2G02120,AT4G07820,AT5G64860,AT2G25950,AT1G49720,AT5G62720,AT1G06160,AT5G63810,AT2G06925,AT2G46110,AT1G06460,AT4G14660,AT2G01520,AT1G76960,AT3G42670,AT2G40070,AT3G55710,AT2G16380,AT3G14620,AT1G80480,AT5G66880,AT1G05230,AT5G61600,AT4G24810,AT3G61010,AT5G16380,AT1G18170,AT1G66350,AT5G35740,AT4G36500,AT2G04460,AT3G56400,AT2G39900,AT3G07640,AT3G47800,AT1G68220,AT3G52290,AT3G05690,AT2G24120,AT5G54610,AT5G57250,AT5G08520,AT3G02800,AT3G06840,AT3G50210,AT1G51940,AT5G01780,AT5G57630,AT3G28930,AT5G65630,AT5G22840,AT1G69890,AT5G40160,AT1G22800,AT5G44870,AT5G02150,AT1G21680,AT1G72180,AT5G17890,AT1G80840,AT2G32290,AT1G21600,AT1G28530,AT1G74700,AT2G30010,AT1G69910,AT3G52870,AT5G25210,AT2G37520,AT3G45140,AT3G06130,AT4G33480,AT1G21250,AT2G26540,AT5G14550,AT3G52110,AT1G12730,AT3G02120,AT2G42800,AT3G56090,AT5G39210,AT2G40480,AT3G58760,AT1G67970,AT2G25735,AT2G48120,AT4G30720,AT4G17230,AT5G61570,AFFX-PheX-5,AT1G08500,AT5G03770,AT5G03350,AT1G50110,AT1G78420,AT5G52190,AT2G46600,AT5G23210,AT4G31820,AT1G70890,AT1G69080,AT5G58600,AT1G62050,AT2G29630,AT2G41100,AT1G71000,AT4G19810,AT3G21740,AT1G05575,AT4G14230,AT1G79110,AT5G52450,AT2G32640,AT4G29540,AT5G03120,AT5G58310,AT1G15220,AT3G01310,AT4G17150,AT4G26670,AT4G27620,AT1G12520,AT5G09300,AT1G53430,AT5G07580,AT5G04540,AT1G78995,AT5G53010,AT1G51460,AT2G17840,AT4G09640,AT5G14090,AT4G16060,AT5G36890,AT5G02760,AT5G20630,AT5G63140,AT2G41180,AT4G21400,AT2G18850,AT1G26665,AT3G53800,AT5G08260,AT1G28320,AT1G69830,AT5G18525,AT3G22190,AT1G61240,AT1G79700,AT4G33050,AT3G42640,AT5G51180,AT2G30280,AT5G14920,AT1G22570,AT2G43850,AT3G19550,AT4G38460,AT3G52180,AT5G45250,AT1G03210,AT3G43670,AT3G19960,AT1G49750,AT5G41260,AT1G13210,AT1G66570,AT3G63420,AT3G57260,AT3G01440,AT3G10520,AT3G17700,AT2G28190,AT5G60540,AT2G38465,AT3G17365,AT2G19170,AT2G43550,AT5G28290,AT1G34260,AT2G33735,AT1G31580,AT5G28220,AT3G02570,AT1G31850,AT2G28085,AT1G22690,AT5G09820,AT4G11360,AT4G13250,AT3G60630,AT2G22870,AT1G25275,AT5G38220,AT2G34090,AT2G35450,AT5G47240,AT5G48370,AT1G69040,AT4G38110,AT3G45260,AT1G31680,AT3G02060,AT5G52110,AT5G43270,AT4G29610,AT1G28050,AT1G21730,AT5G42420,AT3G17950,AT1G75010,AT5G39790,AT2G25660,AT5G53460,AT5G47800,AT3G17030,AT3G53460,AT3G15630,AT4G00330,AT3G56690,AT3G29375,AT5G08400,AT3G09020,AT4G14270,AT2G34200,AT5G55100,AT4G21870,AT5G65205,AT5G03730,AT1G74680,AT5G57700,AT4G33490,AT3G58010,AT1G22890,AT1G67550,AT1G72320,AT1G76590,AT3G07630,AFFX-r2-Bs-thr-5_s_AT,AT4G26370,AT5G50420,AT5G35080,AT3G26200,AT4G19660,AT3G18990,AT2G17230,AT1G64460,AT3G50700,AT1G64890,AT1G77210,AT5G35840,AT4G33470,AT1G08030,AT5G27710,AT3G47380,AT5G61590,AT5G04260,AT5G56040,AT1G05200,AT5G20935,AT3G09010,AT5G38360,AT1G28060,AT5G11070,AT5G66290,AT5G48830,AT4G17470,AT3G46490,AT1G11350,AT3G58100,AT1G71696,AT3G55450,AT5G64620,AT5G02860,AT3G57600,AT1G50170,AT2G01170,AT5G05540,AT3G45640,AT5G11250,AT5G08380,AT5G56590,AT3G55080,AT5G05410,AT3G58050,AT5G63420,AT3G04550,AT5G25590,AT1G17460,AT3G13800,AT1G04990,AT5G65450,AT2G40300,AT2G31170,AT1G29090,AT4G38410,AT3G14310,AT1G23060,AT3G60130,AT1G75040,AT3G43610,AT1G17590,AT3G48970,AT1G56220,AT2G19620,AT2G15890,AT2G37310,AT2G19950,AT5G66320,AT5G13300,AT2G25300,AT3G04890,AT2G38440,AT5G56260,AT5G06610,AT5G39030,AT5G51600,AT3G18370,AT3G53400,AT5G52810,AT1G27480,AT5G11950,AT1G29395,AT4G10470,AT4G31560,AT4G17110,AT2G20480,AT5G01180,AT3G62550,AT1G20020,AT5G08640,AT3G45860,AT3G03110,AT1G08650,AT1G72830,AT4G20890,AT1G78960,AT4G32290,AT5G11580,AT4G35530,AT5G35930,AT4G22540,AT1G49890,AT3G20780,AT4G32320,AT2G03310,AT2G36970,AT5G39830,AT3G13490,AT5G10760,AT4G08150,AT1G73655,AT3G56330,AT1G59930,AT2G36250,AT4G10070,AT5G39410,AT3G23880,AT1G05960,AT2G27200,AT4G08170,AT4G05040,AT1G26230,AT2G33440,AT1G60680,AT3G55920,AT4G30630,AT1G35710,AT3G57800,AT2G38090,AT5G59980,AT5G27270,AT2G45880,AT1G21350,AT5G64600,AT3G11520,AT2G02960,AT2G46200,AT5G18540,AT3G15095,AT3G52260,AT1G49860,AT2G14610,AT3G09350,AT1G75960,AT3G58520,AT1G27460,AT3G29390,AT2G41080,AT5G56730,AT3G05600,AT4G38490,AT3G58570,AT5G51100,AFFX-ThrX-5_AT,AT2G47240,AT5G13730,AT5G10695,AT3G59010,AT2G46650,AT5G51820,AT4G18530,AT1G76850,AT5G44150,AT2G38470,AT2G44150,AT5G56300,AT1G76280,AT3G15040,AT1G15510,AT2G20180,AT1G20630,AT2G36730,AT4G19410,AT4G35480,AT5G62340,AT2G37450,AT3G56750,AT5G60930,AT2G19860,AT2G18876,AT3G63510,AT3G19350,AT1G31550,AT4G31060,AT2G26560,AT2G23200,AT5G04560,AT2G21070,AT2G26640,AT1G02910,AT5G18470,AT2G03340,AT4G37240,AT5G02710,AT2G36490,AT2G23470,AT2G45270,AT3G14960,AT5G41460,AT2G27590,AT4G13840,AT3G15520,AT3G14370,AT4G22530,AT1G16020,AT5G24210,AT5G60910,AT5G57580,AT5G07630,AT2G21540,AT3G07200,AT5G14100,AT1G31335,AT2G25510,AT1G49560,AT5G49820,AT1G19025,AT2G02100,AT3G02070,AT2G34650,AT1G48330,AT4G32280,AT1G21312,AT1G25390,AT4G34140,AT2G36390,AT1G49350,AT1G28710,AT2G32240,AT3G13740,AT1G78450,AT5G36930,AT1G74850,AT2G42870,AT4G24530,AT3G25070,AT3G12950,AT2G42610,AT4G27800,AT3G22150,AT1G14270,AT2G33860,AT4G35190,AT3G23280,AT4G37670,AT4G26070,AT5G54930,AT4G24440,AT5G61900,AT3G04260,AT5G49330,AT4G39260,AT1G13670,AT5G40750,AT5G15180,AT4G11460,AT3G21650,AT1G22770,AT1G32150,AT3G07320,AT5G65310,AT2G22570,AT1G15490,AT5G67440,AT4G02750,AT2G38970,AT2G22080,AT5G24310,AT1G63470,AT5G47420,AT5G38290,AT1G07560,AT4G17615,AT4G18290,AT1G21270,AT3G50240,AT2G22830,AT1G02300,AT5G54940,AT3G49530,AT3G10300,AT1G08980,AT2G22500,AT2G19460,AT1G17455,AT3G63240,AT3G51410,AT1G71800,AT1G76170,AT3G07510,AT3G19190,AT5G41920,AT5G47500,AT3G63180,AT5G44260,AT1G02640,AT4G37110,AT5G16630,AT3G27320,AT5G65040,AT1G67910,AT4G13640,AT1G22070,AT2G28940,AT5G11040,AT5G38140,AT3G07060,AT1G59750,AT1G79460,AT5G12440,AT4G36140,AT1G69840,AT3G52155,AT2G47850,AT1G30860,AT3G29030,AT5G44130,AT4G02550,AT1G17700,AT1G72390,AT3G29635,AT1G56310,AT5G47230,AT1G13880,AT5G48500,AT5G45610,AT2G37940,AT1G15000,AT2G31040,AT1G56210,AT3G04640,AT3G11020,AT2G28360,AT5G27280,AT4G00230,AT3G09540,AT5G61190,AT4G23440,AT2G42850,AT5G20030,AT1G19370,AT4G36920,AT3G50120,AT4G37890,AT5G07590,AT5G41810,AT1G63240,AT5G61160,AT3G49620,AT1G77220,AT4G01860,AT1G53000,AT1G54160,AT1G04910,AT5G14270,AT1G32960,AT5G52320,AT5G46690,AT4G11410,AT4G04790,AT1G69870,AT5G24620,AT1G55500,AT5G55030,AT1G57590,AT5G50800,AT5G02010,AT1G64590,AT3G63170,AT2G38460,AT1G53760,AT3G49500,AT3G15030,AT4G20780,AT5G52550,AT3G60530,AT3G61160,AT4G25830,AT3G06480,AT1G04770,AT2G42670,AT1G53390,AT5G52850,AT4G23040,AT3G12980,AT5G63780,AT1G30910,AT1G58230,AT1G75130,AT2G32400,AT4G19390,AT5G44730,AT5G55990,AT2G47890,AT2G22650,AT5G11350,AT1G19690,AT3G56720,AT3G54790,AT4G22830,AT4G00730,AT3G51620,AT5G08100,AT3G05410,AT1G28190,AT3G26740,AT1G62045,AT5G64570,AT3G49160,AT5G24570,AT2G12400,AT2G33330,AT1G17430,AT1G01500,AT4G15090,AT1G10990,AT1G20010,AT5G42450,AT3G23540,AT1G80170,AT1G75800,AT2G31190,AT5G60670,AT5G24490,AT2G31700,AT3G01660,AT1G62310,AT2G20900,AT2G44740,AT1G30600,AT1G17160,AT2G03540,AT2G46090,AT5G61440,AT1G59870,AT1G20100,AT4G27900,AT2G30070,AT5G37850,AT3G07390,AT1G17090,AT2G03980,AT3G62050,AT5G58900,AT5G43880,AT3G16720,AT5G48570,AT3G19900,AT1G09280,AT2G40760,AT4G36480,AT1G16710,AT3G16750,AT2G31230,AT5G61360,AT2G24250,AT1G22370,AT1G11530,AT2G39400,AT4G30500,AT1G79500,AT4G18520,AT2G44420,AT2G28930,AT5G53430,AT5G47220,AT1G75820,AT4G04040,AT3G10985,AT3G28080,AT1G80080,AT5G52100,AT5G24270,AT4G36930,AT1G09795,AT4G18975,AT5G23150,AT5G02540,AT1G08550,AT4G19120,AT3G17590,AT1G79540,AT4G13100,AT3G11820,AT1G15020,AT3G62620,AT3G60810,AT3G13225,AT3G26580,AT1G60610,AT2G22400,AT1G09530,AT5G49800,AT1G13930,AT2G20650,AT1G48370,AT3G47160,AT1G50840,AT1G58150,AT2G40690,AT2G32900,AT3G50500,AT1G22310,AT5G52790,AT5G05310,AT5G49530,AT3G45430,AT4G11980,AT5G46860,AT3G47540,AT5G51770,AT1G78460,AT5G39020,AT5G17880,AT1G17980,AT1G61065,AT5G23860,AT1G06180,AT1G22620,AT4G02260,AT1G67800,AT3G16180,AT1G49480,AT3G58780,AT5G52120,AT5G61040,AT1G66980,AT4G39450,AT1G02475,AT1G14030,AT1G22590,AT3G23760,AT2G37540,AT1G80640,AT4G21410,AT4G36790,AT5G05660,AT4G33960,AT3G29400,AT4G02030,AT2G29480,AT1G70070,AT1G76530,AT4G30660,AT2G38290,AT5G59000,AT2G26150,AT5G10700,AT1G22740,AT2G36720,AT4G19110,AT3G45750,AT2G14560,AT1G73500,AT2G18670,AT2G02410,AT1G72230,AT4G09970,AT1G19670,AT4G16250,AT1G59980,AT5G06930,AT5G27930,AT3G43540,AT1G17410,AT5G13470,AT4G21190,AT1G74310,AT1G29750,AT2G44850,AT5G27400,AT3G09000,AT2G03090,AT3G09410,AT4G29440,AT5G56870,AT4G23880,AT5G11670,AT5G03470,AT2G40140,AT1G68400,AT1G74940,AT3G62370,AT2G32440,AT1G76580,AT1G25375,AT1G72250,AT5G40170,AT5G66530,AT3G61150,AT1G05630,AT1G10770,AT3G49260,AT4G23920,AT5G67290,AT5G44450,AT3G53760,AT2G32390,AT2G47880,AT2G31320,AT1G17350,AT1G12470,AT5G50915,AT4G09630,AT2G44570,AT1G63740,AT1G52770,AT4G19420,AT3G43700,AT3G07740,AT5G55540,AT2G28840,AT5G66310,AT2G21370,AT3G42800,AT3G58830,AT2G01910,AT5G44620,AT5G64640,AT1G10210,AT5G43440,AT5G56220,AT5G54380,AT5G07180,AT1G67620,AT5G25170,AT5G13290,AT5G37500,AT5G18210,AT5G41410,AT4G01900,AT1G26260,AT1G14140,AT2G22720,AT2G33790,AT1G29240,AT4G36400,AT2G37420,AT3G06140,AT1G17930,AT5G16040,AT5G52030,AT5G35750,AT3G55630,AT3G56650,AT2G42110,AT5G60430,AT2G26070,AT2G48050,AT2G15830,AT5G54490,AT1G35220,AT3G18230,AT5G45260,AT5G02290,AT1G01600,AT3G55260,AT5G25350,AT5G39820,AT4G00950,AT4G12410,AT3G43240,AT2G26200,AT5G49170,AT1G04930,AT1G63260,AT3G50810,AT3G11620,AT3G17900,AT5G65250,AT1G20620,AT5G37670,AT4G25970,AT4G28220,AT4G32900,AT1G62870,AT3G53240,AT3G20720,AT5G26920,AT5G13720,AT3G17910,AT1G65960,AT4G30310,AT5G55930,AT2G42130,AT1G58160,AT5G25110,AT3G03000,AT2G01080,AT2G46530,AT1G08660,AT2G30420,AT1G11000,AT1G52250,AT3G07990,AT5G05890,AT5G27650,AT1G63480,AT4G23000,AT3G29100,AT4G33790,AT5G04810,AT4G31115,AT4G19515,AT5G49030,AT4G31290,AT1G04640,AT1G53710,AT5G05550,AT5G09690,AT2G45320,AT4G24540,AT5G22700,AT5G07010,AT1G19180,AT1G53530,AT5G01230,AT2G06050,AT5G61910,AT5G59020,AT5G02160,AT5G66560,AT3G32930,AT1G53350,AT1G16390,AT2G33570,AT3G46500,AT1G11320,AT1G52900,AT4G20320,AT5G24830,AT5G50010,AT5G19540,AT2G17033,AT2G03470,AT1G79990,AT3G55320,AT2G38680,AT5G50110,AT1G12790,AT1G07420,AT1G48360,AT5G04820,AT2G40750,AT3G51120,AT1G25320,AT5G43810,AT1G56520,AT5G03370,AT5G58480,AT3G15900,AT3G17450,AT5G52070,AT3G57080,AT1G67470,AT5G35480,AT1G64630,AT2G20780,AT3G02600,AT1G20230,AT1G54050,AT4G12270,AT4G24010,AT4G08790,AT5G06180,AT2G18170,AT1G11960,AT1G78990,AT2G45910,AT1G11290,AT1G33330,AT4G15130,AT4G15110,AT1G76650,AT5G26960,AT5G63330,AT5G49630,AT4G18580,AT2G20370,AT5G04510,AT5G50335,AT4G11370,AT4G04340,AT3G27560,AT1G26270,AT1G78410,AT1G70420,AT3G45830,AT5G11610,AT2G42390,AT1G09900,AT4G36870,AT2G17020,AT3G59570,AT2G37585,AT1G54730,AT4G24090,AT1G52410,AT5G54520,AT2G37640,AT3G20340,AT3G50170,AT1G79840,AT2G22190,AT1G12430,AT3G54970,AT4G28590,AT5G06580,AT1G63100,AT5G46390,AT2G42540,AT3G12550,AT5G25880,AT3G13180,AT5G43740,AT3G03590,AT1G09370,AT4G25450,AT5G26700,AT2G38330,AT1G26580,AT3G60410,AT3G18080,AT1G56510,AT3G19570,AT1G10090,AT4G11090,AT4G35130,AT5G17690,AT1G20940,AT1G30520,AT1G68890,AT1G67140,AT5G06270,AT3G62410,AT1G07280,AT2G12190,AT2G25250,AT4G28850,AT1G61170,AT1G64810,AT1G47270,AT5G18130,AT1G12845,AT5G51190,AT4G21550,AT3G13690,AT4G22250,AT5G05800,AT1G57540,AT5G45840,AT2G36230,AT1G47240,AT3G28460,AT2G05160,AT1G66090,AT5G05740,AT5G53920,AT5G64330,AT2G18680,AT1G06980,AT5G53150,AT4G13560,AT3G12040,AT1G72190,AT4G18230,AT4G32010,AT1G53700,AT2G36485,AT1G54040,AT1G53060,AT3G10140,AT1G51745,AT4G27280,AT5G25500,AT1G14440,AT2G28305,AT2G45850,AT1G27410,AT1G59840,AT3G53310,AT3G12560,AT1G12220,AT1G64330,AT5G56270,AT4G35420,AT3G50770,AT1G58110,AT2G40960,AT3G53090,AT1G73350,AT2G04860,AT1G08560,AT3G03210,AT4G17410,AT1G79070,AT3G55980,AT1G01780,AT3G22460,AT1G59620,AT1G63070,AT1G02800,AT1G14130,AT5G54860,AT1G58200,AT4G21650,AT5G33280,AT1G18680,AT3G18690,AT2G17975,AT3G29780,AT1G28410,AT2G32010,AT1G19300,AT2G21140,AT2G34150,AT1G43770,AT5G47490,AT5G57540,AT5G15280,AT2G43235,AT1G55130,AT5G18960,AT3G57790,AT5G54090,ATMG00050,AT5G24750,AT1G76730,AT1G19510,AT1G79670,AT5G47970,AT2G04270,AT4G03410,AT1G77810,AT4G33170,AT5G38320,AT4G33460,AT2G35750,AT2G12550,AT5G46370,AT3G52540,AT2G24440,AT3G28310,AT3G19880,AT3G50890,AT5G44180,AT2G38790,AT3G15500,AT1G20640,AT5G44210,AT1G51090,AT1G25580,AT2G41980,AT3G48440,AT4G30080,AT4G35770,AT4G04190,AT5G47330,AT2G46620,AT4G00180,AT1G75730,AT2G26020,AT3G48550,AT5G61580,AT3G20680,AT5G08130,AT1G47485,AT1G67560,AT3G49050,AT2G17040,AT5G52430,AT2G01320,AT3G52750,AT3G09870,AT1G48120,AT1G68080,AT3G51830,AT3G07010,AT2G33680,AT1G33390,AT5G10170,AT3G08760,AT1G14660,AT1G07615,AT1G76270,AT3G11840,AT2G44660,AT5G05280,AT1G03740,AT5G47070,AT3G17310,AT1G55930,AT5G55170,AT1G23130,AT5G41000,AT4G00760,AT5G22310,AT2G26530,AT1G60490,AT1G13950,AT4G39900,AT4G09890,AT1G07030,AT2G18650,AT5G01200,AT3G28760,AT4G32440,AT4G05090,AT3G06150,AT3G26760,AT2G19430,AT2G01190,AT3G55600,AT2G25920,AT3G26932,AT3G59660,AT5G44070,AT1G60860,AT4G28540,AT5G24970,AT3G14980,AT5G03430,AT3G18070,AT5G27970,AT5G26040,AT5G18170,AT1G10020,AT1G30820,AT5G16560,AT3G18524,AT2G26330,AT2G18890,AT5G57140,AT1G07910,AT5G23090,AT1G12750,AT1G56020,AT5G56750,AT1G07000,AT5G61400,AT1G52520,AT5G09230,AT2G05170,AT5G23380,AT5G42240,AT2G40840,AT2G25420,AT5G60800,AT2G27110,AT1G05160,AT4G23600,AT5G50170,AT4G37980,AT4G09160,AT5G13800,AT3G52700,AT3G55180,AT1G58220,AT2G24350,AT4G39180,AT5G64520,AT1G54990,AT1G66890,AT1G75780,AT3G10030,AT3G42950,AT1G07650,AT1G21670,AT1G73980,AT4G14560,AT1G61490,AT1G24460,AT3G55760,AT5G35170,AT5G59550,AT4G07400,AT3G44200,AT1G24625,AT5G62030,AT1G09730,AT1G60995,AT3G09030,AT2G30040,AT5G06770,AT5G58960,AT2G45660,AT3G12020,AT1G64110,AT1G06990,AT3G50650,AT5G04930,AT2G43130,AT3G12530,AT2G33600,AT2G46240,AT5G01770,AT1G01190,AT4G09900,AT1G26130,AT3G61690,AT5G27410,AT3G03180 BERR_FUNCTIONALLY-ESSENTIAL_GAMETOPHYTE-DEVELOPMENT_DN Downregulated Genes in sdg2-1 That Are Known to Be Functionally Essential for Gametophyte Development (Table 2 PubmedID:21037105) AT4G27330,AT1G05690,AT4G21330,AT5G56110,AT5G22260,AT3G60460,AT3G11980,AT5G62320,AT3G10000,AT3G03650,AT2G01280 BERR_SDG2-1/WT-FLOWER-BUD_STAGE8_DN Down-regulated by more than 2-fold in sdg2-1 compared to wild-type flower buds around developmental stage 8. (Table S1 PubmedID:21037105) AT1G30930,AT2G23120,AT1G79450,AT4G18510,AT1G78460,AT3G28415,AT1G13650,AT3G26125,AT3G03150,AT3G26740,AT3G25930,AT1G75920,AT4G15180,AT3G24280,AT5G24790,AT5G62080,AT1G18120,AT3G20975,AT3G12540,AT5G07230,AT1G62270,AT1G24230,AT1G60240,AT1G18960,AT1G10588,AT1G30835,AT5G45830,AT1G05690,AT1G76470,AT1G52827,AT1G20132,AT2G21100,AT1G07795,AT4G18190,AT2G39510,AT3G22800,AT4G10850,AT3G27030,AT3G26440,AT1G58602,AT1G75930,AT5G45890,AT3G16240,AT5G59320,AT3G56850,AT3G16460,AT1G79800,AT1G72645,AT5G13635,AT1G28700,AT1G17540,AT3G29580,AT1G35630,AT3G03650,AT4G31330,AT1G74453,AT1G67920,AT5G43695,AT5G44578,AT5G62065,AT5G04347,AT5G37230,AT5G66020,AT5G40155,AT4G00114,AT4G13494,AT4G14811,AT4G13495,AT4G01533,AT4G34470,AT4G02970,AT4G32215,AT4G02950,AT4G22960,AT4G34210,AT4G09470,AT3G58877,AT3G28291,AT3G61410,AT3G44640,AT3G59880,AT3G29779,AT2G39782,AT2G30368,AT2G23348,AT2G21188,AT2G41415,AT2G21895,AT2G21740,AT2G32350,AT2G23860,AT2G04625,AT2G18260,AT2G18420,AT2G21185,AT1G15772,AT1G63057,AT1G53887,AT1G32992,AT1G77215,AT1G02952,AT1G14100,AT1G44191,AT1G60625,AT1G68825,AT1G55928,AT1G52430,AT1G40080,AT1G61650,AT1G80970,AT1G22590,AT1G66050,AT1G73550,AT5G15290,AT4G28397,AT3G17675,AT5G53592,AT5G44060,AT1G70400,AT5G38680,AT5G28615,AT4G01023,AT3G10460,AT5G63090,AT2G23945,AT5G23700,AT3G10525,AT4G29250,AT5G47635,AT5G35110,AT3G58000,AT2G24762,AT2G06255,AT4G00610,AT2G42140,AT5G09610,AT3G55570,AT4G10740,AT5G57887,AT2G01280,AT5G27930,AT2G21237,AT1G26290,AT5G39330,AT3G18360,AT2G23970,AT5G22260,AT3G10750,AT2G42900,AT1G77655,AT4G39340,AT5G38090,AT4G35710,AT1G61050,AT3G28330,AT5G52160,AT1G76830,AT5G61260,AT1G74130,AT4G12930,AT5G61110,AT2G33750,AT4G14815,AT1G12030,AT1G07473,AT5G41640,AT4G12940,AT3G04620,AT4G09300,AT1G49000,AT1G07476,AT4G19250,AT2G39320,AT1G65160,AT1G54540,AT5G48420,AT3G01311,AT2G42885,AT1G52855,AT1G79780,AT1G16290,AT5G49250,AT3G17560,AT3G12420,AT1G02813,AT5G42785,AT1G20925,AT5G17590,AT2G38905,AT2G31220,AT4G24420,AT4G20390,AT4G22080,AT5G03480,AT5G41130,AT5G37860,AT2G35730,AT5G28626,AT3G03760,AT3G27210,AT4G03220,AT1G58210,AT4G01200,AT2G15790,AT5G48210,AT4G23870,AT3G24225,AT5G07475,AT4G03370,AT5G22580,AT3G03510,AT4G04080,AT1G21500,AT3G52160,AT1G62940,AT3G48950,AT3G45060,AT3G21950,AT2G19070,AT2G46660,AT1G04880,AT2G16750,AT1G64030,AT2G03200,AT1G71160,AT1G23040,AT5G66710,AT3G20450,AT5G47150,AT1G18280,AT4G38390,AT4G30030,AT4G08570,AT3G61810,AT1G24600,AT3G18590,AT1G26390,AT3G09160,AT3G11600,AT2G14900,AT2G42560,AT1G66460,AT1G30800,AT1G09880,AT1G03620,AT1G51420,AT1G61110,AT5G44540,AT1G06170,AT3G61230,AT3G21910,AT3G27660,AT1G16310,AT1G02470,AT2G29940,AT1G78950,AT1G75790,AT1G02050,AT2G18115,AT5G28520,AT5G55590,AT5G25530,AT1G18520,AT5G02540,AT1G78955,AT3G61760,AT3G52130,AT3G07450,AT1G65090,AT1G32180,AT5G37470,AT5G14990,AT5G14760,AT5G46050,AT5G06839,AT4G27330,AT1G32450,AT4G23690,AT1G06280,AT3G55890,AT3G45450,AT2G42940,AT2G39110,AT1G07860,AT2G45650,AT2G20470,AT1G09720,AT1G70020,AT1G24400,AT5G49070,AT4G22870,AT5G26730,AT5G25090,AT1G23570,AT5G14300,AT5G05390,AT4G32510,AT1G06250,AT3G62860,AT3G24715,AT4G25850,AT2G03750,AT5G11130,AT2G41290,AT2G39820,AT2G24800,AT1G54240,AT1G55560,AT1G24480,AT5G15720,AT5G50120,AT5G40040,AT5G07520,AT4G32500,AT4G21120,AT1G02510,AT2G39590,AT2G19500,AT2G23510,AT1G49130,AT1G60570,AT5G46540,AT5G38260,AT5G27200,AT4G26830,AT3G46070,AT3G42960,AT3G26140,AT1G73165,AT3G22210,AT1G68880,AT1G23150,AT1G15850,AT2G31215,AT1G65970,AT5G41890,AT1G03700,AT4G10260,AT4G10060,AT1G02770,AT1G15460,AT5G60400,AT1G74990,AT1G78440,AT1G32780,AT5G63730,AT5G60500,AT5G56110,AT5G44480,AT1G33700,AT4G15100,AT4G12920,AT3G10000,AT2G36190,AT4G21780,AT5G16920,AT1G69500,AT1G75030,AT1G49160,AT1G78230,AT1G13140,AT1G65620,AT2G31035,AT5G16700,AT5G50060,AT5G24820,AT1G62770,AT4G28090,AT4G21330,AT2G19110,AT2G27180,AT1G71050,AT1G23770,AT2G28605,AT1G56680,AT5G62320,AT5G51060,AT5G43360,AT1G06520,AT4G09430,AT4G08670,AT4G01430,AT3G50570,AT3G11980,AT3G29070,AT4G29980,AT2G25150,AT1G75050,AT1G24470,AT1G08065,AT5G62310,AT5G53190,AT5G43340,AT5G27580,AT4G35380,AT4G28530,AT4G27420,AT3G15830,AT3G60460,AT3G60010,AT3G06100,AT3G15510,AT2G34555,AT1G30020,AT2G03160,AT1G01280,AT1G16510,AT1G05020,AT5G58310,AT5G65090,AT5G60660,AT5G54010,AT5G17200,AT2G31620,AT4G37220,AT4G16160,AT4G26740,AT1G29090,AT3G57620,AT3G48970,AT3G46520,AT3G05890,AT1G53480,AT1G78000,AT1G03390,AT1G62500,AT5G14860,AT1G47980,AT5G55320,AT5G43520,AT4G22090,AT5G07820,AT1G75160,AT4G18550,AT3G59510,AT3G57390,AT1G26720,AT2G03460,AT1G69050,AT5G35090,AT2G37360,AT1G61070,AT1G77210,AT1G23560,AT5G66110,AT5G59930,AT5G53990,AT5G52000,AT5G14130,AT5G13600,AT4G30040,AT4G05260 BERR_SDG2-1/WT-FLOWER-BUD_STAGE8_UP Up-regulated by more than 2-fold in sdg2-1 compared to wild-type flower buds around developmental stage 8. (Table S1 PubmedID:21037105) AT3G17380,AT1G65150,AT1G57560,AT1G74560,AT4G19420,AT1G12110,AT5G17310,AT3G22310,AT4G08390,AT4G00430,AT3G48420,AT2G01010,AT2G04030,AT1G54270,AT2G06050,AT5G28500,AT4G35580,AT3G26330,AT3G63200,AT3G13110,AT5G35935,AT4G18480,AT5G22650,AT1G24030,AT3G07560,AT2G43670,AT1G29490,AT5G28360,AT5G59920,AT3G56160,AT3G26230,AT1G04250,AT5G55250,AT4G04220,AT5G45380,AT5G07610,AT1G04310,AT4G08350,AT5G56500,AT5G15580,AT5G64890,AT3G19780,AT4G25640,AT1G20920,AT3G45130,AT2G12480,AT5G46260,AT2G04170,AT5G16230,AT3G16280,AT1G63650,AT1G55910,AT1G78510,AT1G70230,AT5G15910,AT5G56680,AT5G07990,AT2G18730,AT1G17720,AT5G59950,AT2G24190,AT5G20830,AT1G17840,AT4G02930,AT2G43060,AT4G31180,AT1G01300,AT1G72970,AT4G18570,AT4G00730,AT5G26743,AT3G52880,AT4G14030,AT1G02930,AT2G24200,AT5G67360,AT1G54040,AT5G25610,AT3G08590,AT1G64390,AT3G16420,AT5G47210,AT5G46730,AT3G58610,AT3G60750,AT3G20470,AT2G21330,AT5G17920,AT4G33010,AT2G37620,AT3G23820,AT1G07940,AT2G46920,AT1G22710,AT4G16580,AT2G19780,AT1G49760,AT1G15690,AT3G03450,AT5G55650,AT4G08093,CLE16,AT3G58200,AT5G65940,AT5G23035,AT4G21745,AT4G26420,AT3G10986,AT3G29644,AT3G22275,AT3G04735,AT3G48526,AT2G42388,AT2G42835,AT2G16367,AT1G31540,AT1G56242,AT1G58245,AT1G63080,AT1G19420,AT1G29380,AT1G70260,B5#1,AT4G13992,AT4G00960,AT4G16990,AT2G33520,AT2G41150,AT1G65050,AT3G48770,AT1G03055,AT5G55570,AT1G14250,AT5G45150,AT4G15990,AT4G37720,AT2G11405,AT5G38100,AT2G20830,AT5G48175,AT3G20400,AT1G11690,AT5G15900,AT5G42760,AT1G29420,AT4G01985,AT3G13500,AT2G34820,AT5G67120,AT3G26840,AT5G45540,AT2G18193,AT4G17680,AT1G45201,AT1G27610,AT1G32910,AT4G19970,AT2G34530,AT3G16410,AT2G23960,AT2G24140,AT5G62440,AT1G58280,AT3G26470,AT3G62530,AT3G28890,AT5G20550,AT2G18360,AT4G36880,AT4G23290,AT4G18250,AT3G47380,AT3G24790,AT1G09400,AT3G13100,AT3G04030,AT2G43510,AT1G52800,AT1G77530,AT1G03940,AT1G21550,AT3G47090,AT3G44310,AT3G13090,AT3G27040,AT3G23240,AT1G69190,AT3G12890,AT5G50140,AT1G29660,AT3G25030,AT5G24530,AT4G21940,AT3G12500,AT3G23340,AT1G61600,AT4G18180,AT2G38860,AT3G55230,AT2G20020,AT3G04110,AT2G48090,AT2G18370,AT1G70890,AT1G04660,AT1G61610,AT5G05340,AT4G37710,AT3G61940,AT1G53240,AT1G13300,AT1G01580,AT3G19085,AT5G19720,AT5G61550,AT5G57290,AT5G42800,AT5G25470,AT3G26320,AT2G28960,AT1G44180,AT5G55380,AT5G54610,AT5G54060,AT4G37560,AT4G25820,AT4G08770,AT4G05380,AT3G14460,AT3G23570,AT1G20220,AT1G28480,AT1G10530,AT5G05600,AT4G29690,AT3G22560,AT2G23620,AT2G15310,AT2G39700,AT1G33320,AT1G55180,AT5G60900,AT2G29120,AT1G13950,AT5G40210,AT5G37610,AT5G14230,AT4G36430,AT1G19320,AT1G67790,AT1G58450,AT1G78220,AT1G69100,AT5G65320,AT5G19110,AT4G14940,AT4G39500,AT4G22880,AT3G23830,AT2G02000,AT2G33210,AT1G78360,AT1G02190,AT5G11620,AT4G11210,AT1G06100,AT3G27400,AT5G44390,AT2G46440,AT2G38340,AT1G65890,AT3G05730,AT5G37960 MIURA_W/G_PHOTOSYNTHESIS_DN Down-Entity List : Down W vs G -photosynthesis-Fold change >= 2.0 custom selection (Table S1 PubmedID:20400527) PSAH-1,LHCB6,LHCB3,LHB1B1,LHCA6,PSBP-2,PSBQ,PSAD-1,PSBY,PSAH-2,LHCA2,LHCB5,LHCB4.2,PSAL,FIB,AT3G01440,PSAD-2,LHCB2:4,LHCB2.1,LHCB2.2,AT5G01530,CAB1,CAB2,CAB3,PSAG,LHB1B2,PSBP-1,PSAP,PSAO,LHCA3,LHCA4,LHCA1,PSAH2,PSBQ-2,PSI-P,PSI-H,PSII-Q,PTAC8,TMP14 MIURA_W/G_LIGHT-HARVESTING-COMPLEX_DN Down-Entity List : Down W vs G -light-harvesting complex-Fold change >= 2.0 custom selection (Table S1 PubmedID:20400527) LHCB3,LHB1B1,LHCA6,LHCA2,LHCB5,LHCB2:4,LHCB2.1,LHCB2.2,NPQ4,AT5G01530,CAB1,CAB2,CAB3,LHB1B2,LHCA3,LHCA4,LHCA1 MIURA_W/G_TETRAPHYROLE-BINDING_DN Down-Entity List : Down W vs G -tetraphyrole binding-Fold change >= 2.0 custom selection (Table S1 PubmedID:20400527) LHCB6,LHB1B1,LHCA6,9/1/2009,LHCA2,LHCB5,LHCB4.2,LHCB2:4,LHCB2.1,LHCB2.2,NPQ4,AT5G01530,CAB3,CAB1,CAB2,LHB1B2,LHCA3,LHCA4,LHCA1 MIURA_W/G_OXIDATIVE-STRESS_UP Up-Entity List : Down W vs G -Response to oxidative stress-Fold change >= 2.0 custom selection (Table S1 PubmedID:20400527) AT1G52560,AT4G12400,AT5G06720,ATGPX7,ATFER1,AT5G06730,HSP21,AT4G37530,AT1G07400,SAPX,ATGPX2,HSP70,ATHSFA2,AT-HSP17.6A,ATGSTF6,ERD5,CSD1,ATGOLS1,AT2G29500,AT2G21640,AT5G16980,CSD2,SAG21 NAIDOO_EARLY-WILT_INFECTED-RALSTONIA-SOLANACEARUM-BCCF401_UP Up-differentially expressed at the early wilt stage in Arabidopsis thaliana Col 5 plants infected with Ralstonia solanacearum BCCF401 (Table S1 PubmedID:NA) AT4G11650,AT5G59320,AT3G01420,AT3G12500,AT1G47830,AT4G16260,AT4G37430,AT3G28710,AT1G78890,AT1G32450,AT3G04720,AT1G31130,AT5G52310,AT4G13250,AT5G53970,AT3G57520,AT1G51670,AT5G11520,AT3G10630,AT1G06570,AT5G58500,AT2G42890,AT5G49360,AT4G39090,AT2G33150 NAIDOO_EARLY-WILT_INFECTED-RALSTONIA-SOLANACEARUM-BCCF401_DN Down-differentially expressed at the early wilt stage in Arabidopsis thaliana Col 5 plants infected with Ralstonia solanacearum BCCF401 (Table S1 PubmedID:NA) AT3G22231,AT5G24770,AT1G73330,AT2G44840,AT4G15440,AT1G75040,AT1G14030,AT5G09810,AT1G70410,AT1G04250,AT3G28300,AT3G14210,AT1G06680,AT5G61650 NAIDOO_LATE-WILT_INFECTED-RALSTONIA-SOLANACEARUM-BCCF401_UP Up-differentially expressed at the late wilt stage in Arabidopsis thaliana Col 5 plants infected with Ralstonia solanacearum BCCF401 (Table S1 PubmedID:NA) AT3G01420,AT4G11650,AT5G59320,AT4G37430,AT2G47770,AT3G12500,AT2G22470,AT4G16260,AT1G03220,AT5G11520,AT2G34500,AT3G57520,AT4G13250,AT5G53970,AT1G74020,AT4G19920,AT1G32450,AT1G52890,AT3G44880,AT3G03470,AT2G33150,AT1G11260,AT1G43160,AT5G66760,AT1G31130,AT5G66170,AT5G52310,AT1G78890,AT5G46180,AT5G06760,AT4G39090,AT5G49360,AT2G42890,AT3G45310,AT3G04720,AT3G10740,AT3G02550,AT5G54080,AT4G34180,AT5G23750,AT1G03090,AT4G02380,AT1G06570,AT3G13450,AT5G13800,AT1G20440,AT3G22840,AT2G15970,AT4G37390,AT3G11780,AT5G43060,AT4G15530,AT5G58500,AT5G42250,AT2G01340,AT2G28200,AT1G75170,AT5G02020,AT3G50370,AT1G72770,AT3G48880,AT1G02205,AT5G45350,AT3G17780,AT3G28550,AT5G60580,AT5G27350,AT3G26100,AT3G58750,AT3G55610,AT5G21990,AT1G60200,AT1G17620,AT2G38710 NAIDOO_LATE-WILT_INFECTED-RALSTONIA-SOLANACEARUM-BCCF401_DN Down-differentially expressed at the late wilt stage in Arabidopsis thaliana Col 5 plants infected with Ralstonia solanacearum BCCF401 (Table S1 PubmedID:NA) AT3G22231,AT3G54810,AT2G44840,AT5G52820,AT5G24770,AT3G13140,AT3G45640,AT3G15530,AT4G16670,AT1G14030,AT5G38410,AT5G02160,AT4G12880,AT4G11320,AT1G73330,AT4G15440,AT1G75750,AT1G10150,AT3G55800,AT1G12270,AT3G45140,AT4G13830,AT1G06680,AT4G38970,AT3G58760,AT3G09940,AT1G76790,AT3G15850,AT2G44210,AT1G69120,AT5G44340?,AT1G55450,AT5G40950,AT2G01940,AT5G61650,AT1G75040,AT4G21720,AT1G74880,AT3G28300,AT2G05920,AT3G62030,AT4G23750,AT2G42690,AT1G65960,AT1G13260,AT3G27830,AT3G14210,AT3G16470,AT2G10940,AT1G03130,AT4G32260,AT4G24190,AT5G67290,AT4G01050,AT1G70410,AT1G12000,AT5G38420,AT5G09220,AT2G13790 PAUWELS_NINJA/WT_UP Up-Differentially expressed genes in NINJA vs wild-type plants (Table S3 PubmedID:20360743) AT1G06620,AT1G14250,AT1G18710,AT1G19670,AT1G24070,AT1G52000,AT1G52030,AT1G52040,AT1G52400,AT1G52410,AT1G52890,AT1G53480,AT1G54010,AT1G54020,AT1G61120,AT1G62660,AT1G72120,AT1G73325,AT1G80120,AT2G02990,AT2G16367,AT2G24850,AT2G26010,AT2G26020,AT2G34600,AT2G36080,AT2G37620,AT2G38240,AT2G39030,AT2G43510,AT2G44578,AT3G01345,AT3G04720,AT3G11480,AT3G12145,AT3G16470,AT3G25760,AT3G25770,AT3G28220,AT3G28270,AT3G42658,AT3G51450,AT3G54990,AT3G55970,AT4G02360,AT4G04223,AT4G07812,AT4G11290,AT4G11320,AT4G12480,AT4G12490,AT4G12500,AT4G15610,AT4G16590,AT4G27860,AT5G05600,AT5G10300,AT5G13220,AT5G24420,AT5G24770,AT5G24780,AT5G26270,AT5G44420,AT5G44430,AT5G47220,AT5G63970,AT5G67080,CO048493 PAUWELS_NINJA/WT_DN Down-Differentially expressed genes in NINJA vs wild-type plants (Table S3 PubmedID:20360743) AT1G35230,AT4G15110,AT5G35935,ATCG00840,ATCG00070,AT4G28910 PAUWELS_NINJA/WT-TREATED-CORONATINE_UP Up-Differentially expressed genes in NINJA vs wild-type plants treated with 0.5 ?M coronatine (Table S4 PubmedID:20360743) AT1G02920,AT1G06620,AT1G07930,AT1G14120,AT1G14240,AT1G14250,AT1G15520,AT1G15670,AT1G17380,AT1G17420,AT1G18710,AT1G19680,AT1G24070,AT1G30135,AT1G33960,AT1G35230,AT1G35580,AT1G52000,AT1G52030,AT1G52040,AT1G52380,AT1G52400,AT1G52410,AT1G53480,AT1G54000,AT1G54010,AT1G54020,AT1G54030,AT1G55490,AT1G58270,AT1G61120,AT1G61800,AT1G64160,AT1G68620,AT1G72260,AT1G72450,AT1G79690,AT1G80110,AT2G01450,AT2G03980,AT2G13810,AT2G15760,AT2G16367,AT2G16720,AT2G17500,AT2G18690,AT2G20340,AT2G22200,AT2G22330,AT2G22770,AT2G24850,AT2G25450,AT2G26560,AT2G27690,AT2G29350,AT2G29440,AT2G29460,AT2G30720,AT2G30770,AT2G30830,AT2G30950,AT2G33070,AT2G34600,AT2G37025,AT2G37620,AT2G38240,AT2G39330,AT2G39770,AT2G46680,AT3G01345,AT3G09940,AT3G09950,AT3G11340,AT3G11480,AT3G12145,AT3G14310,AT3G15500,AT3G15730,AT3G15950,AT3G16400,AT3G16420,AT3G16460,AT3G16470,AT3G20370,AT3G22160,AT3G22275,AT3G22740,AT3G25180,AT3G26330,AT3G26830,AT3G26840,AT3G27415,AT3G27809,AT3G28220,AT3G28270,AT3G28290,AT3G42658,AT3G45130,AT3G45140,AT3G47340,AT3G50480,AT3G50930,AT3G54990,AT3G56200,AT3G57260,AT3G59970,AT4G03400,AT4G03420,AT4G04840,AT4G07812,AT4G10500,AT4G11310,AT4G11320,AT4G14365,AT4G16730,AT4G17500,AT4G18950,AT4G21830,AT4G21840,AT4G21910,AT4G23420,AT4G23600,AT4G24190,AT4G25780,AT4G27860,AT4G30270,AT4G31500,AT4G33050,AT4G36950,AT4G37990,AT4G39030,AT5G01900,AT5G02500,AT5G02940,AT5G04590,AT5G07350,AT5G09440,AT5G12340,AT5G13220,AT5G13320,AT5G17990,AT5G22630,AT5G24420,AT5G25250,AT5G26270,AT5G27380,AT5G28237,AT5G28540,AT5G41120,AT5G42020,AT5G43745,AT5G47220,AT5G51070,AT5G60890,AT5G61790,AT5G61890,AT5G63450,AT5G63970,AT5G65380,AT5G67080,ATCG00070,ATCG00640,ATCG00650,ATCG00770,ATCG00810,BP839700,CO048493,H36258,N37480 PAUWELS_NINJA/WT-TREATED-CORONATINE_DN Down-Differentially expressed genes in NINJA vs wild-type plants treated with 0.5 ?M coronatine (Table S4 PubmedID:20360743) AK119050,AT1G07490,AT1G15405,AT1G17090,AT1G22160,AT1G54580,AT1G56650,AT2G04110,AT2G37950,AT3G25597,AT3G55290,AT4G10290,AT4G11911,AT4G15110,AT4G15210,AT4G21870,AT4G28910,AT4G29610,AT4G35160,AT5G02380,AT5G17220,AT5G35935,AT5G41761,AT5G49525,AT5G58310,AT5G63500,AY090965 DEAL_NON-HAIR-CELL_UP Up--related to figure 2. Cell type-enriched genes in non-hair cell genes. (Table S1 PubmedID:20627084) AT2G40470,AT4G29740,AT5G15580,AT3G09280,AT4G03292,AT3G02170,AT2G43880,AT3G12900,AT3G43722,AT4G10115,AT4G29230,AT3G17998,AT3G18000,AT1G73120,AT3G46086,AT3G46270,AT4G30980,AT3G12220,AT2G26695,AT3G21680,AT4G19370,AT2G37700,AT5G35631,AT2G35160,AT5G04970,AT3G06840,AT5G14011,AT3G30222,AT3G61930,AT3G43960,AT3G60220,AT2G33790,AT5G42591,AT5G49100,AT4G30380,AT4G17680,AT3G44784,AT5G36150,AT2G30340,AT2G14820,AT3G12710,AT3G61280,AT3G49550,AT3G27416,AT1G76640,AT5G01734,AT5G46295,AT4G34272,AT2G33006,AT3G07005,AT1G10120,AT4G15290,AT3G58120,AT3G29090,AT3G49130,AT2G27430,AT4G11610,AT3G14370,AT4G14750,AT3G48298,AT2G28050,AT1G06320,AT3G62510,AT1G23650,AT2G39180,AT5G14020,AT5G36140,AT2G28160,AT1G68330,AT3G18360,AT5G19200,AT2G19660,AT3G06890,AT3G60530,AT4G00730,AT5G19100,AT5G26230,AT2G42560,AT4G25250,AT1G31950,AT3G15111,AT3G10720,AT5G13910,AT2G34170,AT4G09465,AT3G11385,AT1G04610,AT1G29610,AT4G19690,AT3G46280,AT3G48260,AT3G21500,AT4G13570,AT3G32036,AT1G61353,AT2G11570,AT3G50640,AT1G07880,AT1G76240,AT3G12820,AT2G26370,AT4G19030,AT1G29600,AT1G01580,AT1G79840,AT2G45050,AT1G66800,AT4G28940,AT5G40847,AT3G05150,AT4G04990,AT3G06868,AT5G19340,AT3G06870,AT3G23470,AT3G17580,AT5G02000,AT3G01516 DEAL_HAIR-CELL_UP Up--related to figure 2. Cell type-enriched genes in hair cell genes (Table S1 PubmedID:20627084) AT3G48346,AT5G54570,AT4G38401,AT1G11190,AT2G14095,AT3G48344,AT2G41905,AT4G33730,AT5G18980,AT2G35890,AT2G34790,AT3G48340,AT4G25820,AT4G18550,AT5G17390,AT3G20460,AT5G05500,AT5G57625,AT5G24140,AT5G23990,AT5G03500,AT3G52820,AT1G79520,AT4G40010,AT5G50260,AT5G16250,AT1G73680,AT5G13250,AT4G00680,AT1G76220,AT1G33350,AT5G46417,AT5G19560,AT1G48930,AT4G26010,AT5G55400,AT5G45880,AT4G22080,AT2G07705,AT1G34520,AT1G05240,AT5G24940,AT2G29620,AT2G03720,AT5G61350,AT3G45010,AT4G38950,AT4G04460,AT5G11740,AT5G67400,AT1G70470,AT4G16620,AT3G13520,AT5G35190,AT1G70460,AT5G23980,AT1G62980,AT1G45145,AT5G24880,AT2G20520,AT4G20160,AT5G54040,AT1G05250,AT3G43930,AT2G05440,AT2G17710,AT4G03156,AT1G23540,AT1G33700,AT5G19790,AT2G22470,AT4G25220,AT3G54870,AT2G15830,AT2G31480,AT5G59320,AT1G30870,AT5G02380,AT1G70450,AT5G46420,AT1G03660,AT5G05840,AT3G49960,AT4G37050,AT5G01520,AT4G38840,AT1G73860,AT2G32610,AT4G31250,AT1G54970,AT5G23035,AT1G75350,AT4G14860,AT2G07671,AT1G34510,AT5G17870,AT1G79860,AT4G18940,AT3G20860,AT2G04520,AT5G04960,AT1G32090,AT5G24510,AT5G61550,AT2G29452,AT5G03640,AT1G16440,AT1G12560,AT5G47450,AT3G62680,AT2G41970,AT1G77000,AT5G49690,AT5G43590,AT1G73750,AT1G07500,AT5G08480,AT1G75500,AT2G21030,AT1G43790,AT3G53350,AT5G65160,AT5G57530,AT5G43150,AT5G46090,AT5G54020,AT4G16240,AT2G22420,AT1G60810,AT3G48520,AT3G14981,AT2G07725,AT3G12540,AT2G14760,AT2G35730,AT1G16445,AT4G38390,AT1G45545,AT5G59390,AT5G18350,AT2G02100,AT1G03610,AT1G73590,AT2G02680,AT2G07751,AT5G19800,AT1G31060,AT2G31560,AT5G06800,AT3G24660,AT1G20180,AT4G17550,AT5G25920,AT1G18720,AT4G12390,AT2G19410,AT1G15100,AT4G29390,AT1G43580,AT1G12040,AT1G48260,AT1G31750,AT4G25160,AT4G33980,AT2G07707,AT4G28530,AT4G27660,AT4G24170,AT1G01530,AT4G00130,AT1G53670,AT1G08340,AT3G30845,AT4G13390,AT3G01950,AT5G07080,AT3G45160,AT2G07675,AT5G38700,AT3G11510,AT5G49700,AT5G58010,AT4G11580,AT4G25190,AT5G19530,AT3G10710,AT3G08770,AT3G43220,AT3G06700,AT3G60330,AT1G79250,AT1G61950,AT3G15700,AT4G34320,AT4G24580,AT2G07687,AT1G09170,AT2G21300,AT1G69240,AT1G02860,AT1G72430,AT5G57540,AT5G52310,AT4G18130,AT2G32060,AT1G02790,AT5G35680,AT4G00690,AT2G01464,AT1G79910,AT1G73530,AT3G10740,AT5G59720,AT5G63270,AT5G10400,AT5G18380,AT1G53625,AT4G33880,AT3G15200,AT2G07689,AT2G07727,AT2G37190,AT1G54290,AT1G44130,AT5G13210,AT4G34580,AT3G04630,AT3G06360,AT3G53990,AT2G44110,AT5G26080,AT3G60280,AT4G15230,AT5G16360,AT4G40090,AT5G54050,AT2G02230,AT2G23100,AT2G39510,AT1G20430,AT4G09320,AT5G42210,AT5G64140,AT4G13250,AT2G12400,AT2G26410,AT4G27657,AT3G06210,AT5G58160,AT5G01050,AT5G43180,AT4G25810,AT5G18630,AT3G60140,AT4G29020,AT5G24879,AT1G55960,AT2G07734,AT5G22880,AT5G16900,AT5G37900,AT1G04160,AT3G51380,AT1G08050,AT5G14570,AT1G70600,AT5G50450,AT5G54760,AT3G09925,AT1G71260,AT5G10336,AT5G49900,AT5G05830,AT5G61130,AT5G06640,AT3G47740,AT3G54590,AT5G15740,AT1G58684,AT2G36830,AT3G14340,AT1G43160,AT5G42510,AT5G56710,AT2G24980,AT2G43510,AT5G15600,AT4G27090,AT2G26670,AT4G30670,AT5G47740,AT2G07741,AT3G53820,AT5G47890,AT4G14780,AT2G25460,AT4G31240,AT1G03650,AT5G52010,AT5G24310,AT3G57520,AT1G67785,AT5G08040,AT1G72720,AT2G24260,AT5G47700,AT5G05420,AT1G74929,AT5G25580,AT1G56045,AT5G41730,AT1G18410,AT2G01090,AT5G04200,AT5G39380,AT3G05500,AT5G09220,AT1G71530,AT2G47270,AT5G24030,AT4G38420,AT3G53150,AT5G40730,AT3G54580,AT2G37370,AT2G19680,AT2G19450,AT1G64480,AT5G46290,AT1G18080,AT5G04000,AT5G65930,AT3G16640,AT2G38790,AT4G28550,AT1G03790,AT5G48760,AT4G11320,AT3G15356,AT5G19810,AT5G40970,AT1G44050,AT5G23030,AT5G17820,AT5G18636,AT4G24026,AT1G04700,AT2G28430,AT5G58420,AT5G54930,AT5G49520,AT1G18540,AT1G15930,AT1G73000,AT2G40205,AT2G46567,AT1G21360,AT5G05410,AT1G68820,AT4G21960,AT5G01870,AT1G30800,AT4G28250,AT5G22410,AT5G54670,AT3G58720,AT5G41080,AT3G18740,AT1G61563,AT3G50970,AT4G31730,AT1G12950,AT1G65610,AT1G55240,AT3G12700,AT1G34490,AT1G61080,AT1G55000,AT1G73770,AT3G01810,AT2G22055,AT4G24570,AT1G77765,AT1G75750,AT5G17590,AT4G18450,AT5G59850,AT1G07860,AT4G16146,AT2G07708,AT5G06760,AT4G36515,AT1G09932,AT5G57685,AT2G07815,AT1G62750,AT3G24110,AT1G48640,AT5G05490,AT3G61300,AT1G25240,AT4G22666,AT2G04063,AT1G32950,AT5G44020,AT1G70710,AT5G11110,AT4G00210,AT2G40080,AT1G75260,AT3G59680,AT1G30840,AT2G39390,AT3G11120,AT2G01250,AT1G54940,AT5G23950,AT5G62100,AT5G59690,AT3G14310,AT3G53020,AT2G23930,AT3G51540,AT4G29140,AT1G77940,AT2G39110,AT3G61260,AT3G63380,AT2G09990,AT3G51325,AT5G48870,AT2G21185,AT4G34720,AT4G21120,AT4G30560,AT5G59910,AT1G10020,AT3G29300,AT2G37670,AT2G18020,AT2G01460,AT5G24270,AT4G01110,AT3G50030,AT5G01530,AT1G01780,AT2G07698,AT3G59350,AT2G07718,AT3G56020,AT4G02390,AT4G32450,AT5G61260,AT4G31985,AT5G03850,AT4G37030,AT1G50930,AT2G42900,AT5G57110,AT3G20570,AT4G02270,AT5G16130,AT2G04390,AT5G14090,AT3G29810,AT3G14770,AT5G09510,AT5G43260,AT1G21090,AT5G06630,AT2G37600,AT2G29450,AT1G30850,AT3G53190,AT3G46320,AT3G56240,AT2G04680,AT1G59359,AT5G01280,AT5G62310,AT1G12150,AT4G36520,AT1G66240,AT1G01750,AT1G12411,AT5G13710,AT2G36620,AT4G22090,AT4G28850,AT2G25060,AT1G74370,AT4G32070,AT4G14320,AT1G75000,AT5G20290,AT5G37260,AT1G65180,AT3G51630,AT3G51632,AT3G09500,AT5G47120,AT2G45470,AT4G16515,AT4G32670,AT5G23040,AT4G39890,AT2G21880,AT1G43170,AT2G36695,AT3G12870,AT2G16890,AT1G23290,AT5G17850,AT1G11580,AT5G26650,AT2G02300,AT5G40690,AT5G61650,AT1G19330,AT1G27400,AT1G35490,AT1G09690,AT4G34480,AT5G48360,AT1G58983,AT5G50530,AT5G15870,AT2G31220,AT1G19230,AT1G55560,AT3G46930,AT2G25625,AT1G60050,AT3G50685,AT3G53430,AT4G07960,AT5G54030,AT4G26690,AT4G21720,AT5G15970,AT4G35985,AT4G31360,AT3G28550,AT3G62250,AT3G26690,AT2G37410,AT3G23870,AT1G61566,AT4G39200,AT2G43230,AT2G16530,AT4G28100,AT1G13110,AT3G13782,AT1G30360,AT1G51405,AT1G59850,AT2G07679,AT4G24960,AT1G65590,AT2G05920,AT1G32940,AT1G05340,AT2G16600,AT5G63310,AT5G13260,AT5G61170,AT2G02130,AT4G35490,AT2G24692,AT3G60130,AT2G07724,AT1G15270,AT5G27770,AT3G58750,AT1G52300,AT3G21560,AT1G62886,AT5G58320,AT5G06990,AT5G14650,AT3G10860,AT5G57200,AT3G04440,AT2G28790,AT3G03290,AT5G14920,AT5G37770,AT1G02660,AT4G16450,AT3G29575,AT5G21170,AT3G09240,AT1G68230,AT1G44800,AT5G57535,AT5G59870,AT5G26270,AT4G37590,AT1G28290,AT1G79110,AT2G16510,AT1G51580,AT4G33420,AT3G04400,AT1G02340,AT3G05490,AT3G03700,AT2G44100,AT5G27700,AT4G02489,AT5G43230,AT5G43570,AT5G42290,AT1G24620,AT4G28405,AT2G07681,AT1G69260,AT4G38080,AT5G04790,AT3G23920,AT1G63600,AT5G18150,AT1G62978,AT4G25100,AT5G63990,AT1G78070,AT1G13930,AT2G34925,AT4G10370,AT1G73370,AT2G35900,AT5G16120,AT5G51060,AT1G44941,AT2G25290,AT4G28150,AT5G49440,AT5G11790,AT5G58750,AT4G04450,AT1G27200,AT5G34850,AT2G19400,AT1G53680,AT4G27350,AT1G54740,AT5G50640,AT5G38610,AT2G23790,AT5G04840,AT1G11160,AT3G07070,AT1G07210,AT2G38500,AT1G09220,AT1G77770,AT5G51270,AT1G29800,AT1G53035,AT5G42980,AT2G25090,AT2G19880,AT2G26420,AT1G53340,AT2G37630,AT3G53560,AT5G25200,AT4G18425,AT5G02390,AT5G24810,AT1G18880,AT2G11270,AT3G19990,AT1G33870,AT5G41740,AT5G56750,AT2G21050,AT2G21620,AT1G57860,AT5G20520,AT5G57080,AT1G67870,AT1G73740,AT4G30790,AT4G33250,AT4G38100,AT2G29020,AT5G49890,AT3G13480,AT3G51090,AT4G37650,AT1G54575,AT1G12370,AT1G16420,AT5G44110,AT4G38495,AT3G03070,AT4G29180,AT5G17650,AT4G15233,AT1G18470,AT5G12140,AT1G20850,AT2G16016,AT3G63130,AT2G16835,AT5G23920,AT2G02840,AT1G09740,AT5G62300,AT1G53560,AT4G16720,AT1G70140,AT2G29570,AT2G26560,AT1G32960,AT3G15580,AT5G01510,AT2G28740,AT1G22530,AT2G19160,AT1G08310,AT5G45440,AT1G35710,AT1G66730,AT2G05510,AT4G00440,AT2G28315,AT4G12690,AT4G31000,AT5G62500,AT1G19500,AT3G03890,AT1G15380,AT1G35680,AT2G44450,AT2G39460,AT1G26360,AT1G62320,AT5G54280,AT5G07030,AT4G14280,AT4G25890,AT3G51250,AT4G26680,AT5G55680,AT4G37150,AT1G19850,AT4G15563,AT4G08400,AT5G18800,AT3G14350,AT2G19750,AT1G26850,AT1G63660,AT2G07787,AT1G76780,AT1G69620,AT4G10480,AT1G21070,AT5G47930,AT5G42140,AT5G15290,AT2G37150,AT1G04270,AT5G51040,AT3G11940,AT5G28630,AT5G62460,AT3G51730,AT5G19570,AT1G58265,AT2G41210,AT2G18700,AT5G15320,AT3G51240,AT5G01480,AT3G12640,AT1G26970,AT2G07702,AT5G02770,AT4G19640,AT3G28720,AT4G29850,AT5G45469,AT5G51380,AT5G07780,AT1G80630,AT4G38060,AT4G34870,AT4G08410,AT2G19730,AT5G01350,AT3G16560,AT1G55690,AT1G12880,AT2G07722,AT1G14420,AT2G17590,AT5G04800,AT5G11100,AT5G14330,AT5G13850,AT5G49270,AT1G21790,AT2G33370,AT4G26230,AT3G21180,AT4G38660,AT1G32920,AT1G59840,AT1G30640,AT1G07770,AT1G11684,AT2G48040,AT1G60390,AT4G27290,AT2G42680,AT3G53890,AT3G28210,AT5G15350,AT1G09590,AT3G27360,AT5G65165,AT1G01453,AT5G08050,AT1G14730,AT5G58005,AT2G47890,AT5G10360,AT4G22780,AT3G08610,AT5G28500,AT5G38850,AT5G16980,AT4G29800,AT2G43610,AT5G64310,AT5G50110,AT2G05220,AT4G20390,AT3G55430,AT3G05590,AT1G31050,AT2G22170,AT5G58920,AT1G78720,AT1G31020,AT1G29760,AT5G18970,AT4G18640,AT5G04040,AT5G51110,AT1G54530,AT1G74050,AT5G65040,AT1G57990,AT4G31310,AT1G20620,AT2G05160,AT1G52660,AT1G17540,AT4G11150,AT5G64630,AT1G23720,AT4G29410,AT5G22800,AT1G14320,AT4G22920,AT3G51720,AT1G70360,AT1G77690,AT3G13120,AT5G46100,AT1G50890,AT1G05260,AT3G05580,AT2G17360,AT4G20270,AT3G14395,AT1G52590,AT5G01610,AT5G42570,AT1G75160,AT1G57570,AT5G25810,AT1G67070,AT1G29230,AT3G02140,AT2G31260,AT5G65990,AT4G11230,AT5G23390,AT4G21192,AT5G02350,AT5G08640,AT1G56300,AT2G32510,AT1G73760,AT5G27541,AT1G67700,AT4G39730,AT1G48270,AT5G18910,AT3G02220,AT3G51740,AT5G67630,AT4G25790,AT4G28740,AT5G40860,AT5G46060,AT4G34588,AT4G34590,AT5G50280,AT5G65270,AT5G58290,AT5G14420,AT1G13040,AT2G05720,AT2G27530,AT5G57290,AT5G65090,AT5G19590,AT5G35530,AT1G51880,AT1G29520,AT1G79330,AT5G38650,AT1G62440,AT4G16500,AT1G55915,AT5G07280,AT5G37780,AT3G47040,AT5G09310,AT1G68450,AT1G59860,AT5G14380,AT1G59218,AT3G56891,AT2G07835,AT2G40765,AT2G21580,AT5G37500 TIWARI_2X4_BOTH-PLATFORM_UP Up-2x4-List of genes that are upregulated or downregulated in both the platforms. (Table S3 PubmedID:20406451) AT1G02980,AT1G03445,AT1G04040,AT1G06720,AT1G09360,AT1G13680,AT1G17020,AT1G17770,AT1G19900,AT1G19950,AT1G21670,AT1G22090,AT1G23410,AT1G26770,AT1G29080,AT1G30710,AT1G43000,AT1G44090,AT1G44130,AT1G48010,AT1G51990,AT1G59670,AT1G60985,AT1G65300,AT1G65330,AT1G65890,AT1G67820,AT1G67830,AT1G69190,AT1G69530,AT1G70170,AT1G71770,AT1G72580,AT1G73360,AT1G73560,AT1G73610,AT1G74670,AT1G77510,AT1G78000,AT1G78390,AT1G80110,AT1G80330,AT2G02000,AT2G02010,AT2G02490,AT2G02515,AT2G03190,AT2G05380,AT2G05910,AT2G15260,AT2G15740,AT2G18210,AT2G18490,AT2G20170,AT2G21420,AT2G23170,AT2G24740,AT2G25330,AT2G25700,AT2G26050,AT2G30730,AT2G30810,AT2G32340,AT2G34840,AT2G36560,AT2G39640,AT2G39980,AT2G40610,AT2G43670,AT2G43820,AT2G45110,AT2G46690,AT3G02670,AT3G03410,AT3G05460,AT3G05860,AT3G10780,AT3G11920,AT3G15490,AT3G17150,AT3G18830,AT3G20030,AT3G21410,AT3G24220,AT3G24510,AT3G25280,AT3G25990,AT3G26210,AT3G26270,AT3G47800,AT3G48950,AT3G49770,AT3G52480,AT3G56520,AT3G57160,AT3G57270,AT3G59790,AT3G60700,AT3G60730,AT3G62350,AT4G02380,AT4G02710,AT4G10270,AT4G16160,AT4G16500,AT4G17215,AT4G18870,AT4G19430,AT4G21480,AT4G24780,AT4G25530,AT4G26470,AT4G27890,AT4G29285,AT4G31500,AT4G31900,AT4G32105,AT4G35725,AT4G36590,AT4G36740,AT4G37360,AT4G37950,AT4G39650,AT5G01210,AT5G05030,AT5G05260,AT5G09370,AT5G09480,AT5G09730,AT5G10440,AT5G12070,AT5G14960,AT5G20430,AT5G20710,AT5G27330,AT5G34883,AT5G34885,AT5G39560,AT5G40040,AT5G40155,AT5G40710,AT5G40730,AT5G42910,AT5G43580,AT5G44020,AT5G44820,AT5G45690,AT5G46950,AT5G48850,AT5G50260,AT5G50480,AT5G54220,AT5G57780,AT5G57785,AT5G58860,AT5G64710,AT5G65370 TIWARI_2X4_BOTH-PLATFORM_DN Down-2x4-List of genes that are upregulated or downregulated in both the platforms. (Table S3 PubmedID:20406451) AT1G02810,AT1G02820,AT1G04240,AT1G07400,AT1G14280,AT1G14480,AT1G18740,AT1G20823,AT1G27200,AT1G27730,AT1G27770,AT1G32170,AT1G32900,AT1G33760,AT1G35140,AT1G35210,AT1G43040,AT1G50040,AT1G54050,AT1G56540,AT1G57590,AT1G66400,AT1G72240,AT1G72430,AT1G80130,AT2G02850,AT2G05940,AT2G22500,AT2G23810,AT2G25060,AT2G27080,AT2G32140,AT2G33380,AT2G39650,AT2G41010,AT2G41640,AT2G43290,AT2G47440,AT3G04640,AT3G10930,AT3G12580,AT3G14200,AT3G19680,AT3G23170,AT3G23840,AT3G28340,AT3G43430,AT3G44630,AT3G45320,AT3G45640,AT3G46530,AT3G50060,AT3G50930,AT3G54810,AT3G55980,AT3G56710,AT3G57070,AT3G57530,AT3G61190,AT3G62720,AT4G03400,AT4G11280,AT4G11780,AT4G13800,AT4G17490,AT4G17500,AT4G24380,AT4G24570,AT4G27280,AT4G27654,AT4G29780,AT4G30440,AT4G34150,AT4G37260,AT5G04530,AT5G06320,AT5G19240,AT5G20740,AT5G24150,AT5G25240,AT5G37770,AT5G44350,AT5G46470,AT5G47230,AT5G48570,AT5G51190,AT5G54470,AT5G54490,AT5G57070,AT5G57560,AT5G58770,AT5G61600,AT5G67300 TIWARI_2X6_BOTH-PLATFORM_UP Up-2x6-List of genes that are upregulated or downregulated in both the platforms. (Table S3 PubmedID:20406451) AT1G01200,AT1G01530,AT1G01600,AT1G02790,AT1G03170,AT1G03445,AT1G04680,AT1G06020,AT1G11850,AT1G13680,AT1G13950,AT1G15380,AT1G15430,AT1G16290,AT1G16980,AT1G17770,AT1G17800,AT1G21910,AT1G22015,AT1G22090,AT1G23080,AT1G26610,AT1G28400,AT1G30040,AT1G35720,AT1G41830,AT1G44090,AT1G44130,AT1G47480,AT1G48010,AT1G48910,AT1G50040,AT1G52030,AT1G52040,AT1G52400,AT1G54020,AT1G55020,AT1G55560,AT1G55600,AT1G56620,AT1G60570,AT1G60590,AT1G60985,AT1G62360,AT1G63220,AT1G64220,AT1G64670,AT1G65300,AT1G65330,AT1G65450,AT1G65900,AT1G67750,AT1G67830,AT1G69190,AT1G69490,AT1G71770,AT1G72080,AT1G72110,AT1G72970,AT1G73560,AT1G73610,AT1G74000,AT1G74010,AT1G74990,AT1G75270,AT1G75880,AT1G75900,AT1G76880,AT1G77210,AT1G77510,AT1G77690,AT1G77870,AT1G77990,AT1G78000,AT1G78460,AT1G78815,AT1G79370,AT1G79960,AT1G80330,AT2G02000,AT2G02010,AT2G02230,AT2G02490,AT2G02515,AT2G05540,AT2G12940,AT2G13680,AT2G15340,AT2G15740,AT2G17090,AT2G18490,AT2G19500,AT2G20595,AT2G22470,AT2G23170,AT2G24762,AT2G25330,AT2G25700,AT2G25790,AT2G26050,AT2G27080,AT2G28880,AT2G28900,AT2G29330,AT2G29340,AT2G30810,AT2G31780,AT2G32690,AT2G33620,AT2G34440,AT2G34840,AT2G36270,AT2G36560,AT2G37540,AT2G39210,AT2G39640,AT2G39980,AT2G41290,AT2G42270,AT2G42490,AT2G43570,AT2G43670,AT2G44130,AT2G44460,AT2G44470,AT2G45110,AT2G46375,AT2G47030,AT2G47040,AT2G47050,AT3G01240,AT3G02670,AT3G03450,AT3G04100,AT3G04280,AT3G04290,AT3G05460,AT3G05860,AT3G07820,AT3G10240,AT3G10780,AT3G11150,AT3G11920,AT3G12520,AT3G12700,AT3G13730,AT3G14530,AT3G14550,AT3G14850,AT3G14940,AT3G15357,AT3G16110,AT3G16520,AT3G17150,AT3G17600,AT3G17710,AT3G18560,AT3G19350,AT3G19390,AT3G21410,AT3G21500,AT3G22120,AT3G23050,AT3G24210,AT3G24510,AT3G25160,AT3G25170,AT3G26110,AT3G26940,AT3G28210,AT3G28750,AT3G28830,AT3G28850,AT3G29570,AT3G44990,AT3G46840,AT3G46860,AT3G47800,AT3G49270,AT3G49770,AT3G52780,AT3G54260,AT3G54700,AT3G57160,AT3G57270,AT3G58540,AT3G59480,AT3G60140,AT3G62170,AT3G63200,AT4G02300,AT4G02780,AT4G08950,AT4G16480,AT4G16500,AT4G17500,AT4G18910,AT4G18970,AT4G20200,AT4G20830,AT4G20840,AT4G21390,AT4G21480,AT4G22730,AT4G23496,AT4G23520,AT4G25530,AT4G25900,AT4G28040,AT4G28680,AT4G29285,AT4G29550,AT4G29700,AT4G30070,AT4G30380,AT4G30430,AT4G30650,AT4G31900,AT4G32105,AT4G33830,AT4G33840,AT4G35725,AT4G36590,AT4G36740,AT4G37360,AT4G39320,AT4G39650,AT5G01180,AT5G01870,AT5G02580,AT5G03510,AT5G05260,AT5G06720,AT5G07030,AT5G07110,AT5G07410,AT5G07430,AT5G09360,AT5G09370,AT5G09730,AT5G10170,AT5G10440,AT5G11540,AT5G12070,AT5G13620,AT5G14130,AT5G14470,AT5G14920,AT5G14960,AT5G15140,AT5G15160,AT5G18170,AT5G19290,AT5G19580,AT5G19600,AT5G19700,AT5G20430,AT5G20710,AT5G20740,AT5G22270,AT5G24316,AT5G25620,AT5G26220,AT5G26630,AT5G34883,AT5G34885,AT5G34940,AT5G35550,AT5G37300,AT5G39880,AT5G40040,AT5G40260,AT5G41610,AT5G46950,AT5G47350,AT5G50160,AT5G50480,AT5G54220,AT5G58080,AT5G58660,AT5G59810,AT5G60440,AT5G60780,AT5G63070,AT5G63990,AT5G64080,AT5G64890,AT5G65420 TIWARI_2X6_BOTH-PLATFORM_DN Down-2x6-List of genes that are upregulated or downregulated in both the platforms. (Table S3 PubmedID:20406451) AT1G01090,AT1G01900,AT1G02110,AT1G02730,AT1G02800,AT1G03440,AT1G03457,AT1G03470,AT1G04110,AT1G04380,AT1G04645,AT1G04660,AT1G05370,AT1G05440,AT1G06170,AT1G07370,AT1G08560,AT1G08630,AT1G09380,AT1G10030,AT1G11070,AT1G12080,AT1G12200,AT1G13730,AT1G14580,AT1G14687,AT1G14900,AT1G16070,AT1G16330,AT1G16500,AT1G17050,AT1G18370,AT1G18520,AT1G20070,AT1G20690,AT1G21970,AT1G22590,AT1G23205,AT1G25510,AT1G26210,AT1G28170,AT1G28600,AT1G30690,AT1G31460,AT1G32190,AT1G33055,AT1G33940,AT1G34245,AT1G34355,AT1G43640,AT1G44110,AT1G44830,AT1G48930,AT1G50240,AT1G50420,AT1G50490,AT1G50650,AT1G51960,AT1G52670,AT1G52810,AT1G53070,AT1G53380,AT1G53390,AT1G53520,AT1G56170,AT1G59540,AT1G64450,AT1G64660,AT1G65090,AT1G65240,AT1G66250,AT1G67810,AT1G68510,AT1G68560,AT1G69910,AT1G70780,AT1G70830,AT1G70840,AT1G71030,AT1G71120,AT1G71690,AT1G72250,AT1G72580,AT1G72670,AT1G73220,AT1G74960,AT1G75240,AT1G75250,AT1G75750,AT1G76540,AT1G76740,AT1G77580,AT1G77590,AT1G77780,AT1G80530,AT2G02070,AT2G02100,AT2G02850,AT2G06255,AT2G07180,AT2G16270,AT2G16580,AT2G17750,AT2G21420,AT2G22610,AT2G22660,AT2G22840,AT2G23190,AT2G23570,AT2G23750,AT2G24580,AT2G25060,AT2G25735,AT2G26760,AT2G27040,AT2G28380,AT2G28620,AT2G28720,AT2G29550,AT2G30200,AT2G30590,AT2G31010,AT2G32370,AT2G32440,AT2G32460,AT2G32990,AT2G33560,AT2G33880,AT2G33990,AT2G34190,AT2G34700,AT2G34960,AT2G35880,AT2G36200,AT2G37380,AT2G38760,AT2G38870,AT2G39690,AT2G40220,AT2G40540,AT2G41190,AT2G42110,AT2G43870,AT2G44240,AT2G44250,AT2G45400,AT2G45420,AT2G45430,AT2G45600,AT2G45830,AT2G47920,AT3G02120,AT3G02590,AT3G02640,AT3G03130,AT3G05500,AT3G06030,AT3G07920,AT3G08900,AT3G10320,AT3G10880,AT3G10910,AT3G11160,AT3G11180,AT3G11340,AT3G11520,AT3G11740,AT3G12110,AT3G12870,AT3G13450,AT3G13510,AT3G13960,AT3G14190,AT3G14205,AT3G14360,AT3G14760,AT3G15560,AT3G15690,AT3G17360,AT3G17840,AT3G18035,AT3G19590,AT3G19660,AT3G19820,AT3G20150,AT3G20270,AT3G20340,AT3G20950,AT3G21620,AT3G22880,AT3G23670,AT3G24650,AT3G25110,AT3G25860,AT3G25980,AT3G26300,AT3G26590,AT3G26744,AT3G26790,AT3G27330,AT3G27785,AT3G28150,AT3G28155,AT3G29770,AT3G42725,AT3G44050,AT3G44830,AT3G45000,AT3G45690,AT3G46500,AT3G48350,AT3G48360,AT3G48580,AT3G50070,AT3G50990,AT3G51280,AT3G51290,AT3G51740,AT3G51890,AT3G52110,AT3G52970,AT3G53380,AT3G53540,AT3G53900,AT3G54140,AT3G54320,AT3G54770,AT3G55060,AT3G55560,AT3G55660,AT3G56100,AT3G58650,AT3G61610,AT3G62110,AT3G63300,AT4G00180,AT4G00220,AT4G00370,AT4G00710,AT4G01140,AT4G01730,AT4G02800,AT4G03100,AT4G03110,AT4G03210,AT4G03270,AT4G04460,AT4G05190,AT4G08780,AT4G11080,AT4G11140,AT4G14770,AT4G15140,AT4G15680,AT4G16563,AT4G16780,AT4G16980,AT4G17695,AT4G17720,AT4G19460,AT4G21430,AT4G21690,AT4G22250,AT4G23750,AT4G23800,AT4G26660,AT4G27250,AT4G27450,AT4G27550,AT4G28100,AT4G28130,AT4G28180,AT4G28190,AT4G28365,AT4G28950,AT4G29140,AT4G29230,AT4G30090,AT4G30130,AT4G31610,AT4G31840,AT4G32830,AT4G32870,AT4G33330,AT4G34950,AT4G35070,AT4G35560,AT4G35730,AT4G37750,AT4G37760,AT4G38000,AT4G38660,AT4G39670,AT4G39780,AT4G39800,AT5G01280,AT5G01370,AT5G02100,AT5G02220,AT5G05030,AT5G05180,AT5G06150,AT5G06530,AT5G07180,AT5G07210,AT5G07260,AT5G07280,AT5G07500,AT5G07510,AT5G07810,AT5G07880,AT5G08450,AT5G09510,AT5G10160,AT5G10300,AT5G10510,AT5G11230,AT5G11460,AT5G11510,AT5G11780,AT5G13170,AT5G13600,AT5G13790,AT5G13840,AT5G14180,AT5G14450,AT5G14640,AT5G14980,AT5G15190,AT5G15530,AT5G17160,AT5G17540,AT5G18700,AT5G18840,AT5G22810,AT5G24570,AT5G25090,AT5G26790,AT5G27920,AT5G28640,AT5G38280,AT5G39440,AT5G39890,AT5G40030,AT5G40155,AT5G40460,AT5G40610,AT5G40640,AT5G42250,AT5G43780,AT5G44480,AT5G46290,AT5G46880,AT5G47020,AT5G47550,AT5G47600,AT5G48100,AT5G48310,AT5G48720,AT5G49460,AT5G50730,AT5G50770,AT5G51210,AT5G52500,AT5G52920,AT5G54060,AT5G54280,AT5G55520,AT5G55590,AT5G56580,AT5G56970,AT5G57260,AT5G57550,AT5G57920,AT5G58070,AT5G59010,AT5G59845,AT5G60690,AT5G60840,AT5G61260,AT5G62150,AT5G62550,AT5G62630,AT5G64310,AT5G65040,AT5G65510,AT5G65710,AT5G66230,AT5G66320,AT5G66330,AT5G66750,AT5G66985 TIWARI_FIS1X2_BOTH-PLATFORM_UP Up-fis1x2-List of genes that are upregulated or downregulated in both the platforms. (Table S3 PubmedID:20406451) AT1G01300,AT1G01530,AT1G01570,AT1G02205,AT1G02450,AT1G03170,AT1G03445,AT1G04040,AT1G04680,AT1G05770,AT1G06020,AT1G07050,AT1G08410,AT1G09360,AT1G09390,AT1G11330,AT1G11850,AT1G11860,AT1G13280,AT1G13420,AT1G13680,AT1G13920,AT1G13930,AT1G14150,AT1G14880,AT1G16980,AT1G17260,AT1G17770,AT1G17800,AT1G17960,AT1G19050,AT1G19570,AT1G19670,AT1G19960,AT1G20010,AT1G20680,AT1G22015,AT1G22090,AT1G22740,AT1G23080,AT1G23480,AT1G27540,AT1G28110,AT1G28680,AT1G29080,AT1G29450,AT1G29660,AT1G29670,AT1G30040,AT1G30250,AT1G30520,AT1G30760,AT1G31290,AT1G32220,AT1G32470,AT1G35310,AT1G35720,AT1G35910,AT1G44090,AT1G44130,AT1G47480,AT1G48010,AT1G48100,AT1G48750,AT1G49430,AT1G49750,AT1G52030,AT1G52040,AT1G52290,AT1G52470,AT1G52590,AT1G54410,AT1G54430,AT1G55600,AT1G56160,AT1G56620,AT1G57750,AT1G58807,AT1G59124,AT1G59660,AT1G60570,AT1G60590,AT1G60985,AT1G61680,AT1G61800,AT1G62800,AT1G63220,AT1G63710,AT1G64640,AT1G65060,AT1G65300,AT1G65330,AT1G65445,AT1G65450,AT1G66350,AT1G67350,AT1G67750,AT1G67830,AT1G69190,AT1G69720,AT1G69830,AT1G70985,AT1G71030,AT1G71720,AT1G71770,AT1G72260,AT1G72610,AT1G72970,AT1G73560,AT1G73610,AT1G74000,AT1G74010,AT1G74670,AT1G75040,AT1G75580,AT1G75900,AT1G76080,AT1G77510,AT1G77870,AT1G78040,AT1G78090,AT1G78170,AT1G78780,AT1G79960,AT1G80050,AT1G80110,AT1G80330,AT2G02000,AT2G02010,AT2G02490,AT2G02515,AT2G03190,AT2G10940,AT2G14900,AT2G15740,AT2G19500,AT2G20595,AT2G21560,AT2G24740,AT2G25700,AT2G26050,AT2G27190,AT2G28700,AT2G28880,AT2G28900,AT2G28950,AT2G30810,AT2G33810,AT2G34440,AT2G35150,AT2G35370,AT2G36190,AT2G36270,AT2G37540,AT2G39470,AT2G39640,AT2G40150,AT2G40610,AT2G40750,AT2G42490,AT2G43530,AT2G43550,AT2G43570,AT2G43670,AT2G44460,AT2G45110,AT2G46140,AT2G46375,AT3G01550,AT3G02570,AT3G02670,AT3G02885,AT3G04100,AT3G04280,AT3G04290,AT3G05460,AT3G05800,AT3G05860,AT3G06140,AT3G09270,AT3G09540,AT3G10780,AT3G11210,AT3G11920,AT3G14520,AT3G14530,AT3G14550,AT3G14850,AT3G15490,AT3G16110,AT3G16180,AT3G17150,AT3G17600,AT3G18080,AT3G18560,AT3G18980,AT3G19350,AT3G19930,AT3G20230,AT3G21410,AT3G21500,AT3G22060,AT3G22120,AT3G22231,AT3G23050,AT3G23060,AT3G24510,AT3G25160,AT3G25180,AT3G26932,AT3G26960,AT3G28960,AT3G29320,AT3G30420,AT3G43670,AT3G44100,AT3G44990,AT3G45690,AT3G46540,AT3G46860,AT3G47295,AT3G49270,AT3G49770,AT3G50400,AT3G50660,AT3G51030,AT3G51150,AT3G51600,AT3G52500,AT3G53130,AT3G53140,AT3G55630,AT3G55740,AT3G55800,AT3G55970,AT3G56400,AT3G56490,AT3G57160,AT3G57270,AT3G58550,AT3G58780,AT3G59030,AT3G59480,AT3G60140,AT3G60290,AT3G61250,AT3G63140,AT3G63200,AT4G00890,AT4G01080,AT4G01680,AT4G02300,AT4G02780,AT4G04330,AT4G04890,AT4G08950,AT4G09020,AT4G10950,AT4G12550,AT4G12970,AT4G14910,AT4G15040,AT4G16447,AT4G16480,AT4G16590,AT4G17090,AT4G18390,AT4G18910,AT4G18970,AT4G19120,AT4G19240,AT4G20050,AT4G20200,AT4G20270,AT4G21280,AT4G21450,AT4G21480,AT4G21760,AT4G23370,AT4G23496,AT4G23520,AT4G23670,AT4G24130,AT4G24350,AT4G24780,AT4G25530,AT4G26430,AT4G26530,AT4G29285,AT4G30070,AT4G30650,AT4G31900,AT4G32105,AT4G32170,AT4G32800,AT4G33830,AT4G33840,AT4G34760,AT4G34940,AT4G35725,AT4G36250,AT4G36590,AT4G37360,AT4G37610,AT4G37800,AT4G38770,AT4G39590,AT4G39650,AT5G01015,AT5G01180,AT5G01210,AT5G01870,AT5G02160,AT5G02540,AT5G05690,AT5G05960,AT5G06510,AT5G07030,AT5G07240,AT5G09370,AT5G09730,AT5G10170,AT5G10440,AT5G10760,AT5G11420,AT5G11540,AT5G12070,AT5G13620,AT5G14470,AT5G14650,AT5G14740,AT5G14920,AT5G15140,AT5G15160,AT5G15230,AT5G15310,AT5G15970,AT5G16030,AT5G17220,AT5G17700,AT5G18000,AT5G18060,AT5G19600,AT5G20430,AT5G20630,AT5G20710,AT5G20740,AT5G24316,AT5G24420,AT5G25390,AT5G25500,AT5G26630,AT5G27290,AT5G34940,AT5G35550,AT5G37130,AT5G37300,AT5G38620,AT5G40040,AT5G40260,AT5G41870,AT5G43830,AT5G44500,AT5G44520,AT5G44680,AT5G44870,AT5G46300,AT5G46830,AT5G46950,AT5G47350,AT5G47640,AT5G48350,AT5G48800,AT5G50335,AT5G50820,AT5G50950,AT5G50990,AT5G51440,AT5G51750,AT5G51850,AT5G52100,AT5G52320,AT5G52810,AT5G53830,AT5G54160,AT5G54220,AT5G54290,AT5G54770,AT5G57630,AT5G57780,AT5G57785,AT5G58782,AT5G60440,AT5G62350,AT5G62360,AT5G62920,AT5G64890,AT5G65390,AT5G65420,AT5G66040,AT5G67180 TIWARI_FIS1X2_BOTH-PLATFORM_DN Down-fis1x2-List of genes that are upregulated or downregulated in both the platforms. (Table S3 PubmedID:20406451) AT1G01900,AT1G02110,AT1G02190,AT1G02700,AT1G02810,AT1G02850,AT1G03055,AT1G03380,AT1G03440,AT1G03457,AT1G03470,AT1G03880,AT1G04110,AT1G04380,AT1G04660,AT1G05370,AT1G05440,AT1G06170,AT1G08560,AT1G08650,AT1G09380,AT1G10060,AT1G11210,AT1G12010,AT1G12080,AT1G14260,AT1G14687,AT1G14970,AT1G16090,AT1G16770,AT1G17020,AT1G17060,AT1G17310,AT1G18370,AT1G18520,AT1G19210,AT1G19930,AT1G20080,AT1G20310,AT1G20780,AT1G20823,AT1G20970,AT1G21460,AT1G21970,AT1G22810,AT1G22990,AT1G23560,AT1G23580,AT1G23710,AT1G24110,AT1G24600,AT1G27040,AT1G27200,AT1G27680,AT1G27730,AT1G28590,AT1G28600,AT1G30020,AT1G30370,AT1G30900,AT1G31040,AT1G31440,AT1G31460,AT1G31820,AT1G32090,AT1G32190,AT1G32540,AT1G32860,AT1G33055,AT1G33440,AT1G33700,AT1G33720,AT1G34245,AT1G35210,AT1G35560,AT1G44110,AT1G44170,AT1G44830,AT1G47840,AT1G48180,AT1G48580,AT1G48850,AT1G48930,AT1G49390,AT1G49660,AT1G49830,AT1G49870,AT1G50420,AT1G50460,AT1G50650,AT1G51340,AT1G51440,AT1G52570,AT1G52760,AT1G52800,AT1G52810,AT1G53380,AT1G53520,AT1G53870,AT1G53890,AT1G54100,AT1G54840,AT1G55280,AT1G55740,AT1G55760,AT1G56170,AT1G58070,AT1G58370,AT1G59700,AT1G59710,AT1G59900,AT1G60190,AT1G60970,AT1G61110,AT1G61840,AT1G62340,AT1G62540,AT1G62570,AT1G62710,AT1G62830,AT1G62900,AT1G63100,AT1G63140,AT1G63210,AT1G63840,AT1G63880,AT1G64360,AT1G64500,AT1G64660,AT1G64810,AT1G65390,AT1G66160,AT1G66250,AT1G66400,AT1G66760,AT1G67100,AT1G67360,AT1G67623,AT1G67810,AT1G67880,AT1G68220,AT1G68380,AT1G68510,AT1G69480,AT1G69610,AT1G69860,AT1G69870,AT1G70830,AT1G71120,AT1G72430,AT1G72600,AT1G72660,AT1G72670,AT1G73220,AT1G73260,AT1G74360,AT1G74450,AT1G75080,AT1G75240,AT1G75250,AT1G76130,AT1G76180,AT1G76470,AT1G76740,AT1G77580,AT1G78260,AT1G78700,AT1G78960,AT1G79000,AT1G79410,AT1G80080,AT1G80510,AT1G80530,AT2G01580,AT2G01710,AT2G01770,AT2G02100,AT2G03890,AT2G04160,AT2G06255,AT2G07777,AT2G10970,AT2G14095,AT2G16530,AT2G16580,AT2G16660,AT2G17330,AT2G17430,AT2G17500,AT2G17660,AT2G18630,AT2G18640,AT2G18690,AT2G19050,AT2G19450,AT2G20515,AT2G20880,AT2G21420,AT2G22000,AT2G22500,AT2G22560,AT2G22660,AT2G22810,AT2G22840,AT2G23560,AT2G23570,AT2G23620,AT2G23800,AT2G24580,AT2G24600,AT2G24610,AT2G25060,AT2G25450,AT2G25510,AT2G25680,AT2G26180,AT2G26760,AT2G27080,AT2G27500,AT2G28120,AT2G28270,AT2G28350,AT2G28400,AT2G28620,AT2G28720,AT2G28840,AT2G28960,AT2G29370,AT2G30210,AT2G30470,AT2G30590,AT2G32140,AT2G32460,AT2G32990,AT2G33070,AT2G34190,AT2G34340,AT2G34500,AT2G34700,AT2G34960,AT2G35290,AT2G36220,AT2G37090,AT2G37760,AT2G37770,AT2G37870,AT2G38370,AT2G38380,AT2G38390,AT2G38465,AT2G38870,AT2G39690,AT2G40140,AT2G40955,AT2G41040,AT2G41640,AT2G42110,AT2G42150,AT2G42250,AT2G42430,AT2G42840,AT2G43870,AT2G44430,AT2G45190,AT2G45400,AT2G45420,AT2G45430,AT2G45550,AT2G45760,AT2G45830,AT2G45930,AT2G46530,AT2G46680,AT2G47650,AT2G47810,AT2G47920,AT2G48140,AT3G01570,AT3G02590,AT3G02640,AT3G03840,AT3G04200,AT3G04360,AT3G04640,AT3G05020,AT3G05140,AT3G05180,AT3G05390,AT3G05500,AT3G06100,AT3G06810,AT3G06890,AT3G06895,AT3G08900,AT3G09260,AT3G10460,AT3G10930,AT3G11160,AT3G11180,AT3G11520,AT3G12580,AT3G13065,AT3G13980,AT3G14280,AT3G14360,AT3G14680,AT3G14760,AT3G15560,AT3G16280,AT3G17520,AT3G17790,AT3G18270,AT3G19140,AT3G19230,AT3G19515,AT3G20015,AT3G20270,AT3G20300,AT3G21510,AT3G21520,AT3G21620,AT3G21670,AT3G21690,AT3G21770,AT3G21790,AT3G22910,AT3G23260,AT3G23590,AT3G24520,AT3G24650,AT3G24720,AT3G24850,AT3G25980,AT3G26070,AT3G26290,AT3G26744,AT3G26790,AT3G27325,AT3G27540,AT3G27785,AT3G28150,AT3G28340,AT3G28980,AT3G29770,AT3G42670,AT3G42725,AT3G43430,AT3G43790,AT3G43820,AT3G43860,AT3G44250,AT3G44450,AT3G44630,AT3G44830,AT3G45130,AT3G45420,AT3G45490,AT3G45730,AT3G45860,AT3G46280,AT3G46480,AT3G46530,AT3G46580,AT3G46880,AT3G47110,AT3G47620,AT3G48350,AT3G48460,AT3G48910,AT3G49630,AT3G50070,AT3G50310,AT3G50440,AT3G50560,AT3G50570,AT3G50780,AT3G50930,AT3G50980,AT3G51110,AT3G51280,AT3G51290,AT3G51740,AT3G52110,AT3G52400,AT3G52910,AT3G52920,AT3G52970,AT3G53900,AT3G54320,AT3G54500,AT3G55660,AT3G55980,AT3G56100,AT3G56240,AT3G57530,AT3G57780,AT3G58650,AT3G59220,AT3G59370,AT3G59710,AT3G60110,AT3G60840,AT3G61190,AT3G61220,AT3G61300,AT3G61610,AT3G61930,AT3G62930,AT4G00220,AT4G00650,AT4G00950,AT4G01130,AT4G01140,AT4G01420,AT4G01430,AT4G01840,AT4G02075,AT4G02130,AT4G02800,AT4G03050,AT4G03100,AT4G03110,AT4G03400,AT4G04460,AT4G04970,AT4G05050,AT4G08290,AT4G08780,AT4G10640,AT4G11080,AT4G11130,AT4G11140,AT4G12010,AT4G12110,AT4G13345,AT4G13580,AT4G13800,AT4G14690,AT4G14770,AT4G15096,AT4G15140,AT4G15240,AT4G15280,AT4G15380,AT4G15680,AT4G16780,AT4G16860,AT4G16940,AT4G17490,AT4G17500,AT4G17810,AT4G18280,AT4G18580,AT4G18650,AT4G18740,AT4G18980,AT4G19460,AT4G20030,AT4G20070,AT4G20260,AT4G20480,AT4G20820,AT4G21100,AT4G21430,AT4G21600,AT4G21680,AT4G21870,AT4G21900,AT4G22130,AT4G22250,AT4G22790,AT4G22860,AT4G23010,AT4G24220,AT4G24380,AT4G24570,AT4G24760,AT4G25100,AT4G25140,AT4G25470,AT4G26180,AT4G26660,AT4G27250,AT4G27280,AT4G28085,AT4G28100,AT4G28130,AT4G28190,AT4G28365,AT4G28370,AT4G28650,AT4G28950,AT4G29140,AT4G29230,AT4G29780,AT4G30040,AT4G30090,AT4G30130,AT4G30200,AT4G30420,AT4G30460,AT4G30500,AT4G30640,AT4G30670,AT4G30993,AT4G31320,AT4G31550,AT4G31710,AT4G31840,AT4G32070,AT4G32230,AT4G32240,AT4G32290,AT4G32730,AT4G32890,AT4G33130,AT4G33360,AT4G33730,AT4G34160,AT4G34520,AT4G35070,AT4G35560,AT4G35590,AT4G35650,AT4G35730,AT4G36640,AT4G37295,AT4G37310,AT4G37320,AT4G37330,AT4G37430,AT4G37490,AT4G37530,AT4G38000,AT4G39070,AT4G39390,AT4G39780,AT4G40090,AT5G01300,AT5G01370,AT5G01910,AT5G02070,AT5G02260,AT5G03190,AT5G03200,AT5G03210,AT5G03230,AT5G03240,AT5G03870,AT5G04330,AT5G05180,AT5G06150,AT5G06440,AT5G06570,AT5G07010,AT5G07260,AT5G07280,AT5G07500,AT5G10030,AT5G10120,AT5G10310,AT5G10510,AT5G10580,AT5G10695,AT5G11320,AT5G13170,AT5G13600,AT5G13790,AT5G13820,AT5G14180,AT5G14450,AT5G14640,AT5G15180,AT5G15190,AT5G15530,AT5G18750,AT5G20790,AT5G20810,AT5G22300,AT5G22310,AT5G22810,AT5G22860,AT5G23020,AT5G23490,AT5G24030,AT5G24090,AT5G24120,AT5G24150,AT5G24860,AT5G24890,AT5G24940,AT5G25090,AT5G25120,AT5G25240,AT5G25490,AT5G25860,AT5G26230,AT5G26770,AT5G28510,AT5G28640,AT5G33290,AT5G33300,AT5G35735,AT5G36110,AT5G36220,AT5G36710,AT5G36800,AT5G37540,AT5G37600,AT5G37790,AT5G37870,AT5G38610,AT5G39100,AT5G39200,AT5G39520,AT5G40030,AT5G40210,AT5G40460,AT5G41370,AT5G41660,AT5G42200,AT5G42390,AT5G43170,AT5G43440,AT5G43450,AT5G43600,AT5G43870,AT5G44010,AT5G44110,AT5G44480,AT5G44610,AT5G45890,AT5G46180,AT5G46230,AT5G46690,AT5G46790,AT5G47020,AT5G47150,AT5G47550,AT5G47810,AT5G48100,AT5G48310,AT5G48340,AT5G48570,AT5G48720,AT5G49070,AT5G49770,AT5G49900,AT5G50360,AT5G50400,AT5G50750,AT5G50770,AT5G51190,AT5G51210,AT5G51490,AT5G52500,AT5G52830,AT5G52900,AT5G53970,AT5G54250,AT5G54400,AT5G54470,AT5G54740,AT5G55370,AT5G55520,AT5G55860,AT5G55950,AT5G55970,AT5G56080,AT5G56100,AT5G56220,AT5G56880,AT5G56920,AT5G57260,AT5G57420,AT5G57500,AT5G57530,AT5G57920,AT5G58630,AT5G59040,AT5G59170,AT5G59220,AT5G59510,AT5G59550,AT5G59845,AT5G60470,AT5G60510,AT5G61130,AT5G61520,AT5G61600,AT5G62020,AT5G62150,AT5G62500,AT5G62520,AT5G62550,AT5G63700,AT5G64800,AT5G65040,AT5G65510,AT5G65590,AT5G65830,AT5G66150,AT5G66280,AT5G66400,AT5G66610,AT5G66780,AT5G66980,AT5G66985,AT5G67260,AT5G67360 TIWARI_4X2_BOTH-PLATFORM_UP Up-4x2-List of genes that are upregulated or downregulated in both the platforms. (Table S3 PubmedID:20406451) AT1G01900,AT1G02000,AT1G02060,AT1G02590,AT1G03950,AT1G05010,AT1G05610,AT1G07050,AT1G08900,AT1G08980,AT1G09155,AT1G09900,AT1G10050,AT1G11190,AT1G11210,AT1G11450,AT1G11530,AT1G12010,AT1G13080,AT1G13700,AT1G14360,AT1G14890,AT1G15100,AT1G15380,AT1G19850,AT1G19900,AT1G20490,AT1G21920,AT1G22180,AT1G23010,AT1G23120,AT1G23205,AT1G25230,AT1G26800,AT1G26820,AT1G28130,AT1G28170,AT1G33590,AT1G36060,AT1G36180,AT1G46768,AT1G47610,AT1G47960,AT1G48260,AT1G52700,AT1G52800,AT1G52810,AT1G52890,AT1G54040,AT1G55760,AT1G56280,AT1G58110,AT1G59660,AT1G64130,AT1G65500,AT1G69490,AT1G69600,AT1G69870,AT1G70670,AT1G70680,AT1G71691,AT1G71910,AT1G72910,AT1G73220,AT1G75620,AT1G75880,AT1G78390,AT1G78450,AT1G78460,AT1G78995,AT1G80160,AT1G80170,AT1G80180,AT1G80440,AT2G01060,AT2G01090,AT2G01660,AT2G01670,AT2G02580,AT2G03980,AT2G05380,AT2G05540,AT2G05910,AT2G18050,AT2G19590,AT2G21560,AT2G21820,AT2G22980,AT2G24260,AT2G26170,AT2G29350,AT2G32790,AT2G34840,AT2G35820,AT2G36710,AT2G36970,AT2G37130,AT2G37710,AT2G37750,AT2G38120,AT2G39140,AT2G39210,AT2G39400,AT2G39710,AT2G39980,AT2G40370,AT2G41340,AT2G42270,AT2G42890,AT2G43510,AT2G43820,AT2G45210,AT2G46070,AT2G46690,AT2G47670,AT2G48020,AT3G01210,AT3G01420,AT3G01570,AT3G01970,AT3G03470,AT3G03870,AT3G04520,AT3G04720,AT3G04910,AT3G08670,AT3G10450,AT3G10740,AT3G10910,AT3G11180,AT3G11340,AT3G11660,AT3G11930,AT3G13672,AT3G14210,AT3G14280,AT3G14520,AT3G14750,AT3G14760,AT3G14780,AT3G15110,AT3G15510,AT3G15720,AT3G16520,AT3G17510,AT3G17790,AT3G18830,AT3G19660,AT3G20810,AT3G21420,AT3G21550,AT3G21690,AT3G22940,AT3G26210,AT3G26220,AT3G26790,AT3G30720,AT3G50440,AT3G50620,AT3G50980,AT3G50990,AT3G51300,AT3G52480,AT3G52540,AT3G52970,AT3G61060,AT3G61490,AT3G62040,AT3G62650,AT3G63210,AT4G00670,AT4G01610,AT4G01680,AT4G04180,AT4G04460,AT4G08580,AT4G10955,AT4G10960,AT4G11410,AT4G11830,AT4G12280,AT4G12290,AT4G12300,AT4G13345,AT4G14270,AT4G15380,AT4G15420,AT4G16740,AT4G17220,AT4G17695,AT4G18550,AT4G18980,AT4G19120,AT4G19430,AT4G20270,AT4G21590,AT4G22200,AT4G22690,AT4G22710,AT4G22790,AT4G23050,AT4G23400,AT4G23670,AT4G23680,AT4G26220,AT4G27250,AT4G27450,AT4G28030,AT4G28040,AT4G28240,AT4G29720,AT4G29735,AT4G30960,AT4G31500,AT4G32180,AT4G32340,AT4G32650,AT4G32980,AT4G33810,AT4G34520,AT4G34630,AT4G35770,AT4G36520,AT4G36740,AT4G37010,AT4G37150,AT4G38550,AT5G01870,AT5G03200,AT5G03670,AT5G05110,AT5G05250,AT5G05340,AT5G07500,AT5G09440,AT5G09530,AT5G10770,AT5G10800,AT5G13840,AT5G15180,AT5G17700,AT5G17760,AT5G17870,AT5G18120,AT5G20580,AT5G20790,AT5G22310,AT5G23660,AT5G24530,AT5G25840,AT5G27010,AT5G27410,AT5G28020,AT5G28030,AT5G36220,AT5G36910,AT5G37290,AT5G37730,AT5G37850,AT5G39100,AT5G39520,AT5G39890,AT5G41400,AT5G41660,AT5G43810,AT5G43830,AT5G44380,AT5G45040,AT5G45160,AT5G45840,AT5G46300,AT5G46780,AT5G47160,AT5G47670,AT5G48290,AT5G48950,AT5G49190,AT5G49630,AT5G50750,AT5G55620,AT5G56370,AT5G56380,AT5G57520,AT5G57530,AT5G57660,AT5G57785,AT5G58570,AT5G59305,AT5G59845,AT5G60660,AT5G61370,AT5G62150,AT5G62360,AT5G63180,AT5G63590,AT5G63970,AT5G64050,AT5G64330,AT5G66040,AT5G66170 TIWARI_4X2_BOTH-PLATFORM_DN Down-4x2-List of genes that are upregulated or downregulated in both the platforms. (Table S3 PubmedID:20406451) AT1G01480,AT1G01530,AT1G01600,AT1G02050,AT1G02070,AT1G02820,AT1G02980,AT1G03430,AT1G03550,AT1G04020,AT1G04250,AT1G04380,AT1G04645,AT1G06640,AT1G06690,AT1G09200,AT1G10110,AT1G10380,AT1G11590,AT1G11850,AT1G12320,AT1G12330,AT1G12350,AT1G12710,AT1G13600,AT1G13650,AT1G14280,AT1G14580,AT1G14770,AT1G15550,AT1G16080,AT1G17170,AT1G17180,AT1G17260,AT1G18060,AT1G19830,AT1G22590,AT1G23410,AT1G26840,AT1G29450,AT1G30690,AT1G32170,AT1G34245,AT1G35140,AT1G35310,AT1G44900,AT1G47210,AT1G48010,AT1G50040,AT1G50630,AT1G52400,AT1G52470,AT1G52830,AT1G54050,AT1G54740,AT1G56540,AT1G61667,AT1G62480,AT1G62660,AT1G64220,AT1G64670,AT1G65390,AT1G65450,AT1G65470,AT1G66180,AT1G67330,AT1G67870,AT1G70950,AT1G72240,AT1G72250,AT1G72260,AT1G72970,AT1G73010,AT1G75250,AT1G75590,AT1G75960,AT1G77080,AT1G77640,AT2G01300,AT2G01400,AT2G01420,AT2G02000,AT2G02010,AT2G02400,AT2G02850,AT2G03190,AT2G03280,AT2G03350,AT2G04039,AT2G04790,AT2G05920,AT2G07727,AT2G13810,AT2G16440,AT2G17230,AT2G17720,AT2G19880,AT2G21420,AT2G21590,AT2G23120,AT2G23130,AT2G23170,AT2G23290,AT2G23810,AT2G25060,AT2G26150,AT2G28780,AT2G28900,AT2G30810,AT2G32140,AT2G32370,AT2G32800,AT2G33570,AT2G33590,AT2G33850,AT2G34190,AT2G34210,AT2G36870,AT2G37050,AT2G37060,AT2G37540,AT2G37560,AT2G38540,AT2G39640,AT2G39650,AT2G39690,AT2G39850,AT2G40540,AT2G40760,AT2G40955,AT2G41640,AT2G41650,AT2G42200,AT2G42530,AT2G42540,AT2G43530,AT2G43535,AT2G44190,AT2G44840,AT2G45900,AT2G47440,AT2G47520,AT3G01550,AT3G03480,AT3G04280,AT3G05310,AT3G05460,AT3G05740,AT3G06070,AT3G06100,AT3G07040,AT3G07390,AT3G07950,AT3G08770,AT3G09380,AT3G09390,AT3G11120,AT3G12110,AT3G12170,AT3G12955,AT3G13520,AT3G13730,AT3G15540,AT3G15990,AT3G16150,AT3G16220,AT3G17600,AT3G18610,AT3G18880,AT3G19680,AT3G20280,AT3G20520,AT3G21250,AT3G22840,AT3G24510,AT3G28980,AT3G29370,AT3G42660,AT3G43430,AT3G44735,AT3G48360,AT3G48490,AT3G48580,AT3G49270,AT3G50060,AT3G50660,AT3G54340,AT3G54560,AT3G56290,AT3G57160,AT3G57270,AT3G57680,AT3G59790,AT3G59845,AT3G62460,AT3G62790,AT4G03070,AT4G03400,AT4G04190,AT4G08040,AT4G08685,AT4G08870,AT4G09420,AT4G11050,AT4G11130,AT4G11280,AT4G11780,AT4G11900,AT4G12010,AT4G13580,AT4G13950,AT4G14060,AT4G14385,AT4G14615,AT4G14660,AT4G14700,AT4G15096,AT4G15190,AT4G15680,AT4G16730,AT4G16845,AT4G16850,AT4G16990,AT4G18250,AT4G18280,AT4G20480,AT4G22330,AT4G24130,AT4G24340,AT4G24350,AT4G24380,AT4G25830,AT4G26830,AT4G27280,AT4G27654,AT4G27890,AT4G27980,AT4G28310,AT4G29700,AT4G30020,AT4G30750,AT4G32170,AT4G32230,AT4G32240,AT4G34760,AT4G35725,AT4G35985,AT4G37310,AT4G37320,AT4G37410,AT4G39510,AT4G39650,AT5G02190,AT5G02220,AT5G03390,AT5G04610,AT5G05030,AT5G05580,AT5G06720,AT5G07990,AT5G09370,AT5G12930,AT5G15020,AT5G16030,AT5G18840,AT5G19700,AT5G20250,AT5G21070,AT5G23530,AT5G24660,AT5G25620,AT5G27380,AT5G28750,AT5G33300,AT5G34940,AT5G35550,AT5G35960,AT5G37540,AT5G38130,AT5G38280,AT5G40150,AT5G40155,AT5G41950,AT5G42240,AT5G42250,AT5G42910,AT5G43700,AT5G44780,AT5G44820,AT5G45280,AT5G45670,AT5G45970,AT5G46950,AT5G48570,AT5G50400,AT5G51490,AT5G51750,AT5G52070,AT5G52250,AT5G52310,AT5G52680,AT5G52810,AT5G52900,AT5G52910,AT5G54190,AT5G54290,AT5G54380,AT5G54490,AT5G54970,AT5G55570,AT5G55590,AT5G56920,AT5G57560,AT5G58660,AT5G59690,AT5G60350,AT5G60490,AT5G61600,AT5G62165,AT5G63600,AT5G63810,AT5G64310,AT5G64870,AT5G65060,AT5G66530,AT5G67300 TIWARI_6X2_BOTH-PLATFORM_UP Up-6x2-List of genes that are upregulated or downregulated in both the platforms. (Table S3 PubmedID:20406451) AT1G18730,AT1G20180,AT1G79430,AT4G33050,AT5G66350,AT2G25510,AT5G38980,AT2G45210,AT5G54980,AT5G52320,AT1G80440,AT1G17950,AT3G14560,AT5G36220,AT2G38750,AT3G63210,AT1G66240,AT5G59750,AT4G28085,AT1G71040,AT1G35340,AT5G52780,AT3G27890,AT1G28100,AT2G35960,AT3G16500,AT5G27950,AT5G48930,AT5G65280,AT3G49260,AT1G72890,AT1G72900,AT5G67370,AT1G79660,AT2G43550,AT4G22570,AT5G53200,AT3G04030,AT3G61060,AT4G32340,AT3G43960,AT5G16010,AT1G52400,AT1G31750,AT1G21000,AT1G64720,AT5G46780,AT2G47030,AT4G19500,AT3G61220,AT5G17450,AT5G57785,AT1G55910,AT5G26340,AT1G76080,AT5G50800,AT3G10930,AT2G47910,AT2G21185,AT2G36970,AT1G55960,AT3G48185,AT4G17500,AT4G11410,AT2G43510,AT3G18830,AT5G36930,AT3G53620,AT5G13740,AT3G43190,AT1G62810,AT3G25760,AT5G58260,AT5G47610,AT1G23010,AT1G70810,AT4G19510,AT1G23205,AT5G53120,AT3G56620,AT1G10910,AT5G65870,AT1G77020,AT2G31945,AT2G34490,AT5G03610,AT1G72450,AT1G65980,AT4G10770,AT3G25180,AT2G23120,AT4G20110,AT1G56280,AT1G68670,AT4G19410,AT2G47710,AT3G25070,AT3G46130,AT4G14930,AT2G46690,AT5G58770,AT5G53450,AT5G67180,AT4G14410,AT2G24550,AT3G28740,AT3G47340,AT4G08950,AT4G08870,AT1G12845,AT2G03200,AT2G20500,AT2G38470,AT3G01670,AT5G06320,AT1G73410,AT2G20630,AT1G28570,AT5G50550,AT1G65490,AT5G24660,AT4G14020,AT1G31940,AT5G45380,AT1G07440,AT5G28020,AT1G66920,AT1G35420,AT5G58350,AT1G80920,AT1G67870,AT1G10585,AT1G28580,AT5G40170,AT5G62140,AT5G03200,AT4G27800,AT2G20550,AT1G72930,AT3G21420,AT4G16480,AT5G19580,AT5G20050,AT5G58580,AT1G76960,AT5G22500,AT1G09970,AT1G79410,AT1G23350,AT1G01360,AT2G03980,AT1G77120,AT1G15210,AT1G74880,AT2G29340,AT1G01070,AT1G12850,AT3G12750,AT1G11530,AT1G13080,AT3G47295,AT5G62680,AT3G44630,AT5G64700,AT1G52040,AT5G38510,AT2G39770,AT2G46340,AT5G17870,AT4G10120,AT1G67080,AT4G33040,AT5G03720,AT3G02690,AT2G31110,AT3G11930,AT5G45500,AT5G39880,AT2G22470,AT2G45170,AT5G54940,AT3G16400,AT4G33790,AT3G22970,AT5G01180,AT3G56710,AT4G19840,AT2G23460,AT5G06860,AT4G25390,AT4G11570,AT5G22630,AT2G41260,AT3G17790,AT1G01490,AT5G54095,AT2G05830,AT1G32160,AT5G25840,AT5G56370,AT5G48790,AT1G02790,AT2G31930,AT1G01720,AT5G23660,AT1G68660,AT2G40470,AT1G78670,AT4G01026,AT2G40460,AT1G01725,AT1G21730,AT4G24450,AT1G69440,AT2G27830,AT4G04630,AT3G45730,AT1G26800,AT1G44350,AT4G31850,AT1G60190,AT3G61210,AT1G28670,AT5G21170,AT3G26320,AT5G09530,AT3G15270,AT4G16670,AT5G42760,AT3G46530,AT3G07420,AT5G53580,AT4G00440,AT1G66230,AT1G76930,AT1G79520,AT3G01270,AT4G28400,AT1G28400,AT3G12090,AT5G01880,AT1G77080,AT4G18130,AT1G27380,AT1G04350,AT2G41610,AT3G16520,AT5G43810,AT3G03870,AT1G24735,AT2G40970,AT1G76520,AT2G05910,AT1G13090,AT2G47260,AT2G48020,AT1G78000,AT1G17170,AT2G27190,AT3G25170,AT3G50270,AT2G05310,AT4G00895,AT5G19530,AT1G27370,AT4G17840,AT1G05010,AT1G23760,AT1G23220,AT1G26560,AT1G63880,AT1G67865,AT1G62070,AT2G16740,AT1G78290,AT5G63020,AT4G14010,AT3G26070,AT3G14550,AT4G23670,AT1G75190,AT4G20820,AT3G55970,AT5G42680,AT4G09760,AT2G23450,AT2G37040,AT1G26820,AT5G67030,AT5G02290,AT3G19010,AT4G01700,AT1G30500,AT2G46270,AT2G40270,AT2G37750,AT5G06720,AT3G57690,AT3G15650,AT3G55040,AT2G29350,AT1G15100,AT1G68620,AT5G42250,AT4G21590,AT1G12400,AT5G44440,AT5G56380,AT4G10960,AT4G10955,AT2G15230,AT1G72510,AT2G31200,AT4G37610,AT2G41800,AT1G53885,AT1G27130,AT3G02730,AT4G20270,AT3G20250,AT4G00670,AT4G20480,AT3G21600,AT3G49120,AT3G27170,AT1G07640,AT5G65170,AT3G26290,AT3G23090,AT4G24010,AT1G70530,AT2G38090,AT5G40780,AT2G21370,AT3G02180,AT1G52410,AT5G43760,AT2G20950,AT1G32460,AT2G37900,AT3G04000,AT5G13330,AT5G01520,AT1G19960,AT1G70820,AT1G49470,AT2G34840,AT2G12280,AT2G03750,AT5G17330,AT3G56060,AT2G16365,AT1G31440,AT1G30160,AT1G11350,AT3G11340,AT4G36500,AT1G14890,AT5G57660,AT5G27350,AT1G76590,AT1G07650,AT3G21520,AT2G17430,AT5G64240,AT5G50680,AT5G50580,AT1G27030,AT2G32190,AT4G15420,AT5G11070,AT2G04795,AT4G08920,AT1G02475,AT3G22120,AT4G18980,AT3G22210,AT1G24340,AT5G49730,AT2G01090,AT3G28750,AT2G40200,AT1G73500,AT3G28950,AT1G05340,AT1G79270,AT4G10310,AT2G15050,AT2G42300,AT5G57060,AT1G44100,AT1G55850,AT5G59730,AT3G10450,AT2G37330,AT3G02150,AT2G22970,AT1G53160,AT2G33380,AT2G41480,AT2G24210,AT3G62820,AT1G33590,AT2G47040,AT5G58330,AT4G29220,AT1G32310,AT2G25000,AT1G59124,AT1G58807,AT1G01170,AT4G35770,AT1G35260,AT4G00870,AT4G23990,AT1G07120,AT5G19250,AT1G59660,AT1G54280,AT4G28040,AT5G09480,AT1G30040,AT1G31830,AT5G49450,AT1G03400,AT1G73040,AT4G21120,AT5G44870,AT5G49660,AT2G04039,AT3G28130,AT1G55560,AT2G45570,AT3G20230,AT1G52290,AT5G22510,AT1G28660,AT3G61160,AT2G02990,AT3G07850,AT2G29450,AT2G17540,AT1G13700,AT5G05690,AT5G04200,AT2G15310,AT1G08900,AT5G54160,AT4G33666,AT3G45680,AT1G27920,AT2G47050,AT2G44360,AT4G14030,AT5G07430,AT3G26740,AT5G57150,AT5G24160,AT1G19850,AT4G09680,AT4G36740,AT4G24350,AT2G38530,AT2G39210,AT3G19520,AT5G44520,AT4G03230,AT5G25120,AT2G48090,AT1G02850,AT3G53690,AT4G00050,AT4G28240,AT3G05390,AT2G01660,AT3G18290,AT5G65380,AT1G22630,AT3G62170,AT1G22160,AT4G29720,AT1G19570,AT2G40880,AT3G14280,AT2G23950,AT1G19330,AT2G20920,AT4G16860,AT3G30720,AT5G17860,AT1G45474,AT5G44390,AT3G13400,AT2G46310,AT2G24140,AT5G05750,AT1G75770,AT4G02280,AT1G22050,AT2G32290,AT1G19730,AT3G06330,AT1G31600,AT1G52870,AT1G52030,AT4G24340,AT5G48800,AT5G04180,AT1G73630,AT1G64370,AT1G24575,AT2G44130,AT5G01870,AT2G18280,AT4G08150,AT2G34690,AT1G21450,AT4G22270,AT3G01970,AT4G32150,AT4G14270,AT3G22240,AT2G14080,AT1G33060,AT1G70420,AT1G68740,AT4G26850,AT1G78460,AT1G14250,AT1G09390,AT4G36010,AT1G69490,AT1G77990,AT2G29730,AT1G60260,AT1G12880,AT2G39400,AT4G05070,AT3G52480,AT5G64260,AT3G62410,AT1G59590,AT5G48850,AT3G07820,AT1G70230,AT1G17745,AT3G17380,AT3G60140,AT3G15770,AT1G52700,AT1G61563,AT4G23400,AT1G19900,AT1G10770,AT5G18240,AT3G29390,AT5G04340,AT5G44380,AT3G16360,AT5G53830,AT3G50220,AT2G31940,AT1G23130,AT3G26280,AT2G29660,AT1G43640,AT1G03220,AT5G20935,AT3G14520,AT3G10120,AT2G15580,AT5G23060,AT4G02250,AT3G59140,AT4G19170,AT2G21560,AT1G19715,AT5G37300,AT2G24790,AT1G05760,AT1G31580,AT5G44410,AT2G22480,AT4G27860,AT5G45770,AT4G32170,AT4G37150,AT1G69450,AT4G23680,AT3G11280,AT5G57340,AT5G53050,AT1G74010,AT1G32100,AT1G05310,AT4G18050,AT2G32860,AT4G00880,AT4G37430,AT1G48000,AT5G04490,AT4G29050,AT1G33560,AT3G43270,AT5G18600,AT4G01450,AT4G31500,AT3G26470,AT1G70670,AT2G05380,AT5G54290,AT2G44180,AT1G19670,AT2G42270,AT4G02860,AT2G29090,AT2G43820,AT1G71692,AT4G13840,AT1G35910,AT5G07410,AT5G57420,AT4G19430,AT2G24040,AT2G17500,AT2G16430,AT1G29720,AT1G52820,AT1G54790,AT4G00780,AT2G22900,AT4G36040,AT1G59870,AT2G40370,AT5G59720,AT1G13230,AT5G41400,AT4G09350,AT5G58650,AT1G75880,AT5G39210,AT1G61310,AT1G61300,AT2G42750,AT5G63970,AT5G06850,AT2G31980,AT1G35310,AT4G18550,AT5G24800,AT1G53560,AT1G11190,AT1G65370,AT3G29670,AT5G26660,AT2G32240,AT2G43910,AT3G01240,AT3G16220,AT5G15630,AT5G59820,AT3G12520,AT2G37130,AT5G07690,AT2G30600,AT2G36080,AT5G54660,AT5G20900,AT5G61530,AT3G15720,AT5G04140,AT1G67860,AT3G45130,AT1G80170,AT3G25600,AT5G15310,AT2G18050,AT4G01440,AT5G65730,AT2G23840,AT3G03270,AT3G50770,AT2G01680,AT1G23050,AT5G17300,AT3G08860,AT1G13110,AT1G03550,AT1G71970,AT2G17240,AT2G44745,AT3G63010,AT5G23460,AT2G25790,AT3G26650,AT2G47010,AT1G60590,AT3G46600,AT1G78680,AT1G71340,AT5G67160,AT1G50480,AT4G28380,AT5G44790,AT1G75620,AT3G06420,AT1G28130,AT4G16950,AT5G24670,AT1G65450,AT2G01950,AT5G26220,AT2G21970,AT5G37600,AT5G03800,AT2G05540,AT3G58550,AT1G65445,AT5G66040,AT1G47960,AT4G34920,AT3G04520,AT1G15010,AT5G01750,AT1G72260,AT4G31140,AT1G48430,AT1G51460,AT5G20250,AT1G54290,AT2G43800,AT2G26170,AT1G31820,AT1G66760,AT2G47270,AT1G72180,AT5G04080,AT3G61080,AT1G23090,AT3G21250,AT1G19020,AT2G41380,AT1G32560,AT3G63050,AT2G39850,AT1G72200,AT5G22860,AT1G20120,AT2G47800,AT1G52890,AT5G50950,AT1G11590,AT1G10140,AT4G29890,AT1G80050,AT5G17700,AT1G06640,AT4G35010,AT1G16880,AT1G61660,AT5G50260,AT2G32720,AT1G54020,AT2G17260,AT3G53960,AT1G69170,AT5G21150,AT1G05770,AT1G46768,AT2G29320,AT1G70680,AT2G25450,AT4G03320,AT2G42760,AT1G16260,AT1G16950 TIWARI_6X2_BOTH-PLATFORM_DN Down-6x2-List of genes that are upregulated or downregulated in both the platforms. (Table S3 PubmedID:20406451) AT1G01370,AT1G02280,AT1G02670,AT1G02690,AT1G02730,AT1G02800,AT1G02870,AT1G02980,AT1G03440,AT1G03445,AT1G03457,AT1G03470,AT1G03860,AT1G03870,AT1G04020,AT1G04110,AT1G04380,AT1G04645,AT1G04660,AT1G05210,AT1G05620,AT1G06150,AT1G07370,AT1G07750,AT1G07790,AT1G07920,AT1G08420,AT1G08560,AT1G08650,AT1G08860,AT1G09155,AT1G09200,AT1G09210,AT1G09250,AT1G09420,AT1G09660,AT1G10030,AT1G10060,AT1G10110,AT1G10550,AT1G10780,AT1G11070,AT1G11950,AT1G12000,AT1G12080,AT1G12320,AT1G12330,AT1G12350,AT1G13170,AT1G13330,AT1G13730,AT1G14060,AT1G14580,AT1G14687,AT1G14810,AT1G14970,AT1G15200,AT1G15660,AT1G15870,AT1G15910,AT1G16300,AT1G16330,AT1G16410,AT1G16500,AT1G16780,AT1G17060,AT1G17560,AT1G18370,AT1G18520,AT1G18560,AT1G18850,AT1G19520,AT1G19525,AT1G19640,AT1G19950,AT1G20550,AT1G20690,AT1G20750,AT1G20930,AT1G21120,AT1G21230,AT1G21670,AT1G21750,AT1G21900,AT1G21970,AT1G22090,AT1G22110,AT1G22590,AT1G22990,AT1G23280,AT1G23410,AT1G24540,AT1G26210,AT1G26770,AT1G26840,AT1G26910,AT1G27090,AT1G27400,AT1G27460,AT1G28170,AT1G30690,AT1G30710,AT1G30840,AT1G30960,AT1G31180,AT1G31320,AT1G32190,AT1G33800,AT1G33940,AT1G34130,AT1G34245,AT1G34355,AT1G34430,AT1G34770,AT1G42470,AT1G43000,AT1G44900,AT1G45110,AT1G47210,AT1G47290,AT1G47840,AT1G47870,AT1G48580,AT1G48630,AT1G48910,AT1G48920,AT1G48930,AT1G49760,AT1G49800,AT1G49870,AT1G50110,AT1G50240,AT1G50290,AT1G51060,AT1G51090,AT1G51190,AT1G51380,AT1G51510,AT1G51960,AT1G52360,AT1G52570,AT1G52600,AT1G53070,AT1G53100,AT1G53520,AT1G53645,AT1G53840,AT1G56080,AT1G56110,AT1G56170,AT1G59540,AT1G59670,AT1G60985,AT1G61170,AT1G61570,AT1G61800,AT1G62480,AT1G62640,AT1G62900,AT1G62950,AT1G63000,AT1G63050,AT1G63100,AT1G63140,AT1G63210,AT1G63220,AT1G63600,AT1G64130,AT1G64220,AT1G65240,AT1G65300,AT1G65330,AT1G65470,AT1G66460,AT1G66620,AT1G67100,AT1G67430,AT1G67680,AT1G67810,AT1G67820,AT1G68290,AT1G68380,AT1G68510,AT1G69250,AT1G69770,AT1G69860,AT1G70430,AT1G70830,AT1G71690,AT1G71695,AT1G71770,AT1G71850,AT1G72250,AT1G72440,AT1G72580,AT1G72670,AT1G73360,AT1G73560,AT1G74270,AT1G74870,AT1G74960,AT1G75150,AT1G75250,AT1G75640,AT1G76160,AT1G76540,AT1G76550,AT1G76720,AT1G76790,AT1G76825,AT1G76880,AT1G76890,AT1G77510,AT1G77580,AT1G77590,AT1G77660,AT1G77720,AT1G77750,AT1G77780,AT1G77960,AT1G78060,AT1G78770,AT1G78780,AT1G79140,AT1G79440,AT1G79460,AT1G79840,AT1G79930,AT1G79950,AT1G80530,AT1G80720,AT2G01300,AT2G01880,AT2G02000,AT2G02010,AT2G02100,AT2G02350,AT2G02515,AT2G02810,AT2G03190,AT2G05920,AT2G06200,AT2G07690,AT2G07750,AT2G10940,AT2G15325,AT2G15430,AT2G15740,AT2G15790,AT2G16270,AT2G16440,AT2G16780,AT2G16890,AT2G17230,AT2G17360,AT2G17370,AT2G17750,AT2G18220,AT2G18450,AT2G18490,AT2G18740,AT2G19385,AT2G19760,AT2G21420,AT2G21590,AT2G22660,AT2G22840,AT2G23130,AT2G23170,AT2G23350,AT2G23550,AT2G23570,AT2G23750,AT2G24580,AT2G24590,AT2G24740,AT2G25060,AT2G25700,AT2G26050,AT2G26760,AT2G27120,AT2G27690,AT2G27710,AT2G28620,AT2G28650,AT2G28740,AT2G29370,AT2G29550,AT2G30050,AT2G30200,AT2G30470,AT2G30730,AT2G30810,AT2G31010,AT2G31410,AT2G31780,AT2G32370,AT2G32590,AT2G32990,AT2G34190,AT2G34210,AT2G34700,AT2G34880,AT2G35880,AT2G36870,AT2G37070,AT2G37620,AT2G37880,AT2G38185,AT2G38490,AT2G38700,AT2G38720,AT2G38810,AT2G39640,AT2G39690,AT2G39820,AT2G40040,AT2G40290,AT2G40540,AT2G40955,AT2G41190,AT2G41840,AT2G42110,AT2G42380,AT2G43870,AT2G44120,AT2G44190,AT2G44240,AT2G44250,AT2G44450,AT2G44470,AT2G44690,AT2G45430,AT2G45440,AT2G46950,AT2G47610,AT2G47650,AT2G47670,AT2G47770,AT3G01020,AT3G01290,AT3G01890,AT3G02080,AT3G02230,AT3G02530,AT3G02560,AT3G02630,AT3G02640,AT3G02760,AT3G02870,AT3G02875,AT3G03130,AT3G03410,AT3G03480,AT3G03920,AT3G03960,AT3G04280,AT3G04710,AT3G04920,AT3G05000,AT3G05020,AT3G05060,AT3G05130,AT3G05230,AT3G05460,AT3G05500,AT3G05560,AT3G05590,AT3G05740,AT3G06030,AT3G06070,AT3G06100,AT3G06730,AT3G07050,AT3G07110,AT3G07320,AT3G07390,AT3G08890,AT3G08900,AT3G09380,AT3G09630,AT3G10660,AT3G10780,AT3G11160,AT3G11400,AT3G11510,AT3G11520,AT3G11650,AT3G11700,AT3G11740,AT3G11820,AT3G11830,AT3G12020,AT3G12110,AT3G12510,AT3G12960,AT3G13020,AT3G13230,AT3G13235,AT3G13460,AT3G14205,AT3G14360,AT3G14740,AT3G14760,AT3G14890,AT3G15020,AT3G15560,AT3G16050,AT3G16150,AT3G17600,AT3G17680,AT3G17840,AT3G18070,AT3G18130,AT3G18190,AT3G18240,AT3G18600,AT3G18610,AT3G19130,AT3G19590,AT3G19660,AT3G19710,AT3G19820,AT3G20000,AT3G20030,AT3G20050,AT3G20330,AT3G20490,AT3G20560,AT3G20670,AT3G20950,AT3G21070,AT3G21170,AT3G21410,AT3G21560,AT3G21620,AT3G21770,AT3G22310,AT3G22330,AT3G22425,AT3G22660,AT3G22740,AT3G22910,AT3G23060,AT3G23620,AT3G23670,AT3G23740,AT3G23760,AT3G23830,AT3G23940,AT3G23990,AT3G24210,AT3G24220,AT3G24250,AT3G24495,AT3G24510,AT3G25100,AT3G25110,AT3G25280,AT3G25520,AT3G25860,AT3G25990,AT3G26590,AT3G26744,AT3G27120,AT3G27330,AT3G27550,AT3G27640,AT3G27785,AT3G28340,AT3G28860,AT3G28960,AT3G28980,AT3G29160,AT3G29570,AT3G43430,AT3G44050,AT3G44750,AT3G45000,AT3G45090,AT3G45260,AT3G45930,AT3G46030,AT3G46320,AT3G46500,AT3G46740,AT3G46770,AT3G46780,AT3G47370,AT3G47480,AT3G48360,AT3G48480,AT3G48580,AT3G48870,AT3G48950,AT3G49010,AT3G49240,AT3G49270,AT3G49300,AT3G49310,AT3G49380,AT3G49430,AT3G49770,AT3G50210,AT3G50860,AT3G50990,AT3G51010,AT3G51280,AT3G51290,AT3G51720,AT3G51740,AT3G51800,AT3G52110,AT3G52580,AT3G52870,AT3G52960,AT3G53320,AT3G53560,AT3G53740,AT3G53900,AT3G54130,AT3G54180,AT3G54320,AT3G54560,AT3G54630,AT3G54750,AT3G54950,AT3G54960,AT3G55060,AT3G55510,AT3G55660,AT3G55950,AT3G56070,AT3G56090,AT3G56100,AT3G56260,AT3G56330,AT3G56340,AT3G56520,AT3G57160,AT3G57270,AT3G57390,AT3G58540,AT3G58650,AT3G59650,AT3G59790,AT3G60210,AT3G60510,AT3G60700,AT3G60840,AT3G61610,AT3G61640,AT3G62110,AT3G62360,AT3G63170,AT3G63240,AT3G63300,AT3G63480,AT4G00100,AT4G00180,AT4G00370,AT4G01140,AT4G01500,AT4G01900,AT4G03100,AT4G03110,AT4G03270,AT4G04180,AT4G04955,AT4G05190,AT4G08040,AT4G08780,AT4G10220,AT4G10480,AT4G10750,AT4G10950,AT4G11080,AT4G11140,AT4G11780,AT4G12620,AT4G13580,AT4G14110,AT4G14560,AT4G14690,AT4G14700,AT4G15000,AT4G15096,AT4G15190,AT4G15440,AT4G15755,AT4G16155,AT4G16500,AT4G16563,AT4G16660,AT4G16770,AT4G16780,AT4G16980,AT4G17215,AT4G17520,AT4G17550,AT4G18100,AT4G18870,AT4G19230,AT4G19460,AT4G20020,AT4G20050,AT4G20980,AT4G21070,AT4G21140,AT4G21430,AT4G21690,AT4G22130,AT4G22250,AT4G22770,AT4G22870,AT4G22880,AT4G23370,AT4G23750,AT4G23800,AT4G24260,AT4G25340,AT4G25630,AT4G25730,AT4G26230,AT4G26320,AT4G26430,AT4G26470,AT4G26590,AT4G26600,AT4G26660,AT4G26870,AT4G27760,AT4G27890,AT4G28130,AT4G28210,AT4G28310,AT4G28365,AT4G28660,AT4G28950,AT4G29140,AT4G29285,AT4G29360,AT4G29550,AT4G30020,AT4G30090,AT4G30160,AT4G30500,AT4G30920,AT4G30930,AT4G31580,AT4G31840,AT4G31900,AT4G32230,AT4G32240,AT4G32390,AT4G32720,AT4G32830,AT4G32870,AT4G32950,AT4G33130,AT4G33330,AT4G34290,AT4G34760,AT4G34950,AT4G35070,AT4G35650,AT4G35725,AT4G35730,AT4G36020,AT4G36180,AT4G36420,AT4G36590,AT4G36640,AT4G37530,AT4G37950,AT4G38000,AT4G38370,AT4G38660,AT4G38770,AT4G39380,AT4G39500,AT4G39630,AT4G39650,AT4G39670,AT4G39860,AT5G01280,AT5G01340,AT5G01370,AT5G01770,AT5G02220,AT5G02450,AT5G02590,AT5G02820,AT5G03120,AT5G03870,AT5G04500,AT5G04530,AT5G05030,AT5G05180,AT5G05260,AT5G05460,AT5G05510,AT5G06150,AT5G07210,AT5G07260,AT5G07500,AT5G07590,AT5G07810,AT5G07880,AT5G08260,AT5G08450,AT5G09370,AT5G09510,AT5G09590,AT5G09730,AT5G10010,AT5G10160,AT5G10390,AT5G10430,AT5G10510,AT5G10580,AT5G11230,AT5G11420,AT5G11460,AT5G11510,AT5G11780,AT5G12930,AT5G12980,AT5G13490,AT5G13600,AT5G13840,AT5G14180,AT5G14230,AT5G14250,AT5G14450,AT5G14500,AT5G14520,AT5G14960,AT5G14980,AT5G15350,AT5G15490,AT5G15650,AT5G15810,AT5G16390,AT5G16750,AT5G16780,AT5G16930,AT5G17160,AT5G17540,AT5G18420,AT5G18700,AT5G18840,AT5G19510,AT5G19690,AT5G19700,AT5G19750,AT5G20290,AT5G20710,AT5G20950,AT5G22650,AT5G22790,AT5G22810,AT5G23020,AT5G23400,AT5G23420,AT5G23570,AT5G23650,AT5G24240,AT5G24260,AT5G24316,AT5G24410,AT5G24580,AT5G24630,AT5G24900,AT5G24910,AT5G25190,AT5G26790,AT5G26830,AT5G27000,AT5G27240,AT5G27330,AT5G27430,AT5G27640,AT5G27770,AT5G27850,AT5G27920,AT5G28640,AT5G32460,AT5G33290,AT5G33300,AT5G33320,AT5G34940,AT5G38110,AT5G38450,AT5G38690,AT5G39440,AT5G39560,AT5G39720,AT5G40030,AT5G40155,AT5G40260,AT5G40730,AT5G40770,AT5G40880,AT5G41220,AT5G41610,AT5G41670,AT5G42080,AT5G42860,AT5G42910,AT5G43780,AT5G43960,AT5G44010,AT5G44020,AT5G44610,AT5G44820,AT5G46280,AT5G46290,AT5G46570,AT5G46880,AT5G46950,AT5G47020,AT5G47150,AT5G47350,AT5G47400,AT5G48230,AT5G48290,AT5G48310,AT5G48720,AT5G48950,AT5G48970,AT5G49180,AT5G50480,AT5G50730,AT5G50750,AT5G50770,AT5G50790,AT5G51490,AT5G51550,AT5G51690,AT5G52070,AT5G52330,AT5G52500,AT5G52650,AT5G52910,AT5G52950,AT5G53070,AT5G53290,AT5G53800,AT5G54220,AT5G54260,AT5G54400,AT5G54850,AT5G54860,AT5G54930,AT5G54970,AT5G55520,AT5G55560,AT5G55570,AT5G55590,AT5G55920,AT5G55950,AT5G56150,AT5G56200,AT5G56500,AT5G56580,AT5G56920,AT5G57000,AT5G57780,AT5G57870,AT5G58230,AT5G58420,AT5G58500,AT5G58630,AT5G58660,AT5G59010,AT5G59050,AT5G59240,AT5G59845,AT5G59850,AT5G59870,AT5G59950,AT5G60150,AT5G60930,AT5G61020,AT5G61260,AT5G61430,AT5G61730,AT5G61880,AT5G61980,AT5G62180,AT5G62190,AT5G62410,AT5G62440,AT5G62480,AT5G62500,AT5G62550,AT5G63070,AT5G63740,AT5G64310,AT5G64330,AT5G64410,AT5G64510,AT5G64640,AT5G64670,AT5G64710,AT5G64900,AT5G65300,AT5G65370,AT5G65630,AT5G65710,AT5G65890,AT5G66150,AT5G66230,AT5G66330,AT5G66530,AT5G66540,AT5G66680,AT5G66750,AT5G66985,AT5G67360 KAUFMANN_DEX/DEX+CHX-TREATMENT_NOT-CHX_UP Up-genes were selected if they were detected as differentially expressed upon both the Dex and Dex+Chx treatments but not upon the Chx treatment (Table S5 PubmedID:20360106) AT1G78440,AT5G22430,AT1G01448,AT4G19430,AT3G09922,AT3G22570,AT4G37850,AT1G08165,AT3G44510,AT4G04830,AT1G68240,AT3G27930,AT3G25573,AT3G55710,AT3G46680,AT1G68780,AT1G47395,AT2G18150,AT5G17810,AT1G67100,AT3G05400,AT1G60110,AT5G01550,AT3G28470,AT4G10370,AT4G37409,AT3G08860,AT1G49900,AT1G69310,AT3G29633,AT4G17810,AT2G18300,AT5G25870,AT1G19620,AT2G39950,AT1G73510,AT5G10970,AT1G75450,AT5G38010,AT3G09380,AT5G08030,AT1G27870,AT1G62975,AT5G55690,AT3G25655,AT3G55970,AT3G04700,AT3G50590,AT1G51420,AT1G12570,AT3G33528,AT1G07450,AT1G06137,AT2G44770,AT1G58225,AT5G10400,AT3G53600,AT5G11240,AT1G35515,AT3G59220,AT1G04470,AT5G43290,AT2G47540,AT3G54520,AT4G35640,AT5G37640,AT4G39720,AT5G09710,AT1G02460,AT3G44290,AT3G44310,AT2G32550,AT5G41315,AT3G43930,AT1G04990,AT5G53390,AT3G48850,AT5G11260,AT3G11930,AT4G32950,AT1G34000,AT5G56030,AT2G11810,AT5G09280,AT4G28811,AT4G30430,AT5G51630,AT3G26700,AT3G16390,AT1G66600,AT4G01450,AT2G02310,AT5G17430,AT1G32350,AT5G56020,AT1G45010,AT1G45249,AT1G76470,AT4G25100,AT5G35580,AT1G24110,AT5G66780,AT2G05580,AT1G16225,AT3G06660,AT2G16720,AT4G10120,AT4G28530,AT5G11270,AT5G42080,AT5G47330,AT3G02500,AT5G65000,AT1G21540,AT2G41800,AT4G11050,AT5G64710,AT2G42885,AT5G55131,AT5G54060,AT5G56000,AT1G75890,AT2G42485,AT4G15980,AT5G40020,AT2G38823,AT4G01160,AT5G54150,AT3G09600,AT3G44150,AT1G19810,AT1G52085,AT3G43110,AT3G13940,AT3G05727,AT4G23550,AT4G14370,AT1G48380,AT1G78400,AT3G57020,AT3G54530,AT1G57750,AT3G28620,AT3G21890,AT3G28570,AT1G36622,AT1G22240,AT1G48700,AT3G22510,AT1G23110,AT4G18425,AT1G66110,AT2G20800,AT3G15340,AT4G26460,AT1G06210,AT1G76890,AT2G21640,AT1G50700,AT5G66150,AT1G77525,AT1G27570,AT3G44262,AT1G53625,AT1G17710,AT1G06135,AT2G46570,AT5G33441,AT2G03130,AT1G50630,AT5G05000,AT2G18610,AT5G54080,AT5G44730,AT5G61340,AT2G33260,AT1G66550,AT4G15765,AT5G51990,AT3G44160,AT1G04660,AT5G01070,AT5G11230,AT4G37800,AT3G51220,AT5G66220,AT5G58400,AT3G58150,AT5G59340,AT3G11260,AT4G14695,AT1G24320,AT5G59732,AT2G23270,AT2G25625,AT1G76210,AT3G55440,AT3G50180,AT5G40690,AT1G02310,AT5G24200,AT1G02335,AT1G59810,AT5G63720,AT1G42480,AT5G23060,AT1G06148,AT4G27410,AT3G30180,AT5G10410 KAUFMANN_DEX/DEX+CHX-TREATMENT_NOT-CHX_DN Down-genes were selected if they were detected as differentially expressed upon both the Dex and Dex+Chx treatments but not upon the Chx treatment (Table S5 PubmedID:20360106) AT3G21420,AT4G35180,AT1G30700,AT1G66140,AT1G09250,AT2G41170,AT3G53810,AT3G16530,AT5G22300,AT4G34530,AT1G29270,AT2G41820,AT5G18930,AT2G14560,AT4G18197,AT5G05430,AT5G55250,AT4G09530,AT1G22530,AT1G26210,AT2G28550,AT2G39200,AT1G25250,AT1G61800,AT1G73550,AT5G09805,AT3G18518,AT4G37650,AT3G63440,AT1G70940,AT1G10652,AT1G14600,AT2G16740,AT1G58340,AT1G68840,AT4G17245,AT1G14720,AT1G46480,AT4G18170,AT4G16960,AT1G12950,AT5G01810,AT5G49700,AT1G69520,AT4G16447,AT1G23950,AT1G67865,AT1G05330,AT1G50420,AT5G20250,AT2G24610,AT1G03170,AT1G25560,AT1G27660,AT5G15890,AT2G39705,AT5G57685,AT2G22330,AT2G48090,AT4G28000,AT5G59580,AT4G18340,AT4G34590,AT4G37390,AT2G35940,AT1G49200,AT4G29700,AT2G21490,AT3G45260,AT5G13790,AT1G02630,AT1G02065,AT4G34588,AT1G61820,AT1G24575,AT4G27140,AT3G09520,AT4G15680,AT1G70000,AT1G13100,AT4G16750,AT5G45340,AT4G25470,AT2G38310,AT5G67180,AT5G40040,AT5G23350,AT1G01420,AT5G54075,AT1G06830,AT5G11360,AT2G46950,AT2G15300,AT5G65140,AT4G36490,AT2G45180,AT5G04390,AT2G42890,AT1G72230,AT3G10470,AT2G01913,AT4G17660,AT4G18250,AT3G56620,AT2G15680,AT4G18205,AT3G05660,AT3G53280,AT3G52490,AT5G18240,AT5G43380,AT1G33720,AT3G06490,AT4G15236,AT5G46590,AT4G15460,AT4G03140,AT2G28810,AT1G23050,AT5G49660,AT3G25570,AT5G07475,AT3G25770,AT1G57990,AT5G50820,AT3G21690,AT4G12300,AT5G48175,AT2G13960,AT5G07440,AT1G66700,AT2G23760,AT4G16990,AT1G53080,AT5G58350,AT3G21810,AT1G77100,AT5G53880,AT5G44578,AT2G23620,AT2G18196,AT2G23680,AT1G62400,AT4G04630,AT5G07680,AT5G56840,AT4G37520,AT4G36970,AT1G13110,AT5G17980,AT4G37790,AT2G25200,AT2G43620,AT1G28080,AT4G27300,AT2G43140,AT1G31710,AT5G04010,AT1G69523,AT4G15920,AT5G46350,AT1G19610,AT1G60380,AT1G13680,AT2G26650,AT2G32370,AT3G50560,AT2G01660,AT5G57240,AT3G52450,AT1G26420,AT3G23320,AT1G28310,AT3G06020,AT5G61610,AT2G04795,AT1G18000,AT3G44250,AT1G08320,AT2G40330,AT4G39070,AT1G27020,AT2G34510,AT1G18010,AT5G15830,AT4G18960,AT5G05160,AT2G41870,AT5G62350,AT1G29050,AT1G26780,AT2G03500,AT3G23635,AT1G21140,AT2G47560,AT3G48360,AT1G69870,AT3G46086,AT3G12750,AT1G17990,AT3G26200,AT2G40460,AT1G68568,AT1G06360,AT2G31230,AT1G69572,AT4G21920,AT5G14070,AT1G18020,AT4G33800,AT2G06005,AT3G61210,AT1G61165,AT4G00920,AT1G80390,AT2G28120,AT4G27290,AT1G56600,AT1G26770,AT1G20080,AT3G23167,AT1G23390,AT1G05700,AT5G61590,AT1G73040,AT3G62090,AT5G35732,AT2G41280,AT5G07450,AT4G34131,AT1G25230,AT5G62680,AT1G13670,AT5G05440,AT1G50610,AT1G06160,AT4G31380,AT1G14760,AT3G52840,AT1G06800,AT1G68870,AT1G68620,AT4G15700,AT1G12200,AT1G51890,AT5G59590,AT1G68570,AT1G07620,AT5G48430,AT2G03030,AT3G27490,AT5G45880,AT3G11280,AT1G27670,AT1G64370,AT5G39860,AT1G71880,AT5G23360,AT5G57220,AT1G24530,AT1G02620,AT1G05550,AT4G11040,AT5G40990,AT3G20110,AT3G60290,AT1G53541,AT4G18210,AT4G21870,AT2G20880,AT5G28490,AT5G19260,AT3G52130,AT3G13290,AT3G03820,AT3G04510,AT1G17540,AT2G23600,AT5G16190,AT3G11680,AT5G57640,AT3G49620,AT3G20950,AT1G21360,AT1G10070,AT5G49690,AT3G19090,AT2G36985,AT3G61198,AT1G05300,AT5G18600,AT2G43820,AT3G63110,AT5G04490,AT2G27430,AT2G47880,AT4G15350,AT4G28800,AT3G62960,AT3G28770,AT5G03840,AT1G31490,AT4G39750,AT2G39320,AT1G65970,AT1G65385,AT2G32880,AT1G22400,AT2G09795 KAUFMANN_RE-RATIO_CHX/DEX+CHX-TREATMENT_UP Up-the Ratio-Split and Re-Ratio functions of Resolver 7.1 were used to computationally generate Chx vs. Dex+Chx comparisons, from which differentially expressed genes were selected with the same cutoffs indicated above. (Table S5 PubmedID:20360106) AT1G01448,AT4G16960,AT4G17810,AT5G17810,AT1G62510,AT4G04840,AT2G35738,AT1G21540,AT1G43040,AT5G02090,AT4G16620,AT4G10120,AT2G32550,AT3G57800,AT1G31580,AT5G52020,AT5G57720,AT1G68240,AT5G54060,AT1G59640,AT4G33020,AT4G22880,AT4G33770,AT5G17430,AT3G13310,AT5G40330,AT5G04090,AT3G28140,AT4G20800,AT2G22201,AT4G01245,AT3G11940,AT3G59550,AT1G34419,AT1G32970,AT1G44890,AT4G09130,AT4G28530,AT1G40089,AT1G63360,AT4G35690,AT5G48850,AT3G15670,AT4G29360,AT3G24510,AT1G01520,AT5G43180,AT5G17330,AT5G41090,AT2G30690,AT1G13410,AT3G27180,AT3G61360,AT4G39720,AT1G49930,AT5G27944,AT4G17850,AT2G16970,AT2G45280,AT5G07100,AT4G16840,AT4G26365,AT2G01830,AT2G44130,AT2G45023,AT4G38401,AT1G61060,AT2G46170,AT4G19730,AT1G66600,AT3G20380,AT2G24850,AT1G71770,AT3G52060,AT3G02510,AT1G28580,AT1G27380,AT3G24310,AT5G67090,AT3G59980,AT5G51630,AT5G40530,AT3G26320,AT5G59310,AT5G53390,AT1G16910,AT2G36170,AT5G17030,AT5G20640,AT4G35640,AT5G58595,AT3G48740,AT4G20000,AT2G11810,AT4G19670,AT5G21326,AT5G40380,AT4G37850,AT5G62490,AT2G29480,AT1G01590,AT2G26030,AT5G01240,AT5G34560,AT1G28327,AT5G07440,AT1G55380,AT4G00140,AT3G22940,AT4G36870,AT1G64430,AT1G03070,AT1G20590,AT5G05220,AT2G42485,AT1G68780,AT4G33070,AT3G55750,AT5G26890,AT3G26600,AT2G26865,AT3G26290,AT1G22710,AT5G51410,AT1G36180,AT5G65000,AT3G45140,AT2G23672,AT3G53600,AT4G04510,AT1G33102,AT2G27150,AT5G28931,AT4G08695,AT1G23950,AT5G04200,AT5G57820,AT4G30140,AT1G05205,AT2G03870,AT4G33790,AT3G04140,AT3G49050,AT5G45380,AT3G43200,AT5G39760,AT5G02100,AT2G22570,AT1G45010,AT2G39510,AT1G74220,AT3G13170,AT1G07200,AT4G23450,AT3G50120,AT1G01480,AT4G04900,AT2G36640,AT1G14770,AT4G08555,AT4G09587,AT4G21230,AT3G27770,AT5G56300,AT3G02100,AT3G27920,AT4G15415,AT1G69610,AT4G17280,AT1G64185,AT5G10970,AT3G49910,AT4G30670,AT4G29650,AT2G14070,AT2G21450,AT4G18630,AT5G05490,AT5G15310,AT5G23480,AT3G46360,AT5G10770,AT5G62780,AT5G44000,AT5G43290,AT3G13277,AT1G50700,AT2G38510,AT2G34655,AT2G42365,AT3G54340,AT2G20850,AT3G20080,AT3G29720,AT2G23050,AT5G17470,AT3G59970,AT1G68960,AT4G20970,AT3G04500,AT2G29710,AT1G79620,AT1G06920,AT4G12110,AT5G18870,AT5G07500,AT4G26730,AT5G64240,AT1G08170,AT2G36090,AT3G62620,AT1G60030,AT5G35210,AT5G57391,AT5G14210,AT5G22875,AT3G16175,AT3G06360,AT5G44730,AT5G62575,AT5G08315,AT3G61350,AT2G37440,AT4G26390,AT3G06450,AT4G23240,AT5G62430,AT4G39750,AT2G37830,AT5G10990,AT1G73325,AT3G46050,AT4G17680,AT1G34280,AT5G27890,AT5G14920,AT5G48350,AT5G43150,AT4G17980,AT3G62460,AT4G37730,AT5G63760,AT2G39740,AT2G36210,AT5G08391,AT1G11310,AT1G52880,AT3G50310,AT1G60110,AT3G25905,AT1G04660,AT3G22100,AT3G24650,AT5G54720,AT4G29690,AT5G08460,AT3G50750,AT2G41780,AT1G68800,AT4G40042,AT2G19150,AT5G41760,AT1G48270,AT5G04510,AT4G34910,AT3G57630,AT3G26700,AT1G36240,AT4G28811,AT2G02310,AT4G00390,AT2G12462,AT1G53801,AT1G66470,AT4G38060,AT2G17860,AT5G33370,AT5G03545,AT5G60640,AT2G16750,AT2G16790,AT5G01630,AT3G55710,AT5G06800,AT3G14600,AT1G01250,AT2G17570,AT3G51490,AT5G38240,AT3G62550,AT5G20630,AT4G39960,AT5G02720,AT3G23420,AT3G56260,AT4G37010,AT4G20440,AT1G29170,AT3G28740,AT3G55970,AT1G09490,AT1G75550,AT2G40475,AT3G52660,AT1G32049,AT1G73700,AT3G06550,AT1G06148,AT1G70870,AT4G32440,AT5G16360,AT5G19890,AT2G15530,AT2G15880,AT4G11380,AT1G59940,AT3G06778,AT3G11700,AT1G15320,AT3G13520,AT1G03700,AT2G24390,AT2G48060,AT3G10405,AT5G26300,AT5G61340,AT1G35780,AT2G45940,AT5G67580,AT4G26020,AT2G35740,AT5G65550,AT2G22200,AT1G05894,AT5G60020,AT4G39710,AT2G25530,AT4G22212,AT5G06265,AT3G22660,AT3G52530,AT1G47485,AT2G19440,AT5G60280,AT2G32490,AT1G66550,AT1G19373,AT4G30820,AT3G30725,AT2G34430,AT5G49480,AT5G50590,AT4G23550,AT4G38140,AT1G48610,AT3G15010,AT1G53710,AT3G60540,AT3G18779,AT1G31550,AT2G03480,AT4G32950,AT1G77870,AT1G22980,AT5G04830,AT3G49190,AT5G05740,AT2G26150,AT4G32785,AT2G23348,AT1G51420,AT1G15980,AT1G33270,AT1G44150,AT5G15240,AT5G57150,AT5G37500,AT3G54050,AT1G57750,AT2G41940,AT1G49220,AT2G46920,AT3G44400,AT1G60850,AT2G28970,AT1G44575,AT3G10210,AT5G43935,AT1G32320,AT3G51990,AT1G04550,AT3G15930,AT4G11900,AT1G21460,AT5G57380,AT3G48850,AT5G67540,AT4G08035,AT1G74010,AT1G73750,AT3G20470,AT4G05631,AT4G10270,AT1G62860,AT5G05390,AT5G61570,AT4G10150,AT2G19210,AT5G22430,AT1G68510,AT2G31210,AT1G49952,AT1G58160,AT1G04570,AT1G68940,AT4G01450,AT5G38610,AT4G02260,AT1G17180,AT5G39380,AT5G05250,AT5G42120,AT1G33470,AT5G11410,AT1G52700,AT1G77290,AT5G25890,AT1G12520,AT5G01790,AT1G05930,AT5G38380,AT1G22240,AT3G17240,AT3G11090,AT4G36830,AT4G19090,AT4G34440,AT1G23110,AT2G21830,AT1G14270,AT4G37925,AT3G50140,AT1G31900,AT5G42445,AT1G48150,AT2G38823,AT2G36010,AT1G74430,AT2G39420,AT4G19400,AT3G01390,AT5G06839,AT5G56620,AT3G21890,AT3G23730,AT2G31625,AT1G46840,AT1G48640,AT2G21640,AT1G70460,AT4G35470,AT3G15510,AT5G09570,AT2G45990,AT5G37450,AT5G41410,AT1G03180,AT5G51180,AT5G50915,AT1G64780,AT5G18210,AT1G77520,AT2G31100,AT1G44740,AT1G52890,AT2G25625,AT3G60318,AT5G18290,AT3G63220,AT1G01170,AT3G24100,AT5G59732,AT1G75890,AT1G70640,AT5G51600,AT5G44286,AT5G57050,AT5G39790,AT4G37430,AT4G39940,AT5G60440,AT4G34320,AT4G21450,AT5G22870,AT3G12981,AT5G07890,AT1G04980,AT5G05960,AT5G54250,AT2G16720,AT5G61780,AT4G27950,AT3G19663,AT4G27610,AT2G43610,AT5G37550,AT3G49820,AT5G01360,AT4G35030,AT1G27920,AT2G33850,AT5G45320,AT5G38260,AT5G11160,AT2G39730,AT4G20040,AT4G30430,AT3G43574,AT5G11590,AT4G25920,AT5G23170,AT4G27410,AT5G53050,AT3G48510,AT3G56290,AT3G21510,AT1G18280,AT2G16990,AT4G11470,AT3G18340,AT1G05490,AT3G22540,AT3G16590,AT2G44860,AT2G14475,AT1G68980,AT1G52270,AT4G00355,AT1G36060,AT3G55810,AT1G02335,AT5G06280,AT3G20370,AT3G18773,AT4G28405,AT2G37330,AT4G40050,AT3G12990,AT2G21230,AT1G77300,AT4G37483,AT2G33480,AT2G34410,AT1G75920,AT5G11920,AT3G22680,AT5G47670,AT4G38910,AT1G11190,AT1G78180,AT5G52800,AT1G04770,AT3G51030,AT3G56080,AT2G24340,AT1G11330,AT1G58807,AT5G61412,AT5G67210,AT3G30180,AT1G01580,AT2G34580,AT4G32780,AT2G37390,AT5G57790,AT3G58090,AT5G55090,AT1G58460,AT4G00310,AT1G28310,AT2G13610,AT3G06850,AT2G22650,AT5G02370,AT4G30180,AT3G06200,AT5G24318,AT1G69710,AT2G01910,AT3G26460,AT1G73050,AT3G12440,AT3G57640,AT2G32510,AT3G03010,AT5G15530,AT5G41900,AT3G06030,AT1G22590,AT5G44410,AT1G63480,AT4G01220,AT3G10150,AT5G55570,AT5G45640,AT3G20460,AT4G17550,AT4G12560,AT1G48300,AT2G47060,AT3G07550,AT2G13960,AT3G44757,AT4G31354,AT2G41000,AT2G01300,AT4G22070,AT3G47860,AT2G06200,AT1G72870,AT4G14090,AT2G07675,AT4G11950,AT5G61620,AT4G14130,AT3G14530,AT1G67750,AT1G67890,AT1G64280,AT5G24670,AT5G09490,AT3G09820,AT1G07720,AT3G57910,AT2G38760,AT3G42150,AT5G64460,AT5G52547,AT3G47295,AT5G20960,AT2G28650,AT5G57180,AT1G08310,AT5G62480,AT5G46230,AT1G24610,AT2G20980,AT3G18720,AT2G30410,AT1G02070,AT2G17150,AT3G07610,AT3G32920,AT2G31220,AT4G14830,AT1G80590,AT1G51090,AT5G55330,AT4G35410,AT4G01520,AT5G65740,AT2G01918,AT1G11545,AT5G51610,AT4G19560,AT1G08290,AT5G28020,AT3G19000,AT1G13450,AT5G24430 KAUFMANN_RE-RATIO_CHX/DEX+CHX-TREATMENT_DN Down-the Ratio-Split and Re-Ratio functions of Resolver 7.1 were used to computationally generate Chx vs. Dex+Chx comparisons, from which differentially expressed genes were selected with the same cutoffs indicated above. (Table S5 PubmedID:20360106) AT5G52882,AT2G27500,AT5G15830,AT1G70940,AT5G64905,AT1G70000,AT5G52830,AT5G66490,AT5G61730,AT3G20910,AT5G50810,AT5G16023,AT5G59540,AT4G00730,AT3G47570,AT4G37650,AT3G03660,AT4G01750,AT2G20619,AT3G61850,AT5G35770,AT2G28810,AT1G49130,AT5G47070,AT1G78290,AT5G41400,AT5G08480,AT1G30490,AT5G67180,AT5G61930,AT1G68390,AT3G15540,AT1G23050,AT3G51910,AT5G18130,AT5G65040,AT5G13330,AT1G68440,AT5G66440,AT5G49660,AT2G25340,AT5G48657,AT2G35350,AT3G27415,AT1G27660,AT3G52490,AT5G43380,AT2G16895,AT4G37770,AT1G17990,AT1G09812,AT5G22792,AT4G29110,AT1G03850,AT1G25560,AT1G66390,AT4G30935,AT5G17080,AT4G18960,AT1G64380,AT5G16330,AT4G16990,AT3G02940,AT1G43680,AT3G01080,AT5G57670,AT3G63350,AT1G59700,AT5G07580,AT2G29320,AT4G14610,AT1G08500,AT5G06865,AT4G36740,AT4G01360,AT1G09030,AT1G66910,AT3G53810,AT1G24260,AT3G09280,AT1G18150,AT2G14560,AT1G18860,AT4G37560,AT1G58245,AT3G20541,AT5G24100,AT5G38240,AT5G20250,AT3G59060,AT2G03020,AT2G28710,AT1G52695,AT1G56240,AT1G30040,AT2G40330,AT2G22190,AT4G14480,AT4G25390,AT3G21690,AT5G41315,AT1G22900,AT4G20990,AT2G13800,AT1G21000,AT5G01380,AT4G05350,AT3G17950,AT1G34540,AT2G15220,AT1G34310,AT2G38310,AT5G60770,AT5G19360,AT4G36070,AT5G04390,AT3G26147,AT3G19030,AT5G38210,AT2G01600,AT4G09600,AT4G15415,AT5G47910,AT3G14370,AT1G51790,AT5G35732,AT2G03410,AT3G42728,AT5G57710,AT5G65140,AT5G16200,AT5G46780,AT5G48175,AT2G32360,AT5G61420,AT5G58580,AT1G32110,AT1G44830,AT1G59810,AT5G66270,AT3G56400,AT5G57320,AT2G02800,AT2G37900,AT2G33385,AT4G22730,AT4G26930,AT5G25190,AT5G50720,AT1G66500,AT2G29150,AT1G43330,AT5G48430,AT5G02400,AT1G13400,AT4G29310,AT3G62100,AT1G07540,AT1G69545,AT2G23760,AT3G11773,AT5G44568,AT3G62150,AT5G50565,AT2G04780,AT4G35180,AT1G13370,AT1G25230,AT5G60270,AT3G44410,AT2G17210,AT4G25470,AT1G69572,AT5G57190,AT1G22370,AT2G38250,AT1G16980,AT2G10020,AT3G13900,AT2G28550,AT1G54760,AT2G41930,AT1G28450,AT1G68870,AT3G16030,AT4G32280,AT2G26650,AT4G00940,AT1G06250,AT1G04240,AT1G34580,AT2G20160,AT4G21680,AT2G19800,AT5G44190,AT3G44670,AT5G48560,AT1G13260,AT2G46130,AT2G36080,AT1G61800,AT5G58350,AT5G39020,AT5G17980,AT1G12890,AT4G14450,AT5G43290,AT5G16540,AT1G31390,AT3G56380,AT4G30350,AT1G18490,AT4G12840,AT4G08949,AT1G02065,AT3G01290,AT1G22470,AT1G32640,AT1G30757,AT3G11850,AT4G27300,AT5G10504,AT3G61620,AT3G04790,AT1G58410,AT5G10880,AT1G17540,AT1G02830,AT1G05340,AT1G32600,AT3G18955,AT1G69180,AT3G63440,AT3G53065,AT4G39070,AT1G71530,AT2G23680,AT1G29660,AT3G22830,AT3G21780,AT5G52720,AT5G06740,AT1G57630,AT1G61105,AT2G23321,AT1G29050,AT2G45403,AT2G03500,AT1G25250,AT3G50280,AT2G28305,AT1G24909,AT1G24530,AT1G67865,AT5G62680,AT3G21080,AT1G78710,AT5G13790,AT5G38400,AT1G76220,AT4G30320,AT5G39620,AT1G42700,AT2G13542,AT1G22400,AT2G34930,AT5G35066,AT4G18250,AT4G24290,AT4G06526,AT5G43000,AT1G07150,AT1G27020,AT3G44800,AT3G26200,AT3G02125,AT1G18020,AT5G46350,AT1G71890,AT3G04510,AT5G23360,AT5G42560,AT4G05018,AT2G35990,AT1G27670,AT4G05095,AT5G41030,AT2G28120,AT4G11170,AT5G04238,AT1G10070,AT5G13600,AT1G44120,AT2G32315,AT1G47495,AT4G28703,AT5G13360,AT3G29030,AT1G74450,AT4G31950,AT4G36970,AT5G56840,AT1G74140,AT3G11280,AT5G12090,AT5G57535,AT1G26780,AT1G77890,AT5G18860,AT1G16420,AT3G61198,AT1G69520,AT4G38070,AT1G04120,AT1G69870,AT5G56960,AT1G74080,AT2G31020,AT1G64160,AT5G26930,AT5G17390,AT1G27710,AT1G57990,AT2G23220,AT2G45840,AT4G25490,AT5G49290,AT2G27690,AT3G05660,AT1G66920,AT1G08320,AT1G24485,AT3G14431,AT3G45260,AT1G29480,AT3G29791,AT1G50610,AT2G34510,AT1G69740,AT1G59930,AT4G34000,AT2G38490,AT4G01950,AT2G05441,AT2G28820,AT3G02493,AT4G15350,AT4G23700,AT2G31360,AT4G02910,AT3G24330,AT5G24940,AT5G57240,AT3G20900,AT5G67450,AT1G18230,AT3G43430,AT1G19530,AT3G31051,AT1G13670,AT3G28770,AT3G46330,AT5G61590,AT1G51870,AT3G28650,AT1G58340,AT1G02620,AT2G21810,AT1G06160,AT5G27690,AT1G17680,AT5G59590,AT4G10603,AT5G16190,AT5G63952,AT1G20801,AT4G33710,AT1G54420,AT3G28630,AT5G46830,AT2G31230,AT1G56250,AT4G39020,AT1G71696,AT1G14760,AT1G12200,AT2G24080,AT2G43261,AT1G43140,AT2G23600,AT5G18430,AT5G03668,AT1G35350,AT1G11360,AT5G05440,AT1G11610,AT3G32180,AT5G37030,AT1G62840,AT5G12180,AT1G26770,AT5G12070,AT2G22805,AT4G27220,AT3G01470,AT5G42830,AT1G62870,AT1G36880,AT3G11010,AT5G10278,AT4G17660,AT5G59260,AT3G04060,AT5G53040,AT3G45580,AT5G53380,AT4G22090,AT2G46950,AT5G49300,AT1G58150,AT5G37220,AT4G22680,AT5G48280,AT3G48360,AT1G10800,AT4G25580,AT1G56600,AT2G27440,AT5G35932,AT5G05770,AT5G10420,AT1G19390,AT3G49620,AT5G13580,AT1G67810,AT2G18042,AT5G50750,AT2G19980,AT1G18790,AT3G60290,AT1G24650,AT1G71880,AT2G40050,AT3G03730,AT2G40220,AT2G15390,AT3G51810,AT1G25220,AT1G21360,AT3G55252,AT3G21830,AT5G59580,AT3G58910,AT3G56780,AT2G44110,AT1G49270,AT4G21870,AT5G09780,AT5G38310,AT2G09795,AT5G41490,AT3G06490,AT4G03470,AT1G63105,AT1G32170,AT1G49500,AT4G15700,AT3G59350,AT5G28490,AT4G13490,AT5G36900,AT4G27290,AT3G57740,AT5G04490,AT5G18600,AT1G68840,AT1G06830,AT3G60720,AT3G01190,AT3G18900,AT3G61120,AT5G05070,AT1G67900,AT5G04180,AT4G37700,AT3G13680,AT4G06746,AT1G53870,AT2G23260,AT5G57220,AT1G57780,AT1G61270,AT2G09970,AT1G05080,AT2G32870,AT4G14410,AT2G23030,AT3G21410,AT4G25100,AT1G05136,AT2G38152,AT5G06570,AT3G02242,AT3G25930,AT4G35280,AT2G20030,AT3G27925,AT2G13760,AT5G15890,AT2G07440,AT1G65385,AT4G31380,AT3G62960,AT1G53080,AT5G03270,AT5G63560,AT3G44350,AT5G48860,AT4G15680,AT5G03840,AT3G50720,AT4G40085,AT2G06005,AT3G29033,AT4G18900,AT1G19968,AT3G30340,AT5G14070,AT4G34135,AT2G20350,AT2G44480,AT1G07160,AT2G15280,AT2G32487,AT1G19610,AT3G28220,AT2G13960,AT1G49060 KAUFMANN_DIRECT_CHX/DEX+CHX-HYBRIDIZATION_UP Up-differentially expressed genes were also identified from the direct Chx vs. Dex+Chx hybridizations (Table S5 PubmedID:20360106) AT1G01448,AT1G21540,AT3G54340,AT2G34430,AT3G17611,AT5G57250,AT5G22430,AT3G26700,AT2G44130,AT1G78440,AT5G36910,AT1G27461,AT2G20670,AT5G56870,AT5G19190,AT3G02150,AT2G18328,AT1G69310,AT2G35070 KAUFMANN_DIRECT_CHX/DEX+CHX-HYBRIDIZATION_DN Down-differentially expressed genes were also identified from the direct Chx vs. Dex+Chx hybridizations (Table S5 PubmedID:20360106) AT4G15210,AT5G35770,AT1G02065,AT2G12557,AT1G66140,AT5G53420,AT1G30490,AT1G69870,AT1G28670,AT1G66350,AT5G13180,AT5G46790,AT2G28120,AT1G28640,AT1G09812,AT5G11950,AT5G17980,AT1G30080,AT5G08350,AT5G49660,AT5G52860,AT1G14720,AT1G25250,AT4G36970,AT1G58340,AT5G05160,AT1G26780,AT5G37600,AT5G23360,AT5G47060,AT1G18710,AT5G38120,AT4G21870,AT4G35900,AT5G16530,AT5G16190,AT1G14760,AT2G28550,AT1G26770,AT3G04510,AT4G16750,AT5G28490,AT3G11680,AT5G03840 JUENGER_QPCR-STUDY_STRESS-GENE_DIFF DIFF_Results of QPCR studies of candidate stress genes in soil-drying experiments including response predicted a priori from literature, P-values from factorial anova, and correspondence with results form our array studies. (Table 2 PubmedID:20302603) AT2G38400,AT1G09500,AT1G15410,AT1G62570,AT2G43570,AT2G41190,AT2G22500,ATIG49450,AT3G11410,AT4026080,AT1G27200,AT2G46680,AT3G61890,AT4G27410,AT2G18050,AT5G51990,AT4G25480,AT4G25490,AT5G05410,AT1G01470,AT5G06760,AT5G66400,AT5G52310,AT1G20440,AT1G05340,AT2G17840,AT2G47770,AT2G40000,AT1G72610,AT2G06850,AT5G20630 JUENGER_KAS-1/TSU-1_DROUGHT_DIFF Diff-Excel file containing genes identified as differentially expressed at a FDR of 5% either constitutively between Kas-1 and Tsu-1 response to the drought treatment . (Table S3 PubmedID:20302603) AT2G42530,AT2G24210,AT4G01120,AT4G25100,AT5G17310,AT3G45140,AT3G48350,AT1G06640,AT4G35090,AT5G59310,AT5G20410,AT4G33550,AT1G52740,AT3G53980,AT5G03140,AT3G16670,AT3G16360,AT1G10020,AT2G37240,AT4G34110,AT1G17870,AT1G13930,AT5G58560,AT1G02840,AT3G12050,AT4G31870,AT3G16470,AT3G49160,AT2G18730,AT2G38400,AT3G44110,AT5G04280,AT1G62330,AT2G38040,AT1G30070,AT3G62700,AT5G07340,AT1G14350,AT3G42640,AT5G58110,AT4G23670,AT5G09890,AT1G61100,AT3G19680,AT3G02600,AT2G43620,AT2G04039,AT1G24170,AT4G29330,AT2G15970,AT2G37870,AT5G65990,AT5G56630,AT4G24700,AT2G17230,AT3G09980,AT3G53500,AT4G17730,AT3G56240,AT1G01110,AT4G32730,AT5G02180,AT5G53200,AT2G23110,AT3G12320,AT5G43460,AT4G31140,AT1G27385,AT1G52400,AT2G28900,AT5G43810,AT4G19430,AT3G02570,AT3G62040,AT2G13610,AT2G22900,AT1G79460,AT3G19620,AT1G73830,AT4G34000,AT3G10940,AT4G35240,AT5G09810,AT3G51910,AT4G39800,AT1G68470,AT1G24180,AT4G28480,AT5G53400,AT1G74320,AT2G22370,AT2G04650,AT1G14580,AT2G31380,AT5G65630,AT1G16700,AT1G79010,AT1G12120,AT4G36940,AT5G13740,AT3G02380,AT3G12560,AT1G57680,AT5G02500,AT1G71030,AT4G29130,AT1G65370,AT3G47010,AT5G39410,AT1G72500,AT5G05960,AT4G27000,AT3G01210,AT3G55370,AT5G44660,AT3G48990,AT4G03190,AT1G02500,AT4G14420,AT4G17150,AT4G17080,AT3G02580,AT3G11270,AT5G08060,AT3G16630,AT1G79440,AT5G45630,AT3G28220,AT4G37930,AT1G55920,AT1G23190,AT1G76170,AT4G09600,AT3G02780,AT2G46690,AT3G10190,AT1G17720,AT1G29270,AT1G79550,AT4G00895,AT1G70830,AT3G22710,AT4G23490,AT1G51590,AT1G20330,AT2G21870,AT3G46830,AT5G53140,AT3G45160,AT2G41120,AT3G13720,AT5G66380,AT2G05890,AT5G11550,AT2G37975,AT2G16940,AT4G39070,AT4G35990,AT4G30650,AT3G57520,AT5G49830,AT5G46020,AT1G47400,AT4G04830,AT5G61510,AT1G01610,AT1G74670,AT5G13110,AT2G18890,AT2G39850,AT1G62740,AT3G19540,AT4G30490,AT1G53380,AT5G48490,AT1G54030,AT3G09350,AT1G55690,AT2G28305,AT1G17050,AT2G34770,AT1G48120,AT4G25480,AT5G40850,AT5G14370,AT5G55570,AT4G27030,AT5G17440,AT1G51950,AT3G47510,AT1G64500,AT5G20250,AT4G14020,AT1G01170,AT5G41460,AT1G77080,AT4G24490,AT3G45090,ATCG00420,AT5G14240,AT4G30460,AT1G27600,AT1G33640,AT1G34245,AT5G45540,AT3G52640,AT3G13440,AT5G13710,AT5G10550,AT4G23680,AT4G34138,AT4G32620,AT3G53400,AT1G62380,AT2G39810,AT1G18730,AT1G05500,AT1G10990,AT2G18290,AT4G32240,AT4G18280,AT5G60570,AT1G78150,AT3G22930,AT1G19870,AT3G19820,AT1G62980,AT3G11620,AT1G08510,AT1G30880,AT2G41620,AT5G23720,AT2G41330,AT4G01410,AT2G26300,AT3G48420,AT3G29320,AT5G17170,AT3G14510,AT5G19460,AT5G19470,AT2G17500,AT1G79830,AT4G25780,AT5G11720,AT1G48750,AT1G47960,AT4G39900,AT5G62220,AT5G43060,AT1G13260,AT1G58360,AT4G24190,AT1G68140,AT1G32490,AT5G39570,AT3G57070,AT1G20160,AT3G10030,AT1G57700,AT5G61780,AT3G29240,AT1G76710,AT4G34450,AT5G37780,AT1G09500,AT1G59650,AT5G14090,AT3G13620,AT5G61570,AT3G56110,AT1G28220,AT2G06925,AT4G30450,AT3G16660,AT4G23600,AT5G01020,AT4G21880,AT4G12110,AT1G08040,AT2G39330,AT5G61150,AT4G33010,AT1G27680,AT5G22620,AT1G65900,AT4G14560,AT2G18250,AT1G23740,AT1G19450,AT4G20070,AT3G04470,AT3G24770,AT2G39340,AT5G24930,AT4G26460,AT1G63220,AT4G32280,AT2G16890,AT3G18640,AT1G55350,AT5G58590,AT2G38010,AT4G24520,AT1G77760,AT3G04120,AT2G29630,AT4G21170,AT1G75310,AT4G24210,AT1G21065,AT1G79230,AT4G01070,AT4G25470,AT5G61670,AT4G35300,AT2G42960,AT3G03640,AT3G01670,AT3G56590,AT1G29150,AT3G07550,AT5G13300,AT1G47970,AT3G55460,AT2G38820,AT1G14900,ATCG00510,AT3G11750,AT5G42820,AT3G22990,AT2G15880,AT5G55010,AT5G51570,AT4G37650,AT3G55920,AT3G18280,AT5G16210,AT5G59320,AT3G23710,AT1G16640,AT2G45880,AT2G47440,AT1G14360,AT1G18060,AT5G57345,AT5G51770,ATCG01020,AT4G35550,AT5G06600,AT2G32580,AT1G08190,AT3G11700,AT5G51820,AT1G04540,AT2G21650,AT2G43200,AT5G20790,AT4G26250,AT1G02475,AT1G01710,AT3G02210,AT3G09540,AT5G50350,AT3G15610,AT2G22990,AT4G00670,AT1G12310,AT3G61160,AT5G60980,AT4G27840,AT1G04240,AT2G44130,AT5G57110,AT1G50500,AT3G61830,AT4G23730,AT2G41700,AT2G44610,AT5G18840,AT4G14750,ATCG00020,AT2G15790,AT4G02500,AT2G29090,AT3G20870,AT2G25910,AT3G50000 JUENGER_KAS-1/TSU-1_ACCESSION-SPECIFIC-DROUGHT_DIFF Diff-Excel file containing genes identified as differentially expressed at a FDR of 5% either constitutively between Kas-1 and Tsu-1 exhibiting accession specific responses to the drought treatment (Table S3 PubmedID:20302603) AT3G27640,AT1G53035,AT5G48960,AT5G64330,AT5G15840,AT5G27950,AT5G27670,AT1G78410,AT3G23230,AT4G29130,AT2G47200,AT4G30650,AT1G20090,AT4G13250,AT3G47590,AT5G43710,AT1G15370,AT1G71070,AT5G57220,AT1G80850,AT5G55290,AT1G51160,AT2G37430,AT3G55790,AT4G33550,AT5G56630,AT4G00670,AT2G39850,AT2G32030,AT4G29740,AT4G17090,AT3G50700,AT4G25710,AT1G26650,AT4G33520,AT2G24210,AT1G21120,AT1G28490,AT2G16600,AT4G05620,AT5G08120,AT1G13280,AT1G51610,AT1G73570,AT2G44310,AT3G11620,AT5G64640,AT1G09810,AT3G01290,AT2G20810,AT5G19460,AT5G19470,AT5G48540,AT1G14990,AT5G03390,AT1G55440,AT2G28630,AT3G52950,AT4G32930,AT4G01390,AT3G42950,AT1G71780,AT3G14130,AT3G14150,AT3G22970,AT5G41870,AT5G43430,AT2G28900,AT4G00950,AT5G37030,AT1G68400,AT1G30700,AT2G28550,AT1G55780,AT3G53810,AT5G26780,AT1G30630,AT1G70830,AT2G36410,AT3G13784,AT1G78995,AT5G57990,AT5G07010,AT2G22840,AT1G30040,AT1G12730,AT1G79460,AT1G07520,AT2G27750,AT1G52390,AT5G66930,AT4G24490,AT2G16760,AT5G50770,AT2G43350,AT4G14130,AT5G53810,AT5G66420,AT4G22750,AT1G28280,AT5G54640,AT5G07280,AT1G53070,AT3G32100,AT1G44085,AT5G43940,AT2G15760,AT4G14680,AT4G25280,AT3G50440,AT3G55450,AT3G02140,AT4G04770,AT2G39170,AT1G72790,AT4G04330,AT5G20700,AT1G20840,AT3G15010,AT2G37750,AT4G03060,AT1G65900,AT1G08250,AT3G22425,AT5G40850,AT1G36000,AT2G46530,AT1G33090,AT1G33100,AT3G07640,AT1G23380,AT5G52900,AT1G66890,AT4G17010,AT3G15410,AT5G11000,AT5G07960,AT5G61290,AT5G51460,AT2G46330,AT3G16360,AT1G23190,AT5G56500,AT4G32120,AT4G37290,AT1G36380,AT3G28710,AT3G28715,AT5G57330,AT5G35080,AT1G28710,AT1G72430,AT3G57700,AT1G73690,AT1G54580,AT1G54630,AT1G44800,AT1G01840,AT4G19530,AT3G29420,AT1G78680,AT1G79680,AT5G05440,AT4G33490,AT2G38310,AT1G24440,AT2G35750,AT3G62150,AT5G05090,AT4G29680,AT4G32300,AT2G42990,AT1G80400,AT3G20870,AT2G41820,AT3G05520,AT3G53730,AT5G23720,AT3G60390,AT1G20490,AT5G64770,AT5G57345,AT1G56440,AT5G62080,AT1G71692,AT1G56450,AT3G13410,AT5G65260,AT1G13740,AT1G70400,AT5G66350 JUENGER_CONSTITUTIVE-CANDIDATE-GENE_DIFF Diff-Excel file containing constitutive candidate genes of interest identified from TAIR annotation, literature searches, or author interests. (Table S4 PubmedID:20302603) AT5G67030,AT1G49720,AT2G46225,AT5G24310,AT5G13680,AT3G14440,AT4G19170,AT1G30100,AT3G02140,AT2G29090,AT5G66400,AT4G34138,AT2G31750,AT3G63210,AT2G23430,AT1G17550,AT4G25480,AT5G05410,AT3G11020,AT4G16750,AT4G25470,AT5G51990,AT3G26744,AT2G17820,AT1G27320,AT3G21510,AT3G29350,AT5G39340,AT3G16360,AT1G03430,AT4G22200,AT4G18020,AT5G60100,AT5G24470,AT4G00760,AT3G16857,AT4G31920,AT2G25180,AT4G16110,AT2G46700,AT3G49370,AT2G28210,AT5G01810,AT5G45820,AT5G57630,AT5G25110,AT5G10930,AT1G01140,AT4G04700,AT1G74740,AT4G38130,AT3G44750,AT5G22650,AT5G61060,AT3G44680,AT2G27840,AT1G79000,AT3G44530,AT1G54260,AT1G51060,AT1G54690,AT2G38810,AT3G20670,AT5G02560,AT5G27670,AT5G59870,AT3G54560,AT1G07790,AT2G28720,AT2G37470,AT3G09480,AT5G22880,AT5G10390,AT5G10980,AT5G65360,AT4G40040,AT1G64060,AT2G26300,AT1G37130,AT4G33950,AT1G14350,AT3G24140,AT5G46240,AT4G18290,AT1G01790,AT5G11800,AT1G31120,AT2G35060,AT3G02050,AT1G70300,AT1G15690,AT1G64200,AT4G23400,AT3G61430,AT5G60660,AT3G53420,AT4G00430,AT5G51070,AT2G41430,AT4G19120,AT1G30360,AT3G30775,AT2G17840,AT5G47230,AT3G20310,AT1G33170,AT4G00750,AT4G18030,AT1G78240,AT3G10200,AT4G39090,AT2G21620,AT5G25610,AT1G11960,AT4G04340,AT3G52590,AT2G44060,AT1G01470,AT5G56030,AT2G42540,AT1G20440,AT5G52310,AT1G56070,AT2G36530,AT5G24270,AT4G31720,AT1G73330,AT4G17490,AT4G17460,AT5G06710,AT3G60390,AT3G01470,AT3G61890,AT4G16780,AT4G24660,AT1G26960,AT3G50890,AT1G75240,AT5G65310,AT3G46130,AT2G47460,AT5G61420,AT1G22640,AT2G16720,AT5G07700,AT3G47600,AT4G21440,AT5G15310,AT1G06180,AT1G18710,AT4G09460,AT4G00480,AT3G19580,AT5G15840,AT2G06990,AT5G61380,AT4G20370,AT5G65060,AT4G35900,AT5G10140,AT3G04610,AT5G13480,AT1G22770,AT2G40080,AT4G15880,AT4G08920,AT1G04400,AT1G10940,AT3G29160,AT1G60940,AT5G66880,AT4G40010,AT3G50500 RICHTER_GNC-OX/COL-0II_UP Up-[GNC-OX] vs [Col-0II] (Table S2 PubmedID:20844019) MYB98,AT4G19330,AT4G21020,ATGA3OX3,AT1G07050,ATCSLG3,AT4G11540,AT4G29400,AT4G33390,AT2G09990,AT4G37480,AT1G48060,AT4G40000,AT5G22530,AT5G02860,AT1G43895,AT5G10880,AT5G25400,SnRK1.3,EMB506,AT5G40310,AT3G15280,AT5G42120,AT5G47340,AGL83,AT5G50250,AT2G05140,AT4G12500,AT5G59390,MAF4,AT5G17140,AT3G51890,AT1G36105,AT1G17545,ATPIPK11,AT1G62490,AT1G24650,AT1G78760,AT1G04470,AT1G66320,AT2G27410,ALAAT2,HO3,AT1G55650,AT1G77570,LCR80,AT1G51800,AT1G72540,AT5G63100,ATMPK11,AT1G15125,AT2G28220,COR15B,ATGLR2.2,DOGT1,AT2G38340,AT2G04720,FIS2,AT1G32140,AT2G03460,AT3G01270,AT1G52970,PGP12,AT3G06730,AOX1A,AT3G18680,AT3G21960,EMB2454,AT3G21040,ANAC061,AT3G46680,AT3G51190,AT3G52170,AT3G53820,ATWBC19,AT4G04110,AT2G47770,AT4G11890,AT3G19810,WAK3,AT4G23310,SGT1A,AT3G23320,ATSBT3.18,AT1G21950,AT4G29620,AT3G14900,FLA5,AT4G33860,MPL1,WRKY50,OSB2,AT4G08098,AT5G38160,AT5G50990,AT5G53680,AT5G55320,AT5G61610,ATGSTU9,AT5G63070,AGL68,AT1G47980,AT5G14860,AT1G43000,AT3G21520,AT5G19810,MLP168,AT1G17615,AT1G43940,AT1G64600,AT1G03390,ATPDR12,AT1G48940,AGL56,AT1G69860,AT1G18050,AT1G55440,AT1G62160,AT1G35410,AT1G73325,AT2G35460,AT2G30320,AT4G26600,AT2G20270,SDG21,AT2G31170,AT3G27860,AT2G38900,AT2G02650,AT1G07550,AT2G34290,AT3G03410,AT3G01830,AT3G10470,AT3G17500,AIG2,MYB121,AT1G12870,AT3G21370,AT1G34560,AT4G37690,PGA4,AT3G43250,AT3G44170,AT4G01265,AT1G24000,AT3G56350,AT3G57620,AT1G10890,AT4G05310,AT4G18280,AT5G45775,AT3G56180,AT3G44580,NDB3,AT2G02880,AT5G31884,ATS1,CRU3,AT4G37500,AT4G37670,ATOEP16-2,AT5G01300,ATDTX1,AT1G62780,ATFD4,AT5G17200,EMB1241,AT5G18880,AT5G25430,AT5G27120,AT1G72290,AT5G42340,CYP707A3,AT5G46660,AT5G48130,AT5G48700,AT1G29680,CYP715A1,AT2G23270,GAMT2,AT1G47800,AT5G61620,ATHVA22B,AT1G56060,AT5G64580,AT4G05620,ATBCB,AT1G67660,AT1G66650,AT1G19060,AT1G51240,AT1G51210,SYP124,AT1G67120,BGLU45,AT2G28420,AT1G68890,AT1G76290,AT1G72100,AGL94,AT1G32250,AT2G10450,ATGSTU3,AT2G05200,ATNUDT6,AT3G58890,AT2G34320,RNS1,SCPL7,AT3G21980,AT3G23770,ATRANGAP1,PGP18,AT3G21380,DREB2B,AT3G42830,XERO1,MEE40,ASK13,DUO1,AT1G05920,CBL5,AOP3,AT4G10200,HAK5,CRK5,OLEO1,AT1G27060,SCPL44,AT4G34440,LHT7,CLPB2,AT4G40020,AT4G16940,AT4G17660,AT4G36700,AT1G62690,DIF1,AT5G25440,AT5G39980,CML37,AT5G44910,AT5G46670,EMB1006,CYP81F2,AT5G16580,ATCNGC18,AT5G19640,AT1G51820,ANAC036,AT4G02790,CLV3,AT1G24250,AT1G03710,AT1G70220,WRKY40,AT1G30560,CYP89A6,HDG10,AT5G16790,PAP2,AT1G68040,AT1G66090,E12A11,AT1G17800,AT2G16890,CYP96A15,AT1G35380,AT2G25890,AT1G17610,AT1G64130,NDB4,AT2G03850,AT2G05660,AT2G30670,AT2G36690,CYP76C3,HEMA3,CAT5,AT2G30090,AT5G52750,AT2G23110,AT2G37730,AT2G34357,AT2G14570,CYP704A1,AT3G03400,AT4G17570,AT3G02060,AT3G06560,AT1G26350,AT3G16970,RPL12-B,AT3G29070,MS2,AT3G12000,AT3G42850,AT3G47190,TIP5;1,AT1G30922,AT3G50770,SCPL36,AT3G55980,AT3G61400,AT3G44830,WAK1,AT4G10850,AT1G12180,SNG2,AT4G09110,AT4G10510,AT4G09220,AT4G13880,AT5G35798,AT2G13350,AT4G21080,AT1G58420,AT4G25380,AT5G61720,AT1G48190,AT5G03620,PBS3,AT5G37200,AT5G39790,COBL10,PHT3,AT3G44805,AtMYB72,AT3G45755,AT1G50400,AT5G56080,AT1G43100,AT5G63900,CYP81G1,AT5G15110,AT1G56030,AT2G07505,AT1G66870,MAP1C,ATEXO70H3,AT1G50160,AT3G56780,AT1G23770,AT1G62530,AT1G61540,AT1G62220,AT3G53310,ATCHX2,AT1G11810,FUT9,AT1G52690,EDA25,AT1G33900,AT1G71250,AMY3,ATOCT1,THI2.1,AT1G35490,AT1G02210,AT2G30380,AT2G22160,AT2G33080,AT2G06960,ATGSTU4,FRK1,AT3G07850,AT4G02990,AT2G36200,AT2G38250,AT2G32140,ArRABA1h,NCED6,AT5G47700,AT1G78930,AT1G02590,AT3G46190,AT3G48830,AT3G49460,CP33,AT2G21040,AT3G18530,SIB1,EMB2369,AT4G05140,LOX3,AT1G80865,AT4G18330,AT4G18660,DYT1,AGL78,AT1G32430,AT1G21890,AT3G12545,AT4G15040,AT5G10760,AT5G18450,CID13,AT5G26880,AT1G55930,AT1G73600,AT2G02290,AT5G44940,ATERF-2,AT5G49310,ATHSD6,AT5G51420,AT2G43140,AT5G53810,AT5G54910,AT2G20720,AGL102,RLK1,HDA18,AT5G61890,AT2G16130,ATNRAMP4,AT5G16700,AT4G09875,AT5G09490,AT1G35290,AT2G05640,AT1G71520,AT3G24982,AT4G16630,AT5G16160,AT1G70200,AT1G80990,AT1G47280,AT1G14930,ANAC019,ALPHA-TIP,ATPP2-A5,AT1G47625,AT2G03130,SDH2-3,AT5G57890,CYP71B9,AT2G04440,ATPP2-A3,HSP70T-2,LAC2,AT2G41730,AT1G01400,AT3G09620,AT3G06980,AT3G25480,AT3G23120,BE1,AT3G19690,AT3G42340,AT3G44240,AT3G48850,AT3G53170,BG3,ATMPK10,AT3G27180,AT4G12490,AT4G08190,AT4G09130,CAM3,ATHSP23.6-MITO,ADF7,AT4G26370,AT4G28800,TIR,CYP81D8,AT4G17710,ATMPK14,AT5G01850,AT5G07480,AT5G13350,AT5G14460,AT5G18470,ANAC090,SQP1,AT5G33207,AT5G26920,AT5G37280,AT5G44950,AT5G45180,AT5G53240,AT5G51440,CYP71B10,AT1G64100,AT5G59640,AT5G61090,AT5G63730,AT1G28040,BHLH101,AT1G65250,AT1G47786,AT3G26614,AT5G02710,CPN60B,AT4G04650,AT1G24270,AT1G24140,AT1G66290,AT1G02830,AT1G15560,AT1G74990,AT1G28650,ATBOR4,AT1G51810,AT1G51080,AT2G19980,CTF2B,AT2G33430,AT2G22590,AT2G16120,AT2G05950,PDE319,AT5G48470,AT2G13130,AT2G25440,AT5G58680,AT3G09870,AT1G26410,AT3G27550,AT3G20590,AT1G35710,AT5G54420,AT1G02770,AT3G46410,AT3G46570,AT3G50170,SCPL39,AT3G53330,BGL2,AT1G21520,AT3G58450,AT3G63040,AT3G26110,TIC20-IV,AT4G05380,AT4G11470,AT4G11690,AT4G12270,AT5G17350,AMY1,AT4G26050,AT4G31230,ATPER1,AT3G09250,AT5G14700,AT5G22810,AT5G38250,AT5G41890,AT5G44310,AT1G66210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RALFL11,AT2G16310,AT2G40350,AT2G15250,AT2G10890,AT2G05340,AT2G06760,AT2G14796,AT2G04150,AT2G32310,AT2G04043,AT2G32350,AT2G29430,AT2G12610,AT2G04260,AT2G04066,AT2G04070,AT2G14990,AT2G10990,AT2G11600,AT2G10250,AT2G10405,AT2G03860,AT2G21740,AT2G06820,AT2G15030,AT2G06540,AT2G11690,AT2G29270,AT2G07200,AT2G37830,AT2G12420,AT2G19806,AT2G10080,AT2G12407,AT2G35710,AT2G14400,AT2G11290,AT2G14475,AT2G23470,AT2G07070,AT2G07080,AT2G05980,AT2G24370,AT2G03970,AT2G12490,AT2G10320,AT2G32650,AT2G34185,AT2G07795,AT2G31425,AT2G22805,SCRL18,AT2G03955,AT2G03936,LCR76,LCR60,AT2G03933,LCR82,AT2G03937,CYCJ18,AT2G19802,AT2G31005,AT2G20618,AT2G26865,AT2G22145,AT2G14378,AT2G13295,MIR159C,AT2G22955,AT2G05995,AT2G03972,ATWHY3,AT2G38195,AT2G23148,AT2G45412,AT2G46308,AT2G02026,AT2G24834,AT2G22241,AT2G26267,AT2G04864,AT2G22201,AT2G31271,AT2G22426,AT2G36053,AT2G29654,AT2G11778,AT2G15318,AT2G43386,AT2G40711,AT2G13463,AT2G13547,MIR836a,AT2G09994,AT2G20555,AT2G07042,AT2G14288,AT2G30766,AT2G43261,AT2G22942,AT2G31432,AT2G23808,AT2G15025,AT2G19796,AT2G07213,AT2G18917,AT2G32179,IAA13,AT3G22000,AT3G51690,AT3G31908,AT3G42924,AT3G42650,AT3G33197,AT3G29767,AT3G43622,AT3G30420,AT3G32360,AT3G31390,AT3G60565,AT3G45095,AT3G30187,AT3G30730,AT3G42245,AT3G30120,AT3G21933,AT3G05415,AT3G30122,AT3G44245,AT3G32275,AT3G42320,AT3G43158,AT3G50160,AT3G31810,AT3G42875,AT3G33084,AT3G44640,AT3G13840,AT3G46482,AT3G42280,AT3G14500,AT3G42182,AT3G44793,AT3G33163,AT3G33178,AT3G32120,AT3G09120,AT3G29762,AT3G46250,AT3G32445,CYP76C8P,AT3G30764,AT3G55860,AT3G30875,AT3G43573,AT3G27997,AT3G32023,AT3G18145,AT3G30817,AT3G28157,AT3G29634,AT3G30813,AT3G30805,AT3G30803,AT3G26805,AT3G30812,AT3G31993,AT3G33083,AT3G31356,AT3G32377,AT3G20705,ATEXPA19,AT3G42230,AT3G32966,AT3G42783,AT3G31906,AT3G11010,AT3G32250,AT3G30718,AT3G44093,AT3G14670,AT3G15935,AT3G25225,AT3G31350,AT3G19045,AT3G32095,AT3G24093,AT3G43833,AT3G51171,LCR48,LCR55,MIR167A,SCRL19,LCR53,LCR4,AT3G27831,LCR18,LCR41,AT3G10195,MIR157C,DVL15,SADHU7-2,RALFL21,AT3G45248,AT3G01327,AT3G01324,AT3G30385,AT3G01331,AT3G45252,AT3G06995,AT3G30386,AT3G45275,AT3G45285,AT3G18845,MIR169L,MIR169I,MIR393B,AT3G51075,AT3G44765,AT3G59778,AT3G60952,WRKY30,AT3G33528,AT3G55252,AT3G03828,AT3G55258,AT3G28899,AT3G04732,AT3G29195,AT3G05193,AT3G61827,AT3G32052,AT3G63233,AT3G43572,AT3G14431,AT3G30456,AT3G03341,AT3G30222,AT3G58877,AT3G21371,AT3G10974,AT3G61571,AT3G22723,AT3G10526,AT3G61678,AT3G16851,AT3G13686,AT3G15518,MIR843a,AT3G14025,AT3G27809,AT3G44757,AT3G26134,AT3G43432,AT3G44274,AT3G61111,AT3G13825,AT3G15534,AT3G22345,AT3G23633,AT3G51760,AT3G52680,AT4G08720,MAPKKK21,AT4G06623,AT4G08645,AT4G03810,AT4G05505,AT4G06646,AT4G03310,AT4G06748,AT4G21366,AT4G18410,AT4G03726,WRKY53,AT4G06568,AT4G06566,AT4G10230,AT4G03695,AT4G06556,AT4G08347,AT4G06498,AT4G07720,AT4G06481,AT4G06491,AT4G07696,AT4G20365,AT4G06529,AT4G03923,AT4G06619,AT4G06523,AT4G06617,AT4G05918,AT4G04316,AT4G04405,AT4G04100,AT4G07862,AT4G04255,AT4G20640,AT4G04145,AT4G18690,AT4G08096,AT4G02950,AT4G32230,AT4G32215,AT7SL-1,AT4G07934,AT4G08105,AT4G11900,AT4G16030,AT4G02400,AT4G11500,AT4G08030,AT4G08022,AT4G08078,AT4G01975,AT4G15820,AT4G10990,IRT1,PLS,AT4G03505,AT4G29658,AT4G08868,AT4G08867,AT4G16162,AT4G02733,SCRL21,LCR21,AT4G30072,LCR61,AT4G08875,AT4G08485,LCR2,AT4G00356,AT4G28420,RALFL29,MIR169G,MIR824a,AT4G36052,AT4G12917,AT4G03811,AT4G26288,AT4G09465,AT4G23205,AT4G09464,AT4G24974,AT4G36268,AT4G23103,AT4G30991,MIR841a,MIR850a,MIR826a,AT4G14358,AT4G25885,AT4G39404,AT4G23215,AT4G12617,AT4G14301,AT4G19512,AT4G03566,AT4G32342,AT4G00467,AT4G09012,AT4G00114,AT4G09584,AT4G35733,AT4G31196,AT4G13575,AT4G34332,AT5G35796,AT5G35800,AT5G30420,AT5G39170,AT5G28673,AT5G36737,AT5G30450,AT5G31989,AT5G54206,AT5G26582,AT5G26692,AT5G32654,AT5G34887,AT5G42505,AT5G33400,AT5G31821,AT5G31909,AT5G35602,AT5G26286,AT5G26642,AT5G35575,AT5G35608,AT5G25260,AT5G34852,AT5G32042,AT5G34862,AT5G30400,AT5G28065,AT5G27882,AT5G27895,AT5G27345,AT5G29720,AT5G30218,AT5G29337,AT5G38565,AT5G17100,AT5G51540,AT5G38620,AT5G28927,AT5G28773,AT5G38920,AT5G39070,AT5G34795,AT5G18633,AT5G34665,AT5G52055,AT5G34266,AT5G34082,AT5G28545,AT5G28497,AT5G28285,AT5G35076,AT5G32572,AT5G33258,AT5G38230,AT5G37270,AT5G42957,AT5G33250,AT5G32513,AT5G32460,AT5G52930,EMB175,AT5G35354,AT5G33395,AT5G32623,U2.7,GH3.4,AT5G35205,AT5G43035,AT5G35050,AT5G22791,AT5G37474,AT5G37473,AT5G50423,AT5G46873,AT5G44973,LCR58,AT5G16453,AT5G43285,MIR319,AT5G54215,AT5G45905,AT5G55410,AT5G36490,AT5G36480,AT5G58412,AT5G60978,AT5G44555,AT5G44495,AT5G42895,AT5G34828,AT5G34882,AT5G05025,MIR169B,AT5G42567,AT5G40348,AT5G35375,AT5G63195,AT5G44568,AT5G03668,AT5G01445,AT5G16235,AT5G56452,AT5G28824,AT5G63634,AT5G28931,AT5G65166,AT5G52901,AT5G43066,AT5G42504,AT5G50361,AT5G15008,AT5G16567,AT5G18748,AT5G17795,AT5G04238,AT5G03944,AT5G04853,MIR869a,AT5G11412,AT5G18037,AT5G01732,AT5G22794,AT5G03377,AT5G15546,AT5G08695,AT5G40275,AT5G26146,CPK28,CYP79C1,AT2G31080,AT3G60170,AT3G53560,AT3G60000,AT4G39040,ATEXPA25,AT4G14470,AT5G52090,AT3G42115,CYP707A3,AT4G16630,AtMYB45,AT4G23220,AT4G10850,AT3G59010,AT3G22750,AT5G45690,MRN,AT2G36780,AT2G21820,AT2G17240,AT1G56150,AT5G51190,LOX3,ATBCB,PEP,AT5G24530,AT3G49130,AT4G18440,AT3G49220,DREB2A,AT2G37870,WRKY46,WRKY40,AT5G13210,ATMRP8,AT4G26600,AT5G39785,AT5G24210,ANAC019,AT5G65580,AT2G16650,AT5G37750,WRKY50,AT4G36280,AT5G17350,CAB3,AT4G26020,AT5G09720,AT4G10140,AT3G58200,AT1G63540,AT1G61340,AT3G29375,AT2G33000,AT2G32550,AT2G32230,AT2G32220,AT1G49770,BE1,AT3G19230,AT2G24510,ASML2,AT2G21640,AT2G20835,AT2G20480,AT3G07860,AT2G14710,MUTE,AT1G30250,ATWHY3,AT1G23510,AT1G13470,AT1G12030,AT1G07550,GL1,AT4G09730,PDE312,CPZ,AT4G39795,AT5G36925,RAP2.9,AT2G40205,AT4G08093,AT4G14315,EMB506,CPN20,AT2G03580,ATPP2-B13,ATOPT5,AT1G60110,AT3G27970,AT3G62990,ATHB40,AT5G25990,ATUPS4,AT5G36001,AT1G30140,AT3G17200,AT3G29580,AT4G18540,AT3G03030,AT1G02965,AT1G29540,ANAC015,AT1G47660,AT1G61060,AT2G24810,AT3G09620,AT3G24540,AT3G25090,AT3G51020,AT4G07965,AT5G05050,AT5G24250,AT5G28560,AT1G13607,SCRL19,AT4G25845,AT3G23450,AT4G35610,AT3G22490,AT1G34110,PHE1,AT2G15345,AT3G43290,APUM7,AT5G26620,AT2G10560,AT2G21740,AT1G64600,AT5G57970,AT1G67950,LOX3,AT3G55980,AT4G19420,AT2G24420,AT4G10590,AT1G26380,AT3G04000,XRCC3,AT-TCP20,AT5G01990,WRKY38,AT4G15093,AT3G28670,AT5G52660,ATGH9B18,MYB55,AT1G19490,AT2G10900,AT4G25580,AT1G50110,AT3G23060,AT3G02200,AT3G14860,ATHSD1,AT2G17230,PFU1,AT5G44720,ATGOLS3,AT4G03290,AT3G58010,AT5G22070,ATELC,AT5G13310,AT5G01850,AT5G46140,AT2G15555,AT2G23880,AT4G01670,AT4G19060,AT1G61970,CESA8,AT2G19700,AT2G39690,AT1G28695,AT1G30850,AT3G23350,AT2G25410,AT2G16019,AT5G61200,AT3G31990,AT2G06840,AT2G14288,AT1G33450,AT2G14940,AT1G68700,EMB2454,AT5G54790,BRL3,AT3G10974,AT3G06433,AT3G01930,AT2G19360,AT5G01080,CDA1,AT5G27345,AT1G31790,AT3G15590,AT5G12380,AT1G35710,AT2G36980,AT2G29780,RFC3,AT4G21170,AT1G64630,AT3G43546,SDH2-1,ATGSTF7,CAB1,DRT112,NDC1,AT2G16895,LYC,MAT2,LHCA3,AT5G62360,CP29,LDL1,AT2G38590,AT2G32645,SCL13,SCL1,AT5G11580,AT2G14115,AT1G53030,AT2G29760,ATB' DELTA,AT5G18037,AT1G26799,AT2G41590,AT4G31355,CSD2,AGP11,AT3G28750,LTP3,AT3G52930,AT3G06730,CRA1,CRA1,AT2S3,AT2G05915,AT4G28080,AT4G28080,LOX2,LOX2,LOX2,AT2G44240,CPN60A,AT4G09040,OLEO2,LKR,GGPS2,ATBCB,ATBCB,WRKY53,DELTA-VPE,AT5G55070,CR88,CR88,SKS13,AT3G18680,AOX1A,AT5G62360,AT3G50930,AT1G27990,AT4G21210,CSD2,RPS2,EMB1990,38595,AT5G40570,AT5G40570,ATELC,CML37,AT1G78050,AT4G26370,cpHSC70-2,AT2G31840,AT1G72920,AT5G41740,AT3G54490,PLP2,AT5G19580,AT5G43450,AT1G68250,ATERF6,AT4G02790,AT4G08895,DOGT1,ATCSLG2,AT3G20930,AT3G28270,AT3G28270,AT1G01500,APO1,OSB3,ZIF1,DREB2A,AT2G16890,AT5G17460,AT5G50250,AT3G09830,ATCHX23,AT2G18670,AGL68,AGL68,AT2G30350,ALA1,AT1G67660,AT5G37130,MYB3R-3,ATPP2-B13,ATPP2-B13,AT5G25250,EMB2777,AT1G04945,AT5G48470,AT5G33300,AG,AT5G39790,AT1G07130,WRKY30,AT2G32160,AT3G51890,AT5G58680,UBP16,CRK6,AT5G16790,AT2G03420,GPT2,AT4G18900,AT5G38290,AT4G11890,AT4G11890,AT3G48650,AT3G13227,GNC,AT4G10850,BZO1,AT4G22280,AT5G18260,AT4G34830,AT1G27461,AT1G29630,AT4G23260,AT4G23260,IRT1,ATPUP6,AT5G43740,AT1G07645,AT3G48710,AT4G19515,AT2G31890,AT3G57760,AT4G29770,EMB25,AT3G44790,AT1G11765,BG3,AT5G67340,AT1G74130,AT5G37590,AT4G39470,AT2G44760,AT5G59490,AT5G44575,AT3G50950,AT5G15010,AT1G26150,AT2G10970,AT1G30680,AT1G30680,AT1G22830,AT1G30755,EMB1135,AT2G27650,AT5G10420,AT2G22710,AT2G25480,CYCD7,AT1G20310,AT1G52695,AT2G23900,AT3G25260,AT1G60640,AT2G40520,AT3G28820,AT5G07890,AT5G22470,AT4G19630,ATGA2OX3,AT1G11330,NUA,CYP79A3P,AT1G11330,AT2G07739,AT1G23280,AT2G47115,AT2G23880,AT4G16050,AT1G20500,AT4G36600,AT4G25270,COBL6,AT1G73860,AT5G57720,AT1G66730,AT4G29200,LOX3,AT5G07890,AT1G50750,AT2G39490,AT5G50990,AT3G28490,AT3G29000,AT4G38380,AT1G40109,AT1G62225,AT3G56330,ANAC044,AT4G11990,AT2G33320,AT4G19520,AT2G44470,AT2G32680,PTAC3,AT2G31150,AT4G14370,AT1G56145,NRPC1,AT4G19520,AT4G16807,AT1G62000,ATHSD6,MLO12,AT1G73130,ATPP2-B2,AT5G54360,ATCNGC9,AT2G22010,AT4G39580,AT5G61890,AT2G01130,GLIP6,AT5G28450,AT4G16970,AT5G61040,AT4G13390,MBD13,AT1G76720,AT2G43140,AT3G50040,AT1G49440,AT5G25955,AT5G01080,AT1G20860,AT1G65240,AT4G02490,AT1G01520,PWD,AT1G24145,AT1G24230,AT5G27010,AT3G53310,AT1G42350,AT3G49300,AT3G47100,AT4G05470,AT1G43680,AT1G43760,AT3G62990,AT3G43200,AT1G55980,AT1G48190,AT1G07500,AT1G48625,AT1G20680,AT5G52720,AT5G51195,AT1G22000,AT3G28157,AT3G25550,AT3G22690,AT3G30852,AT3G31950,GALT1,AT3G28350,AT5G59620,AT5G17090,AT4G03930,AT5G37590,AT5G44490,AT5G24690,EMB2744,AT5G38810,AT3G30120,AT5G54700,AT5G62080,AT1G47370,AT1G35030,AT5G24790,AT1G30680,AT1G07050,AT1G76530,CAL,AT3G03620,WRKY68,AT2G05020,AT2G16300,AT2G10650,AT2G13890,AT2G41400,AT2G29840,AT2G06980,AT2G26135,AT5G11360,AT4G16200,AT2G15610,AT2G07721,AT4G23160,AT4G18250,AT4G15810,AT4G15060,AT2G16890,CALS5,EMB1417,ATPDR2,AT4G14190,AT4G19240,AT3G21020,PDE312,AT2G16840,AT2G01100,AT5G62360,AT4G20970,AT1G59990,AT3G04650,SCPL51,AT5G40570,AT4G10660,AT5G10760,AT5G42050,AT1G43886,AT5G41750,CPN60B,LPR1,AT3G28580,AT4G26970,AT3G01345,AOX1A,AT3G44790,THI2.1,CSY2,AT5G35660,AT3G05660,AT1G02150,WRKY3,AT5G01300,GRP16,PDE319,HR4,AT5G49950,AT1G53800,AT4G09040,CR88,AT3G43510,NHL22,AT3G08947,AT1G76720,AT1G72900,ACT4,AT1G04660,AT3G14067,EMB1586,AT5G35980,ATBCB,ST,AT5G27610,AT1G20730,OLEO1,CPuORF49,AT3G52500,DCL2,AT5G25470,MPL1,AT1G67455,AT2G36820,CS26,AT3G60080,CR88,AT1G20680,AT3G28980,MYB89,AT4G03410,AT1G65365,AT1G54570,ALDH12A1,AT2G47770,AT1G30960,AT5G48470,AT1G31790,AT2G35140,EDA39,ADF4,AT2G44860,AT4G12735,AT3G54940,AT3G14380,AT2G21860,AT5G52760,AT5G11140,AT5G28510,AtMYB15,AT1G02540,AT1G06925,ATMRP15,AT2G45360,AT5G25410,AT5G03435,AT5G22520,AT3G09510,AT5G50510,AT4G09745,AT4G32110,AT1G45616,AT4G39040,AT2G15555,AT4G38020,AT3G46345,AT3G47410,AT1G68380,APRR3,AT5G45240,AT2G25480,AT3G43148,AT4G29780,AT5G52065,ATCHX6B,AT4G00390,AT3G25010,UNE17,PTAC9,MAF5,PDR12,ATOEP16-S,SYN1,CML39,CNGC18,MAH1,MYB72,ATAMY3,ATERF2,TIP3;1,EMB2729,BOR4,SCA3,ATAMY1,FRO3,EREBP,TIFY11A,MYB87,TIC110,ATNAC5,EMB3008,ERF1,RD29B,ERF11,AtY19,SSIV,BRCA2A,PAP11,ATNOS1,ORG2,ORG3,ATERF4,MAH1,TCP12,PTAC11,RTFL4,MIR319B,EMB2729,PTAC11,PTAC10,HB-5,UBC25,ELC,SAM-2,ELC,CML39,MAF5,MAF5,CYCD7;1,PDR2,PTAC10,SCA3,AtY19,CHX6B,ERF2,MYB15,EDA20,NOA1,ERF4,MYB15,MEE43,NOS1,RAP2.5 RICHTER_GNC-OX/COL-0II_DN Down-[GNC-OX] vs [Col-0II] (Table S2 PubmedID:20844019) ATGH9B15,AT4G28720,AT4G34215,AT4G34800,BGAL14,AT4G14980,AT5G18600,AT5G18850,AT5G48900,AAP4,PUP1,AT3G05730,AT3G01750,BIP3,AT1G77210,CID11,AT1G75380,ATMLP-470,LAC1,AT1G14290,TAT3,AT5G23820,AT1G63350,ATHB28,STP1,AT2G39850,AT1G07690,AT4G11550,ARR11,ATBAG2,JAI3,AT3G32040,AT3G32030,AtRABA4d,AT3G45070,AT3G55290,AT3G62950,AT4G04830,AT4G11190,AT4G29190,AT4G34970,CYP96A9,AT5G07110,AT5G16370,AT5G18130,AT5G44900,AT5G46940,AT5G50260,AT3G15950,OBP4,ATPUP3,ATBZIP27,AT1G14220,ICS2,AT1G63600,AT1G76430,AT1G61270,AT1G67870,HO4,AtTLP2,AT3G02980,AT3G16430,TEL1,AT3G29410,AT3G45080,AT5G16360,AT3G62040,AT4G04840,AT4G11210,AT4G12170,AT1G29090,ATTRE1,CGA1,AT2G45600,UBC17,AT4G37220,AT5G06720,GDH2,AT1G68650,AT5G47000,AT1G57980,AtRABA1f,AT5G62040,AT5G64870,AT1G52330,AT1G06360,AT1G05020,AT1G62510,AT1G23200,AT1G03550,AT5G51720,ELP,AT1G78720,AT1G53980,AT1G14960,ATGA2OX7,AT1G74010,AT5G59080,AT1G68110,AT1G13420,HEMA1,AT1G02816,AT2G30540,ATCTH,SCPL22,AT2G02400,AT2G28120,CYP96A5,AT2G37670,ALPHA-DOX1,AT3G08660,ATNAC2,AT3G27440,AT5G62860,AT1G02660,AT4G15680,CAN,AT3G59340,GLP9,ATFER1,AT3G04360,AT5G11420,AT5G17960,AT5G26200,AT5G44020,AT5G49780,SNRK2-5,AT5G65100,AT3G29970,AT5G04120,CMT1,AT5G39160,MCCA,ATOCT6,AT1G66800,AT1G48660,SS3,IAA6,AT1G58180,CIPK11,AT2G16790,AT2G25150,AT2G37030,AT2G32150,AT3G01260,AT1G36940,AT3G01930,AT3G11840,AtRABC2b,DIN4,RSU1,AT3G48790,ASK5,PGP5,ATTPC1,ATOSM34,AT4G18650,AT1G72800,NLM1,AT4G22050,AT4G28780,AT4G29450,AT4G30660,GGR,AT4G37250,AT1G49780,AT5G26010,AT5G44440,AT5G44920,AT5G47720,AT2G41780,AT1G29520,AT5G54030,AT5G57240,ZFP2,MYB99,AT5G66560,CHR42,NAC1,AT1G23610,AT1G04040,AGP7,ATBCAT-2,BGAL5,AT1G78260,NAP,MEA,NAM,XIF,AT2G37740,AT3G29370,AT3G03910,AT3G50840,ASK10,AT3G16800,NCED3,AT3G10960,AT1G23850,SULTR3;2,AT4G03610,AT1G49320,AT4G30140,AT1G05720,AT5G47950,AT1G64370,AT5G61660,AT5G64100,AT2G31035,AT3G17530,AT2G43210,AT2G23400,AT1G06420,AT1G23160,AT1G08940,AT5G46950,ATMC6,ATOCT3,AT1G15330,GRF11,AT1G66760,AT1G20120,ATALN,AT1G66100,ATMLO9,VHA-E3,AT2G33070,AT2G45220,MEE3,CYP82F1,AT1G07750,HIS1-3,AT3G21720,IQD17,ETO3,AT3G49970,AT1G73120,AT3G51680,ATHB-12,ATPP2-A1,XTR6,LBD19,AT4G27450,AT5G10040,AT4G16500,AT5G01640,AT3G26510,AT1G31290,ANN6,AT5G42180,AT5G42440,AT5G50790,SUM3,AT1G19530,SLAH2,CYP94B1,AT5G64110,ABA2,AT3G42155,AT1G52100,AT1G64590,AT1G23130,AT4G12690,AT1G66360,AT1G36380,AT1G73740,CYP78A10,AT5G67490,AT1G25230,ATDR4,VLN2,CYP96A1,BLH5,AT1G66440,HLH1,AT3G21730,AT3G17020,ATCWINV5,AT3G55180,GATL7,AT4G15620,AT4G24805,AT3G50640,IAA34,AT4G40080,ATHB-2,ATHB40,AT5G14470,AtMIXTA,AT5G16450,STP11,AT5G26250,AT5G02420,AT3G21920,AT5G46530,BXL1,LBD41,TPX2,AT5G57840,AT5G58510,UXS3,AT5G63190,AT5G04330,ATBZIP48,HFR1,THA1,PHYA,AT1G31820,AT1G22490,AT1G21400,AT1G70880,AT1G67860,AT4G27860,AT2G19810,AT2G34080,FLA6,AT5G06930,SCPL11,AT3G14510,AT3G62570,CYCP4;1,AT1G29195,BCAT4,DRT100,AT3G43430,FAMT,AT4G01890,FLA2,AT4G23840,AT4G25220,AT4G30540,CYP81F3,PPDK,PLA V,AT5G05880,AT5G18970,AT5G22410,AT5G44510,MLP34,AT5G45990,AT4G15690,BETA-UP,AT5G21170,AT1G03590,AT5G39865,AT1G61170,CYP79F2,CPK30,MUB5,ATSEC1A,AT1G20180,AT2G19970,ATC,AT2G18480,AT3G05150,AT3G15800,AT3G13270,AT3G56060,AT3G44870,AT4G10780,IRT2,AT5G05890,IQD12,DRM1,AT5G26280,AT1G68630,AT5G40260,AT5G42325,CIPK20,CYP705A5,AT5G52250,HGO,AT5G59670,ATMLO7,AT1G35330,CAT3,AT1G77020,AT1G08800,MLP43,AT1G10560,AT1G11740,AT2G19660,AT1G68450,SCPL5,AT59,AT2G24800,GH3.9,AT1G04990,AT2G32860,ATPMEPCRD,ATPP2-B3,BHLH071,AT1G50630,AT2G48090,AT2G44910,AT4G36850,AT3G18200,AT3G16510,AT3G16670,AT3G45860,ASN1,AT3G49830,AT1G73790,AT3G57680,AT3G61160,AT4G02160,GA1,AT4G11310,NCED4,AT1G09575,PRF4,AT1G67910,HAT1,CYP81D4,AT5G05090,AT5G02720,ATCSLC04,AT5G02550,AT5G59860,COBL5,ATCXE20,BETAG4,AT2G17880,PKS4,AT4G16670,AT1G23830,AT1G64640,NIP6;1,AT1G80960,AT1G09370,AT1G04180,AT5G62560,AT1G03020,IRT3,UGE1,AT1G18530,AT2G05540,ATHM3,MTPB1,AT2G18470,AT2G15010,AGT3,CYP710A2,AT3G26770,ATHCHIB,AT3G53210,AT3G55890,AT3G56080,AT3G61210,ADS1,AT4G11320,MYB105,AT4G24180,MIOX4,ACBP2,AT4G35750,AT4G38690,PIN5,AT5G18350,BR6OX1,AT5G40450,DOG1,ATB5-B,AT5G49660,AT3G19400,HB53,HEC1,AT2G31540,AT5G64180,AT1G63220,ATNAP3,WOX14,AT2G32870,ALS3,AT5G42460,RD20,AT2G38600,LTP2,M10,EXGT-A1,AT2G38100,AT3G05190,AT1G34480,AT1G01390,ATHB24,AT3G29670,AT3G45680,GNC,AT3G55910,AT5G44316,AT3G61990,AT4G08290,AT4G09530,AT1G69570,AT4G19200,GSNAP,AT4G31100,AT4G38700,AT4G30710,AT5G07720,AT2G40420,PAM1,AT5G04380,AT1G09390,AT1G71970,SUC2,RAB7,AT1G14185,AT1G15380,AT1G79700,AT1G77530,AT1G48800,MYB62,AT1G68740,AT1G72570,AOC4,ATEXPA11,XTR4,AT1G16750,AT2G42490,AT2G01900,AT1G01240,AT3G22640,ERD5,AT3G29680,AT3G43670,AT3G49160,AT3G50940,AT3G56930,ATEXT4,AT1G20880,AT4G08300,AT1G06170,AT2G21080,AT4G16000,AT4G28270,AT3G16580,SEN1,ATGCN2,AT1G22250,AtMYB40,AT5G27520,AT5G40100,WRKY8,AT1G49360,AT4G00780,AT1G01640,AT5G66260,AT3G29635,AT1G62450,AT1G03620,AT1G09400,ATGSTU26,AT1G52580,BT1,AT1G27670,ATFRUCT5,AT1G29110,AT1G73260,GLIP3,AT2G41870,AT2G14900,AT2G47550,AT3G04050,AT5G56490,AT3G45700,ATBAG3,AT3G47380,AT3G48185,AT3G53960,AT3G54690,AT3G62930,AT4G10150,ACBP3,AT1G43790,AT4G34790,ATGSTU14,AT4G15400,PGIP2,AT5G14360,AT5G23350,AT1G68620,AT5G42280,AT2353,HSP18.2,AT3G20450,AT1G55240,ACS5,AT5G08350,AT1G23730,AT1G62480,ADH1,AT1G03610,AT1G03400,AT1G12010,AT1G22690,CYP96A3,AT5G04310,AT1G76800,AT2G33230,ABI4,SCPL1,CYP78A6,LHCB2:4,DELTA-TIP,AT3G20370,AT3G21950,AT3G48740,YLS2,AT3G53250,AT4G03010,AT5G54470,AT5G44260,AT4G15660,AT3G16020,AT5G40590,AT2G20950,AT3G28650,PROPEP5,AT1G65370,ATMC3,AT4G23870,AT4G25830,AT2G47780,LCR67,AT1G19660,AT2G47560,AT5G42090,AT3G27770,AT4G14020,AT4G28085,AT5G01970,AT3G54510,AT5G46890,AT3G22250,MT3,AT4G01200,AT4G30670,AT3G29430,AT1G35430,AT3G20570,AT3G44510,LBD25,AT1G69690,AT2G39570,AT4G34630,AT4G01140,SCPL2,AT1G52565,AT2G17850,ATPP2-A13,AT3G47710,COR414-TM1,AT3G53690,AGP26,AT4G12980,AT1G21140,AT1G54010,AT3G18350,ATAGAL2,AT3G15450,AT5G23460,AT4G36060,AT4G15093,AT2G30600,AT5G18780,AT2G05260,AT1G54740,AT1G22885,AT3G16410,AT3G55240,AT5G21050,AT4G25860,AT5G07770,AT1G22110,AT4G39360,AT3G28857,AT5G49080,AT4G16745,AT5G25415,AT5G24313,MEE66,AT2G33350,AT4G01735,AT1G12450,AT4G13530,AT1G30515,AT5G10310,AT2G19610,HR1,AT3G30340,AT1G20990,AT5G10210,AT5G42410,AT5G46960,AT1G75060,AT3G59900,HVA22F,AT3G46880,AT4G15960,AT3G03870,FHL,SIM,AT3G16660,AT1G63950,AT1G72620,AT1G76230,AT1G72690,AT3G09340,AT1G67865,AT3G16900,AT1G08270,GLTP2,AT3G48020,AT4G15670,AT3G27030,AT1G76220,AT3G14595,AT3G50350,AT1G08160,AT1G29420,AT1G49500,MIR156C,AT5G67020,AT4G09170,AT1G69450,AT1G11690,AT1G26250,AT4G17470,AT4G22214,AT1G15040,AT4G37295,AT5G48175,AT2G01050,LBD28,AT2G21990,AT1G76610,AT4G23030,AT3G49820,AT1G28260,AT3G59230,ACT8,AT4G13030,SLAH1,AT4G23493,AT2G18270,DVL13,AT4G10265,AT5G57640,DVL11,AT4G32000,AT3G13980,AT2G36540,AT5G09710,AT1G19397,AT3G06220,AT1G61160,AT5G40900,AT5G41080,AT2G20080,AT5G54530,AT1G62620,AT3G07570,AT4G12370,AT1G22680,AT5G02930,AT1G25480,AT2G34000,AT3G10815,AT3G57780,AT4G28703,AT5G03310,RALFL17,AT2G40910,AT4G01330,AT4G14305,AT1G19394,AT2G17680,AT4G16515,AT5G64190,AT5G57830,DVL9,AT4G37860,AT2G45610,AT3G11000,AT4G35690,PCC1,MBD3,AT5G40645,SEC14,AT2G43535,AT4G19920,AT2G26695,AT5G49200,AT4G01390,AT4G31110,ATNUDT24,AT1G49330,AT2G32050,AT4G22230,AT5G52990,AT5G43120,AT4G32480,ATOFP16,AT3G07460,WNK3,AT4G11211,AT5G06470,AT2G46640,AT5G01075,AT1G45015,AT2G34315,AT4G23380,AT3G07425,AT1G71015,AT2G36895,AT3G01960,AT5G48950,AT2G04800,AT4G22217,AT1G54280,AT2G22560,AT2G25200,AT1G10220,AT1G24575,AT5G20045,AT1G10385,AT1G64065,AT5G41300,AT3G14810,AT4G35210,AT4G03420,AT5G18000,AT5G60060,AT1G64360,MIOX5,AT3G48115,AT2G27535,AT3G12502,AT5G53160,AT1G66173,AT5G11610,AT3G61198,AT1G08165,AT5G06865,AT1G67105,AT5G64430,AT5G15290,AT1G70885,AT1G49370,AT1G21220,AT3G63050,YAB2,AT1G12080,AT1G51802,DVL3,AT1G78265,AT1G13448,AT1G04295,AT1G74458,MLP28,AT1G25209,AT1G33102,AT1G15015,AT2G06985,SYP112,AT2G34020,AT2G07700,AT2G07716,ZIP7,AT2G32885,AT2G31585,AT2G24545,AT2G21188,AT2G18328,AT2G26355,AT2G41475,AT2G36261,AT2G18969,AT3G16390,AT3G31395,AT3G16175,AT3G31415,AT3G31425,AT3G53010,SRO4,AT3G08885,AT3G08890,AT3G27095,AT3G44326,AT3G05727,DVL8,AT3G13277,BRC1,AT4G07700,AT4G05616,AT4G08093,ARPC4,AT4G11393,AT4G22485,AT4G22505,AT4G26255,AT4G04223,AT4G21745,AT4G24973,AT4G17908,GLP2A,AT5G34905,AT5G27043,AT5G57770,AT5G56830,AT5G23955,AT5G62623,DVL1,AT5G38005,AT5G41761,SVP,ATEXT3,AT5G03120,AT2G30150,AGP16,AT1G06980,AT5G58340,AT1G28700,AT1G52650,EDA21,AT1G15175,AT3G46540,NRPB1,AT4G27460,AT1G21510,AT4G36110,AT4G38470,AT5G67410,AT2G22660,AT3G13720,AT3G18490,PSAD-2,AT1G18020,AT1G76460,EDA30,AT2G37320,AT3G16460,AT2G32690,AGP9,AT5G42200,TIP2,AT5G46730,PYK10,PBP1,AT1G80160,AT3G15630,AT5G22920,AT5G39130,ATHB-1,AT5G46900,MYB3,AT4G18390,AT1G19330,CORI3,AT3G10250,CYP708A2,AFO,AT3G22800,AT3G14270,AT1G74830,AT5G45850,AT1G50190,AT2G03360,CBL8,JAZ4,AT1G29490,UGE5,AT3G16450,AT5G42235,AT2G38360,AT5G44417,AT3G63360,AT3G01430,AT2G21830,ATOFP9,AT5G49300,CLE2,AT5G06480,JAZ3,FDP,TRE1,SNRK2.5,AtRab18C,MLO9,PAR1,HB-5,AtMYB16,PLP4,MLO7,ATGA20OX2,PDF1.1,ATAGP26,RTFL2,RTFL8,RTFL3,OFP16,RTFL21,RTFL7,TCP18,RTFL18,TIFY6A,OFP9,TIFY6B,SRK2H,GA20OX2 RICHTER_GNL-OX/COL-0II_DN Down-[GNL-OX] vs [Col-0II] (Table S2 PubmedID:20844019) 2A6,4CL2,4CL5,AAP2,AAP4,ABA2,ACA9,ACAT2,ACBP2,ACBP3,ACO1,ACP1,ACS5,ACS8,ACT8,ACX4,ADOF2,ADPG1,ADS1,ADT5,AFO,AGD11,AGL19,AGL42,AGP2,AGP22,AGP26,AGP3,AGP4,AGP7,AGP9,AGT3,AHA7,AHB1,AHG3,AHP4,AIR1,AKN2,ALL1,ALPHA-DOX1,ALS3,AMC6,AML2,AML5,ANAC010,ANAC016,ANAC038,ANAC039,ANAC058,ANAC074,ANAC099,ANAC105,ANN6,ANN7,ANNAT1,ANNAT2,ANNAT3,ANNAT7,ANR1,AOC4,AOP2,AOS,AP3,APUM4,ARF11,ARF20,ARPC4,ARR11,ARR2,ARR3,ARR5,ARR6,ASK10,ASK5,ASL16,ASN1,ASP4,AST56,AST68,AT1G01180,AT1G01240,AT1G01390,AT1G01453,AT1G01630,AT1G01640,AT1G01660,AT1G01670,AT1G01750,AT1G02040,AT1G02350,AT1G02570,AT1G02660,AT1G02810,AT1G02816,AT1G03010,AT1G03020,AT1G03200,AT1G03290,AT1G03400,AT1G03550,AT1G03590,AT1G03610,AT1G03620,AT1G03700,AT1G04040,AT1G04180,AT1G04220,AT1G04295,AT1G04990,AT1G05020,AT1G05220,AT1G05250,AT1G05320,AT1G05720,AT1G05805,AT1G05990,AT1G06100,AT1G06170,AT1G06360,AT1G06420,AT1G06620,AT1G06640,AT1G06800,AT1G06980,AT1G07040,AT1G07260,AT1G07690,AT1G07750,AT1G07795,AT1G08165,AT1G08270,AT1G08310,AT1G08500,AT1G08590,AT1G08800,AT1G08890,AT1G08900,AT1G08940,AT1G09176,AT1G09250,AT1G09370,AT1G09390,AT1G09575,AT1G09910,AT1G10220,AT1G10300,AT1G10385,AT1G10560,AT1G10585,AT1G10790,AT1G11120,AT1G11185,AT1G11360,AT1G11410,AT1G11545,AT1G11655,AT1G11684,AT1G11690,AT1G11740,AT1G11803,AT1G12010,AT1G12080,AT1G12150,AT1G12160,AT1G12200,AT1G12450,AT1G12490,AT1G12805,AT1G12950,AT1G12970,AT1G13130,AT1G13170,AT1G13420,AT1G13448,AT1G13530,AT1G13700,AT1G13990,AT1G14120,AT1G14130,AT1G14170,AT1G14185,AT1G14200,AT1G14220,AT1G14290,AT1G14390,AT1G14960,AT1G15015,AT1G15040,AT1G15175,AT1G15350,AT1G15380,AT1G15400,AT1G15620,AT1G15630,AT1G15740,AT1G16440,AT1G16705,AT1G16750,AT1G16905,AT1G17310,AT1G17400,AT1G18000,AT1G18020,AT1G18180,AT1G18290,AT1G18420,AT1G18530,AT1G18960,AT1G18980,AT1G19190,AT1G19230,AT1G19330,AT1G19397,AT1G19530,AT1G19540,AT1G19560,AT1G19660,AT1G19900,AT1G19960,AT1G20070,AT1G20120,AT1G20180,AT1G20880,AT1G20990,AT1G21100,AT1G21140,AT1G21220,AT1G21400,AT1G21510,AT1G21830,AT1G22110,AT1G22160,AT1G22180,AT1G22250,AT1G22290,AT1G22440,AT1G22490,AT1G22680,AT1G22690,AT1G22910,AT1G23040,AT1G23060,AT1G23130,AT1G23150,AT1G23160,AT1G23200,AT1G23530,AT1G23540,AT1G23730,AT1G23830,AT1G23850,AT1G24130,AT1G24160,AT1G24240,AT1G24420,AT1G24430,AT1G24575,AT1G25230,AT1G25240,AT1G25275,AT1G25370,AT1G25480,AT1G26360,AT1G26773,AT1G27670,AT1G27740,AT1G28260,AT1G28390,AT1G28700,AT1G29000,AT1G29090,AT1G29100,AT1G29160,AT1G29195,AT1G29380,AT1G29420,AT1G29450,AT1G29490,AT1G29540,AT1G29660,AT1G30050,AT1G30140,AT1G30515,AT1G30750,AT1G30850,AT1G30870,AT1G31040,AT1G31290,AT1G31310,AT1G31490,AT1G31690,AT1G31710,AT1G31820,AT1G31990,AT1G32585,AT1G32950,AT1G33090,AT1G33340,AT1G33800,AT1G34040,AT1G34060,AT1G34330,AT1G34480,AT1G34490,AT1G34510,AT1G34520,AT1G35190,AT1G35270,AT1G35330,AT1G35430,AT1G35610,AT1G35625,AT1G35630,AT1G35700,AT1G36380,AT1G36940,AT1G42490,AT1G43040,AT1G43140,AT1G43790,AT1G43800,AT1G44160,AT1G44180,AT1G44970,AT1G45010,AT1G45015,AT1G45545,AT1G47610,AT1G48070,AT1G48640,AT1G48700,AT1G48800,AT1G48820,AT1G49330,AT1G49360,AT1G49370,AT1G49450,AT1G49500,AT1G49570,AT1G49640,AT1G49780,AT1G49960,AT1G50190,AT1G50390,AT1G50580,AT1G50630,AT1G51802,AT1G52100,AT1G52190,AT1G52330,AT1G52565,AT1G52580,AT1G52650,AT1G52660,AT1G52750,AT1G52800,AT1G53035,AT1G53180,AT1G53270,AT1G53400,AT1G53860,AT1G53870,AT1G53885,AT1G53980,AT1G54000,AT1G54010,AT1G54020,AT1G54740,AT1G54790,AT1G55240,AT1G55290,AT1G56020,AT1G56080,AT1G56220,AT1G56320,AT1G56550,AT1G56630,AT1G56710,AT1G57570,AT1G57980,AT1G58037,AT1G58160,AT1G58180,AT1G58320,AT1G58725,AT1G59030,AT1G59725,AT1G59970,AT1G60050,AT1G60120,AT1G60525,AT1G60630,AT1G61160,AT1G61170,AT1G61270,AT1G61410,AT1G62450,AT1G62480,AT1G62510,AT1G62540,AT1G62560,AT1G62570,AT1G62620,AT1G62660,AT1G62790,AT1G63010,AT1G63220,AT1G63350,AT1G63450,AT1G63530,AT1G63600,AT1G63950,AT1G64065,AT1G64360,AT1G64370,AT1G64590,AT1G64640,AT1G64920,AT1G65370,AT1G65450,AT1G65570,AT1G65860,AT1G66100,AT1G66173,AT1G66270,AT1G66280,AT1G66360,AT1G66440,AT1G66450,AT1G66470,AT1G66760,AT1G66800,AT1G66830,AT1G67105,AT1G67330,AT1G67750,AT1G67860,AT1G67865,AT1G67870,AT1G67910,AT1G67930,AT1G68110,AT1G68300,AT1G68330,AT1G68450,AT1G68620,AT1G68650,AT1G68740,AT1G68850,AT1G69080,AT1G69160,AT1G69240,AT1G69360,AT1G69450,AT1G69570,AT1G69690,AT1G70130,AT1G70680,AT1G70810,AT1G70880,AT1G70885,AT1G70990,AT1G71015,AT1G71410,AT1G71910,AT1G71970,AT1G72140,AT1G72210,AT1G72620,AT1G72690,AT1G72800,AT1G72840,AT1G73040,AT1G73120,AT1G73260,AT1G73340,AT1G73480,AT1G73580,AT1G73740,AT1G73790,AT1G73870,AT1G74010,AT1G74090,AT1G74300,AT1G74458,AT1G74460,AT1G74780,AT1G74830,AT1G75060,AT1G75220,AT1G75280,AT1G75300,AT1G75380,AT1G75500,AT1G75620,AT1G75717,AT1G75800,AT1G75960,AT1G76220,AT1G76230,AT1G76250,AT1G76430,AT1G76460,AT1G76610,AT1G76640,AT1G76705,AT1G76790,AT1G76800,AT1G77020,AT1G77131,AT1G77210,AT1G77520,AT1G77525,AT1G77530,AT1G77660,AT1G77730,AT1G77855,AT1G78260,AT1G78265,AT1G78700,AT1G78850,AT1G78895,AT1G78990,AT1G79250,AT1G79700,AT1G80120,AT1G80160,AT1G80240,AT1G80290,AT1G80420,AT1G80440,AT1G80960,AT2353,AT2G01580,AT2G01610,AT2G01660,AT2G01900,AT2G01990,AT2G02400,AT2G02690,AT2G03200,AT2G03360,AT2G04190,AT2G04480,AT2G04500,AT2G04650,AT2G04800,AT2G05115,AT2G05260,AT2G05540,AT2G05910,AT2G06985,AT2G07700,AT2G11880,AT2G12646,AT2G14820,AT2G14900,AT2G15220,AT2G15960,AT2G16005,AT2G16405,AT2G16575,AT2G16790,AT2G16830,AT2G16980,AT2G16990,AT2G17500,AT2G17590,AT2G17680,AT2G17850,AT2G17880,AT2G18010,AT2G18100,AT2G18150,AT2G18200,AT2G18210,AT2G18328,AT2G18360,AT2G18370,AT2G18470,AT2G18480,AT2G18969,AT2G19200,AT2G19410,AT2G19610,AT2G19660,AT2G19810,AT2G19970,AT2G20080,AT2G20515,AT2G20950,AT2G21100,AT2G21185,AT2G21188,AT2G21430,AT2G21560,AT2G21830,AT2G21990,AT2G22080,AT2G22125,AT2G22170,AT2G22480,AT2G22510,AT2G22560,AT2G22660,AT2G22750,AT2G22760,AT2G22930,AT2G23050,AT2G23120,AT2G23400,AT2G23540,AT2G23970,AT2G24070,AT2G24300,AT2G24545,AT2G24560,AT2G24755,AT2G24980,AT2G25130,AT2G25150,AT2G25200,AT2G25220,AT2G25300,AT2G25625,AT2G25770,AT2G25820,AT2G25980,AT2G26355,AT2G26370,AT2G26480,AT2G26690,AT2G26692,AT2G26695,AT2G26975,AT2G27370,AT2G27440,AT2G27540,AT2G28120,AT2G28360,AT2G28440,AT2G28670,AT2G28680,AT2G28755,AT2G28840,AT2G28940,AT2G29620,AT2G29660,AT2G29710,AT2G29750,AT2G30150,AT2G30362,AT2G30540,AT2G30550,AT2G30600,AT2G30880,AT2G30930,AT2G30942,AT2G31390,AT2G31540,AT2G31585,AT2G32150,AT2G32235,AT2G32487,AT2G32560,AT2G32690,AT2G32750,AT2G32860,AT2G32870,AT2G32885,AT2G33070,AT2G33230,AT2G33850,AT2G34000,AT2G34010,AT2G34020,AT2G34080,AT2G34330,AT2G34350,AT2G34610,AT2G34760,AT2G34840,AT2G34930,AT2G35000,AT2G35050,AT2G35150,AT2G35380,AT2G35760,AT2G35990,AT2G36120,AT2G36261,AT2G36540,AT2G36650,AT2G36895,AT2G37035,AT2G37150,AT2G37290,AT2G37320,AT2G37360,AT2G37670,AT2G37740,AT2G37900,AT2G37950,AT2G37980,AT2G38060,AT2G38090,AT2G38100,AT2G38152,AT2G38360,AT2G38500,AT2G38510,AT2G38600,AT2G38740,AT2G38790,AT2G38995,AT2G39040,AT2G39050,AT2G39130,AT2G39310,AT2G39330,AT2G39510,AT2G39570,AT2G39750,AT2G39850,AT2G40050,AT2G40130,AT2G40420,AT2G40530,AT2G40640,AT2G41312,AT2G41475,AT2G41480,AT2G41780,AT2G41870,AT2G41970,AT2G42380,AT2G42490,AT2G42660,AT2G42900,AT2G43210,AT2G43230,AT2G43390,AT2G43535,AT2G43670,AT2G44060,AT2G44140,AT2G44260,AT2G44430,AT2G44480,AT2G44500,AT2G44850,AT2G44910,AT2G45220,AT2G45600,AT2G45610,AT2G45750,AT2G45940,AT2G46000,AT2G46140,AT2G46300,AT2G46535,AT2G46640,AT2G46850,AT2G47200,AT2G47360,AT2G47440,AT2G47540,AT2G47550,AT2G47560,AT2G48090,AT3G01430,AT3G01520,AT3G01730,AT3G01750,AT3G01760,AT3G01840,AT3G01930,AT3G01960,AT3G02020,AT3G02460,AT3G02930,AT3G02980,AT3G03000,AT3G03180,AT3G03270,AT3G03290,AT3G03520,AT3G03700,AT3G03850,AT3G03870,AT3G03910,AT3G04330,AT3G04360,AT3G04370,AT3G04485,AT3G05150,AT3G05165,AT3G05190,AT3G05640,AT3G05727,AT3G05730,AT3G05860,AT3G05950,AT3G06210,AT3G06220,AT3G06390,AT3G06410,AT3G06470,AT3G06740,AT3G06868,AT3G06962,AT3G07010,AT3G07070,AT3G07425,AT3G07570,AT3G07600,AT3G07880,AT3G07900,AT3G07970,AT3G08630,AT3G08660,AT3G08860,AT3G08885,AT3G09020,AT3G09085,AT3G09340,AT3G09410,AT3G09550,AT3G09925,AT3G09950,AT3G10250,AT3G10420,AT3G10470,AT3G10630,AT3G10710,AT3G10780,AT3G10815,AT3G10960,AT3G10986,AT3G11180,AT3G11385,AT3G11840,AT3G12502,AT3G12540,AT3G12710,AT3G13270,AT3G13430,AT3G13650,AT3G13672,AT3G13690,AT3G13720,AT3G13950,AT3G13980,AT3G14067,AT3G14150,AT3G14380,AT3G14395,AT3G14510,AT3G14520,AT3G14530,AT3G14540,AT3G14595,AT3G14810,AT3G15240,AT3G15250,AT3G15700,AT3G15740,AT3G15950,AT3G16020,AT3G16175,AT3G16390,AT3G16410,AT3G16430,AT3G16450,AT3G16460,AT3G16510,AT3G16580,AT3G16660,AT3G16670,AT3G16800,AT3G16850,AT3G16900,AT3G17020,AT3G17365,AT3G17810,AT3G17940,AT3G18200,AT3G18350,AT3G18490,AT3G19390,AT3G19400,AT3G19553,AT3G19620,AT3G19640,AT3G19680,AT3G19990,AT3G20370,AT3G20510,AT3G20570,AT3G20830,AT3G20935,AT3G21330,AT3G21460,AT3G21730,AT3G21755,AT3G21950,AT3G22142,AT3G22250,AT3G22850,AT3G23480,AT3G23660,AT3G24020,AT3G24210,AT3G24535,AT3G24715,AT3G24750,AT3G25130,AT3G25240,AT3G26100,AT3G26510,AT3G26550,AT3G26770,AT3G27095,AT3G27190,AT3G27210,AT3G27220,AT3G27250,AT3G27440,AT3G27770,AT3G27884,AT3G28100,AT3G28550,AT3G28650,AT3G28857,AT3G29250,AT3G29252,AT3G29370,AT3G29410,AT3G29430,AT3G29575,AT3G29635,AT3G29670,AT3G29680,AT3G29970,AT3G30340,AT3G30580,AT3G30841,AT3G31415,AT3G31425,AT3G32030,AT3G32040,AT3G42155,AT3G42800,AT3G43110,AT3G43670,AT3G43930,AT3G44326,AT3G44510,AT3G44540,AT3G44550,AT3G44870,AT3G45070,AT3G45080,AT3G45160,AT3G45230,AT3G45530,AT3G45680,AT3G45700,AT3G45850,AT3G45860,AT3G46880,AT3G47380,AT3G47420,AT3G47710,AT3G47820,AT3G48020,AT3G48185,AT3G48340,AT3G48400,AT3G48450,AT3G48510,AT3G48720,AT3G48740,AT3G48790,AT3G48940,AT3G48970,AT3G49160,AT3G49210,AT3G49330,AT3G49590,AT3G49790,AT3G49820,AT3G49830,AT3G49920,AT3G49930,AT3G49950,AT3G49960,AT3G49970,AT3G50050,AT3G50120,AT3G50130,AT3G50230,AT3G50280,AT3G50290,AT3G50300,AT3G50350,AT3G50390,AT3G50400,AT3G50590,AT3G50640,AT3G50840,AT3G50940,AT3G51410,AT3G51540,AT3G51680,AT3G51960,AT3G52060,AT3G52440,AT3G52550,AT3G52720,AT3G52790,AT3G53010,AT3G53210,AT3G53250,AT3G53510,AT3G53600,AT3G53690,AT3G53840,AT3G53950,AT3G53960,AT3G54120,AT3G54250,AT3G54510,AT3G54580,AT3G54600,AT3G54625,AT3G54690,AT3G54770,AT3G55090,AT3G55180,AT3G55230,AT3G55240,AT3G55290,AT3G55310,AT3G55550,AT3G55720,AT3G55890,AT3G55900,AT3G55910,AT3G55970,AT3G56060,AT3G56080,AT3G56200,AT3G56230,AT3G56275,AT3G56410,AT3G56620,AT3G56930,AT3G57680,AT3G57740,AT3G57780,AT3G57800,AT3G57950,AT3G58120,AT3G58540,AT3G58720,AT3G58990,AT3G59130,AT3G59230,AT3G59300,AT3G59340,AT3G59370,AT3G59730,AT3G59830,AT3G59900,AT3G60940,AT3G61028,AT3G61160,AT3G61198,AT3G61210,AT3G61680,AT3G61750,AT3G61810,AT3G61990,AT3G62040,AT3G62320,AT3G62570,AT3G62590,AT3G62730,AT3G62930,AT3G62950,AT3G63050,AT3G63360,AT3G63430,AT4G00130,AT4G00200,AT4G00355,AT4G00670,AT4G00680,AT4G00780,AT4G00905,AT4G00910,AT4G01110,AT4G01140,AT4G01200,AT4G01330,AT4G01360,AT4G01380,AT4G01390,AT4G01735,AT4G01890,AT4G02090,AT4G02160,AT4G02270,AT4G02320,AT4G02630,AT4G03420,AT4G03610,AT4G04460,AT4G04630,AT4G04810,AT4G04830,AT4G04840,AT4G04990,AT4G05010,AT4G05150,AT4G05616,AT4G08290,AT4G08300,AT4G08330,AT4G08400,AT4G08410,AT4G08570,AT4G09170,AT4G09480,AT4G09530,AT4G09630,AT4G09990,AT4G10150,AT4G10720,AT4G10910,AT4G11190,AT4G11210,AT4G11211,AT4G11310,AT4G11320,AT4G11550,AT4G11610,AT4G11780,AT4G11945,AT4G11950,AT4G12030,AT4G12170,AT4G12370,AT4G12450,AT4G12510,AT4G12520,AT4G12545,AT4G12690,AT4G12980,AT4G13030,AT4G13530,AT4G13580,AT4G13790,AT4G13860,AT4G13920,AT4G14020,AT4G14060,AT4G14270,AT4G14305,AT4G14380,AT4G14650,AT4G14819,AT4G14980,AT4G15093,AT4G15120,AT4G15150,AT4G15270,AT4G15400,AT4G15620,AT4G15960,AT4G16000,AT4G16015,AT4G16400,AT4G16500,AT4G16515,AT4G16620,AT4G16640,AT4G16670,AT4G16745,AT4G16892,AT4G17100,AT4G17215,AT4G17260,AT4G17280,AT4G17350,AT4G17470,AT4G17480,AT4G18390,AT4G18450,AT4G18550,AT4G18650,AT4G19200,AT4G19420,AT4G19860,AT4G19920,AT4G19970,AT4G20140,AT4G20230,AT4G20300,AT4G20390,AT4G20820,AT4G20880,AT4G21740,AT4G21745,AT4G21780,AT4G21830,AT4G21840,AT4G22050,AT4G22110,AT4G22212,AT4G22214,AT4G22217,AT4G22230,AT4G22235,AT4G22485,AT4G22505,AT4G22610,AT4G22666,AT4G22810,AT4G22960,AT4G23030,AT4G23380,AT4G23493,AT4G23515,AT4G23590,AT4G23670,AT4G23690,AT4G23840,AT4G23870,AT4G24180,AT4G24340,AT4G24580,AT4G24805,AT4G25010,AT4G25220,AT4G25400,AT4G25410,AT4G25433,AT4G25790,AT4G25850,AT4G25860,AT4G25900,AT4G26180,AT4G26770,AT4G26950,AT4G27100,AT4G27290,AT4G27300,AT4G27450,AT4G27460,AT4G27480,AT4G27860,AT4G28085,AT4G28088,AT4G28270,AT4G28330,AT4G28340,AT4G28350,AT4G28650,AT4G28703,AT4G28720,AT4G28770,AT4G28780,AT4G28840,AT4G28850,AT4G28940,AT4G29190,AT4G29270,AT4G29450,AT4G29690,AT4G29700,AT4G29710,AT4G30140,AT4G30170,AT4G30420,AT4G30540,AT4G30630,AT4G30650,AT4G30660,AT4G30670,AT4G30710,AT4G30730,AT4G31100,AT4G31110,AT4G31890,AT4G32000,AT4G32480,AT4G33130,AT4G33310,AT4G33560,AT4G33565,AT4G33730,AT4G33910,AT4G34215,AT4G34250,AT4G34320,AT4G34330,AT4G34580,AT4G34630,AT4G34790,AT4G34800,AT4G34970,AT4G35150,AT4G35160,AT4G35190,AT4G35210,AT4G35380,AT4G35690,AT4G35720,AT4G35750,AT4G35780,AT4G35985,AT4G36110,AT4G36430,AT4G36610,AT4G36830,AT4G36850,AT4G37010,AT4G37220,AT4G37250,AT4G37295,AT4G37520,AT4G37530,AT4G37850,AT4G37860,AT4G37970,AT4G38080,AT4G38410,AT4G38470,AT4G38690,AT4G38700,AT4G39230,AT4G39360,AT4G39590,AT4G39720,AT4G39770,AT4G39795,AT4G40080,AT4G40085,AT59,AT5G01170,AT5G01280,AT5G01530,AT5G01610,AT5G01620,AT5G01640,AT5G01830,AT5G01870,AT5G01880,AT5G01970,AT5G01990,AT5G02000,AT5G02070,AT5G02170,AT5G02230,AT5G02420,AT5G02550,AT5G02720,AT5G03120,AT5G03200,AT5G03230,AT5G03310,AT5G03490,AT5G03545,AT5G03570,AT5G03640,AT5G03890,AT5G04080,AT5G04120,AT5G04310,AT5G04330,AT5G04960,AT5G05090,AT5G05160,AT5G05380,AT5G05500,AT5G05830,AT5G05850,AT5G05880,AT5G05890,AT5G05900,AT5G05960,AT5G06470,AT5G06480,AT5G06630,AT5G06640,AT5G06720,AT5G06730,AT5G06865,AT5G06930,AT5G07010,AT5G07110,AT5G07250,AT5G07475,AT5G07610,AT5G07620,AT5G07720,AT5G07770,AT5G07820,AT5G08250,AT5G08770,AT5G09430,AT5G09480,AT5G09520,AT5G09530,AT5G09710,AT5G10040,AT5G10210,AT5G10250,AT5G10570,AT5G10770,AT5G11040,AT5G11420,AT5G11610,AT5G11970,AT5G12170,AT5G12200,AT5G12270,AT5G12420,AT5G12940,AT5G12960,AT5G12970,AT5G13580,AT5G14130,AT5G14150,AT5G14200,AT5G14360,AT5G14470,AT5G14690,AT5G14940,AT5G15120,AT5G15180,AT5G15290,AT5G15500,AT5G15725,AT5G16030,AT5G16110,AT5G16170,AT5G16360,AT5G16370,AT5G16450,AT5G16730,AT5G16900,AT5G17340,AT5G17390,AT5G17430,AT5G17590,AT5G17720,AT5G17820,AT5G17960,AT5G18000,AT5G18010,AT5G18020,AT5G18030,AT5G18050,AT5G18060,AT5G18080,AT5G18130,AT5G18340,AT5G18350,AT5G18530,AT5G18550,AT5G18600,AT5G18650,AT5G18661,AT5G18780,AT5G18850,AT5G18910,AT5G18970,AT5G19100,AT5G19110,AT5G19140,AT5G19410,AT5G20045,AT5G20810,AT5G20860,AT5G21050,AT5G21105,AT5G21130,AT5G21170,AT5G22250,AT5G22310,AT5G22355,AT5G22410,AT5G22430,AT5G22500,AT5G23160,AT5G23170,AT5G23460,AT5G23700,AT5G23750,AT5G23820,AT5G23830,AT5G23840,AT5G24100,AT5G24190,AT5G24290,AT5G24313,AT5G24580,AT5G24655,AT5G25020,AT5G25190,AT5G25280,AT5G25640,AT5G26010,AT5G26200,AT5G26250,AT5G26260,AT5G26270,AT5G26290,AT5G27520,AT5G35110,AT5G35940,AT5G35950,AT5G36130,AT5G36260,AT5G37690,AT5G37790,AT5G37860,AT5G37940,AT5G37950,AT5G37970,AT5G37980,AT5G37990,AT5G38000,AT5G38005,AT5G38020,AT5G38030,AT5G38200,AT5G38540,AT5G38550,AT5G38710,AT5G39130,AT5G39160,AT5G39320,AT5G39471,AT5G39520,AT5G39730,AT5G39865,AT5G40100,AT5G40450,AT5G40451,AT5G40590,AT5G40690,AT5G40800,AT5G40860,AT5G40900,AT5G41080,AT5G41470,AT5G41730,AT5G41761,AT5G42090,AT5G42180,AT5G42200,AT5G42210,AT5G42235,AT5G42280,AT5G42325,AT5G42440,AT5G42460,AT5G42510,AT5G42570,AT5G42655,AT5G42690,AT5G42860,AT5G42870,AT5G42930,AT5G43030,AT5G43060,AT5G43120,AT5G43175,AT5G43330,AT5G43690,AT5G44020,AT5G44260,AT5G44316,AT5G44350,AT5G44400,AT5G44417,AT5G44440,AT5G44550,AT5G44900,AT5G44920,AT5G45210,AT5G45350,AT5G45580,AT5G45850,AT5G45990,AT5G46150,AT5G46340,AT5G46730,AT5G46830,AT5G46890,AT5G46900,AT5G46940,AT5G46950,AT5G47000,AT5G47590,AT5G47635,AT5G47720,AT5G47818,AT5G47950,AT5G47980,AT5G48010,AT5G48160,AT5G48650,AT5G48900,AT5G48940,AT5G48950,AT5G49080,AT5G49200,AT5G49280,AT5G49300,AT5G49350,AT5G49660,AT5G49690,AT5G49710,AT5G49780,AT5G49870,AT5G49900,AT5G50150,AT5G50260,AT5G50335,AT5G50790,AT5G50800,AT5G50950,AT5G51390,AT5G51470,AT5G51790,AT5G51890,AT5G52250,AT5G52990,AT5G53870,AT5G53990,AT5G54150,AT5G54470,AT5G54530,AT5G55050,AT5G55350,AT5G55690,AT5G56490,AT5G56750,AT5G56830,AT5G57070,AT5G57240,AT5G57320,AT5G57480,AT5G57530,AT5G57625,AT5G57640,AT5G57660,AT5G57670,AT5G57770,AT5G57830,AT5G57840,AT5G58310,AT5G58340,AT5G58390,AT5G58500,AT5G58510,AT5G58730,AT5G58780,AT5G59080,AT5G59130,AT5G59220,AT5G59530,AT5G59580,AT5G59860,AT5G59960,AT5G60130,AT5G60350,AT5G60460,AT5G61260,AT5G61340,AT5G61660,AT5G62040,AT5G62280,AT5G62560,AT5G62580,AT5G62623,AT5G62860,AT5G63190,AT5G63270,AT5G63500,AT5G63560,AT5G63595,AT5G63710,AT5G64110,AT5G64180,AT5G64190,AT5G64220,AT5G64430,AT5G64450,AT5G64870,AT5G65160,AT5G65683,AT5G65750,AT5G65910,AT5G65990,AT5G66170,AT5G66260,AT5G66560,AT5G66580,AT5G66590,AT5G66660,AT5G67020,AT5G67140,AT5G67230,AT5G67430,AT5G67490,ATACP5,ATAGAL2,ATAGP22,ATAGP26,ATALN,ATATH11,ATATH5,ATB5-B,ATBAG2,ATBAG3,ATBCAT-2,ATBETAFRUCT4,ATBZIP52,ATCAX5,ATCEL3,ATCNGC14,ATCSLA09,ATCSLB05,ATCSLC04,ATCTH,ATCWINV5,ATCXE20,ATCYSD2,ATDR4,ATELC-LIKE,ATEXLA1,ATEXLB1,ATEXO70C1,ATEXO70C2,ATEXO70G2,ATEXPA11,ATEXPA12,ATEXPA18,ATEXPA20,ATEXPA3,ATEXPA7,ATEXPA8,ATEXT3,ATFRO8,ATFRUCT5,ATG8B,ATG8F,ATG8G,ATGA20OX2,ATGA2OX1,ATGA2OX7,ATGA2OX8,ATGGH2,ATGH9B15,ATGH9B3,ATGH9B5,ATGH9C1,ATGH9C2,ATGLR2.5,ATGNA1,ATGOLS3,ATGOLS4,ATGOLS7,ATGPAT2,ATGPAT5,ATGPAT7,ATGRP2B,ATGSTF11,ATGSTF13,ATGSTF14,ATGSTU14,ATGSTU26,ATGSTU27,ATGSTU28,ATGSTU6,ATHB-1,ATHB-12,ATHB13,ATHB-2,ATHB20,ATHB22,ATHB23,ATHB24,ATHB28,ATHB40,ATHB52,ATHCHIB,ATHM3,AT-HSFA6A,AT-HSFB3,AT-HSFC1,ATHVA22E,ATIDD4,ATL6,ATMAPR2,ATMC3,ATMC4,ATMC5,ATMC6,ATMC7,ATMCP2B,ATMDAR3,AtMIXTA,ATMLP-470,ATMPK2,AtMYB14,AtMYB16,AtMYB19,ATMYB34,AtMYB40,ATMYB5,AtMYB58,ATMYB61,AtMYB9,AtMYB93,ATNAC2,ATNADP-ME3,ATNAP3,ATNRT2:1,ATNUDT15,ATNUDT24,ATOCT4,ATOCT6,ATOFP11,ATOFP12,ATOFP13,ATOFP15,ATOFP16,ATOFP17,ATOFP9,ATOPT7,ATOSM34,AT-P4H-2,ATPAP14,ATPAP16,ATPAP20,ATPAP24,ATPAP7,ATPCA,ATPDIL1-3,ATPDR11,ATPDR2,ATPEN3,ATPME2,ATPMEPCRD,ATPP2-A1,ATPP2-A13,ATPP2-A14,ATPP2-B11,ATPP2-B3,ATPP2CA,ATPPA3,ATPPA4,ATPPA5,ATPRP1,ATPRX33,ATPUP2,ATPUP20,ATR1,AtRab18C,AtRab7A,AtRABA1e,AtRABA1f,AtRABA2b,AtRABA3,AtRABA4d,AtRABC2b,AtRABG2,AtRABH1e,ATROPGEF10,ATROPGEF11,ATROPGEF12,ATS,ATSAT1,ATSDAT,ATSEC20,ATSKP2;2,ATSYTB,ATTDT,ATTIM17-1,AtTLP2,ATTPC1,ATTPS10,ATTPS12,ATTPS13,ATTPS-CIN,ATVEX1,ATVPS33,ATVTI12,ATXTH17,ATXTH19,B5 #1,BAM6,BCAT4,BETA-UP,BGAL4,BGAL5,BGAL6,BGAL7,BGL1,BGLU47,BHLH071,BIP3,BMY5,BR6OX1,BRC1,BST1,BT1,BXL1,C,CAD5,CAM8,CAM9,CAN,CAT3,CAT8,CAX7,CBL6,CBL8,CCD8,CCH,CDI3,CER1,CHR42,CID11,CID5,CID6,CIPK11,CIPK17,CIPK20,CIPK22,CIPK25,CKX3,CLC-C,CLE2,CLE27,CLE6,CMT1,COBL5,COBL8,COBL9,COR414-TM1,CORI3,CP1,CPK16,CPK2,CPK25,CPK30,CUT1,CYCP3;2,CYCP4;1,CYCP4;3,CYP702A5,CYP705A1,CYP705A12,CYP705A2,CYP705A22,CYP705A23,CYP705A25,CYP705A3,CYP705A30,CYP705A32,CYP705A5,CYP707A1,CYP707A4,CYP708A1,CYP708A2,CYP710A1,CYP710A2,CYP710A4,CYP716A2,CYP718,CYP71A16,CYP71A19,CYP71A20,CYP71A22,CYP71A28,CYP71B13,CYP71B17,CYP71B22,CYP71B37,CYP71B4,CYP722A1,CYP72C1,CYP77A4,CYP77B1,CYP78A10,CYP78A6,CYP79F1,CYP79F2,CYP81D4,CYP81F3,CYP81F4,CYP82F1,CYP83A1,CYP86A1,CYP86B1,CYP89A9,CYP94B1,CYP94B2,CYP94D1,CYP96A1,CYP96A3,CYP96A4,CYP96A5,CYP96A9,DELTA-TIP,DER4,DFR,DIN11,DIN2,DOG1,DREB1A,DRM1,DRT100,DVL1,DVL11,DVL13,DVL19,DVL3,DVL8,DVL9,EDA18,EDA21,EDA4,EDA5,EDS5,EFE,EIL2,EIN2,ELC-LIKE,EMB1276,EMB3009,ENDO5,ERD1,ERD14,ERD5,ESP,ETO3,EXGT-A1,FAMT,FDH,FHL,FL3-27,FLA2,FLA6,FLS,FPS2,FRO8,FT,FUT4,FUT5,FUT6,GA1,GA20OX2,GAD,GAE4,GAI,GAMMA CAL2,GATL7,GDH1,GDH2,GGPS3,GGPS4,GGR,GH3.5,GH3.9,GL2,GL22,GL3,GLIP7,GLN1;4,GLP2A,GLP4,GLP9,GLR2,GLUC,GMD1,GNC,GORK,GPAT2,GPAT5,GPAT7,GRF11,GRP19,GSNAP,HAESA,HAT1,HAT2,HB-5,HB53,HEC1,HEC3,HFR1,HGO,HHP2,HIS1-3,HLH1,HMG1,HMT3,HO4,HR1,HSP18.2,HVA22F,IAA14,IAA19,IAA20,IAA29,IAA34,IAA6,ICK2,ICS2,ILR1,IMS2,IPD1,IQD12,IQD17,IRE,IRT2,IRT3,IRX9,J20,JAI3,JAZ3,JMT,JR1,KAN4,KIN2,KNAT7,KRP2,LAC1,LAC5,LAS1,LBD25,LBD28,LBD29,LCB2,LHCB2:4,LOX5,LRX2,LTP2,LTP6,M10,MAG1,MAM1,MAM3,MAM-L,MAPKKK13,MAPKKK15,MAPKKK17,MBP1,MBP2,MCCA,MDHAR,MEA,MEE15,MEE3,MEE64,MEE66,MGD2,MGP,MIF3,MIOX4,MIR398C,MIR408,MIR857a,MLO15,MLP28,MLP328,MLP34,MLP43,MMP,MRH2,MRH3,MRH4,MRH6,MRN,MT3,MTN3,MTPB1,MUB5,MUM2,MUR1,MVD1,MYB105,MYB106,MYB107,Myb14at,MYB2,MYB23,MYB29,MYB3,MYB34,MYB36,MYB39,MYB52,MYB54,MYB61,MYB62,MYB76,MYB99,NAC1,NAI1,NAM,NAMT1,NAP,NCED3,NCED4,NCED9,NHX2,NIC3,NIP6;1,NIP7;1,NLM1,NLM6,NLM8,NTMC2T1.2,NTMC2TYPE1.2,OBP4,OFP12,OFP13,OFP15,OFP16,OFP17,OFP9,ORA47,OST1,OZS1,P44,PAM1,PAP14,PAP16,PAP20,PAP24,PAP7,PAR1,PATL2,PBP1,PCC1,PCK2,PDC3,PDF1.2,PDR11,PDR2,PEPCK,PGAZAT,PGIP2,PGP17,PGP5,PGSIP3,PGSIP4,PGSIP5,PHOT1,PHYA,PIF4,PIN5,PIP1;5,PIP1A,PIP1C,PIP1D,PIP2;4,PIP2;6,PIP2E,PIP2F,PKS1,PKS2,PKS4,PLA IVA,PLA IVD,PLA V,PLDBETA2,PLP1,PLP4,PLP8,POP2,PPDK,PR-1-LIKE,PR4,PROPEP4,PROPEP5,PRP3,PRP4,PRX33,PRXCA,PRXR1,PSD2,PSP,PUP1,PUR ALPHA-1,PXMT1,PYK10,QRT1,QRT3,RALFL17,RAP2.11,RCD3,RD19,RD20,RHA1B,RIC1,ROC1,ROPGEF10,ROPGEF11,ROPGEF12,RSU1,RTFL10,RTFL18,RTFL2,RTFL21,RTFL3,RTFL7,RTFL8,RTFL9,SCPL1,SCPL11,SCPL12,SCPL16,SCPL2,SCPL22,SCPL23,SCPL28,SCPL3,SCPL40,SCPL5,SDP1,SEC14,SEN1,SGB1,SHV2,SIM,SKP2B,SLAC1,SLAH1,SLAH2,SMG1,SMT1,SMT3,SNRK2.5,SNRK2-5,SNRK2-6,SPL3,SPL4,SQP2,SRG3,SRK2E,SRK2H,SRO4,SS3,STP11,SUC2,SULTR1;1,SULTR3;2,SUM3,SUS1,SUS4,SVP,SYP112,SYP123,SYP31,SYTB,TAC1,TAT3,TCP18,TEL1,TET12,TGG1,THA1,TIFY6B,TIP2,TMT3,TPS12,TPS13,TRFL9,TUB1,TUB8,UBC16,UCC3,UF3GT,UGE1,UGE5,UGT72E3,UXS3,UXS5,VAC-INV,VAMP7C,VHA-E3,VIF1,VIT1,VLN2,VLN3,VND3,VPS2.3,VSP1,VSP2,VTI12,VTI1B,WAG1,WAG2,WAKL1,WAVE1,WES1,WIP2,WNK3,WOX14,WRKY24,WRKY28,WRKY35,WRKY56,WRKY69,WRKY8,XBAT32,XIA,XIF,XTH33,XTR4,XTR6,XTR7,YAB2,YLS2,YUC2,ZCW32,ZFP2,ZIFL2,ZIP1,ZIP7,ZW2,ZW9 RICHTER_GA1/COL-0II_DN Down-[ga1] vs [Col-0II] (Table S2 PubmedID:20844019) AT1G23350,AT4G04810,AT1G29050,ATGH9B15,NIC2,AT4G28040,AT2G11140,VAMP7C,AT1G19330,RPS15AD,AT5G05750,AT5G06330,AT4G14980,FLC,AT5G14130,CSA1,AT5G18600,AT5G22920,ZFP3,AT5G18850,TCH2,CYP71A16,AT5G63970,AT1G29430,AT5G55720,AT4G32270,AT2G27080,ATEXO70H7,AT-HSFB2A,AAP4,MAF4,GCL1,AT5G67000,BIGYIN,ATSBT4.12,AT2G07687,AT3G01750,MBP2,AT1G51440,MIF1,AT1G61310,RCI3,AT1G77210,AT3G52680,AT1G04380,AT5G63350,AT4G40040,AT1G34040,AT1G75380,LAC1,AT1G33600,TAT3,AT1G63350,ATEM6,STP1,AT2G39850,AT2G26480,AT2G42270,AT1G07690,CYP705A6,AT2G01090,AT2G37360,ARR11,AT3G03270,AHG3,AT3G07070,JAI3,AT2G21100,ATBZIP42,AT3G20380,GL1,CYP94D1,AT3G25600,AT3G32030,AtRABA4d,AT3G45070,ATPPA4,AT3G16740,ATL4,ARF18,AT3G62950,AT4G00700,AT4G11190,AT4G18550,ATAAH,AT4G30450,AT4G35150,AT4G15260,AGP12,AT5G07110,AT5G16370,AT5G17890,ATGLR2.1,AT5G43520,AT5G37970,MYB23,AT5G18130,MRN,AT5G46940,AT1G29500,AT5G50260,AT5G59220,AT5G61290,AT1G52390,AT5G14860,SP1L4,AT3G05980,AT4G08110,AT5G49830,AT1G20470,AT1G17750,AT1G51200,AT1G62500,AT1G23110,(AT)SRC2,AT1G05340,AT1G10160,AT1G14220,ICS2,AT1G63600,AT1G49960,AT1G66400,AT1G27740,AT1G48690,AT1G67870,ATGSTU28,AT3G06750,AT1G69545,AT1G58150,AT1G31490,AT2G30550,AT2G25820,AT2G40460,ATEXPA8,AtTLP2,P5CS1,AT4G17970,AT2G39400,AT2G18980,AT2G27440,SPL3,AT3G10340,AT2G26030,AT4G02270,PLDP2,AT3G04210,RCI2B,LOX5,ATNAC3,AT3G21800,AT1G29800,RALFL33,AT3G03520,AT3G11110,AT3G44630,MLO3,ATEXLA1,AT3G47420,VRN2,AT3G48970,AT3G50120,AT2G46220,ATEXPA16,AT3G59710,AT4G00720,AT4G01110,AT4G03030,SULTR1;1,AT1G06100,AT4G09420,AT4G11210,AT4G13860,AT4G19380,NDB3,AT1G29090,AT4G23590,AT4G24480,AT4G26540,AT5G48490,AT4G35160,MI-1-P SYNTHASE,CIPK4,AT2G45600,AT4G37220,AT2G44230,AT5G06720,GDH2,AT5G08250,AT5G09700,CYP86B1,AT5G24410,TGG2,CYP716A1,AT1G68600,AT5G37980,PATL1,AT5G47000,AT1G57980,BGAL4,PIP2;4,AT5G62040,AT1G52330,AT1G56710,AT1G62510,ATMGL,AT1G05330,AT1G75620,AT-E1 ALPHA,ATPME2,AT5G24680,AT1G14960,AT1G32900,ATGH9C1,AT1G53340,HMG1,ATVTI12,AT1G68110,BETA-TIP,AT1G13420,AT1G71740,AT1G58160,MYB54,AT2G30540,CYP702A5,AT2G32660,AT4G21830,AT2G44500,AT3G10020,APRR9,AT3G25570,AT3G27440,AT3G44710,ATMLP-300B,AT1G31750,AT3G29630,SULTR3;1,AT1G02660,RPP13,AT3G46700,AT3G49930,AT3G50130,AT3G50560,AT3G55770,AT3G55970,AT3G56360,ATGSTF13,ANL2,AT4G04630,AT4G20480,AT4G10500,HAK5,AT3G48080,AT4G19810,AT4G20860,AT4G25790,ANAC074,SCPL44,AT3G02700,AT4G16940,AT3G23085,AT3G04360,AT2G37750,AT5G19110,AT5G20790,AT5G24100,AT5G24420,ATBZIP9,TGG1,AT5G26200,AT5G36130,AT5G37990,AT5G41800,COBL9,AT5G52050,AT5G53190,AT5G54020,AT5G58010,AT5G65100,AT3G29970,AT5G66330,MAPKKK19,AT5G56370,MGD2,AT5G04120,AT2G20670,CMT1,AT5G58780,WRKY40,AT1G09910,AT5G39160,AT1G57790,AT1G21680,RPK1,CYP705A27,AT4G16563,IAA6,AT1G66090,E12A11,ZW9,ATTIM17-1,AT1G51140,MGDC,AT2G03850,AT2G05660,ANNAT3,AT2G25150,JMT,MLO15,AT2G39420,AT2G32150,AT2G22930,AT2G47050,AT2G33830,AT3G05860,AT3G07800,AT1G26450,AT3G21600,AT3G23470,AT3G26480,AT1G44920,UGT72E3,BME3,AT3G55980,AT3G59350,AT3G60490,AT4G01130,PGP5,AOP2,ATTPC1,AT1G23340,AT5G35798,AT1G72800,NLM1,AT4G22050,AT4G26770,GH3.5,AT4G29450,AGL21,ATCSLB05,AT5G45490,PDC3,AT5G09520,ATGLR2.5,AT1G49780,AT5G19120,AT5G27140,CYP716A2,AT5G44440,AT5G44920,AtMYB72,AT5G50300,MYB99,AT1G19400,AT4G30410,AT1G76250,AT5G18050,AT5G09480,VSP2,AT5G35914,AT1G51880,AT2G46300,AT3G17100,AT1G61280,AMC6,ARR3,AT5G08480,AT1G31440,ATERF-8,NAP,ETC1,AT1G70680,ATOCT1,ATTPS6,AT2G41970,AT2G16990,AT4G17250,AGL17,ATGH9B8,BAS1,XERICO,AT2G39040,AT3G29370,ATCSLB02,AT2G39430,ATHB20,AT3G50840,IAA19,PAD3,AT1G13130,ASK10,NCED3,AT1G78020,AT3G47620,AT3G49960,ATPAP20,AT1G23850,AT3G56200,UCC3,AT5G18020,AT1G05835,AT1G71960,ATGH9C3,AT4G22610,PIP1;5,AT4G30140,AT4G33720,XTR7,AT4G16750,AT5G02460,AT5G09530,SQP2,AT2G34170,ATPEN3,AT5G38020,AT2G44260,ATCLC-A,AT1G72230,AT5G43030,KAT1,AT5G47950,PAT1,AT1G64370,AT5G51890,SEN2,KEA1,AT5G61660,AT5G62340,EIL2,AT1G70690,MARD1,AT3G24982,AT2G36410,AT1G24130,AT1G61470,AT5G46950,AT1G60260,ATGOLS7,ATMC6,AT1G04330,AT2G14910,ATOCT3,GRF11,ATDI19,AT1G66760,AT1G20120,AT1G74460,AT5G18030,AT1G66100,ATMLO9,AT3G18560,ZF14,AT4G16980,AT1G57570,ECS1,AT1G73340,AT2G40000,GH3.1,AT1G74280,SCPL23,AT2G28670,AT2G28440,MEE3,CYP82F1,AT1G07750,38598,NIC3,HIS1-3,PIP1B,AT2G25980,AT4G02860,AT1G76590,RCI2A,AT3G02620,AT3G16690,WAG2,AT3G19390,IQD17,AT4G17280,RPP1,ETO3,AT3G51680,ATTPS-CIN,ATARFA1E,GAE3,AT3G47210,ATPP2-A1,XTR6,AT4G27280,AT4G27450,AT4G10370,AT4G29030,AT2G31940,AT4G33730,AT4G16960,AT5G46490,AT5G04960,AT3G26510,AT1G31290,AT5G10770,TGG3,AT5G26920,AT2G02690,AT5G42180,AT5G43040,AT5G46520,AtTIP2;3,AT4G38080,AT2G29660,AT5G49850,AT1G64300,AT5G40190,AT1G01750,AT1G19530,AT14A,ATVEX1,CYP94B1,AT5G64110,AT5G66170,BHLH101,AT1G35612,AT3G42155,AT1G62540,AT1G52100,AT1G64590,AT1G23130,AT4G37850,AT1G10140,AT1G12070,ATMC7,AT1G16260,AT4G12690,AT1G11050,AT1G69240,AT1G70460,AT1G52190,AT4G18580,AT1G49230,ATPUP20,ATDR4,AT2G43610,AT3G48400,MSS3,AT1G67600,EMB2731,AT2G34840,BLH5,AT3G13720,AT5G28920,AT2G11150,AT3G15760,HLH1,AT3G07010,ATGSL04,CIPK7,AT3G22600,AT1G34510,AT3G14770,FAD2,AT3G45410,AT4G39900,ATMPK3,AT3G52790,AT3G53510,AT5G08240,AT4G04460,AT4G13900,AT4G18680,AT4G19490,AT1G03700,AT4G23200,AT4G24340,AT5G17350,AT4G26790,AT4G29700,CYP83B1,AT3G50640,YDK1,AT5G02600,MET2,ATHB-2,DELTA-TIP2,SYP23,AT5G01200,AT5G03640,ATEXPA2,ANN7,AT3G48450,ATEXO70C2,ATCEL5,EMB3009,ATPUP14,AT5G25280,AT5G26250,AT5G38030,AT5G43740,AT5G46530,AT5G47800,AT5G47980,BXL1,TPX2,AT3G45730,XTR3,AT5G59650,AT5G63190,CYP89A5,GCL2,PDF1.5,AT3G49580,AT5G04330,AGP3,AT1G20823,HFR1,AT1G30870,THA1,CLE7,ZFP1,FT,CP5,AT1G31820,AtMYB93,AT1G30500,AT1G21400,ATMYB103,AT1G52750,AT1G19510,AT1G33470,AT1G79250,AT1G67860,AT1G48870,AT1G58410,AT1G44180,AT2G19810,AT5G48850,AT2G34080,FLA6,AT5G06930,ANR1,AT2G18690,SCPL11,AtM1,WRKY33,AT2G34210,AT5G49350,CYP710A1,AT2G25450,AT5G55690,AT2G44290,ATL2,RSH2,AT3G26610,CYP705A22,CYP705A30,AT5G16110,AT3G44260,AT4G31290,ATTPS9,ADPG1,AT4G00880,AT4G01890,ATOPT7,KCO6,AT4G19500,AT4G22460,AGL19,AT4G25010,AT4G25220,AT1G17310,AT4G27290,AT4G29050,AT4G29710,CYP81F3,AT3G19515,CYP705A1,CYP71B20,AT5G22410,TET12,AT5G43440,AT5G45430,MLP34,AT4G13800,AT1G29610,AT3G11230,TCH4,CYP86A1,BHLH100,AT5G62360,AT2G28305,AT5G67400,AT5G20450,AT5G21170,ATGOLS2,C2H2,AT2G07718,ZFP7,AT1G35625,FRO2,HR4,AT1G30990,AT1G62570,AT1G23140,AT5G55970,WAKL5,ATL8,ATSEC1A,AT1G55450,AT2G16380,CYP71A25,AT2G43860,AT2G46140,ATEXPB1,SRG3,AT5G37690,AR781,BAM6,AT2G01430,ATC,AT2G18890,AT2G45800,AT3G03840,AT3G05150,ATMDAR3,AGP13,MYB108,AT3G13270,AT1G69550,CYP71B37,ANAC060,AT3G45430,AT3G01720,AT3G51710,AT3G56060,MTPA1,PRP3,AT5G18140,GAMMA-TIP3,AT4G09200,AT4G10780,AT5G50560,AT3G57400,IRT2,AAT1,AT3G11690,AT4G24570,AT4G28160,AT5G03200,AT4G30370,CYP81F4,TET10,SQD2,AT5G02780,JKD,CYP77A4,AT5G05890,IQD12,DRM1,AT5G24510,SCPL41,AT5G44980,CIPK20,AT2G22510,CYP705A5,CLE6,AT4G02940,AT5G67430,AT5G28630,AT3G06390,AT1G24480,ATPRP1,ATMLO7,AT1G35250,AT1G35330,AT1G62760,AT1G24420,AT1G23000,AT1G30850,AT1G10560,ATTPS12,AT2G19660,SHM7,ORA47,SCPL5,MYB51,AT1G19190,AT1G43140,AT3G06780,AT4G03960,AT1G64020,AT2G40970,AT2G18370,AT2G32860,ATPMEPCRD,CYP705A13,CYP718,AT2G17650,ATPAP7,AT2G44910,AT5G51790,AT3G07600,AT3G01550,CYP78A8,AT1G53690,AT1G53100,AT3G09930,AT5G24760,AT3G18200,ATMYB5,AT3G16670,AT3G44540,AT3G45860,AT3G46600,ASN1,AT2G04380,AT5G42965,AT1G73790,AT5G66650,AT5G56910,AT4G33666,AT3G61160,CYP702A6,AT1G12160,AT4G02160,AT5G49690,AT4G05200,AT4G11310,ATTPS13,AT4G27310,AT4G28850,AT1G43800,AT1G15010,ATEXLB1,HAT1,SQS2,AT5G05090,AT5G10250,CYP710A4,ROXY2,AT5G18010,ATFRO4,AT2G40530,AT5G33370,CYP708A1,AT5G46040,AT1G29450,CYP708A2,AtMYB19,AT5G02550,AT5G63270,AOX2,AT5G67180,AT5G19880,AT5G09210,AT2G17880,LBD16,AT3G10930,AT1G23830,AT1G52140,AT3G49790,PPCK1,NIP6;1,AT1G80960,AT1G09370,AT5G38200,AT1G04180,AT1G03020,ATGSTU16,AT1G14160,AT1G76190,NCED9,AT2G36100,AT1G74670,AT2G14060,AT1G18530,AT5G56380,AT2G05540,ATPEN1,PIP2B,AT5G42850,AT2G23540,AT2G18470,AT3G24020,ATPAP1,TUB8,AT2G28990,MYB106,AT3G05950,AT3G16220,AtMYB10,AT3G13660,SUS4,AT3G29575,AT3G49340,DIN11,AT3G50400,AT3G51110,AT3G28840,AT3G55890,AT3G61210,CP12-2,ATL5,AT4G01910,AT4G02170,AT4G11320,MYB105,CYP71A20,AT4G20210,AT4G22490,AT1G32450,PGSIP3,AT4G34930,AT4G35750,CIPK17,AT4G38690,AT3G48340,AT4G16620,AT5G01240,AT2G05830,AT3G11370,AT5G17820,AT5G18350,ECT5,BR6OX1,UBC8,AT5G42500,RPP8,DOG1,AT5G48010,AT1G29660,AT2G34510,AT5G55050,ATPUP18,AT5G59530,AT5G61440,AT5G65530,AT5G67190,AT5G20860,AAP2,NAMT1,AT2G31540,CER1,AT2G14080,AGL12,AT1G71400,AT1G15890,ATGPAT2,AGP4,AT1G61590,AT1G08670,AGL79,AT1G08900,AT1G09380,AT1G65190,ATAMT1;2,AT1G16440,AT1G53270,AT1G73780,AT1G77520,AT1G60970,AT1G48820,MYB122,AT1G66130,WOX14,AT2G32870,PHI-1,AT2G19960,AT1G64210,AT5G42460,AMS,AT2G21820,AT2G36770,AT2G19150,AT2G38100,AT1G80240,AT5G41620,ATACP5,AT5G05500,AT3G29670,AZF2,AT3G28200,SCPL16,AT3G45680,AT3G46490,AT2G02620,ATXTH18,AT2G45930,EDS5,AT3G59260,AT5G44316,AT3G63330,AT4G01920,AT1G56320,ATSPS4F,AT4G13580,AT4G13790,AT4G20230,ATGA2OX8,AT4G21650,AT1G44020,AT4G28240,GGPS3,PLA IVD,BT5,CYP705A4,AT4G16640,ATPAP25,GRP17,AT1G31310,AT5G17850,CIPK25,AT5G36270,GORK,AT5G42510,AT5G48620,AT1G29600,AT5G43175,AT1G69890,AT5G38930,AT2G47270,AT1G33080,AT5G55910,BGL1,AT3G04350,AT2G15960,PGSIP4,AT5G38350,AT3G22570,AT4G05070,PIP1C,AT1G23710,AT1G51360,AT1G60630,AT1G23060,AT1G71970,ATTPS8,SUC2,AT1G65450,AT1G14185,AT1G15380,AT1G79700,AT1G50090,AT1G77530,AT1G48800,ATCNGC8,AT1G06830,MLP329,XTR4,AT1G65295,AT2G01400,AT2G35380,AT3G04640,ATPP2-B8,CYP79B3,SNG1,AT4G15120,LAC5,VIT1,ATL6,CYP89A9,RGP3,AT3G11930,AT3G29250,SCPL48,AT3G46650,ATATH3,AT3G48390,AGL34,LBD26,AT3G55700,AT3G56930,HAT3,AT4G04570,AT1G05990,CYP706A7,AT4G13810,AT2G21080,ATM4,AT4G22520,FWA,AT4G16000,GPAT8,PIP3,SEN1,AT4G15390,AT4G16880,AT5G01740,AT5G10120,AT1G68670,AtMYB40,AT5G15180,AT2G38790,CAX7,CYP714A2,AT5G41740,AT2G38480,AT5G47640,AT4G00780,WOX2,AT5G59550,AT2G39050,AT5G66260,AT5G20150,AT5G20740,AT1G33770,AT1G62450,2A6,MMP,AT1G10000,AT3G30350,AT1G30750,ATGSTU26,AT1G72890,AT1G67050,AT1G14890,AT1G18880,BT1,AT1G27670,RAV2,AT2G25070,AT1G63450,PGAZAT,MEE15,SCPL43,ATGPAT3,ATPP2-B10,SVP,AT3G09160,AT5G56490,AT4G26530,ATPLC2,AT3G45700,AT3G53960,AT3G54140,AT3G59480,AT3G61810,AT4G01350,AT4G01760,AT4G10150,AT4G20040,AT4G21010,AT1G29100,AT4G22810,ACBP3,ATPAP24,AT4G25300,AT4G28940,AT1G43790,ATGSTU14,AT4G39770,AT4G15400,SNC1,CP1,LCL1,NHL3,AT5G13580,AT1G49570,YSL2,CYP714A1,AT1G68620,AT5G37540,AT5G42280,CYP705A12,SUPER1,ATPP2-A8,AT5G48370,HKT1,AT2G44770,AT5G50950,PSD2,AT5G58770,AT1G55240,AT5G64260,ACS5,RAP2.11,AT1G03610,AT1G03400,AT1G27290,AT1G12010,AT1G22690,AT3G62725,SCPL4,RPS5,AT1G76800,AT1G13430,AT2G03200,AT2G16980,AT2G47520,AT2G20550,SCPL1,ATGRP2B,AT5G50565,YLS9,ATTPS11,AT5G51670,AT3G05990,AT3G16120,DELTA-TIP,AT5G24660,DELTA-VPE,AT3G19620,AT3G44610,AT3G48740,AT5G52070,AT3G53250,AT3G59010,AT4G00680,AT5G23830,AT5G44260,AT4G02090,AT3G28140,AT3G02690,AT2G25460,AT5G07475,AT2G27370,AT5G58570,AT5G12270,AT2G39435,AT2G48130,AT3G60480,AT3G28650,CLE19,ATEXPA7,ATMC3,AT4G23870,AT5G17190,RPP4,AT2G42380,ARK2,AT1G19660,LBD32,AT2G04500,AT4G17840,AT3G18930,SMAP1,AT2G26975,ATPAP16,AT3G28130,AT5G22430,AT4G17215,AT1G08310,AT1G58280,AT4G05040,AT4G28085,AT1G47655,AT5G46890,ATEXO70H2,AT3G22250,AT1G15180,MT3,AT2G01300,AT2G35710,AT4G30670,AT4G33910,AT2G17590,AT2G47200,AT5G02990,AT1G35430,AT2G04680,AT2G45180,AT5G19070,AT5G18080,AT5G44550,CLE13,AT3G20570,AGP14,AT3G44510,SPL8,AT2G43540,ORG1,AT1G05250,AT2G24870,AT2G39570,AT3G50800,AT3G07350,AT4G01140,AT1G78070,AT5G43150,AT1G28710,MLP328,AT5G05250,AT2G33850,AT4G15610,SCPL2,AT2G17850,AT5G19410,CYP707A1,AT5G38940,AT5G45500,ATPP2-A13,AT2G44130,AT3G47710,AT3G49570,MEE14,AT1G61840,AT1G19020,AT1G68945,NPH4,AT4G02210,COR414-TM1,AT3G23550,AGP26,AT4G01220,38596,AT2G05510,AT3G49810,AT3G52360,AT3G07870,AT5G57625,AT4G13630,BHLH038,ATAGAL2,AT1G34200,AT3G15450,AT1G33475,ATXTH17,AT5G25840,AT3G52060,AT5G15500,AT1G08500,AT4G15010,AT5G14690,AT5G46510,EMB1879,AT1G74450,AT1G80120,AT3G18950,AGP22,AT4G19515,AT5G23460,AT4G20390,AT3G44430,AT3G60940,AT2G37120,AT5G10695,AT1G51630,ACS11,AT4G30993,AT4G09310,AT5G01320,AT5G14150,AT-HSFA6A,AT5G38980,AT5G11070,AT2G16530,ATGPAT5,AT2G17705,AT3G16410,AT5G26270,AT3G55240,TET8,AT2G27402,AT2G40925,UGE5,AT3G01940,ATPGLP2,AT3G15440,AT4G11200,AT5G24170,AT5G07770,AT1G63130,AT4G04925,AT5G42785,AT1G07795,AT2G40113,AT3G22620,AT5G60650,AT5G49080,AT1G60050,AT1G61480,AT1G75000,AT4G16745,AT5G25415,AT1G65280,AT5G24313,AT1G53785,AT5G62330,ATEXO70G2,AT2G16005,AT4G11780,AT2G33340,AT1G55675,AGP2,AT2G45940,AT1G06930,AT2G04480,AT2G06025,AT1G33055,AT5G10310,AT2G39415,AT3G19550,DVL6,AT3G29140,HR1,ATOFP11,AT5G51730,AT5G44005,AT5G46250,AT1G24580,ATROPGEF11,AT2G19200,AT2G25260,PIL1,AT4G22510,AT5G14110,IAA33,AT2G24040,AT4G20095,FRL2,AT4G12545,AT5G37320,AT5G42410,AT5G46960,TPD1,AT4G39675,AT1G25240,AT1G58235,AT1G63055,AT2G17300,AT3G05937,AT3G03870,FHL,AT3G54500,AT4G14650,AT3G16750,AT3G20340,AT3G28960,AT3G61010,AT5G60130,AT3G09340,AT1G67865,AT2G37210,AT5G66815,AT1G33340,AT1G22160,AT3G48020,SADHU1-2,AT1G56270,DIR1,AT1G27385,AT1G76220,AT2G22905,AT2G13960,ATPUP5,AT2G35990,AT3G11550,AT3G14595,AT1G12805,AT4G14830,AT1G49500,AT2G47360,RPP5,MIR156C,AT1G65510,AT1G76530,AT2G25735,AT5G15900,AT5G42825,AT1G11690,AT3G44713,AT4G22214,AT5G23750,AT2G21720,AT1G47400,AT4G32860,AT5G38700,LBD28,AT4G39795,AT5G40180,AT2G21990,AT3G61930,AT5G64780,AT1G76610,AT4G07825,AT3G22070,GL3,AT2G45403,AT4G03480,AT1G12030,AT2G05400,AT2G31945,AT4G22160,AT3G28600,AT5G38100,AT1G60190,AT2G18210,AT4G00955,AT1G28260,ACT8,AT5G42655,AT1G47570,AT3G01345,AT4G00130,AT5G46090,AT2G33855,CDKB1;2,ANAC097,AT5G60140,AT1G24145,SLAH1,AT2G36650,IAA29,AT4G22212,AT5G03545,AT2G38995,AT4G12200,AT3G56880,AT5G65207,AT1G11655,AT1G31990,AT1G51430,AT2G18270,DVL13,AT2G45130,AT4G15990,AT1G35183,AT1G53885,DVL11,AT3G42800,AT5G02000,AT2G18590,AT2G19920,AT4G29905,AT5G45095,AT4G05150,AT3G13980,AT5G42930,AT1G19397,ZCW32,AT2G43390,AT1G29000,AT1G30250,AT1G61160,AT3G16520,AT5G21020,AT5G40900,AT1G08300,AT2G14247,AT2G42900,AT1G73000,AT5G41080,AT5G55896,AT2G40920,AT3G29330,AT2G05370,AT2G20080,AT2G31930,AT4G28840,AT5G54530,LCR85,AT2G27385,AT1G62620,AT2G23970,ZW2,AT2G38500,AT4G02540,AT1G78990,AT2G27035,AT2G35200,AT3G10815,AT4G28703,AT5G03310,AT3G28310,AT3G43110,AT3G47200,AT5G43540,AT5G09780,AT2G31985,AT2G02960,AT4G14305,AT1G19394,AT2G34350,AT3G06160,AT2G32200,AT2G37950,AT4G16515,AT5G64190,AT2G06005,AT3G04370,AT3G13435,TAS3,BHLH039,AT5G48510,AT4G22120,AT4G33310,AT4G37860,HEC3,AT2G17580,AT2G37700,AT2G45610,AT2G46670,AT3G11000,AT3G16370,AT4G35690,AT5G05965,AT5G26230,AT5G52330,AT3G55720,ASL16,AT2G20500,AT4G28088,AT2G15420,AT4G06536,AT1G60740,AT5G25970,AT2G39855,PCC1,AT1G56500,IPS1,AT5G21950,AT2G34330,AT3G15250,AT4G36830,SEC14,AT3G61840,AT5G36930,AT1G09995,AT3G13275,AT4G19920,AT3G47675,AT4G05631,AT2G26695,CCD8,ATMTP11,AT3G23480,AT4G01390,AT4G31110,ATNUDT24,AT3G06150,AT4G28890,AT5G35110,AT1G49330,CYP96A14P,AT2G17660,AT2G46740,AT3G15240,AT3G28550,AGP24,AT5G47635,AT5G55790,ATPP2-B14,AT4G32480,HMGB3,AT1G26360,AT1G45165,AT1G66110,AT2G01580,AT2G04170,AT5G13900,AT1G80520,AT2G25130,AT2G26370,AT3G60700,EDA4,AT3G25240,AT4G01915,AT4G11211,AT4G22640,AT1G07135,CYP72A11,AT3G19320,AT4G33960,AT5G06470,AT2G17550,AT3G06145,AT5G01075,ATROPGEF10,AT5G23700,AT1G45015,AT2G34315,AT3G07425,AT4G34550,ATPAP14,AT5G65300,AT3G01960,AT3G51325,AT4G02850,AT5G22860,AT5G38320,ANAC099,RIC1,AT2G25510,AT5G52790,AT1G55990,ATROPGEF12,AT2G04800,AT3G47965,AT1G42580,AT4G22217,AT5G25010,AT1G67460,AT1G12400,AT2G25200,AT2G43670,AT3G02030,AT5G21130,AT5G20045,AT1G10385,AML5,AT2G37440,AT1G02570,AT4G35210,AT5G46060,AT5G40500,AT5G45350,CYP71A24,AT5G06530,AT1G29720,CYP82C4,UBC28,AT4G18200,AT3G14530,AT1G64360,AT1G25400,AT3G02670,AT5G41820,AT4G34150,AT4G21840,AT1G56510,DVL19,AT2G43920,AT1G31935,AT3G48115,RIC4,AT1G69252,AT3G27906,AT5G63130,AT2G14285,AT1G01453,AT2G07786,AT1G11175,AT3G60965,AT4G37620,AT3G12502,AT3G06125,PIFI,AT3G50845,AT2G14115,AT2G04378,AT5G53160,AT1G19968,SLAH4,AT1G66173,AT1G08165,AT3G52748,AT5G06865,AT4G36500,AT1G77525,UPL4,AT2G27830,AT2G16050,AT1G53030,AT5G07571,AT5G16486,ZIP8,AT5G15290,AT1G31900,AT1G70885,AT1G53870,AT1G59218,AT1G24996,AT1G80970,AT1G05220,ATUGT85A5,AT1G47565,AT1G52905,AT1G40143,AT1G11803,AT1G12080,ARF20,AT1G15400,AT1G20130,BZR1,AT1G51802,AT1G43020,AT1G69587,AT1G76952,AT1G53163,DVL3,SADHU2-1,AT1G52347,AT1G78265,AT1G20515,AT1G58590,AT1G74458,AT1G15885,AT1G24577,MLP28,AT1G22885,AT1G16905,AT1G67148,AT1G67365,AT1G11684,AT1G52342,AT1G25209,AT1G11112,AT1G24148,AT1G49032,AT1G17147,AT1G63057,CLE26,AT1G61093,AT2G21185,AT2G07530,AT2G29010,AT2G44195,AT2G34760,AT2G22150,AT2G01340,AT2G27395,SADHU1-1,AT2G09800,AT2G27420,AT2G07712,AT2G36220,AT2G07777,AT2G07699,AT2G22335,AT2G32885,AT2G24755,AT2G09795,AT2G13665,AT2G31585,AT2G44798,AT2G21188,AT2G13431,AT2G42485,AT2G15128,AT2G26355,AT2G36261,AT2G36881,AT2G19146,AT2G10931,AT2G39782,AT2G30766,AT3G29798,AT3G16390,AT3G13062,AT3G60150,AT3G46385,AT3G03700,AT3G61410,AT3G32047,AT3G31415,AT3G31425,AT3G46270,AT3G07920,AT3G53010,SRO4,AT3G03855,AT3G06437,AT3G06433,AT3G56275,IAA7,AT3G52720,AT3G44326,AT3G05727,DVL2,AT3G21460,SADHU3-2,AT3G52535,AT3G54625,AT3G27884,AT3G61118,AT3G20395,AT3G26934,AT3G13277,AT3G26742,AT3G29252,AT3G10986,AT3G13061,AT4G22545,AT4G14610,AT4G19510,RGXT1,AT4G12520,AT4G14385,AT4G09480,AIR1,AT4G20240,UNE11,AT4G04692,IRT1,AT4G14819,AT4G22666,AT4G16162,AT4G22485,AT4G22505,AT4G22517,AT4G33467,AT4G26255,AT4G12917,AT4G04223,AT4G20362,AT4G20320,AT4G21745,AT4G07408,AT4G14548,AT4G16008,AT4G07812,AT4G37409,AT4G34881,AT4G25190,AT5G58340,GLP2A,AT5G36275,HSC70-1,AT5G57770,AT5G63020,AT5G41380,AT5G56747,AT5G56830,ATGDU5,AT5G27250,AT5G28440,AT5G37940,U3D,AT5G58810,AT5G46871,AT5G18407,AT5G38005,AT5G43725,AT5G50562,AT5G06278,AT5G28919,AT5G26146,AT5G53048,AT5G66052,AT1G72430,VSP1,AT3G44380,AT4G19160,AT3G43720,AT5G56980,AT5G39580,AT1G32920,AT3G49750,AT5G24735,AT5G64880,AT1G23390,AT3G03150,TT16,ATMAP70-5,EDA5,AT2G32690,AT2G22750,AT2G04110,AT5G60260,AT4G15960,AGP16,AT5G38000,BRD4,AT1G06980,AT1G51030,AT3G23460,AT4G03380,AT1G28700,AT1G52650,EDA21,AT1G15175,AT2G22960,AT4G35200,AT5G26620,AT5G16360,AT5G19860,NCED4,CAD1,AT4G27460,AT4G28300,AT3G15000,AT5G65220,AT3G03070,AT1G48970,TIP2,RTFL9,AT1G21510,AT1G76460,AT4G38470,AT3G62590,AT3G61020,AT2G07702,RTV1,AT1G58807,SAG20,LHB1B1,UBQ10,AT5G48930,PIP1A,RPL12-A,AT3G22970,ATPT1,AT1G63530,ELP,CCL,AT5G42200,AT3G32980,GAMMA-TIP,PSBO-2,PRXR1,UBQ3,TMP-C,AT5G54940,BT2,AT3G17770,AT4G40030,ATMLP-470,AT1G80160,AT3G22235,AT3G51730,AT5G66390,EFE,AT5G02160,AT3G15630,AT5G39130,RPT2,AT3G19380,AT1G69690,FLA7,AT4G19200,AT2G43060,ATGSTU13,AT3G10420,AT5G64100,AT2G17500,AT5G46900,AT1G73010,MYB3,AT2G36895,PIL6,AT4G38520,AT1G58602,AT1G75220,AT2G25625,ATERF6,AT5G07580,AT3G24927,AT5G02020,AT1G02890,HHP2,KNAT7,ATG8C,AT5G44060,AT4G12510,AT5G57070,AT1G79910,AT1G68450,ATEXLA3,AT4G33610,AT4G28150,AT5G46260,LBD18,AT1G63860,AT4G00440,WRKY56,ATTKL,AT5G07600,AT5G24350,AT1G74830,AT5G26180,NFD4,AT5G06630,AT1G26800,SCPL12,AT1G50970,PROPEP2,AT4G00160,AT2G44470,AT2G22180,AT3G55090,AT4G25410,AT1G23660,AT2G02680,AT4G24180,AT1G23620,CW9,AT1G18460,AT1G43650,AT3G46250,AT3G12540,AT3G20935,AT4G09260,AT5G23410,AT1G22800,AT1G29490,ACD6,AT2G20950,AT1G70900,AT5G24930,AT5G20580,AT5G53050,AT2G13660,SCPL25,GAMMA-VPE,LCR68,AT1G74770,CA1,PCL1,LHCB3,AT5G58950,AT4G13840,AT5G45510,AT1G35320,ATAF1,AT4G17790,EXGT-A1,AT5G37790,PIP2A,PIP2;6,AT2G03550,ERD7,AT1G64890,UBQ7,LPAT5,ATBZIP53,AT1G20680,SAM1,AT5G43760,ATPP2-A11,AT2G19610,AT3G27420,AT5G44417,AT4G15760,AGL42,AT1G21326,AT3G59370,AT3G25290,AT3G55900,AT5G18490,AT2G16760,AT4G37700,AT1G13650,AT2G02630,RRA1,AT4G02410,AT3G06890,AT5G06980,AT5G18060,AT4G00910,FUT5,AT3G25790,AT1G19900,CLE2,AT3G25010,GEA6,ATPP2CA,JAZ3,SRC2,PIP2F,VTI12,BZO2H2,MRH4,BME3-ZF,WES1,MYB72,ATMC5,ATERF8,CYP734A1,PAP20,PIP1D,MLO9,PAR1,TIP2;2,ANNAT7,ATGH9B4,AtMYB101,BMY5,MDHAR,TIP1;3,MLO7,TPS12,PAP7,TPS13,FRO4,GPAT2,XTH18,PLP8,PAP25,ATMYB102,GPAT3,PAP24,YUCCA5,PAP16,ATAGP26,ORG2,ATAGP22,GPAT5,ATPK5,RTFL16,ROPGEF11,RTFL2,RTFL8,TASIR-ARF,ORG3,LBD29,MTP11,ROPGEF10,PAP14,MEE64,RTFL10,RTFL21,RTFL19,ATPUP7,ATPUP8,PSBO2,TKL,PDF2.3,PIP2E,TIFY6B,VTI1B,SHV2,ATMCP2B,MYB101,PGLP2,ROPGEF12,PEX17 RICHTER_PIF1345/COL-0II_UP Up-[pif1345] vs [Col-0II] (Table S2 PubmedID:20844019) ANAC071,AT4G19330,AT1G27020,AT4G21020,AT1G07050,AT4G11540,AT2G09990,AT4G37480,AT1G43895,AT5G10880,AT5G25400,SnRK1.3,AT5G40310,SUS2,AT4G12500,AT5G59390,AT5G61470,AT1G17545,ATPIPK11,AT1G24230,AT1G55650,AT2G43830,AT2G28220,AT2G04720,AT5G44470,AT3G21040,PGP16,AT3G42160,ANAC061,AT3G53820,AT4G11890,AT4G23310,ATSBT3.18,AT4G29620,AT5G37170,AT5G38160,AT5G61610,AT5G63070,AT1G47980,AT1G17615,AT1G43940,AGL56,AT1G53480,AT1G69860,AT1G18050,AGL61,AT1G73325,AT2G38900,AT2G02650,AT3G03410,AT3G17500,AT1G12870,AT3G27970,AT3G21370,AT1G34560,PGA4,AT3G44170,AT1G24000,AT3G56350,AT3G57620,AT1G10890,AT4G05310,ATCSLA15,AT5G45775,AT3G56180,AT5G31884,ATS1,CRU3,ATOEP16-2,ATDTX1,ATFD4,ATGLR2.6,AT5G17200,AT5G18880,CYP71A15,AT1G72290,AT5G47670,AT5G48700,AT1G29680,GAMT2,AT1G47800,AT5G61620,AT4G05620,AT5G58310,GLIP4,AT1G51240,AT1G03890,CYP86C1,AT1G58120,AT1G47540,BETA-TIP,AT1G32250,AT2G34320,ATVAMP712,ATGA2OX3,AT3G05960,AT3G21980,PGP18,AT3G21380,AT3G42830,ASK13,DUO1,AT3G63160,AOP3,CRK5,CORI3,OLEO1,AT4G34440,LHT7,AT4G36700,DIF1,AT5G46670,AT5G09470,AT4G32340,CRU2,AT1G30560,HDG10,AT1G68040,AT1G17800,AT1G79130,AT1G43570,CYP96A15,AT1G35380,AT1G17610,AT1G64130,NDB4,CYP76C3,AT2G30090,AT2G37730,AT2G14570,CYP704A1,AT3G03400,AT3G06560,GASA1,AT1G26350,AT3G16970,RPL12-B,AT3G29070,TIP5;1,AT1G30922,PDF1.2,SCPL36,AT3G61400,WAK1,SNG2,AOP2,AT4G09110,AT4G09220,AT4G11040,AT4G13880,AT5G35798,AT2G13350,AT4G25380,AT5G07850,PHT3,AT3G44805,AtMYB72,AT3G45755,ATCHX25,AT5G15110,AT2G07505,AT1G66870,AT1G50160,AT1G23770,AT1G61540,1/8/1900,AT1G62220,AT2G33655,AGL63,ATCHX2,AT1G11810,FUT9,THI2.1,AT1G35490,AT2G30380,AT2G22160,AT2G33080,FRK1,AT2G36200,ArRABA1h,AT3G30460,DPBF2,AT3G18530,ATEXPA17,AT1G80865,AT4G18660,AT3G12545,CYP81D2,AT1G73600,AGL98,AT2G02290,AT5G44940,AT5G49310,ATHSD6,AT5G51420,AT2G34610,ATSBT5.4,RLK1,AT5G16700,AT5G09490,AT1G23205,AT3G24982,AT1G80990,AT1G47280,AT1G14930,ALPHA-TIP,AT1G47625,AT2G03130,AT2G43620,SDH2-3,ATCWINV4,AT2G04440,AT2G41730,AT3G09620,AT3G19690,AT3G42340,BG3,ATMPK10,AT4G12490,ATHSP23.6-MITO,ADF7,AT4G28800,TIR,AT4G35650,CYP81D8,AT4G17710,ANAC090,SQP1,AT5G37280,AT5G44950,AT5G45180,AT5G53240,AT5G51440,AT5G55800,AT5G59640,AT5G61090,AT3G26614,AT1G24270,AT1G02830,AT1G14950,AT1G74990,AT1G28650,AT1G51810,AT5G56570,AT2G22590,AT2G16120,AT2G01840,AT2G13130,AT5G54420,AT3G46410,SCPL39,AT3G53330,AT3G58450,AT3G63040,AT3G26110,AT4G12270,AT4G13900,ATPER1,PEI1,AT5G22810,AT5G24160,AT5G38250,AT5G41890,AT1G66210,AT2G31215,AT5G63750,AT5G64120,AT5G17470,GLP3,AT1G32030,AT2G16835,AT1G47885,AT1G51300,AT1G05650,AT1G17100,AT1G35210,AT1G71000,AT1G05510,AT1G78400,SRF5,AT1G31690,ATMKK10,AT4G04635,AT2G28490,WRKY55,AT2G04420,AT2G37770,AT1G53130,AT3G18460,AT3G24400,AT3G46070,AT3G56420,AT3G58480,AT4G00165,AT1G12190,AT1G29140,ACS7,ATS3,GRP14,AT5G09560,AT3G24900,AT5G51195,AT5G38260,OLEO2,AT5G42490,AT5G47470,AT5G54950,BHLH100,AT5G62360,AT5G63225,AT4G03930,AT5G28470,PAB1,AT3G19085,HR4,AT1G60570,AT1G62070,AT1G65500,AT1G04670,GA4H,AT5G43755,AT5G24640,AT1G11590,AT1G72110,AT1G54230,AT2G41910,AT2G40560,UGT84B2,ATPP2-B6,AT2G34700,AT2G25470,AT1G36970,MYB118,AT3G25960,SUP,AT3G28250,AT3G43120,AT3G47480,AT3G50020,AT1G23910,AT3G60120,AT4G00190,AT4G02300,AT4G07820,AT4G08990,AT4G11490,AT4G12290,AT4G12470,AT4G13760,AT4G22470,AT1G32420,AT1G35630,FAE1,ATASE3,AT5G05340,AT4G09690,ATSUC9,ARK1,AT1G77100,AT5G46810,AT5G55240,AACT1,CRK6,XLG2,AT2G12190,AT4G04330,AT2G19000,FRO1,AT1G33760,AT1G31000,AT1G62580,AT1G60750,AT1G60320,AT1G78500,ATTPS12,AT1G72900,AT1G52680,ACT9,AT2G23910,AT4G21630,UGT72C1,AT2G18190,AT2G44800,AT3G25260,AT3G13220,AT3G45180,APUM20,ATEXPB5,AT4G04500,ATTPS13,AT4G32510,AT4G35280,AT4G14470,AT5G01440,YAP169,AT3G48650,PDF1.2c,AT5G40680,AT5G23180,OLEO3,APUM12,AT5G14980,AT2G25565,MLO5,AT1G09720,AT1G05680,AT1G72910,AT1G49100,AT1G53260,AT2G29860,AT1G52770,AT1G17960,MAPKKK13,AT1G43260,AT1G42190,CKI1,AT2G31080,UGT73C2,AT2G32780,ATPP2-B4,AT2G22360,AT2G18180,AT2G43890,AT2G15010,CYP709B1,AT3G01570,AT1G13370,AT3G21660,AT3G12900,AT3G22490,AT3G28270,AT3G45670,AT3G46240,AT3G49340,AGL81,AT3G61720,CP12-2,ATIPT3,AT4G03950,AT5G38370,pEARLI 1,AT4G18720,AT4G23260,SPL,AT5G01080,AT3G20520,AT1G52900,AT1G63060,ARR21,ATBZIP75,AT5G22470,AT5G34780,CRA1,AT1G66220,AT5G54740,AT5G14990,AT1G35617,AT3G16555,AT3G24610,AAO4,AT1G30780,GLIP2,AT1G65190,AT1G32660,AT1G72920,WRKY67,AT1G68170,ATPP2-B5,AT1G65090,AT2G03770,AT4G16146,AT2G02520,CHAT,AT3G04550,CYP71A26,AT3G16530,AT3G18570,AT3G49130,AT3G57310,ATMRP9,AT3G51870,AT4G08530,CYP706A6,AT4G12530,AT1G44020,AT4G38560,AT5G04500,TET11,AT5G27510,AT5G37910,AT5G38760,ACD6,cpHSC70-2,WAK4,AT3G29790,AT1G78030,AT1G56040,AT5G24060,AT4G36570,AT1G15600,AT1G49030,AT1G55700,STZ,AT2G47570,AT4G18920,CYP76C4,AT2G44070,AT4G23610,AT2G17740,AT3G22640,OLEO4,AT3G19350,AT3G18220,ESM1,ATMKK8,SCPL17,ASHH4,AT3G09130,ATCHX12,APUM11,AT4G12830,AT4G13080,AT4G17920,ATSS4,AT4G21000,AT1G10190,AT4G33830,WRKY62,AT4G15750,AT3G27480,AT5G28230,AT5G62730,AT3G01440,COPT3,ANAC025,AT1G61320,AT5G13210,AT1G04560,AT1G09260,AT1G15610,AT1G33030,AT1G52810,AT1G14550,AT1G27870,AT2G06490,M17,AT5G43065,AT2G23640,AT3G21080,AT3G05650,FUS3,AT3G20360,CYP71B22,AT3G45950,AT3G46660,GPT2,AT4G04690,AT4G11580,AT4G18250,AT4G27140,AT4G30590,AT4G34950,AT5G01540,AT5G11820,AT5G36810,ATCP1,AT5G50480,AT5G58770,AT5G59190,AT5G64790,AT5G20370,BSU1,BCP1,AT1G43910,AT1G51410,CLE26,AT1G31100,BZO1,AT1G48990,AIG1,AT3G42656,AT1G62410,AT1G27580,PDF1.3,ALD1,AT1G53010,AT3G20610,DELTA-VPE,AT3G21030,AT3G48950,AT4G15660,AT3G20810,AT2G11010,AT3G28080,FLA14,AT2G41470,ATPAP11,AT5G52760,AT1G02700,EXLB3,AT4G09770,AT5G53840,AT1G64290,AT3G48230,ATPAP16,AT2G29920,AT1G47770,EP1,AT5G05720,CLE40,AT1G15840,AT4G39750,AT2G25410,AT1G67635,AT4G01980,AT3G62460,AT4G23220,AT4G03292,AT3G25727,AT4G23330,AT3G58550,BHLH038,AT5G03480,AT5G23240,AT4G27150,AT4G02490,AT5G37490,AT5G05070,AT3G43880,AT3G42713,AT5G45690,PDF1.2b,AT4G27170,MEE26,AT5G28535,AT4G23230,AT2G38905,AT3G44770,AT3G55670,AT5G22680,AT5G35300,AT5G54700,AT1G59722,EMB1692,AT5G66340,AT2G20465,AT3G28770,AT3G44935,AT4G13470,AT4G16540,AT4G18860,AT5G29613,AT3G15440,AT3G58410,AT4G05581,AT4G08593,AT5G08600,AT5G15360,AT1G65120,AT2G27660,AT2G28820,AT2G43740,AT3G29000,AT4G12735,AT4G16560,AT2G22050,AT5G46120,AT5G55430,AT2G14500,AT3G28680,SP1L5,AT3G25200,AT4G29200,AT2G04395,AT3G12420,LCR24,AT4G31520,AT5G43405,AT1G21990,AT1G52325,AT5G25415,AT5G28070,AT1G53625,AT2G18193,AT4G08874,AT1G58242,AT5G33406,AT2G14560,AT3G23860,AT4G11020,AT5G27800,AT2G27630,AT3G03230,AT2G43795,AT5G04045,CCD7,AT5G16740,AT5G41280,AT3G62850,AT2G35090,AT2G40745,AT4G17210,AT5G53230,AT2G32275,AT3G43684,AT1G06925,AT4G20095,AT4G31680,AT2G13980,AT4G33930,AT5G66740,AT1G21320,AT1G26890,AT1G47450,AT4G31830,AT5G52940,AT5G62510,AT1G44080,AT1G63055,MOT1,AT4G19260,AT5G27170,AT5G41660,AT3G59180,AT5G46320,AT3G13830,AT5G44575,AT5G49050,AT1G65160,AT2G20620,AT5G52740,AT1G52460,AT2G34820,AT5G26805,AT2G39490,AT5G63340,FLA3,AT2G21930,AT5G48280,AT4G20510,AT5G25950,AT2G34230,AT3G56790,AT2G03230,AT5G52730,AT5G55135,WRKY63,AT1G66640,AT2G33705,AT4G22800,AT5G64540,AT5G48270,AT5G56470,AT2G28020,AT4G07868,AT4G12950,AT4G18310,AT3G45256,AT1G51920,SCRL5,AT2G12405,AT2G26135,AT1G70150,AT5G14345,AT5G60560,AT1G47400,AT3G44070,AT4G00970,AT1G48730,AT5G03090,AT5G41440,AT1G47680,AT2G07120,AT2G28085,AT3G11920,AT3G59070,AT2G05400,AT2G36550,AT4G03640,AT4G14250,AT5G50220,AT3G54530,AT4G31280,AT1G47395,AT2G06555,AT3G30720,AT4G14815,AT3G19560,AT2G04840,AT1G69630,AT2G29830,AT4G12930,AT2G18540,AT1G74220,AT2G02515,AT2G34030,AT3G47140,AT4G32090,AT5G60140,AT3G18540,AT3G47230,AT2G26130,AT5G55750,AT1G28695,AT1G61105,AT3G27410,AT3G51200,AT2G39530,AT2G43960,AT2G47340,AT4G38870,AT1G50080,AT1G47660,SAG13,AT3G58980,AT1G70640,AT2G11775,AT4G00320,AT4G22060,AT5G54450,AT2G44340,AT3G57960,AT1G13200,AT2G05600,AT3G44755,AT5G38090,AT2G15130,AT4G19940,AT5G29210,CYP79C2,AT1G77655,AT3G45510,AT3G61390,AT4G39930,AT5G06790,AT5G54330,AT3G24850,AT4G18395,AT4G27657,AT5G36670,AT2G38823,LCR85,AT5G15000,AT5G27500,AT4G14225,AT1G13550,AT1G45190,AT3G44810,AT4G17585,AT1G36020,AT2G04920,AT2G03040,AT2G05915,AT5G02980,AT3G18360,AT5G46130,AT5G55440,AT4G07940,AT4G15050,AT2G16100,AT5G53260,AT2G30760,AT3G29610,AT4G13150,AT5G59060,AT4G28920,AT4G10860,AT4G31260,AT5G38080,AT1G35880,AT5G38270,AT2G38590,BHLH039,AT1G27280,AT5G49680,AT1G56380,AT2G16210,AT2G16340,AT2G27270,AT3G13130,AT2G37780,AT3G43400,AT5G27590,AT1G64820,AT3G52330,AT5G55893,LBD5,CHR34,AT2G33400,AT4G08555,AT1G49770,AT4G22650,AT1G74480,APUM21,AT4G19580,AT5G48575,AT4G10190,AT1G07645,AT3G43280,AT5G60380,AT1G16950,AT3G58080,AT3G44800,AT4G12150,AT5G39540,TOC75-I,AT1G04500,AT5G24050,AT3G43760,AT3G48860,AT3G58440,AT5G27810,AT1G69470,AT4G11911,AT4G24300,AT5G41780,AT2G03610,AT2G44030,ATPP2-B14,AT5G09940,AGL95,AT2G23830,AT2G17690,AT2G13760,AT3G43850,AT4G08730,AT5G33390,AT3G01185,AT3G24250,AT3G06145,AT5G59105,AT2G04050,AT3G11060,AT3G61730,ANAC044,AT1G49405,AT2G05642,AT4G34550,AT5G28930,AT5G40790,AT5G43185,AT5G54720,AT5G52610,AT3G46360,AT4G09860,AT5G45573,AT1G74870,AT2G28920,AT2G30370,HR3,AT5G28295,AT5G52965,AT1G21940,AT3G58150,AT5G54790,AT1G72490,AT2G01790,AT4G26030,AT2G09840,AT2G30115,AT2G33520,AT2G03420,AT5G07490,AT3G18120,AT4G14805,AT1G17665,AT1G77650,AT3G18250,AT3G45500,AT4G19280,ATCHX9,AT2S3,AT5G27945,AT4G08850,AT3G24068,AT4G01037,AT4G13442,AT3G29644,AT5G28667,AT1G72520,AT1G54860,AT2G10735,AT1G48422,AT2G06845,WRKY64,AT5G55070,AT1G30945,AT4G15953,ATBRXL4,AT1G53490,AT1G47265,ANAC082,AT5G41494,AT2G14535,AT2G41225,BT4,AT1G36622,AT5G22200,AT1G12660,AT1G44075,AT1G43920,AT1G36775,AT1G69110,AT1G42090,AT1G16225,AT1G44382,AT1G65485,CYP71B27,AT1G36480,AT1G50130,ANAC006,AT1G29830,AT1G19810,AT1G59920,AT1G59930,AT1G42620,AT1G56640,AT1G11150,AT1G42590,AT1G36360,AT1G18120,AT1G33835,AT1G31270,AT1G36220,AT1G55035,AT1G45040,AT1G78095,AT1G65365,AT1G65345,AT1G54600,AT1G47320,AT1G54985,AT1G46048,AT1G46120,AT1G63920,AT1G47705,AT1G40080,AT1G07620,AT1G40089,AT1G41850,AT1G40470,AT1G11806,AT1G35360,AT1G38423,AT1G37735,AT1G68285,AT1G66710,AT1G50190,AT1G40078,AT1G43502,AT1G38230,AT1G50220,AT1G43145,AT1G60510,MIR157D,SCRL2,AT1G34047,AT1G35435,AT1G49715,SCRL4,AT1G15757,AT1G13609,AT1G32763,LCR31,AT1G31772,AT1G13608,AT1G26796,SADHU8-1,AT1G45211,AT1G12672,AT1G12667,AT1G10747,AT1G26208,MIR402,MIR404,AT1G08005,AT1G28630,AT1G53635,AT1G35242,AT1G47946,AT1G36272,AT1G36942,AT1G21327,AT5G55150,AT1G22651,AT1G18871,AT1G27461,AT1G19086,AT1G64618,MIR858a,AT1G65642,AT1G28306,AT1G60783,AT1G43171,AT1G31072,AT1G14048,AT1G53801,AT2G26220,AT2G23096,AT2G18420,AT2G40955,AT2G12340,TET14,AT2G13145,AT2G12390,AT2G13200,AT2G13116,AT2G13128,AT2G12890,AT2G13590,AT2G11830,AT2G13470,AT2G13480,AT2G13530,AT2G02670,AT2G16110,AT2G10895,AT2G16310,AT2G40350,AT2G15250,AT2G15840,AT2G10890,AT2G05340,AT2G06760,AT2G14796,AT2G04150,AT2G04043,AT2G32350,AT2G29430,AT2G04260,AT2G04066,AT2G04070,AT2G14990,AT2G10990,AT2G11600,AT2G27395,AT2G10250,AT2G10405,AT2G06540,AT2G27420,AT2G07200,AT2G37830,AT2G14405,AT2G12420,AT2G12407,AT2G14400,AT2G11290,AT2G14475,AT2G07070,AT2G24370,AT2G03970,AT2G10320,AT2G34185,AT2G07795,AT2G06166,SCRL18,AT2G04033,AT2G03936,LCR76,LCR60,LCR82,AT2G19802,AT2G36325,AT2G21905,AT2G31005,AT2G20618,AT2G22145,AT2G37555,AT2G22955,AT2G05995,AT2G03972,AT2G23148,AT2G46308,AT2G02026,AT2G24834,AT2G22241,AT2G26267,AT2G04864,AT2G31271,AT2G22426,AT2G36053,AT2G29654,AT2G13463,AT2G13547,MIR836a,AT2G09994,AT2G20555,AT2G20816,AT2G30766,AT2G43261,AT2G22942,AT2G23808,AT2G15025,AT2G19796,AT2G07213,AT2G18917,AT3G22000,AT3G51690,AT3G31908,AT3G42650,AT3G30420,AT3G60565,AT3G30187,AT3G31365,AT3G30730,AT3G21933,AT3G44245,AT3G42320,AT3G43158,AT3G50160,AT3G31810,AT3G42875,AT3G33084,AT3G44640,AT3G13840,AT3G46482,AT3G14500,AT3G17203,AT3G42182,AT3G32387,AT3G44793,AT3G33163,AT3G29175,AT3G29727,AT3G52527,AT3G32445,CYP76C8P,AT3G30764,AT3G55860,AT3G30875,AT3G32023,AT3G28540,AT3G55810,AT3G29634,U6-26,AT3G30805,AT3G30803,AT3G30812,AT3G31993,AT3G44030,AT3G32377,AT3G20705,AT3G59930,AT3G42230,AT3G19025,AT3G31350,AT3G19045,AT3G32095,AT3G43833,AT3G51171,LCR48,LCR55,SCRL19,LCR53,AT3G27831,LCR18,AT3G10195,MIR157C,DVL15,AT3G01327,AT3G01324,AT3G30385,AT3G45252,AT3G10185,AT3G48205,AT3G30386,AT3G45275,AT3G45285,MIR169L,MIR169I,AT3G59778,AT3G19790,AT3G33528,AT3G55252,AT3G03828,AT3G55258,AT3G29195,AT3G05193,AT3G61827,AT3G63233,AT3G43572,AT3G30222,AT3G21371,AT3G10974,AT3G22723,AT3G10526,AT3G50337,AT3G16851,AT3G24516,AT3G13686,AT3G44798,AT3G14025,AT3G27809,AT3G26134,AT3G13825,AT3G15534,AT3G22345,AT3G23633,AT4G08720,AT4G06623,AT4G08645,AT4G03810,AT4G06646,AT4G06748,AT4G03726,AT4G10230,AT4G03695,AT4G03723,AT4G06556,AT4G06498,AT4G07720,AT4G06510,AT4G06489,AT4G06491,AT4G20365,AT4G06529,AT4G06523,AT4G06521,AT4G05918,ASK11,AT4G04316,AT4G04293,AT4G04405,AT4G04100,AT4G07862,AT4G04270,AT4G04255,AT4G20640,AT4G18690,AT4G06652,ASK12,AT4G08105,AT4G16030,AT4G08071,AT4G08030,AT4G08078,AT4G29658,AT4G02733,SCRL21,LCR21,LCR25,AT4G30072,AT4G08875,AT4G08485,LCR13,LCR34,LCR2,AT4G00356,RALFL29,MIR824a,AT4G26288,AT4G03038,AT4G33585,AT4G23205,AT4G09464,AT4G24974,AT4G23103,AT4G04601,MIR826a,AT4G25885,AT4G12617,AT4G14301,AT4G16024,AT4G03566,AT4G32342,AT4G00467,AT4G09584,AT4G35733,AT4G31196,AT5G35796,AT5G35800,AT5G39170,AT5G28673,AT5G36737,AT5G30450,AT5G36300,AT5G31989,AT5G35490,AT5G26692,AT5G32654,AT5G33400,AT5G26286,AT5G35608,AT5G25260,AT5G34852,AT5G32042,AT5G34862,AT5G10420,AT5G28065,AT5G27882,AT5G29720,AT5G29075,AT5G29337,AT5G17100,AT5G28773,AT5G39070,AT5G34665,AT5G28285,AT5G37175,AT5G39861,AT5G35076,AT5G33355,AT5G32572,AT5G32569,AT5G33258,AT5G37270,AT5G42957,AT5G33250,AT5G32513,AT5G32623,AT5G35205,AT5G43035,AT5G35050,AT5G22791,AT5G50423,AT5G46873,AT5G51845,AT5G44973,LCR58,AT5G42223,AT5G16453,AT5G48595,AT5G48605,AT5G54215,AT5G45905,AT5G55410,AT5G60978,AT5G44495,AT5G34828,AT5G34882,AT5G05025,MIR169B,AT5G42567,AT5G40348,AT5G16235,AT5G56452,AT5G52901,AT5G43066,AT5G42504,AT5G15008,AT5G16567,AT5G21005,AT5G18748,AT5G17795,AT5G03944,AT5G04853,MIR869a,AT5G01732,AT5G66558,AT5G08695,AT5G40275,AT2G44370,CYP79C1,AT3G60170,AT4G00160,AT5G52090,AT3G42115,AtMYB45,AT4G10850,AT3G59010,AT2G21820,AT5G51190,ABI3,GRP3S,AT5G35935,AT2G16650,AT4G28330,CAB3,AT4G15690,AT5G03830,AT1G77700,AT3G48640,AT1G61340,CYP705A27,AT2G32220,AT3G19230,AT2G20930,AT2G20480,MUTE,AT3G03660,AT1G19030,ATRAB28,AT2G05580,AT2G40205,AT4G14315,ATPP2-B13,ATOPT5,AT1G30140,AT3G17200,AT4G18540,AT1G02965,AT2G24810,SADHU3-1,AT5G05050,AGL96,AT5G24250,AT5G28560,AT4G25845,AT3G19615,AT3G23450,AT1G54445,AT2G15345,AT2G16586,AT3G43290,AT2G10560,LOX3,AT2G24420,XRCC3,AT4G00150,AT-TCP20,AT5G01990,AT4G15093,AT3G28670,ATGH9B18,MYB55,AT3G23060,ATHSD1,PFU1,ATPMEPCRD,ATGOLS3,AT4G03290,AT2G15555,CESA8,AT2G19700,AT1G30850,AT3G23350,AT3G31990,AT2G06840,AT2G14288,AT1G33450,AT2G14940,AT3G06433,AT1G10745,CDA1,AT5G27345,AT5G12380,AT5G25920,AT2G29780,AT1G64630,AT3G43546,AT2G14620,LDL1,AT2G32645,AT5G11580,AT2G14115,HDA05,AT5G18037,AT1G26799,AT4G31355,AGP11,AT2G44240,GGPS2,CR88,1/7/1900,AT4G01080,AT5G41740,AT4G08895,AT2G39060,ATCSLG2,AT2G16890,ATCHX23,AT2G30350,AT1G10390,AG,AT1G07130,AT3G13227,AT4G33980,ATPUP6,AT1G74130,AT1G26150,AT2G10970,AT2G27650,AT2G22710,CYCD7,AT1G52695,AT3G45710,AT2G23900,AT1G60640,AT3G28820,AT4G19530,CYP79A3P,AT2G23880,COBL6,AT1G73860,AT3G28980,AT1G36580,AT1G66730,AT1G50750,AT3G28490,CMT1,AT1G40109,AT1G62225,AT2G33320,AT5G54360,AT2G22010,AT2G01130,AT4G13390,PHYE,AT1G49440,AT5G25955,AT1G20860,AT1G54430,AT1G62270,AT3G49300,AT1G43680,AT1G20680,AT1G32300,AT1G22000,AT3G28157,AT3G25550,AT3G30852,AT3G31950,GALT1,AT3G28350,AT1G33840,AT5G38810,AT1G34100,AT1G47370,AT5G24790,AT3G29725,CAL,AT4G16810,WRKY68,AT2G16300,AT2G10650,AT4G16200,AT2G15610,AT2G07721,CALS5,AT4G19240,AT2G16840,AT4G20970,SCPL51,AT5G10760,AT1G43886,AT5G41750,AT2G41650,AT3G28580,AT3G01345,AT5G35660,GRP16,NHL22,AT3G08947,ACT4,AT1G04660,DCL2,AT2G20690,AT2G36820,MYB89,TAF12,ATMRP15,AT5G03435,AT5G22520,AT3G09510,AT5G50510,AT4G09745,AT4G32110,AT2G12900,AT1G68380,APRR3,ATCHX6B,AT4G00390,PAB6,ATOEP16-S,BRX-LIKE4,CHX6B,CYCD7;1,EMB3008,MAH1,MYB72,ORG2,ORG3,PAP11,PAP16,RTFL4,SSIV,SYN1,TAFII58,TIP3;1,TPS12,TPS13,UBC25,UNE17,ZIP12 RICHTER_PIF1345/COL-0II_DN Down-[pif1345] vs [Col-0II] (Table S2 PubmedID:20844019) ATGH9B15,AT4G28720,AT5G12050,AT5G57660,AT5G66110,AT1G04380,TAT3,STP1,AT1G07690,AT2G38340,AT3G20380,AT4G29190,AT4G36040,CYP96A9,AT5G46940,AT5G50260,PORA,OBP4,PAP3,ATEXPA8,AT3G29410,AT3G45080,AT3G48970,AT3G53830,AT3G62040,AT1G29090,AT5G48490,AT3G21330,AT5G62040,ATHB52,AT1G05330,AT1G78720,ATMYBL2,AT1G13420,ATCTH,SCPL22,AT2G47880,CYP96A5,APRR9,AT1G02660,AT3G55970,GLP9,AT5G17960,AT5G19110,THI2.2,SNRK2-5,AT3G29970,AT5G04120,IAA6,AT2G32150,AT3G48790,PIL5,AT5G64170,AT4G18650,GH3.5,AT4G29450,AT1G19320,AT5G44440,MYB99,AT5G18050,NAP,AT3G29370,IAA19,AT5G07610,ASK10,NCED3,PIL6,AT5G18020,ATEM1,AT2G31035,AT2G23400,AT1G69160,AT5G46950,ATGOLS7,SCPL31,AT5G18030,AT1G66100,ETO3,AT1G73120,AT4G09870,AT5G10040,AT5G07000,AT1G29460,AGL105,AT3G42155,AT5G39110,AT1G66360,AT1G52190,PIF4,HLH1,YUC2,AtMYB79,GA5,IAA34,ACS8,SAUR_AC1,ATHB-2,AT5G07010,AT5G19140,XTR3,HFR1,CLE7,AT1G19510,AT2G19810,AT3G62570,FAMT,TCH4,AT1G02350,AT5G39865,AT1G76640,AT2G18480,AT3G44870,ATNRT2:1,DRM1,CIPK20,AT5G02020,AT2G19660,AT1G51030,ATPMEPCRD,AT1G75490,AT2G44910,AT3G02410,ASN1,CDF3,AT4G02160,NCED4,CBF2,AT4G27310,AT5G18010,AT5G63250,PRE1,AT5G59860,AT5G19880,AT2G17036,AT2G17880,PKS4,AT5G38200,AT1G04180,PKS2,AT2G18470,AT3G03830,AT4G02170,ADS1,CYP71A20,AT1G32450,CIPK17,DOG1,AT5G19890,RD20,AT2G21200,AT3G03820,AT3G29670,AT3G44560,AT5G44316,AT1G69570,AT4G13790,AT5G02540,PRR7,AT1G79700,AT1G48800,AT2G29650,AT3G48390,AT3G49160,AT3G49360,HAT3,AT4G16000,SEN1,AT5G01740,ATGCN2,AT5G66260,AT3G29635,AT1G27670,AT1G17990,PGAZAT,AT2G47550,AT5G56490,AT4G10150,AT1G29100,CP1,AT1G49570,AT5G22500,SUPER1,AT1G73870,ACS5,AT1G03610,AT1G73480,ATTPS11,LHCB2:4,AT3G19620,LHCB2.1,AT5G39520,AT5G44260,AT1G67900,AT1G58725,AT5G48890,AT3G54510,AT5G18080,AT3G12320,AT3G50800,AT5G39180,AT5G15160,AT1G70270,AT3G48510,LHCB2.2,COR414-TM1,AT4G12980,ATOFP15,AT2G28780,AT3G55240,AT3G28857,AT2G19610,PIL1,AT1G20990,AT5G10210,AT3G59900,MEE8,FHL,AT3G54500,AT1G63950,AT1G61430,AT1G29420,AT1G06350,AT1G26250,AT4G22214,AT2G01050,AT1G76610,AT4G23030,SLAH1,IAA29,AT3G13980,AT1G61160,AT3G19680,ZW2,AT2G34000,AT5G09780,AT2G34350,AT4G16515,AT5G64190,AT4G37860,AT2G45610,AT2G46670,AT3G11000,AT5G05965,AT2G39855,AT2G23840,AT4G01390,ATNUDT24,AT2G32050,AT4G23380,AT5G52790,AT5G59580,AT1G10385,AT5G54585,AT1G64360,AT4G21840,AT2G14115,AT1G36680,AT1G73550,BRC2,ANAC004,AT1G11803,AT1G68905,AT1G51802,DVL3,AT1G10588,AT1G67148,AT1G11684,AT1G26773,AT1G62333,AT1G15015,AT2G06985,AT2G44195,AT2G32490,AT2G07700,AT2G16895,AT3G16390,AT3G31395,SRO4,AT3G08885,AT4G22545,AT4G07700,AT4G05616,AT4G11945,AT4G22960,AT4G11393,AT4G33467,AT4G21745,AT4G21926,AT5G39150,AT5G27043,AT5G33395,AT5G62623,DVL1,AT5G40382,AT5G03377,AT1G59030,SVP,AT1G02610,AIR12,AT1G06980,AT1G52650,AT5G16360,AT5G62280,AT5G67410,AT2G01340,LHB1B1,AT1G68250,AT1G18020,AT2G37320,LHB1B2,LHCA4,LHCA1,IAA14,SUS4,AT1G20880,AT1G29490,AT4G31830,LHCB3,AT5G42235,XTR7,AT1G54870,AT5G44417,AT3G55900,GLP6,AT2G29670,AT5G06980,AT5G18060,AT4G00910,PIF3,SNRK2.5,WES1,PAR1,YUCCA5,OFP15,TCP12,RTFL21,RTFL18,POC1,SRK2H YANT_NUCLEAR_RP_UNAMBIG_UP Nuclear RP Up Unambig (Table S2 PubmedID:20675573) AT5G62080,AT5G07230,AT3G07450,AT3G52130,AT5G60610,AT4G29980,AT5G15360,AT1G61070,AT1G54040,AT1G62940,AT1G50290,AT4G14080,AT1G47980,AT4G20420,AT1G33430,AT1G66850,AT4G19240,AT2G18660,AT3G51590,AT3G15400,AT1G02813,AT1G69500,AT5G66985,AT4G03050,AT4G34850,AT3G44070,AT3G58780,AT1G01250,AT5G52760,AT2G16910,AT1G49230,AT5G44400,AT3G42960,AT3G25180,AT2G40570,AT5G15720,AT5G47220,AT1G33055,AT5G20150,AT3G26800,AT5G46780,AT5G16920,AT1G44800,AT5G10140,AT1G19640,AT1G61800,AT2G38530,AT3G17790,AT4G29690,AT3G22840,AT3G02040,AT5G40260,AT2G42610,AT3G47420,AT1G44970,AT1G67990,AT5G61600,AT1G04660,AT1G06170,AT1G69180,AT3G50930,AT5G67060,AT4G27280,AT3G59845,AT5G51190,AT5G64870,AT1G04645,AT3G21560,AT1G67860,AT4G13770,AT1G03720,AT2G41100,AT4G29770,AT2G14210,AT1G71160,AT5G10760,AT3G16650,AT5G52750,AT5G61640,AT5G55450,AT3G29970,AT3G59190,AT5G02810,AT5G50210,AT5G42800,AT5G18000,AT4G38000,AT5G48490,AT4G02380,AT3G27325,AT1G13260,AT2G18600,AT4G30490,AT4G33560,AT5G54470,AT4G35420,AT2G40960,AT2G46140,AT4G26280,AT2G45660,AT3G56710,AT2G42830,AT1G77120,AT3G46770,AT2G04450,AT1G22770,AT1G24575,AT4G14365,AT2G11810,AT1G72070,AT5G64770,AT5G49630,AT3G05690,AT1G01470,AT5G24270,AT4G17670,AT2G28085,AT2G16060,AT3G06020,AT5G21150,AT1G13140,AT5G13380,AT4G24110,AT1G52700,AT2G43620,AT1G75790,AT3G12810,AT4G24040,AT1G43800,AT3G11980,AT1G62560,AT5G55560,AT2G39510,AT3G48640,AT2G39980,AT1G51670,AT3G10040,AT2G46400,AT1G14090,AT2G47930,AT4G21650,AT1G64780,AT1G21580,AT2G36220,AT3G53980,AT5G63760,AT5G06530,AT1G22550,AT4G15490,AT2G40130,AT5G59320,AT4G00330,AT1G52770,AT3G27220,AT3G05650,AT5G47240,AT4G28395,AT2G37210,AT2G07680,AT2G40435,AT1G35710,AT5G63850,AT1G10110,AT5G49360,AT1G57750,AT5G56500,AT2G41180,AT2G41990,AT3G13980,AT1G63050,AT1G73805,AT1G59740,AT3G24500,AT1G67870,AT4G21960,AT2G48050,AT5G40780,AT1G62570,AT1G35730,AT5G44440,AT3G12320,AT1G54160,AT4G11280,AT1G11130,AT1G67770,AT5G57350,AT2G28550,AT5G48350,AT1G58340,AT5G10380,AT5G39890,AT2G32160,AT2G21430,AT2G28100,AT3G23340,AT4G00730,AT3G21020,AT2G02350,AT4G24540,AT2G22500,AT1G08930,AT3G09870,AT3G15990,AT1G17590,AT4G19200,AT4G10270,AT5G62170,AT4G17260,AT4G10260,AT1G62710,AT1G73500,AT5G27220,AT2G42920,AT4G24450,AT4G01700,AT2G32990,AT1G20450,AT5G02310,AT4G25420,AT1G20823,AT5G50790,AT1G66200,AT4G20070,AT1G66130,AT3G21690,AT1G69295,AT1G32900,AT2G41940,AT1G02050,AT5G23660,AT2G20720,AT4G01250,AT3G02550,AT4G35750,AT3G30340,AT3G23560,AT3G13310,AT4G00390,AT3G23840,AT1G73010,AT1G53180,AT3G45640,AT2G40030,AT5G54060,AT2G25810,AT2G22960,AT1G70560,AT3G27770,AT1G53920,AT1G09310,AT5G54490,AT2G27880,AT3G20450,AT5G62000,AT2G35760,AT2G35310,AT2G30740,AT5G62165,AT1G68875,AT4G14090,AT1G10990,AT1G03710,AT5G66650,AT5G11950,AT4G38600,AT5G19550,AT1G07050,AT1G44100,AT5G23780,AT1G20630,AT4G32020,AT5G37130,AT3G17290,AT1G73570,AT2G31880,AT3G47010,AT3G15353,AT2G24220,AT4G12300,AT1G16310,AT1G68570,AT2G29650,AT2G39190,AT1G31070,AT2G33880,AT3G52430,AT5G17760,AT2G39650,AT4G25480,AT2G44745,AT4G37870,AT1G06520,AT4G14130,AT3G27690,AT4G10850,AT2G21450,AT5G57390,AT2G48110,AT5G59310,AT4G34480,AT5G15120,AT4G27450,AT3G56400,AT3G18980,AT1G05490,AT3G21040,AT2G02850,AT2G39850,AT4G01290,AT1G53310,AT1G59870,AT3G59530,AT1G06460,AT4G02860,AT5G32460,AT2G42940,AT5G17220,AT5G67180,AT4G24350,AT2G20340,AT5G61120,AT5G57590,AT3G01510,AT3G01210,AT2G33850,AT1G80450,AT4G22580,AT5G05840,AT1G67800,AT3G50170,AT5G60910,AT3G29075,AT1G33970,AT3G42670,AT4G18960,AT5G39410,AT2G41090,AT1G69830,AT1G60200,AT1G08230,AT5G19240,AT5G04230,AT5G55340,AT1G74580,AT3G57260,AT3G53310,AT3G28200,AT5G23770,AT1G80060,AT3G01930,AT3G04620,AT3G46620,AT2G38640,AT1G15060,AT1G30110,AT2G22010,AT4G21380,AT2G47720,AT5G42860,AT3G19370,AT2G43980,AT1G66350,AT5G49120,AT3G57920,AT2G23060,AT2G36570,AT1G48750,AT2G28540,AT1G31770,AT1G02070,AT1G66180,AT5G47230,AT5G12940,AT3G43190,AT5G26200,AT4G04630,AT3G51000,AT1G73480,AT5G64640,AT3G23150,AT5G25170,AT4G26270,AT1G68170,AT1G73590,AT1G08680,AT5G53370,AT2G47680,AT3G13650,AT1G24625,AT2G46620,AT2G46630,AT1G03060,AT1G78490,AT1G02205,AT1G02800,AT1G19330,AT4G14690,AT2G40140,AT5G09220,AT2G42540,AT2G36970,AT4G28560,AT3G55120,AT5G42050,AT5G27930,AT5G19140,AT1G62250,AT5G48090,AT3G25905,AT4G34310,AT2G29420,AT4G26130,AT1G21310,AT2G16880,AT4G14695,AT5G09400,AT5G12930,AT2G32150,AT5G16570,AT5G07070,AT4G00335,AT2G31035,AT1G01320,AT1G05260,AT2G44080,AT2G36145,AT5G59820,AT4G16490,AT3G25010,AT1G13110,AT2G01520,AT5G14500,AT1G17920,AT5G14960,AT4G17490,AT3G61490,AT1G23480,AT5G17050,AT1G35290,AT1G26210,AT5G57610,AT2G42870,AT1G55250,AT5G58900,AT5G47150,AT1G20880,AT5G39050,AT2G22330,AT3G62610,AT1G19770,AT1G25370,AT4G15093,AT2G15320,AT4G18070,AT4G14560,AT5G47180,AT1G22480,AT2G31160,AT4G31610,AT3G23050,AT1G49750,AT1G62880,AT4G33070,AT2G26040,AT1G64570,AT2G22840,AT2G38180,AT2G40640,AT2G26440,AT1G09600,AT3G22810,AT2G45290,AT5G18170,AT1G34750,AT1G22740,AT5G24010,AT3G28560,AT1G11730,AT5G16380,AT3G15550,AT3G60900,AT3G61890,AT5G05460,AT5G18690,AT2G43400,AT2G40730,AT3G14200,AT1G03740,AT5G51480,AT2G43990,AT5G61090,AT4G17940,AT5G07460,AT3G19930,AT2G44790,AT3G05790,AT5G42030,AT3G19280,AT4G13800,AT1G65920,AT5G41460,AT2G17520,AT1G28610,AT1G71870,AT5G61660,AT1G73630,AT3G15030,AT1G72430,AT4G01460,AT1G22540,AT5G07030,AT5G47400,AT5G39760,AT3G06035,AT1G68740,AT1G14530,AT1G21250,AT5G35980,AT1G14350,AT4G10380,AT1G35910,AT2G21650,AT2G21050,AT1G47990,AT3G07990,AT3G21600,AT2G38840,AT5G24240,AT4G14790,AT1G03610,AT1G55120,AT2G34980,AT5G53210,AT2G22240,AT1G06040,AT3G20630,AT4G18975,AT5G23570,AT3G54390,AT4G26690,AT4G28190,AT1G22030,AT2G02370,AT4G08950,AT4G25150,AT2G35820,AT2G23810,AT2G46530,AT2G42450,AT1G62790,AT2G22170,AT5G46340,AT1G75780,AT5G45160,AT2G22540,AT1G24470,AT5G62210,AT4G27640,AT1G22275,AT3G57030,AT3G05110,AT1G05850,AT3G03450,AT4G18700,AT5G60100,AT5G52630,AT2G33560,AT4G00740,AT5G01220,AT5G48960,AT1G72500,AT1G70750,AT3G44940,AT5G27240,AT5G24420,AT4G01120,AT1G31130,AT1G71990,AT2G18230,AT2G20320,AT2G20400,AT5G03060,AT1G48090,AT1G68585,AT1G76020,AT4G38780,AT4G19030,AT2G33590,AT5G06610,AT4G21326,AT5G64170,AT5G35570,AT4G17880,AT4G38550,AT5G36160,AT5G42370,AT5G13030,AT2G30960,AT1G17860,AT4G27980,AT2G04650,AT5G02370,AT4G08320,AT1G66080,AT4G29190,AT1G04050,AT5G50990,AT3G16150,AT1G27730,AT3G09540,AT2G38970,AT1G63220,AT3G13510,AT4G36930,AT3G11820,AT5G52540,AT3G06170,AT5G06839,AT1G10700,AT2G23610,AT5G11090,AT5G61400,AT5G03190,AT1G31490,AT1G11160,AT3G46110,AT5G45350,AT2G45680,AT5G04360,AT2G18170,AT5G54770,AT5G52160,AT1G04650,AT3G60440,AT2G38780,AT2G21100,AT3G12890,AT4G37180,AT5G20280,AT5G57655,AT5G13930,AT5G43680,AT5G08160,AT1G29980,AT1G29270,AT1G77760,AT2G39080,AT1G28520,AT5G24710,AT5G14720,AT5G64220,AT2G42800,AT5G61460,AT3G62820,AT1G03770,AT2G23300,AT5G62090,AT1G08410,AT5G43500,AT4G14980,AT3G21270,AT5G20410,AT4G31615,AT5G58070,AT3G55980,AT1G78570,AT1G13250,AT2G47730,AT1G66880,AT1G11780,AT2G04039,AT5G14920,AT5G51850,AT5G04070,AT1G09070,AT3G61760,AT4G16770,AT1G65720,AT1G78610,AT3G61700,AT2G35840,AT3G26050,AT4G30440,AT2G01510,AT1G01360,AT1G24450,AT3G58630,AT4G19420,AT1G05810,AT3G02870,AT1G76040,AT2G27590,AT2G36670,AT3G24630,AT5G12430,AT5G36250,AT4G37760,AT2G41040,AT1G07705,AT2G13290,AT5G60410,AT2G27040,AT2G43160,AT2G30460,AT5G46460,AT1G05470,AT2G42330,AT5G27660,AT2G18245,AT1G11050,AT4G19840,AT1G24600,AT4G36400,AT2G31980,AT3G14230,AT5G64620,AT4G09890,AT4G31910,AT5G06400,AT3G04210,AT1G63150,AT5G16810,AT1G79150,AT1G78380,AT1G15550,AT1G72320,AT1G68470,AT1G32640,AT2G21630,AT1G77410,AT3G58200,AT2G27200 YANT_NUCLEAR_RP_UNAMBIG_DN Nuclear RP Down Unambig (Table S2 PubmedID:20675573) AT1G58430,AT1G63710,AT1G74670,AT2G20870,AT2G42990,AT3G14060,AT3G30720,AT4G28160,AT4G35770,AT4G38770,AT5G22430,AT5G23970,AT5G26270,AT5G33370,AT5G52390,AT5G55720,AT1G01600,AT1G69230,AT4G12960,AT4G18340,AT1G15360,AT1G71050,AT2G04570,AT4G23680,AT1G11850,AT1G30950,AT3G10570,AT3G57600,AT4G24140,AT4G04830,AT1G02340,AT1G15260,AT1G79700,AT2G33830,AT4G26260,AT5G15160,AT5G22500,AT5G63660,AT1G12570,AT1G18140,AT1G62540,AT1G77870,AT2G05540,AT2G43610,AT3G11930,AT3G19200,AT3G47340,AT3G50270,AT5G24910,AT1G61810,AT3G45140,AT4G13210,AT4G27590,AT5G38530,AT5G15310,AT5G44020,AT3G07010,AT3G29210,AT1G65450,AT1G75880,AT2G10140,AT2G27920,AT2G40475,AT3G50440,AT5G13730,AT3G21670,AT4G30270,AT5G54250,AT1G13230,AT1G52890,AT1G69530,AT2G05380,AT3G44320,AT4G24050,AT5G65530,AT1G23090,AT4G17470,AT4G29270,AT5G03840,AT2G23760,AT1G30650,AT1G80440,AT1G37130,AT3G05400,AT3G23570,AT3G28220,AT4G14750,AT4G25170,AT5G49960,AT5G57780,AT1G15380,AT3G10525,AT1G26450,AT3G13790,AT2G38110,AT3G01500,AT3G59270,AT1G52000,AT4G36870,AT3G32900,AT4G33960,AT2G20670,AT4G37730,AT2G22850,AT1G68500,AT5G46590,AT3G14210,AT1G16060,AT1G21540,AT5G08260,AT5G45920,AT1G22330,AT1G77690,AT3G51660,AT4G37980,AT1G07720,AT2G28610,AT4G27260,AT4G28330,AT5G11060,AT1G25450,AT2G44740,AT1G30040,AT1G69760,AT2G15960,AT1G16260,AT1G55850,AT1G74055,AT4G27250,AT1G58270,AT1G64060,AT1G64380,AT2G45920,AT3G02500,AT3G55130,AT3G62930,AT4G38810,AT1G68600,AT2G17300,AT2G31070,AT1G23390,AT4G08110,AT1G22360,AT5G36910,AT2G07721,AT4G28780,AT1G12080,AT1G61820,AT1G78960,AT2G17550,AT2G19800,AT3G15720,AT5G61520,AT5G66040,AT1G36180,AT2G27220,AT5G03790,AT5G59670,AT4G21870,AT2G30600,AT2G13970,AT5G20230,AT5G08350,AT5G55330,AT1G54820,AT2G44450,AT3G04290,AT4G28703,AT1G72610,AT1G69490,AT1G70290,AT3G62690,AT4G09760,AT4G15630,AT5G53200,AT1G56720,AT2G17820,AT5G40960,AT3G21770,AT3G16120,AT4G36540,AT2G28420,AT3G12580,AT3G58000,AT2G01670,AT4G24130,AT4G01440,AT5G14380,AT5G23210,AT5G66440,AT1G62660,AT3G62860,AT1G48330,AT1G32840,AT5G14450,AT1G59700,AT2G22970,AT3G61550,AT4G32980,AT1G36550,AT3G16750,AT2G41370,AT1G54120,AT2G25150,AT1G33240,AT2G34810,AT4G20320,AT1G75300,AT5G20050,AT3G22231,AT5G13400,AT3G24140,AT1G11410,AT5G55790,AT4G29700,AT2G33380,AT5G40730,AT4G37540,AT5G65140,AT5G09980,AT3G61220,AT4G15210,AT1G13700,AT1G66760,AT5G65040,AT1G22530,AT1G63180,AT2G30520,AT5G40890,AT5G64330,AT2G29310,AT5G11070,AT1G15980,AT2G17770,AT3G48360,AT4G25950,AT3G53950,AT1G29500,AT1G64200,AT4G26790,AT5G49700,AT4G03510,AT5G54660,AT1G02190,AT1G20070,AT1G30135,AT3G47800,AT4G34410,AT5G39210,AT5G40980,AT2G32100,AT5G02890,AT5G24800,AT3G59940,AT2G01090,AT3G54340,AT3G55560,AT5G58500,AT1G47655,AT1G26920,AT3G54000,AT2G31110,AT2G38060,AT3G30180,AT5G52310,AT1G53080,AT2G45600,AT2G02360,AT2G15620,AT2G19650,AT4G28290,AT5G44680,AT3G43800,AT5G04020,AT3G50700,AT1G27290,AT5G52640,AT2G17500,AT4G36880,AT1G02810,AT5G05690,AT3G14660,AT1G69440,AT4G24510,AT2G45180,AT3G56260,AT2G34840,AT3G59140,AT1G67040,AT1G02850,AT1G28230,AT2G40670,AT5G64500,AT2G22420,AT1G58180,AT1G55370,AT1G79000,AT2G40610,AT4G36410,AT2G34490,AT4G27652,AT5G45500,AT3G42640,AT2G20180,AT1G17830,AT3G16570,AT1G60540,AT5G56950,AT1G33811,AT1G35612,AT3G05640,AT4G12970,AT3G15270,AT3G61010,AT1G04110,AT2G37900,AT5G42060,AT1G26930,AT3G48460,AT5G24150,AT5G08600,AT5G60400,AT1G14280,AT4G37430,AT5G23870,AT2G01890,AT4G09460,AT1G61580,AT2G45170,AT1G16750,AT2G27840,AT3G10520,AT4G07450,AT3G12610,AT4G33800,AT1G64220,AT3G04230,AT4G15800,AT5G43750,AT1G22910,AT4G37610,AT5G61590,AT3G01860,AT5G41650,AT3G09310,AT5G34900,AT2G01990,AT4G17695,AT5G28490,AT5G12110,AT4G38860,AT5G62280,AT3G05980,AT3G47560,AT5G41140,AT1G76090,AT3G43720,AT3G23080,AT4G35985,AT5G54160,AT4G13410,AT2G44690,AT5G20240,AT1G80100,AT2G01940,AT1G28330,AT5G01870,AT2G41560,AT4G02540,AT4G03400,AT3G48100,AT5G02550,AT1G64500,AT1G73530,AT3G02885,AT2G17240,AT4G30350,AT3G52480,AT3G57690,AT4G00400,AT4G38840,AT5G55620,AT2G28630,AT1G55200,AT1G58150,AT1G68440,AT3G57160,AT5G20250,AT4G22753,AT1G25230,AT2G30480,AT1G53090,AT2G45650,AT5G47510,AT2G28470,AT5G42720,AT4G11190,AT4G16590,AT3G55710,AT3G62550,AT1G07260,AT5G53550,AT2G37450,AT5G63080,AT1G70790,AT1G09570,AT1G04980,AT5G49320,AT5G66800,AT1G60550,AT1G70820,AT3G26085,AT4G27240,AT5G45480,AT2G40010,AT2G26170,AT5G47810,AT4G20260,AT2G13360,AT4G03320,AT5G24860,AT2G39390,AT5G57180,AT3G19000,AT3G29030,AT3G58540,AT2G10940,AT5G18850,AT1G19180,AT1G78020,AT2G29995,AT3G26330,AT1G10060,AT2G26520,AT5G22920,AT1G21730,AT3G27610,AT5G48900,AT5G50800,AT1G03660,AT1G12240,AT1G12780,AT3G48970,AT2G39330,AT1G67050,AT2G36590,AT4G39780,AT5G10170,AT1G10640,AT1G49430,AT3G47430,AT4G18970,AT5G22860,AT5G53070,AT4G32540,AT3G28130,AT4G36920,AT2G05890,AT4G23060,AT3G50280,AT2G31730,AT3G02380,AT3G55630,AT1G34245,AT5G04790,AT2G33810,AT1G03170,AT1G04920,AT3G45430,AT1G61740,AT5G16030,AT5G58670,AT2G21860,AT4G03060,AT3G21090,AT1G23410,AT5G23810,AT5G60890,AT1G51805,AT4G11360,AT3G15630,AT1G66940,AT4G33150,AT2G47260,AT2G40880,AT3G23820,AT3G29410,AT2G23050,AT3G52870,AT3G14360,AT1G02790,AT1G64490,AT5G37260,AT5G45420,AT3G06750,AT3G25130,AT5G25880,AT4G17350,AT1G20160,AT1G22640,AT5G40040,AT3G16520,AT5G17890,AT5G14410,AT5G20935,AT5G13880,AT1G07440,AT4G00480,AT2G16760,AT4G33220,AT1G33600,AT2G42110,AT1G49500,AT5G27110,AT1G53160,AT2G25650,AT3G14395,AT3G60980,AT1G52250,AT5G42830,AT2G18280,AT1G59840,AT1G19650,AT3G06433,AT5G04820,AT2G39920,AT3G45780,AT5G50130,AT4G24260,AT1G10910,AT2G40110,AT2G30000,AT3G62650,AT5G58260,AT2G14460,AT3G25670,AT1G22630,AT1G71340,AT2G06050,AT3G01490,AT4G36040,AT1G63650,AT5G15230,AT5G40610,AT2G02960,AT2G27740,AT3G47250,AT4G17460,AT1G76790,AT5G01015,AT1G09390,AT2G02710,AT5G17880,AT2G01950,AT5G02220,AT5G26980,AT1G54570,AT3G53350,AT4G00180,AT4G19120,AT1G52260,AT5G59610,AT2G41190,AT3G45290,AT2G20750,AT2G29180,AT3G52070,AT3G47680,AT3G55170,AT1G26770,AT1G21460,AT1G54050,AT1G75580,AT2G18470,AT3G07274,AT5G13790,AT1G71030,AT3G60690,AT5G40210,AT1G05540,AT1G01610,AT5G44410,AT1G78170,AT2G14660,AT3G55660,AT5G03170,AT2G33220,AT2G46150,AT1G52190,AT5G10770,AT2G21880,AT5G05860,AT1G68710,AT1G29050,AT1G51460,AT3G53210,AT3G44740,AT2G18550,AT5G56380,AT5G40380,AT3G26090,AT2G03750,AT3G23730,AT5G66080,AT5G50820,AT2G24960,AT3G07820,AT3G24506,AT4G05210,AT5G55930,AT1G69040,AT1G60600,AT5G04890,AT5G46730,AT5G18040,AT3G12830,AT4G35990,AT2G21830,AT5G15600,AT2G01870,AT3G29575,AT5G10810,AT5G37290,AT5G54840,AT1G17870,AT5G08370,AT1G49930,AT3G05250,AT3G52900,AT5G01600,AT2G38170,AT3G19010,AT3G14780,AT5G62360,AT4G33130,AT4G21620,AT5G56910,AT4G35930,AT5G54650,AT5G39850,AT2G30500,AT5G36930,AT3G43960,AT1G14890,AT5G48570,AT3G58120,AT5G06190,AT1G35560,AT5G24570,AT1G29160,AT1G80920,AT4G36970,AT5G43020,AT3G46530,AT2G16630,AT5G28770,AT1G63420,AT4G33950,AT3G61950,AT1G03550,AT1G64770,AT3G02000,AT4G27840,AT1G30080,AT2G37380,AT5G57910,AT3G05410,AT3G63330,AT4G36140,AT1G19010,AT3G52360,AT5G14550,AT3G63460,AT4G28460,AT5G43190,AT1G68130,AT5G17300,AT1G06640,AT3G50685,AT4G34760,AT5G05750,AT2G15090,AT2G44640,AT4G27710,AT5G45400,AT4G04750,AT2G14260,AT2G17290,AT3G13450,AT1G74090,AT4G24180,AT4G32460,AT4G39640,AT5G67160,AT1G15790,AT1G50730,AT3G27160,AT4G36640,AT5G41080,AT2G03870,AT5G27990,AT2G28605,AT3G26740,AT5G36090,AT5G45680 YANT_2-6_BOUND-FDR_UP Up in 2-6, bound (by fdr) (Table S3 PubmedID:20675573) AT3G16650,AT4G30490,AT2G41990,AT2G43620,AT2G40435,AT3G07450,AT5G06530,AT2G40130,AT5G54470,AT1G50290,AT4G17670,AT4G19240,AT5G64870,AT1G73805,AT3G12320,AT1G49230,AT2G45660,AT2G14210,AT4G00730,AT1G35730,AT5G49360,AT5G67060,AT1G19640,AT3G05690,AT1G13260,AT2G28550,AT3G58780,AT2G42830,AT1G19330,AT5G58900,AT2G15320,AT3G19370,AT3G27770,AT1G03710,AT1G02070,AT5G49120,AT4G04630,AT5G64640,AT4G16490,AT3G04620,AT5G19140,AT4G25420,AT4G01250,AT4G18960,AT5G62000,AT3G25905,AT4G25480,AT1G02205,AT2G42870,AT1G73590,AT1G69295,AT2G48110,AT1G66350,AT4G28560,AT5G67180,AT1G70560,AT4G14130,AT1G24625,AT2G41940,AT1G34750,AT2G26040,AT1G35910,AT2G31980,AT4G16770,AT5G64220,AT1G72500,AT1G29270,AT5G46340,AT5G45160,AT2G45680,AT2G22170,AT2G38970,AT5G07030,AT4G29190,AT1G11050,AT1G11730,AT5G24710,AT5G43680,AT2G35820,AT2G46530,AT1G72320,AT4G08950,AT1G14350,AT4G01120,AT2G22840,AT2G42800,AT3G55980,AT4G26690,AT3G11820,AT2G21650,AT1G27730 YANT_2-6_BOUND-FDR_DN Down in 2-6, bound (by fdr) (Table S3 PubmedID:20675573) AT1G64380,AT1G12080,AT4G13210,AT4G21870,AT3G50270,AT1G23390,AT4G24050,AT4G25170,AT1G71050,AT1G75880,AT1G69530,AT1G78960,AT4G36870,AT2G38110,AT3G45140,AT5G15310,AT1G15360,AT2G25150,AT3G52480,AT3G55710,AT5G60400,AT1G60540,AT4G27240,AT2G26520,AT5G61590,AT5G04020,AT5G44680,AT5G02890,AT5G13400,AT4G02540,AT1G02190,AT4G36920,AT1G80100,AT3G55560,AT3G50700,AT5G20250,AT3G12610,AT4G03400,AT4G24510,AT4G37540,AT1G22530,AT2G38060,AT1G09570,AT1G14280,AT4G20260,AT1G61580,AT2G33380,AT1G53090,AT1G04110,AT1G07260,AT4G34410,AT3G60690,AT3G43960,AT2G18470,AT2G16760,AT5G14550,AT1G75580,AT1G19650,AT3G47680,AT1G68710,AT3G06750,AT5G62360,AT1G51460,AT3G63460,AT3G29575,AT5G13790,AT1G71030,AT5G01600,AT3G45780,AT3G26090,AT1G53160,AT5G05860,AT2G47260,AT2G18550 DENG_ANTI-H4R3ME2S_SYM10_SYM11_DIFF Diff-Proteins detected with the Anti-H4R3me2s (ab5823), SYM10, and SYM11 (Table S1 PubmedID:20956294) AT4G39260,AT4G15560,AT1G78570,AT3G46740,AT5G04590,AT4G19170,AT3G09260,AT1G04510,AT3G10050,AT3G11830,AT2G15620,AT4G01690,AT2G27680,AT2G40490,AT5G18170,AT2G17265,AT5G08280,AT3G18130,AT4G35250,AT1G03630,AT3G09720,AT1G09750,AT3G14210,AT2G21660,AT1G02920,AT3G04120 DENG_ATPRMT5-MUTANT_DIFF Diff-List of genes with splicing defects in atprmt5 mutants (Table S3 PubmedID:20956294) AT1G02610,AT1G03210,AT1G04440,AT1G05200,AT1G06690,AT1G08380,AT1G08640,AT1G09010,AT1G11360,AT1G13440,AT1G14030,AT1G15125,AT1G15180,AT1G15820,AT1G15980,AT1G16470,AT1G16960,AT1G19130,AT1G19570,AT1G20560,AT1G20693,AT1G21065,AT1G22740,AT1G23130,AT1G25380,AT1G25520,AT1G27320,AT1G28340,AT1G29120,AT1G29400,AT1G29660,AT1G30630,AT1G32090,AT1G32200,AT1G32740,AT1G44770,AT1G44910,AT1G49670,AT1G50440,AT1G52710,AT1G53590,AT1G54170,AT1G54260,AT1G54450,AT1G55310,AT1G56200,AT1G59750,AT1G63490,AT1G63880,AT1G64650,AT1G65410,AT1G67720,AT1G68060,AT1G68190,AT1G69935,AT1G70820,AT1G71440,AT1G71720,AT1G73660,AT1G73920,AT1G73990,AT1G74670,AT1G75380,AT1G76180,AT1G76570,AT1G76850,AT1G78900,AT1G78920,AT1G79040,AT1G79990,AT1G80560,AT2G01460,AT2G05100,AT2G06025,AT2G07360,AT2G13360,AT2G15970,AT2G16750,AT2G17320,AT2G17340,AT2G19080,AT2G20580,AT2G20890,AT2G22010,AT2G25710,AT2G26250,AT2G26770,AT2G28550,AT2G28880,AT2G28900,AT2G30600,AT2G31580,AT2G33040,AT2G33830,AT2G34260,AT2G34720,AT2G35060,AT2G35370,AT2G35630,AT2G35880,AT2G37025,AT2G41090,AT2G41705,AT2G42220,AT2G42320,AT2G43560,AT2G45540,AT2G46180,AT2G47390,AT2G47940,AT3G01150,AT3G01480,AT3G01490,AT3G02070,AT3G02600,AT3G04810,AT3G05910,AT3G05970,AT3G06650,AT3G06670,AT3G08510,AT3G08840,AT3G10030,AT3G10060,AT3G10520,AT3G10740,AT3G10940,AT3G11397,AT3G11800,AT3G11880,AT3G13870,AT3G14210,AT3G14420,AT3G14660,AT3G14860,AT3G15450,AT3G16420,AT3G16480,AT3G16857,AT3G18040,AT3G18080,AT3G18390,AT3G22200,AT3G22210,AT3G23030,AT3G23255,AT3G23980,AT3G24160,AT3G24515,AT3G24570,AT3G26740,AT3G27690,AT3G42790,AT3G43220,AT3G45780,AT3G46010,AT3G46060,AT3G47160,AT3G48110,AT3G48360,AT3G48820,AT3G50240,AT3G51630,AT3G51820,AT3G52155,AT3G52340,AT3G52560,AT3G52720,AT3G53460,AT3G53920,AT3G58760,AT3G59778,AT3G61210,AT3G61470,AT3G62040,AT3G62750,AT3G63140,AT3G63520,AT4G01690,AT4G02120,AT4G08310,AT4G10340,AT4G11420,AT4G14220,AT4G14385,AT4G16990,AT4G18970,AT4G19420,AT4G19860,AT4G20380,AT4G21470,AT4G22570,AT4G24750,AT4G25170,AT4G26270,AT4G27520,AT4G27650,AT4G28080,AT4G30580,AT4G30993,AT4G31040,AT4G31340,AT4G32150,AT4G32960,AT4G33000,AT4G33625,AT4G34090,AT4G34240,AT4G35830,AT4G36195,AT4G36250,AT4G36540,AT4G37300,AT4G37790,AT4G38260,AT4G39260,AT4G39730,AT4G40030,AT5G02940,AT5G03300,AT5G03730,AT5G04490,AT5G05010,AT5G06750,AT5G06970,AT5G08650,AT5G10070,AT5G10480,AT5G10860,AT5G10940,AT5G11170,AT5G11800,AT5G11950,AT5G11980,AT5G14120,AT5G14740,AT5G16120,AT5G17440,AT5G17920,AT5G18650,AT5G19180,AT5G19210,AT5G19500,AT5G22340,AT5G23060,AT5G23150,AT5G24165,AT5G24314,AT5G24490,AT5G24735,AT5G25265,AT5G26000,AT5G26610,AT5G26751,AT5G26830,AT5G27620,AT5G32450,AT5G38690,AT5G42030,AT5G42080,AT5G42765,AT5G42950,AT5G43900,AT5G43930,AT5G44020,AT5G44090,AT5G44100,AT5G44650,AT5G46110,AT5G48385,AT5G49730,AT5G49740,AT5G50160,AT5G50850,AT5G51140,AT5G53460,AT5G56850,AT5G57630,AT5G58800,AT5G63000,AT5G63905,AT5G64440,AT5G64860,AT5G65670,AT5G66410,AT5G66420,AT5G66570,AT5G67385 SOZZANI_SHR_TIME-COURSE_DIFF Genes differentially regulated in the SHR microarray time course (Table S1 PubmedID:20596025) AT4G18780,AT1G05260,AT1G07160,AT5G51890,AT1G14730,AT5G48850,AT4G25560,AT2G40750,AT5G06720,AT4G11290,AT3G49690,AT5G48430,AT4G02410,AT1G20850,AT4G16820,AT4G35350,AT3G59710,AT5G01360,AT5G40980,AT2G40180,AT4G18170,AT5G17980,AT4G26200,AT4G02700,AT4G28460,AT2G43620,AT1G61560,AT5G12340,AT1G80450,AT5G06730,AT1G72800,AT1G78020,AT1G56430,AT1G05200,AT3G59370,AT4G08780,AT4G18010,AT1G64700,AT4G28140,AT3G28600,AT2G16660,AT1G14540,AT2G30400,AT3G01500,AT1G69080,AT1G08050,AT4G20780,AT1G14550,AT1G13340,AT2G31900,AT4G08770,AT5G25440,AT2G20880,AT1G22710,AT1G76700,AT5G52310,AT4G05100,AT5G61890,AT3G49760,AT4G38420,AT2G47190,AT1G67110,AT4G14380,AT4G21680,AT5G62360,AT1G22810,AT1G28600,AT3G51680,AT5G45800,AT3G53150,AT1G74360,AT1G58340,AT4G24130,AT1G33700,AT3G49780,AT1G60030,AT1G78120,AT4G40080,AT3G21770,AT2G02990,AT1G77120,AT4G14650,AT1G70130,AT5G01540,AT1G08920,AT2G26380,AT1G26730,AT1G12200,AT1G64780,AT1G66090,AT3G45960,AT3G47420,AT1G09950,AT4G34950,AT5G28630,AT1G02360,AT5G60270,AT1G62990,AT1G71880,AT4G22610,AT5G62070,AT1G69890,AT4G30350,AT3G43270,AT4G36430,AT1G69850,AT5G05440,AT1G58420,AT4G36710,AT5G59510,AT5G19040,AT3G54150,AT1G78110,AT5G27000,AT3G63380,AT1G52200,AT2G35980,AT4G22620,AT5G02230,AT3G16330,AT2G36650,AT1G02400,AT4G01450,AT4G37710,AT1G30370,AT5G24800,AT2G23620,AT5G01830,AT3G22910,AT2G17220,AT5G43380,AT2G35290,AT3G06490,AT4G21870,AT2G28510,AT2G31940,AT3G13650,AT5G52680,AT5G13200,AT3G55420,AT5G43890,AT4G14130,AT1G69790,AT5G05190,AT5G16010,AT2G43140,AT1G52890,AT2G33310,AT1G71960,AT5G46590,AT1G70750,AT5G55250,AT3G27200,AT3G17690,AT1G70940,AT5G06740,AT3G26330,AT3G59690,AT2G25460,AT1G69930,AT1G63180,AT4G26010,AT3G01420,AT3G07390,AT1G62320,AT5G52400,AT2G44210,AT2G26170,AT5G55090,AT5G25810,AT5G07460,AT2G26390,AT4G01250,AT2G31110,AT1G31290,AT1G23090,AT4G35480,AT2G15340,AT1G30040,AT1G71697,AT5G05600,AT3G28580,AT5G53590,AT1G01010,AT5G61560,AT4G12000,AT5G37990,AT1G28110,AT3G63010,AT1G22985,AT3G28210,AT5G01550,AT2G14900,AT5G18490,AT1G23010,AT4G15340,AT5G45970,AT1G19020,AT4G33905,AT4G03510,AT1G17340,AT2G03370,AT5G66070,AT1G51790,AT1G14480,AT3G48450,AT3G52400,AT5G24110,AT2G43820,AT1G75500,AT1G75590,AT5G38020,AT5G13220,AT2G45680,AT4G19200,AT1G55450,AT2G30550,AT5G47070,AT3G51660,AT2G01950,AT1G61667,AT4G27730,AT1G76070,AT1G79310,AT4G37770,AT2G25790,AT4G18280,AT4G20210,AT3G19970,AT5G03610,AT1G43160,AT5G66640,AT2G17660,AT5G59490,AT2G15760,AT1G15520,AT4G29100,AT5G17850,AT2G18210,AT1G14370,AT4G38580,AT5G24030,AT5G17420,AT2G29750,AT5G59730,AT1G77690,AT3G15500,AT2G29995,AT5G01380,AT4G31550,AT2G35760,AT1G62840,AT1G05340,AT5G20230,AT1G02860,AT1G16670,AT2G03200,AT1G15640,AT4G20860,AT5G17650,AT2G47950,AT3G55470,AT1G16850,AT4G01680,AT2G33530,AT3G16920,AT1G30700,AT5G03350,AT1G17750,AT2G44300,AT1G24530,AT2G27310,AT1G63090,AT2G40330,AT2G37430,AT5G67080,AT4G17230,AT1G60730,AT4G15120,AT1G68795,AT5G22570,AT5G59090,AT2G18690,AT2G27660,AT5G64870,AT1G19300,AT5G01750,AT2G46150,AT1G13195,AT1G07240,AT5G62520,AT2G32140,AT2G29450,AT5G62150,AT5G08240,AT4G15480,AT5G24270,AT1G02310,AT1G05300,AT2G30250,AT4G36010,AT5G14700,AT3G16470,AT1G71695,AT1G77020,AT5G21105,AT3G21690,AT1G25530,AT1G71450,AT1G56060,AT3G59350,AT4G37370,AT5G44160,AT2G47890,AT3G01830,AT5G62420,AT5G27420,AT1G79620,AT2G39310,AT5G54170,AT1G06520,AT5G64510,AT2G29460,AT3G51330,AT2G23560,AT1G25400,AT1G12010,AT5G06760,AT4G39070,AT2G34500,AT1G07090,AT1G10370,AT2G29440,AT3G01510,AT4G36610,AT5G39785,AT1G72520,AT1G17420,AT2G02130,AT5G49520,AT2G39420,AT4G08850,AT5G53050,AT1G01140,AT5G60200,AT4G31100,AT4G39640,AT1G75860,AT2G39200,AT5G45110,AT4G34150,AT1G11100,AT2G36640,AT5G56980,AT5G03960,AT4G28720,AT3G09020,AT1G28380,AT3G10300,AT3G13730,AT2G24850,AT4G34400,AT4G39190,AT1G28480,AT4G26320,AT4G23690,AT3G14660,AT1G02450,AT5G54040,AT2G16890,AT4G28350,AT3G59080,AT1G17145,AT2G13820,AT1G20310,AT1G43910,AT5G24140,AT5G58690,AT2G22860,AT4G16370,AT5G57510,AT4G24960,AT5G35580,AT3G50970,AT4G32880,AT2G04040,AT4G33920,AT1G52190,AT5G39050,AT5G51260,AT2G37710,AT1G73510,AT3G48185,AT4G30430,AT5G24600,AT4G02590,AT1G73080,AT5G48170,AT5G42650,AT5G57350,AT1G72430,AT3G50660,AT4G18910,AT1G08315,AT1G20450,AT2G34930,AT1G72610,AT2G40970,AT1G76970,AT2G43680,AT1G10390,AT2G01300,AT2G35270,AT5G16600,AT4G01026,AT2G23610,AT1G44350,AT4G12120,AT2G41730,AT3G56480,AT1G13110,AT1G61360,AT1G08800,AT1G70890,AT2G17840,AT1G01340,AT5G11650,AT3G02800,AT1G63720,AT4G00330,AT5G03760,AT3G05360,AT3G05320,AT3G23730,AT1G44050,AT3G22570,AT1G15430,AT5G12010,AT2G16900,AT5G57480,AT4G35180,AT2G43050,AT3G21560,AT1G09960,AT1G60390,AT4G25640,AT3G50630,AT5G26660,AT3G17410,AT2G32150,AT1G45145,AT5G04120,AT4G22590,AT1G74010,AT2G38240,AT5G45380,AT1G64380,AT3G04010,AT5G13080,AT4G14680,AT5G44480,AT3G11020,AT2G40480,AT1G19380,AT4G18430,AT5G60350,AT1G20440,AT1G05100,AT4G34590,AT3G53620,AT3G54120,AT1G05700,AT1G10360,AT5G57110,AT4G30530,AT5G01820,AT3G56980,AT3G05580,AT4G04840,AT5G67280,AT2G23340,AT4G19230,AT4G24380,AT5G67160,AT3G53450,AT2G28710,AT4G35985,AT5G57710,AT4G15610,AT5G19110,AT4G39030,AT2G44370,AT4G25380,AT2G17710,AT3G26610,AT5G49630,AT5G13900,AT1G13210,AT4G01700,AT3G18830,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AT1G53590,AT5G15700,AT4G38710,AT1G67320,AT2G20670,AT4G21270,AT5G02710,AT5G38300,AT5G16850,AT5G45300,AT5G42370,AT4G12540,AT4G15530,AT3G56430,AT3G01410,AT4G25260,AT5G37570,AT5G39680,AT1G50380,AT3G01330,AT1G28760,AT3G23880,AT1G54680,AT5G39710,AT2G22100,AT5G50890,AT5G57040,AT5G49360,AT3G18100,AT3G14900,AT1G73400,AT2G42120,AT5G08400,AT1G21690,AT3G04710,AT1G64450,AT4G17600,AT1G23790,AT1G64350,AT5G63830,AT2G24440,AT2G38000,AT5G24900,AT5G62260,AT2G31170,AT1G79030,AT5G39350,AT1G54850,AT3G19960,AT2G20850,AT5G04280,AT4G33550,AT1G72850,AT1G50000,AT3G54630,AT3G51280,AT3G57160,AT4G27400,AT1G58180,AT4G22140,AT5G44280,AT5G66000,AT1G23000,AT2G21070,AT1G01970,AT3G23325,AT3G53460,AT1G60650,AT2G29760,AT4G12750,AT5G35740,AT2G27010,AT1G80480,AT2G27980,AT4G26780,AT3G20020,AT2G46830,AT1G25450,AT3G56100,AT4G00980,AT3G21060,AT4G20320,AT1G49870,AT5G20850,AT2G39570,AT5G59500,AT3G30775,AT1G01170,AT3G55800,AT3G15560,AT3G58100,AT4G35200,AT2G41070,AT3G60510,AT5G51380,AT3G19200,AT5G37530,AT3G06460,AT5G45940,AT4G26660,AT5G52850,AT1G74260,AT1G14910,AT2G39910,AT5G15280,AT3G58520,AT5G63630,AT4G39675,AT1G52080,AT3G19040,AT3G03710,AT1G03510,AT1G78430,AT5G59170,AT3G57040,AT2G24590,AT1G01160,AT5G64180,AT1G51190,AT4G20740,AT2G23530,AT5G16250,AT3G51720,AT2G04500,AT1G31010,AT2G47990,AT5G57050,AT2G39140,AT3G54970,AT5G06680,AT3G02640,AT2G25840,AT3G51870,AT4G38100,AT5G55670,AT2G03090,AT1G69050,AT5G66750,AT4G38440,AT5G43960,AT1G15040,AT3G58650,AT3G57860,AT1G63260,AT1G56690,AT1G34380,AT1G75440,AT3G02710,AT4G25240,AT5G02770,AT1G20300,AT5G18670,AT1G64110,AT5G62710,AT3G18000,AT4G29540,AT3G57000,AT1G19520,AT4G31850,AT5G48590,AT3G63190,AT5G43790,AT3G12770,AT1G48650,AT2G41720,AT1G02970,AT5G45700,AT5G26180,AT3G17830,AT3G63510,AT4G13030,AT4G02390,AT5G10070,AT5G65120,AT1G18680,AT5G61030,AT3G55010,AT2G32610,AT1G08560,AT3G60530,AT1G13270,AT1G26840,AT2G35030,AT5G02020,AT3G19430,AT3G01800,AT5G11240,AT5G40030,AT2G42850,AT1G24310,AT3G06980,AT1G30530,AT5G63920,AT5G55220,AT5G01590,AT2G33560,AT3G04770,AT5G02490,AT5G03870,AT5G48310,AT4G01730,AT2G21800,AT5G65900,AT4G14200,AT2G16270,AT1G01240,AT2G04030,AT3G51750,AT5G06240,AT2G26930,AT3G25890,AT4G20440,AT2G01210,AT1G60770,AT3G28670,AT1G02370,AT5G51590,AT2G03780,AT3G15150,AT1G13410,AT1G55540,AT3G15000,AT4G35750,AT2G29570,AT5G63950,AT3G42630,AT5G67630,AT3G52170,AT3G59900,AT3G03060,AT5G27660,AT2G39880,AT1G30880,AT2G19430,AT5G25090,AT2G29260,AT5G07630,AT5G67270,AT1G16830,AT2G23360,AT2G18350,AT2G37400,AT2G31190,AT1G21840,AT3G53900,AT1G65560,AT2G36730,AT3G16320,AT2G26470,AT4G39900,AT5G13460,AT5G18820,AT5G23070,AT4G38010,AT5G51600,AT1G45110,AT5G14580,AT2G20710,AT3G62920,AT1G56050,AT5G07900,AT5G48600,AT5G64390,AT1G31335,AT3G48425,AT2G27840,AT3G12860,AT3G27690,AT3G53940,AT2G13360,AT2G17250,AT1G09800,AT1G65570,AT3G04260,AT1G56020,AT1G19900,AT4G38050,AT2G07690,AT4G17000,AT5G37010,AT3G47460,AT5G19300,AT4G23510,AT5G59750,AT1G28520,AT1G05440,AT2G37020,AT5G14450,AT3G63210,AT5G60150,AT3G42860,AT4G37890,AT1G08410,AT5G26860,AT3G55660,AT5G12080,AT3G47950,AT1G77460,AT4G17960,AT2G37540,AT3G05070,AT5G38840,AT4G04880,AT1G26665,AT1G11240,AT1G32440,AT1G01510,AT4G14000,AT5G37020,AT5G13960,AT3G01790,AT4G05400,AT1G59760,AT1G54650,AT4G15010,AT1G73490,AT3G51270,AT5G64010,AT1G10522,AT5G17160,AT3G56690,AT3G05190,AT1G15700,AT1G51730,AT2G35720,AT5G45600,AT1G56670,AT1G17690,AT1G16650,AT1G10240,AT1G04870,AT3G15590,AT2G47420,AT1G13160,AT4G38890,AT3G54500,AT3G16870,AT5G04910,AT1G08610,AT1G28210,AT5G42820,AT5G04320,AT5G14050,AT4G29170,AT1G60080,AT3G07630,AT1G50920,AT5G01400,AT5G60730,AT1G06010,AT1G15340,AT2G13540,AT3G20260,AT3G44050,AT1G71340,AT2G17670,AT3G58660,AT3G16780,AT5G24840,AT3G11450,AT5G11450,AT4G19710,AT3G06730,AT1G19525,AT2G48120,AT1G59990,AT3G53320,AT1G61010,AT5G47410,AT2G36400,AT3G49180,AT4G11790,AT4G02750,AT1G44900,AT4G15640,AT1G17040,AT1G30240,AT5G16040,AT2G30580,AT1G72090,AT2G34780,AT1G69220,AT5G66170,AT5G01770,AT1G06670,AT5G51100,AT1G34770,AT3G57660,AT1G78650,AT2G37560,AT2G06990,AT1G80850,AT1G01920,AT4G31290,AT5G46280,AT1G80560,AT1G26820,AT3G14190,AT1G31360,AT1G19485,AT3G02320,AT5G05540,AT2G42290,AT3G49250,AT5G60870,AT3G12670,AT5G61770,AT1G71260,AT2G34570,AT5G06340,AT3G52030,AT3G49990,AT3G55400,AT2G41500,AT2G34520,AT4G38380,AT3G24080,AT3G16010,AT1G59940,AT2G26760,AT5G52380,AT4G02800,AT5G52820,AT5G08565,AT1G31970,AT4G36930,AT4G28200,AT1G02050,AT1G15290,AT4G34910,AT1G72050,AT1G21190,AT4G31430,AT1G69390,AT5G07590,AT3G04340,AT1G06790,AT2G43770,AT5G17780,AT2G32500,AT1G79890,AT1G08580,AT5G55520,AT4G17610,AT3G18030,AT2G22400,AT5G01780,AT1G22270,AT5G41190,AT5G15570,AT1G77800,AT4G39630,AT5G15520,AT1G79880,AT3G19590,AT1G18850,AT5G09380,AT5G11460,AT1G75200,AT5G24670,AT1G07970,AT4G02400,AT2G19170,AT3G22670,AT1G55810,AT5G38110,AT4G04180,AT5G41880,AT1G32490,AT1G10320,AT2G18900,AT1G48570,AT3G03130,AT3G22780,AT2G45440,AT5G59460,AT3G16310,AT4G31210,AT3G21110,AT5G27110,AT4G24610,AT4G32720,AT3G18940,AT1G64880,AT3G06850,AT4G01800,AT1G31660,AT2G32590,AT5G09840,AT4G31810,AT2G23380,AT3G24440,AT5G01230,AT5G66540,AT3G07750,AT1G53460,AT4G23860,AT5G38720,AT5G43080,AT5G15810,AT5G54910,AT3G25100,AT5G20040,AT5G50310,AT5G55300,AT1G20230,AT4G13640,AT3G56900,AT1G10490,AT1G64490,AT1G64600,AT1G18040,AT3G05060,AT3G59630,AT4G40000,AT1G24610,AT2G02170,AT3G61610,AT4G16155,AT1G63100,AT3G27520,AT5G38890,AT2G44980,AT3G21740,AT1G30960,AT4G02150,AT1G29900,AT5G61310,AT5G61400,AT4G34740,AT1G03687,AT2G37790,AT3G02490,AT5G02010,AT2G44640,AT3G49470,AT2G44020,AT5G11510,AT3G49810,AT4G14695,AT4G35570,AT5G61300,AT2G35750,AT3G19840,AT2G18330,AT1G62150,AT3G19440,AT1G71850,AT1G66820,AT3G63130,AT4G16670,AT5G56380,AT3G12080,AT5G23310,AT1G09760,AT2G27590,AT1G33060,AT2G16230,AT4G26760,AT1G15250,AT5G44560,AT3G10780,AT1G67910,AT2G38810,AT1G06590,AT1G48950,AT5G49010,AT3G18760,AT4G36180,AT2G37420,AT4G29510,AT5G24630,AT2G04540,AT4G10300,AT3G55510,AT5G65460,AT3G05130,AT1G60230,AT1G15440,AT1G79560,AT2G34750,AT5G09420,AT4G02070,AT4G37630,AT3G62760,AT2G47790,AT1G49910,AT1G31860,AT1G14970,AT3G48110,AT3G49240,AT3G06040,AT3G12270,AT4G02220,AT5G17430,AT3G49640,AT1G17530,AT3G10310,AT1G63660,AT5G42540,AT3G56990,AT2G22840,AT4G14330,AT2G24060,AT3G15450,AT1G50490,AT1G04020,AT4G22280,AT4G05410,AT1G16330,AT3G10940,AT2G16780,AT1G72670,AT5G48940,AT4G09140,AT2G40700,AT2G18220,AT5G12980,AT5G61060,AT2G25060,AT3G56330,AT5G57120,AT1G48560,AT5G62170,AT5G48110,AT5G06180,AT5G55280,AT5G14850,AT2G20020,AT5G63010,AT1G26270,AT3G55080,AT4G15830,AT3G27550,AT1G60560,AT5G08020,AT2G45730,AT2G34357,AT5G08620,AT3G55605,AT3G47450,AT3G20710,AT3G11620,AT3G49000,AT3G13030,AT3G20150,AT2G42130,AT4G10890,AT5G19310,AT4G19985,AT1G22970,AT1G20370,AT5G28770,AT3G56870,AT1G25260,AT4G08590,AT3G63400,AT1G50840,AT4G33400,AT3G52110,AT3G55280,AT1G15480,AT5G46920,AT4G27010,AT5G39840,AT1G52930,AT2G25355,AT5G47460,AT2G21790,AT4G30800,AT4G28706,AT5G42060,AT4G39620,AT4G07410,AT1G06960,AT1G54440,AT1G11720,AT1G63980,AT4G13750,AT5G50170,AT5G06550,AT1G48580,AT2G28600,AT1G50620,AT5G57980,AT5G57170,AT3G17360,AT3G19860,AT2G34200,AT5G48360,AT1G79470,AT5G27430,AT2G26070,AT4G25730,AT5G23910,AT5G33300,AT1G47340,AT1G22460,AT5G05510,AT4G37490,AT5G24490,AT4G23750,AT1G23280,AT5G40480,AT3G21540,AT4G05190,AT5G67240,AT1G26660,AT1G22660,AT1G03310,AT3G11964,AT4G32910,AT5G46840,AT3G07440,AT3G29280,AT3G57140,AT5G06800,AT4G28950,AT4G33990,AT3G62910,AT2G03280,AT5G58370,AT1G01110,AT1G79220,AT1G63810,AT1G72320,AT3G44750,AT1G02690,AT4G15850,AT4G37740,AT2G19670,AT1G66250,AT3G62620,AT3G07530,AT3G02110,AT1G04610,AT5G27820,AT4G35720,AT5G01910,AT2G28620,AT5G03770,AT5G65860,AT3G55060,AT1G06720,AT1G69200,AT1G49540,AT2G19385,AT4G37090,AT5G67100,AT4G14660,AT1G02150,AT1G30820,AT5G12410,AT2G26180,AT4G28310,AT1G69210,AT1G03360,AT1G61990,AT3G10690,AT5G47455,AT3G46210,AT2G42110,AT1G06310,AT3G06530,AT1G10330,AT5G42240,AT3G07590,AT4G30680,AT3G16370,AT5G18440,AT2G25880,AT2G34900,AT1G23410,AT5G41650,AT3G26410,AT3G57060,AT3G58470,AT5G48100,AT3G62050,AT2G25590,AT3G08770,AT1G72250,AT3G59470,AT4G31840,AT4G03100,AT2G18520,AT4G19130,AT5G25475,AT5G38730,AT2G45270,AT3G51740,AT5G23690,AT4G02990,AT1G76540,AT5G62980,AT1G13810,AT1G73177,AT1G77550,AT4G26870,AT5G46740,AT2G22260,AT1G03780,AT5G06210,AT3G13800,AT3G09700,AT5G02180,AT5G44780,AT3G01370,AT1G34160,AT4G37110,AT3G15240,AT2G39670,AT2G16070,AT4G27380,AT1G65370,AT5G62190,AT5G37630,AT5G54370,AT5G10510,AT5G16750,AT2G07170,AT3G54090,AT2G33680,AT5G53900,AT1G18370,AT4G09550,AT4G02790,AT3G02820,AT2G25900,AT1G59540,AT5G02150,AT1G04900,AT2G17975,AT5G16310,AT3G11520,AT1G09900,AT2G25640,AT4G29360,AT4G02820,AT5G18570,AT5G27400,AT1G67120,AT4G15780,AT4G36580,AT2G20490,AT1G02730,AT1G47270,AT3G51290,AT3G66652,AT2G31725,AT2G36200,AT1G53140,AT1G17460,AT5G02580,AT3G61100,AT4G12740,AT1G26260,AT3G16000,AT2G36010,AT4G26600,AT2G28450,AT1G48550,AT5G19670,AT2G17900,AT1G26330,AT1G03530,AT1G28530,AT1G68990,AT3G08740,AT3G43210,AT4G32970,AT2G46110,AT3G59550,AT5G23380,AT3G06030,AT5G05560,AT5G16930,AT4G31360,AT2G37450,AT3G24320,AT2G22610,AT4G17540,AT5G02370,AT1G34355,AT5G08610,AT2G17620,AT2G28070,AT3G15140,AT4G28020,AT4G20350,AT5G51560,AT1G67630,AT5G55140,AT2G40960,AT3G02120,AT4G02560,AT1G08840,AT4G05520,AT5G36950,AT1G51380,AT3G03630,AT5G49560,AT5G25800,AT3G57940,AT1G23160,AT2G34640,AT4G32830,AT5G44785,AT4G16700,AT5G60630,AT4G23800,AT1G26470,AT2G46200,AT4G34360,AT4G00200,AT1G72040,AT4G37170,AT1G72820,AT3G14890,AT2G44190,AT1G21060,AT2G45490,AT1G77630,AT2G42840,AT5G52950,AT1G62500,AT3G20240,AT2G23410,AT3G15720,AT1G69440,AT1G79490,AT1G31760,AT4G13690,AT3G23670,AT1G03270,AT1G53200,AT1G78180,AT5G13840,AT1G27880,AT5G62550,AT2G04530,AT3G27330,AT1G20930,AT1G76310,AT2G14460,AT4G14150,AT1G44110,AT1G11420,AT5G60930,AT4G09730,AT3G23890,AT1G44318,AT5G55820,AT5G08600,AT4G35620,AT5G25590,AT3G48250,AT4G37380,AT4G24890,AT3G13180,AT1G22880,AT1G50060,AT3G03450,AT5G15725,AT5G15510,AT5G62960,AT1G09450,AT3G52180,AT1G55020,AT2G15630,AT5G40320,AT1G10780,AT3G15357,AT2G47680,AT2G21050,AT5G12220,AT1G16070,AT1G80370,AT3G18524,AT4G23540,AT5G17960 SOZZANI_SCR_TIME-COURSE_DIFF Genes differentially regulated in the SCR microarray time course (Table S2 PubmedID:20596025) AT3G26200,AT1G67980,AT4G11650,AT1G26380,AT5G57220,AT1G69920,AT2G43000,AT1G21130,AT3G60120,AT3G54150,AT3G60140,AT4G01010,AT1G18570,AT2G30750,AT2G46750,AT3G28580,AT3G26830,AT1G21100,AT4G15530,AT3G49620,AT1G12200,AT1G33030,AT4G08770,AT3G21720,AT3G16530,AT2G04040,AT3G60420,AT2G40750,AT1G64160,AT4G23700,AT5G52750,AT2G29340,AT1G74080,AT5G51190,AT4G33050,AT2G39400,AT5G22300,AT2G18360,AT1G72920,AT1G73260,AT4G25560,AT4G36670,AT5G64000,AT5G61010,AT2G40180,AT1G74590,AT4G37290,AT2G43510,AT5G02780,AT1G10990,AT1G02220,AT1G23730,AT5G26920,AT1G35910,AT2G31945,AT5G22250,AT1G07160,AT1G72900,AT5G22570,AT3G27950,AT4G23030,AT1G21120,AT2G35730,AT1G51420,AT2G33830,AT2G43140,AT5G39580,AT4G35770,AT5G52670,AT1G33590,AT2G33710,AT3G19200,AT1G22180,AT3G63380,AT1G22570,AT4G21680,AT5G20830,AT1G05010,AT3G29810,AT5G13080,AT5G28610,AT3G53160,AT4G11360,AT5G24110,AT1G80180,AT4G15630,AT1G30370,AT1G69890,AT2G15480,AT4G20780,AT3G09390,AT1G76520,AT4G35110,AT4G27830,AT2G28760,AT5G03350,AT5G44820,AT1G61560,AT1G70810,AT2G43570,AT4G38540,AT1G69490,AT3G56400,AT1G23830,AT1G79450,AT1G68450,AT5G27420,AT5G19100,AT4G26470,AT5G24070,AT1G19960,AT4G20000,AT1G53430,AT1G33600,AT4G11370,AT3G53150,AT3G59080,AT3G56710,AT1G25275,AT1G60730,AT5G25170,AT2G41800,AT2G43870,AT2G24600,AT3G11840,AT1G02360,AT1G64610,AT3G49210,AT2G32020,AT3G47380,AT1G06840,AT1G69930,AT4G36880,AT4G19200,AT5G61600,AT5G40780,AT4G23180,AT5G53550,AT1G05700,AT4G25170,AT1G28190,AT2G17640,AT5G62150,AT1G64660,AT1G67810,AT5G40590,AT1G74360,AT5G05140,AT5G11920,AT2G36950,AT4G02700,AT4G01250,AT5G43580,AT5G04340,AT3G18830,AT3G26470,AT4G14220,AT4G25900,AT4G38580,AT5G39610,AT5G37740,AT3G09020,AT5G09800,AT2G17220,AT5G48170,AT2G30140,AT2G44370,AT5G57620,AT5G47050,AT5G25440,AT5G48850,AT5G10520,AT5G14700,AT1G59700,AT1G18590,AT2G47140,AT1G01340,AT5G24600,AT1G35140,AT1G80920,AT1G68240,AT1G07000,AT3G19920,AT5G67450,AT1G11050,AT3G16720,AT2G44210,AT1G34180,AT1G15040,AT5G14470,AT3G59700,AT1G50580,AT4G15120,AT4G17490,AT5G40170,AT2G45920,AT1G13110,AT5G67340,AT2G46650,AT3G52430,AT3G48450,AT2G34650,AT3G46600,AT1G66090,AT4G37295,AT1G31650,AT2G17710,AT1G23010,AT2G01670,AT5G61590,AT5G48175,AT5G59530,AT5G47220,AT1G72360,AT3G19660,AT1G15380,AT1G78410,AT1G14370,AT5G12890,AT3G51920,AT5G07460,AT2G40330,AT4G37330,AT1G61380,AT1G71040,AT2G26870,AT2G28400,AT5G46780,AT1G30530,AT2G18690,AT4G24170,AT2G23450,AT3G19930,AT5G45210,AT3G48460,AT2G37430,AT5G17650,AT3G45640,AT1G68620,AT1G78020,AT4G29610,AT3G21690,AT2G40475,AT5G16900,AT3G09010,AT1G07630,AT4G38550,AT4G18880,AT5G13400,AT2G27270,AT1G58180,AT1G07240,AT4G21400,AT3G53180,AT4G36030,AT3G48360,AT4G36780,AT2G43610,AT5G51070,AT4G18170,AT4G15920,AT5G48570,AT1G15740,AT1G66470,AT2G41700,AT5G18310,AT2G15760,AT1G29270,AT1G23120,AT5G05340,AT4G24040,AT4G23450,AT3G02800,AT4G31980,AT1G45145,AT1G80380,AT2G15490,AT2G27660,AT3G63010,AT3G04720,AT1G71400,AT4G16370,AT2G43500,AT4G16260,AT1G04770,AT4G01026,AT4G05170,AT1G33560,AT1G02860,AT2G43590,AT3G10720,AT5G04720,AT1G80440,AT2G41880,AT5G28630,AT3G57330,AT1G03905,AT5G18490,AT2G15390,AT5G02260,AT1G19025,AT4G39270,AT5G57190,AT2G47130,AT3G20520,AT3G52400,AT2G25735,AT2G39660,AT3G14990,AT3G19553,AT3G24503,AT4G16447,AT5G01950,AT3G54220,AT1G03370,AT4G38360,AT1G07520,AT3G13100,AT3G51430,AT3G50190,AT3G47780,AT1G73800,AT1G54030,AT1G06800,AT1G61360,AT1G72680,AT2G20900,AT1G70420,AT1G27100,AT3G54100,AT3G05360,AT1G63720,AT5G01560,AT4G33980,AT2G38870,AT5G56980,AT1G11310,AT3G50900,AT1G69530,AT3G27580,AT1G63440,AT1G62380,AT3G20300,AT4G36550,AT3G51890,AT2G46400,AT1G73280,AT2G28570,AT1G55110,AT3G19010,AT4G17840,AT1G25500,AT2G35270,AT5G47230,AT1G09970,AT4G35550,AT1G77500,AT2G47160,AT1G52200,AT3G13910,AT2G34080,AT2G31130,AT4G35380,AT2G29995,AT1G48840,AT1G66480,AT4G26070,AT1G74010,AT5G14930,AT3G56200,AT1G23090,AT4G18340,AT2G35736,AT3G47420,AT5G05440,AT1G80340,AT1G17500,AT2G27690,AT2G35930,AT1G74640,AT1G72140,AT2G29460,AT2G48010,AT1G28110,AT3G11580,AT3G43800,AT1G63180,AT5G06730,AT1G01650,AT2G24170,AT4G21510,AT5G02290,AT3G15990,AT3G15770,AT2G46140,AT1G64280,AT4G19660,AT1G27730,AT3G22260,AT1G13990,AT2G29740,AT5G45800,AT3G28450,AT1G06050,AT2G26530,AT1G78270,AT3G53230,AT5G16970,AT2G22120,AT4G26700,AT3G49690,AT2G39650,AT2G20960,AT4G12010,AT5G59940,AT3G55980,AT1G05575,AT2G23320,AT5G24800,AT4G26060,AT1G28050,AT1G30040,AT5G25930,AT5G14150,AT5G10300,AT1G56060,AT3G10960,AT3G11820,AT3G07390,AT5G24090,AT5G04760,AT3G21680,AT1G66160,AT5G54500,AT1G68840,AT3G18370,AT1G14220,AT5G17640,AT5G13820,AT1G22810,AT2G39110,AT1G79360,AT3G15630,AT3G14680,AT5G57510,AT2G21130,AT5G43910,AT2G27830,AT3G55470,AT2G43820,AT4G30790,AT2G35980,AT1G43910,AT1G56300,AT1G19310,AT1G08940,AT5G14760,AT4G16110,AT4G21990,AT2G24550,AT4G23010,AT5G04020,AT2G45680,AT4G30060,AT2G47550,AT3G49360,AT3G57760,AT4G12720,AT1G23550,AT3G26690,AT1G65820,AT2G02390,AT1G34300,AT1G67560,AT2G03730,AT1G47480,AT4G36640,AT4G12120,AT3G25600,AT1G68820,AT5G65240,AT4G14230,AT1G19380,AT5G39090,AT1G24530,AT1G77510,AT1G73500,AT2G24860,AT5G19380,AT2G38470,AT1G27140,AT1G25370,AT1G01120,AT1G23880,AT1G65690,AT5G39050,AT1G49050,AT3G49590,AT1G21910,AT1G77120,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AT3G05320,AT5G59590,AT1G80290,AT5G58070,AT1G50590,AT5G24660,AT5G51260,AT5G19110,AT2G32760,AT2G26260,AT5G14180,AT2G42270,AT4G01070,AT5G44020,AT3G53600,AT2G22680,AT5G56080,AT2G26390,AT5G62020,AT3G55090,AT4G17785,AT2G20240,AT2G21100,AT5G55050,AT1G29510,AT5G13240,AT1G02310,AT3G19430,AT1G72430,AT5G26310,AT2G28510,AT3G28210,AT5G58620,AT1G12740,AT5G05110,AT4G03270,AT3G22880,AT3G04620,AT5G47580,AT5G04250,AT5G58300,AT3G04630,AT4G38060,AT2G42150,AT3G22760,AT1G12010,AT1G68290,AT4G09990,AT1G64740,AT4G27350,AT3G13380,AT3G21700,AT5G47490,AT1G43160,AT1G09080,AT5G24570,AT5G49700,AT2G26440,AT5G12900,AT1G35220,AT5G47240,AT1G75010,AT4G07450,AT2G34140,AT4G37850,AT3G54140,AT1G05370,AT1G27380,AT1G31320,AT1G51620,AT2G19310,AT3G55100,AT4G18050,AT5G04080,AT5G59580,AT2G24560,AT1G75600,AT1G12950,AT2G05170,AT4G25810,AT5G17820,AT5G41000,AT3G51660,AT2G42850,AT1G58340,AT5G01550,AT5G07310,AT4G37710,AT5G13700,AT2G46510,AT1G77660,AT5G52900,AT2G34340,AT1G32970,AT2G37130,AT1G71070,AT3G17690,AT1G05340,AT4G28290,AT3G48520,AT1G10370,AT2G22850,AT1G36070,AT1G10650,AT2G44660,AT1G02980,AT3G21710,AT5G38710,AT4G31780,AT1G32520,AT5G07190,AT3G16330,AT3G55390,AT1G70170,AT1G31290,AT4G04750,AT1G44800,AT2G39130,AT2G37160,AT3G49780,AT1G32860,AT5G40980,AT2G37330,AT1G80240,AT4G27760,AT2G39360,AT5G07990,AT4G12000,AT5G62360,AT4G24380,AT1G12610,AT5G63850,AT5G48070,AT2G27370,AT4G12410,AT5G05540,AT5G12020,AT5G64870,AT2G18600,AT1G76590,AT2G01300,AT5G05180,AT2G39040,AT3G49380,AT4G28640,AT4G33905,AT5G49270,AT4G01575,AT3G18280,AT5G28530,AT3G57360,AT5G06610,AT2G38010,AT1G10360,AT4G37770,AT5G61890,AT4G13460,AT2G38240,AT3G26290,AT2G40260,AT3G46970,AT5G49945,AT2G22530,AT1G08920,AT1G78120,AT1G22980,AT4G28140,AT3G11930,AT5G02480,AT1G54850,AT2G47950,AT1G15580,AT1G53540,AT5G01380,AT3G43250,AT1G75760,AT1G77760,AT2G42430,AT5G11890,AT5G10240,AT5G16010,AT4G13030,AT2G22760,AT1G72200,AT4G24800,AT5G05500,AT3G46660,AT3G43270,AT1G74000,AT1G31950,AT1G60860,AT5G52400,AT4G31100,AT5G65870,AT5G17960,AT5G63760,AT3G42640,AT1G62930,AT1G48430,AT1G22940,AT3G62100,AT3G27690,AT5G27270,AT1G14970,AT4G15570,AT1G70130,AT5G55250,AT5G65280,AT5G23330,AT5G14460,AT5G45920,AT2G27360,AT5G24830,AT4G00820,AT3G12950,AT1G21740,AT1G44090,AT3G27220,AT5G50340,AT1G79540,AT1G22460,AT5G25630,AT5G60200,AT5G57930,AT4G22610,AT2G02990,AT3G46500,AT2G45620,AT1G73180,AT4G02430,AT3G51270,AT5G59250,AT1G33390,AT1G75200,AT5G49360,AT4G15640,AT3G16310,AT2G23360,AT4G29720,AT5G53890,AT2G25420,AT3G59470,AT1G22730,AT5G04790,AT3G03200,AT2G25790,AT2G15790,AT2G28450,AT5G35190,AT3G03950,AT1G59890,AT3G17310,AT1G63610,AT5G51960,AT5G25480,AT5G27950,AT1G06680,AT5G67400,AT5G61410,AT1G15390,AT3G54260,AT3G07860,AT2G32440,AT3G53240,AT1G60160,AT5G20320,AT2G43690,AT2G44270,AT4G10340,AT5G51820,AT4G16700,AT1G75140,AT2G14530,AT3G51750,AT4G16670,AT3G06930,AT1G71180,AT2G45440,AT1G04610,AT1G61010,AT5G47360,AT1G60560,AT5G38140,AT5G48940,AT3G14360,AT5G50300,AT1G68560,AT3G25120,AT5G27400,AT1G02150,AT2G26900,AT5G42720,AT2G48120,AT5G35170,AT3G18160,AT5G26830,AT2G28070,AT5G17490,AT2G37860,AT3G56690,AT3G60660,AT1G13410,AT5G52850,AT3G06040,AT3G14240,AT1G79790,AT4G04670,AT5G28500,AT1G64880,AT5G61020,AT2G25840,AT1G64600,AT1G16520,AT5G11480,AT1G72040,AT3G25940,AT1G54440,AT3G16780,AT4G25340,AT3G02920,AT1G79850,AT2G21440,AT4G14330,AT2G36070,AT5G17270,AT1G70710,AT5G22330,AT5G23690,AT3G25400,AT5G15520,AT1G73177,AT5G63950,AT3G59840,AT3G62620,AT3G20710,AT3G28760,AT4G38750,AT1G69070,AT2G45860,AT1G64220,AT2G17670,AT2G20585,AT1G55490,AT1G03360,AT3G58690,AT5G16930,AT3G16810,AT5G13510,AT3G44590,AT5G04810,AT5G54180,AT5G47110,AT4G28200,AT3G58830,AT5G65120,AT5G50310,AT5G56740,AT2G37600,AT1G77720,AT1G23100,AT3G12270,AT1G54690,AT3G18110,AT5G66470,AT5G40480,AT5G39960,AT5G01770,AT5G59240,AT3G21110,AT2G03780,AT3G57490,AT3G23940,AT4G37200,AT4G16390,AT3G24430,AT3G13674,AT3G47450,AT2G25640,AT2G36200,AT2G31660,AT2G37990,AT1G50840,AT2G45280,AT4G37130,AT2G05120,AT5G11240,AT1G71260,AT4G36930,AT2G19930,AT5G62710,AT1G01370,AT2G29760,AT5G22840,AT2G29890,AT5G11690,AT1G06270,AT3G05060,AT3G53940,AT1G77590,AT3G61620,AT1G30240,AT4G31210,AT4G00370,AT2G44640,AT1G12370,AT5G51350,AT1G49910,AT3G06530,AT5G44785,AT1G33040,AT3G21060,AT3G62030,AT3G26410,AT1G15660,AT4G08590,AT1G67320,AT3G13940,AT4G39120,AT3G66652,AT5G17240,AT4G24890,AT3G16150,AT2G17250,AT4G31140,AT4G38010,AT5G26790,AT3G63250,AT2G27775,AT1G48560,AT5G55820,AT5G01230,AT5G23070,AT3G48250,AT2G26930,AT1G59990,AT1G79520,AT2G41720,AT4G34290,AT3G20150,AT2G47990,AT3G01160,AT2G19170,AT2G01120,AT5G52380,AT3G09720,AT5G50170,AT3G58660,AT5G58250,AT3G19300,AT1G70200,AT5G48010,AT5G66230,AT1G04190,AT4G30800,AT5G53070,AT1G63810,AT3G02650,AT4G04790,AT3G21300,AT5G23570,AT2G02500,AT3G42660,AT5G06180,AT1G03100,AT2G31190,AT5G13520,AT5G05510,AT5G48030,AT1G15220,AT3G49960,AT3G24080,AT4G15850,AT5G08320,AT2G18220,AT2G40550,AT5G23460,AT4G25730,AT5G55280,AT3G56870,AT4G10620,AT2G33820,AT4G19130,AT5G48000,AT1G60080,AT3G15560,AT3G05130,AT5G18140,AT5G04620,AT1G28530,AT3G07770,AT3G20230,AT2G29260,AT5G47460,AT4G25420,AT5G61770,AT3G21480,AT2G31890,AT1G77470,AT4G05410,AT3G13880,AT5G54690,AT5G58480,AT3G13860,AT1G32990,AT1G16220,AT1G53200,AT1G31335,AT1G65420,AT5G57120,AT1G48570,AT5G63960,AT5G64420,AT1G22270,AT2G45730,AT3G22425,AT1G31010,AT4G28310,AT1G09830,AT1G80080,AT3G11964,AT5G47455,AT4G28450,AT4G23540,AT2G32590,AT1G78180,AT3G26744,AT2G43360,AT1G30960,AT5G11450,AT3G55605,AT5G16620,AT1G07070,AT3G21540,AT5G10910,AT5G25500,AT5G40270,AT2G15690,AT3G48500,AT3G57940,AT5G17800,AT5G05990,AT5G61370,AT2G37510,AT3G28600,AT5G61030,AT1G76120,AT2G29570,AT5G27560,AT1G67660,AT2G28600,AT2G46110,AT5G38890,AT1G18850,AT5G57590,AT5G62440,AT2G32280,AT5G49160,AT1G74560,AT3G48425,AT1G28395,AT5G23910,AT4G18370,AT5G08610,AT1G69770,AT5G13290,AT1G03530,AT5G11510,AT1G15480,AT2G25355,AT3G52180,AT1G80720,AT4G02060,AT1G20300,AT1G13730,AT4G34980,AT5G46280,AT5G66960,AT1G10522,AT1G80270,AT1G04520,AT1G10330,AT3G30350,AT2G20515,AT1G27880,AT2G18330,AT5G60730,AT1G73620,AT1G77550,AT5G36950,AT3G12770,AT4G11190,AT4G36180,AT3G15000,AT2G27840,AT2G28950,AT5G45700,AT1G61990,AT1G18040,AT1G10270,AT5G67630,AT2G28000,AT3G49240,AT1G26760,AT2G22840,AT5G13960,AT5G38720,AT5G14660,AT3G54090,AT2G29660,AT1G21880,AT2G04030,AT2G41950,AT1G20230,AT3G44750,AT2G04530,AT2G38060,AT3G14900,AT4G20320,AT5G23300,AT3G59670,AT5G02050,AT1G07370,AT5G48650,AT4G26780,AT3G09700,AT2G01630,AT1G53070,AT1G51380,AT5G09420,AT2G20490,AT1G52530,AT1G09340,AT4G02460,AT5G55920,AT4G02750,AT5G08400,AT4G27010,AT5G42480,AT1G66250,AT4G37540,AT5G14580,AT3G15357,AT3G10950,AT4G26660,AT1G69200,AT5G47990,AT5G54910,AT2G38810,AT1G08580,AT2G07170,AT3G56330,AT3G51320,AT4G29170,AT4G04940,AT4G21820,AT5G39940,AT1G79490,AT2G39880,AT5G14450,AT5G57980,AT1G73590,AT3G53190,AT5G60150,AT4G05520,AT3G06840,AT3G04260,AT5G67100,AT2G35605,AT5G25580,AT5G50740,AT4G25150,AT1G16330,AT3G12860,AT1G03310,AT2G39140,AT5G12970,AT5G27330,AT5G46580,AT5G09840,AT1G34110,AT1G56110,AT2G37380,AT3G19440,AT5G09240,AT3G06030,AT5G41880,AT4G33400,AT3G62060,AT1G26530,AT3G54890,AT4G36620,AT2G31840,AT1G72670,AT5G52630,AT4G30700,AT4G32890,AT4G13690,AT1G21560,AT2G26330,AT2G19670,AT4G37170,AT5G66540,AT1G15290,AT4G38100,AT3G18610,AT3G14890,AT4G37740,AT3G60900,AT4G37630,AT3G19590,AT1G50000,AT4G02390,AT2G18900,AT2G18520,AT1G69440,AT1G56050,AT2G22260,AT1G79220,AT4G14850,AT2G36730,AT1G67830,AT2G23050,AT2G39795,AT5G48360,AT1G02060,AT1G65900,AT5G55730,AT5G27110,AT1G79150,AT3G59550,AT5G15950,AT5G61000,AT2G16580,AT5G57530,AT4G14695,AT5G48480,AT4G11080,AT5G55220,AT5G10390,AT4G34220,AT3G49710,AT2G15630,AT2G25160,AT5G63530,AT4G25240,AT3G51290,AT1G31760,AT2G25270,AT2G46830,AT2G24540,AT1G64970,AT2G44190,AT5G50890,AT3G45780,AT4G38150,AT1G03270,AT4G35620,AT1G71850,AT3G03630,AT3G03680,AT5G39840,AT1G04020,AT4G38660,AT1G72250,AT3G20240,AT5G43990,AT1G79470,AT5G63660,AT1G19900,AT3G48970,AT5G62550,AT5G07030,AT5G46740,AT4G31360,AT3G06950,AT3G04340,AT4G14200,AT2G42290,AT3G17680,AT3G58100,AT3G14190,AT5G13840,AT5G43020,AT3G12870,AT1G47670,AT4G18570,AT5G63630,AT5G66750,AT4G27660,AT2G16230,AT5G27200,AT4G36580,AT5G37010,AT3G51280,AT1G50110,AT5G16250,AT5G08020,AT1G48460,AT3G46940,AT1G77630,AT1G26330,AT5G52950,AT4G39630,AT4G37550,AT2G33680,AT4G38050,AT3G25980,AT5G57170,AT1G10780,AT4G26600,AT2G20710,AT2G37400,AT5G51600,AT3G03450,AT3G23670,AT1G23000,AT2G37560,AT4G34760,AT1G09450,AT5G48460,AT3G03130,AT1G50490,AT3G02640,AT1G18250,AT1G62980,AT2G26760,AT2G37390,AT2G17620,AT1G02690,AT3G61610,AT3G23890,AT1G20930,AT3G62680,AT5G04960,AT2G37300,AT3G27330,AT5G59750,AT1G08560,AT1G59540,AT4G14150,AT3G10310,AT3G56100,AT5G15725,AT2G37420,AT4G23800,AT1G62500,AT4G02270,AT5G55520,AT3G02120,AT3G29280,AT4G37110,AT2G26180,AT1G34355,AT3G44050,AT1G63100,AT1G76540,AT2G04480,AT1G53140,AT5G24330,AT1G03780,AT2G28620,AT3G18524,AT3G24320,AT5G06940,AT4G28950,AT2G22610,AT5G51810,AT4G10640,AT1G02730,AT4G05190,AT4G32830,AT3G52110,AT2G03090,AT1G05440,AT4G02070,AT3G51720,AT1G76310,AT5G48310,AT4G15830,AT5G17160,AT1G16070,AT2G25880,AT4G02800,AT5G40320,AT1G17460,AT1G44110,AT4G31840,AT4G03100,AT2G25060,AT3G55660,AT5G15510,AT3G15720,AT5G60930,AT5G62960,AT2G34190,AT3G51740,AT1G18370,AT3G62760,AT5G25090,AT4G01730,AT2G42110,AT1G68640,AT3G11520,AT4G37490 SOZZANI_CHIP-CHIP_SHR-TIME-COURSE_DIFF List of of genes found by ChIP-chip and differentially expressed in SHR time course (Table S8 PubmedID:20596025) AT1G01360,AT1G01840,AT1G02360,AT1G02370,AT1G03840,AT1G08930,AT1G09070,AT1G14730,AT1G15670,AT1G23710,AT1G28130,AT1G28380,AT1G28480,AT1G30370,AT1G50420,AT1G55920,AT1G59590,AT1G70300,AT1G70410,AT1G78110,AT2G03730,AT2G17710,AT2G18700,AT2G24550,AT2G31110,AT2G32140,AT2G32150,AT2G33310,AT2G35930,AT3G01470,AT3G02140,AT3G03770,AT3G13310,AT3G13800,AT3G19580,AT3G19590,AT3G25610,AT3G43430,AT3G49810,AT3G49840,AT3G51920,AT3G54220,AT4G01330,AT4G02940,AT4G03270,AT4G16370,AT4G25560,AT4G30350,AT5G04840,AT5G05140,AT5G05440,AT5G10510,AT5G11540,AT5G14700,AT5G22570,AT5G24270,AT5G24600,AT5G25810,AT5G37740,AT5G44160,AT5G45110,AT5G47230,AT5G49720,AT5G53550,AT5G59220 SOZZANI_10MMDEX-TREATMENT_UP Genes induced by 10 ?M Dex treatment (Table S12 PubmedID:20596025) AT3G54580,AT5G23020,AT5G23010,AT2G39310,AT3G60280,AT3G19710,AT5G37990,AT5G03545,AT4G13770,AT5G04950,AT1G21310,AT4G12480,AT2G02990,AT5G56080,AT2G16005,AT2G18370 MHAMDI_8H_GR1-DYE-SWAPPED/COL-0-RNA_UP Induced 8h days-The list is restricted to genes that showed significantly consistent responses in two biological repeats of gr1 extracts dye-swapped with Col-0 RNA (Table S2 PubmedID:20488891) AT1G51090,AT1G59870,AT2G06845,AT2G29420,AT2G34930,AT3G01345,AT3G09440,AT3G14990,AT3G50970,AT3G55920,AT4G13180,AT4G15760,AT4G23600,AT4G35630,AT5G03210,AT5G05730,AT5G08530,AT5G52310,AT5G56760 MHAMDI_8H_GR1-DYE-SWAPPED/COL-0-RNA_DN Repressed 8h days-The list is restricted to genes that showed significantly consistent responses in two biological repeats of gr1 extracts dye-swapped with Col-0 RNA (Table S2 PubmedID:20488891) AT1G07135,AT1G07510,AT1G34680,AT1G73260,AT1G74670,AT2G07600,AT2G20670,AT2G40610,AT3G10040,AT3G16340,AT3G46620,AT4G26530,AT5G02760,AT5G06310,AT5G06320,AT5G54490,AT5G60680,AT5G61590,AT5G61600,mirspot995 MHAMDI_16H_GR1-DYE-SWAPPED/COL-0-RNA_UP Induced 16h days-The list is restricted to genes that showed significantly consistent responses in two biological repeats of gr1 extracts dye-swapped with Col-0 RNA (Table S2 PubmedID:20488891) AT2G05380,AT2G46970,AT3G14990,AT3G55920,AT3G62550,AT4G13180,AT5G48850 MHAMDI_16H_GR1-DYE-SWAPPED/COL-0-RNA_DN Repressed 16h days-The list is restricted to genes that showed significantly consistent responses in two biological repeats of gr1 extracts dye-swapped with Col-0 RNA (Table S2 PubmedID:20488891) AT1G07510,AT1G17420,AT1G52720,AT1G74430,AT2G24850,AT2G29440,AT2G34600,AT2G38240,AT2G43530,AT2G44230,AT3G16340,AT3G25180,AT4G10990,AT4G15440,AT5G13220,AT5G19110,AT5G24420,AT5G54170 MHAMDI_GR1_CAT2_CAT2-GR1/COL0_DIFF Differential expression in gr1, cat2, and cat2 gr1 relative to Col0. (Table S3 PubmedID:20488891) AT1G01120,AT1G01470,AT1G02400,AT1G02850,AT1G03850,AT1G03870,AT1G04690,AT1G05300,AT1G05670,AT1G06080,AT1G06570,AT1G06620,AT1G07135,AT1G07260,AT1G07400,AT1G07510,AT1G07890,AT1G08200,AT1G08830,AT1G09070,AT1G09750,AT1G09950,AT1G09970,AT1G11545,AT1G11670,AT1G11850,AT1G11910,AT1G12520,AT1G13650,AT1G13990,AT1G15125,AT1G15380,AT1G16030,AT1G16370,AT1G16850,AT1G17420,AT1G17620,AT1G17745,AT1G17860,AT1G18020,AT1G18210,AT1G18450,AT1G18710,AT1G18730,AT1G19180,AT1G19300,AT1G19380,AT1G19610,AT1G19640,AT1G19670,AT1G20070,AT1G20440,AT1G20510,AT1G20693,AT1G21270,AT1G21520,AT1G21570,AT1G21680,AT1G22880,AT1G23440,AT1G26210,AT1G26770,AT1G26800,AT1G26810,AT1G27080,AT1G28050,AT1G28480,AT1G28580,AT1G29330,AT1G30280,AT1G30320,AT1G30360,AT1G31600,AT1G32160,AT1G32340,AT1G32460,AT1G32900,AT1G33110,AT1G34680,AT1G43160,AT1G44780,AT1G48100,AT1G49500,AT1G51090,AT1G51780,AT1G51805,AT1G52030,AT1G52400,AT1G52410,AT1G52720,AT1G52890,AT1G54100,AT1G55450,AT1G55960,AT1G56220,AT1G56280,AT1G56300,AT1G56660,AT1G57590,AT1G58200,AT1G59860,AT1G59870,AT1G60950,AT1G61630,AT1G61740,AT1G61890,AT1G62305,AT1G62320,AT1G62570,AT1G62980,AT1G63840,AT1G64355,AT1G64370,AT1G64385,AT1G64450,AT1G64780,AT1G64900,AT1G64980,AT1G65280,AT1G65390,AT1G65490,AT1G66080,AT1G66100,AT1G66350,AT1G66580,AT1G66760,AT1G67360,AT1G67500,AT1G68500,AT1G69500,AT1G69526,AT1G70370,AT1G70530,AT1G70700,AT1G71030,AT1G71100,AT1G71960,AT1G72180,AT1G72260,AT1G72416,AT1G72450,AT1G72520,AT1G72680,AT1G73120,AT1G73260,AT1G73325,AT1G73480,AT1G73600,AT1G74100,AT1G74430,AT1G74450,AT1G74670,AT1G74950,AT1G75040,AT1G75270,AT1G75280,AT1G75690,AT1G75830,AT1G76070,AT1G76130,AT1G76160,AT1G76180,AT1G76360,AT1G76520,AT1G76530,AT1G76580,AT1G76600,AT1G76790,AT1G76960,AT1G77210,AT1G77760,AT1G77920,AT1G78070,AT1G78080,AT1G78380,AT1G78600,AT1G79160,AT1G79245,AT1G79410,AT1G80120,AT1G80440,AT1G80840,AT1G80910,AT2G02800,AT2G02990,AT2G03310,AT2G03340,AT2G03760,AT2G04160,AT2G05380,AT2G05520,AT2G05540,AT2G05645,AT2G05935,AT2G06050,AT2G06845,AT2G06850,AT2G07600,AT2G13790,AT2G13800,AT2G15050,AT2G15490,AT2G16500,AT2G17500,AT2G17840,AT2G18700,AT2G19310,AT2G19780,AT2G20340,AT2G20670,AT2G21185,AT2G21640,AT2G22200,AT2G22500,AT2G22870,AT2G23120,AT2G23150,AT2G23420,AT2G24500,AT2G24600,AT2G24850,AT2G25000,AT2G25490,AT2G26150,AT2G26560,AT2G27420,AT2G27500,AT2G27690,AT2G28080,AT2G28190,AT2G29090,AT2G29350,AT2G29420,AT2G29440,AT2G29450,AT2G29500,AT2G29980,AT2G30140,AT2G30360,AT2G31400,AT2G31460,AT2G32150,AT2G32240,AT2G32510,AT2G33380,AT2G34070,AT2G34600,AT2G34660,AT2G34810,AT2G34930,AT2G35290,AT2G36120,AT2G36380,AT2G37130,AT2G37180,AT2G37710,AT2G37760,AT2G37770,AT2G37970,AT2G38170,AT2G38180,AT2G38240,AT2G38400,AT2G39030,AT2G39250,AT2G39310,AT2G39330,AT2G39420,AT2G40080,AT2G40230,AT2G40340,AT2G40610,AT2G41110,AT2G41180,AT2G41240,AT2G41380,AT2G41705,AT2G42530,AT2G42760,AT2G43510,AT2G43520,AT2G43530,AT2G43570,AT2G43590,AT2G43620,AT2G43820,AT2G44230,AT2G44500,AT2G44840,AT2G45180,AT2G45820,AT2G46370,AT2G46510,AT2G46520,AT2G46600,AT2G46810,AT2G46820,AT2G46970,AT2G47180,AT2G47730,AT2G47880,AT3E22410,AT3G01345,AT3G01970,AT3G02480,AT3G02550,AT3G02570,AT3G02875,AT3G03990,AT3G04010,AT3G04210,AT3G04720,AT3G05500,AT3G06550,AT3G06770,AT3G07010,AT3G07720,AT3G08690,AT3G09250,AT3G09270,AT3G09350,AT3G09390,AT3G09440,AT3G10020,AT3G10040,AT3G10190,AT3G10300,AT3G10400,AT3G10520,AT3G10660,AT3G10720,AT3G11340,AT3G11480,AT3G11820,AT3G12145,AT3G12580,AT3G12610,AT3G12880,AT3G12890,AT3G13520,AT3G13610,AT3G14990,AT3G15356,AT3G15450,AT3G15720,AT3G16340,AT3G16400,AT3G16450,AT3G16460,AT3G16470,AT3G17611,AT3G17860,AT3G18000,AT3G18080,AT3G18290,AT3G19030,AT3G22060,AT3G22290,AT3G22370,AT3G23250,AT3G23550,AT3G23560,AT3G23820,AT3G24170,AT3G24500,AT3G24520,AT3G25180,AT3G25690,AT3G27170,AT3G28210,AT3G28270,AT3G28300,AT3G28730,AT3G28930,AT3G29575,AT3G30775,AT3G32990,AT3G33000,AT3G33002,AT3G44190,AT3G44300,AT3G45140,AT3G46220,AT3G46620,AT3G46670,AT3G47160,AT3G47640,AT3G47950,AT3G48460,AT3G48520,AT3G48690,AT3G50740,AT3G50950,AT3G50970,AT3G51600,AT3G51660,AT3G52360,AT3G52470,AT3G52500,AT3G52800,AT3G55920,AT3G55970,AT3G56200,AT3G56260,AT3G57450,AT3G57520,AT3G59050,AT3G59140,AT3G59220,AT3G59350,AT3G59900,AT3G62550,AT3G62860,AT4E11720,AT4G00300,AT4G01080,AT4G01610,AT4G01870,AT4G02360,AT4G02380,AT4G02520,AT4G04610,AT4G04830,AT4G05400,AT4G08300,AT4G10160,AT4G10990,AT4G11600,AT4G12000,AT4G12400,AT4G12720,AT4G12730,AT4G12790,AT4G13180,AT4G13510,AT4G14365,AT4G15210,AT4G15420,AT4G15440,AT4G15610,AT4G15760,AT4G15765,AT4G16190,AT4G16260,AT4G16500,AT4G16590,AT4G16760,AT4G16980,AT4G17230,AT4G17470,AT4G18280,AT4G18440,AT4G19410,AT4G21570,AT4G21580,AT4G21870,AT4G21910,AT4G22240,AT4G22470,AT4G22530,AT4G22570,AT4G23600,AT4G23670,AT4G24350,AT4G24380,AT4G24510,AT4G24780,AT4G24960,AT4G25100,AT4G25200,AT4G25780,AT4G26530,AT4G26670,AT4G27070,AT4G27410,AT4G27500,AT4G27560,AT4G27640,AT4G27790,AT4G28290,AT4G29700,AT4G29740,AT4G30110,AT4G30450,AT4G30530,AT4G31780,AT4G31800,AT4G31860,AT4G32480,AT4G32800,AT4G32930,AT4G33540,AT4G33666,AT4G34110,AT4G34630,AT4G34710,AT4G35080,AT4G35090,AT4G35630,AT4G36010,AT4G36040,AT4G36950,AT4G37260,AT4G37410,AT4G38810,AT4G38840,AT4G38860,AT4G39080,AT4G39640,AT4G39800,AT4G39840,AT5G01720,AT5G02500,AT5G02760,AT5G03210,AT5G03240,AT5G03350,AT5G03380,AT5G03545,AT5G03630,AT5G05360,AT5G05600,AT5G05730,AT5G06310,AT5G06530,AT5G06860,AT5G06870,AT5G07440,AT5G08530,AT5G09440,AT5G10300,AT5G10410,AT5G10760,AT5G11090,AT5G11670,AT5G12030,AT5G13220,AT5G13550,AT5G13740,AT5G13750,AT5G14180,AT5G14780,AT5G15650,AT5G15850,AT5G16010,AT5G17380,AT5G17860,AT5G18290,AT5G18600,AT5G19110,AT5G19440,AT5G19990,AT5G20000,AT5G20190,AT5G20230,AT5G20630,AT5G20700,AT5G23540,AT5G23660,AT5G24030,AT5G24160,AT5G24380,AT5G24420,AT5G24655,AT5G24660,AT5G25450,AT5G26220,AT5G26340,AT5G26770,AT5G27520,AT5G27600,AT5G27760,AT5G28237,AT5G35320,AT5G35630,AT5G36910,AT5G37600,AT5G37670,AT5G38895,AT5G39050,AT5G39090,AT5G39250,AT5G40390,AT5G40580,AT5G41310,AT5G41600,AT5G42020,AT5G42110,AT5G42650,AT5G43450,AT5G43580,AT5G43850,AT5G43860,AT5G44020,AT5G44100,AT5G44580,AT5G45750,AT5G47120,AT5G47220,AT5G47240,AT5G48020,AT5G48180,AT5G48540,AT5G48850,AT5G49360,AT5G49480,AT5G49520,AT5G49730,AT5G51070,AT5G51440,AT5G51830,AT5G52070,AT5G52310,AT5G52640,AT5G53050,AT5G53420,AT5G53450,AT5G53750,AT5G53760,AT5G54170,AT5G54206,AT5G54300,AT5G54490,AT5G55620,AT5G55650,AT5G55930,AT5G56760,AT5G56870,AT5G57785,AT5G58070,AT5G58300,AT5G59540,AT5G60680,AT5G60890,AT5G61520,AT5G61590,AT5G61600,AT5G61820,AT5G62280,AT5G62740,AT5G63180,AT5G63780,AT5G64480,AT5G66540,AT5G67210,AT5G67300,AT5G67480,mirspot127,mirspot182,mirspot193,mirspot340,mirspot479,mirspot571,mirspot937,mirspot940,mirspot943,mirspot955,mirspot959,mirspot995 MHAMDI_JA-ASSOCIATED_CAT2_CAT2-GR1_DIFF Diff-Expression of JA-associated genes in cat2 and cat2 gr1. (Table S4 PubmedID:20488891) AT2G38240,AT1G52890,AT1G43160,AT2G29440,AT5G13220,AT2G33380,AT5G42650,AT3G11480,AT1G66760,AT2G24850,AT2G43530,AT5G06870,AT2G39330,AT3G16470,AT4G16760,AT4G23600,AT4G24350,AT4G24370,AT5G10300,AT2G39030,AT1G18020,AT1G18710,AT1G19180,AT1G20510,AT1G17420,AT1G70700,AT1G72450,AT1G72520,AT2G06050,AT2G34600,AT4G15440,AT5G47240,AT1G74430,AT1G74440,AT1G74950,AT2G20340,AT2G46370,AT3G23250,AT5G53750,AT5G54170,AT2G46510,AT4G36010,AT2G22500,AT3G45140,AT1G19640,AT3G17860,AT1G19670,AT1G28480,AT2G32150 LONG_FE_UP Up-Genes affected in wild-type plants by -Fe.--Microarry analysis of wild-type and pye-1 mutants after 24 hours of exposure to +Fe or -Fe media. (Table S3 PubmedID:20675571) AT2G23170,AT2G41540,AT2G41660,AT2G45400,AT4G14880,AT4G16370,AT4G17215,AT4G15920,AT4G15500,AT4G14580,AT5G22060,AT5G04150,AT5G04170,AT5G04220,AT1G44110,AT1G58080,AT5G09480,AT5G20830,AT5G19970,AT5G19980,AT4G36890,AT1G51850,AT1G31770,AT1G31730,AT5G04820,AT5G67370,AT5G67330,AT5G67210,AT5G66120,AT5G63850,AT5G64030,AT5G63590,AT5G63410,AT5G62530,AT5G62630,AT5G62130,AT5G62390,AT5G62420,AT5G60280,AT5G59480,AT5G59300,AT5G58510,AT5G58300,AT5G57070,AT5G55970,AT5G55070,AT5G55180,AT5G55200,AT5G55310,AT5G54800,AT5G54510,AT5G53850,AT5G53340,AT5G53450,AT5G51410,AT5G51590,AT5G51630,AT5G50210,AT5G49350,AT5G47910,AT5G45390,AT5G45070,AT5G44730,AT5G44550,AT5G43100,AT5G42740,AT5G40390,AT5G38820,AT5G38830,AT5G38030,AT5G37690,AT5G36890,AT5G35730,AT5G24660,AT5G24290,AT5G23830,AT5G23010,AT5G23020,AT5G22740,AT5G18500,AT5G14040,AT5G13740,AT5G12970,AT5G12040,AT5G11700,AT5G09870,AT5G08260,AT5G07390,AT5G07030,AT5G05820,AT5G05960,AT5G05160,AT5G05250,AT5G04950,AT5G03840,AT5G03760,AT5G03380,AT5G03570,AT5G02780,AT5G02380,AT5G02580,AT5G01460,AT5G01700,AT3G61930,AT3G61410,AT3G59710,AT3G59760,AT3G58990,AT3G58810,AT3G58060,AT3G57330,AT3G56980,AT3G56360,AT3G55360,AT3G54990,AT3G54260,AT3G53480,AT3G53230,AT3G53260,AT3G52880,AT3G52900,AT3G51670,AT3G51330,AT3G51540,AT3G50740,AT3G50660,AT3G48450,AT3G47640,AT3G46900,AT3G45980,AT3G44990,AT3G44320,AT4G39820,AT4G39350,AT4G38630,AT4G38830,AT4G38510,AT4G37450,AT4G36360,AT4G34160,AT4G33410,AT4G31940,AT4G30996,AT4G30810,AT4G30530,AT4G30490,AT4G30120,AT4G29740,AT4G29220,AT4G29230,AT4G29330,AT4G28440,AT4G28250,AT4G25320,AT4G25640,AT4G25240,AT4G24380,AT4G23885,AT4G24140,AT4G23740,AT4G23470,AT4G20390,AT4G19680,AT4G19690,AT4G19370,AT4G18610,AT4G13770,AT4G12880,AT4G11820,AT4G12030,AT4G02940,AT4G02600,AT4G02075,AT4G02330,AT4G00900,AT4G00440,AT1G19850,AT1G19270,AT1G07140,AT1G18250,AT1G51680,AT1G56320,AT3G02360,AT3G22850,AT3G21070,AT3G19710,AT3G18290,AT3G20130,AT3G12900,AT3G27300,AT3G27200,AT3G15000,AT3G24180,AT3G26590,AT3G20370,AT3G12820,AT3G18400,AT3G15950,AT3G27060,AT3G25290,AT3G25250,AT3G17770,AT3G16910,AT3G25540,AT3G19400,AT3G21190,AT3G21240,AT3G25900,AT3G14310,AT3G02640,AT3G02630,AT3G06890,AT3G02910,AT3G05890,AT3G07100,AT3G01860,AT3G07320,AT3G04910,AT3G10340,AT3G10380,AT3G01680,AT3G03610,AT3G07720,AT3G01260,AT3G11430,AT3G11490,AT3G16450,AT1G01610,AT1G18910,AT1G12360,AT1G56430,AT1G77690,AT1G64390,AT1G64400,AT1G49820,AT1G72180,AT1G72300,AT1G72700,AT1G71400,AT1G76550,AT1G68810,AT1G78120,AT1G78090,AT1G36370,AT1G80280,AT1G80340,AT1G80360,AT2G47200,AT1G53310,AT1G55940,AT2G43670,AT1G78320,AT1G43650,AT1G21440,AT1G02500,AT1G45160,AT1G07370,AT1G63000,AT1G04770,AT1G12850,AT1G28400,AT1G47400,AT1G76090,AT1G16060,AT1G50560,AT1G80690,AT1G22550,AT1G35580,AT1G80190,AT1G80240,AT1G56160,AT1G02730,AT1G74790,AT1G73080,AT1G73120,AT1G34670,AT1G34760,AT1G11310,AT1G21750,AT1G62800,AT1G28680,AT1G11790,AT1G64980,AT1G79440,AT1G65840,AT1G75500,AT1G75730,AT1G23330,AT2G17500,AT1G54115,AT1G05520,AT2G14100,AT2G24762,AT2G42580,AT2G21600,AT2G01880,AT1G26850,AT1G31130,AT2G21540,AT2G46370,AT2G24570,AT2G40370,AT2G36880,AT2G36910,AT2G42750,AT2G42790,AT2G21050,AT2G22330,AT2G27920,AT1G78950,AT1G04220,AT1G11840,AT2G25180,AT1G10290,AT1G43130,AT1G67110,AT1G77280,AT1G09560,AT1G08990,AT1G09790,AT1G23020,AT1G03470,AT1G76950,AT1G27000,AT1G24430,AT1G61580,AT1G51980,AT1G62640,AT2G28410,AT2G13820,AT2G18090,AT2G37280,AT2G05830,AT2G18730,AT2G02130,AT2G27550,AT2G29440,AT2G27000,AT2G46710,AT2G43100,AT2G06925,AT2G03200,AT2G46740,AT2G03090,AT2G38110,AT2G30990,AT2G30070,AT2G34710,AT2G19340,AT2G19410,AT2G40070,AT2G26230,AT2G32720,AT2G45590,AT2G39700,AT2G32990,AT2G26690,AT2G26760,AT2G26730 LONG_FE_DN Down-Genes affected in wild-type plants by -Fe.--Microarry analysis of wild-type and pye-1 mutants after 24 hours of exposure to +Fe or -Fe media. (Table S3 PubmedID:20675571) AT4G16860,AT4G14780,AT1G45545,AT5G19800,AT5G13140,AT4G37220,AT5G16920,AT5G36270,AT5G25910,AT5G04880,AT5G24880,AT5G67400,AT5G67020,AT5G67080,AT5G65160,AT5G61920,AT5G61650,AT5G59400,AT5G58360,AT5G57530,AT5G57540,AT5G54620,AT5G49620,AT5G46450,AT5G44580,AT5G38700,AT5G22410,AT5G18470,AT5G13630,AT5G10040,AT5G09970,AT5G07190,AT5G07330,AT5G06760,AT5G03670,AT5G01600,AT3G59900,AT3G54870,AT3G53200,AT3G51590,AT3G51750,AT3G49960,AT3G49160,AT3G47430,AT3G47340,AT3G45730,AT3G43670,AT4G40090,AT4G30320,AT4G28850,AT4G25790,AT4G25820,AT4G25220,AT4G13390,AT4G12920,AT4G10460,AT4G08620,AT4G08820,AT4G07960,AT4G07540,AT4G04770,AT4G04900,AT4G04280,AT4G02910,AT4G01430,AT1G58290,AT1G06990,AT1G18100,AT1G30135,AT3G12540,AT1G69490,AT1G54970,AT3G26390,AT3G30720,AT3G21520,AT3G11000,AT3G13370,AT3G23170,AT3G14580,AT3G15670,AT3G14370,AT3G15440,AT3G04000,AT3G09930,AT3G07490,AT3G01730,AT1G55290,AT1G60985,AT1G71030,AT1G79860,AT1G71890,AT1G74490,AT1G69240,AT1G70460,AT1G53340,AT1G49210,AT1G53490,AT1G34510,AT1G63600,AT1G15960,AT1G52640,AT1G68650,AT1G34330,AT1G15330,AT1G43590,AT1G23910,AT1G03010,AT2G38830,AT2G47160,AT2G20520,AT2G04038,AT2G25240,AT2G04870,AT2G04790,AT2G40300,AT2G36885,AT2G04380,AT2G36210,AT2G03720,AT1G79320,AT1G62070,AT1G61490,AT2G17890,AT1G23650,AT2G35730,AT2G18550,AT2G29180,AT2G46860,AT2G28980,AT2G39980 LONG_PYE-1_FE_UP Up-Genes affected in pye-1 mutants by -Fe..--Microarry analysis of wild-type and pye-1 mutants after 24 hours of exposure to +Fe or -Fe media. (Table S3 PubmedID:20675571) AT2G45400,AT4G16370,AT5G04150,AT5G20830,AT5G25840,AT5G04820,AT5G67370,AT5G67330,AT5G62420,AT5G60280,AT5G58650,AT5G53450,AT5G52640,AT5G51010,AT5G47910,AT5G45340,AT5G45070,AT5G44730,AT5G38820,AT5G36890,AT5G15120,AT5G15190,AT5G13910,AT5G13740,AT5G07390,AT5G05250,AT5G04950,AT5G02780,AT5G02580,AT5G01060,AT3G61930,AT3G61410,AT3G58810,AT3G58060,AT3G56980,AT3G56360,AT3G53230,AT3G53260,AT3G51540,AT3G50930,AT3G48450,AT3G46900,AT3G43190,AT4G33070,AT4G31940,AT4G29780,AT4G30120,AT4G29220,AT4G26890,AT4G25700,AT4G25030,AT4G24110,AT4G22890,AT4G19680,AT4G19690,AT4G19370,AT4G13090,AT4G09110,AT4G02330,AT1G19850,AT1G51680,AT3G28210,AT3G19580,AT3G18290,AT3G12900,AT3G27220,AT3G28050,AT1G16150,AT3G12820,AT3G25250,AT3G17770,AT3G21270,AT3G21240,AT3G02550,AT3G06890,AT3G08040,AT3G10040,AT3G01350,AT3G01490,AT3G07720,AT3G05120,AT1G69050,AT1G18910,AT1G56430,AT1G76800,AT1G76650,AT1G74450,AT1G80360,AT1G02500,AT1G07500,AT1G32870,AT1G47400,AT1G56160,AT1G73120,AT1G34760,AT1G64980,AT1G05530,AT2G21640,AT2G01880,AT2G21540,AT2G42750,AT1G60190,AT1G77280,AT1G09790,AT1G23020,AT1G03470,AT1G77120,AT2G05830,AT2G41480,AT2G45590 LONG_PYE-1_FE_DN Down-Genes affected in pye-1 mutants by -Fe.--Microarry analysis of wild-type and pye-1 mutants after 24 hours of exposure to +Fe or -Fe media. (Table S3 PubmedID:20675571) AT5G20150,AT5G54040,AT5G23010,AT5G23020,AT5G13630,AT3G49960,AT3G44990,AT4G30320,AT4G26010,AT4G25820,AT4G01680,AT1G54970,AT1G21440,AT1G08380,AT1G68590,AT2G40300,AT2G03720,AT1G67110 LONG_WT/PYE-1-MUTANT-UNDER(-FE)_DIFF Diff-PYE response genes: genes that are upregulated or down-regulated between wild-type and pye-1 mutants under -Fe..--Microarry analysis of wild-type and pye-1 mutants after 24 hours of exposure to +Fe or -Fe media. (Table S3 PubmedID:20675571) AT1G02640,AT1G06040,AT1G11840,AT1G14120,AT1G21140,AT1G21440,AT1G22770,AT1G33055,AT1G44800,AT1G47400,AT1G69050,AT1G69830,AT1G70890,AT1G76650,AT1G76800,AT1G77120,AT1G78000,AT1G78120,AT1G78370,AT1G79470,AT2G01140,AT2G01890,AT2G01970,AT2G02120,AT2G03090,AT2G05540,AT2G15970,AT2G21640,AT2G22330,AT2G29440,AT2G29630,AT2G31790,AT2G43100,AT2G43535,AT3G01490,AT3G02550,AT3G08040,AT3G10040,AT3G16450,AT3G16800,AT3G19710,AT3G20100,AT3G20370,AT3G22840,AT3G25190,AT3G28050,AT3G28210,AT3G43190,AT3G44990,AT3G47470,AT3G47640,AT3G47650,AT3G49580,AT3G53230,AT3G56980,AT3G58990,AT4G13770,AT4G16370,AT4G20460,AT4G24110,AT4G25100,AT4G25640,AT4G26890,AT4G27450,AT4G29690,AT4G29700,AT4G30530,AT4G30660,AT4G31330,AT4G33070,AT5G01600,AT5G04150,AT5G05960,AT5G07010,AT5G13740,AT5G15120,AT5G17170,AT5G17230,AT5G20150,AT5G23010,AT5G23020,AT5G24660,AT5G25840,AT5G38030,AT5G40390,AT5G51010,AT5G51440,AT5G52640,AT5G53450,AT5G63450,AT5G63850,AT5G67330,AT5G67370 LONG_WT/PYE-1-MUTANT-UNDER(+FE&-FE)_DIFF Diff-Expression profiles of all genes affected by -Fe in wild-type and pye-1 plants, and genes differentially expressed between wild-type and pye-1 mutants under both +Fe and -Fe conditions.--Microarry analysis of wild-type and pye-1 mutants after 24 hours of exposure to +Fe or -Fe media. (Table S3 PubmedID:20675571) AT4G16860,AT5G13140,AT5G16920,AT5G25910,AT5G67080,AT5G61920,AT5G59400,AT5G54620,AT5G49620,AT5G46450,AT5G44580,AT5G18470,AT5G10040,AT5G07330,AT5G06760,AT3G53200,AT3G51590,AT3G51750,AT3G47430,AT3G45730,AT4G12920,AT4G10460,AT4G08820,AT4G07540,AT4G04280,AT1G06990,AT1G30135,AT3G26390,AT3G21520,AT3G11000,AT3G13370,AT3G15670,AT3G15440,AT3G09930,AT3G07490,AT1G60985,AT1G71890,AT1G15960,AT1G52640,AT1G23910,AT1G03010,AT2G38830,AT2G04038,AT2G04870,AT2G04790,AT2G04380,AT1G62070,AT1G23650,AT2G18550,AT5G11080,AT1G58150,AT5G27440,AT5G57560,AT5G48570,AT5G39890,AT5G18240,AT5G01380,AT3G50440,AT4G13250,AT4G00180,AT3G30250,AT1G78840,AT3G18710,AT1G47890,AT1G19540,AT1G48980,AT1G02700,AT2G03830,AT4G14780,AT1G45545,AT4G37220,AT5G04880,AT5G24880,AT5G67020,AT5G38700,AT5G09970,AT5G07190,AT5G01600,AT3G59900,AT3G43670,AT4G28850,AT4G25220,AT4G08620,AT4G04770,AT4G04900,AT4G02910,AT4G01430,AT1G58290,AT1G69490,AT3G30720,AT3G23170,AT3G04000,AT3G01730,AT1G79860,AT1G74490,AT1G53340,AT1G63600,AT1G68650,AT1G34330,AT1G15330,AT1G43590,AT2G40300,AT2G36210,AT1G61490,AT2G17890,AT2G35730,AT2G46860,AT2G28980,AT2G39980,AT4G25100,AT3G25190,AT1G21140,AT2G05540,AT5G40510,AT2G46450,AT5G19800,AT5G36270,AT5G67400,AT5G65160,AT5G61650,AT5G58360,AT5G57530,AT5G57540,AT5G22410,AT5G13630,AT5G03670,AT3G54870,AT3G49960,AT3G49160,AT3G47340,AT4G40090,AT4G30320,AT4G25790,AT4G25820,AT4G13390,AT4G07960,AT3G12540,AT1G54970,AT3G14370,AT1G55290,AT1G69240,AT1G70460,AT1G49210,AT1G34510,AT2G47160,AT2G20520,AT2G25240,AT2G36885,AT2G03720,AT1G79320,AT2G29180,AT1G78120,AT3G44140,AT1G02640,AT5G54040,AT4G26010,AT4G01680,AT1G68590,AT1G18100,AT1G71030,AT4G14880,AT4G15500,AT4G14580,AT1G44110,AT5G19980,AT4G36890,AT1G31770,AT5G63590,AT5G63410,AT5G62530,AT5G59300,AT5G58300,AT5G57070,AT5G55070,AT5G54510,AT5G53340,AT5G51590,AT5G50210,AT5G45390,AT5G43100,AT5G40390,AT5G38830,AT5G38030,AT5G35730,AT5G24290,AT5G23010,AT5G23020,AT5G22740,AT5G18500,AT5G14040,AT5G11700,AT5G08260,AT5G05820,AT5G05960,AT3G59760,AT3G58990,AT3G55360,AT3G54260,AT3G44990,AT3G44320,AT4G38510,AT4G37450,AT4G36360,AT4G33410,AT4G30996,AT4G30810,AT4G30530,AT4G28440,AT4G23740,AT4G18610,AT4G13770,AT4G12880,AT4G12030,AT1G18250,AT3G22850,AT3G19710,AT3G27300,AT3G15000,AT3G24180,AT3G20370,AT3G15950,AT3G25290,AT3G25540,AT3G21190,AT3G14310,AT3G02640,AT3G02630,AT3G10380,AT3G11490,AT3G16450,AT1G12360,AT1G77690,AT1G64390,AT1G68810,AT1G43650,AT1G21440,AT1G45160,AT1G07370,AT1G63000,AT1G12850,AT1G28400,AT1G76090,AT1G16060,AT1G80690,AT1G22550,AT1G02730,AT1G74790,AT1G21750,AT1G11790,AT1G54115,AT2G24762,AT1G26850,AT2G46370,AT2G22330,AT1G11840,AT1G10290,AT1G43130,AT1G67110,AT1G61580,AT1G62640,AT2G13820,AT2G18730,AT2G29440,AT2G27000,AT2G43100,AT2G06925,AT2G03090,AT2G30990,AT2G34710,AT2G19340,AT2G26230,AT2G26760,AT5G11110,AT1G44800,AT1G44575,AT5G08280,AT5G20150,AT5G15830,AT5G63450,AT5G61660,AT5G60850,AT5G57630,AT5G50840,AT5G17230,AT5G03040,AT3G57630,AT3G57610,AT3G47470,AT4G30660,AT4G29690,AT4G29700,AT4G28706,AT4G24620,AT4G20460,AT1G07080,AT3G20015,AT3G20100,AT3G26290,AT3G13040,AT3G06035,AT3G03190,AT3G10050,AT3G01810,AT3G04870,AT1G02330,AT1G69830,AT2G43535,AT1G78370,AT1G21560,AT1G01070,AT1G08380,AT1G30510,AT1G78000,AT2G01120,AT1G70890,AT1G49470,AT1G14120,AT1G79470,AT1G05710,AT2G31790,AT2G36870,AT2G28470,AT1G78680,AT1G23010,AT1G27140,AT2G01970,AT2G15970,AT2G32170,AT2G01140,AT2G01270,AT2G02220,AT2G29630,AT2G44100,AT3G14580,AT1G53490,AT5G67330,AT3G53230,AT1G03470,AT3G08040,AT1G76800,AT4G16680,AT5G25840,AT5G58650,AT5G55620,AT5G52640,AT5G51440,AT5G51010,AT5G45340,AT5G17170,AT5G15120,AT5G15190,AT5G12030,AT5G11160,AT5G07010,AT5G01670,AT3G50930,AT3G43190,AT4G33070,AT4G27450,AT4G26890,AT4G24110,AT3G28210,AT3G27220,AT3G28050,AT1G12030,AT3G21270,AT3G02550,AT3G10040,AT3G01350,AT3G01490,AT3G05120,AT1G69050,AT1G76650,AT1G74450,AT1G74310,AT1G07500,AT1G28370,AT1G33055,AT2G14210,AT2G04070,AT2G21640,AT1G60190,AT1G77120,AT4G25030,AT2G23170,AT4G16370,AT5G04150,AT5G20830,AT5G67370,AT5G60280,AT5G53450,AT5G44730,AT5G13740,AT5G07390,AT5G05250,AT5G02580,AT3G56980,AT3G51670,AT3G18290,AT3G12900,AT3G12820,AT3G27060,AT3G25250,AT3G17770,AT1G56430,AT1G80360,AT1G47400,AT1G34670,AT1G64980,AT2G21540,AT2G42750,AT1G23020,AT5G13910,AT5G01060,AT4G29780,AT4G25700,AT4G22890,AT4G13090,AT4G09110,AT3G19580,AT1G32870,AT2G41480,AT2G41540,AT2G41660,AT4G15920,AT5G22060,AT5G04170,AT1G58080,AT5G09480,AT1G51850,AT1G31730,AT5G67210,AT5G63850,AT5G64030,AT5G62630,AT5G62130,AT5G62390,AT5G62420,AT5G59480,AT5G58510,AT5G55970,AT5G55180,AT5G55200,AT5G55310,AT5G54800,AT5G51410,AT5G51630,AT5G49350,AT5G44550,AT5G42740,AT5G37690,AT5G24660,AT5G23830,AT5G12970,AT5G12040,AT5G09870,AT5G07030,AT5G05160,AT5G04950,AT5G03840,AT5G03760,AT5G03380,AT5G02380,AT5G01460,AT3G59710,AT3G57330,AT3G54990,AT3G52900,AT3G51330,AT3G50740,AT3G50660,AT3G47640,AT3G45980,AT4G39820,AT4G39350,AT4G38630,AT4G34160,AT4G29740,AT4G29330,AT4G28250,AT4G25320,AT4G25640,AT4G25240,AT4G23885,AT4G24140,AT4G23470,AT4G20390,AT4G11820,AT4G02600,AT4G02075,AT4G00900,AT4G00440,AT1G19270,AT1G07140,AT3G02360,AT3G21070,AT3G20130,AT3G27200,AT3G26590,AT3G18400,AT3G16910,AT3G19400,AT3G25900,AT3G02910,AT3G05890,AT3G07100,AT3G07320,AT3G04910,AT3G10340,AT3G01680,AT3G03610,AT3G01260,AT1G01610,AT1G64400,AT1G49820,AT1G72180,AT1G72300,AT1G72700,AT1G76550,AT1G78090,AT1G36370,AT1G80280,AT1G80340,AT2G47200,AT1G53310,AT1G78320,AT1G04770,AT1G50560,AT1G35580,AT1G80190,AT1G73080,AT1G11310,AT1G62800,AT1G28680,AT1G79440,AT1G65840,AT1G75500,AT1G75730,AT1G23330,AT2G17500,AT1G05520,AT2G14100,AT2G42580,AT2G21600,AT1G31130,AT2G24570,AT2G36880,AT2G36910,AT2G42790,AT2G21050,AT2G27920,AT1G04220,AT2G25180,AT1G08990,AT1G76950,AT1G27000,AT1G24430,AT1G51980,AT2G28410,AT2G18090,AT2G37280,AT2G05830,AT2G02130,AT2G27550,AT2G46710,AT2G03200,AT2G19410,AT2G40070,AT2G39700,AT2G32990,AT2G26690,AT2G26730,AT5G67030,AT5G24120,AT3G47650,AT4G34000,AT1G58360,AT2G16990,AT1G22770,AT5G64170,AT3G49580,AT4G34180,AT4G31330,AT4G23496,AT4G22270,AT3G16800,AT3G22840,AT2G43800,AT1G06040,AT1G78580,AT2G01890,AT2G01980,AT2G02120,AT2G01470,AT2G45400,AT4G17215,AT5G04220,AT5G19970,AT5G04820,AT5G66120,AT5G53850,AT5G47910,AT5G45070,AT5G38820,AT5G36890,AT5G03570,AT5G02780,AT5G01700,AT3G61930,AT3G61410,AT3G58810,AT3G58060,AT3G56360,AT3G53480,AT3G53260,AT3G52880,AT3G51540,AT3G48450,AT3G46900,AT4G38830,AT4G31940,AT4G30490,AT4G30120,AT4G29220,AT4G29230,AT4G24380,AT4G19680,AT4G19690,AT4G19370,AT4G02940,AT4G02330,AT1G19850,AT1G51680,AT1G56320,AT3G21240,AT3G06890,AT3G01860,AT3G07720,AT3G11430,AT1G18910,AT1G71400,AT1G55940,AT2G43670,AT1G02500,AT1G80240,AT1G56160,AT1G73120,AT1G34760,AT2G01880,AT2G40370,AT1G78950,AT1G77280,AT1G09560,AT1G09790,AT2G46740,AT2G38110,AT2G30070,AT2G32720,AT2G45590,AT1G16150,AT1G05530 CHODAVARAPU_GT1000GENESSTARTSTOPEXPRESSION_DIFF Diff-The number of unique hits per million are shown for Arabidopsis genes greater than 1000 bases long in wild type shoots. A value of 0 indicates that, at the level of sequencing depth used in this work, no reads aligning uniquely to that particular transcript were found. (Table S2 PubmedID:20512117) AT3G49120,AT1G02780,AT1G20440,AT3G46780,AT1G11910,AT3G11630,AT3G55800,AT1G10095,AT3G50820,AT5G09810,AT1G59870,AT2G30950,AT3G27690,AT1G64720,AT5G42980,AT1G37130,AT5G13930,AT5G52310,AT3G04120,AT2G28190,AT4G23670,AT4G20360,AT1G32060,AT2G37220,AT4G04640,AT1G56070,AT3G57260,AT1G76180,AT3G60750,AT4G16190,AT2G15970,AT1G67740,AT4G01150,AT4G33010,AT1G42970,AT4G32260,AT2G34430,AT1G04410,AT2G05070,AT1G74470,AT1G30380,AT3G12780,AT4G39090,AT3G14210,AT3G26650,AT3G45140,AT1G35720,AT3G56940,AT4G38770,AT2G05100,AT5G50920,AT5G02500,AT4G28750,AT5G25610,AT4G37930,AT3G16640,AT4G05180,AT1G08380,AT1G15820,AT5G01530,AT3G61470,AT1G31330,AT1G29920,AT4G12800,AT1G29910,AT5G54770,AT5G66570,AT5G54270,AT1G06680,AT4G21960,AT3G47470,AT4G10340,AT2G34420,AT1G29930 NODINE_DCL1-EARLY-GLOBULAR-EMBRYOS/WT_UP Up-miRNA targets significantly up-regulated at least two-fold in dcl1 early globular embryos relative to wild-type (Table S1 PubmedID:21123653) AT3G57230,AT1G48410,AT1G31280,AT4G36920,AT3G22890,AT5G43780,AT2G28350,AT1G77850,AT1G30330,AT5G37020,AT5G10180,AT1G11810,AT1G27340,AT1G62910,AT1G63080,AT1G63130,AT1G76810,AT2G45160,AT3G22470,AT3G23690,AT3G60630,AT5G60760,AT5G67180,AT5G41610,AT2G22840,AT4G32880,AT2G28190,AT5G06100,AT3G11440,AT5G12840,AT1G17590,AT1G02860,AT2G34710,AT2G33770,AT1G30490,AT5G60690,AT3G57920,AT5G43270,AT2G42200,AT2G22740,AT3G17185,AT1G53230,AT3G15030,AT5G60120 FOWLER_COLD_WS-2_UP Upregulated genes in Ws-2 ecotype with cold treatment (Table S1/2 PubmedID:12172015) AT2G40140,AT5G66390,AT1G49450,AT1G10080,AT4G27410,AT3G21150,AT4G27360,AF003102,AT2G22860,AT5G08620,AT1G08890,AT4G15480,AT2G46790,AT4G12470,AT5G59820,AT5G47230,AT2G47890,AT4G12480,AT2G23760,AT3G22840,AT3G22310,AT1G14170,AT2G41260,AT1G65310,AT2G43290,AT5G15970,AT2G28900,AT2G22590,AT4G15430,AT5G46900,AT1G05170,AT4G08260,AT1G52100,AT1G62660,AT1G54000,AT4G36010,AT1G61380,AT1G22770,AT2G39040,AT5G57560,AT2G05380,AT3G53260,AT2G40900,AT5G44110,AT1G10550,AT1G23710,AT2G29440,AT1G30700,AT1G47710,AT5G52310,AT3G16860,AT1G46768,AT2G32210,AT5G42180,AT2G23290,AT4G33920,AT2G31380,AT4G25630,AT4G19120,AT2G18900,AT3G50060,AT1G08920,AT3G50970,AT3G21490,AT4G34990,AT2G39710,AT2G36220,AT5G20230,AT4G25470,AT2G45680,AT1G64890,AT2G15970,AT1G62570,AT4G01870,AT2G23170,AT3G15540,AT4G18010,AT5G23300,AT4G04330,AT1G19050,AT1G27730,AT1G62180,AT4G14580,AT1G10370,AT4G11280,AT4G27280,AT2G16890,AT2G40000,AT2G30040,AT2G28400,AT2G42530,AT4G19030,AT2G22500,AT4G17550,AT1G01470,AT4G17490,AT3G55610,AT5G52300,AT4G15910,AT1G10410,AT4G21570,AT4G38960,AT1G30640,AT2G45660,AT4G27820,AT4G16780,AT2G38470,AT5G67400,AT1G52050,AT5G15850,AT4G26220,AT2G47180,AT1G13260,AT1G04220,AT4G29510,AT1G20450,AT1G62710,AT1G43160,AT2G41010,AT4G25490,AT3G27330,AT2G30020,AT4G25480,AT4G03400,AT4G23500,AT2G14610,AT4G37320,AT3G01190,AT1G04570,AT4G12750,AT1G65390,AT2G46970,AT4G17090,AT2G24560,AT2G21320,AT1G05250,AT4G25730,AT4G20170,AT2G18890,AT4G23750,AT3G51895,AT1G09350,AT1G60470,AT3G49960,AT2G35710,AT5G47370,AT4G33070,AT2G23340,AT1G52070,AT5G37770,AT2G32020,AT5G20830,AT4G23810,AT4G27560,AT2G31360,AT2G47990,AT5G40420,AT2G41640,AT4G27520,AT2G17280,AT3G27170,AT2G23120,AT5G04340,AT3G55120,AT4G30170,AT1G60190,AT4G18390,AT1G78600,AT1G11960,AT4G25820,AT1G20440,AT2G24110,AT3G47800,AT3G47500,AT5G06760,AT2G27420,AT4G32190,AT4G14560,AT3G23000,AT4G35320,AT1G66270,AT3G61890,AT3G15210,AT2G43060,AT1G02810,AT2G28550,AT1G21670,AT1G10270,AT4G34740,AT4G20860,AT1G03520,AT2G34930,AT4G04940,AT3G15450,AT2G17840,AT4G37260,AT4G33550,AT5G08640,AT2G39200,AT1G22730,AT1G06180,AT3G51240,AT4G38400,AT4G35480,AT5G17820,AT1G12370,AT5G67300,AT2G02120,AT4G01250,AT3G48100,AT4G33980,AT2G41190,AT1G15440,AT4G22470,AT2G27080,AT4G19810,AT3G48340,AT2G46830 FOWLER_COLD_WS-2_DN Downregulated genes in Ws-2 ecotype with cold treatment (Table S3 PubmedID:12172015) AT5G18170,AT1G28670,AT2G35690,AT1G55920,AT4G22690,AT1G10360,AT1G16410,AT2G22330,AT2G23600,AT2G29340,AT4G15550,AT5G24160,AT5G14740,AT3G01500,AT1G10960,AT1G19150,AT1G51400,AT2G20260,AT2G40100,AT1G69490,AT2G33480,AT4G14540,AT4G39780,AT4G40060,AT5G07700,AT1G09140,AT1G23860,AT4G26160,AT2G22990,AT2G38870,AT2G37170,AT4G17340,AT1G64780,AT4G37800,AT1G69530,AT2G39700,AT2G40610,AT2G46330,AT4G12550,AT4G19420,AT4G24780,AT4G24780,AT1G04350,AT1G11050,AT1G21270,AT1G55020,AT1G76680,AT2G15680,AT4G21410,AT4G28270,AT4G35770,AT1G75040,AT2G43570,AT3G16460,AT3G57260,AT4G19530,AT2G29420,AT2G37130,AT4G37520,AT5G64100,AT2G19310,AT3G12580,AT4G13830,AT5G52640,AT2G16660,AT2G30810,AT3G26740,AT4G38840,AT1G23205,AT1G62480,AT2G04690,AT2G14560,AT2G16590,AT2G22660,AT2G24150,AT2G32880,AT2G34170,AT2G35820,AT2G37340,AT2G42610,AT3G46780,AT3G52070,AT4G00780,AT4G14400,AT4G27450,AT4G33960,AT4G35750,18060_i_at,12846_s_at DOHERTYA_COLD_CAMTA3_UP Upregulated genes early in response to treatment at 4 degree in CAMTA mutants (Table 1 PubmedID:19270186) AT1G19050,AT1G21050,AT1G21910,AT1G27730,AT1G68840,AT1G74890,AT1G76600,AT1G80440,AT1G80840,AT2G25900,AT2G26530,AT2G38470,AT3G15450,AT3G48100,AT3G48360,AT3G55980,AT4G01250,AT4G24570,AT4G25470,AT4G25480,AT4G29780,AT4G34150,AT4G36040,AT4G37610,AT5G20230,AT5G28770,AT5G37260,AT5G57560,AT5G59820,AT5G62920 RAFAEL_HY5_COLD_ACCLIMATION_RESPONSE_REDUCED_EXPRESSION Genes with reduced expression in hy5-1 respect to Ler after one day of exposure to 4 degree AT5G06530,AT4G01985,AT2G40590,AT1G16515,AT4G21100,AT1G60640,AT3G44870,AT3G01060,AT5G21105,AT1G67865,AT1G23080,AT1G46768,AT1G30530,AT3G05545,AT3G48570,AT3G22231,AT1G03930,AT3G18440,AT5G46780,AT5G17380,AT5G44400,AT2G07698,AT3G05900,AT3G23300,AT2G21860,AT5G51290,AT5G03460,AT2G23120,AT3G27550,AT3G14205,AT3G49490,AT5G24210,AT3G17800,AT3G55880,AT5G53880,AT4G00180,AT1G78170,AT2G23910,AT3G60990,AT5G04590,AT4G30470,AT3G62410,AT2G40280,AT1G25275,AT1G64430,AT3G25250,AT5G24660,AT5G66540,AT1G74320,AT2G33855,AT5G67490,AT3G17430,AT5G19990,AT3G14840,AT2G28720,AT4G16990,AT1G02280,AT5G39000,AT1G07135,AT2G36870,AT5G17790,AT1G06720,AT4G01150,AT3G22380,AT3G55120,AT3G30300,AT5G42070,AT1G45332,AT5G41140,AT4G28880,AT4G13520,AT5G16110,AT1G18090,AT3G17609,AT4G39840,AT5G66055,AT2G03670,AT3G01830,AT5G17910,AT5G47550,AT1G77600,AT4G38290,AT5G30510,AT5G50310,AT2G36580,AT3G19810,AT4G01680,AT4G22690,AT5G36290,AT1G79140,AT4G12735,AT2G24790,AT3G07700,AT5G42030,AT2G22360,AT1G79280,AT2G14560,AT1G24706,AT2G41090,AT4G02390,AT1G36240,AT3G50930,AT1G19200,AT5G47780,AT1G35230,AT1G68910,AT5G03180,AT1G07820,AT5G40340,AT2G19260,AT3G19490,AT3G20920,AT4G13550,AT5G52570,AT4G25700,AT5G55450,AT2G31270,AT3G24820,AT2G18660,AT5G14920,AT1G73110,AT4G05070,AT5G64770,AT1G02910,AT1G44446,AT3G53350,AT1G21690,AT3G63400,AT5G64400,AT1G26150,AT3G51880,AT5G46210,AT1G74790,AT2G25990,AT5G35460,AT5G49530,AT5G53530,AT1G72440,AT3G57260,AT5G43750,AT5G50340,AT1G08130,AT1G08530,AT1G17110,AT3G03710,AT4G23020,AT5G49820,AT5G64580,AT2G30700,AT3G19370,AT1G22882,AT3G11170,AT3G20015,AT2G39080,AT3G01170,AT4G08700,AT2G39210,AT3G09480,AT2G06510,AT3G14640,AT3G21820,AT4G29520,AT2G04530,AT3G21240,AT5G53530,AT1G62850,AT2G32210,AT5G45030,AT1G34770,AT5G47620,AT1G06910,AT1G52160,AT3G06690,AT5G15450,AT1G12270,AT1G34750,AT1G69750,AT4G12750,AT4G26950,AT4G31030,AT4G37380,AT2G19680,AT2G22170,AT3G21290,AT5G35450,AT5G48590,AT5G53530,AT1G05870,AT1G42550,AT1G64370,AT2G17340,AT5G50580,AT1G16540,AT4G26240,AT5G25840,AT5G37770,AT5G56010,AT1G61870,AT2G16480,AT2G38940,AT4G08480,AT4G38500,AT5G10150,AT1G62560,AT5G20670,AT5G22220,AT5G44565,AT2G17120,AT3G52770,AT2G26580,AT4G01880,AT5G06610,AT1G08540,AT2G01600,AT3G46530,AT3G46620,AT5G56890,AT1G66590,AT3G44630,AT4G00290,AT1G31870,AT1G73460,AT2G24395,AT3G08955,AT3G29000,AT5G07900,AT5G47690,AT2G16890,AT2G17560,AT2G45500,AT3G51440,AT5G43210,AT3G52370,AT4G33050,AT1G21120,AT2G39670,AT4G14930,AT4G25720,AT5G40720,AT5G64940,AT1G54000,AT1G64060,AT1G72740,AT2G34050,AT1G52930,AT1G61770,AT2G32160,AT4G14550,AT4G29770,AT4G36080,AT5G53530,AT1G09150,AT1G58520,AT1G62305,AT2G16900,AT2G27420,AT3G05270,AT3G18240,AT4G08555,AT4G32050,AT1G73650,AT2G21280,AT2G27395,AT3G48760,AT4G05420,AT4G34120,AT5G12080,AT5G35730,AT5G44800,AT3G19170,AT3G49810,AT4G17940,AT5G42660,AT5G53530,AT5G67030,AT1G14170,AT1G52870,AT4G18020,AT5G51190,AT5G59550,AT1G26940,AT1G80480,AT2G46440,AT4G05440,AT5G47090,AT1G10290,AT1G75190,AT2G38950,AT3G06070,AT3G43520,AT4G13980,AT5G09840,AT5G53530,AT5G58200,AT1G08780,AT3G07050,AT4G27540,AT4G34560,AT5G15850,AT5G43320,AT1G67140,AT1G73090,AT2G25760,AT3G07390,AT3G60245,AT3G63170,AT4G22190,AT5G01350,AT5G28540,AT5G53530,AT5G57210,AT1G07090,AT1G76450,AT2G23390,AT3G02400,AT3G23740,AT4G34000,AT5G45950,AT5G50680,AT1G13460,AT1G17550,AT1G33980,AT1G49720,AT3G18020,AT3G44200,AT4G29110,AT5G49910,AT1G18810,AT1G20816,AT1G64780,AT1G75600,AT3G24190,AT3G30180,AT3G45020,AT4G17470,AT4G34140,AT5G18240,AT5G52950,AT1G72300,AT2G20020,AT2G38750,AT3G04210,AT3G48800,AT3G59820,AT4G35570,AT5G41790,AT1G33340,AT3G11745,AT3G23070,AT5G03345,AT5G04250,AT5G64130,AT5G64560,AT1G01060,AT1G59590,AT1G61030,AT1G63090,AT1G76810,AT2G26470,AT2G43850,AT2G46420,AT2G47830,AT3G16310,AT3G16520,AT4G23320,AT1G18150,AT1G55690,AT1G80810,AT3G13845,AT4G39190,AT5G22950,AT5G64760,AT1G15940,AT2G04690,AT2G36490,AT4G11060,AT5G18410,AT5G42760,AT5G46490,AT5G56030,AT1G29430,AT1G73390,AT3G06547,AT3G07060,AT3G09370,AT3G58180,AT4G00990,AT4G15450,AT4G29490,AT5G21482,AT5G41460,AT5G46750,AT5G59240,AT1G52760,AT1G58848,AT1G79080,AT1G80180,AT2G07750,AT2G17410,AT2G34300,AT4G18210,AT4G18910,AT4G32915,AT4G33140,AT4G33260,AT5G19540,AT5G23395,AT5G23750,AT5G46500,AT1G36640,AT2G05380,AT2G07640,AT3G18000,AT5G54300,AT5G59980,AT1G14610,AT1G31970,AT1G56660,AT1G67700,AT2G01190,AT2G41250,AT3G29390,AT5G09650,AT5G25230,AT5G39570,AT5G57345 ZHU_COLD_TOLERANCE_HOS15_UP Genes with increased expression levels by 2-fold in hos15 determined by Affymetric microarray AT2G38470,AT4G18880,AT3G56400,AT2G46400,AT4G31800,AT4G21850,AT5G10760,AT3G56710,AT2G40750,AT1G54160,AT2G43060,AT4G04510,AT4G23130,AT3G47570,AT5G26920,AT2G41090,AT3G47480,AT1G73805,AT1G35710,AT5G01540,AT4G04540,AT2G37710,AT4G23200,AT5G03350,AT4G11890,AT4G23140,AT5G55560,AT5G64000,AT3G45860,AT4G23150,AT4G23210,AT5G60900,AT1G73800,AT5G39670,AT2G41100,AT2G41410,AT1G27770,AT4G33050,AT1G66880,AT4G23220,AT3G50770,AT1G69730,AT2G31880,AT4G18880,AT3G50950,AT5G06320,AT4G39640,AT3G47570,AT4G13900,AT4G26120,AT1G56510,AT3G48090,AT2G14610,AT3G57260,AT5G52740,AT3G57240,AT5G52760,AT1G03850,AT2G43620,AT1G75040,AT4G31500,AT5G04720,AT1G72280,AT1G33560,AT4G04220,AT2G20145,AT4G39030,AT4G33300,AT1G02930,AT5G22500,AT3G26220,AT5G24530,AT3G26210,AT4G10500,AT1G33720,AT3G19010,AT1G07380,AT1G74710,AT1G43910,AT3G50930,AT1G67810,AT5G55450,AT3G52430,AT2G04450,AT4G12720,AT2G19130,AT2G23170,AT4G27260,AT5G13320,AT4G02330,AT5G10760,AT2G26440,AT2G30550,AT1G35230,AT3G11820,AT1G30900,AT5G18780,AT2G26390,AT4G04510,AT3G47570,AT2G41090,AT5G01540,AT4G04540,AT5G18470,AT5G63330,AT4G14365,AT5G10380,AT1G08050,AT5G61900,AT3G51860,AT1G30900,AT4G35180,AT5G50200,AT2G46440,AT5G46050,AT1G76970,AT5G13320,AT2G18660,AT1G21250,AT3G13100,AT2G17040,AT4G36110,AT1G34180,AT5G54610,AT4G03450,AT5G45110,AT2G23810,AT5G13190,AT3G22231,AT2G32800,AT5G55420,AT1G03290,AT4G23880,AT5G19240,AT2G04460,AT2G18690,AT1G14870,AT3G18250,AT5G66640,AT5G44570,AT5G25260,AT3G60420,AT2G14560,AT1G21520,AT1G15010,AT1G02450 ZHU_COLD_TOLERANCE_HOS15_DN Genes with decreased expression levels in hos15 determined by Affymetrix microarray AT5G67320,AT1G72360,AT1G10585,AT5G24780,AT1G62510,AT1G60590,AT4G24450,AT2G28305,AT4G14130,AT4G24670,AT1G14250,AT5G44050,AT1G07450,AT2G33530,AT1G27540,AT2G37770,AT5G50740,AT3G13650,AT4G12980,AT1G52690,AT3G28270,AT3G28220,AT1G76530,AT3G15720,AT5G17220,AT2G41990,AT3G62460 SANDY_WRKY15_OSMOTIC_STRESS_TOLERANCE_UP Constitutively upregulated transcripts in WRKY15 plants AT2G23320,AT5G64510,AT5G24780,AT3G08970,AT1G52040,AT1G23730,AT5G24770,AT3G16360,AT2G23010,AT3G08860,AT4G23600,AT3G25760,AT1G04980,AT5G52310,AT3G05400,AT1G14360,AT2G44460,AT3G25770,AT2G02810,AT2G42530,AT2G39330,AT1G65040,AT5G62360,AT4G30650,AT4G17470,AT3G60140,AT4G04830,AT1G18870,AT1G52400,AT1G77510,AT3G28220,AT3G45140,AT2G22190,AT1G52000,AT5G05600,AT2G42540,AT1G28330,AT5G61790,AT1G15125,AT5G42020,AT5G48850,AT1G52030,AT3G62550,AT1G14240,AT5G57340,AT1G17190,AT2G04170,AT4G29520,AT5G28540,AT5G65730,AT4G16660,AT3G62600,AT5G46830,AT1G20450,AT5G60200,AT1G18265,AT5G23020,AT2G25110,AT1G79460,AT1G27150,AT1G56340,AT5G17700,AT1G21750,AT1G09210,AT1G71140,AT5G19740,AT1G23130,AT1G53035,AT3G05640,AT4G33490,AT1G75290,AT4G11320,AT3G12520,AT1G20440,AT3G23550,AT1G22370,AT3G50440,AT1G54160,AT4G14270,AT2G16750,AT1G68600,AT1G80050,AT1G54040,AT1G29395,AT1G56300,AT4G30630,AT2G43535,AT5G02940,AT3G43670,AT5G55990,AT3G28270,AT5G14550,AT1G75280,AT1G52410,AT5G07340,AT5G23050,AT3G07350,AT3G14020,AT1G01010,AT1G35720,AT4G19420,AT4G24190,AT4G27560,AT4G09020,AT5G22580,AT3G05030,AT3G53670,AT3G28370,AT5G57110,AT2G14520,AT2G40970,AT3G63210,AT3G52180,AT2G36350,AT5G26570,AT2G47470,AT2G43550,AT5G23575,AT1G13280,AT3G02040,AT5G61290,AT4G24450,AT1G49720,AT5G58710,AT1G14010,AT1G20630,AT2G35520,AT1G22770,AT1G36370,AT2G43020,AT1G19570,AT3G53800,AT1G78680,AT3G23090,AT5G50460,AT3G17860,AT3G18080,AT1G12845,AT5G63800,AT5G24155,AT5G27280,AT3G03150,AT5G20410,AT1G28050,AT1G73630,AT5G64860,AT4G21910,AT4G11360,AT1G64370,AT4G15540,AT4G13250,AT3G28080,AT5G47420,AT3G24090,AT2G20100,AT2G27190,AT4G04610,AT1G13930,AT5G23980,AT2G06050,AT3G06300,AT2G38400,AT1G70700,AT1G49990,AT5G50950,AT4G13990,AT1G17455,AT1G70640,AT3G22970,AT5G42650,AT2G36390,AT3G12970,AT4G24960,AT5G58000,AT1G06640,AT4G34230,AT1G67960,AT5G44005,AT1G72830,AT3G62750,AT3G51980,AT1G04990,AT5G65020,AT1G54100,AT4G27440,AT4G39090,AT1G68570,AT4G15450,AT1G11840,AT4G15330,AT1G10070,AT1G31850,AT5G50160,AT1G50480,AT4G00440,AT5G14940,AT1G60140,AT4G34630,AT5G03160,AT4G29700,AT5G43950,AT1G27660,AT5G22630,AT5G47250,AT2G14050,AT5G13550,AT1G76180,AT1G63300,AT2G28900,AT3G20120,AT5G62350,AT2G22970,AT3G46970,AT1G70820,AT1G29310,AT3G22200,AT4G18440,AT4G24350,AT1G80650,AT1G69510,AT1G53580,AT5G20830,AT5G54390,AT1G49470,AT3G28130,AT4G14420,AT3G54960,AT3G59210,AT4G00780,AT3G10575,AT3G29320,AT3G01750,AT3G53990,AT5G05160,AT2G38460,AT2G28470,AT3G45010,AT4G19840,AT2G22660,AT3G55760,AT2G38800,AT5G27350,AT4G05150,AT5G66420,AT1G10760,AT3G52840,AT1G16750,AT4G03060,AT4G30960,AT3G28050,AT5G58600,AT4G31890,AT1G69780,AT5G60860,AT4G11450,AT1G10200,AT4G18425,AT5G10550,AT3G57780,AT1G67590,AT3G43270,AT2G21380,AT5G08370,AT5G16550,AT4G26530,AT4G11600,AT5G56270,AT1G69450,AT4G34980,AT3G12120,AT2G03480,AT4G35320,AT2G32630,AT5G42450,AT1G75800,AT1G61790,AT4G20270,AT5G58340,AT2G41370,AT5G66880,AT1G48420,AT3G44320,AT1G04430,AT2G21660,AT4G34900,AT4G17140,AT4G18240,AT1G67750,AT1G64660,AT1G68710,AT4G16870,AT5G41920,AT1G79060,AT5G41460,AT5G61190,AT1G24450,AT5G66040,AT3G01310,AT2G28510,AT1G56280,AT2G46490,AT3G02020,AT2G36895,AT2G03120,AT3G08920,AT5G04885,AT1G71220,AT5G48880,AT1G14790,AT1G60870,AT2G40940,AT2G13600,AT5G48960,AT1G12240,AT2G47650,AT3G27310,AT1G74920,AT2G22900,AT4G25660,AT4G12030,AT2G42320,AT1G77690,AT3G15840,AT4G14880,AT2G47600,AT1G75380,AT5G63980,AT5G48180,AT5G11580,AT2G33860,AT2G18630,AT5G57130,AT2G22540,AT5G47650,AT1G62560,AT2G45720,AT3G04910,AT5G64380,AT5G53460,AT3G43800,AT4G34920,AT5G08260,AT4G16330,AT5G23010,AT4G32980,AT4G32480,AT5G52560,AT4G12460,AT1G49240,AT1G31710,AT5G07690,AT3G14310,AT3G52370,AT5G04885,AT2G24280,AT2G39890,AT5G49650,AT4G20890,AT5G58300,AT3G09070,AT2G35190,AT4G13360,AT5G51140,AT1G11600,AT2G26230,AT3G02630,AT4G30910,AT5G62890,AT2G21250,AT2G46870,AT1G56330,AT2G32920,AT5G56760,AT5G17990,AT3G17810,AT5G65683,AT5G21100,AT5G65960,AT3G05430,AT4G24220,AT3G12290,AT1G12050,AT5G57930,AT3G12490,AT1G05570,AT5G51970,AT3G16500,AT4G29960,AT4G34260,AT5G65630,AT3G26150,AT5G65310,AT4G00720,AT3G51510,AT2G17695,AT1G02960,AT3G10570,AT2G34620,AT3G05415,AT4G35780,AT1G01140,AT3G15940,AT2G30870,AT1G18260,AT5G58200,AT1G06110,AT3G05165,AT5G39590,AT1G65010,AT5G65640,AT5G01500,AT5G10730,AT1G56700,AT5G01220,AT5G42420,AT2G33240,AT1G73170,AT2G39770,AT4G39980,AT3G63000,AT4G36030,AT2G43800,AT1G56220,AT3G44340,AT3G56140,AT1G68520,AT1G03310,AT4G17120,AT2G39930,AT1G78830,AT3G15730,AT4G08600,AT1G02180,AT1G60160,AT1G27340,AT3G54600,AT5G25760,AT4G21810,AT5G40060,AT1G77260,AT3G45310,AT4G11640,AT5G53750,AT4G19410,AT3G44310,AT3G53620,AT1G74090,AT1G02305,AT4G37300,AT1G77990,AT5G04590,AT2G39280,AT1G03160,AT5G16910,AT1G67660,AT5G02810,AT5G35170,AT1G27480,AT5G63640,AT1G68060,AT1G66350,AT3G45780,AT2G26540,AT4G39170,AT5G39570,AT1G24460,AT1G48540,AT5G46420,AT1G12230,AT3G15160,AT1G53280,AT4G33030,AT2G38670,AT1G78820,AT1G21065,AT3G10360,AT2G28840,AT4G29160,AT4G32060,AT3G14270,AT4G15545,AT3G44160,AT1G35340,AT4G01040,AT4G14760,AT1G21730,AT3G01370,AT5G60920,AT5G12250,AT4G27180,AT3G61700,AT3G06440,AT5G20280,AT2G46910,AT3G03790,AT4G16520,AT2G30860,AT3G62410,AT5G52460,AT4G34050,AT2G26730,AT5G18590,AT5G06390,AT1G51940,AT1G49340,AT5G53350,AT1G53910,AT4G38800,AT3G54440,AT4G18820,AT1G13980,AT5G57850,AT4G05040,AT2G29970,AT4G26510,AT1G63010,AT3G26950,AT3G25140,AT4G35790,AT5G61040,AT2G37640,AT1G31780,AT5G09870,AT1G78920,AT2G20570,AT1G01300,AT4G02500,AT1G63000,AT3G26070,AT1G04680,AT1G19950,AT4G15110,AT5G35180,AT2G34560,AT4G36195,AT3G62290,AT1G07250,AT4G38740,AT4G01800,AT1G27130,AT5G01920,AT2G05830,AT2G35130,AT1G53840,AT2G27860,AT2G39470,AT5G26780,AT2G34250,AT2G44160,AT1G24120,AT1G18270,AT3G21750,AT1G04710,AT4G35830,AT5G63840,AT5G01820,AT5G55540,AT1G51630,AT4G31530,AT1G49650,AT5G14260,AT3G09650,AT2G27680,AT4G02740,AT4G03200,AT5G03650,AT3G15095,AT4G38250,AT2G25800,AT3G06860,AT5G25980,AT3G02360,AT5G22030,AT5G53850,AT3G12810,AT5G43940,AT4G28760,AT2G22125,AT4G19900,AT1G21500,AT3G60860,AT1G48090,AT2G14835,AT2G29690,AT3G59970,AT2G42270,AT4G30020,AT4G34040,AT3G33530,AT1G77680,AT5G16590,AT5G23120,AT5G54770,AT5G64740,AT5G03280,AT3G01500,AT1G15690,AT5G01530 SANDY_WRKY15_OSMOTIC_STRESS_TOLERANCE_DN Constitutively downregulated transcripts in WRKY15 plants AT2G41730,AT4G11890,AT1G09932,AT2G18690,AT5G25260,AT5G42380,AT1G59590,AT5G54720,AT5G27420,AT5G22520,AT5G57560,AT5G59820,AT1G27730,AT5G40690,AT1G33720,AT2G32020,AT3G56980,AT2G36750,AT1G70530,AT3G59700,AT1G74870,AT1G16420,AT4G05370,AT4G11000,AT1G52200,AT2G31880,AT2G40140,AT3G22060,AT1G72520,AT5G26340,AT5G46710,AT3G29250,AT4G34150,AT5G14730,AT4G23260,AT1G47400,AT1G55450,AT2G05540,AT4G08850,AT5G48540,AT3G10720,AT3G01600,AT1G34750,AT4G29740,AT1G50400,AT2G17120,AT2G41640,AT1G64400,AT4G23270,AT5G24530,AT2G44500,AT5G45340,AT1G24147,AT4G38550,AT3G15357,AT5G05190,AT5G36910,AT2G46440,AT4G23200,AT2G30140,AT4G23190,AT3G50060,AT1G30755,AT1G71880,AT4G37770,AT5G38990,AT1G09560,AT2G17220,AT2G15040,AT4G34135,AT5G35735,AT3G22660,AT1G72940,AT2G29720,AT1G70250,AT5G54100,AT1G62300,AT2G28630,AT3G05320,AT4G17250,AT1G61380,AT1G13100,AT5G62470,AT2G37710,AT2G39660,AT2G44490,AT4G31550,AT1G66880,AT1G22280,AT1G01120,AT4G19515,AT1G35350,AT3G56060,AT4G30270,AT1G63750,AT2G29490,AT4G34390,AT3G13230,AT2G22810,AT3G12860,AT4G02410,AT5G39020,AT1G18390,AT2G28890,AT5G15550,AT2G37690,AT3G11820,AT2G26170,AT5G61010,AT5G03390,AT4G36500,AT5G66675,AT5G48380,AT3G48090,AT2G27840,AT1G72930,AT3G50740,AT3G23110,AT1G74790,AT3G17700,AT5G36930,AT5G14580,AT1G29670,AT1G51700,AT3G09720,AT5G61560,AT3G16810,AT5G44070,AT4G39640,AT5G65070,AT1G74440,AT3G26230,AT2G02220,AT2G16060,AT3G13150,AT4G18197,AT3G21780,AT5G62630,AT3G17609,AT4G11900,AT2G41835,AT1G71040,AT3G55470,AT1G67120,AT1G77050,AT3G46110,AT5G25610,AT1G22650,AT5G47910,AT4G18205,AT1G66970,AT1G59870,AT4G14440,AT4G36580,AT3G50950,AT2G24160,AT4G12600,AT3G48100,AT1G15440,AT3G13940,AT3G55510,AT3G51920,AT3G62150,AT5G16750,AT5G45380,AT3G26220,AT2G20960,AT4G23230,AT1G52315,AT3G56070,AT3G57530,AT3G07050,AT3G30827,AT5G08600,AT3G52040,AT3G57020,AT4G02420,AT2G19130,AT2G18900,AT1G13110,AT5G11240,AT1G61640,AT4G21380,AT2G27150,AT1G79150,AT5G61770,AT5G12940,AT1G30410,AT4G16680,AT4G17970,AT1G78930,AT1G04040,AT3G55950,AT1G72430,AT5G49630,AT5G02290,AT3G53810,AT1G73500,AT5G03700,AT1G12420,AT2G46330,AT1G29940,AT1G52930,AT5G06550,AT4G22380,AT3G57660,AT5G16930,AT3G57940,AT4G04180,AT4G23250,AT5G09840,AT1G66160,AT1G61360,AT1G42440,AT2G29340,AT1G29320,AT3G48720,AT3G56990,AT1G31540,AT5G04895,AT3G59670,AT4G10450,AT1G79470,AT3G27010,AT4G18905,AT3G12270,AT2G31060,AT2G28830,AT3G05060,AT3G57330,AT5G15700,AT4G32300,AT3G11964,AT4G30800,AT4G09420,AT3G51600,AT4G02930,AT4G01720,AT5G17300,AT5G39840,AT4G27940,AT1G29660,AT2G40270,AT1G10490,AT1G63780,AT1G11330,AT2G05380,AT1G48630,AT2G23200,AT1G52780,AT3G18130,AT5G26860,AT5G58120,AT1G65870,AT4G27010,AT5G55930,AT5G08660,AT1G27470,AT4G00900,AT5G61030,AT1G02820,AT4G28200,AT2G18220,AT4G15430,AT4G30990,AT1G01060,AT4G23540,AT1G53430,AT4G38150,AT2G26250,AT5G62920,AT1G64600,AT3G03060,AT1G48570,AT1G08450,AT3G52450,AT1G60640,AT5G26180,AT1G11310,AT5G67510,AT2G44860,AT4G37640,AT1G08610,AT1G02870,AT1G08580,AT3G18710,AT1G21270,AT3G03920,AT5G13400,AT1G63810,AT1G71850,AT3G28910,AT1G07630,AT1G03870,AT2G15080,AT1G20510,AT3G21650,AT2G37990,AT5G03380,AT2G47730,AT4G20020,AT2G36630,AT2G43650,AT1G18890,AT2G19640,AT1G13160,AT3G58700,AT3G19010,AT2G19670,AT2G26240,AT5G15090,AT2G46810,AT3G57490,AT1G18900,AT5G52070,AT3G55130,AT3G47380,AT3G29644,AT1G11050,AT4G25640,AT5G09510,AT1G72440,AT1G25390,AT5G47370,AT2G39390,AT4G23570,AT5G22650,AT5G56350,AT2G46830,AT2G30440,AT2G37270,AT4G01870,AT5G44580,AT4G00620,AT3G27740,AT1G30960,AT1G49540,AT2G20450,AT4G13750,AT5G62370,AT5G40770,AT3G04710,AT4G25700,AT3G26500,AT5G08620,AT3G06070,AT1G79390,AT5G65380,AT4G29510,AT5G04530,AT4G08510,AT5G11090,AT2G05940,AT3G49240,AT4G23850,AT1G26540,AT5G61020,AT1G63660,AT5G56260,AT2G38540,AT4G04670,AT4G10380,AT4G34910,AT3G10610,AT4G32720,AT1G63860,AT5G64140,AT5G06110,AT2G26710,AT1G48920,AT3G45260,AT1G28010,AT5G54910,AT5G15950,AT3G20470,AT3G06920,AT4G11300,AT5G60670,AT5G52570,AT1G06840,AT5G60030,AT4G27585,AT4G14610,AT5G17270,AT5G64420,AT1G03400,AT1G07650,AT3G04920,AT2G03820,AT1G07840,AT1G23030,AT2G02450,AT1G55040,AT1G64500,AT2G25140,AT1G05135,AT4G18100,AT1G02370,AT2G05520,AT5G59850,AT3G55280,AT3G47960,AT1G56140,AT3G17465,AT1G55900,AT4G16630,AT5G42250,AT1G75200,AT3G54470,AT3G01160,AT1G11300,AT2G24990,AT2G39990,AT3G61150,AT3G16080,AT1G71890,AT5G56980,AT3G04110,AT2G19740,AT5G15870,AT2G32060,AT3G66652,AT2G44820,AT2G32800,AT4G13900,AT5G02610,AT5G46510,AT5G67240,AT5G38980,AT1G72300,AT3G09200,AT3G16370,AT3G48930,AT5G16980,AT3G51800,AT4G11530,AT4G20170,AT1G21130,AT3G11710,AT3G07770,AT1G14300,AT2G45440,AT3G26410,AT3G52170,AT5G22440,AT1G07180,AT3G55010,AT5G39030,AT4G16720,AT3G24080,AT1G78210,AT5G35530,AT5G40480,AT1G23205,AT3G53280,AT1G79670,AT4G04570,AT3G55160,AT2G05120,AT5G09330,AT4G31210,AT5G25800,AT2G04030,AT4G18730,AT1G68530,AT2G31410,AT2G27400,AT3G23450,AT3G09630,AT1G33390,AT3G58180,AT3G16670,AT1G07570,AT4G16510,AT4G21090,AT5G43760,AT1G31970,AT5G37570,AT1G26880,AT5G56680,AT1G64670,AT3G11510,AT4G27340,AT3G05560,AT2G31870,AT2G40520,AT5G61170,AT5G06980,AT1G04270,AT2G21580,AT1G62390,AT3G12670,AT1G20780,AT2G36620,AT3G16780,AT3G62310,AT5G05920,AT5G61520,AT4G28780,AT2G47630,AT1G76550,AT2G40510,AT2G40000,AT1G27400,AT2G04570,AT4G36130,AT3G13160,AT2G02800,AT5G19820,AT3G56340,AT5G20920,AT1G10270,AT1G14320,AT4G33430,AT5G20050,AT5G52650,AT2G36170,AT2G19730,AT5G23740,AT3G13860,AT5G58420,AT4G01490,AT2G34480,AT3G07040,AT4G17390,AT3G60770,AT3G49910,AT5G22840,AT1G77550,AT5G27770,AT4G34740,AT4G31700,AT5G28060,AT1G55920,AT1G69530,AT1G47500,AT4G07410,AT3G20000,AT2G46280,AT3G56410,AT4G27640,AT5G47210,AT5G20270,AT5G48030,AT1G03370,AT1G01100,AT2G47610,AT1G04220,AT5G64850,AT4G39820,AT2G41840,AT1G73080,AT1G18540,AT1G15530,AT2G36220,AT1G27950,AT1G18740,AT1G28280,AT3G23990,AT5G03850,AT3G23940,AT2G34660,AT2G24120,AT4G10480,AT1G15930,AT5G42760,AT4G38710,AT2G42600,AT3G17970,AT2G20530,AT3G29030,AT2G27530,AT1G14810,AT5G19510,AT4G39840,AT5G45480,AT3G63390,AT3G49010,AT3G19360,AT3G56150,AT5G15810,AT3G14390,AT3G43510,AT4G20480,AT4G25740,AT1G09590,AT5G63410,AT3G27390,AT5G44290,AT4G26230,AT3G57610,AT5G22320,AT2G36410,AT2G21440,AT3G25520,AT4G00050,AT3G51780,AT2G19480,AT1G64790,AT1G33410,AT1G74260,AT3G51870,AT1G72370,AT5G39740,AT5G14800,AT5G25780,AT5G16130,AT1G14610,AT1G03740,AT1G04530,AT1G14980,AT1G55960,AT3G08730,AT1G80410,AT5G19855,AT2G41940,AT5G38530,AT4G34480,AT3G13000,AT3G04840,AT2G37250,AT1G75820,AT5G12470,AT1G49600,AT2G35720,AT3G54400,AT3G17910,AT2G15690,AT2G38230,AT1G63500,AT4G26110,AT4G10760,AT3G01650,AT5G06960,AT4G04890,AT1G47530,AT3G02760,AT5G08610,AT3G27570,AT5G16970,AT1G57680,AT3G02560,AT1G08360,AT5G50380,AT5G49440,AT3G53430,AT3G04480,AT2G42710,AT4G30190,AT5G20290,AT1G29340,AT5G49760,AT1G43170,AT3G53870,AT1G30680,AT5G66080,AT1G13440,AT5G03555,AT5G49230,AT2G16500,AT1G02780,AT5G44090,AT4G23430,AT1G05010,AT1G62960,AT5G42540,AT5G07180,AT1G21450,AT1G29900,AT1G37130,AT3G24830,AT2G43090,AT3G23050,AT5G46550,AT3G10650,AT3G62250,AT1G14740,AT1G64880,AT1G33590,AT1G09620,AT3G10490,AT1G80560,AT4G26690,AT3G63500,AT3G13580,AT1G24360,AT1G49760,AT4G34670,AT2G31750,AT1G22610,AT1G54270,AT2G47070,AT1G20330,AT1G69620,AT4G31770,AT4G10730,AT5G13780,AT1G16350,AT3G03960,AT5G12860,AT3G04120,AT5G66730,AT2G43710,AT2G29760,AT5G21160,AT1G06220,AT1G32580,AT2G31810,AT1G17840,AT3G09440,AT1G33980,AT5G26830,AT3G58610,AT3G61140,AT5G23880,AT1G53240,AT2G15050,AT1G09250,AT2G36530,AT3G07430,AT1G06950,AT1G05560,AT4G30610,AT1G67430,AT2G32690,AT2G20020,AT2G21330,AT2G33530,AT1G64550,AT2G27100,AT1G72610,AT5G11170,AT2G37410,AT1G30690,AT2G22360,AT3G06930,AT1G51980,AT1G02120,AT1G79930,AT4G17520,AT5G60390,AT1G29880,AT5G42950,AT3G15880,AT3G08850,AT1G14580,AT2G30470,AT3G51580,AT4G26300,AT5G19180 YOH_DREB2A_DROUGHT_AND_HEAT_STRESS_RESPONSE_UP Microarray analysis of 35S:DREB2A CA plants. Genes with fold change of >2 AT5G05410,AT5G03720,AT1G09350,AT1G52690,AT4G33720,AT4G27560,AT2G39030,AT3G17520,AT1G33540,AT3G50970,AT1G32860,AT3G55940,AT2G42540,AT1G52560,AT3G09390,AT1G01470,AT1G56600,AT5G52310,AT3G02480,AT4G36900,AT1G69870,AT4G36880,AT5G37440,AT4G36010,AT2G21180,AT3G10450,AT3G27660,AT3G12580,AT5G23220,AT1G20440,AT1G01940,AT1G73165,AT2G38530,AT3G53990,AT2G46140,AT5G59720,AT2G03690,AT1G67810,AT5G54960,AT3G09640,AT2G21660,AT3G55760,AT5G13210,AT1G61800,AT2G38090,AT4G11290,AT1G06320,AT4G25780,AT3G50010,AT5G52300,AT4G23680,AT1G55210,AT1G53540,AT2G23120,AT5G19890,AT5G64080,AT2G22470,AT5G43870,AT4G23600,AT5G39150,AT5G55180,AT2G05520,AT4G37320,AT5G39080,AT3G04720,AT3G61990,AT1G75750,AT3G23340,AT1G48000,AT3G55120,AT3G17110,AT5G67520,AT3G12500,AT1G49570,AT1G22180,AT5G12110,AT1G52270,AT1G49650,AT4G15910,AT4G21570,AT1G70510,AT1G71950,AT1G01340,AT5G62350,AT1G76590,AT2G32190,AT5G53980,AT1G32230,AT1G70800,AT1G75900,AT1G08890,AT5G39180,AT4G10040,AT5G01410,AT3G04010,AT2G23340,AT5G12080,AT5G48540,AT5G24570,AT5G16380,AT4G21320,AT1G56300,AT4G03320,AT5G61810,AT5G51570,AT4G15130,AT5G48070,AT5G40930,AT1G67820,AT5G44420,AT3G27930,AT5G48570,AT3G24500,AT1G03550,AT1G09070,AT5G54170,AT1G34580,AT4G38410,AT1G72175,AT4G02380,AT2G35900,AT5G42300,AT2G43510,AT1G62570,AT1G13390,AT2G39220,AT4G02890,AT3G25730,AT1G19610,AT1G27730,AT4G16670,AT2G32120,AT2G20560,AT4G35480,AT1G17020,AT1G16850,AT4G30280,AT4G27070,AT1G20450,AT3G19580,AT5G65750,AT2G19310,AT5G65300,AT5G51440,AT1G17710,AT1G11820,AT1G35720,AT4G30910,AT1G80120,AT4G25810,AT3G16500,AT1G18390,AT1G68500,AT1G33420,AT4G12490,AT2G32960,AT3G23170,AT2G30870,AT5G10790,AT4G16260,AT4G34740,AT3G56400,AT5G06570,AT5G64310,AT1G10370,AT1G72800,AT3G53280,AT1G23090,AT2G19580,AT4G03430,AT5G18400,AT3G53290,AT4G40090,AT2G24940,AT1G75950,AT3G09830,AT2G43620,AT5G37670,AT2G41550,AT5G17820,AT5G37500,AT4G29140,AT2G42530,AT5G39190,AT5G61660,AT5G03120,AT2G37870,AT1G47710,AT4G12500,AT4G12430,AT1G73880,AT1G13930,AT4G00710,AT3G03640,AT1G72070,AT5G17760,AT1G10170,AT5G55050,AT2G40880,AT5G67620,AT4G32460,AT3G60520,AT4G35730,AT5G15970,AT1G29395,AT1G75860,AT1G76180,AT2G24500,AT1G73260,AT3G44990,AT2G24050,AT3G01100,AT1G21010,AT4G29980,AT4G12040,AT4G25820,AT5G43170,AT3G01510,AT1G49740,AT2G34930,AT1G75220,AT4G33070,AT1G30870,AT1G80130,AT4G18070,AT2G36830,AT1G79660,AT4G19120,AT2G21490,AT2G23090,AT4G36000,AT4G18280,AT3G47960,AT1G09310,AT5G20790,AT2G36120,AT5G17550,AT5G39160,AT1G70900,AT3G25870,AT4G07990,AT1G20550,AT5G64430,AT5G40150,AT1G02930,AT5G42980,AT5G08040,AT5G02100,AT5G64870,AT5G05790,AT2G39020,AT4G29670,AT4G12400,AT5G52640,AT1G55020,AT5G07100,AT3G46000,AT5G13070,AT3G25590,AT3G15510,AT2G41190,AT1G27020,AT1G76930,AT5G47810,AT5G38710,AT3G22910,AT5G24530,AT2G02130,AT5G20910,AT2G34770,AT1G70810,AT1G36730,AT1G49700,AT5G09570,AT1G10830,AT2G16900,AT1G15380,AT1G20220,AT3G45970,AT5G66400,AT3G46640,AT5G47880,AT5G03030,AT3G27570,AT2G43020,AT1G45145,AT2G19450,AT4G13930,AT2G44310,AT5G66420,AT1G43890,AT5G47450,AT4G30650,AT3G29250,AT3G17050,AT3G03900,AT1G54290,AT3G20670,AT1G30070,AT4G34230,AT5G65870,AT5G61880,AT5G63370,AT5G49480,AT5G03240,AT1G61580,AT2G21620,AT5G64400,AT2G23620,AT5G51190,AT5G35660,AT5G36220,AT2G47180,AT5G53000,AT5G11090,AT1G11840,AT3G14560,AT5G52820,AT1G67360,AT4G01026,AT5G04340,AT2G15970,AT1G51200,AT3G06070,AT2G28510,AT3G19920,AT1G08920,AT1G68220,AT1G66280,AT2G04900,AT1G73010,AT4G30935,AT4G02570,AT4G21326,AT5G13080,AT1G14590,AT2G04400,AT4G33030,AT1G52880,AT5G09970,AT3G42130,AT1G72180,AT5G63600,AT1G48750,AT3G07090,AT5G01320,AT5G03070,AT3G16770,AT3G47570,AT1G75600,AT1G22360,AT2G17280,AT4G26010,AT1G08800,AT5G01740,AT1G19180,AT2G26440,AT1G75680,AT4G34950,AT4G37530,AT5G42570,AT5G62360,AT1G64105,AT4G34870,AT5G05630,AT5G19740,AT3G62700,AT1G72330,AT2G28900,AT5G54940,AT3G27770,AT1G27030,AT3G46010,AT5G05960,AT2G25950,AT2G46680,AT1G66410,AT4G32020,AT5G57220,AT4G00165,AT5G13040,AT2G22080,AT5G66110,AT2G38380,AT5G39760,AT1G21760,AT2G21150,AT2G47890,AT4G32050,AT2G26810,AT1G02860,AT5G65670,AT1G23110,AT3G17390,AT3G25640,AT3G28270,AT1G26970,AT2G31390,AT4G00820,AT2G23610,AT3G62740,AT1G15230,AT2G37640,AT5G39580,AT1G19140,AT5G13200,AT3G27230,AT3G55200,AT5G44360,AT1G52070,AT4G35630,AT5G08380,AT3G50440,AT5G20150,AT1G52410,AT5G13310,AT5G28030,AT4G01000,AT3G04640,AT1G71170,AT4G15390,AT5G24780,AT1G69530,AT1G16840,AT5G62580,AT5G62740,AT5G51130,AT1G07890,AT4G31500,AT1G17745,AT5G13170,AT4G01700,AT1G19540,AT3G45010,AT3G10120,AT1G77120,AT5G55530,AT4G22380,AT4G18240,AT3G13650,AT1G65350,AT1G19910,AT2G39210,AT5G25040,AT3G52470,AT2G40140,AT5G10300,AT5G03700,AT5G04220,AT3G08030,AT3G55220,AT3G19470,AT4G39980,AT3G14310,AT2G20370,AT1G69295,AT1G25540,AT5G12140,AT3G54400,AT2G37110,AT3G15660,AT1G31850,AT2G28400,AT1G53460,AT2G16700,AT2G03440,AT3G04530,AT4G19400,AT5G07900,AT2G37790,AT4G01480,AT1G21310,AT3G50260,AT1G55920,AT5G58290,AT4G01610,AT2G34790,AT2G34690,AT4G22220,AT4G11600,AT5G58070,AT1G67300,AT5G24650,AT1G02890 YOH_DREB2A_DROUGHT_STRESS_RESPONSE_DN Microarray analysis of DREB2A knockout plants subjected to 1-h drought-stress treatment. Genes with fold change of <0.5 AT5G05410,AT1G52690,AT5G15500,AT5G01600,AT2G41190,AT3G17520,AT5G24780,AT5G52300,AT1G22370,AT3G26510,AT5G54585 YOH_DREB2A_HEAT_STRESS_RESPONSE_DN Microarray analysis of DREB2A knockout plants subjected to 1-h heat-shock treatment. Genes with fold change of <0.5 AT5G05410,AT2G17840,AT5G52310,AT5G24780,AT1G75860,AT5G15970,AT2G21180,AT4G36010,AT2G41090,AT2G41100,AT5G24770,AT5G54170,AT1G10170,AT2G23120,AT1G27730,AT5G03720,AT4G02890,AT2G23340,AT5G64310,AT5G04340,AT4G03430,AT3G50970,AT4G01026,AT3G50480,AT5G01600,AT1G09070,AT1G52400,AT3G22060,AT4G21570,AT5G61810,AT2G21490,AT5G57560,AT3G22740,AT1G20450,AT2G25510,AT3G21930,AT3G21920,AT1G20823,AT1G01470,AT2G13800,AT5G42530,AT1G20100,AT5G12940,AT2G42540,AT5G51720,AT4G18280,AT1G20440,AT2G29670,AT2G33380,AT1G66500